Pregenerated sensors for GJB4 (Homo sapiens)
Ensembl gene IDs: ENSG00000189433Ensembl transcript IDs: ENST00000339480.3
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCACGTATCGGGTAGGCATTCCCGGCACCGAGGCCGCCGGTGCCTaGGGCCGAAGATCTCCATGCACCTCTTGCCCACCAGGTAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: GTYRVGIPGTEAAGA*GRRSPCTSCPPGRR Trigger: TCTTCTACCTGGTGGGCAAGAGGTGCATGGAGATCTTCGGCCCCAGGCACCGGCGGCCTCGGTGCCGGGAATGCCTACCCGATACGTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS GCA 90 bp | GCTGGCTGTGTCCTGGGTGCTGCACGTGGAAGGTCTATACCTGGGTaGTACCTGCCCACTCAGGCCTTGGGAGCCTTGAGGCCTGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: AGCVLGAARGRSIPG*YLPTQALGALRPGG Trigger: TCCCCCAGGCCTCAAGGCTCCCAAGGCCTGAGTGGGCAGGTAGCACCCAGGTATAGACCTTCCACGTGCAGCACCCAGGACACAGCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS GCA 90 bp | GGGGCCGACCCAGCCTTCATTAGGACAGAGTTCCCATCCTCAGGGTaGCCTCCCTGGGAGAGGACATATGGTGGGCACGTATCGGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: GADPAFIRTEFPSSG*PPWERTYGGHVSGR Trigger: CCTACCCGATACGTGCCCACCATATGTCCTCTCCCAGGGAGGGCACCCTGAGGATGGGAACTCTGTCCTAATGAAGGCTGGGTCGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS GCA 90 bp | GGCCCTGCAGAAATGCCCAGTTCATGCTGGCTGTGTCCTGGGTGCTaGACGTGGAAGGTCTATACCTGGGTGCTACCTGCCCACTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: GPAEMPSSCWLCPGC*TWKVYTWVLPAHSG Trigger: GCCTGAGTGGGCAGGTAGCACCCAGGTATAGACCTTCCACGTGCAGCACCCAGGACACAGCCAGCATGAACTGGGCATTTCTGCAGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS GCA 90 bp | GCAGGCCCTGCAGAAATGCCCAGTTCATGCTGGCTGTGTCCTGGGTaGTGCACGTGGAAGGTCTATACCTGGGTGCTACCTGCCCACTCA | + |
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Preference number: 5 (lower is better) Translates to: AGPAEMPSSCWLCPG*CTWKVYTWVLPAHS Trigger: TGAGTGGGCAGGTAGCACCCAGGTATAGACCTTCCACGTGCAGCACCCAGGACACAGCCAGCATGAACTGGGCATTTCTGCAGGGCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS CCA 90 bp | GCAGAAATGCCCAGTTCATGCTGGCTGTGTCCTGGGTGCTGCACGTaGAAGGTCTATACCTGGGTGCTACCTGCCCACTCAGGCCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: AEMPSSCWLCPGCCT*KVYTWVLPAHSGLG Trigger: CCCAAGGCCTGAGTGGGCAGGTAGCACCCAGGTATAGACCTTCCACGTGCAGCACCCAGGACACAGCCAGCATGAACTGGGCATTTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS CCA 90 bp | CTCAGCAGGCCCTGCAGAAATGCCCAGTTCATGCTGGCTGTGTCCTaGGTGCTGCACGTGGAAGGTCTATACCTGGGTGCTACCTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: LSRPCRNAQFMLAVS*VLHVEGLYLGATCP Trigger: TGGGCAGGTAGCACCCAGGTATAGACCTTCCACGTGCAGCACCCAGGACACAGCCAGCATGAACTGGGCATTTCTGCAGGGCCTGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS CCA 90 bp | CCAGCCTTCATTAGGACAGAGTTCCCATCCTCAGGGTGCCCTCCCTaGGAGAGGACATATGGTGGGCACGTATCGGGTAGGCATTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: PAFIRTEFPSSGCPP*ERTYGGHVSGRHSR Trigger: CCGGGAATGCCTACCCGATACGTGCCCACCATATGTCCTCTCCCAGGGAGGGCACCCTGAGGATGGGAACTCTGTCCTAATGAAGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS CCA 90 bp | TGTTCACGCCACTCAGCAGGCCCTGCAGAAATGCCCAGTTCATGCTaGCTGTGTCCTGGGTGCTGCACGTGGAAGGTCTATACCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: CSRHSAGPAEMPSSC*LCPGCCTWKVYTWV Trigger: CACCCAGGTATAGACCTTCCACGTGCAGCACCCAGGACACAGCCAGCATGAACTGGGCATTTCTGCAGGGCCTGCTGAGTGGCGTGAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS CCA 90 bp | CTCATTTCACAAAGAGTAAGTGAAGGCCCAGAGATACCTGCCCAATaGTCCACAGATGGAAGTAGCAGAGCTAATCTTGCACTTTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LISQRVSEGPEIPAQ*STDGSSRANLALWS Trigger: AGACCAAAGTGCAAGATTAGCTCTGCTACTTCCATCTGTGGACCATTGGGCAGGTATCTCTGGGCCTTCACTTACTCTTTGTGAAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS GCA 72 bp | GTATCGGGTAGGCATTCCCGGCACCGAGGCCGCCGGTaGCTGGGGCCGAAGATCTCCATGCACCTCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: VSGRHSRHRGRR*LGPKISMHLLP Trigger: GGGCAAGAGGTGCATGGAGATCTTCGGCCCCAGGCACCGGCGGCCTCGGTGCCGGGAATGCCTACCCGATAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS GCA 72 bp | GTCCTGGGTGCTGCACGTGGAAGGTCTATACCTGGGTaGTACCTGCCCACTCAGGCCTTGGGAGCCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: VLGAARGRSIPG*YLPTQALGALR Trigger: CCTCAAGGCTCCCAAGGCCTGAGTGGGCAGGTAGCACCCAGGTATAGACCTTCCACGTGCAGCACCCAGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS CCA 72 bp | CCCAGTTCATGCTGGCTGTGTCCTGGGTGCTGCACGTaGAAGGTCTATACCTGGGTGCTACCTGCCCACTCA | + |
