Pregenerated sensors for GJB7 (Homo sapiens)
Ensembl gene IDs: ENSG00000164411Ensembl transcript IDs: ENST00000369576.2, ENST00000442973.2, ENST00000525899.6
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCAGCTGGCTGCTATCCTATCCCACAGTTTTTCCCTGCAGAGATTaGGTAGGACAGGGAGTGGGGCCTTGGCTGCCACTTTGGAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: PSWLLSYPTVFPCRD*VGQGVGPWLPLWKD Trigger: ATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTGTCCTACTCAATCTCTGCAGGGAAAAACTGTGGGATAGGATAGCAGCCAGCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR GCA 90 bp | ATGTGCTTTGTCTTCCAACTCAGCTTAGGCCTTGCTGAGGAGGGATaGAGGTTTTCTTTGTTTAACCCTCTTGTGTGTCACAGAGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: MCFVFQLSLGLAEEG*RFSLFNPLVCHRVA Trigger: AGCTACTCTGTGACACACAAGAGGGTTAAACAAAGAAAACCTGCATCCCTCCTCAGCAAGGCCTAAGCTGAGTTGGAAGACAAAGCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR TCA 90 bp | ACAACTAATGTTATCCACATACTGGAGAACCCTACAACAAAACAATaGGACCTCTGTCTAGAGCTCATAACTGAAAGCATATTGACAATG | + |
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Preference number: 1 (lower is better) Translates to: TTNVIHILENPTTKQ*DLCLELITESILTM Trigger: CATTGTCAATATGCTTTCAGTTATGAGCTCTAGACAGAGGTCTCATTGTTTTGTTGTAGGGTTCTCCAGTATGTGGATAACATTAGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR CAA 90 bp | CTGCAGAGATTGAGTAGGACAGGGAGTGGGGCCTTGGCTGCCACTTaGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGGAGGCCATCAC | + |
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Preference number: 2 (lower is better) Translates to: LQRLSRTGSGALAAT*ERLPVPSFQLGGHH Trigger: GTGATGGCCTCCGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTGTCCTACTCAATCTCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTGCTATCCTATCCCACAGTTTTTCCCTGCAGAGATTGAGTAGGACAGGGCAGCTTAGGCCTTGCTaGGGAGGGATGCAGGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: LAAILSHSFSLQRLSRTGQLRPC*GGMQVF Trigger: GAAAACCTGCATCCCTCCTCAGCAAGGCCTAAGCTG...CCCTGTCCTACTCAATCTCTGCAGGGAAAAACTGTGGGATAGGATAGCAGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGGGAGTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCAATACTAAGGCTGATGTaGTTTGTCTTCCAACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: RTGSGALAATLERLPVPSILRLM*FVFQLS Trigger: GCTGAGTTGGAAGACAAAGCACATCAGCCTTAGTAT...TGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCTTAGGCCTTGCTGAGGAGGGATGCAGGTTTTCTTTGTTTAACCCTCTTGAGGGAGTGTGTTTATaGCCAAGTGTGAAGATTCTG | + |
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Preference number: 2 (lower is better) Translates to: LSLGLAEEGCRFSLFNPLEGVCL*PSVKIL Trigger: CAGAATCTTCACACTTGGCCATAAACACACTCCCTC...AAGAGGGTTAAACAAAGAAAACCTGCATCCCTCCTCAGCAAGGCCTAAGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR CAA 90 bp | TGCAGGTTTTCTTTGTTTAACCCTCTTGTGTGTCACAGAGTAGCTTaGCTTCAGGTAGAGGGAGTGTGTTTATGGCCAAGTGTGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: CRFSLFNPLVCHRVA*LQVEGVCLWPSVKI Trigger: AATCTTCACACTTGGCCATAAACACACTCCCTCTACCTGAAGCAAAGCTACTCTGTGACACACAAGAGGGTTAAACAAAGAAAACCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR CAA 90 bp | GGAAAGATTGCCAGTTCCTTCATTTCAGCTCGGAGGCCATCACATTaGCCTAAAGTGTCACTTTTTATATTTTCCAGTTCATTGTGCACC | + |
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Preference number: 2 (lower is better) Translates to: GKIASSFISARRPSH*PKVSLFIFSSSLCT Trigger: GGTGCACAATGAACTGGAAAATATAAAAAGTGACACTTTAGGCAAATGTGATGGCCTCCGAGCTGAAATGAAGGAACTGGCAATCTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR GCA 72 bp | CAGGGAGTGGGGCCTTGGCTGCCACTTTGGAAAGATTaGCAGTTCCTTCATTTCAGCTCGGAGGCCATCACA | + |
