RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GK5 (Homo sapiens)

Ensembl gene IDs: ENSG00000175066

Ensembl transcript IDs: ENST00000392993.7, ENST00000460544.5, ENST00000460630.1, ENST00000463349.1, ENST00000466685.7, ENST00000472759.5, ENST00000480757.5, ENST00000487672.1, ENST00000489085.1, ENST00000492097.5

Found 517 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCATGTGAAACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTaGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCT +
Preference number: 1 (lower is better)
Translates to: ACETVLVAPCGSLAE*LKGNPEHRHTLLPS
Trigger: AGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGTTTCACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR GCA 90 bp CTAACTGCTGAGCCCATTTTATGGCAGTACCAGTGTCTCCTGCATTaGTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAA +
Preference number: 1 (lower is better)
Translates to: LTAEPILWQYQCLLH*FQLSIRLLAQSSTQ
Trigger: TTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAAATGGGCTCAGCAGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR CCA 90 bp TCCAAAAATGTCCCAGTTCCCATGGTTAATTTCACATCACCTGTCTaGAAGCAGCACTCTCCAAACATGGCTGATTGCTGGTCAGCAACC +
Preference number: 1 (lower is better)
Translates to: SKNVPVPMVNFTSPV*KQHSPNMADCWSAT
Trigger: GGTTGCTGACCAGCAATCAGCCATGTTTGGAGAGTGCTGCTTCCAGACAGGTGATGTGAAATTAACCATGGGAACTGGGACATTTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR TCA 90 bp TTGGAAGGTGGGGTCAACTGCCTTAGGACAATTCTACATCCAGCTTaGCACTACTCACGACTTACTCCTCCTCACTGTTTCTTCCAAGAA +
Preference number: 1 (lower is better)
Translates to: LEGGVNCLRTILHPA*HYSRLTPPHCFFQE
Trigger: TTCTTGGAAGAAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTCCTAAGGCAGTTGACCCCACCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR CCA 90 bp GTTCGAACCAGAAGACCTGGCTTTGGGTTTACAATAAGACGATTCTaGGACCAAGTAGGTTGTAAAGGCCCAAGGTATGTTTGGGGCTTT +
Preference number: 1 (lower is better)
Translates to: VRTRRPGFGFTIRRF*DQVGCKGPRYVWGF
Trigger: AAAGCCCCAAACATACCTTGGGCCTTTACAACCTACTTGGTCCCAGAATCGTCTTATTGTAAACCCAAAGCCAGGTCTTCTGGTTCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR GCA 90 bp GATAATGATTTTGTAACTTGGAAATTAAATTCCCTTTCCCTCAGCTaGTCCCCCAGCTACTGTGGAGACTGCACATCTTGCAACAGGTGG +
Preference number: 1 (lower is better)
Translates to: DNDFVTWKLNSLSLS*SPSYCGDCTSCNRW
Trigger: CCACCTGTTGCAAGATGTGCAGTCTCCACAGTAGCTGGGGGAGCAGCTGAGGGAAAGGGAATTTAATTTCCAAGTTACAAAATCATTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR TCA 90 bp GCAGGTCAAATCAAAGATGATCTGCAGAATACATTAACCCTACACTaGAATCATGGACCTACTCCAGTAATTAAGGCTGCAGAGGTGGGG +
Preference number: 1 (lower is better)
Translates to: AGQIKDDLQNTLTLH*NHGPTPVIKAAEVG
Trigger: CCCCACCTCTGCAGCCTTAATTACTGGAGTAGGTCCATGATTTCAGTGTAGGGTTAATGTATTCTGCAGATCATCTTTGATTTGACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR GCA 90 bp AGGATAAACAGAATGGTTGAAATAAGAAATAGTGACAACACCAAATaGTGGCGAGCATGCAGAGAAACTGGATCACTCATACATTCCTGG +
Preference number: 1 (lower is better)
Translates to: RINRMVEIRNSDNTK*WRACRETGSLIHSW
Trigger: CCAGGAATGTATGAGTGATCCAGTTTCTCTGCATGCTCGCCAGCATTTGGTGTTGTCACTATTTCTTATTTCAACCATTCTGTTTATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR CCA 90 bp ATAAACAGAATGGTTGAAATAAGAAATAGTGACAACACCAAATGCTaGCGAGCATGCAGAGAAACTGGATCACTCATACATTCCTGGTGG +
Preference number: 1 (lower is better)
Translates to: INRMVEIRNSDNTKC*RACRETGSLIHSWW
Trigger: CCACCAGGAATGTATGAGTGATCCAGTTTCTCTGCATGCTCGCCAGCATTTGGTGTTGTCACTATTTCTTATTTCAACCATTCTGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR GCA 90 bp CTCTTAGTCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTaGACGTCACATAAACCAGCTACCTATGGTTTTGATCATTTCATT +
Preference number: 1 (lower is better)
Translates to: LLVIVIWVIPELHLI*TSHKPATYGFDHFI
Trigger: AATGAAATGATCAAAACCATAGGTAGCTGGTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGACTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR TCA 90 bp GAACTATTAGCTTGGATGGTAAATCATTATGTTCCTATGTACCACTaGCCCAGTATAAAAAGGAAGAGGACCCATAACTGTCAAAATGTG +
Preference number: 1 (lower is better)
Translates to: ELLAWMVNHYVPMYH*PSIKRKRTHNCQNV
Trigger: CACATTTTGACAGTTATGGGTCCTCTTCCTTTTTATACTGGGTCAGTGGTACATAGGAACATAATGATTTACCATCCAAGCTAATAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR CCA 90 bp TGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATaGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACAT +
Preference number: 1 (lower is better)
Translates to: CLFLKAIDSNIARTR*YLLVEGFKPIKEAH
Trigger: ATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
3UTR CCA 90 bp AGTGTTATGTCTTGTTATACCAATTCATGGAGCGTTTCACTGCTTTaGCCCAGTTTTCCAGACTCATTTCATATTCTTGACATTTCTTCT +
Preference number: 1 (lower is better)
Translates to: SVMSCYTNSWSVSLL*PSFPDSFHILDISS
Trigger: AGAAGAAATGTCAAGAATATGAAATGAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCTCCATGAATTGGTATAACAAGACATAACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR GCA 90 bp CATTTAGTGTTATGTCTTGTTATACCAATTCATGGAGCGTTTCACTaGTTTGGCCCAGTTTTCCAGACTCATTTCATATTCTTGACATTT +
Preference number: 1 (lower is better)
Translates to: HLVLCLVIPIHGAFH*FGPVFQTHFIFLTF
Trigger: AAATGTCAAGAATATGAAATGAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCTCCATGAATTGGTATAACAAGACATAACACTAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR CCA 90 bp GTTTTGATCATTTCATTTAGTGTTATGTCTTGTTATACCAATTCATaGAGCGTTTCACTGCTTTGGCCCAGTTTTCCAGACTCATTTCAT +
Preference number: 1 (lower is better)
Translates to: VLIISFSVMSCYTNS*SVSLLWPSFPDSFH
Trigger: ATGAAATGAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCTCCATGAATTGGTATAACAAGACATAACACTAAATGAAATGATCAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTGGTGGAAGAATCACCTaGGCCCAGGAAGCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPGGRIT*AQEAEA
Trigger: AGCCTCGGCTTCCTGGGCTCAGGTGATTCTTCCACC...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR GCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTCACCCATTGGCTGGGTaGAGTGGTTCACGGCTGCAA +
Preference number: 2 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPHPLAG*SGSRLQ
Trigger: TTGCAGCCGTGAACCACTGCACCCAGCCAATGGGTG...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR CCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTCTCCCCCAGCTACTGTaGAGACTGCACATCTTGCAA +
Preference number: 2 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPLPQLL*RLHILQ
Trigger: TTGCAAGATGTGCAGTCTCCACAGTAGCTGGGGGAG...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR TCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTGGCAGGAGGACTGCTTaGGCCCAGGAGAGGGAGGTT +
Preference number: 2 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFGRRTA*AQEREV
Trigger: AACCTCCCTCTCCTGGGCTCAAGCAGTCCTCCTGCC...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR TCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGAGCTGCACCCAGGCATaGCATGTCAATGTCGGCAGG +
Preference number: 2 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGSCTQA*HVNVGR
Trigger: CCTGCCGACATTGACATGTCATGCCTGGGTGCAGCT...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGAGGCGGAGGTCACAGTaGGCCATCGGTGAGATCATG +
Preference number: 2 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGRRRSQ*AIGEIM
Trigger: CATGATCTCACCGATGGCTCACTGTGACCTCCGCCT...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATGCAGCCTCCACCTCCTaGAGCTCAAGTGATCTTCCC +
Preference number: 2 (lower is better)
Translates to: TRSHFAAQAVTELLASSDAASTS*SSSDLP
Trigger: GGGAAGATCACTTGAGCTCCAGGAGGTGGAGGCTGC...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR CCA 90 bp CAACAGGTGGTCTCTACCTCCTGCTTAAGCTGCCACAGGAAATCAAAGGCAATGGTGGTCTTGGCTACTTaGGAGGCTGGGGTGGAAGAA +
Preference number: 2 (lower is better)
Translates to: QQVVSTSCLSCHRKSKAMVVLAT*EAGVEE
Trigger: TTCTTCCACCCCAGCCTCCCAAGTAGCCAAGACCAC...CATTGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCACCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGCGTGGCACACACCTGTaGTCTTGGCTACTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGRGTHL*SWLLGR
Trigger: CCTCCCAAGTAGCCAAGACCACAGGTGTGTGCCACG...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTGTAGTGACGTATACCTaGAATCCCAGCTACTTGGGA +
Preference number: 2 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPVVTYT*NPSYLG
Trigger: TCCCAAGTAGCTGGGATTTCAGGTATACGTCACTAC...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTGAAAGTCTAAGCATGTaGAACTGTCCTTGTTGCTCC +
Preference number: 2 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPESLSM*NCPCCS
Trigger: GGAGCAACAAGGACAGTTTCACATGCTTAGACTTTC...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR CCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTAAAGTGAAAACATGTTaGAAGGTGGGGTCAACTGCC +
Preference number: 2 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPKVKTC*KVGSTA
Trigger: GGCAGTTGACCCCACCTTCCAACATGTTTTCACTTT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR CCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATAGCCTCCTGACTAGCTaGGATTACAGGCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: TRSHFAAQAVTELLASSDSLLTS*DYRHVP
Trigger: TGGCACATGCCTGTAATCCCAGCTAGTCAGGAGGCT...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR TCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTACTCCTGACCTCAAATaGTCCGCCCACTTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFTPDLK*SAHFSL
Trigger: CAGGCTGAAGTGGGCGGATCATTTGAGGTCAGGAGT...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR TCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATAGGCGGAGGTCACAGTaGGCCATCGGTGAGATCATG +
Preference number: 2 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINRRRSQ*AIGEIM
Trigger: CATGATCTCACCGATGGCTCACTGTGACCTCCGCCT...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp TGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATTCCCTTTCCCTCAGCTaGTCCCCCAGCTACTGTGGA +
Preference number: 2 (lower is better)
Translates to: CFQLSIRLLAQSSTQLMDSLSLS*SPSYCG
Trigger: TCCACAGTAGCTGGGGGAGCAGCTGAGGGAAAGGGA...ATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCGTGGCACACACCTGTaGTCTTGGCTACTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHARGTHL*SWLLGR
Trigger: CCTCCCAAGTAGCCAAGACCACAGGTGTGTGCCACG...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp ACATCACCTGTCTGGAAGCAGCACTCTCCAAACATGGCTGATTGCTGGTCAGCATATGTGCATGGTACTTaGCCCAGAACTATTAGCTTG +
Preference number: 2 (lower is better)
Translates to: TSPVWKQHSPNMADCWSAYVHGT*PRTISL
Trigger: CAAGCTAATAGTTCTGGGTCAAGTACCATGCACATA...TGCTGACCAGCAATCAGCCATGTTTGGAGAGTGCTGCTTCCAGACAGGTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR TCA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTAAGCCGAGGCTGCAGTaGGGCATGATTATACCACTG +
Preference number: 2 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSKPRLQ*GMIIPL
Trigger: CAGTGGTATAATCATGCCTCACTGCAGCCTCGGCTT...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTACAGTGAGCCATCGGTaGGATCATGCCATTGCACTC +
Preference number: 2 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSTVSHR*DHAIAL
Trigger: GAGTGCAATGGCATGATCTCACCGATGGCTCACTGT...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATGGGATTACAGGCATGTaGCACAACGCACAGCTAATT +
Preference number: 2 (lower is better)
Translates to: TRSHFAAQAVTELLASSDGITGM*HNAQLI
Trigger: AATTAGCTGTGCGTTGTGGCACATGCCTGTAATCCC...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR TCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTGGTGGGAGGATCACTTaGGGCCAGGAATTAAAGACT +
Preference number: 2 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFGGRIT*GQELKT
Trigger: AGTCTTTAATTCCTGGCCTCAAGTGATCCTCCCACC...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR TCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTAGCTGCACCCAGGCATaGCATGTCAATGTCGGCAGG +
Preference number: 2 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLSCTQA*HVNVGR
Trigger: CCTGCCGACATTGACATGTCATGCCTGGGTGCAGCT...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGCACCTATGCCTAGATTaGATAAGACCGATCCTCTCT +
Preference number: 2 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGHLCLD*IRPILS
Trigger: AGAGAGGATCGGTCTTATTCAATCTAGGCATAGGTG...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGGAAGGTGGGGTCAACTaGCTTAGGACAATTCTACAT +
Preference number: 2 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGEGGVN*LRTILH
Trigger: ATGTAGAATTGTCCTAAGGCAGTTGACCCCACCTTC...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR GCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAATCCCTTTCCCTCAGCTaGTCCCCCAGCTACTGTGGA +
Preference number: 2 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKSLSLS*SPSYCG
Trigger: TCCACAGTAGCTGGGGGAGCAGCTGAGGGAAAGGGA...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATCCATCGGTGAGATCATaGCATTGCACTCCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINPSVRS*HCTPVW
Trigger: CCAGACTGGAGTGCAATGGCATGATCTCACCGATGG...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp TGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATCCATCGGTGAGATCATaGCATTGCACTCCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: CFQLSIRLLAQSSTQLMDPSVRS*HCTPVW
Trigger: CCAGACTGGAGTGCAATGGCATGATCTCACCGATGG...ATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCTCCCCCAGCTACTGTaGAGACTGCACATCTTGCAA +
Preference number: 2 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHALPQLL*RLHILQ
Trigger: TTGCAAGATGTGCAGTCTCCACAGTAGCTGGGGGAG...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGCTGTGGATCTCTGGCTaGGTGGCTAAAGGGCAATCC +
Preference number: 2 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRLWISG*VAKGQS
Trigger: GGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAG...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR TCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTATAGCCACTGACACTTaGGGAGATGCTCAATTCCGA +
Preference number: 2 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFIATDT*GDAQFR
Trigger: TCGGAATTGAGCATCTCCTCAAGTGTCAGTGGCTAT...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR TCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTCTCATTAATCAGGTCTaGAGTCATCTGCATGACAAA +
Preference number: 2 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCLINQV*SHLHDK
Trigger: TTTGTCATGCAGATGACTTCAGACCTGATTAATGAG...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR TCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGTCTCAGCAGCATCTGTaGAAAGGTCTGCAAAAACAA +
Preference number: 2 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGSQQHL*KGLQKQ
Trigger: TTGTTTTTGCAGACCTTTTCACAGATGCTGCTGAGA...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492097.5
3UTR-3UTR GCA 90 bp ACATCACCTGTCTGGAAGCAGCACTCTCCAAACATGGCTGATTGCTGGTCAGCAAGGTCTGAAGTCATCTaGATGACAAAACCATTCTTA +
Preference number: 2 (lower is better)
Translates to: TSPVWKQHSPNMADCWSARSEVI*MTKPFL
Trigger: TAAGAATGGTTTTGTCATGCAGATGACTTCAGACCT...TGCTGACCAGCAATCAGCCATGTTTGGAGAGTGCTGCTTCCAGACAGGTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp TGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATGTGGTCTCTACCTCCTaGTTAAGCTGCCACAGGAAA +
Preference number: 2 (lower is better)
Translates to: CFQLSIRLLAQSSTQLMDVVSTS*LSCHRK
Trigger: TTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCAC...ATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGAGACTGCACATCTTaGAACAGGTGGTCTCTACCT +
Preference number: 2 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINGDCTS*NRWSLP
Trigger: AGGTAGAGACCACCTGTTGCAAGATGTGCAGTCTCC...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCAGCTACTGTGGAGACTaGACATCTTGCAACAGGTGG +
Preference number: 2 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHASYCGD*TSCNRW
Trigger: CCACCTGTTGCAAGATGTGCAGTCTCCACAGTAGCT...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTGTGGTCTTGGCTACTTaGGAGGCTGGGGTGGAAGAA +
Preference number: 2 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLVVLAT*EAGVEE
Trigger: TTCTTCCACCCCAGCCTCCCAAGTAGCCAAGACCAC...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTTTCACATCACCTGTCTaGAAGCAGCACTCTCCAAAC +
Preference number: 2 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFFTSPV*KQHSPN
Trigger: GTTTGGAGAGTGCTGCTTCCAGACAGGTGATGTGAA...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR CCA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTTTCACATCACCTGTCTaGAAGCAGCACTCTCCAAAC +
Preference number: 2 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSFTSPV*KQHSPN
Trigger: GTTTGGAGAGTGCTGCTTCCAGACAGGTGATGTGAA...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAGTTTCTGAAAGCTATTaGCTCCAATATTGCTCGTAC +
Preference number: 2 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLVSESY*LQYCSY
Trigger: GTACGAGCAATATTGGAGTCAATAGCTTTCAGAAAC...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGATTTCTTCTGTGGCTTaGAAACCACTTCACTTTGTC +
Preference number: 2 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGISSVA*KPLHFV
Trigger: GACAAAGTGAAGTGGTTTTCAAGCCACAGAAGAAAT...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTGAGCTTCATCTCATCTaGACGTCACATAAACCAGCT +
Preference number: 2 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFELHLI*TSHKPA
Trigger: AGCTGGTTTATGTGACGTGCAGATGAGATGAAGCTC...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR GCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTTTTTGGAACAATATGTaGATGGTACTTGACCCAGAA +
