Pregenerated sensors for GK (Homo sapiens)
Ensembl gene IDs: ENSG00000198814Ensembl transcript IDs: ENST00000378938.1, ENST00000427190.6, ENST00000479048.6, ENST00000481024.5, ENST00000488296.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCACAAGTGGAGGGAGGAGCTCCAAGTGGGGCAGAAGGCTATTaGTGCCCTTGTGATGAAGGAAAGTTGGCAGGAGATCCAGATATT | + |
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Preference number: 1 (lower is better) Translates to: AAQVEGGAPSGAEGY*CPCDEGKLAGDPDI Trigger: AATATCTGGATCTCCTGCCAACTTTCCTTCATCACAAGGGCAGCAATAGCCTTCTGCCCCACTTGGAGCTCCTCCCTCCACTTGTGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481024.5 |
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| 3UTR GCA 90 bp | GCACAAGTGGAGGGAGGAGCTCCAAGTGGGGCAGAAGGCTATTGCTaGCCTTGTGATGAAGGAAAGTTGGCAGGAGATCCAGATATTAAG | + |
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Preference number: 1 (lower is better) Translates to: AQVEGGAPSGAEGYC*PCDEGKLAGDPDIK Trigger: CTTAATATCTGGATCTCCTGCCAACTTTCCTTCATCACAAGGGCAGCAATAGCCTTCTGCCCCACTTGGAGCTCCTCCCTCCACTTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481024.5 |
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| 3UTR CCA 90 bp | GGAGAACAAAGGATTGAGGTGTTGCCTATCAGGTTGAGAGAAAAATaGTGGTCAAAGTTAGCCATGCAAGGCCCTGTTGATAATGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: GEQRIEVLPIRLREK*WSKLAMQGPVDNGC Trigger: GCAGCCATTATCAACAGGGCCTTGCATGGCTAACTTTGACCACCATTTTTCTCTCAACCTGATAGGCAACACCTCAATCCTTTGTTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR TCA 90 bp | TTCATTTGTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATaGTACCAGATACCCAAAAGATATCCCAAAGAATTGGGCTTTGGG | + |
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Preference number: 1 (lower is better) Translates to: FICWFLQKLSFFTPT*YQIPKRYPKELGFG Trigger: CCCAAAGCCCAATTCTTTGGGATATCTTTTGGGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAACAAATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR TCA 90 bp | AGAGATGCATTACTTATTTTACTGATTAGTTGGAGAACAAAGGATTaGGGTGTTGCCTATCAGGTTGAGAGAAAAATGGTGGTCAAAGTT | + |
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Preference number: 1 (lower is better) Translates to: RDALLILLISWRTKD*GVAYQVERKMVVKV Trigger: AACTTTGACCACCATTTTTCTCTCAACCTGATAGGCAACACCTCAATCCTTTGTTCTCCAACTAATCAGTAAAATAAGTAATGCATCTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGCCCCAGCTTTCACGCTATGAGAGATTTTCATTAGGCCATAGATCTCAGGGGAGGAGCTCCAAGTaGGGCAGAAGGCTATTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PRPQLSRYERFSLGHRSQGRSSK*GRRLLL Trigger: CAGCAATAGCCTTCTGCCCCACTTGGAGCTCCTCCC...CTGAGATCTATGGCCTAATGAAAATCTCTCATAGCGTGAAAGCTGGGGCCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481024.5 |
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| 3UTR CAA 90 bp | CCAAGTGGGGCAGAAGGCTATTGCTGCCCTTGTGATGAAGGAAAGTaGGCAGGAGATCCAGATATTAAGCACAGCAACAGGAAGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PSGAEGYCCPCDEGK*AGDPDIKHSNRKVR Trigger: CCTCACCTTCCTGTTGCTGTGCTTAATATCTGGATCTCCTGCCAACTTTCCTTCATCACAAGGGCAGCAATAGCCTTCTGCCCCACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481024.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAAAATGGTGGTCAAAGTTAGCCATGCAAGGCCCTGTTGATAATGGCTGCCTAGTCCCGAACTCCTaGCCTCAGGTGATCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: REKWWSKLAMQGPVDNGCLVPNS*PQVICP Trigger: TGGGCAGATCACCTGAGGTCAGGAGTTCGGGACTAG...GCAGCCATTATCAACAGGGCCTTGCATGGCTAACTTTGACCACCATTTTTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAAAATGGTGGTCAAAGTTAGCCATGCAAGGCCCTGTTGATAATGGCTGCACCGTGCCCGGCCTCTaGAACATCTTTCTTAATTTA | + |