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Preference number: 3 (lower is better) Translates to: QGVGPWLPLWKD*QFLHFSSEAIT Trigger: TGTGATGGCCTCCGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR-3UTR CAA 90 bp | AGGACAGGGAGTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCATGTCACAGAGTAGCTTaGCTTCAGGTAGAGGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: RTGSGALAATLERLPVPSCHRVA*LQVEGV Trigger: CACTCCCTCTACCTGAAGCAAAGCTACTCTGTGACA...TGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR TCA 72 bp | TCCCTCTCCTCTAATCCACTTATATCCAAGGATCCCTaGATCGGCAAGAGGCCTGGGCTCTGTGGCCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: SLSSNPLISKDP*IGKRPGLCGLF Trigger: GAAAAGGCCACAGAGCCCAGGCCTCTTGCCGATTCAGGGATCCTTGGATATAAGTGGATTAGAGGAGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR GCA 72 bp | GTCTTCCAACTCAGCTTAGGCCTTGCTGAGGAGGGATaGAGGTTTTCTTTGTTTAACCCTCTTGTGTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: VFQLSLGLAEEG*RFSLFNPLVCH Trigger: GTGACACACAAGAGGGTTAAACAAAGAAAACCTGCATCCCTCCTCAGCAAGGCCTAAGCTGAGTTGGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR-3UTR CAA 90 bp | CTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGGAGGCCATCACATTTGCCGGATGCAGGTTTTCTTaGTTTAACCCTCTTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: LWKDCQFLHFSSEAITFAGCRFS*FNPLVC Trigger: ACACACAAGAGGGTTAAACAAAGAAAACCTGCATCC...GGCAAATGTGATGGCCTCCGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR TCA 72 bp | GTTATCCACATACTGGAGAACCCTACAACAAAACAATaGGACCTCTGTCTAGAGCTCATAACTGAAAGCATA | + |
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Preference number: 3 (lower is better) Translates to: VIHILENPTTKQ*DLCLELITESI Trigger: TATGCTTTCAGTTATGAGCTCTAGACAGAGGTCTCATTGTTTTGTTGTAGGGTTCTCCAGTATGTGGATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR CAA 72 bp | GGCTCTGTGGCCTTTTCCCTAGGCGGGACCTTCCTGTaGAATGTTCCTCTGTGTGTCCCCAGCTGGCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: GSVAFSLGGTFL*NVPLCVPSWLL Trigger: TAGCAGCCAGCTGGGGACACACAGAGGAACATTCAACAGGAAGGTCCCGCCTAGGGAAAAGGCCACAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR CAA 72 bp | GCTGCTATCCTATCCCACAGTTTTTCCCTGCAGAGATaGAGTAGGACAGGGAGTGGGGCCTTGGCTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: AAILSHSFSLQR*SRTGSGALAAT Trigger: AGTGGCAGCCAAGGCCCCACTCCCTGTCCTACTCAATCTCTGCAGGGAAAAACTGTGGGATAGGATAGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR TCA 90 bp | GCCAAGTGTGAAGATTCTGGAGTAGGGGAGGGGTCCCTCTCCTACCACATTCAACAGCTTAGGCCTTGCTaGGGAGGGATGCAGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: AKCEDSGVGEGSLSYHIQQLRPC*GGMQVF Trigger: GAAAACCTGCATCCCTCCTCAGCAAGGCCTAAGCTG...TTGAATGTGGTAGGAGAGGGACCCCTCCCCTACTCCAGAATCTTCACACTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | GTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGCAGGGAGTGGGGCCTTaGCTGCCACTTTGGAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: VGPWLPLWKDCQFLHFSSQGVGP*LPLWKD Trigger: ATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTG...CGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | AGGACAGGGAGTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCAAAATCACCCATCTTCTaGGTTGCTCACTCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RTGSGALAATLERLPVPSKSPIF*VAHSGS Trigger: GCTCCCAGAGTGAGCAACGCAGAAGATGGGTGATTT...TGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR CAA 72 bp | TTGAGTAGGACAGGGAGTGGGGCCTTGGCTGCCACTTaGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: LSRTGSGALAAT*ERLPVPSFQLG Trigger: TCCGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTGTCCTACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR TCA 90 bp | TGTGAAGATTCTGGAGTAGGGGAGGGGTCCCTCTCCTACCACATTCAACATATCATATCCAAGGATCCCTaGATCGGCAAGAGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CEDSGVGEGSLSYHIQHIISKDP*IGKRPG Trigger: CCCAGGCCTCTTGCCGATTCAGGGATCCTTGGATAT...GATATGTTGAATGTGGTAGGAGAGGGACCCCTCCCCTACTCCAGAATCTTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | GTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGACCCGGTACCTCGACTaGAAATGCAGAAATCACCCA | + |