Preference number: 2 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCFWNNM*MVLDPE
Trigger: TTCTGGGTCAAGTACCATGCACATATTGTTCCAAAA...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR GCA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTCCAAACATGGCTGATTaGTGGTCAGCAACCTATAGT +
Preference number: 2 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSPNMAD*WSATYS
Trigger: ACTATAGGTTGCTGACCAGCAATCAGCCATGTTTGG...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATGGAACAATATGTGCATaGTACTTGACCCAGAACTAT +
Preference number: 2 (lower is better)
Translates to: TRSHFAAQAVTELLASSDGTICA*YLTQNY
Trigger: ATAGTTCTGGGTCAAGTACCATGCACATATTGTTCC...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR CCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGGGATCTCTGGCTGAGTaGCTAAAGGGCAATCCTGAG +
Preference number: 2 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRGSLAE*LKGNPE
Trigger: CTCAGGATTGCCCTTTAGCCACTCAGCCAGAGATCC...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR CCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGATTACACCCATTGGCTaGGTGCAGTGGTTCACGGCT +
Preference number: 2 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRITPIG*VQWFTA
Trigger: AGCCGTGAACCACTGCACCCAGCCAATGGGTGTAAT...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR TCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTCATATGGGTTATCCCTaGGCTTCATCTCATCTGCAC +
Preference number: 2 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIHMGYP*ASSHLH
Trigger: GTGCAGATGAGATGAAGCTCAGGGATAACCCATATG...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR TCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTTATGTGCATGGTACTTaGCCCAGAACTATTAGCTTG +
Preference number: 2 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFYVHGT*PRTISL
Trigger: CAAGCTAATAGTTCTGGGTCAAGTACCATGCACATA...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR TCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGAAAGTCTAAGCATGTaGAACTGTCCTTGTTGCTCC +
Preference number: 2 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINESLSM*NCPCCS
Trigger: GGAGCAACAAGGACAGTTTCACATGCTTAGACTTTC...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR TCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTATTCTACATCCAGCTTaGCACTACTCACGACTTACT +
Preference number: 2 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFILHPA*HYSRLT
Trigger: AGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAAT...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR TCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTCTCTCCAAACATGGCTaGTTGCTGGTCAGCAACCTA +
Preference number: 2 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLLSKHG*LLVSNL
Trigger: TAGGTTGCTGACCAGCAATCAGCCATGTTTGGAGAG...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp AAAAAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAATGCCCAAGCTGGTCTTaGACTTCTGGCCTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: KKSFTSSEKVKHSARTVKCPSWS*TSGLKQ
Trigger: TTGCTTGAGGCCAGAAGTTCAAGACCAGCTTGGGCA...TTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487672.1
3UTR-3UTR GCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTAGCTACTGTGGAGACTaGACATCTTGCAACAGGTGG +
Preference number: 2 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLSYCGD*TSCNRW
Trigger: CCACCTGTTGCAAGATGTGCAGTCTCCACAGTAGCT...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTGTGAGATCATGCCATTaGACTCCAGTCTGGGAGACA +
Preference number: 2 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLVRSCH*TPVWET
Trigger: TGTCTCCCAGACTGGAGTGCAATGGCATGATCTCAC...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp AAAAAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAACTCAAGCAATCCCCCTaGCTCAGCCTTCCAAAGTGT +
Preference number: 2 (lower is better)
Translates to: KKSFTSSEKVKHSARTVKLKQSP*LSLPKC
Trigger: ACACTTTGGAAGGCTGAGGCAGGGGGATTGCTTGAG...TTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000487672.1
3UTR-3UTR CCA 90 bp CCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATCAGGATTGCTCGTACAAGATaGTATTTACTGGTAGAAGGC +
Preference number: 2 (lower is better)
Translates to: PRHDMSMSAGLSIFSLIRIARTR*YLLVEG
Trigger: GCCTTCTACCAGTAAATACCATCTTGTACGAGCAAT...CCTGATTAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CCA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTATGTCCCAGTTCCCATaGTTAATTTCACATCACCTG +
Preference number: 2 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSMSQFP*LISHHL
Trigger: CAGGTGATGTGAAATTAACCATGGGAACTGGGACAT...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTGAGGGGCAAATAAAGTaGAAACATGTTGGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIEGQIK*KHVGRW
Trigger: CCACCTTCCAACATGTTTTCACTTTATTTGCCCCTC...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR GCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTGAGCTTCATCTCATCTaGACGTCACATAAACCAGCT +
Preference number: 2 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIELHLI*TSHKPA
Trigger: AGCTGGTTTATGTGACGTGCAGATGAGATGAAGCTC...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR GCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTACCTCCTGCTTAAGCTaGCACAGGAAATCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLTSCLS*HRKSKA
Trigger: TGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGT...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATTTTGTGGTTATATGTTaGGAAAGAAGAACGTGGAAA +
Preference number: 2 (lower is better)
Translates to: TRSHFAAQAVTELLASSDFVVIC*ERRTWK
Trigger: TTTCCACGTTCTTCTTTCCCAACATATAACCACAAA...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR CCA 90 bp TGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATATGTCCCAGTTCCCATaGTTAATTTCACATCACCTG +
Preference number: 2 (lower is better)
Translates to: CFQLSIRLLAQSSTQLMDMSQFP*LISHHL
Trigger: CAGGTGATGTGAAATTAACCATGGGAACTGGGACAT...ATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR CAA 90 bp GATTTTATGTGCCAAATCCTGACCAAGAGAGAAATAAAGTCATTATaGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: DFMCQILTKREIKSL*LQIQMEPNPNVGRG
Trigger: GCCCCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTATTTCTCTCTTGGTCAGGATTTGGCACATAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR TCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCTCTCATAAGCTTATCTaGGAGGGACATATTAAGCTC +
Preference number: 2 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHASHKLI*EGHIKL
Trigger: GAGCTTAATATGTCCCTCTCAGATAAGCTTATGAGA...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR TCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCGTTTCTGAAAGCTATTaGCTCCAATATTGCTCGTAC +
Preference number: 2 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHAVSESY*LQYCSY
Trigger: GTACGAGCAATATTGGAGTCAATAGCTTTCAGAAAC...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGATTTCTTCTGTGGCTTaGAAACCACTTCACTTTGTC +
Preference number: 2 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMISSVA*KPLHFV
Trigger: GACAAAGTGAAGTGGTTTTCAAGCCACAGAAGAAAT...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTCCTCCAGTAGTCTGTTaGAGGCTATTTCCAGTGTTA +
Preference number: 2 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLPPVVC*RLFPVL
Trigger: TAACACTGGAAATAGCCTTCAACAGACTACTGGAGG...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp AAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAATATCTGAGGTACAAGTACTaGAGTCTACCACATACGCCT +
Preference number: 2 (lower is better)
Translates to: KSFTSSEKVKHSARTVKYLRYKY*SLPHTP
Trigger: AGGCGTATGTGGTAGACTTCAGTACTTGTACCTCAG...ATATTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487672.1
3UTR-3UTR CCA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGATTGCTCGTACAAGATaGTATTTACTGGTAGAAGGC +
Preference number: 2 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMIARTR*YLLVEG
Trigger: GCCTTCTACCAGTAAATACCATCTTGTACGAGCAAT...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTAACATGGCTGATTGCTaGTCAGCAACCTATAGTCCT +
Preference number: 2 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLNMADC*SATYSP
Trigger: AGGACTATAGGTTGCTGACCAGCAATCAGCCATGTT...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTTTGACATTTCTTCTGTaGCTTGAAAACCACTTCACT +
Preference number: 2 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFLTFLL*LENHFT
Trigger: AGTGAAGTGGTTTTCAAGCCACAGAAGAAATGTCAA...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR TCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATCATATGGGTTATCCCTaGGCTTCATCTCATCTGCAC +
Preference number: 2 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYHMGYP*ASSHLH
Trigger: GTGCAGATGAGATGAAGCTCAGGGATAACCCATATG...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR TCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTTCTCATAAGCTTATCTaGGAGGGACATATTAAGCTC +
Preference number: 2 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNISHKLI*EGHIKL
Trigger: GAGCTTAATATGTCCCTCTCAGATAAGCTTATGAGA...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR TCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATCTGAAGTCATCTGCATaGCAAAACCATTCTTACAAA +
Preference number: 2 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINLKSSA*QNHSYK
Trigger: TTTGTAAGAATGGTTTTGTCATGCAGATGACTTCAG...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCAGGTCTGAAGTCATCTaGATGACAAAACCATTCTTA +
Preference number: 2 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHARSEVI*MTKPFL
Trigger: TAAGAATGGTTTTGTCATGCAGATGACTTCAGACCT...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp TGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAGGTCTGAAGTCATCTaGATGACAAAACCATTCTTA +
Preference number: 2 (lower is better)
Translates to: CFQLSIRLLAQSSTQLMDRSEVI*MTKPFL
Trigger: TAAGAATGGTTTTGTCATGCAGATGACTTCAGACCT...ATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTCTCATTAATCAGGTCTaGAGTCATCTGCATGACAAA +
Preference number: 2 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLLINQV*SHLHDK
Trigger: TTTGTCATGCAGATGACTTCAGACCTGATTAATGAG...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAAATTTCTTCTGTGGCTTaGAAACCACTTCACTTTGTC +
Preference number: 2 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKISSVA*KPLHFV
Trigger: GACAAAGTGAAGTGGTTTTCAAGCCACAGAAGAAAT...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR TCA 90 bp AAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAATATATTCTCACTAACATGTaGAACTCTGGTCCACCACAA +
Preference number: 2 (lower is better)
Translates to: KSFTSSEKVKHSARTVKYILTNM*NSGPPQ
Trigger: TTGTGGTGGACCAGAGTTTCACATGTTAGTGAGAAT...ATATTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487672.1
3UTR-3UTR GCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAATCTGCTAGTTTAAGTTaGCCTAACACTGTTTGTGGT +
Preference number: 2 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKSASLS*PNTVCG
Trigger: ACCACAAACAGTGTTAGGGCAACTTAAACTAGCAGA...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTTTAGTCATTGTCATATaGGTTATCCCTGAGCTTCAT +
Preference number: 2 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNILVIVI*VIPELH
Trigger: ATGAAGCTCAGGGATAACCCATATGACAATGACTAA...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR TCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGGAAGATATAAAGTTTTaGGGTATTGCTGCCTTACCA +
Preference number: 2 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGREDIKF*GIAALP
Trigger: TGGTAAGGCAGCAATACCTCAAAACTTTATATCTTC...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR TCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTCTGAAGTCATCTGCATaGCAAAACCATTCTTACAAA +
Preference number: 2 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLLKSSA*QNHSYK
Trigger: TTTGTAAGAATGGTTTTGTCATGCAGATGACTTCAG...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR GCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTTTTGGAACAATATGTaGATGGTACTTGACCCAGAA +
Preference number: 2 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLFWNNM*MVLDPE
Trigger: TTCTGGGTCAAGTACCATGCACATATTGTTCCAAAA...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR CCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGTTAGTCATTGTCATATaGGTTATCCCTGAGCTTCAT +
Preference number: 2 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRLVIVI*VIPELH
Trigger: ATGAAGCTCAGGGATAACCCATATGACAATGACTAA...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR CAA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTAGGCAGAAGAGTCACTaGAACCCGAGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPRQKSH*NPRGGG
Trigger: ACCTCCGCCTCTCGGGTTCAAGTGACTCTTCTGCCT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR TCA 72 bp GACAGGGTTTCACCGTGTTTGACCAGGTTGGACTCCTaGCCTCAAATGATCCGCCCACTTCAGCCTGCCAAA +
Preference number: 3 (lower is better)
Translates to: DRVSPCLTRLDS*PQMIRPLQPAK
Trigger: TTTGGCAGGCTGAAGTGGGCGGATCATTTGAGGTCAGGAGTCCAACCTGGTCAAACACGGTGAAACCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR CAA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTTGGAGACTGCACATCTaGCAACAGGTGGTCTCTACC +
Preference number: 3 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPWRLHI*QQVVST
Trigger: GGTAGAGACCACCTGTTGCAAGATGTGCAGTCTCCA...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR CAA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATTACAGTGACACCAACTaGGCTCACTGCAGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: TRSHFAAQAVTELLASSDYSDTN*AHCSLH
Trigger: GTGGAGGCTGCAGTGAGCCAAGTTGGTGTCACTGTA...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR CAA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGGTGAAACTGTCCTTGTaGCTCCCTGTGGATCTCTGG +
Preference number: 3 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGVKLSL*LPVDLW
Trigger: CCAGAGATCCACAGGGAGCAACAAGGACAGTTTCAC...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR CCA 72 bp GTCCCAGTTCCCATGGTTAATTTCACATCACCTGTCTaGAAGCAGCACTCTCCAAACATGGCTGATTGCTGG +
Preference number: 3 (lower is better)
Translates to: VPVPMVNFTSPV*KQHSPNMADCW
Trigger: CCAGCAATCAGCCATGTTTGGAGAGTGCTGCTTCCAGACAGGTGATGTGAAATTAACCATGGGAACTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CAA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTAATTCTACATCCAGCTaGACACTACTCACGACTTAC +
Preference number: 3 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPNSTSS*TLLTTY
Trigger: GTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR CAA 90 bp ACATCACCTGTCTGGAAGCAGCACTCTCCAAACATGGCTGATTGCTGGTCAGCACCCCATCACTGTGTTTaGTCTCAGAGTACCAAATGT +
Preference number: 3 (lower is better)
Translates to: TSPVWKQHSPNMADCWSAPHHCV*SQSTKC
Trigger: ACATTTGGTACTCTGAGACAAAACACAGTGATGGGG...TGCTGACCAGCAATCAGCCATGTTTGGAGAGTGCTGCTTCCAGACAGGTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CAA 90 bp TGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATTGTGGTCTTGGCTACTaGGGAGGCTGGGGTGGAAGA +
Preference number: 3 (lower is better)
Translates to: CFQLSIRLLAQSSTQLMDCGLGY*GGWGGR
Trigger: TCTTCCACCCCAGCCTCCCAAGTAGCCAAGACCACA...ATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CAA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGTGTGGTCTTGGCTACTaGGGAGGCTGGGGTGGAAGA +
Preference number: 3 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMCGLGY*GGWGGR
Trigger: TCTTCCACCCCAGCCTCCCAAGTAGCCAAGACCACA...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR TCA 72 bp GGGGTCAACTGCCTTAGGACAATTCTACATCCAGCTTaGCACTACTCACGACTTACTCCTCCTCACTGTTTC +
Preference number: 3 (lower is better)
Translates to: GVNCLRTILHPA*HYSRLTPPHCF
Trigger: GAAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTCCTAAGGCAGTTGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR GCA 72 bp AGCACAGTGCTAAGTTCTGGGGAAGCAGACAGTTTCTaGTTTCAGGGAGCTTCCAGTCTGGTAGAGATTTAC +
Preference number: 3 (lower is better)
Translates to: STVLSSGEADSF*FQGASSLVEIY
Trigger: GTAAATCTCTACCAGACTGGAAGCTCCCTGAAAGCAGAAACTGTCTGCTTCCCCAGAACTTAGCACTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR CAA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATATGAAATTACACCCATaGGCTGGGTGCAGTGGTTCA +
Preference number: 3 (lower is better)
Translates to: TRSHFAAQAVTELLASSDMKLHP*AGCSGS
Trigger: TGAACCACTGCACCCAGCCAATGGGTGTAATTTCAT...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR CAA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGCACACACCTGTGGTCTaGGCTACTTGGGAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRHTPVV*ATWEAG
Trigger: CCCAGCCTCCCAAGTAGCCAAGACCACAGGTGTGTG...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR CAA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTCACACACCTGTGGTCTaGGCTACTTGGGAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLHTPVV*ATWEAG
Trigger: CCCAGCCTCCCAAGTAGCCAAGACCACAGGTGTGTG...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CAA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTAGAAGATATAAAGTTTaGAGGTATTGCTGCCTTACC +
Preference number: 3 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPRRYKV*RYCCLT
Trigger: GGTAAGGCAGCAATACCTCAAAACTTTATATCTTCT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR CAA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTACTGTCAAAATGTGGTaGGAAATGACTAATGTCCTT +
Preference number: 3 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPTVKMW*EMTNVL
Trigger: AAGGACATTAGTCATTTCCAACCACATTTTGACAGT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR CAA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTACCCCATCACTGTGTTTaGTCTCAGAGTACCAAATGT +