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Preference number: 2 (lower is better) Translates to: REKWWSKLAMQGPVDNGCTVPGL*NIFLNL Trigger: TAAATTAAGAAAGATGTTTCAGAGGCCGGGCACGGT...GCAGCCATTATCAACAGGGCCTTGCATGGCTAACTTTGACCACCATTTTTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGCCTATCAGGTTGAGAGAAAAATGGTGGTCAAAGTTAGCCATGCAAGGCTTGCAAATGCTGAGATaGGACAGTGTAGTTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: VLPIRLREKWWSKLAMQGLQMLR*DSVVSS Trigger: AGAAGAAACTACACTGTCCCATCTCAGCATTTGCAA...GCCTTGCATGGCTAACTTTGACCACCATTTTTCTCTCAACCTGATAGGCAACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR TCA 90 bp | ACCAGATACCCAAAAGATATCCCAAAGAATTGGGCTTTGGGCACTTCAAAAGAATGGAGAACAAAGGATTaGGGTGTTGCCTATCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: TRYPKDIPKNWALGTSKEWRTKD*GVAYQV Trigger: AACCTGATAGGCAACACCTCAATCCTTTGTTCTCCA...TTCTTTTGAAGTGCCCAAAGCCCAATTCTTTGGGATATCTTTTGGGTATCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAAAATGGTGGTCAAAGTTAGCCATGCAAGGCCCTGTTGATAATGGCTGCCAGAAATTACTTCTTTaGCTGTTGGTTAACTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: REKWWSKLAMQGPVDNGCQKLLL*LLVNSS Trigger: TGAAGAGTTAACCAACAGCCAAAGAAGTAATTTCTG...GCAGCCATTATCAACAGGGCCTTGCATGGCTAACTTTGACCACCATTTTTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR TCA 90 bp | TTGTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCTGTTGCCTATCAGGTTaGGAGAAAAATGGTGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: LLVSPKTFFLHSHMIPDTCCLSG*EKNGGQ Trigger: TTGACCACCATTTTTCTCTCAACCTGATAGGCAACA...GGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR CCA 90 bp | ACCAGATACCCAAAAGATATCCCAAAGAATTGGGCTTTGGGCACTTCAAAAGAATACTTCTTTGGCTGTTaGTTAACTCTTCAGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TRYPKDIPKNWALGTSKEYFFGC*LTLQSV Trigger: CACACTCTGAAGAGTTAACCAACAGCCAAAGAAGTA...TTCTTTTGAAGTGCCCAAAGCCCAATTCTTTGGGATATCTTTTGGGTATCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR CCA 90 bp | GTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCCAAGGTTGAGAGAAAAATaGTGGTCAAAGTTAGCCATG | + |
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Preference number: 2 (lower is better) Translates to: VGFSKNFLSSLPHDTRYPRLREK*WSKLAM Trigger: CATGGCTAACTTTGACCACCATTTTTCTCTCAACCT...TGGGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR TCA 90 bp | ACCAGATACCCAAAAGATATCCCAAAGAATTGGGCTTTGGGCACTTCAAAAGAAGTTGATAATGGCTGCTaGCCTTACCAACATTATTTT | + |
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Preference number: 2 (lower is better) Translates to: TRYPKDIPKNWALGTSKEVDNGC*PYQHYF Trigger: AAAATAATGTTGGTAAGGTCAGCAGCCATTATCAAC...TTCTTTTGAAGTGCCCAAAGCCCAATTCTTTGGGATATCTTTTGGGTATCTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR GCA 72 bp | GAGGGAGGAGCTCCAAGTGGGGCAGAAGGCTATTGCTaGCCTTGTGATGAAGGAAAGTTGGCAGGAGATCCA | + |
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Preference number: 3 (lower is better) Translates to: EGGAPSGAEGYC*PCDEGKLAGDP Trigger: TGGATCTCCTGCCAACTTTCCTTCATCACAAGGGCAGCAATAGCCTTCTGCCCCACTTGGAGCTCCTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481024.5 |
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| 3UTR CCA 72 bp | CAGAAGGCTATTGCTGCCCTTGTGATGAAGGAAAGTTaGCAGGAGATCCAGATATTAAGCACAGCAACAGGA | + |