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Preference number: 4 (lower is better) Translates to: VGPWLPLWKDCQFLHFSSTRYLD*KCRNHP Trigger: TGGGTGATTTCTGCATTTCCAGTCGAGGTACCGGGT...CGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR TCA 90 bp | GTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGTTTCTGACTCTAGAGTaGCCCTTTCGGATGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VGPWLPLWKDCQFLHFSSFLTLE*PFRMSA Trigger: AGCAGACATCCGAAAGGGTCACTCTAGAGTCAGAAA...CGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | GCCAAGTGTGAAGATTCTGGAGTAGGGGAGGGGTCCCTCTCCTACCACATTCAACGGGCTGTCTACTGTTaGACTCAAACTCTTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: AKCEDSGVGEGSLSYHIQRAVYC*TQTLSA Trigger: AGCAGAAAGAGTTTGAGTGCAACAGTAGACAGCCCG...TTGAATGTGGTAGGAGAGGGACCCCTCCCCTACTCCAGAATCTTCACACTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | TGTGAAGATTCTGGAGTAGGGGAGGGGTCCCTCTCCTACCACATTCAACATATCCATAGGGGAACATGGTaGTGTTTTGAGGAGACGCCG | + |
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Preference number: 4 (lower is better) Translates to: CEDSGVGEGSLSYHIQHIHRGTW*CFEETP Trigger: CGGCGTCTCCTCAAAACACCACCATGTTCCCCTATG...GATATGTTGAATGTGGTAGGAGAGGGACCCCTCCCCTACTCCAGAATCTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | GCCAAGTGTGAAGATTCTGGAGTAGGGGAGGGGTCCCTCTCCTACCACATTCAAACTCATAGGGGAACATaGTGGTGTTTTGAGGAGACG | + |
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Preference number: 4 (lower is better) Translates to: AKCEDSGVGEGSLSYHIQTHRGT*WCFEET Trigger: CGTCTCCTCAAAACACCACCATGTTCCCCTATGAGT...TTGAATGTGGTAGGAGAGGGACCCCTCCCCTACTCCAGAATCTTCACACTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | AGGACAGGGAGTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCAGAGGGAGTGTGTTTATaGCCAAGTGTGAAGATTCTG | + |
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Preference number: 4 (lower is better) Translates to: RTGSGALAATLERLPVPSEGVCL*PSVKIL Trigger: CAGAATCTTCACACTTGGCCATAAACACACTCCCTC...TGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | GTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGCCTTGGCTGCCACTTTaGAAAGATTGCCAGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VGPWLPLWKDCQFLHFSSPWLPL*KDCQFL Trigger: AAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGG...CGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | CTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGGAGGCCATCACATTTGCCCTGTGTGTCCCCAGCTaGCTGCTATCCTATCCCACA | + |
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Preference number: 4 (lower is better) Translates to: LWKDCQFLHFSSEAITFALCVPS*LLSYPT Trigger: TGTGGGATAGGATAGCAGCCAGCTGGGGACACACAG...GGCAAATGTGATGGCCTCCGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR TCA 90 bp | CTGGCTGCTATCCTATCCCACAGTTTTTCCCTGCAGAGATTGAGTAGGACAGGGAACATGGTGGTGTTTTaGGGAGACGCCGCTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LAAILSHSFSLQRLSRTGNMVVF*GDAAFL Trigger: AAGAAAAGCGGCGTCTCCTCAAAACACCACCATGTT...CCCTGTCCTACTCAATCTCTGCAGGGAAAAACTGTGGGATAGGATAGCAGCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR TCA 90 bp | GGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGGACACAATACACAAGCATaGGGTGATGACCAAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GALAATLERLPVPSFQLGHNTQA*GDDQEE Trigger: CTCTTCTTGGTCATCACCTCATGCTTGTGTATTGTG...TCCGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | GTCTTCCAACTCAGCTTAGGCCTTGCTGAGGAGGGATGCAGGTTTTCTTTGTTTTTTCCACACGTGCTCTaGTGCCACCATGTAGACCAG | + |
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Preference number: 4 (lower is better) Translates to: VFQLSLGLAEEGCRFSLFFPHVL*CHHVDQ Trigger: CTGGTCTACATGGTGGCAGCAGAGCACGTGTGGAAA...AAACAAAGAAAACCTGCATCCCTCCTCAGCAAGGCCTAAGCTGAGTTGGAAGAC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | AGGACAGGGAGTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCAAACTCTCTCGTTTCCTaGAGTTTCTTAGTGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RTGSGALAATLERLPVPSNSLVS*SFLVSW Trigger: CCAAGACACTAAGAAACTGCAGGAAACGAGAGAGTT...TGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | CTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGGAGGCCATCACATTTGCCCTCCAGTTTGTTCGGTaGTTCATCCATGGACACCCC | + |