Preference number: 3 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLPHHCV*SQSTKC
Trigger: ACATTTGGTACTCTGAGACAAAACACAGTGATGGGG...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR GCA 72 bp GAGCCCATTTTATGGCAGTACCAGTGTCTCCTGCATTaGTTTCAGCTAAGCATACGACTTCTTGCCCAATCT +
Preference number: 3 (lower is better)
Translates to: EPILWQYQCLLH*FQLSIRLLAQS
Trigger: AGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAAATGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR CCA 72 bp TGGGACCAAGTAGGTTGTAAAGGCCCAAGGTATGTTTaGGGCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: WDQVGCKGPRYV*GFLSLSLSLSF
Trigger: AAAAGAGAGAGAGAGAGAGAGAGAGAGAAAGCCCCAAACATACCTTGGGCCTTTACAACCTACTTGGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR CCA 72 bp CCCATTTTGACTGGTTCGAACCAGAAGACCTGGCTTTaGGTTTACAATAAGACGATTCTGGGACCAAGTAGG +
Preference number: 3 (lower is better)
Translates to: PILTGSNQKTWL*VYNKTILGPSR
Trigger: CCTACTTGGTCCCAGAATCGTCTTATTGTAAACCCAAAGCCAGGTCTTCTGGTTCGAACCAGTCAAAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR CAA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTGCACCTATGCCTAGATaGAATAAGACCGATCCTCTC +
Preference number: 3 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSAPMPR*NKTDPL
Trigger: GAGAGGATCGGTCTTATTCAATCTAGGCATAGGTGC...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR GCA 72 bp GCAACACAGCAAGACCCAATTCATGGAGCGTTTCACTaGTTTGGCCCAGTTTTCCAGACTCATTTCATATTC +
Preference number: 3 (lower is better)
Translates to: ATQQDPIHGAFH*FGPVFQTHFIF
Trigger: GAATATGAAATGAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCTCCATGAATTGGGTCTTGCTGTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492097.5
3UTR-3UTR CAA 90 bp CAACAGGTGGTCTCTACCTCCTGCTTAAGCTGCCACAGGAAATCAAAGGCAATGAGAAGATATAAAGTTTaGAGGTATTGCTGCCTTACC +
Preference number: 3 (lower is better)
Translates to: QQVVSTSCLSCHRKSKAMRRYKV*RYCCLT
Trigger: GGTAAGGCAGCAATACCTCAAAACTTTATATCTTCT...CATTGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCACCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR CAA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTCTATTGACTCCAATATaGCTCGTACAAGATGGTATT +
Preference number: 3 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCLLTPI*LVQDGI
Trigger: AATACCATCTTGTACGAGCAATATTGGAGTCAATAG...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR GCA 72 bp ATAAGAAATAGTGACAACACCAAATGCTGGCGAGCATaGAGAGAAACTGGATCACTCATACATTCCTGGTGG +
Preference number: 3 (lower is better)
Translates to: IRNSDNTKCWRA*RETGSLIHSWW
Trigger: CCACCAGGAATGTATGAGTGATCCAGTTTCTCTGCATGCTCGCCAGCATTTGGTGTTGTCACTATTTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR CCA 72 bp AGAAGACCTGGCTTTGGGTTTACAATAAGACGATTCTaGGACCAAGTAGGTTGTAAAGGCCCAAGGTATGTT +
Preference number: 3 (lower is better)
Translates to: RRPGFGFTIRRF*DQVGCKGPRYV
Trigger: AACATACCTTGGGCCTTTACAACCTACTTGGTCCCAGAATCGTCTTATTGTAAACCCAAAGCCAGGTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR CCA 72 bp AGATTACCCATTTTGACTGGTTCGAACCAGAAGACCTaGCTTTGGGTTTACAATAAGACGATTCTGGGACCA +
Preference number: 3 (lower is better)
Translates to: RLPILTGSNQKT*LWVYNKTILGP
Trigger: TGGTCCCAGAATCGTCTTATTGTAAACCCAAAGCCAGGTCTTCTGGTTCGAACCAGTCAAAATGGGTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR CCA 72 bp CTGGATCACTCATACATTCCTGGTGGGAATGTAAGATaGTATAGCCAGTCTGGAAAACAGTTTGGCTGTTTC +
Preference number: 3 (lower is better)
Translates to: LDHSYIPGGNVR*YSQSGKQFGCF
Trigger: GAAACAGCCAAACTGTTTTCCAGACTGGCTATACCATCTTACATTCCCACCAGGAATGTATGAGTGATCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR CCA 72 bp ACAGCAAGACCCAATTCATGGAGCGTTTCACTGCTTTaGCCCAGTTTTCCAGACTCATTTCATATTCTTGAC +
Preference number: 3 (lower is better)
Translates to: TARPNSWSVSLL*PSFPDSFHILD
Trigger: GTCAAGAATATGAAATGAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCTCCATGAATTGGGTCTTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492097.5
3UTR-3UTR CAA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGCATGTGAAACTGTCCTaGTTGCTCCCTGTGGATCTC +
Preference number: 3 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRHVKLS*LLPVDL
Trigger: GAGATCCACAGGGAGCAACAAGGACAGTTTCACATG...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR CCA 72 bp CATAGTCTAAATTTCCCAAAGGGATTCAGAATCCTTTaGGGTACATTCAAGTCTTCTAGGCCATCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: HSLNFPKGFRIL*GTFKSSRPSLG
Trigger: TCCCAGAGATGGCCTAGAAGACTTGAATGTACCCCAAAGGATTCTGAATCCCTTTGGGAAATTTAGACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR-3UTR CAA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGGCACCTATGCCTAGATaGAATAAGACCGATCCTCTC +
Preference number: 3 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRAPMPR*NKTDPL
Trigger: GAGAGGATCGGTCTTATTCAATCTAGGCATAGGTGC...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR-3UTR CAA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTGCCTCCAGTAGTCTGTaGAAGGCTATTTCCAGTGTT +
Preference number: 3 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLASSSL*KAISSV
Trigger: AACACTGGAAATAGCCTTCAACAGACTACTGGAGGC...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR GCA 72 bp ATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTaGACGTCACATAAACCAGCTACCTATGGTTTTGAT +
Preference number: 3 (lower is better)
Translates to: IVIWVIPELHLI*TSHKPATYGFD
Trigger: ATCAAAACCATAGGTAGCTGGTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
3UTR-3UTR CAA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTCTATTGACTCCAATATaGCTCGTACAAGATGGTATT +
Preference number: 3 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSLLTPI*LVQDGI
Trigger: AATACCATCTTGTACGAGCAATATTGGAGTCAATAG...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR-3UTR CAA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTAATTCTACATCCAGCTaGACACTACTCACGACTTAC +
Preference number: 3 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLNSTSS*TLLTTY
Trigger: GTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATT...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR TCA 72 bp TTCTCAAGGACAGAAACACAAATTCTCACTAACATGTaGAACTCTGGTCCACCACAAACCTCCTTAGAACTT +
Preference number: 3 (lower is better)
Translates to: FSRTETQILTNM*NSGPPQTSLEL
Trigger: AAGTTCTAAGGAGGTTTGTGGTGGACCAGAGTTTCACATGTTAGTGAGAATTTGTGTTTCTGTCCTTGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487672.1
3UTR GCA 72 bp AGAATGGTTGAAATAAGAAATAGTGACAACACCAAATaGTGGCGAGCATGCAGAGAAACTGGATCACTCATA +
Preference number: 3 (lower is better)
Translates to: RMVEIRNSDNTK*WRACRETGSLI
Trigger: TATGAGTGATCCAGTTTCTCTGCATGCTCGCCAGCATTTGGTGTTGTCACTATTTCTTATTTCAACCATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR CCA 72 bp ATGGTTGAAATAAGAAATAGTGACAACACCAAATGCTaGCGAGCATGCAGAGAAACTGGATCACTCATACAT +
Preference number: 3 (lower is better)
Translates to: MVEIRNSDNTKC*RACRETGSLIH
Trigger: ATGTATGAGTGATCCAGTTTCTCTGCATGCTCGCCAGCATTTGGTGTTGTCACTATTTCTTATTTCAACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
3UTR CCA 72 bp TCTTGTTATACCAATTCATGGAGCGTTTCACTGCTTTaGCCCAGTTTTCCAGACTCATTTCATATTCTTGAC +
Preference number: 3 (lower is better)
Translates to: SCYTNSWSVSLL*PSFPDSFHILD
Trigger: GTCAAGAATATGAAATGAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCTCCATGAATTGGTATAACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR GCA 72 bp TTATGTCTTGTTATACCAATTCATGGAGCGTTTCACTaGTTTGGCCCAGTTTTCCAGACTCATTTCATATTC +
Preference number: 3 (lower is better)
Translates to: LCLVIPIHGAFH*FGPVFQTHFIF
Trigger: GAATATGAAATGAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCTCCATGAATTGGTATAACAAGACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR CCA 72 bp ATTTCATTTAGTGTTATGTCTTGTTATACCAATTCATaGAGCGTTTCACTGCTTTGGCCCAGTTTTCCAGAC +
Preference number: 3 (lower is better)
Translates to: ISFSVMSCYTNS*SVSLLWPSFPD
Trigger: GTCTGGAAAACTGGGCCAAAGCAGTGAAACGCTCCATGAATTGGTATAACAAGACATAACACTAAATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480757.5
3UTR CCA 72 bp CTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATaGTATTTACTGGTAGAAGGCTTCAAACCCATAAAA +
Preference number: 3 (lower is better)
Translates to: LKAIDSNIARTR*YLLVEGFKPIK
Trigger: TTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTAGCCTCCCGAGTAGCTaGGAGTACAGGCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPSLPSS*EYRHPP
Trigger: TGGCGGGTGCCTGTACTCCCAGCTACTCGGGAGGCT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATTCTGCTCCGGGTCCGTaGGCAGCCCCGACATCCCGA +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDSAPGP*AAPTSR
Trigger: TCGGGATGTCGGGGCTGCTCACGGACCCGGAGCAGA...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp TTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGTCATTTGGGTACCGCGGCTCCTaGGCTCTCTGCTCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLVEGFKPIKEAHAQGSFGYRGS*ALCSGS
Trigger: GGACCCGGAGCAGAGAGCGCAGGAGCCGCGGTACCC...AAATGACCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR CAA 72 bp CAGCTGCTCCCCCAGCTACTGTGGAGACTGCACATCTaGCAACAGGTGGTCTCTACCTCCTGCTTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QLLPQLLWRLHI*QQVVSTSCLSC
Trigger: GCAGCTTAAGCAGGAGGTAGAGACCACCTGTTGCAAGATGTGCAGTCTCCACAGTAGCTGGGGGAGCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTAGCTGCACCCAGGCATaGCATGTCAATGTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPSCTQA*HVNVGR
Trigger: CCTGCCGACATTGACATGTCATGCCTGGGTGCAGCT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTGGGTACCGCGGCTCCTaGGCTCTCTGCTCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFGYRGS*ALCSGS
Trigger: GGACCCGGAGCAGAGAGCGCAGGAGCCGCGGTACCC...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTCGTGGCCTCCCAAAGTaGTGGGACTACACGTGTGAG +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPRGLPK*WDYTCE
Trigger: CTCACACGTGTAGTCCCAGCACTTTGGGAGGCCACG...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTCGCCTCCTGGGTTCATaGCATTCTCTTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPRLLGS*HSLASA
Trigger: GGCTGAGGCAAGAGAATGGCATGAACCCAGGAGGCG...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp CCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATCAGGCTACCTTCTGCACGCTaGAGCCGCAGACCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: PRHDMSMSAGLSIFSLIRLPSAR*SRRPAP
Trigger: CGGCGCGGGTCTGCGGCTCCAGCGTGCAGAAGGTAG...CCTGATTAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATGGCAGGAGGACTGCTTaGGCCCAGGAGAGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDGRRTA*AQEREV
Trigger: AACCTCCCTCTCCTGGGCTCAAGCAGTCCTCCTGCC...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTATGGTCTCGATCTCCTaGCCTCGTGATCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCMVSIS*PRDPPA
Trigger: GGCTGGCGGATCACGAGGTCAGGAGATCGAGACCAT...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTCGCTACAAATCCCAATaGTCCAGAGTCCCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCRYKSQ*SRVPGR
Trigger: CCGCCCGGGGACTCTGGAGCATTGGGATTTGTAGCG...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp TGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATGGGTACCGCGGCTCCTaGGCTCTCTGCTCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: CFQLSIRLLAQSSTQLMDGYRGS*ALCSGS
Trigger: GGACCCGGAGCAGAGAGCGCAGGAGCCGCGGTACCC...ATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTACAGTGACACCAACTTaGCTCACTGCAGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPTVTPT*LTAAST
Trigger: GGTGGAGGCTGCAGTGAGCCAAGTTGGTGTCACTGT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCTCTGCTCCGGGTCCGTaGGCAGCCCCGACATCCCGA +
Preference number: 4 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHASAPGP*AAPTSR
Trigger: TCGGGATGTCGGGGCTGCTCACGGACCCGGAGCAGA...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTGATCTCCTGACCTCGTaGTCCGCCAGCCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFDLLTS*SASRGL
Trigger: GAGGCCACGGCTGGCGGATCACGAGGTCAGGAGATC...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACGGCTCCTGCGCTCTCTaGTCCGGGTCCGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINGSCAL*SGSVSS
Trigger: GCTGCTCACGGACCCGGAGCAGAGAGCGCAGGAGCC...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTCTCAACCGCAACCTCTaGCTCAGGGGTTCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCLNRNL*LRGSSG
Trigger: ACCGCTTGAACCCCTGAGGCAGAGGTTGCGGTTGAG...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp CAACAGGTGGTCTCTACCTCCTGCTTAAGCTGCCACAGGAAATCAAAGGCAATGTCCCTTTCCCTCAGCTaGTCCCCCAGCTACTGTGGA +
Preference number: 4 (lower is better)
Translates to: QQVVSTSCLSCHRKSKAMSLSLS*SPSYCG
Trigger: TCCACAGTAGCTGGGGGAGCAGCTGAGGGAAAGGGA...CATTGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCACCTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACCTACCTTCTGCACGCTaGAGCCGCAGACCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINLPSAR*SRRPAP
Trigger: CGGCGCGGGTCTGCGGCTCCAGCGTGCAGAAGGTAG...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTGGATCTCTGGCTGAGTaGCTAAAGGGCAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPGSLAE*LKGNPE
Trigger: CTCAGGATTGCCCTTTAGCCACTCAGCCAGAGATCC...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTATTACACCCATTGGCTaGGTGCAGTGGTTCACGGCT +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPITPIG*VQWFTA
Trigger: AGCCGTGAACCACTGCACCCAGCCAATGGGTGTAAT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTGCAGCCTCCACCTCCTaGAGCTCAAGTGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCAASTS*SSSDLP
Trigger: GGGAAGATCACTTGAGCTCCAGGAGGTGGAGGCTGC...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp CAACAGGTGGTCTCTACCTCCTGCTTAAGCTGCCACAGGAAATCAAAGGCAATGCGTGGCACACACCTGTaGTCTTGGCTACTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QQVVSTSCLSCHRKSKAMRGTHL*SWLLGR
Trigger: CCTCCCAAGTAGCCAAGACCACAGGTGTGTGCCACG...CATTGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCACCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTCTCTCCAAACATGGCTaGTTGCTGGTCAGCAACCAA +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPLSKHG*LLVSNQ
Trigger: TTGGTTGCTGACCAGCAATCAGCCATGTTTGGAGAG...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTACCAGGTTGGACTCCTaGCCTCAAATGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCTRLDS*PQMIRP
Trigger: TGGGCGGATCATTTGAGGTCAGGAGTCCAACCTGGT...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATAGCGGATCACAGAACTaGCCACATCCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDSGSQN*PHPAPA
Trigger: TGCTGGGGCTGGATGTGGGCAGTTCTGTGATCCGCT...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTGGGAATAGAAGAGCATaGCACTGTGTCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPGNRRA*HCVWLL
Trigger: GAGAAGCCAGACACAGTGGCATGCTCTTCTATTCCC...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTATCCCTTTCCCTCAGCTaGTCCCCCAGCTACTGTGGA +
Preference number: 4 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLSLSLS*SPSYCG
Trigger: TCCACAGTAGCTGGGGGAGCAGCTGAGGGAAAGGGA...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTGTGGTCTTGGCTACTTaGGAGGCTGGGGTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCVVLAT*EAGVEE
Trigger: TTCTTCCACCCCAGCCTCCCAAGTAGCCAAGACCAC...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR TCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAATCTGCTCCGGGTCCGTaGGCAGCCCCGACATCCCGA +
Preference number: 4 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKSAPGP*AAPTSR
Trigger: TCGGGATGTCGGGGCTGCTCACGGACCCGGAGCAGA...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp CCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATCAGGAGCTGCACCCAGGCATaGCATGTCAATGTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: PRHDMSMSAGLSIFSLIRSCTQA*HVNVGR
Trigger: CCTGCCGACATTGACATGTCATGCCTGGGTGCAGCT...CCTGATTAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTGTGGGGCTGGGTGGATaGAAACATCAGAAGACAATT +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPVGLGG*KHQKTI
Trigger: AATTGTCTTCTGATGTTTTCATCCACCCAGCCCCAC...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATCCAGCCTCAGCCTCCTaGGTAGCTGGGAATAGAAGA +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDPASAS*VAGNRR
Trigger: TCTTCTATTCCCAGCTACTCAGGAGGCTGAGGCTGG...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTGGTGGAAGAATCACCTaGGCCCAGGAAGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSGGRIT*AQEAEA
Trigger: AGCCTCGGCTTCCTGGGCTCAGGTGATTCTTCCACC...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp CCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATCAGGAGGCGGAGGTCACAGTaGGCCATCGGTGAGATCATG +
Preference number: 4 (lower is better)
Translates to: PRHDMSMSAGLSIFSLIRRRRSQ*AIGEIM
Trigger: CATGATCTCACCGATGGCTCACTGTGACCTCCGCCT...CCTGATTAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp GTACAAGTACTGAAGTCTACCACATACGCCTTTGATTGGCTATTATTAAACTTCGGGTACCGCGGCTCCTaGGCTCTCTGCTCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: VQVLKSTTYAFDWLLLNFGYRGS*ALCSGS
Trigger: GGACCCGGAGCAGAGAGCGCAGGAGCCGCGGTACCC...GAAGTTTAATAATAGCCAATCAAAGGCGTATGTGGTAGACTTCAGTACTTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR CCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTCTACCTTCTGCACGCTaGAGCCGCAGACCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLLPSAR*SRRPAP
Trigger: CGGCGCGGGTCTGCGGCTCCAGCGTGCAGAAGGTAG...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTGCATGCCACTGTGTCTaGCTTCTCTGTGACTTTCTT +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPACHCV*LLCDFL