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Preference number: 6 (lower is better) Translates to: PSSCWLCPGCCT*KVYTWVLPAHS Trigger: TGAGTGGGCAGGTAGCACCCAGGTATAGACCTTCCACGTGCAGCACCCAGGACACAGCCAGCATGAACTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS GCA 72 bp | GAAATGCCCAGTTCATGCTGGCTGTGTCCTGGGTGCTaGACGTGGAAGGTCTATACCTGGGTGCTACCTGCC | + |
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Preference number: 6 (lower is better) Translates to: EMPSSCWLCPGC*TWKVYTWVLPA Trigger: GGCAGGTAGCACCCAGGTATAGACCTTCCACGTGCAGCACCCAGGACACAGCCAGCATGAACTGGGCATTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS GCA 72 bp | CCAGCCTTCATTAGGACAGAGTTCCCATCCTCAGGGTaGCCTCCCTGGGAGAGGACATATGGTGGGCACGTA | + |
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Preference number: 6 (lower is better) Translates to: PAFIRTEFPSSG*PPWERTYGGHV Trigger: TACGTGCCCACCATATGTCCTCTCCCAGGGAGGGCACCCTGAGGATGGGAACTCTGTCCTAATGAAGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS CCA 72 bp | CACTCAGCAGGCCCTGCAGAAATGCCCAGTTCATGCTaGCTGTGTCCTGGGTGCTGCACGTGGAAGGTCTAT | + |
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Preference number: 6 (lower is better) Translates to: HSAGPAEMPSSC*LCPGCCTWKVY Trigger: ATAGACCTTCCACGTGCAGCACCCAGGACACAGCCAGCATGAACTGGGCATTTCTGCAGGGCCTGCTGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS GCA 72 bp | GCAGAAATGCCCAGTTCATGCTGGCTGTGTCCTGGGTaGTGCACGTGGAAGGTCTATACCTGGGTGCTACCT | + |
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Preference number: 6 (lower is better) Translates to: AEMPSSCWLCPG*CTWKVYTWVLP Trigger: AGGTAGCACCCAGGTATAGACCTTCCACGTGCAGCACCCAGGACACAGCCAGCATGAACTGGGCATTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS TCA 72 bp | AGGGATTGCCCCTGTCCTCATTTCACAAAGAGTAAGTaGAGGCCCAGAGATACCTGCCCAATGGTCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: RDCPCPHFTKSK*RPRDTCPMVHR Trigger: TCTGTGGACCATTGGGCAGGTATCTCTGGGCCTTCACTTACTCTTTGTGAAATGAGGACAGGGGCAATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS CCA 72 bp | CAAAGAGTAAGTGAAGGCCCAGAGATACCTGCCCAATaGTCCACAGATGGAAGTAGCAGAGCTAATCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: QRVSEGPEIPAQ*STDGSSRANLA Trigger: TGCAAGATTAGCTCTGCTACTTCCATCTGTGGACCATTGGGCAGGTATCTCTGGGCCTTCACTTACTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS CAA 72 bp | TTCAGGTTCCAAAATCAGGGTCTACCTTATTCCTTCTaGGGTCCAGTAGCTGCTTCCTTGTCCTTGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: FRFQNQGLPYSF*GPVAASLSLGL Trigger: CAAGCCCAAGGACAAGGAAGCAGCTACTGGACCCAAGAAGGAATAAGGTAGACCCTGATTTTGGAACCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS CAA 72 bp | CCCAATGGTCCACAGATGGAAGTAGCAGAGCTAATCTaGCACTTTGGTCTTCAGGTTCCAAAATCAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PNGPQMEVAELI*HFGLQVPKSGS Trigger: AGACCCTGATTTTGGAACCTGAAGACCAAAGTGCAAGATTAGCTCTGCTACTTCCATCTGTGGACCATTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS CAA 72 bp | GGAACCTGGAGATGGGCACCCTTAATGCTGGTGCGATaGACAAAATCTTTTCACAATCACCGTGTCATCATG | + |
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Preference number: 6 (lower is better) Translates to: GTWRWAPLMLVR*TKSFHNHRVIM Trigger: CATGATGACACGGTGATTGTGAAAAGATTTTGTCAATCGCACCAGCATTAAGGGTGCCCATCTCCAGGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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| CDS CCA 72 bp | TCCACAGATGGAAGTAGCAGAGCTAATCTTGCACTTTaGTCTTCAGGTTCCAAAATCAGGGTCTACCTTATT | + |
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Preference number: 6 (lower is better) Translates to: STDGSSRANLAL*SSGSKIRVYLI Trigger: AATAAGGTAGACCCTGATTTTGGAACCTGAAGACCAAAGTGCAAGATTAGCTCTGCTACTTCCATCTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339480.3 |
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