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Preference number: 3 (lower is better) Translates to: QKAIAALVMKES*QEIQILSTATG Trigger: TCCTGTTGCTGTGCTTAATATCTGGATCTCCTGCCAACTTTCCTTCATCACAAGGGCAGCAATAGCCTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481024.5 |
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| 3UTR CCA 72 bp | AGGATTGAGGTGTTGCCTATCAGGTTGAGAGAAAAATaGTGGTCAAAGTTAGCCATGCAAGGCCCTGTTGAT | + |
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Preference number: 3 (lower is better) Translates to: RIEVLPIRLREK*WSKLAMQGPVD Trigger: ATCAACAGGGCCTTGCATGGCTAACTTTGACCACCATTTTTCTCTCAACCTGATAGGCAACACCTCAATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR CAA 90 bp | TTGTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCCCATGCAAGGCCCTGTaGATAATGGCTGCTGACCTT | + |
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Preference number: 3 (lower is better) Translates to: LLVSPKTFFLHSHMIPDTPCKAL*IMAADL Trigger: AAGGTCAGCAGCCATTATCAACAGGGCCTTGCATGG...GGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAAAATGGTGGTCAAAGTTAGCCATGCAAGGCCCTGTTGATAATGGCTGCTTACTTCTTTGGCTGTaGGTTAACTCTTCAGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: REKWWSKLAMQGPVDNGCLLLWL*VNSSEC Trigger: ACACTCTGAAGAGTTAACCAACAGCCAAAGAAGTAA...GCAGCCATTATCAACAGGGCCTTGCATGGCTAACTTTGACCACCATTTTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAAAATGGTGGTCAAAGTTAGCCATGCAAGGCCCTGTTGATAATGGCTGCTACCAACATTATTTTTaGCAAATGCTGAGATGGGAC | + |
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Preference number: 3 (lower is better) Translates to: REKWWSKLAMQGPVDNGCYQHYF*QMLRWD Trigger: GTCCCATCTCAGCATTTGCAAAAAATAATGTTGGTA...GCAGCCATTATCAACAGGGCCTTGCATGGCTAACTTTGACCACCATTTTTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR CAA 90 bp | ACCAGATACCCAAAAGATATCCCAAAGAATTGGGCTTTGGGCACTTCAAAAGAACAAAGGATTGAGGTGTaGCCTATCAGGTTGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: TRYPKDIPKNWALGTSKEQRIEV*PIRLRE Trigger: TTCTCTCAACCTGATAGGCAACACCTCAATCCTTTG...TTCTTTTGAAGTGCCCAAAGCCCAATTCTTTGGGATATCTTTTGGGTATCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR-3UTR CAA 90 bp | TTGTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCTTGGAGAACAAAGGATaGAGGTGTTGCCTATCAGGT | + |
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Preference number: 3 (lower is better) Translates to: LLVSPKTFFLHSHMIPDTLENKG*RCCLSG Trigger: ACCTGATAGGCAACACCTCAATCCTTTGTTCTCCAA...GGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR TCA 72 bp | TGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATaGTACCAGATACCCAAAAGATATCCCAAAGAATTG | + |
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Preference number: 3 (lower is better) Translates to: WFLQKLSFFTPT*YQIPKRYPKEL Trigger: CAATTCTTTGGGATATCTTTTGGGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR TCA 72 bp | TTACTTATTTTACTGATTAGTTGGAGAACAAAGGATTaGGGTGTTGCCTATCAGGTTGAGAGAAAAATGGTG | + |
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Preference number: 3 (lower is better) Translates to: LLILLISWRTKD*GVAYQVERKMV Trigger: CACCATTTTTCTCTCAACCTGATAGGCAACACCTCAATCCTTTGTTCTCCAACTAATCAGTAAAATAAGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR TCA 72 bp | ATCATTACAGAAGCAGAGATGCATTACTTATTTTACTaGTTAGTTGGAGAACAAAGGATTGAGGTGTTGCCT | + |
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Preference number: 3 (lower is better) Translates to: IITEAEMHYLFY*LVGEQRIEVLP Trigger: AGGCAACACCTCAATCCTTTGTTCTCCAACTAATCAGTAAAATAAGTAATGCATCTCTGCTTCTGTAATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR GCA 72 bp | TATTCAGTAAAGCCCAATATGCTTGGCAGCCGAATCTaGAATGATAACATTTACTATTTTACTTGGTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: YSVKPNMLGSRI*NDNIYYFTWFL Trigger: AAGGAACCAAGTAAAATAGTAAATGTTATCATTGCAGATTCGGCTGCCAAGCATATTGGGCTTTACTGAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378938.1 |
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| CDS-3UTR CCA 90 bp | GCCCTTGTGATGAAGGAAAGTTGGCAGGAGATCCAGATATTAAGCACAGCAACAGGGAGGAGCTCCAAGTaGGGCAGAAGGCTATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ALVMKESWQEIQILSTATGRSSK*GRRLLL Trigger: CAGCAATAGCCTTCTGCCCCACTTGGAGCTCCTCCC...TGTTGCTGTGCTTAATATCTGGATCTCCTGCCAACTTTCCTTCATCACAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481024.5 |
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| CDS-3UTR TCA 90 bp | GTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCCACTAGTCCCGAACTCCTaGCCTCAGGTGATCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VGFSKNFLSSLPHDTRYPLVPNS*PQVICP Trigger: TGGGCAGATCACCTGAGGTCAGGAGTTCGGGACTAG...TGGGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR TCA 90 bp | TATTGCTGCCCTTGTGATGAAGGAAAGTTGGCAGGAGATCCAGATATTAAGCACACAGCAACAGGAAGGTaGGGATTTAAGGCCGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: YCCPCDEGKLAGDPDIKHTATGR*GFKAAD Trigger: GTCTGCGGCCTTAAATCCTCACCTTCCTGTTGCTGT...GTGCTTAATATCTGGATCTCCTGCCAACTTTCCTTCATCACAAGGGCAGCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481024.5 |
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| CDS-3UTR GCA 90 bp | CCAAGGCCCCAGCTTTCACGCTATGAGAGATTTTCATTAGGCCATAGATCTCAGGCAGAAGGCTATTGCTaGCCTTGTGATGAAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: PRPQLSRYERFSLGHRSQAEGYC*PCDEGK Trigger: CTTTCCTTCATCACAAGGGCAGCAATAGCCTTCTGC...CTGAGATCTATGGCCTAATGAAAATCTCTCATAGCGTGAAAGCTGGGGCCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481024.5 |
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| CDS-3UTR GCA 90 bp | TATTGCTGCCCTTGTGATGAAGGAAAGTTGGCAGGAGATCCAGATATTAAGCACGGGGCAGAAGGCTATTaGTGCCCTTGTGATGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: YCCPCDEGKLAGDPDIKHGAEGY*CPCDEG Trigger: TCCTTCATCACAAGGGCAGCAATAGCCTTCTGCCCC...GTGCTTAATATCTGGATCTCCTGCCAACTTTCCTTCATCACAAGGGCAGCAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481024.5 |
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| CDS-3UTR TCA 90 bp | CCAAGGCCCCAGCTTTCACGCTATGAGAGATTTTCATTAGGCCATAGATCTCAGCCAGCTTTCACGCTATaGGAGATTTTCATTAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PRPQLSRYERFSLGHRSQPAFTL*EIFIRP Trigger: TGGCCTAATGAAAATCTCTCATAGCGTGAAAGCTGG...CTGAGATCTATGGCCTAATGAAAATCTCTCATAGCGTGAAAGCTGGGGCCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000479048.6 ENST00000481024.5 |
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| CDS-3UTR TCA 90 bp | GCCCTTGTGATGAAGGAAAGTTGGCAGGAGATCCAGATATTAAGCACAGCAACACCAGCTTTCACGCTATaGGAGATTTTCATTAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: ALVMKESWQEIQILSTATPAFTL*EIFIRP Trigger: TGGCCTAATGAAAATCTCTCATAGCGTGAAAGCTGG...TGTTGCTGTGCTTAATATCTGGATCTCCTGCCAACTTTCCTTCATCACAAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481024.5 |