Trigger: AAGAAAGTCACAGAGAAGCCAGACACAGTGGCATGC...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGGTGGTCTTGGCTACTTaGGAGGCTGGGGTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGVVLAT*EAGVEE
Trigger: TTCTTCCACCCCAGCCTCCCAAGTAGCCAAGACCAC...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp AAAAAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAATCTGCTCCGGGTCCGTaGGCAGCCCCGACATCCCGA +
Preference number: 4 (lower is better)
Translates to: KKSFTSSEKVKHSARTVKSAPGP*AAPTSR
Trigger: TCGGGATGTCGGGGCTGCTCACGGACCCGGAGCAGA...TTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR TCA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTAGCTGCACCCAGGCATaGCATGTCAATGTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSSCTQA*HVNVGR
Trigger: CCTGCCGACATTGACATGTCATGCCTGGGTGCAGCT...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp CAACAGGTGGTCTCTACCTCCTGCTTAAGCTGCCACAGGAAATCAAAGGCAATGCTCTCCAAACATGGCTaGTTGCTGGTCAGCAACCTA +
Preference number: 4 (lower is better)
Translates to: QQVVSTSCLSCHRKSKAMLSKHG*LLVSNL
Trigger: TAGGTTGCTGACCAGCAATCAGCCATGTTTGGAGAG...CATTGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCACCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGAAGCCGAGGCTGCAGTaGGGCATGATTATACCACTG +
Preference number: 4 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGKPRLQ*GMIIPL
Trigger: CAGTGGTATAATCATGCCTCACTGCAGCCTCGGCTT...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGCGCTACAAATCCCAATaGTCCAGAGTCCCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMRYKSQ*SRVPGR
Trigger: CCGCCCGGGGACTCTGGAGCATTGGGATTTGTAGCG...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTGCAGTGTCGCTCTGTTaGCCAGGCTACAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFAVSLC*PGYSAV
Trigger: CACTGCACTGTAGCCTGGGCAACAGAGCGACACTGC...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp AAAAAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAACTACCTTCTGCACGCTaGAGCCGCAGACCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: KKSFTSSEKVKHSARTVKLPSAR*SRRPAP
Trigger: CGGCGCGGGTCTGCGGCTCCAGCGTGCAGAAGGTAG...TTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR CCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTGCTGAGCCCATTTTATaGCAGTACCAGTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCAEPIL*QYQCLL
Trigger: CAGGAGACACTGGTACTGCCATAAAATGGGCTCAGC...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTGTATTCCTGCAGCTTTaGCTGCTTCTTTTATTACGG +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPVFLQL*LLLLLR
Trigger: CCGTAATAAAAGAAGCAGTCAAAGCTGCAGGAATAC...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTAGTTGCTCTCTGTGTTaGAATGCCAAGACCAACAAT +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPSCSLC*NAKTNN
Trigger: ATTGTTGGTCTTGGCATTTCAACACAGAGAGCAACT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGAGCTGCACCCAGGCATaGCATGTCAATGTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMSCTQA*HVNVGR
Trigger: CCTGCCGACATTGACATGTCATGCCTGGGTGCAGCT...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTCATATGGGTTATCCCTaGGCTTCATCTCATCTGCAC +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCHMGYP*ASSHLH
Trigger: GTGCAGATGAGATGAAGCTCAGGGATAACCCATATG...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTTATGTGCATGGTACTTaGCCCAGAACTATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPYVHGT*PRTISL
Trigger: CAAGCTAATAGTTCTGGGTCAAGTACCATGCACATA...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTATTCTACATCCAGCTTaGCACTACTCACGACTTACT +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPILHPA*HYSRLT
Trigger: AGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAAT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTGATGCTCAATTCCGATaGGGGACATTCAAAGTTACT +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPDAQFR*GTFKVT
Trigger: AGTAACTTTGAATGTCCCTCATCGGAATTGAGCATC...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTATAGCCACTGACACTTaGGGAGATGCTCAATTCCGA +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCIATDT*GDAQFR
Trigger: TCGGAATTGAGCATCTCCTCAAGTGTCAGTGGCTAT...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTCTGGTCTCAAACTCCTaGGCTGAAGTGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFLVSNS*AEVIRL
Trigger: CAGGCGGATCACTTCAGCTCAGGAGTTTGAGACCAG...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTCTCCTGGAGCTCAAGTaGTCTTCCCACCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNILLELK*SSHLSP
Trigger: GGGGCTGAGGTGGGAAGATCACTTGAGCTCCAGGAG...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACCCTGCTTCGGTTTCCTaGGTAGCTGGGACTACAGGG +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINPASVS*VAGTTG
Trigger: CCCTGTAGTCCCAGCTACTCAGGAAACCGAAGCAGG...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCAGGCGGAGGTCACAGTaGGCCATCGGTGAGATCATG +
Preference number: 4 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHARRRSQ*AIGEIM
Trigger: CATGATCTCACCGATGGCTCACTGTGACCTCCGCCT...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATAGCGGATCACAGAACTaGCCACATCCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINSGSQN*PHPAPA
Trigger: TGCTGGGGCTGGATGTGGGCAGTTCTGTGATCCGCT...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTAGGGATTCGCCAGGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFRDSPG*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAACCTGGCGAATCCCT...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTGAAGCAGACAGTTTCTaGTTTCAGGGAGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCEADSF*FQGASS
Trigger: ACTGGAAGCTCCCTGAAAGCAGAAACTGTCTGCTTC...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTCAAGTTTCACCATGTTaGCCAGGATATCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPQVSPC*PGYPQT
Trigger: AGTTTGAGGATATCCTGGGCAACATGGTGAAACTTG...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGGTGGTCTCTACCTCCTaGTTAAGCTGCCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGVVSTS*LSCHRK
Trigger: TTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCAC...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGAGCTACTGTGGAGACTaGACATCTTGCAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGSYCGD*TSCNRW
Trigger: CCACCTGTTGCAAGATGTGCAGTCTCCACAGTAGCT...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp ACATCACCTGTCTGGAAGCAGCACTCTCCAAACATGGCTGATTGCTGGTCAGCACCAAACATGGCTGATTaGTGGTCAGCAACCTATAGT +
Preference number: 4 (lower is better)
Translates to: TSPVWKQHSPNMADCWSAPNMAD*WSATYS
Trigger: ACTATAGGTTGCTGACCAGCAATCAGCCATGTTTGG...TGCTGACCAGCAATCAGCCATGTTTGGAGAGTGCTGCTTCCAGACAGGTGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTTTCACATCACCTGTCTaGAAGCAGCACTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCFTSPV*KQHSPN
Trigger: GTTTGGAGAGTGCTGCTTCCAGACAGGTGATGTGAA...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTATGTCCCAGTTCCCATaGTTAATTTCACATCACCTG +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPMSQFP*LISHHL
Trigger: CAGGTGATGTGAAATTAACCATGGGAACTGGGACAT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATGCTGAGCCCATTTTATaGCAGTACCAGTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDAEPIL*QYQCLL
Trigger: CAGGAGACACTGGTACTGCCATAAAATGGGCTCAGC...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTAGCGTTTCACTGCTTTaGCCCAGTTTTCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCSVSLL*PSFPDS
Trigger: TGAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCT...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp CCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATCAGGATTACACCCATTGGCTaGGTGCAGTGGTTCACGGCT +
Preference number: 4 (lower is better)
Translates to: PRHDMSMSAGLSIFSLIRITPIG*VQWFTA
Trigger: AGCCGTGAACCACTGCACCCAGCCAATGGGTGTAAT...CCTGATTAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492097.5
CDS-3UTR CCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATCCATGTTGGTCAGGCTaGTCTCAAGCTACTAACCTC +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDPCWSG*SQATNL
Trigger: GAGGTTAGTAGCTTGAGACCAGCCTGACCAACATGG...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTAGCCTCCCAAGTCGCTaGGACCACAGGCACATGCCA +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNISLPSR*DHRHMP
Trigger: TGGCATGTGCCTGTGGTCCCAGCGACTTGGGAGGCT...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGCGTGGCACACACCTGTaGTCTTGGCTACTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMRGTHL*SWLLGR
Trigger: CCTCCCAAGTAGCCAAGACCACAGGTGTGTGCCACG...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp CAACAGGTGGTCTCTACCTCCTGCTTAAGCTGCCACAGGAAATCAAAGGCAATGCTTCTAGTGAAAAAGTaGAGCACTCGGCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: QQVVSTSCLSCHRKSKAMLLVKK*STRQEL
Trigger: CAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAG...CATTGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCACCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTCTCATTAATCAGGTCTaGAGTCATCTGCATGACAAA +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPLINQV*SHLHDK
Trigger: TTTGTCATGCAGATGACTTCAGACCTGATTAATGAG...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACCTGTGGATCTCTGGCTaGGTGGCTAAAGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINLWISG*VAKGQS
Trigger: GGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAG...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp CAACAGGTGGTCTCTACCTCCTGCTTAAGCTGCCACAGGAAATCAAAGGCAATGCACCTATGCCTAGATTaGATAAGACCGATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QQVVSTSCLSCHRKSKAMHLCLD*IRPILS
Trigger: AGAGAGGATCGGTCTTATTCAATCTAGGCATAGGTG...CATTGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCACCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGCGCTACAAATCCCAATaGTCCAGAGTCCCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRRYKSQ*SRVPGR
Trigger: CCGCCCGGGGACTCTGGAGCATTGGGATTTGTAGCG...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTAATCTCAAAGAAGTCTaGTGGGTTGTGAAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPNLKEV*WVVKVN
Trigger: GTTCACTTTCACAACCCAGCAGACTTCTTTGAGATT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTTTGCCCAGGCTACAGTaGAGTGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFLPRLQ*SGMILA
Trigger: AGCCAAGATCATGCCACTGCACTGTAGCCTGGGCAA...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAACCTCCTGCTTAAGCTaGCACAGGAAATCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLTSCLS*HRKSKA
Trigger: TGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGT...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTGGAACAATATGTGCATaGTACTTGACCCAGAACTAT +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPGTICA*YLTQNY
Trigger: ATAGTTCTGGGTCAAGTACCATGCACATATTGTTCC...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTAGCCTCCTGACTAGCTaGGATTACAGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFSLLTS*DYRHVP
Trigger: TGGCACATGCCTGTAATCCCAGCTAGTCAGGAGGCT...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTCTCCCCCAGCTACTGTaGAGACTGCACATCTTGCAA +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFLPQLL*RLHILQ
Trigger: TTGCAAGATGTGCAGTCTCCACAGTAGCTGGGGGAG...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAGCAAGACCCAATTCATaGAGCGTTTCACTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLARPNS*SVSLLW
Trigger: CCAAAGCAGTGAAACGCTCCATGAATTGGGTCTTGC...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492097.5
CDS-3UTR TCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATCTTCTAGTGAAAAAGTaGAGCACTCGGCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDLLVKK*STRQEL
Trigger: CAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAG...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTCTCATTTCATATTCTTaGCATTTCTTCTGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPLISYS*HFFCGL
Trigger: CAAGCCACAGAAGAAATGTCAAGAATATGAAATGAG...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTACTCCTGACCTCAAATaGTCCGCCCACTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNITPDLK*SAHFSL
Trigger: CAGGCTGAAGTGGGCGGATCATTTGAGGTCAGGAGT...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATAGGAGGGGCTATTTATaGAGTTCCTTCCCTATAGCA +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDRRGYL*SSFPIA
Trigger: TGCTATAGGGAAGGAACTTCATAAATAGCCCCTCCT...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp TGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATACAGTGAGCCATCGGTaGGATCATGCCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: CFQLSIRLLAQSSTQLMDTVSHR*DHAIAL
Trigger: GAGTGCAATGGCATGATCTCACCGATGGCTCACTGT...ATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp GGACAGAAACACAAATTCTCACTAACATGTGAAACTCTGGTCCACCACAAACCTTGCCCAAGCTGGTCTTaGACTTCTGGCCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: GQKHKFSLTCETLVHHKPCPSWS*TSGLKQ
Trigger: TTGCTTGAGGCCAGAAGTTCAAGACCAGCTTGGGCA...AGGTTTGTGGTGGACCAGAGTTTCACATGTTAGTGAGAATTTGTGTTTCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR GCA 90 bp GTACAAGTACTGAAGTCTACCACATACGCCTTTGATTGGCTATTATTAAACTTCCGCTACAAATCCCAATaGTCCAGAGTCCCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: VQVLKSTTYAFDWLLLNFRYKSQ*SRVPGR
Trigger: CCGCCCGGGGACTCTGGAGCATTGGGATTTGTAGCG...GAAGTTTAATAATAGCCAATCAAAGGCGTATGTGGTAGACTTCAGTACTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR GCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGAGCGGATCACAGAACTaGCCACATCCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRSGSQN*PHPAPA
Trigger: TGCTGGGGCTGGATGTGGGCAGTTCTGTGATCCGCT...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTATTCATCTGTATTCCTaGAGCTTTGACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPIHLYS*SFDCFF
Trigger: AAAGAAGCAGTCAAAGCTGCAGGAATACAGATGAAT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTCCAAACATGGCTGATTaGTGGTCAGCAACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFPNMAD*WSATKA
Trigger: TGCCTTGGTTGCTGACCAGCAATCAGCCATGTTTGG...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTTTTTGGAACAATATGTaGATGGTACTTGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPFWNNM*MVLDPE
Trigger: TTCTGGGTCAAGTACCATGCACATATTGTTCCAAAA...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAACACCCATTGGCTGGGTaGAGTGGTTCACGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKHPLAG*SGSRLQ
Trigger: TTGCAGCCGTGAACCACTGCACCCAGCCAATGGGTG...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492097.5
CDS-3UTR GCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTTTCAAGCGGTTCTCCTaGCTCAGCCTCCTGACTAGC +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIFKRFS*LSLLTS
Trigger: GCTAGTCAGGAGGCTGAGGCAGGAGAACCGCTTGAA...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATCTTGGCCTCACAAATTaGTGGGATTACAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDLGLTN*WDYRCE
Trigger: TTCACACCTGTAATCCCAGCAATTTGTGAGGCCAAG...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTCCTTGTTTTTGTTTTTaGCAAGTTTCACCATGTTGC +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPPCFCF*QVSPCC
Trigger: GCAACATGGTGAAACTTGGCAAAAACAAAAACAAGG...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTGTGGTCTCTACCTCCTaGTTAAGCTGCCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSVVSTS*LSCHRK
Trigger: TTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCAC...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTGTGAGATCATGCCATTaGACTCCAGTCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFVRSCH*TPVWET
Trigger: TGTCTCCCAGACTGGAGTGCAATGGCATGATCTCAC...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR CCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATACTGATCCAAAATTGTaGCTTGTGTCCCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDTDPKL*LVSLTG
Trigger: TCCTGTGAGGGACACAAGCCACAATTTTGGATCAGT...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTTTGACATTTCTTCTGTaGCTTGAAAACCACTTCACT +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPLTFLL*LENHFT
Trigger: AGTGAAGTGGTTTTCAAGCCACAGAAGAAATGTCAA...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTAGAGGTGGGGCTGGGTaGATGAAAACATCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFRGGAG*MKTSED
Trigger: GTCTTCTGATGTTTTCATCCACCCAGCCCCACCTCT...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACTTAAGGCTGCAGAGGTaGGGCTGGGTGGATGAAAAC +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINLRLQR*GWVDEN
Trigger: GTTTTCATCCACCCAGCCCCACCTCTGCAGCCTTAA...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTACAATAAGACGATTCTaGGACCAAGTAGGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPTIRRF*DQVGCK
Trigger: TTTACAACCTACTTGGTCCCAGAATCGTCTTATTGT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTGGTGCCAATAGATGCTaGTGCCAAAATATTTATGGC +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCGANRC*CQNIYG
Trigger: GCCATAAATATTTTGGCACCAGCATCTATTGGCACC...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATATATCCTCAAACTCCTaGGCTCAAGTGATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDISSNS*AQVILQ
Trigger: CTGGAGAATCACTTGAGCCCAGGAGTTTGAGGATAT...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp ACATCACCTGTCTGGAAGCAGCACTCTCCAAACATGGCTGATTGCTGGTCAGCAAGAATACTGGCTCAATaGTCCCCTTCCCAAAAATAT +
Preference number: 4 (lower is better)
Translates to: TSPVWKQHSPNMADCWSARILAQ*SPSQKY
Trigger: ATATTTTTGGGAAGGGGACCATTGAGCCAGTATTCT...TGCTGACCAGCAATCAGCCATGTTTGGAGAGTGCTGCTTCCAGACAGGTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAAGTTGCTCTCTGTGTTaGAATGCCAAGACCAACAAT +
