RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GIT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000139436

Ensembl transcript IDs: ENST00000320063.10, ENST00000354574.8, ENST00000355312.8, ENST00000361006.9, ENST00000457474.6, ENST00000546613.5, ENST00000547267.2, ENST00000547694.2, ENST00000547815.5, ENST00000548000.5, ENST00000548643.5, ENST00000548655.5, ENST00000549999.1, ENST00000550186.5, ENST00000550480.1, ENST00000551209.5, ENST00000551455.5, ENST00000551721.1, ENST00000552978.5, ENST00000553118.5

Found 1428 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCGGTGGGCTCCCCATAGTCTCCTCTGCCCTGCTGCCGTGTACCTaGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCT +
Preference number: 1 (lower is better)
Translates to: GGGLPIVSSALLPCT*LPSLIHITGPRPGS
Trigger: AGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGTACACGGCAGCAGGGCAGAGGAGACTATGGGGAGCCCACCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTaGTCCAGGTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGC +
Preference number: 1 (lower is better)
Translates to: NTQGWPAPLRVRLRG*SRCVRGSQALTLHS
Trigger: GCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACACCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 90 bp GATGAGGCCAAGGAAATGCGCGGGGCACATACAGAGAGGACGACCTaGAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTG +
Preference number: 1 (lower is better)
Translates to: DEAKEMRGAHTERTT*SPPMATSFHRGTCL
Trigger: CAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATTTCCTTGGCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 90 bp GGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAAGGAAATaGGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGG +
Preference number: 1 (lower is better)
Translates to: GAENSDTRSQMRPRK*AGHIQRGRPAALQW
Trigger: CCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATTTCCTTGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 90 bp CAGACAGCTCATTTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTaGGACAGCAGGGGCAGGGGTTTGCAAGATAAAGGAGGGTCAGCT +
Preference number: 1 (lower is better)
Translates to: QTAHFPEASTEARPP*DSRGRGLQDKGGSA
Trigger: AGCTGACCCTCCTTTATCTTGCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAAATGAGCTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 90 bp GCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATaGGGCCAAGGAAATGCGCGGGGCACATACAGAGAGGACGACCTG +
Preference number: 1 (lower is better)
Translates to: AICQQEQRTLTPDLR*GQGNARGTYREDDL
Trigger: CAGGTCGTCCTCTCTGTATGTGCCCCGCGCATTTCCTTGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 90 bp ATGGTTTCTGACCTGATCCGGTCTCGTACATGGACATGGGCCTACTaGCCCGGGCAGACGGACGTCTCTTTAAGGAAGAGTGGTTGGAAG +
Preference number: 1 (lower is better)
Translates to: MVSDLIRSRTWTWAY*PGQTDVSLRKSGWK
Trigger: CTTCCAACCACTCTTCCTTAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGACCGGATCAGGTCAGAAACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR TCA 90 bp TTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTGAGTaGTCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTCTCCT +
Preference number: 1 (lower is better)
Translates to: FAWMLHAARLLPSGE*SSFGQGWNIWPFSP
Trigger: AGGAGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR TCA 90 bp CATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTaGGTGATCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTC +
Preference number: 1 (lower is better)
Translates to: HLRMDAPRSTLASVW*VIIFRPGLEYLAFL
Trigger: GAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR GCA 90 bp TCACTTGGAGGCCCTGAATGCTCCTTCCATTCCTCACATGCAGGCTaGTCCATGGTGCTGGATGGATTAGAGTTAAGGGGTCAGCAGGGA +
Preference number: 1 (lower is better)
Translates to: SLGGPECSFHSSHAG*SMVLDGLELRGQQG
Trigger: TCCCTGCTGACCCCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR GCA 90 bp ACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTaGGCCTTCATCTTCCATGGACATTCTATAAGCTGGGTGTGGTGT +
Preference number: 1 (lower is better)
Translates to: TPFTTSILRRVLPFW*AFIFHGHSISWVWC
Trigger: ACACCACACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR GCA 90 bp CTCTTTGGCATCTGGCATTTTAAACACCATTCACCACGTCCATTCTaGGCAGGGTCCTTCCCTTCTGGTGCGCCTTCATCTTCCATGGAC +
Preference number: 1 (lower is better)