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| CDS-3UTR TCA 90 bp | AGAGAAAAATGGTGGTCAAAGTTAGCCATGCAAGGCCCTGTTGATAATGGCTGCTGTTGCCTATCAGGTTaGGAGAAAAATGGTGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: REKWWSKLAMQGPVDNGCCCLSG*EKNGGQ Trigger: TTGACCACCATTTTTCTCTCAACCTGATAGGCAACA...GCAGCCATTATCAACAGGGCCTTGCATGGCTAACTTTGACCACCATTTTTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR CAA 72 bp | GTTGGAGAACAAAGGATTGAGGTGTTGCCTATCAGGTaGAGAGAAAAATGGTGGTCAAAGTTAGCCATGCAA | + |
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Preference number: 4 (lower is better) Translates to: VGEQRIEVLPIR*REKWWSKLAMQ Trigger: TTGCATGGCTAACTTTGACCACCATTTTTCTCTCAACCTGATAGGCAACACCTCAATCCTTTGTTCTCCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR TCA 90 bp | ACCAGATACCCAAAAGATATCCCAAAGAATTGGGCTTTGGGCACTTCAAAAGAAACCGTGCCCGGCCTCTaGAACATCTTTCTTAATTTA | + |
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Preference number: 4 (lower is better) Translates to: TRYPKDIPKNWALGTSKETVPGL*NIFLNL Trigger: TAAATTAAGAAAGATGTTTCAGAGGCCGGGCACGGT...TTCTTTTGAAGTGCCCAAAGCCCAATTCTTTGGGATATCTTTTGGGTATCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR CCA 90 bp | AGAGAAAAATGGTGGTCAAAGTTAGCCATGCAAGGCCCTGTTGATAATGGCTGCCAAAGAATTGGGCTTTaGGCACTTCAAAAGAAACAT | + |
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Preference number: 4 (lower is better) Translates to: REKWWSKLAMQGPVDNGCQRIGL*ALQKKH Trigger: ATGTTTCTTTTGAAGTGCCCAAAGCCCAATTCTTTG...GCAGCCATTATCAACAGGGCCTTGCATGGCTAACTTTGACCACCATTTTTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR CCA 90 bp | TATTGCTGCCCTTGTGATGAAGGAAAGTTGGCAGGAGATCCAGATATTAAGCACGTGATGAAGGAAAGTTaGCAGGAGATCCAGATATTA | + |
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Preference number: 4 (lower is better) Translates to: YCCPCDEGKLAGDPDIKHVMKES*QEIQIL Trigger: TAATATCTGGATCTCCTGCCAACTTTCCTTCATCAC...GTGCTTAATATCTGGATCTCCTGCCAACTTTCCTTCATCACAAGGGCAGCAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481024.5 |
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| CDS-3UTR TCA 90 bp | TTGTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCCCAGCTTTCACGCTATaGGAGATTTTCATTAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LLVSPKTFFLHSHMIPDTPAFTL*EIFIRP Trigger: TGGCCTAATGAAAATCTCTCATAGCGTGAAAGCTGG...GGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR TCA 90 bp | TTGTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCTGGAGAACAAAGGATTaGGGTGTTGCCTATCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LLVSPKTFFLHSHMIPDTWRTKD*GVAYQV Trigger: AACCTGATAGGCAACACCTCAATCCTTTGTTCTCCA...GGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR CCA 90 bp | GTGTTGCCTATCAGGTTGAGAGAAAAATGGTGGTCAAAGTTAGCCATGCAAGGCCAGAAATTACTTCTTTaGCTGTTGGTTAACTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VLPIRLREKWWSKLAMQGQKLLL*LLVNSS Trigger: TGAAGAGTTAACCAACAGCCAAAGAAGTAATTTCTG...GCCTTGCATGGCTAACTTTGACCACCATTTTTCTCTCAACCTGATAGGCAACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR CCA 90 bp | GTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCCATACTTCTTTGGCTGTTaGTTAACTCTTCAGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: VGFSKNFLSSLPHDTRYPYFFGC*LTLQSV Trigger: CACACTCTGAAGAGTTAACCAACAGCCAAAGAAGTA...TGGGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR CCA 90 bp | ACCAGATACCCAAAAGATATCCCAAAGAATTGGGCTTTGGGCACTTCAAAAGAATTGCAAATGCTGAGATaGGACAGTGTAGTTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TRYPKDIPKNWALGTSKELQMLR*DSVVSS Trigger: AGAAGAAACTACACTGTCCCATCTCAGCATTTGCAA...TTCTTTTGAAGTGCCCAAAGCCCAATTCTTTGGGATATCTTTTGGGTATCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR CCA 90 bp | GTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCCAGATATCCCAAAGAATTaGGCTTTGGGCACTTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: VGFSKNFLSSLPHDTRYPDIPKN*ALGTSK Trigger: TTTTGAAGTGCCCAAAGCCCAATTCTTTGGGATATC...TGGGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| 3UTR CAA 72 bp | AAGTGTTCATCATTACAGAAATTACTTCTTTGGCTGTaGGTTAACTCTTCAGAGTGTGCCCTATCAAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: KCSSLQKLLLWL*VNSSECALSSA Trigger: AGCGCTTGATAGGGCACACTCTGAAGAGTTAACCAACAGCCAAAGAAGTAATTTCTGTAATGATGAACACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR CCA 90 bp | TTGTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCAGGTTGAGAGAAAAATaGTGGTCAAAGTTAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: LLVSPKTFFLHSHMIPDTRLREK*WSKLAM Trigger: CATGGCTAACTTTGACCACCATTTTTCTCTCAACCT...GGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR TCA 90 bp | TTGTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCGTTGATAATGGCTGCTaGCCTTACCAACATTATTTT | + |
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Preference number: 4 (lower is better) Translates to: LLVSPKTFFLHSHMIPDTVDNGC*PYQHYF Trigger: AAAATAATGTTGGTAAGGTCAGCAGCCATTATCAAC...GGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS GCA 90 bp | TGGGTTCTTAGATCAAGCCACACTTGGCAGTGTGTGGCTTGGGCCTaGTGCCCTCATGAAGTGGGAGTTGAATATGCCACATCAGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: WVLRSSHTWQCVAWA*CPHEVGVEYATSGA Trigger: GGCTCCTGATGTGGCATATTCAACTCCCACTTCATGAGGGCAGCAGGCCCAAGCCACACACTGCCAAGTGTGGCTTGATCTAAGAACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488296.1 |
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| CDS GCA 90 bp | GTTCTTAGATCAAGCCACACTTGGCAGTGTGTGGCTTGGGCCTGCTaGCCTCATGAAGTGGGAGTTGAATATGCCACATCAGGAGCCATC | + |
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Preference number: 5 (lower is better) Translates to: VLRSSHTWQCVAWAC*PHEVGVEYATSGAI Trigger: GATGGCTCCTGATGTGGCATATTCAACTCCCACTTCATGAGGGCAGCAGGCCCAAGCCACACACTGCCAAGTGTGGCTTGATCTAAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488296.1 |
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| CDS TCA 90 bp | CATCCCAGAAAAGGCAGGCTTGAGGGGGATGCAGGTGATACTGTCTaGGTCTGGAATCAAACAGCACCTGAACTTAGCTACCCTTGCACT | + |
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Preference number: 5 (lower is better) Translates to: HPRKGRLEGDAGDTV*VWNQTAPELSYPCT Trigger: AGTGCAAGGGTAGCTAAGTTCAGGTGCTGTTTGATTCCAGACTCAGACAGTATCACCTGCATCCCCCTCAAGCCTGCCTTTTCTGGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488296.1 |
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| CDS-3UTR CAA 90 bp | ACCAGATACCCAAAAGATATCCCAAAGAATTGGGCTTTGGGCACTTCAAAAGAACCATGCAAGGCCCTGTaGATAATGGCTGCTGACCTT | + |
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Preference number: 5 (lower is better) Translates to: TRYPKDIPKNWALGTSKEPCKAL*IMAADL Trigger: AAGGTCAGCAGCCATTATCAACAGGGCCTTGCATGG...TTCTTTTGAAGTGCCCAAAGCCCAATTCTTTGGGATATCTTTTGGGTATCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR CAA 90 bp | GTGTTGCCTATCAGGTTGAGAGAAAAATGGTGGTCAAAGTTAGCCATGCAAGGCTTGGAGAACAAAGGATaGAGGTGTTGCCTATCAGGT | + |