Preference number: 4 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLSCSLC*NAKTNN
Trigger: ATTGTTGGTCTTGGCATTTCAACACAGAGAGCAACT...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp CCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATCAGGCCTCCAGTAGTCTGTTaGAGGCTATTTCCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: PRHDMSMSAGLSIFSLIRPPVVC*RLFPVL
Trigger: TAACACTGGAAATAGCCTTCAACAGACTACTGGAGG...CCTGATTAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTGTTTCTGAAAGCTATTaGCTCCAATATTGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCVSESY*LQYCSY
Trigger: GTACGAGCAATATTGGAGTCAATAGCTTTCAGAAAC...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAACTGTGGATCTCTGGCTaGGTGGCTAAAGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKLWISG*VAKGQS
Trigger: GGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAG...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR TCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGATTCTACATCCAGCTTaGCACTACTCACGACTTACT +
Preference number: 4 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGILHPA*HYSRLT
Trigger: AGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAAT...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR TCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACGGTGGGAGGATCACTTaGGGCCAGGAATTAAAGACT +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINGGRIT*GQELKT
Trigger: AGTCTTTAATTCCTGGCCTCAAGTGATCCTCCCACC...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATGGTGGAAGAATCACCTaGGCCCAGGAAGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYGGRIT*AQEAEA
Trigger: AGCCTCGGCTTCCTGGGCTCAGGTGATTCTTCCACC...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp CCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATCAGGCACCTATGCCTAGATTaGATAAGACCGATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PRHDMSMSAGLSIFSLIRHLCLD*IRPILS
Trigger: AGAGAGGATCGGTCTTATTCAATCTAGGCATAGGTG...CCTGATTAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp AAAAAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAAAGCGGATCACAGAACTaGCCACATCCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KKSFTSSEKVKHSARTVKSGSQN*PHPAPA
Trigger: TGCTGGGGCTGGATGTGGGCAGTTCTGTGATCCGCT...TTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR GCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATTCCTGCAGCTTTGACTaGTTCTTTTATTACGGCAAC +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDSCSFD*FFYYGN
Trigger: GTTGCCGTAATAAAAGAAGCAGTCAAAGCTGCAGGA...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTCCTTTATCAGACAGTTaGAGACCTTCTAAAAATATC +
Preference number: 4 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPPLSDS*RPSKNI
Trigger: GATATTTTTAGAAGGTCTGCAACTGTCTGATAAAGG...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTGGGATTACAGGCATGTaGCACAACGCACAGCTAATT +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFGITGM*HNAQLI
Trigger: AATTAGCTGTGCGTTGTGGCACATGCCTGTAATCCC...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTGGGACCACAGGCACATaGCATCAGGACTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIGTTGT*HQDWLI
Trigger: AATTAGCCAGTCCTGATGGCATGTGCCTGTGGTCCC...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTCTCAAAGAAGTCTGCTaGGTTGTGAAAGTGAACAAA +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCLKEVC*VVKVNK
Trigger: TTTGTTCACTTTCACAACCCAGCAGACTTCTTTGAG...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp CCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATCAGGACTGATCCAAAATTGTaGCTTGTGTCCCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: PRHDMSMSAGLSIFSLIRTDPKL*LVSLTG
Trigger: TCCTGTGAGGGACACAAGCCACAATTTTGGATCAGT...CCTGATTAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTAACATGGCTGATTGCTaGTCAGCAACCAAGGCAACT +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFNMADC*SATKAT
Trigger: AGTTGCCTTGGTTGCTGACCAGCAATCAGCCATGTT...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATGTCCCAGTTCCCATaGTTAATTTCACATCACCTG +
Preference number: 4 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLMSQFP*LISHHL
Trigger: CAGGTGATGTGAAATTAACCATGGGAACTGGGACAT...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp CAACAGGTGGTCTCTACCTCCTGCTTAAGCTGCCACAGGAAATCAAAGGCAATGATTGCTCGTACAAGATaGTATTTACTGGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QQVVSTSCLSCHRKSKAMIARTR*YLLVEG
Trigger: GCCTTCTACCAGTAAATACCATCTTGTACGAGCAAT...CATTGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCACCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTTGTTATACCAATTCATaGAGCGTTTCACTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCCYTNS*SVSLLW
Trigger: CCAAAGCAGTGAAACGCTCCATGAATTGGTATAACA...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACGGCCCAAGGTATGTTTaGGGCTTTCTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINGPRYV*GFLSLS
Trigger: AGAGAGAGAGAGAAAGCCCCAAACATACCTTGGGCC...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTATTACGGCAACAAATTaGATCCAAAGAACATCAGGA +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCITATN*IQRTSG
Trigger: TCCTGATGTTCTTTGGATTCAATTTGTTGCCGTAAT...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATCCAAGACCAACAATTTaGTTCATCTGTATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDPRPTI*FICIPA
Trigger: TGCAGGAATACAGATGAATCAAATTGTTGGTCTTGG...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATGTTTCTGAAAGCTATTaGCTCCAATATTGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDVSESY*LQYCSY
Trigger: GTACGAGCAATATTGGAGTCAATAGCTTTCAGAAAC...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGCATATGGGTTATCCCTaGGCTTCATCTCATCTGCAC +
Preference number: 4 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMHMGYP*ASSHLH
Trigger: GTGCAGATGAGATGAAGCTCAGGGATAACCCATATG...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR TCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATTTTATCCCACATACATaGAAGCACAGTGCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDFIPHT*KHSAKF
Trigger: GAACTTAGCACTGTGCTTTCATGTATGTGGGATAAA...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTAAGCCGAGGCTGCAGTaGGGCATGATTATACCACTG +
Preference number: 4 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLKPRLQ*GMIIPL
Trigger: CAGTGGTATAATCATGCCTCACTGCAGCCTCGGCTT...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTCTCTCTGTGTTGAAATaGCAAGACCAACAATTTGAT +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCLSVLK*QDQQFD
Trigger: ATCAAATTGTTGGTCTTGGCATTTCAACACAGAGAG...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp CCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATCAGGAAGCATACGACTTCTTaGCCAATCTTCCACCCAATT +
Preference number: 4 (lower is better)
Translates to: PRHDMSMSAGLSIFSLIRKHTTS*PIFHPI
Trigger: AATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTT...CCTGATTAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTCATGGAGCGTTTCACTaGTTTGGCCCAGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIHGAFH*FGPVFQ
Trigger: CTGGAAAACTGGGCCAAAGCAGTGAAACGCTCCATG...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACCTTGGCCTCCCAAAGTaGTGGGAAGAGTATAGTTCT +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINLGLPK*WEEYSS
Trigger: AGAACTATACTCTTCCCAGCACTTTGGGAGGCCAAG...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGGTGATCATATCTCACTaGAGCCTCGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRVIISH*SLELLG
Trigger: GCCCAGGAGTTCGAGGCTGCAGTGAGATATGATCAC...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAACCATCGGTGAGATCATaGCATTGCACTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKPSVRS*HCTPVW
Trigger: CCAGACTGGAGTGCAATGGCATGATCTCACCGATGG...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGTTCACATCACCTGTCTaGAAGCAGCACTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMFTSPV*KQHSPN
Trigger: GTTTGGAGAGTGCTGCTTCCAGACAGGTGATGTGAA...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATTTCACATCACCTGTCTaGAAGCAGCACTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINFTSPV*KQHSPN
Trigger: GTTTGGAGAGTGCTGCTTCCAGACAGGTGATGTGAA...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATTGCTCGTACAAGATaGTATTTACTGGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLIARTR*YLLVEG
Trigger: GCCTTCTACCAGTAAATACCATCTTGTACGAGCAAT...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCAGCGTTTCACTGCTTTaGCCCAGTTTTCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHASVSLL*PSFPDS
Trigger: TGAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCT...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGAGCGTTTCACTGCTTTaGCCCAGTTTTCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMSVSLL*PSFPDS
Trigger: TGAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCT...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTGGATCTCTGGCTGAGTaGCTAAAGGGCAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLGSLAE*LKGNPE
Trigger: CTCAGGATTGCCCTTTAGCCACTCAGCCAGAGATCC...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR CCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTGGAACAAGGGTCCCATaGGAATATGATACAGCCAAT +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFGTRVP*EYDTAN
Trigger: ATTGGCTGTATCATATTCCCATGGGACCCTTGTTCC...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGTCCATGATAGAATACTaGCTCAATGGTCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMSMIEY*LNGPLP
Trigger: GGGAAGGGGACCATTGAGCCAGTATTCTATCATGGA...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTCTCCCCCAGCTACTGTaGAGACTGCACATCTTGCAA +
Preference number: 4 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLLPQLL*RLHILQ
Trigger: TTGCAAGATGTGCAGTCTCCACAGTAGCTGGGGGAG...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCTTCTAGTGAAAAAGTaGAGCACTCGGCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHALLVKK*STRQEL
Trigger: CAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAG...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATATACAGAACCTTTTGTaGGCTTATATAACAACCAGG +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDIQNLL*AYITTR
Trigger: CCTGGTTGTTATATAAGCTCACAAAAGGTTCTGTAT...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATACAGAACCTTTTGTaGGCTTATATAACAACCAGG +
Preference number: 4 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLIQNLL*AYITTR
Trigger: CCTGGTTGTTATATAAGCTCACAAAAGGTTCTGTAT...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATCCTCCAGTAGTCTGTTaGAGGCTATTTCCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINPPVVC*RLFPVL
Trigger: TAACACTGGAAATAGCCTTCAACAGACTACTGGAGG...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTAAAAGGTCTAACTGCTaGGCCCATTTTATGGCAGTA +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFKRSNC*AHFMAV
Trigger: TACTGCCATAAAATGGGCTCAGCAGTTAGACCTTTT...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp TTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGTCATTTATTTCTTCTGTGGCTTaGAAACCACTTCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: LLVEGFKPIKEAHAQGSFISSVA*KPLHFV
Trigger: GACAAAGTGAAGTGGTTTTCAAGCCACAGAAGAAAT...AAATGACCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp CCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATCAGGATTTCTTCTGTGGCTTaGAAACCACTTCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: PRHDMSMSAGLSIFSLIRISSVA*KPLHFV
Trigger: GACAAAGTGAAGTGGTTTTCAAGCCACAGAAGAAAT...CCTGATTAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACGAGGGGCAAATAAAGTaGAAACATGTTGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINEGQIK*KHVGRW
Trigger: CCACCTTCCAACATGTTTTCACTTTATTTGCCCCTC...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTGGTGGGAGGATCACTTaGGGCCAGGAATTAAAGACT +
Preference number: 4 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLGGRIT*GQELKT
Trigger: AGTCTTTAATTCCTGGCCTCAAGTGATCCTCCCACC...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492097.5
CDS-3UTR TCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAACTCTCCAAACATGGCTaGTTGCTGGTCAGCAACCTA +
Preference number: 4 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKLSKHG*LLVSNL
Trigger: TAGGTTGCTGACCAGCAATCAGCCATGTTTGGAGAG...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp GGACAGAAACACAAATTCTCACTAACATGTGAAACTCTGGTCCACCACAAACCTACTCGGCAAGAACTGTaGAATATCATGTTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GQKHKFSLTCETLVHHKPTRQEL*NIMLPK
Trigger: CTTGGGCAACATGATATTTCACAGTTCTTGCCGAGT...AGGTTTGTGGTGGACCAGAGTTTCACATGTTAGTGAGAATTTGTGTTTCTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR GCA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTACTCTCTGTGTTGAAATaGCAAGACCAACAATTTGAT +
Preference number: 4 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLLSVLK*QDQQFD
Trigger: ATCAAATTGTTGGTCTTGGCATTTCAACACAGAGAG...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGATTTTCTTCTTCAACTaGCTTTTGCACCTCAGTCAA +
Preference number: 4 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGIFFFN*LLHLSQ
Trigger: TTGACTGAGGTGCAAAAGGCAGTTGAAGAAGAAAAT...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATAGGTCTGAAGTCATCTaGATGACAAAACCATTCTTA +
Preference number: 4 (lower is better)
Translates to: TRSHFAAQAVTELLASSDRSEVI*MTKPFL
Trigger: TAAGAATGGTTTTGTCATGCAGATGACTTCAGACCT...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGAGGTCTGAAGTCATCTaGATGACAAAACCATTCTTA +
Preference number: 4 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGRSEVI*MTKPFL
Trigger: TAAGAATGGTTTTGTCATGCAGATGACTTCAGACCT...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTCATGGAGCGTTTCACTaGTTTGGCCCAGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLHGAFH*FGPVFQ
Trigger: CTGGAAAACTGGGCCAAAGCAGTGAAACGCTCCATG...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp TGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATGAGCTTCATCTCATCTaGACGTCACATAAACCAGCT +
Preference number: 4 (lower is better)
Translates to: CFQLSIRLLAQSSTQLMDELHLI*TSHKPA
Trigger: AGCTGGTTTATGTGACGTGCAGATGAGATGAAGCTC...ATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR GCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACGAAGGTGGGGTCAACTaGCTTAGGACAATTCTACAT +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINEGGVN*LRTILH
Trigger: ATGTAGAATTGTCCTAAGGCAGTTGACCCCACCTTC...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTTTAGGTGCCAATAGATaGTGGTGCCAAAATATTTAT +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCLGANR*WCQNIY
Trigger: ATAAATATTTTGGCACCAGCATCTATTGGCACCTAA...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACCTCCAAGATCATTCCTaGATTCCTCTAGGAACAAGG +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINLQDHS*IPLGTR
Trigger: CCTTGTTCCTAGAGGAATGCAGGAATGATCTTGGAG...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAAGGAGACTGCACATCTTaGAACAGGTGGTCTCTACCT +
Preference number: 4 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKGDCTS*NRWSLP
Trigger: AGGTAGAGACCACCTGTTGCAAGATGTGCAGTCTCC...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTAGCTACTGTGGAGACTaGACATCTTGCAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLSYCGD*TSCNRW
Trigger: CCACCTGTTGCAAGATGTGCAGTCTCCACAGTAGCT...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTGTGAGATCATGCCATTaGACTCCAGTCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLVRSCH*TPVWET
Trigger: TGTCTCCCAGACTGGAGTGCAATGGCATGATCTCAC...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp TGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATCCAAACATGGCTGATTaGTGGTCAGCAACCTATAGT +
Preference number: 4 (lower is better)
Translates to: CFQLSIRLLAQSSTQLMDPNMAD*WSATYS
Trigger: ACTATAGGTTGCTGACCAGCAATCAGCCATGTTTGG...ATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAAGCTGAGCCCATTTTATaGCAGTACCAGTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKAEPIL*QYQCLL
Trigger: CAGGAGACACTGGTACTGCCATAAAATGGGCTCAGC...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTTTTGTGGTTATATGTTaGGAAAGAAGAACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCFVVIC*ERRTWK
Trigger: TTTCCACGTTCTTCTTTCCCAACATATAACCACAAA...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTTCGAACCAGAAGACCTaGCTTTGGGTTTACAATAAG +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFSNQKT*LWVYNK
Trigger: CTTATTGTAAACCCAAAGCCAGGTCTTCTGGTTCGA...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTCTGAGGCATACAAATTaGAATCTACATTTACCATCT +
Preference number: 4 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCLRHTN*NLHLPS
Trigger: AGATGGTAAATGTAGATTCCAATTTGTATGCCTCAG...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCAACATGGCTGATTGCTaGTCAGCAACCTATAGTCCT +
Preference number: 4 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHANMADC*SATYSP
Trigger: AGGACTATAGGTTGCTGACCAGCAATCAGCCATGTT...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACGTATTCCTGCAGCTTTaGCTGCTTCTTTTATTACGG +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINVFLQL*LLLLLR
Trigger: CCGTAATAAAAGAAGCAGTCAAAGCTGCAGGAATAC...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGTATTCCTGCAGCTTTaGCTGCTTCTTTTATTACGG +
Preference number: 4 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMVFLQL*LLLLLR
Trigger: CCGTAATAAAAGAAGCAGTCAAAGCTGCAGGAATAC...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCAGTTGCTCTCTGTGTTaGAATGCCAAGACCAACAAT +
Preference number: 4 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHASCSLC*NAKTNN