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Preference number: 4 (lower is better) Translates to: LWKDCQFLHFSSEAITFALQFVR*FIHGHP Trigger: GGGGTGTCCATGGATGAAGCACCGAACAAACTGGAG...GGCAAATGTGATGGCCTCCGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | GGACCTGCTTTCCTTTCTGACTCTAGAGTGACCCTTTCGGATGTCTGCTGGTTCTTCCTATCAATGTGTTaGCTTCTGGGGGACCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: GPAFLSDSRVTLSDVCWFFLSMC*LLGDLL Trigger: AAGCAGGTCCCCCAGAAGGCAACACATTGATAGGAA...GAACCAGCAGACATCCGAAAGGGTCACTCTAGAGTCAGAAAGGAAAGCAGGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | AGGACAGGGAGTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCAGGAGGCCATCACATTTaGCTAAAGTGTCACTTTTTA | + |
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Preference number: 4 (lower is better) Translates to: RTGSGALAATLERLPVPSGGHHI*LKCHFL Trigger: TAAAAAGTGACACTTTAGGCAAATGTGATGGCCTCC...TGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | TGTCACAGAGTAGCTTTGCTTCAGGTAGAGGGAGTGTGTTTATGGCCAAGTGTGACCCTTTCGGATGTCTaGTGGTTCAGGCTTAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: CHRVALLQVEGVCLWPSVTLSDV*WFRLKW Trigger: CCACTTAAGCCTGAACCAGCAGACATCCGAAAGGGT...CACACTTGGCCATAAACACACTCCCTCTACCTGAAGCAAAGCTACTCTGTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | GGACCTGCTTTCCTTTCTGACTCTAGAGTGACCCTTTCGGATGTCTGCTGGTTCAGTTTCTTAGTGTCTTaGCTCACCAGACTCATAGGG | + |
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Preference number: 4 (lower is better) Translates to: GPAFLSDSRVTLSDVCWFSFLVS*LTRLIG Trigger: CCCTATGAGTCTGGTGAGCCAAGACACTAAGAAACT...GAACCAGCAGACATCCGAAAGGGTCACTCTAGAGTCAGAAAGGAAAGCAGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | AGGACAGGGAGTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCACACATTCTTTTTCTGTaGCCTCCACTTCCTATCAAT | + |
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Preference number: 4 (lower is better) Translates to: RTGSGALAATLERLPVPSHILFL*PPLPIN Trigger: ATTGATAGGAAGTGGAGGCCACAGAAAAAGAATGTG...TGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | CTGGCTGCTATCCTATCCCACAGTTTTTCCCTGCAGAGATTGAGTAGGACAGGGTACCTCGACTGGAAATaGAGAAATCACCCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LAAILSHSFSLQRLSRTGYLDWK*RNHPSS Trigger: AGAAGATGGGTGATTTCTGCATTTCCAGTCGAGGTA...CCCTGTCCTACTCAATCTCTGCAGGGAAAAACTGTGGGATAGGATAGCAGCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | AATTCCTCCCAAATGATACTAAGGCTGATGTGCTTTGTCTTCCAACTCAGCTTAGTGCTTTTTCAGCCCTaGGCCCAGTGTCTGGCACTC | + |
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Preference number: 4 (lower is better) Translates to: NSSQMILRLMCFVFQLSLVLFQP*AQCLAL Trigger: GAGTGCCAGACACTGGGCGCAGGGCTGAAAAAGCAC...TAAGCTGAGTTGGAAGACAAAGCACATCAGCCTTAGTATCATTTGGGAGGAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | GTCTTCCAACTCAGCTTAGGCCTTGCTGAGGAGGGATGCAGGTTTTCTTTGTTTGCCCAAAGTCTGACTTaGGAAATGGGGAAGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: VFQLSLGLAEEGCRFSLFAQSLT*EMGKKS Trigger: TGACTTCTTCCCCATTTCCCAAGTCAGACTTTGGGC...AAACAAAGAAAACCTGCATCCCTCCTCAGCAAGGCCTAAGCTGAGTTGGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR TCA 90 bp | CTCCCAAATGATACTAAGGCTGATGTGCTTTGTCTTCCAACTCAGCTTAGGCCTCACATTCAACATATCTaGGGCTGTGGCACTCACACA | + |