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Preference number: 5 (lower is better) Translates to: VLPIRLREKWWSKLAMQGLENKG*RCCLSG Trigger: ACCTGATAGGCAACACCTCAATCCTTTGTTCTCCAA...GCCTTGCATGGCTAACTTTGACCACCATTTTTCTCTCAACCTGATAGGCAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR CAA 90 bp | GTGTTGCCTATCAGGTTGAGAGAAAAATGGTGGTCAAAGTTAGCCATGCAAGGCTACCAACATTATTTTTaGCAAATGCTGAGATGGGAC | + |
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Preference number: 5 (lower is better) Translates to: VLPIRLREKWWSKLAMQGYQHYF*QMLRWD Trigger: GTCCCATCTCAGCATTTGCAAAAAATAATGTTGGTA...GCCTTGCATGGCTAACTTTGACCACCATTTTTCTCTCAACCTGATAGGCAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR CAA 90 bp | TTGTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCCAAAGGATTGAGGTGTaGCCTATCAGGTTGAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: LLVSPKTFFLHSHMIPDTQRIEV*PIRLRE Trigger: TTCTCTCAACCTGATAGGCAACACCTCAATCCTTTG...GGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR CAA 90 bp | TTGTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCCCAAAGAATTGGGCTTaGGGCACTTCAAAAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: LLVSPKTFFLHSHMIPDTPKNWA*GTSKET Trigger: TGTTTCTTTTGAAGTGCCCAAAGCCCAATTCTTTGG...GGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS-3UTR CAA 90 bp | TTGTTGGTTTCTCCAAAAACTTTCTTTCTTCACTCCCACATGATACCAGATACCTTACTTCTTTGGCTGTaGGTTAACTCTTCAGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: LLVSPKTFFLHSHMIPDTLLLWL*VNSSEC Trigger: ACACTCTGAAGAGTTAACCAACAGCCAAAGAAGTAA...GGTATCTGGTATCATGTGGGAGTGAAGAAAGAAAGTTTTTGGAGAAACCAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427190.6 |
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| CDS CAA 72 bp | GTGTGGCTTGGGCCTGCTGCCCTCATGAAGTGGGAGTaGAATATGCCACATCAGGAGCCATCCCAGAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: VWLGPAALMKWE*NMPHQEPSQKR Trigger: CCTTTTCTGGGATGGCTCCTGATGTGGCATATTCAACTCCCACTTCATGAGGGCAGCAGGCCCAAGCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488296.1 |
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| CDS GCA 72 bp | TCAAGCCACACTTGGCAGTGTGTGGCTTGGGCCTGCTaGCCTCATGAAGTGGGAGTTGAATATGCCACATCA | + |
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Preference number: 6 (lower is better) Translates to: SSHTWQCVAWAC*PHEVGVEYATS Trigger: TGATGTGGCATATTCAACTCCCACTTCATGAGGGCAGCAGGCCCAAGCCACACACTGCCAAGTGTGGCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488296.1 |
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| CDS GCA 72 bp | AGATCAAGCCACACTTGGCAGTGTGTGGCTTGGGCCTaGTGCCCTCATGAAGTGGGAGTTGAATATGCCACA | + |
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Preference number: 6 (lower is better) Translates to: RSSHTWQCVAWA*CPHEVGVEYAT Trigger: TGTGGCATATTCAACTCCCACTTCATGAGGGCAGCAGGCCCAAGCCACACACTGCCAAGTGTGGCTTGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488296.1 |
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| CDS CAA 90 bp | GGAGTTGAATATGCCACATCAGGAGCCATCCCAGAAAAGGCAGGCTaGAGGGGGATGCAGGTGATACTGTCTGAGTCTGGAATCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: GVEYATSGAIPEKAG*RGMQVILSESGIKQ Trigger: CTGTTTGATTCCAGACTCAGACAGTATCACCTGCATCCCCCTCAAGCCTGCCTTTTCTGGGATGGCTCCTGATGTGGCATATTCAACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488296.1 |
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