Trigger: ATTGTTGGTCTTGGCATTTCAACACAGAGAGCAACT...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp GGACAGAAACACAAATTCTCACTAACATGTGAAACTCTGGTCCACCACAAACCTAGTTGCTCTCTGTGTTaGAATGCCAAGACCAACAAT +
Preference number: 4 (lower is better)
Translates to: GQKHKFSLTCETLVHHKPSCSLC*NAKTNN
Trigger: ATTGTTGGTCTTGGCATTTCAACACAGAGAGCAACT...AGGTTTGTGGTGGACCAGAGTTTCACATGTTAGTGAGAATTTGTGTTTCTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR TCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTTATCTCTTCATCCACTaGTCCAAAATTGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFYLFIH*SKIVAC
Trigger: ACAAGCCACAATTTTGGATCAGTGGATGAAGAGATA...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATAAAAGGTCTAACTGCTaGGCCCATTTTATGGCAGTA +
Preference number: 4 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINKRSNC*AHFMAV
Trigger: TACTGCCATAAAATGGGCTCAGCAGTTAGACCTTTT...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR TCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGTCTCAGCAGCATCTGTaGAAAGGTCTAACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRSQQHL*KGLTAE
Trigger: CTCAGCAGTTAGACCTTTTCACAGATGCTGCTGAGA...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTCTCATTAATCAGGTCTaGAGTCATCTGCATGACAAA +
Preference number: 4 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSLINQV*SHLHDK
Trigger: TTTGTCATGCAGATGACTTCAGACCTGATTAATGAG...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACTATGTGCATGGTACTTaGCCCAGAACTATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINYVHGT*PRTISL
Trigger: CAAGCTAATAGTTCTGGGTCAAGTACCATGCACATA...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp TTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTACTGGTAACAGTGAGCCATCGGTaGGATCATGCCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: FLKAIDSNIARTRWYLLVTVSHR*DHAIAL
Trigger: GAGTGCAATGGCATGATCTCACCGATGGCTCACTGT...TACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATAAAAACCCTAACTGCTaGGCCCATTTTATGGCAGTA +
Preference number: 4 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINKNPNC*AHFMAV
Trigger: TACTGCCATAAAATGGGCTCAGCAGTTAGGGTTTTT...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492097.5
CDS-3UTR GCA 90 bp GGACAGAAACACAAATTCTCACTAACATGTGAAACTCTGGTCCACCACAAACCTTCCTGCAGCTTTGACTaGTTCTTTTATTACGGCAAC +
Preference number: 4 (lower is better)
Translates to: GQKHKFSLTCETLVHHKPSCSFD*FFYYGN
Trigger: GTTGCCGTAATAAAAGAAGCAGTCAAAGCTGCAGGA...AGGTTTGTGGTGGACCAGAGTTTCACATGTTAGTGAGAATTTGTGTTTCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR GCA 90 bp TTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGTCATTTATTCATCTGTATTCCTaGAGCTTTGACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LLVEGFKPIKEAHAQGSFIHLYS*SFDCFF
Trigger: AAAGAAGCAGTCAAAGCTGCAGGAATACAGATGAAT...AAATGACCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTAATCTCAAAGAAGTCTaGTGGGTTGTGAAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSNLKEV*WVVKVN
Trigger: GTTCACTTTCACAACCCAGCAGACTTCTTTGAGATT...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTCAGTGTCTCCTGCATTaGTTTCAGCTAAGCATACGA +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIQCLLH*FQLSIR
Trigger: TCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTG...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp CCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTAATCAGGAGGTCTGAAGTCATCTaGATGACAAAACCATTCTTA +
Preference number: 4 (lower is better)
Translates to: PRHDMSMSAGLSIFSLIRRSEVI*MTKPFL
Trigger: TAAGAATGGTTTTGTCATGCAGATGACTTCAGACCT...CCTGATTAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp TTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTACTGGTACCATCGGTGAGATCATaGCATTGCACTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: FLKAIDSNIARTRWYLLVPSVRS*HCTPVW
Trigger: CCAGACTGGAGTGCAATGGCATGATCTCACCGATGG...TACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCATGTCCCAGTTCCCATaGTTAATTTCACATCACCTG +
Preference number: 4 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHAMSQFP*LISHHL
Trigger: CAGGTGATGTGAAATTAACCATGGGAACTGGGACAT...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTTGTTATACCAATTCATaGAGCGTTTCACTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFCYTNS*SVSLLW
Trigger: CCAAAGCAGTGAAACGCTCCATGAATTGGTATAACA...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTAAAGTGAAAACATGTTaGAAGGTGGGGTCAACTGCC +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIKVKTC*KVGSTA
Trigger: GGCAGTTGACCCCACCTTCCAACATGTTTTCACTTT...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTATTTGTGGTTATATGTTaGGAAAGAAGAACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLFVVIC*ERRTWK
Trigger: TTTCCACGTTCTTCTTTCCCAACATATAACCACAAA...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492097.5
CDS-3UTR CCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGGGCCTCCCAAAGTGCTaGGAAGAGTATAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRGLPKC*EEYSSS
Trigger: AGAAGAACTATACTCTTCCCAGCACTTTGGGAGGCC...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACATTACCCATTTTGACTaGTTCGAACCAGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINITHFD*FEPEDL
Trigger: CAGGTCTTCTGGTTCGAACCAGTCAAAATGGGTAAT...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCCATGATAGAATACTaGCTCAATGGTCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLSMIEY*LNGPLP
Trigger: GGGAAGGGGACCATTGAGCCAGTATTCTATCATGGA...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGCCTCCAGTAGTCTGTTaGAGGCTATTTCCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRPPVVC*RLFPVL
Trigger: TAACACTGGAAATAGCCTTCAACAGACTACTGGAGG...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTGAAGATATAAAGTTTTaGGGTATTGCTGCCTTACCA +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFEDIKF*GIAALP
Trigger: TGGTAAGGCAGCAATACCTCAAAACTTTATATCTTC...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACTCTCATAAGCTTATCTaGGAGGGACATATTAAGCTC +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINSHKLI*EGHIKL
Trigger: GAGCTTAATATGTCCCTCTCAGATAAGCTTATGAGA...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp TGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATTCTCATAAGCTTATCTaGGAGGGACATATTAAGCTC +
Preference number: 4 (lower is better)
Translates to: CFQLSIRLLAQSSTQLMDSHKLI*EGHIKL
Trigger: GAGCTTAATATGTCCCTCTCAGATAAGCTTATGAGA...ATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR TCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGGAGGGGCAAATAAAGTaGAAACATGTTGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGREGQIK*KHVGRW
Trigger: CCACCTTCCAACATGTTTTCACTTTATTTGCCCCTC...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACTTAGATTACCCATTTTaGCTGGTTCGAACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINLDYPF*LVRTRR
Trigger: TCTTCTGGTTCGAACCAGTCAAAATGGGTAATCTAA...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp GTACAAGTACTGAAGTCTACCACATACGCCTTTGATTGGCTATTATTAAACTTCCTGAGGTACAAGTACTaGAGTCTACCACATACGCCT +
Preference number: 4 (lower is better)
Translates to: VQVLKSTTYAFDWLLLNFLRYKY*SLPHTP
Trigger: AGGCGTATGTGGTAGACTTCAGTACTTGTACCTCAG...GAAGTTTAATAATAGCCAATCAAAGGCGTATGTGGTAGACTTCAGTACTTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR GCA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTATTTTCTTCTTCAACTaGCTTTTGCACCTCAGTCAA +
Preference number: 4 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFIFFFN*LLHLSQ
Trigger: TTGACTGAGGTGCAAAAGGCAGTTGAAGAAGAAAAT...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTAAGCATACGACTTCTTaGCCAATCTTCCACCCAATT +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIKHTTS*PIFHPI
Trigger: AATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTT...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATCATGGAGCGTTTCACTaGTTTGGCCCAGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYHGAFH*FGPVFQ
Trigger: CTGGAAAACTGGGCCAAAGCAGTGAAACGCTCCATG...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGAACTGGGGGCAATTTTaGCTCTCAGAATGGCAATGT +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRNWGQF*LSEWQC
Trigger: ACATTGCCATTCTGAGAGGCAAAATTGCCCCCAGTT...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR GCA 90 bp TTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTACTGGTAGGAGACTGCACATCTTaGAACAGGTGGTCTCTACCT +
Preference number: 4 (lower is better)
Translates to: FLKAIDSNIARTRWYLLVGDCTS*NRWSLP
Trigger: AGGTAGAGACCACCTGTTGCAAGATGTGCAGTCTCC...TACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTACTGATCCAAAATTGTaGCTTGTGTCCCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLTDPKL*LVSLTG
Trigger: TCCTGTGAGGGACACAAGCCACAATTTTGGATCAGT...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACATTGCTCGTACAAGATaGTATTTACTGGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINIARTR*YLLVEG
Trigger: GCCTTCTACCAGTAAATACCATCTTGTACGAGCAAT...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTAAAGTGAAAACATGTTaGAAGGTGGGGTCAACTGCC +
Preference number: 4 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLKVKTC*KVGSTA
Trigger: GGCAGTTGACCCCACCTTCCAACATGTTTTCACTTT...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR TCA 90 bp AAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAATATCTTCTAGTGAAAAAGTaGAGCACTCGGCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: KSFTSSEKVKHSARTVKYLLVKK*STRQEL
Trigger: CAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAG...ATATTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR TCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTCTCAGCAGCATCTGTaGAAAGGTCTAACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYSQQHL*KGLTAE
Trigger: CTCAGCAGTTAGACCTTTTCACAGATGCTGCTGAGA...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR TCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTATTTCTTCTGTGGCTTaGAAACCACTTCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIISSVA*KPLHFV
Trigger: GACAAAGTGAAGTGGTTTTCAAGCCACAGAAGAAAT...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATCTCATTTCATATTCTTaGCATTTCTTCTGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINLISYS*HFFCGL
Trigger: CAAGCCACAGAAGAAATGTCAAGAATATGAAATGAG...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGAAGATATAAAGTTTTaGGGTATTGCTGCCTTACCA +
Preference number: 4 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINEDIKF*GIAALP
Trigger: TGGTAAGGCAGCAATACCTCAAAACTTTATATCTTC...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR GCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTTCCTGCAGCTTTGACTaGTTCTTTTATTACGGCAAC +
Preference number: 4 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLSCSFD*FFYYGN
Trigger: GTTGCCGTAATAAAAGAAGCAGTCAAAGCTGCAGGA...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp GGACAGAAACACAAATTCTCACTAACATGTGAAACTCTGGTCCACCACAAACCTATTCATCTGTATTCCTaGAGCTTTGACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GQKHKFSLTCETLVHHKPIHLYS*SFDCFF
Trigger: AAAGAAGCAGTCAAAGCTGCAGGAATACAGATGAAT...AGGTTTGTGGTGGACCAGAGTTTCACATGTTAGTGAGAATTTGTGTTTCTGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR GCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACCTCTCTGTGTTGAAATaGCAAGACCAACAATTTGAT +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINLSVLK*QDQQFD
Trigger: ATCAAATTGTTGGTCTTGGCATTTCAACACAGAGAG...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp GTACAAGTACTGAAGTCTACCACATACGCCTTTGATTGGCTATTATTAAACTTCGGAATGGGGAGTGTGTaGGTATGTCTTCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: VQVLKSTTYAFDWLLLNFGMGSV*VCLLNV
Trigger: GACATTAAGAAGACATACGCACACACTCCCCATTCC...GAAGTTTAATAATAGCCAATCAAAGGCGTATGTGGTAGACTTCAGTACTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR GCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATACCTCCTGCTTAAGCTaGCACAGGAAATCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYTSCLS*HRKSKA
Trigger: TGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGT...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATCCAACACATCTTATATaGGTCAAAAAGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINPTHLI*VKKSSC
Trigger: ACAACTGGACTTTTTGACCCATATAAGATGTGTTGG...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACAACCAAGGCAACTATTaGTATAGGCACACCAAATAT +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINNQGNY*YRHTKY
Trigger: ATATTTGGTGTGCCTATACCAATAGTTGCCTTGGTT...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACTTAGTCATTGTCATATaGGTTATCCCTGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SLSYGLSLSFISSARHINLVIVI*VIPELH
Trigger: ATGAAGCTCAGGGATAACCCATATGACAATGACTAA...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGAGCATGCAGAGAAACTaGATCACTCATACATTCCTG +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRSMQRN*ITHTFL
Trigger: CAGGAATGTATGAGTGATCCAGTTTCTCTGCATGCT...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTGCCTCAATTGGCAAATaGGCAAAAGATATGAACAGA +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIASIGK*AKDMNR
Trigger: TCTGTTCATATCTTTTGCCCATTTGCCAATTGAGGC...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp AAAAAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAAGTATTCCTGCAGCTTTaGCTGCTTCTTTTATTACGG +
Preference number: 4 (lower is better)
Translates to: KKSFTSSEKVKHSARTVKVFLQL*LLLLLR
Trigger: CCGTAATAAAAGAAGCAGTCAAAGCTGCAGGAATAC...TTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR TCA 90 bp CTGAAGTCTACCACATACGCCTTTGATTGGCTATTATTAAACTTCACTGGAATGCCAAGACCAACAATTTaGTTCATCTGTATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LKSTTYAFDWLLLNFTGMPRPTI*FICIPA
Trigger: TGCAGGAATACAGATGAATCAAATTGTTGGTCTTGG...CATTCCAGTGAAGTTTAATAATAGCCAATCAAAGGCGTATGTGGTAGACTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR TCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTCCAAGACCAACAATTTaGTTCATCTGTATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLPRPTI*FICIPA
Trigger: TGCAGGAATACAGATGAATCAAATTGTTGGTCTTGG...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTACTCGGCAAGAACTGTaGAATATCTTCATAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNITRQEL*NIFIRR
Trigger: TCTTCTTATGAAGATATTTCACAGTTCTTGCCGAGT...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR TCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAATATCTCTTCATCCACTaGTCCAAAATTGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKYLFIH*SKIVAC
Trigger: ACAAGCCACAATTTTGGATCAGTGGATGAAGAGATA...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTGTTTCTGAAAGCTATTaGCTCCAATATTGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLVSESY*LQYCSY
Trigger: GTACGAGCAATATTGGAGTCAATAGCTTTCAGAAAC...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGCTCATTAATCAGGTCTaGAGTCATCTGCATGACAAA +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRLINQV*SHLHDK
Trigger: TTTGTCATGCAGATGACTTCAGACCTGATTAATGAG...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp AAAAAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAAATTCTCACTAACATGTaGAACTCTGGTCCACCACAA +
Preference number: 4 (lower is better)
Translates to: KKSFTSSEKVKHSARTVKILTNM*NSGPPQ
Trigger: TTGTGGTGGACCAGAGTTTCACATGTTAGTGAGAAT...TTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR GCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATCAGTGTCTCCTGCATTaGTTTCAGCTAAGCATACGA +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYQCLLH*FQLSIR
Trigger: TCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTG...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp TTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTACTGGTACAGTGTCTCCTGCATTaGTTTCAGCTAAGCATACGA +
Preference number: 4 (lower is better)
Translates to: FLKAIDSNIARTRWYLLVQCLLH*FQLSIR
Trigger: TCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTG...TACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATGAAGGTGGGGTCAACTaGCTTAGGACAATTCTACAT +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYEGGVN*LRTILH
Trigger: ATGTAGAATTGTCCTAAGGCAGTTGACCCCACCTTC...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR GCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGTCTGCTAGTTTAAGTTaGCCTAACACTGTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRSASLS*PNTVCG
Trigger: ACCACAAACAGTGTTAGGGCAACTTAAACTAGCAGA...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR GCA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTGCTAGTTTAAGTTaGCCTAACACTGTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLSASLS*PNTVCG
Trigger: ACCACAAACAGTGTTAGGGCAACTTAAACTAGCAGA...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTCCAACACATCTTATATaGGTCAAAAAGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIPTHLI*VKKSSC
Trigger: ACAACTGGACTTTTTGACCCATATAAGATGTGTTGG...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGGGAACAATATGTGCATaGTACTTGACCCAGAACTAT +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRGTICA*YLTQNY
Trigger: ATAGTTCTGGGTCAAGTACCATGCACATATTGTTCC...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGCAGAAGACCTGGCTTTaGGTTTACAATAAGACGATT +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRQKTWL*VYNKTI
Trigger: AATCGTCTTATTGTAAACCCAAAGCCAGGTCTTCTG...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGTCACTCATACATTCCTaGTGGGAATGTAAGATGGTA +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRSLIHS*WECKMV
Trigger: TACCATCTTACATTCCCACCAGGAATGTATGAGTGA...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAAAGAATACTGGCTCAATaGTCCCCTTCCCAAAAATAT +