Translates to: LFGIWHFKHHSPRPF*AGSFPSGAPSSSMD
Trigger: GTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAATGCCAGATGCCAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR GCA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTaGTTCCGTCTGGTGAGTGATCATCTTTCGGCCAGGGCTGGAATA +
Preference number: 1 (lower is better)
Translates to: SMELTSSHGCSTQHA*FRLVSDHLSARAGI
Trigger: TATTCCAGCCCTGGCCGAAAGATGATCACTCACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR CCA 90 bp AAGGCATCCCGGGAGCATCCAACAGCAATGTGGCACTTAGGGCTGTaGGACAAACAAGTGGAAGAGTCTTTTGGAGACGTGGACCCTTTT +
Preference number: 1 (lower is better)
Translates to: KASREHPTAMWHLGL*DKQVEESFGDVDPF
Trigger: AAAAGGGTCCACGTCTCCAAAAGACTCTTCCACTTGTTTGTCCCACAGCCCTAAGTGCCACATTGCTGTTGGATGCTCCCGGGATGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 90 bp CCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTaGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCTTACAA +
Preference number: 1 (lower is better)
Translates to: PPMATSFHRGTCLEF*HRGLTEHSSDIFLQ
Trigger: TTGTAAGAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 90 bp AAATGTTCAGATAAGGTGCGATTTGCCAACAGGAGCAGAGAACTCTaGCACCAGATCTCAGATGAGGCCAAGGAAATGCGCGGGGCACAT +
Preference number: 1 (lower is better)
Translates to: KCSDKVRFANRSREL*HQISDEAKEMRGAH
Trigger: ATGTGCCCCGCGCATTTCCTTGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCACCTTATCTGAACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 90 bp AATCTGAGCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTaGGGTAGCAGGCAGCCAGCTAGAGCACACTCTCTAAGGAACTCT +
Preference number: 1 (lower is better)
Translates to: NLSMFQHFNLTLSEL*GSRQPARAHSLRNS
Trigger: AGAGTTCCTTAGAGAGTGTGCTCTAGCTGGCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGCTCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 90 bp GGAAGGGTGGCATATGGGGAGGAAGGGATCATTGAGAATACAGGGTaGAAAAGAACGACGTTACTGAAGGTAGACATTGCTAGTGCAAGG +
Preference number: 1 (lower is better)
Translates to: GRVAYGEEGIIENTG*KRTTLLKVDIASAR
Trigger: CCTTGCACTAGCAATGTCTACCTTCAGTAACGTCGTTCTTTTTCACCCTGTATTCTCAATGATCCCTTCCTCCCCATATGCCACCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 90 bp GCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTaGTTCACCTCCTGCAGACAGCTCATTTCCCAGAAGCCTCTACAG +
Preference number: 1 (lower is better)
Translates to: ATSSIAGPQTFQGKH*FTSCRQLISQKPLQ
Trigger: CTGTAGAGGCTTCTGGGAAATGAGCTGTCTGCAGGAGGTGAAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 90 bp GGAATCCATGTGCAAAAGGTGGCTGGAACAAATGTTCAGATAAGGTaGGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAG +
Preference number: 1 (lower is better)
Translates to: GIHVQKVAGTNVQIR*DLPTGAENSDTRSQ
Trigger: CTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCACCTTATCTGAACATTTGTTCCAGCCACCTTTTGCACATGGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 90 bp CTTCCCTTCTGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTaGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGT +
Preference number: 1 (lower is better)
Translates to: LPFWCAFIFHGHSIS*VWCEFSCLLFDRDC
Trigger: ACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR TCA 90 bp GTGAGCTGGCAGCCTAGAGGACACAGCTCACCTGCACATGGTCTCTaGAAGTGTTCAAATTGGTTGCCAACATTTATAAATGGAGAGATG +
Preference number: 1 (lower is better)
Translates to: VSWQPRGHSSPAHGL*KCSNWLPTFINGEM
Trigger: CATCTCTCCATTTATAAATGTTGGCAACCAATTTGAACACTTTCAGAGACCATGTGCAGGTGAGCTGTGTCCTCTAGGCTGCCAGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 90 bp AAAGCATCCACACACGGTGACTTAGTAAAGCAAGCACCGTCGGGGTaGTACTTTCATGACAGCATATGGTCAAGCTATAAAGGTGTGCAT +
Preference number: 1 (lower is better)
Translates to: KASTHGDLVKQAPSG*YFHDSIWSSYKGVH
Trigger: ATGCACACCTTTATAGCTTGACCATATGCTGTCATGAAAGTAGCACCCCGACGGTGCTTGCTTTACTAAGTCACCGTGTGTGGATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 90 bp AACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTaGCATATTCTTACAACTGGAAATGCTTTGTTGGTCCCCATGTTC +
Preference number: 1 (lower is better)
Translates to: NLFGVLAPWANRALF*HILTTGNALLVPMF
Trigger: GAACATGGGGACCAACAAAGCATTTCCAGTTGTAAGAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 90 bp AGCCGTGCACAGCTCCCGAGTTGTGCGTTTAGAATTCTGATTACATaGAATGCTGTGTTTGATCTTTGGGCCCAATTCACTGTTCTTTGG +