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Preference number: 4 (lower is better) Translates to: LPNDTKADVLCLPTQLRPHIQHI*GCGTHT Trigger: TGTGTGAGTGCCACAGCCTCAGATATGTTGAATGTG...AGGCCTAAGCTGAGTTGGAAGACAAAGCACATCAGCCTTAGTATCATTTGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR TCA 90 bp | AATTCCTCCCAAATGATACTAAGGCTGATGTGCTTTGTCTTCCAACTCAGCTTAGCGGGACCTTCCTGTTaGATGTTCCTCTGTGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: NSSQMILRLMCFVFQLSLAGPSC*MFLCVS Trigger: GGACACACAGAGGAACATTCAACAGGAAGGTCCCGC...TAAGCTGAGTTGGAAGACAAAGCACATCAGCCTTAGTATCATTTGGGAGGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | TGTGAAGATTCTGGAGTAGGGGAGGGGTCCCTCTCCTACCACATTCAACATATCATACTAAGGCTGATGTaGTTTGTCTTCCAACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: CEDSGVGEGSLSYHIQHIILRLM*FVFQLS Trigger: GCTGAGTTGGAAGACAAAGCACATCAGCCTTAGTAT...GATATGTTGAATGTGGTAGGAGAGGGACCCCTCCCCTACTCCAGAATCTTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | AGGTTTTCTTTGTTTAACCCTCTTGTGTGTCACAGAGTAGCTTTGCTTCAGGTAGAGTGGGGCCTTGGCTaGCACTTTGGAAAGATTGCC | + |
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Preference number: 4 (lower is better) Translates to: RFSLFNPLVCHRVALLQVEWGLG*HFGKIA Trigger: GGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCACTC...TACCTGAAGCAAAGCTACTCTGTGACACACAAGAGGGTTAAACAAAGAAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | GCCAAGTGTGAAGATTCTGGAGTAGGGGAGGGGTCCCTCTCCTACCACATTCAAATGTTATCCACATACTaGAGAACCCTACAACAAAAC | + |
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Preference number: 4 (lower is better) Translates to: AKCEDSGVGEGSLSYHIQMLSTY*RTLQQN Trigger: GTTTTGTTGTAGGGTTCTCCAGTATGTGGATAACAT...TTGAATGTGGTAGGAGAGGGACCCCTCCCCTACTCCAGAATCTTCACACTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | AGGTTTTCTTTGTTTAACCCTCTTGTGTGTCACAGAGTAGCTTTGCTTCAGGTAAGAAGGCAAGACTCTTaGGGGCTCCAGTTTGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: RFSLFNPLVCHRVALLQVRRQDS*GLQFVR Trigger: CCGAACAAACTGGAGCCCGCAAGAGTCTTGCCTTCT...TACCTGAAGCAAAGCTACTCTGTGACACACAAGAGGGTTAAACAAAGAAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | TGTCACAGAGTAGCTTTGCTTCAGGTAGAGGGAGTGTGTTTATGGCCAAGTGTGCCACTTTGGAAAGATTaGCAGTTCCTTCATTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CHRVALLQVEGVCLWPSVPLWKD*QFLHFS Trigger: GCTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGG...CACACTTGGCCATAAACACACTCCCTCTACCTGAAGCAAAGCTACTCTGTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | GTCTTCCAACTCAGCTTAGGCCTTGCTGAGGAGGGATGCAGGTTTTCTTTGTTTCCAGAAGTGAAGGTGTaGAGACCATTATCAGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: VFQLSLGLAEEGCRFSLFPEVKV*RPLSVV Trigger: TACAACTGATAATGGTCTCCACACCTTCACTTCTGG...AAACAAAGAAAACCTGCATCCCTCCTCAGCAAGGCCTAAGCTGAGTTGGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR TCA 90 bp | AATTCCTCCCAAATGATACTAAGGCTGATGTGCTTTGTCTTCCAACTCAGCTTAGTAAGGCCCAAAGTCTaGCTTGGGAAATGGGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: NSSQMILRLMCFVFQLSLVRPKV*LGKWGR Trigger: TCTTCCCCATTTCCCAAGTCAGACTTTGGGCCTTAC...TAAGCTGAGTTGGAAGACAAAGCACATCAGCCTTAGTATCATTTGGGAGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR GCA 90 bp | CTCCCAAATGATACTAAGGCTGATGTGCTTTGTCTTCCAACTCAGCTTAGGCCTCAAAACACACATTTTTaGAACCGGGCTGTCTACTGT | + |
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Preference number: 4 (lower is better) Translates to: LPNDTKADVLCLPTQLRPQNTHF*NRAVYC Trigger: ACAGTAGACAGCCCGGTTGCAAAAATGTGTGTTTTG...AGGCCTAAGCTGAGTTGGAAGACAAAGCACATCAGCCTTAGTATCATTTGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | CTCCCAAATGATACTAAGGCTGATGTGCTTTGTCTTCCAACTCAGCTTAGGCCTTCCATCCAGTCCCAGTaGAGTATTTATTTACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPNDTKADVLCLPTQLRPSIQSQ*SIYLLH Trigger: GTGGAGTAAATAAATACTCCACTGGGACTGGATGGA...AGGCCTAAGCTGAGTTGGAAGACAAAGCACATCAGCCTTAGTATCATTTGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| 3UTR CAA 72 bp | TCTTTGTTTAACCCTCTTGTGTGTCACAGAGTAGCTTaGCTTCAGGTAGAGGGAGTGTGTTTATGGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SLFNPLVCHRVA*LQVEGVCLWPS Trigger: ACTTGGCCATAAACACACTCCCTCTACCTGAAGCAAAGCTACTCTGTGACACACAAGAGGGTTAAACAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | AATTCCTCCCAAATGATACTAAGGCTGATGTGCTTTGTCTTCCAACTCAGCTTACTTTCGGATGTCTGCTaGTTCAGGCTTAAGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSSQMILRLMCFVFQLSLLSDVC*FRLKWD