Preference number: 4 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKRILAQ*SPSQKY
Trigger: ATATTTTTGGGAAGGGGACCATTGAGCCAGTATTCT...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATAACATGGCTGATTGCTaGTCAGCAACCTATAGTCCT +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYNMADC*SATYSP
Trigger: AGGACTATAGGTTGCTGACCAGCAATCAGCCATGTT...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGCTGAAGTCATCTGCATaGCAAAACCATTCTTACAAA +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRLKSSA*QNHSYK
Trigger: TTTGTAAGAATGGTTTTGTCATGCAGATGACTTCAG...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR TCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAACTGAAGTCATCTGCATaGCAAAACCATTCTTACAAA +
Preference number: 4 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKLKSSA*QNHSYK
Trigger: TTTGTAAGAATGGTTTTGTCATGCAGATGACTTCAG...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTCTGAAGTCATCTGCATaGCAAAACCATTCTTACAAA +
Preference number: 4 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLLKSSA*QNHSYK
Trigger: TTTGTAAGAATGGTTTTGTCATGCAGATGACTTCAG...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAACTCATTTCATATTCTTaGCATTTCTTCTGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKLISYS*HFFCGL
Trigger: CAAGCCACAGAAGAAATGTCAAGAATATGAAATGAG...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTCTCAGCAGCATCTGTaGAAAGGTCTGCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYSQQHL*KGLQKQ
Trigger: TTGTTTTTGCAGACCTTTTCACAGATGCTGCTGAGA...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492097.5
CDS-3UTR GCA 90 bp TTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTACTGGTATCCTGCAGCTTTGACTaGTTCTTTTATTACGGCAAC +
Preference number: 4 (lower is better)
Translates to: FLKAIDSNIARTRWYLLVSCSFD*FFYYGN
Trigger: GTTGCCGTAATAAAAGAAGCAGTCAAAGCTGCAGGA...TACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGATTTTCTTCTTCAACTaGCTTTTGCACCTCAGTCAA +
Preference number: 4 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRIFFFN*LLHLSQ
Trigger: TTGACTGAGGTGCAAAAGGCAGTTGAAGAAGAAAAT...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR GCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATAAGCATACGACTTCTTaGCCAATCTTCCACCCAATT +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYKHTTS*PIFHPI
Trigger: AATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTT...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAAAGGTCTGAAGTCATCTaGATGACAAAACCATTCTTA +
Preference number: 4 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKRSEVI*MTKPFL
Trigger: TAAGAATGGTTTTGTCATGCAGATGACTTCAGACCT...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTTTTTGGAACAATATGTaGATGGTACTTGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLFWNNM*MVLDPE
Trigger: TTCTGGGTCAAGTACCATGCACATATTGTTCCAAAA...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR CCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTTTGACATTTCTTCTGTaGCTTGAAAACCACTTCACT +
Preference number: 4 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLLTFLL*LENHFT
Trigger: AGTGAAGTGGTTTTCAAGCCACAGAAGAAATGTCAA...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTTTAGTCATTGTCATATaGGTTATCCCTGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLLVIVI*VIPELH
Trigger: ATGAAGCTCAGGGATAACCCATATGACAATGACTAA...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR CCA 90 bp GTACAAGTACTGAAGTCTACCACATACGCCTTTGATTGGCTATTATTAAACTTCATTATTAAACTTCACTaGAATGGGGAGTGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: VQVLKSTTYAFDWLLLNFIIKLH*NGECVR
Trigger: ACGCACACACTCCCCATTCCAGTGAAGTTTAATAAT...GAAGTTTAATAATAGCCAATCAAAGGCGTATGTGGTAGACTTCAGTACTTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR TCA 90 bp TTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTACTGGTACCAAGACCAACAATTTaGTTCATCTGTATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FLKAIDSNIARTRWYLLVPRPTI*FICIPA
Trigger: TGCAGGAATACAGATGAATCAAATTGTTGGTCTTGG...TACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTATCTCTTCATCCACTaGTCCAAAATTGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYYLFIH*SKIVAC
Trigger: ACAAGCCACAATTTTGGATCAGTGGATGAAGAGATA...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATCTCATTAATCAGGTCTaGAGTCATCTGCATGACAAA +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYLINQV*SHLHDK
Trigger: TTTGTCATGCAGATGACTTCAGACCTGATTAATGAG...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp AAAAAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAACTCTCTGTGTTGAAATaGCAAGACCAACAATTTGAT +
Preference number: 4 (lower is better)
Translates to: KKSFTSSEKVKHSARTVKLSVLK*QDQQFD
Trigger: ATCAAATTGTTGGTCTTGGCATTTCAACACAGAGAG...TTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR GCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATAATCTCAAAGAAGTCTaGTGGGTTGTGAAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYNLKEV*WVVKVN
Trigger: GTTCACTTTCACAACCCAGCAGACTTCTTTGAGATT...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp TTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTACTGGTAATTGCTCGTACAAGATaGTATTTACTGGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: FLKAIDSNIARTRWYLLVIARTR*YLLVEG
Trigger: GCCTTCTACCAGTAAATACCATCTTGTACGAGCAAT...TACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp TTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTACTGGTAACTCGGCAAGAACTGTaGAATATCTTCATAAGAAGA +
Preference number: 4 (lower is better)
Translates to: FLKAIDSNIARTRWYLLVTRQEL*NIFIRR
Trigger: TCTTCTTATGAAGATATTTCACAGTTCTTGCCGAGT...TACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATACTCGGCAAGAACTGTaGAATATCTTCATAAGAAGA +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYTRQEL*NIFIRR
Trigger: TCTTCTTATGAAGATATTTCACAGTTCTTGCCGAGT...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR TCA 90 bp TTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTACTGGTAATACAGAACCTTTTGTaGGCTTATATAACAACCAGG +
Preference number: 4 (lower is better)
Translates to: FLKAIDSNIARTRWYLLVIQNLL*AYITTR
Trigger: CCTGGTTGTTATATAAGCTCACAAAAGGTTCTGTAT...TACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR GCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATATTCATCTGTATTCCTaGAGCTTTGACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYIHLYS*SFDCFF
Trigger: AAAGAAGCAGTCAAAGCTGCAGGAATACAGATGAAT...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATCCAACACATCTTATATaGGTCAAAAAGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYPTHLI*VKKSSC
Trigger: ACAACTGGACTTTTTGACCCATATAAGATGTGTTGG...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CCA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTGACATTTCTTCTGTaGCTTGAAAACCACTTCACT +
Preference number: 4 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYLTFLL*LENHFT
Trigger: AGTGAAGTGGTTTTCAAGCCACAGAAGAAATGTCAA...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
3UTR CAA 72 bp CAAACAGAACATAAATATTCGCCCCATCACTGTGTTTaGTCTCAGAGTACCAAATGTAAACTAAATACCACT +
Preference number: 4 (lower is better)
Translates to: QTEHKYSPHHCV*SQSTKCKLNTT
Trigger: AGTGGTATTTAGTTTACATTTGGTACTCTGAGACAAAACACAGTGATGGGGCGAATATTTATGTTCTGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS TCA 90 bp CGAAGCCGGGGTACCGCGGCTCCTGCGCTCTCTGCTCCGGGTCCGTaGGCAGCCCCGACATCCCGATCCCGCACGCCTCTCCGCTACAGC +
Preference number: 5 (lower is better)
Translates to: RSRGTAAPALSAPGP*AAPTSRSRTPLRYS
Trigger: GCTGTAGCGGAGAGGCGTGCGGGATCGGGATGTCGGGGCTGCTCACGGACCCGGAGCAGAGAGCGCAGGAGCCGCGGTACCCCGGCTTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000392993.7
ENST00000466685.7
ENST00000472759.5
ENST00000480757.5
ENST00000487672.1
ENST00000489085.1
ENST00000492097.5
CDS GCA 90 bp AGACCCGCGCCGCCCGGTCATAGACGTGGCAGCGGATCACAGAACTaGCCACATCCAGCCCCAGCACGAAGCCGGGGTACCGCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: RPAPPGHRRGSGSQN*PHPAPARSRGTAAP
Trigger: AGGAGCCGCGGTACCCCGGCTTCGTGCTGGGGCTGGATGTGGGCAGTTCTGTGATCCGCTGCCACGTCTATGACCGGGCGGCGCGGGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000392993.7
ENST00000466685.7
ENST00000472759.5
ENST00000480757.5
ENST00000487672.1
ENST00000489085.1
ENST00000492097.5
CDS-3UTR CAA 90 bp CAACAGGTGGTCTCTACCTCCTGCTTAAGCTGCCACAGGAAATCAAAGGCAATGTGTGGTCTTGGCTACTaGGGAGGCTGGGGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: QQVVSTSCLSCHRKSKAMCGLGY*GGWGGR
Trigger: TCTTCCACCCCAGCCTCCCAAGTAGCCAAGACCACA...CATTGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCACCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTCAACTGGGGGCAATTTaGCCTCTCAGAATGGCAATG +
Preference number: 5 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPQLGAI*PLRMAM
Trigger: CATTGCCATTCTGAGAGGCAAAATTGCCCCCAGTTG...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTATCCAAAATTGTGGCTaGTGTCCCTCACAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPIQNCG*CPSQEV
Trigger: TACCTCCTGTGAGGGACACAAGCCACAATTTTGGAT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTTCCACTGATCCAAAATaGTGGCTTGTGTCCCTCACA +
Preference number: 5 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPSTDPK*WLVSLT
Trigger: TGTGAGGGACACAAGCCACAATTTTGGATCAGTGGA...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTTTCTTCAACTGCCTTTaGCACCTCAGTCAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPFFNCL*HLSQVL
Trigger: CAGAACTTGACTGAGGTGCAAAAGGCAGTTGAAGAA...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTCCAGTGTCTCCTGCATaGCTTTCAGCTAAGCATACG +
Preference number: 5 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCPVSPA*LSAKHT
Trigger: CGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGG...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGGAGCGTTTCACTGCTTaGGCCCAGTTTTCCAGACTC +
Preference number: 5 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGERFTA*AQFSRL
Trigger: GAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCTC...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATGTGAAACTGTCCTTGTaGCTCCCTGTGGATCTCTGG +
Preference number: 5 (lower is better)
Translates to: TRSHFAAQAVTELLASSDVKLSL*LPVDLW
Trigger: CCAGAGATCCACAGGGAGCAACAAGGACAGTTTCAC...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATTGCAGTGGCATGATCTaGGCTCACTGCAACTTCCAC +
Preference number: 5 (lower is better)
Translates to: TRSHFAAQAVTELLASSDCSGMI*AHCNFH
Trigger: GTGGAAGTTGCAGTGAGCCAAGATCATGCCACTGCA...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTATCCTCCTGCCTCAATaGGCAAATGGGCAAAAGATA +
Preference number: 5 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPILLPQ*ANGQKI
Trigger: TATCTTTTGCCCATTTGCCAATTGAGGCAGGAGGAT...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTAGGCAGAAGAGTCACTaGAACCCGAGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFRQKSH*NPRGGG
Trigger: ACCTCCGCCTCTCGGGTTCAAGTGACTCTTCTGCCT...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR CAA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTGCCAAGACCAACAATTaGATTCATCTGTATTCCTGC +
Preference number: 5 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPAKTNN*IHLYSC
Trigger: GCAGGAATACAGATGAATCAAATTGTTGGTCTTGGC...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTGCCTCCAGTAGTCTGTaGAAGGCTATTTCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCASSSL*KAISSV
Trigger: AACACTGGAAATAGCCTTCAACAGACTACTGGAGGC...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTACCAGTGTCTCCTGCATaGCTTTCAGCTAAGCATACG +
Preference number: 5 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLPVSPA*LSAKHT
Trigger: CGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGG...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp GCTGCACCCAGGCATGACATGTCAATGTCGGCAGGTCTGTCTATATTCTCATTACATGTGAAACTGTCCTaGTTGCTCCCTGTGGATCTC +
Preference number: 5 (lower is better)
Translates to: AAPRHDMSMSAGLSIFSLHVKLS*LLPVDL
Trigger: GAGATCCACAGGGAGCAACAAGGACAGTTTCACATG...TAATGAGAATATAGACAGACCTGCCGACATTGACATGTCATGCCTGGGTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR CAA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTTGCCCGGCCTTGTTTTaGTTTTTGCCAAGTTTCACC +
Preference number: 5 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCCPALF*FLPSFT
Trigger: GGTGAAACTTGGCAAAAACAAAAACAAGGCCGGGCA...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp ACTGTCCTTGTTGCTCCCTGTGGATCTCTGGCTGAGTGGCTAAAGGGCAATCCTTGTATTCCTGCAGCTTaGACTGCTTCTTTTATTACG +
Preference number: 5 (lower is better)
Translates to: TVLVAPCGSLAEWLKGNPCIPAA*TASFIT
Trigger: CGTAATAAAAGAAGCAGTCAAAGCTGCAGGAATACA...AGGATTGCCCTTTAGCCACTCAGCCAGAGATCCACAGGGAGCAACAAGGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACTACAGTGACACCAACTaGGCTCACTGCAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: SLSYGLSLSFISSARHINYSDTN*AHCSLH
Trigger: GTGGAGGCTGCAGTGAGCCAAGTTGGTGTCACTGTA...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATCCAAGTTTCACCATGTaGCCCAGGATATCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TRSHFAAQAVTELLASSDPSFTM*PRISSN
Trigger: GTTTGAGGATATCCTGGGCAACATGGTGAAACTTGG...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAACACACACCTGTGGTCTaGGCTACTTGGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKHTPVV*ATWEAG
Trigger: CCCAGCCTCCCAAGTAGCCAAGACCACAGGTGTGTG...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS CCA 90 bp ACATCACCTGTCTGGAAGCAGCACTCTCCAAACATGGCTGATTGCTaGTCAGCAACCTACCAAAAATGTTCAAATGTAAACCCATTGCCC +
Preference number: 5 (lower is better)
Translates to: TSPVWKQHSPNMADC*SATYQKCSNVNPLP
Trigger: GGGCAATGGGTTTACATTTGAACATTTTTGGTAGGTTGCTGACCAGCAATCAGCCATGTTTGGAGAGTGCTGCTTCCAGACAGGTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460630.1
CDS-3UTR CAA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTGCCAAGACCAACAATTaGATTCATCTGTATTCCTGC +
Preference number: 5 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCAKTNN*IHLYSC
Trigger: GCAGGAATACAGATGAATCAAATTGTTGGTCTTGGC...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp TGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATGAGCGTTTCACTGCTTaGGCCCAGTTTTCCAGACTC +
Preference number: 5 (lower is better)
Translates to: CFQLSIRLLAQSSTQLMDERFTA*AQFSRL
Trigger: GAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCTC...ATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTCATGTGAAACTGTCCTaGTTGCTCCCTGTGGATCTC +
Preference number: 5 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFHVKLS*LLPVDL
Trigger: GAGATCCACAGGGAGCAACAAGGACAGTTTCACATG...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTTGTTTGAAGACATTTTaGGCCATAACAACTAGGGGG +
Preference number: 5 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCCLKTF*AITTRG
Trigger: CCCCCTAGTTGTTATGGCCAAAAATGTCTTCAAACA...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTGTGGTCTTGGCTACTaGGGAGGCTGGGGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLCGLGY*GGWGGR
Trigger: TCTTCCACCCCAGCCTCCCAAGTAGCCAAGACCACA...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTTCCACTGATCCAAAATaGTGGCTTGTGTCCCTCACA +
Preference number: 5 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSSTDPK*WLVSLT
Trigger: TGTGAGGGACACAAGCCACAATTTTGGATCAGTGGA...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTCATTTCTTCTGTGGCTaGAAAACCACTTCACTTTGT +
Preference number: 5 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCHFFCG*KTTSLC
Trigger: ACAAAGTGAAGTGGTTTTCAAGCCACAGAAGAAATG...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp TGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGAATTCTACATCCAGCTaGACACTACTCACGACTTAC +
Preference number: 5 (lower is better)
Translates to: WYLLVEGFKPIKEAHAQGNSTSS*TLLTTY
Trigger: GTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATT...CCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR CAA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTTACCTAAAACCCTTCTaGTCTAACCATATTAAGGCC +
Preference number: 5 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCYLKPF*SNHIKA
Trigger: GGCCTTAATATGGTTAGACAAGAAGGGTTTTAGGTA...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACATCCAAAATTGTGGCTaGTGTCCCTCACAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: SLSYGLSLSFISSARHINIQNCG*CPSQEV
Trigger: TACCTCCTGTGAGGGACACAAGCCACAATTTTGGAT...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp GCATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATATCCAAAATTGTGGCTaGTGTCCCTCACAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: ALLSAKHTTSCPIFHPINIQNCG*CPSQEV
Trigger: TACCTCCTGTGAGGGACACAAGCCACAATTTTGGAT...ATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGTCCACTGATCCAAAATaGTGGCTTGTGTCCCTCACA +
Preference number: 5 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMSTDPK*WLVSLT
Trigger: TGTGAGGGACACAAGCCACAATTTTGGATCAGTGGA...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGCCTCCAGTAGTCTGTaGAAGGCTATTTCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMASSSL*KAISSV
Trigger: AACACTGGAAATAGCCTTCAACAGACTACTGGAGGC...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp CAACAGGTGGTCTCTACCTCCTGCTTAAGCTGCCACAGGAAATCAAAGGCAATGCTATTGACTCCAATATaGCTCGTACAAGATGGTATT +
Preference number: 5 (lower is better)
Translates to: QQVVSTSCLSCHRKSKAMLLTPI*LVQDGI
Trigger: AATACCATCTTGTACGAGCAATATTGGAGTCAATAG...CATTGCCTTTGATTTCCTGTGGCAGCTTAAGCAGGAGGTAGAGACCACCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGGAGCGTTTCACTGCTTaGGCCCAGTTTTCCAGACTC +
Preference number: 5 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRERFTA*AQFSRL