Preference number: 1 (lower is better)
Translates to: SRAQLPSCAFRILIT*NAVFDLWAQFTVLW
Trigger: CCAAAGAACAGTGAATTGGGCCCAAAGATCAAACACAGCATTTCATGTAATCAGAATTCTAAACGCACAACTCGGGAGCTGTGCACGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 90 bp TGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTaGCCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAAC +
Preference number: 1 (lower is better)
Translates to: WCEFSCLLFDRDCKI*PNSPPVPRFKSTSN
Trigger: GTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR TCA 90 bp TTAACATATCACGAAGAAAACTGGAAACCTATTGATCTATGGAATTaGCATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTC +
Preference number: 1 (lower is better)
Translates to: LTYHEENWKPIDLWN*HLRMDAPRSTLASV
Trigger: GACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAATAGGTTTCCAGTTTTCTTCGTGATATGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR TCA 90 bp GAAGAGTGGTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTaGTATACATTGGTTGTGGCCTGTTTCCTGAGGTTCGAATTTTCA +
Preference number: 1 (lower is better)
Translates to: EEWLEVSVYSEPVCT*YTLVVACFLRFEFS
Trigger: TGAAAATTCGAACCTCAGGAAACAGGCCACAACCAATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAACCACTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR CCA 90 bp TTCTGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTGGGTGTaGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATC +
Preference number: 1 (lower is better)
Translates to: FWCAFIFHGHSISWV*CEFSCLLFDRDCKI
Trigger: GATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR CCA 90 bp ACCGAGCACTCTTCTGACATATTCTTACAACTGGAAATGCTTTGTTaGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGGCAACA +
Preference number: 1 (lower is better)
Translates to: TEHSSDIFLQLEMLC*SPCSLTFSRAIKAT
Trigger: TGTTGCCTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAGTTGTAAGAATATGTCAGAAGAGTGCTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 90 bp TACTCTTTGACAGAGATTGTAAAATCTGACCAAATTCCCCACCAGTaGCAAGGTTTAAGTCCACAAGCAACTGTTTGCACCAGAAGATCA +
Preference number: 1 (lower is better)
Translates to: YSLTEIVKSDQIPHQ*QGLSPQATVCTRRS
Trigger: TGATCTTCTGGTGCAAACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR GCA 90 bp CGGGGTGCTACTTTCATGACAGCATATGGTCAAGCTATAAAGGTGTaGATCGATCAGTCCTGTGAAAATAGAAGCTTAGTTATTAGCATG +
Preference number: 1 (lower is better)
Translates to: RGATFMTAYGQAIKV*IDQSCENRSLVISM
Trigger: CATGCTAATAACTAAGCTTCTATTTTCACAGGACTGATCGATGCACACCTTTATAGCTTGACCATATGCTGTCATGAAAGTAGCACCCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 90 bp TGTCTAACCACTTTAAAATTTGTCATGGTGGGGCTGGGAAATGTTTaGAGGCAAGCTGTACACTGGATTATTACTAAGGCTGTTTCAAGC +
Preference number: 1 (lower is better)
Translates to: CLTTLKFVMVGLGNV*RQAVHWIITKAVSS
Trigger: GCTTGAAACAGCCTTAGTAATAATCCAGTGTACAGCTTGCCTGCAAACATTTCCCAGCCCCACCATGACAAATTTTAAAGTGGTTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR TCA 90 bp TATAAGAAGTCCTTAAAGATGATGAAAAATGTGAAGCAACTCATGTaGGAAAGCTGTAAGTGGTCAGAGAAGCAAGCTGACTTTTGGATG +
Preference number: 1 (lower is better)
Translates to: YKKSLKMMKNVKQLM*ESCKWSEKQADFWM
Trigger: CATCCAAAAGTCAGCTTGCTTCTCTGACCACTTACAGCTTTCTCACATGAGTTGCTTCACATTTTTCATCATCTTTAAGGACTTCTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 90 bp CTGAAAGTAAAAAGCCAATACAAACAAGGACCCTTTCTTCTGGATTaGGTGAAACACAATCAACTCCCTTCATCACGTAAGCAAATTAAA +
Preference number: 1 (lower is better)
Translates to: LKVKSQYKQGPFLLD*VKHNQLPSSRKQIK
Trigger: TTTAATTTGCTTACGTGATGAAGGGAGTTGATTGTGTTTCACCCAATCCAGAAGAAAGGGTCCTTGTTTGTATTGGCTTTTTACTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR TCA 90 bp AATGAAACTATACTTTTGGATGTATGTGATCAACTCAACAGTTGTTaGCAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCAC +
Preference number: 1 (lower is better)
Translates to: NETILLDVCDQLNSC*QHNRTSETKPANRH
Trigger: GTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAAGTATAGTTTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
3UTR-3UTR GCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTGCCAGGCCCTCACACTaGACAGCTTACAGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: FPEASTEARPPWDSRGRGARPSH*TAYRAL