Trigger: ATCCCACTTAAGCCTGAACCAGCAGACATCCGAAAG...TAAGCTGAGTTGGAAGACAAAGCACATCAGCCTTAGTATCATTTGGGAGGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR TCA 90 bp | AGGTTTTCTTTGTTTAACCCTCTTGTGTGTCACAGAGTAGCTTTGCTTCAGGTACCATTGTACCTGGGCTaGCATAGAGTTTCTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RFSLFNPLVCHRVALLQVPLYLG*HRVSFC Trigger: ACAGAAAGAAACTCTATGTCAGCCCAGGTACAATGG...TACCTGAAGCAAAGCTACTCTGTGACACACAAGAGGGTTAAACAAAGAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR TCA 90 bp | AATTCCTCCCAAATGATACTAAGGCTGATGTGCTTTGTCTTCCAACTCAGCTTACCTACAACAAAACAATaGGACCTCTGTCTAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSSQMILRLMCFVFQLSLPTTKQ*DLCLEL Trigger: GAGCTCTAGACAGAGGTCTCATTGTTTTGTTGTAGG...TAAGCTGAGTTGGAAGACAAAGCACATCAGCCTTAGTATCATTTGGGAGGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CCA 90 bp | AGGTTTTCTTTGTTTAACCCTCTTGTGTGTCACAGAGTAGCTTTGCTTCAGGTACCCATCCATTGTACCTaGGCTGACATAGAGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RFSLFNPLVCHRVALLQVPIHCT*ADIEFL Trigger: AAGAAACTCTATGTCAGCCCAGGTACAATGGATGGG...TACCTGAAGCAAAGCTACTCTGTGACACACAAGAGGGTTAAACAAAGAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS CCA 90 bp | TGGGCGCCGGCCTTGCGGGCTCCAGTTTGTTCGGTGCTTCATCCATaGACACCCCCACCCCGAGAACTCTCTCGTTTCCTGCAGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WAPALRAPVCSVLHP*TPPPRELSRFLQFL Trigger: AAGAAACTGCAGGAAACGAGAGAGTTCTCGGGGTGGGGGTGTCCATGGATGAAGCACCGAACAAACTGGAGCCCGCAAGGCCGGCGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000442973.2 |
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| CDS CCA 90 bp | AAGGCAAGACTCTTGCGGGCTCCAGTTTGTTCGGTGCTTCATCCATaGACACCCCCACCCCGAGAACTCTCTCGTTTCCTGCAGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KARLLRAPVCSVLHP*TPPPRELSRFLQFL Trigger: AAGAAACTGCAGGAAACGAGAGAGTTCTCGGGGTGGGGGTGTCCATGGATGAAGCACCGAACAAACTGGAGCCCGCAAGAGTCTTGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | GGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGGACACCCATCTTCTGCGTaGCTCACTCTGGGAGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GALAATLERLPVPSFQLGHPSSA*LTLGAV Trigger: TACAGCTCCCAGAGTGAGCAACGCAGAAGATGGGTG...TCCGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | GTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGCTTGCGGGCTCCAGTTaGTTCGGTGCTTCATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VGPWLPLWKDCQFLHFSSLAGSS*FGASSM Trigger: CATGGATGAAGCACCGAACAAACTGGAGCCCGCAAG...CGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | GTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGCTTCCTATCAATGTGTaGCCTTCTGGGGGACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VGPWLPLWKDCQFLHFSSLPINV*PSGGPA Trigger: AGCAGGTCCCCCAGAAGGCAACACATTGATAGGAAG...CGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS GCA 90 bp | ATGAACCCGGTACCTCGACTGGAAATGCAGAAATCACCCATCTTCTaGGTTGCTCACTCTGGGAGCTGTAGACCGGAGCTGTTCCTATTC | + |
|
Preference number: 5 (lower is better) Translates to: MNPVPRLEMQKSPIF*VAHSGSCRPELFLF Trigger: GAATAGGAACAGCTCCGGTCTACAGCTCCCAGAGTGAGCAACGCAGAAGATGGGTGATTTCTGCATTTCCAGTCGAGGTACCGGGTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | CTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGGAGGCCATCACATTTGCCACAGGGAGTGGGGCCTaGGCTGCCACTTTGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LWKDCQFLHFSSEAITFATGSGA*AATLER Trigger: TCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTGT...GGCAAATGTGATGGCCTCCGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | GGACCTGCTTTCCTTTCTGACTCTAGAGTGACCCTTTCGGATGTCTGCTGGTTCTGTCACAGAGTAGCTTaGCTTCAGGTAGAGGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GPAFLSDSRVTLSDVCWFCHRVA*LQVEGV Trigger: CACTCCCTCTACCTGAAGCAAAGCTACTCTGTGACA...GAACCAGCAGACATCCGAAAGGGTCACTCTAGAGTCAGAAAGGAAAGCAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | AGGACAGGGAGTGGGGCCTTGGCTGCCACTTTGGAAAGATTGCCAGTTCCTTCAGCCACTTTGGAAAGATaGCCAGTTCCTTCATTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTGSGALAATLERLPVPSATLER*PVPSFQ Trigger: CTGAAATGAAGGAACTGGCAATCTTTCCAAAGTGGC...TGAAGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGCCCCACTCCCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | TGTCACAGAGTAGCTTTGCTTCAGGTAGAGGGAGTGTGTTTATGGCCAAGTGTGCCGGGCTGTCTACTGTaGCACTCAAACTCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CHRVALLQVEGVCLWPSVPGCLL*HSNSFC Trigger: GCAGAAAGAGTTTGAGTGCAACAGTAGACAGCCCGG...CACACTTGGCCATAAACACACTCCCTCTACCTGAAGCAAAGCTACTCTGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | TGTCACAGAGTAGCTTTGCTTCAGGTAGAGGGAGTGTGTTTATGGCCAAGTGTGGGCCCAAAGTCTGACTaGGGAAATGGGGAAGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CHRVALLQVEGVCLWPSVGPKSD*GNGEEV Trigger: GACTTCTTCCCCATTTCCCAAGTCAGACTTTGGGCC...CACACTTGGCCATAAACACACTCCCTCTACCTGAAGCAAAGCTACTCTGTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | GTCTTCCAACTCAGCTTAGGCCTTGCTGAGGAGGGATGCAGGTTTTCTTTGTTTAAGAAGGCAAGACTCTaGCGGGCTCCAGTTTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VFQLSLGLAEEGCRFSLFKKARL*RAPVCS Trigger: CGAACAAACTGGAGCCCGCAAGAGTCTTGCCTTCTT...AAACAAAGAAAACCTGCATCCCTCCTCAGCAAGGCCTAAGCTGAGTTGGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | CTTTGGAAAGATTGCCAGTTCCTTCATTTCAGCTCGGAGGCCATCACATTTGCCGAACATGGTGGTGTTTaGAGGAGACGCCGCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LWKDCQFLHFSSEAITFAEHGGV*RRRRFS Trigger: AGAAAAGCGGCGTCTCCTCAAAACACCACCATGTTC...GGCAAATGTGATGGCCTCCGAGCTGAAATGAAGGAACTGGCAATCTTTCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | CTGGCTGCTATCCTATCCCACAGTTTTTCCCTGCAGAGATTGAGTAGGACAGGGGGATGCAGGTTTTCTTaGTTTAACCCTCTTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LAAILSHSFSLQRLSRTGGCRFS*FNPLVC Trigger: ACACACAAGAGGGTTAAACAAAGAAAACCTGCATCC...CCCTGTCCTACTCAATCTCTGCAGGGAAAAACTGTGGGATAGGATAGCAGCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | CTCCCAAATGATACTAAGGCTGATGTGCTTTGTCTTCCAACTCAGCTTAGGCCTCAGTTTCTTAGTGTCTaGGCTCACCAGACTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPNDTKADVLCLPTQLRPQFLSV*AHQTHR Trigger: CCTATGAGTCTGGTGAGCCAAGACACTAAGAAACTG...AGGCCTAAGCTGAGTTGGAAGACAAAGCACATCAGCCTTAGTATCATTTGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | AGGTTTTCTTTGTTTAACCCTCTTGTGTGTCACAGAGTAGCTTTGCTTCAGGTAGGCGGGACCTTCCTGTaGAATGTTCCTCTGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RFSLFNPLVCHRVALLQVGGTFL*NVPLCV Trigger: GACACACAGAGGAACATTCAACAGGAAGGTCCCGCC...TACCTGAAGCAAAGCTACTCTGTGACACACAAGAGGGTTAAACAAAGAAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | CTCCCAAATGATACTAAGGCTGATGTGCTTTGTCTTCCAACTCAGCTTAGGCCTCGGAGGCCATCACATTaGCCTAAAGTGTCACTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPNDTKADVLCLPTQLRPRRPSH*PKVSLF Trigger: AAAAAGTGACACTTTAGGCAAATGTGATGGCCTCCG...AGGCCTAAGCTGAGTTGGAAGACAAAGCACATCAGCCTTAGTATCATTTGGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS-3UTR CAA 90 bp | AGGTTTTCTTTGTTTAACCCTCTTGTGTGTCACAGAGTAGCTTTGCTTCAGGTAGCCTTGGCTGCCACTTaGGAAAGATTGCCAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RFSLFNPLVCHRVALLQVALAAT*ERLPVP Trigger: AGGAACTGGCAATCTTTCCAAAGTGGCAGCCAAGGC...TACCTGAAGCAAAGCTACTCTGTGACACACAAGAGGGTTAAACAAAGAAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS CCA 72 bp | CCGCGAAAGGTAAGCGGCGGCTTCGGTGGTGTTGAGTaGCTGGGCGCCGGCCTTGCGGGCTCCAGTTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PRKVSGGFGGVE*LGAGLAGSSLF Trigger: GAACAAACTGGAGCCCGCAAGGCCGGCGCCCAGCCACTCAACACCACCGAAGCCGCCGCTTACCTTTCGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442973.2 |
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| CDS GCA 72 bp | GCTGGGCGCCGGCCTTGCGGGCTCCAGTTTGTTCGGTaGTTCATCCATGGACACCCCCACCCCGAGAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: AGRRPCGLQFVR*FIHGHPHPENS Trigger: AGAGTTCTCGGGGTGGGGGTGTCCATGGATGAAGCACCGAACAAACTGGAGCCCGCAAGGCCGGCGCCCAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000442973.2 |