Trigger: GAGTCTGGAAAACTGGGCCAAAGCAGTGAAACGCTC...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp TGGCTAAAGGGCAATCCTGAGCATAGACACACTCTCCTCCCTTCTATCAGCTGTACTGTCAAAATGTGGTaGGAAATGACTAATGTCCTT +
Preference number: 5 (lower is better)
Translates to: WLKGNPEHRHTLLPSISCTVKMW*EMTNVL
Trigger: AAGGACATTAGTCATTTCCAACCACATTTTGACAGT...ACAGCTGATAGAAGGGAGGAGAGTGTGTCTATGCTCAGGATTGCCCTTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAATGGAGACTGCACATCTaGCAACAGGTGGTCTCTACC +
Preference number: 5 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKWRLHI*QQVVST
Trigger: GGTAGAGACCACCTGTTGCAAGATGTGCAGTCTCCA...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp TTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTACTGGTAAGGCAGAAGAGTCACTaGAACCCGAGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: FLKAIDSNIARTRWYLLVRQKSH*NPRGGG
Trigger: ACCTCCGCCTCTCGGGTTCAAGTGACTCTTCTGCCT...TACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp AAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAATATCAGCCTTCCAAAGTGTaGAGATTACAGGCGCGAGCC +
Preference number: 5 (lower is better)
Translates to: KSFTSSEKVKHSARTVKYQPSKV*RLQARA
Trigger: GGCTCGCGCCTGTAATCTCAACACTTTGGAAGGCTG...ATATTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR CAA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACTTCTTCAACTGCCTTTaGCACCTCAGTCAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: SLSYGLSLSFISSARHINFFNCL*HLSQVL
Trigger: CAGAACTTGACTGAGGTGCAAAAGGCAGTTGAAGAA...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp CATTGCTTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGTTCTTCAACTGCCTTTaGCACCTCAGTCAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: HCFQLSIRLLAQSSTQLMFFNCL*HLSQVL
Trigger: CAGAACTTGACTGAGGTGCAAAAGGCAGTTGAAGAA...CATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp TTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCAGGGGTCATTTCATTTCTTCTGTGGCTaGAAAACCACTTCACTTTGT +
Preference number: 5 (lower is better)
Translates to: LLVEGFKPIKEAHAQGSFHFFCG*KTTSLC
Trigger: ACAAAGTGAAGTGGTTTTCAAGCCACAGAAGAAATG...AAATGACCCCTGGGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATAGAAGATATAAAGTTTaGAGGTATTGCTGCCTTACC +
Preference number: 5 (lower is better)
Translates to: TRSHFAAQAVTELLASSDRRYKV*RYCCLT
Trigger: GGTAAGGCAGCAATACCTCAAAACTTTATATCTTCT...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTAATTCTACATCCAGCTaGACACTACTCACGACTTAC +
Preference number: 5 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFNSTSS*TLLTTY
Trigger: GTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATT...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTATGAAATTACACCCATaGGCTGGGTGCAGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNIMKLHP*AGCSGS
Trigger: TGAACCACTGCACCCAGCCAATGGGTGTAATTTCAT...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp ACAAGGTCTCACTTTGCTGCCCAAGCTGTAACTGAACTCCTGGCTTCAAGTGATATAATTACAAAATTCTaGCAAGATTCCTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: TRSHFAAQAVTELLASSDIITKF*QDSWAG
Trigger: TCCAGCCCAGGAATCTTGCAAGAATTTTGTAATTAT...ATCACTTGAAGCCAGGAGTTCAGTTACAGCTTGGGCAGCAAAGTGAGACCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp ACAAGATGGTATTTACTGGTAGAAGGCTTCAAACCCATAAAAGAGGCACATGCCCCCCATCACTGTGTTTaGTCTCAGAGTACCAAATGT +
Preference number: 5 (lower is better)
Translates to: TRWYLLVEGFKPIKEAHAPHHCV*SQSTKC
Trigger: ACATTTGGTACTCTGAGACAAAACACAGTGATGGGG...GGCATGTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATGTGAAACTGTCCTTGTaGCTCCCTGTGGATCTCTGG +
Preference number: 5 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYVKLSL*LPVDLW
Trigger: CCAGAGATCCACAGGGAGCAACAAGGACAGTTTCAC...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR CAA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTATGAAATTACACCCATaGGCTGGGTGCAGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLMKLHP*AGCSGS
Trigger: TGAACCACTGCACCCAGCCAATGGGTGTAATTTCAT...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492097.5
CDS-3UTR CAA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATCCAGTGTCTCCTGCATaGCTTTCAGCTAAGCATACG +
Preference number: 5 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYPVSPA*LSAKHT
Trigger: CGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGG...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp GACAATTCTACATCCAGCTTGACACTACTCACGACTTACTCCTCCTCACTGTTTCTATTGACTCCAATATaGCTCGTACAAGATGGTATT +
Preference number: 5 (lower is better)
Translates to: DNSTSSLTLLTTYSSSLFLLTPI*LVQDGI
Trigger: AATACCATCTTGTACGAGCAATATTGGAGTCAATAG...AAACAGTGAGGAGGAGTAAGTCGTGAGTAGTGTCAAGCTGGATGTAGAATTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp TTTATGGCAGTACCAGTGTCTCCTGCATTGCTTTCAGCTAAGCATACGACTTCTTTTTGTGGTTATATGTaGGGAAAGAAGAACGTGGAA +
Preference number: 5 (lower is better)
Translates to: FMAVPVSPALLSAKHTTSFCGYM*GKKNVE
Trigger: TTCCACGTTCTTCTTTCCCAACATATAACCACAAAA...AGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGTACTGCCATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492097.5
CDS-3UTR CAA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGGGGATTCAGAATCCTTaGGGGTACATTCAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRGIQNP*GYIQVF
Trigger: GAAGACTTGAATGTACCCCAAAGGATTCTGAATCCC...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAACCCCATCACTGTGTTTaGTCTCAGAGTACCAAATGT +
Preference number: 5 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKPHHCV*SQSTKC
Trigger: ACATTTGGTACTCTGAGACAAAACACAGTGATGGGG...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS GCA 90 bp ACCTCAGTCAAGTTCTGTAAAATCCAGACCAATCTCAAAGAAGTCTaGTGGGTTGTGAAAGTGAACAAACTGGCTGTAAAAAGTCGTTTA +
Preference number: 5 (lower is better)
Translates to: TSVKFCKIQTNLKEV*WVVKVNKLAVKSRL
Trigger: TAAACGACTTTTTACAGCCAGTTTGTTCACTTTCACAACCCAGCAGACTTCTTTGAGATTGGTCTGGATTTTACAGAACTTGACTGAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392993.7
ENST00000460544.5
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACTTCTACCCAGCCAATTaGAGGATAAAGATTTTCTAC +
Preference number: 5 (lower is better)
Translates to: SLSYGLSLSFISSARHINFYPAN*RIKIFY
Trigger: GTAGAAAATCTTTATCCTCAAATTGGCTGGGTAGAA...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392993.7
ENST00000480757.5
CDS-3UTR CAA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAAGCCAAGACCAACAATTaGATTCATCTGTATTCCTGC +
Preference number: 5 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKAKTNN*IHLYSC
Trigger: GCAGGAATACAGATGAATCAAATTGTTGGTCTTGGC...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp TTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTACTGGTAGCCTCCAGTAGTCTGTaGAAGGCTATTTCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: FLKAIDSNIARTRWYLLVASSSL*KAISSV
Trigger: AACACTGGAAATAGCCTTCAACAGACTACTGGAGGC...TACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACTTTTGTGGTTATATGTaGGGAAAGAAGAACGTGGAA +
Preference number: 5 (lower is better)
Translates to: SLSYGLSLSFISSARHINFCGYM*GKKNVE
Trigger: TTCCACGTTCTTCTTTCCCAACATATAACCACAAAA...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp TCATTGTCATATGGGTTATCCCTGAGCTTCATCTCATCTGCACGTCACATAAACTCAGAATGGCAATGTTaGAAGACATTTTTGGCCATA +
Preference number: 5 (lower is better)
Translates to: SLSYGLSLSFISSARHINSEWQC*KTFLAI
Trigger: TATGGCCAAAAATGTCTTCAAACATTGCCATTCTGA...GTTTATGTGACGTGCAGATGAGATGAAGCTCAGGGATAACCCATATGACAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp AACTGTTTGTTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATGCACCTATGCCTAGATaGAATAAGACCGATCCTCTC +
Preference number: 5 (lower is better)
Translates to: NCLFLKAIDSNIARTRWYAPMPR*NKTDPL
Trigger: GAGAGGATCGGTCTTATTCAATCTAGGCATAGGTGC...ATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAACAAACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp TTTCTGAAAGCTATTGACTCCAATATTGCTCGTACAAGATGGTATTTACTGGTAGCACCTATGCCTAGATaGAATAAGACCGATCCTCTC +
Preference number: 5 (lower is better)
Translates to: FLKAIDSNIARTRWYLLVAPMPR*NKTDPL
Trigger: GAGAGGATCGGTCTTATTCAATCTAGGCATAGGTGC...TACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCTTTCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS CCA 90 bp TCAGTCAAGTTCTGTAAAATCCAGACCAATCTCAAAGAAGTCTGCTaGGTTGTGAAAGTGAACAAACTGGCTGTAAAAAGTCGTTTACTT +
Preference number: 5 (lower is better)
Translates to: SVKFCKIQTNLKEVC*VVKVNKLAVKSRLL
Trigger: AAGTAAACGACTTTTTACAGCCAGTTTGTTCACTTTCACAACCCAGCAGACTTCTTTGAGATTGGTCTGGATTTTACAGAACTTGACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392993.7
ENST00000460544.5
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTGTATTCCTGCAGCTTaGACTGCTTCTTTTATTACG +
Preference number: 5 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLCIPAA*TASFIT
Trigger: CGTAATAAAAGAAGCAGTCAAAGCTGCAGGAATACA...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp AAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAATATGCCAAGACCAACAATTaGATTCATCTGTATTCCTGC +
Preference number: 5 (lower is better)
Translates to: KSFTSSEKVKHSARTVKYAKTNN*IHLYSC
Trigger: GCAGGAATACAGATGAATCAAATTGTTGGTCTTGGC...ATATTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS-3UTR CAA 90 bp CTTGAGGAGATGCTCAATTCCGATGAGGGACATTCAAAGTTACTTTCCAACATTCTATTGACTCCAATATaGCTCGTACAAGATGGTATT +
Preference number: 5 (lower is better)
Translates to: LEEMLNSDEGHSKLLSNILLTPI*LVQDGI
Trigger: AATACCATCTTGTACGAGCAATATTGGAGTCAATAG...AATGTTGGAAAGTAACTTTGAATGTCCCTCATCGGAATTGAGCATCTCCTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp ACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTTCTTCATTTCTTCTGTGGCTaGAAAACCACTTCACTTTGT +
Preference number: 5 (lower is better)
Translates to: TNSSICPDFSYRNMNLFLHFFCG*KTTSLC
Trigger: ACAAAGTGAAGTGGTTTTCAAGCCACAGAAGAAATG...AAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp ATAAAGTCATTATTGCTGCAAATCCAAATGGAACCTAACCCAAATGTAGGGAGGTTTAGATTACCCATTTaGACTGGTTCGAACCAGAAG +
Preference number: 5 (lower is better)
Translates to: IKSLLLQIQMEPNPNVGRFRLPI*TGSNQK
Trigger: CTTCTGGTTCGAACCAGTCAAAATGGGTAATCTAAA...CCTCCCTACATTTGGGTTAGGTTCCATTTGGATTTGCAGCAATAATGACTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS-3UTR CAA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAATTCTACCCAGCCAATTaGAGGATAAAGATTTTCTAC +
Preference number: 5 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKFYPAN*RIKIFY
Trigger: GTAGAAAATCTTTATCCTCAAATTGGCTGGGTAGAA...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp TCTTACAAACTCCTCCATCTGCCCGGATTTTTCTTACAGGAATATGAATCTCTTCTATTGACTCCAATATaGCTCGTACAAGATGGTATT +
Preference number: 5 (lower is better)
Translates to: SYKLLHLPGFFLQEYESLLLTPI*LVQDGI
Trigger: AATACCATCTTGTACGAGCAATATTGGAGTCAATAG...AAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGGAGGAGTTTGTAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000463349.1
ENST00000480757.5
ENST00000492097.5
CDS-3UTR CAA 90 bp TTTCAGCTAAGCATACGACTTCTTGCCCAATCTTCCACCCAATTAATGGATAAAAGAAGATATAAAGTTTaGAGGTATTGCTGCCTTACC +
Preference number: 5 (lower is better)
Translates to: FQLSIRLLAQSSTQLMDKRRYKV*RYCCLT
Trigger: GGTAAGGCAGCAATACCTCAAAACTTTATATCTTCT...TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480757.5
CDS-3UTR CAA 90 bp AAGTCGTTTACTTCTAGTGAAAAAGTGAAGCACTCGGCAAGAACTGTGAAATATTTCTACCCAGCCAATTaGAGGATAAAGATTTTCTAC +
Preference number: 5 (lower is better)
Translates to: KSFTSSEKVKHSARTVKYFYPAN*RIKIFY
Trigger: GTAGAAAATCTTTATCCTCAAATTGGCTGGGTAGAA...ATATTTCACAGTTCTTGCCGAGTGCTTCACTTTTTCACTAGAAGTAAACGACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487672.1
CDS TCA 72 bp GGTACCGCGGCTCCTGCGCTCTCTGCTCCGGGTCCGTaGGCAGCCCCGACATCCCGATCCCGCACGCCTCTC +
Preference number: 6 (lower is better)
Translates to: GTAAPALSAPGP*AAPTSRSRTPL
Trigger: GAGAGGCGTGCGGGATCGGGATGTCGGGGCTGCTCACGGACCCGGAGCAGAGAGCGCAGGAGCCGCGGTACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392993.7
ENST00000466685.7
ENST00000472759.5
ENST00000480757.5
ENST00000487672.1
ENST00000489085.1
ENST00000492097.5
CDS GCA 72 bp CAGCCGCCTACCCAGAGGGCGCGCTACAAATCCCAATaGTCCAGAGTCCCCGGGCGGCCCAACCCGGGCCCC +
Preference number: 6 (lower is better)
Translates to: QPPTQRARYKSQ*SRVPGRPNPGP
Trigger: GGGGCCCGGGTTGGGCCGCCCGGGGACTCTGGAGCATTGGGATTTGTAGCGCGCCCTCTGGGTAGGCGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392993.7
ENST00000472759.5
ENST00000487672.1
ENST00000489085.1
ENST00000492097.5
CDS GCA 72 bp AGCACGAAGCCGGGGTACCGCGGCTCCTGCGCTCTCTaGTCCGGGTCCGTGAGCAGCCCCGACATCCCGATC +
Preference number: 6 (lower is better)
Translates to: STKPGYRGSCAL*SGSVSSPDIPI
Trigger: GATCGGGATGTCGGGGCTGCTCACGGACCCGGAGCAGAGAGCGCAGGAGCCGCGGTACCCCGGCTTCGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000392993.7
ENST00000466685.7
ENST00000472759.5
ENST00000480757.5
ENST00000487672.1
ENST00000489085.1
ENST00000492097.5
CDS GCA 72 bp CCGCCCGGTCATAGACGTGGCAGCGGATCACAGAACTaGCCACATCCAGCCCCAGCACGAAGCCGGGGTACC +
Preference number: 6 (lower is better)
Translates to: PPGHRRGSGSQN*PHPAPARSRGT
Trigger: GGTACCCCGGCTTCGTGCTGGGGCTGGATGTGGGCAGTTCTGTGATCCGCTGCCACGTCTATGACCGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000392993.7
ENST00000460544.5
ENST00000466685.7
ENST00000472759.5
ENST00000480757.5
ENST00000487672.1
ENST00000489085.1
ENST00000492097.5
CDS CCA 72 bp TCACATCACCTGTCTGGAAGCAGCACTCTCCAAACATaGCTGATTGCTGGTCAGCAACCAAGGCAACTATTG +
Preference number: 6 (lower is better)
Translates to: SHHLSGSSTLQT*LIAGQQPRQLL
Trigger: CAATAGTTGCCTTGGTTGCTGACCAGCAATCAGCCATGTTTGGAGAGTGCTGCTTCCAGACAGGTGATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS TCA 72 bp ATCACCTGTCTGGAAGCAGCACTCTCCAAACATGGCTaGTTGCTGGTCAGCAACCAAGGCAACTATTGGTAT +
Preference number: 6 (lower is better)
Translates to: ITCLEAALSKHG*LLVSNQGNYWY
Trigger: ATACCAATAGTTGCCTTGGTTGCTGACCAGCAATCAGCCATGTTTGGAGAGTGCTGCTTCCAGACAGGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392993.7
CDS TCA 72 bp ATCACCTGTCTGGAAGCAGCACTCTCCAAACATGGCTaGTTGCTGGTCAGCAACCTACCAAAAATGTTCAAA +
Preference number: 6 (lower is better)
Translates to: ITCLEAALSKHG*LLVSNLPKMFK
Trigger: TTTGAACATTTTTGGTAGGTTGCTGACCAGCAATCAGCCATGTTTGGAGAGTGCTGCTTCCAGACAGGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460630.1
CDS TCA 72 bp TATTGGTATAGGCACACCAAATATCTCTTCATCCACTaGTCCAAAATTGTGGCTTGTGTCCCTCACAGGAGG +
Preference number: 6 (lower is better)
Translates to: YWYRHTKYLFIH*SKIVACVPHRR
Trigger: CCTCCTGTGAGGGACACAAGCCACAATTTTGGATCAGTGGATGAAGAGATATTTGGTGTGCCTATACCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392993.7
ENST00000480757.5
ENST00000492097.5
CDS CAA 72 bp CCAAAGAACATCAGGATCAATTTCTACCCAGCCAATTaGAGGATAAAGATTTTCTACCTTCTGCACGCTGGA +
Preference number: 6 (lower is better)
Translates to: PKNIRINFYPAN*RIKIFYLLHAG
Trigger: TCCAGCGTGCAGAAGGTAGAAAATCTTTATCCTCAAATTGGCTGGGTAGAAATTGATCCTGATGTTCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000392993.7
ENST00000460544.5
ENST00000466685.7
ENST00000472759.5
ENST00000480757.5
ENST00000487672.1
ENST00000489085.1
ENST00000492097.5
CDS CAA 90 bp CTGTATTCCTGCAGCTTTGACTGCTTCTTTTATTACGGCAACAAATaGAATCCAAAGAACATCAGGATCAATTTCTACCCAGCCAATTTG +
Preference number: 6 (lower is better)
Translates to: LYSCSFDCFFYYGNK*NPKNIRINFYPANL
Trigger: CAAATTGGCTGGGTAGAAATTGATCCTGATGTTCTTTGGATTCAATTTGTTGCCGTAATAAAAGAAGCAGTCAAAGCTGCAGGAATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000392993.7
ENST00000460544.5
ENST00000466685.7
ENST00000472759.5
ENST00000480757.5
ENST00000487672.1
ENST00000489085.1
ENST00000492097.5
CDS CAA 90 bp GATTGCTGGTCAGCAACCTACCAAAAATGTTCAAATGTAAACCCATaGCCCTTAACAGTGGCCAATTTTATTATAGAGCATTGTCTCACT +
Preference number: 6 (lower is better)
Translates to: DCWSATYQKCSNVNP*PLTVANFIIEHCLT
Trigger: AGTGAGACAATGCTCTATAATAAAATTGGCCACTGTTAAGGGCAATGGGTTTACATTTGAACATTTTTGGTAGGTTGCTGACCAGCAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460630.1
CDS GCA 72 bp AAGTTCTGTAAAATCCAGACCAATCTCAAAGAAGTCTaGTGGGTTGTGAAAGTGAACAAACTGGCTGTAAAA +
Preference number: 6 (lower is better)
Translates to: KFCKIQTNLKEV*WVVKVNKLAVK
Trigger: TTTTACAGCCAGTTTGTTCACTTTCACAACCCAGCAGACTTCTTTGAGATTGGTCTGGATTTTACAGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392993.7
ENST00000460544.5
ENST00000480757.5
ENST00000492097.5
CDS CCA 72 bp GTTATAAAGTACTTCCATGATAGAATACTGGCTCAATaGTCCCCTTCCCAAAAATATAGCAGATATTCTGGT +
Preference number: 6 (lower is better)
Translates to: VIKYFHDRILAQ*SPSQKYSRYSG
Trigger: ACCAGAATATCTGCTATATTTTTGGGAAGGGGACCATTGAGCCAGTATTCTATCATGGAAGTACTTTATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480757.5
ENST00000492097.5
CDS CAA 72 bp TGCAGCTTTGACTGCTTCTTTTATTACGGCAACAAATaGAATCCAAAGAACATCAGGATCAATTTCTACCCA +
Preference number: 6 (lower is better)
Translates to: CSFDCFFYYGNK*NPKNIRINFYP
Trigger: TGGGTAGAAATTGATCCTGATGTTCTTTGGATTCAATTTGTTGCCGTAATAAAAGAAGCAGTCAAAGCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000392993.7
ENST00000460544.5
ENST00000466685.7
ENST00000472759.5
ENST00000480757.5
ENST00000487672.1
ENST00000489085.1
ENST00000492097.5
CDS CAA 72 bp TCAGCAACCTACCAAAAATGTTCAAATGTAAACCCATaGCCCTTAACAGTGGCCAATTTTATTATAGAGCAT +
Preference number: 6 (lower is better)
Translates to: SATYQKCSNVNP*PLTVANFIIEH
Trigger: ATGCTCTATAATAAAATTGGCCACTGTTAAGGGCAATGGGTTTACATTTGAACATTTTTGGTAGGTTGCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460630.1