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| CDS CCA 72 bp | GCCTTGCGGGCTCCAGTTTGTTCGGTGCTTCATCCATaGACACCCCCACCCCGAGAACTCTCTCGTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALRAPVCSVLHP*TPPPRELSRFL Trigger: CAGGAAACGAGAGAGTTCTCGGGGTGGGGGTGTCCATGGATGAAGCACCGAACAAACTGGAGCCCGCAAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000442973.2 |
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| CDS CCA 72 bp | CTCTTGCGGGCTCCAGTTTGTTCGGTGCTTCATCCATaGACACCCCCACCCCGAGAACTCTCTCGTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLRAPVCSVLHP*TPPPRELSRFL Trigger: CAGGAAACGAGAGAGTTCTCGGGGTGGGGGTGTCCATGGATGAAGCACCGAACAAACTGGAGCCCGCAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS GCA 72 bp | AGAAGGCAAGACTCTTGCGGGCTCCAGTTTGTTCGGTaGTTCATCCATGGACACCCCCACCCCGAGAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: RRQDSCGLQFVR*FIHGHPHPENS Trigger: AGAGTTCTCGGGGTGGGGGTGTCCATGGATGAAGCACCGAACAAACTGGAGCCCGCAAGAGTCTTGCCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS CAA 90 bp | ACCCGGTACCTCGACTGGAAATGCAGAAATCACCCATCTTCTGCGTaGCTCACTCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TRYLDWKCRNHPSSA*LTLGAVDRSCSYSA Trigger: GGCTGAATAGGAACAGCTCCGGTCTACAGCTCCCAGAGTGAGCAACGCAGAAGATGGGTGATTTCTGCATTTCCAGTCGAGGTACCGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS GCA 72 bp | TTTGTCATAGTGCGGACACTCGTGCTTTTTCAGCCCTaGGCCCAGTGTCTGGCACTCCCTAGTGAGATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FVIVRTLVLFQP*AQCLALPSEMN Trigger: GTTCATCTCACTAGGGAGTGCCAGACACTGGGCGCAGGGCTGAAAAAGCACGAGTGTCCGCACTATGACAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000442973.2 ENST00000525899.6 |
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| CDS GCA 72 bp | GTACCTCGACTGGAAATGCAGAAATCACCCATCTTCTaGGTTGCTCACTCTGGGAGCTGTAGACCGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VPRLEMQKSPIF*VAHSGSCRPEL Trigger: CAGCTCCGGTCTACAGCTCCCAGAGTGAGCAACGCAGAAGATGGGTGATTTCTGCATTTCCAGTCGAGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS CAA 72 bp | CTCGACTGGAAATGCAGAAATCACCCATCTTCTGCGTaGCTCACTCTGGGAGCTGTAGACCGGAGCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LDWKCRNHPSSA*LTLGAVDRSCS Trigger: GGAACAGCTCCGGTCTACAGCTCCCAGAGTGAGCAACGCAGAAGATGGGTGATTTCTGCATTTCCAGTCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS CAA 72 bp | CGAGAACTCTCTCGTTTCCTGCAGTTTCTTAGTGTCTaGGCTCACCAGACTCATAGGGGAACATGGTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RELSRFLQFLSV*AHQTHRGTWWC Trigger: ACACCACCATGTTCCCCTATGAGTCTGGTGAGCCAAGACACTAAGAAACTGCAGGAAACGAGAGAGTTCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000442973.2 ENST00000525899.6 |
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| CDS CCA 72 bp | GAGAACTCTCTCGTTTCCTGCAGTTTCTTAGTGTCTTaGCTCACCAGACTCATAGGGGAACATGGTGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ENSLVSCSFLVS*LTRLIGEHGGV Trigger: AACACCACCATGTTCCCCTATGAGTCTGGTGAGCCAAGACACTAAGAAACTGCAGGAAACGAGAGAGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000442973.2 ENST00000525899.6 |
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| CDS TCA 72 bp | ACTCAGTTCAATGAAATTCAACACAATACACAAGCATaGGGTGATGACCAAGAAGAGGATGAAGATCGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: TQFNEIQHNTQA*GDDQEEDEDRL Trigger: AAGACGATCTTCATCCTCTTCTTGGTCATCACCTCATGCTTGTGTATTGTGTTGAATTTCATTGAACTGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525899.6 |
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| CDS CCA 72 bp | GGCTCAAAAGAAGGCAAGACTCTCTTTACACAGATGTaGAGATTAATAAGAGATCCAGTCAGTTACTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: GSKEGKTLFTQM*RLIRDPVSYSF Trigger: AAATGAGTAACTGACTGGATCTCTTATTAATCTCCACATCTGTGTAAAGAGAGTCTTGCCTTCTTTTGAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369576.2 |
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