Trigger: CAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGC...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCGCCAGGCCCTCACACTaGACAGCTTACAGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCARPSH*TAYRAL
Trigger: CAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGC...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTCCTGACAATGGGTGGTaGTGTGCGTGGAGCTCCTAC +
Preference number: 2 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGPDNGW*CAWSSY
Trigger: GTAGGAGCTCCACGCACATCACCACCCATTGTCAGG...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTCCCCATAGTCTCCTCTaGCCTGCTGCCGTGTACCTG +
Preference number: 2 (lower is better)
Translates to: FPEASTEARPPWDSRGRGPHSLL*PAAVYL
Trigger: CAGGTACACGGCAGCAGGGCAGAGGAGACTATGGGG...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCGTGAGGGAGAGCACCTaGCAATGGGTGGTGATGTGC +
Preference number: 2 (lower is better)
Translates to: NARGTYREDDLQPSNGHVVREST*QWVVMC
Trigger: GCACATCACCACCCATTGTCAGGTGCTCTCCCTCAC...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGGGAGCTGGGGGCTACTaGCCCTACTGTGTAGGCGGT +
Preference number: 2 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRGAGGY*PYCVGG
Trigger: ACCGCCTACACAGTAGGGGCAGTAGCCCCCAGCTCC...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCGCAGGGGCAGGGGTTTaGAAGATAAAGGAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: NARGTYREDDLQPSNGHVAGAGV*KIKEGQ
Trigger: CTGACCCTCCTTTATCTTGCAAACCCCTGCCCCTGC...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCCTGAACATGGCTTCATaGGATGTCCTGTGGTGGGTC +
Preference number: 2 (lower is better)
Translates to: NARGTYREDDLQPSNGHVLNMAS*DVLWWV
Trigger: GACCCACCACAGGACATCTCATGAAGCCATGTTCAG...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACTGGGGTGGGGGCTGTaGGCTGGCAGCCTAGAGGAC +
Preference number: 2 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPLGWGL*AGSLED
Trigger: GTCCTCTAGGCTGCCAGCTCACAGCCCCCACCCCAG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGGAGCTGGGGGCTACTaGCCCTACTGTGTAGGCGGT +
Preference number: 2 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRGAGGY*PYCVGG
Trigger: ACCGCCTACACAGTAGGGGCAGTAGCCCCCAGCTCC...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTGGAGCTGGGGGCTACTaGCCCTACTGTGTAGGCGGT +
Preference number: 2 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFGAGGY*PYCVGG
Trigger: ACCGCCTACACAGTAGGGGCAGTAGCCCCCAGCTCC...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 90 bp GCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTaGCAAGATAAAGGAGGGTCAGCTAAGGACATGAAGCCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: ASTEARPPWDSRGRG*QDKGGSAKDMKPAE
Trigger: TTCTGCAGGCTTCATGTCCTTAGCTGACCCTCCTTTATCTTGCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCGTCAGAGAAGCAAGCTaGCTTTTGGATGAAGGGTAC +
Preference number: 2 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCVREAS*LLDEGY
Trigger: GTACCCTTCATCCAAAAGTCAGCTTGCTTCTCTGAC...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTCCTGCACATGGTCTCTaGAAGTGTTCAAATTGGTTG +
Preference number: 2 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGPAHGL*KCSNWL
Trigger: CAACCAATTTGAACACTTTCAGAGACCATGTGCAGG...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGCTGGGGTGGGGGCTGTaGGCTGGCAGCCTAGAGGAC +
Preference number: 2 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWLGWGL*AGSLED
Trigger: GTCCTCTAGGCTGCCAGCTCACAGCCCCCACCCCAG...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCAGCATCCACACACGGTaGCTTAGTAAAGCAAGCACC +
Preference number: 2 (lower is better)
Translates to: NARGTYREDDLQPSNGHVSIHTR*LSKAST
Trigger: GGTGCTTGCTTTACTAAGTCACCGTGTGTGGATGCT...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTCCCCATAGTCTCCTCTaGCCTGCTGCCGTGTACCTG +
Preference number: 2 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFPHSLL*PAAVYL
Trigger: CAGGTACACGGCAGCAGGGCAGAGGAGACTATGGGG...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCGAAAAGGCTATCAGATaGCGCCTGAACTTAAGGTGG +
Preference number: 2 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCEKAIR*RLNLRW
Trigger: CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTC...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCACACACACAGAATGGCTaGAGTAAGCAGGAACGGGAA +
Preference number: 2 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPHTQNG*SKQERE
Trigger: TTCCCGTTCCTGCTTACTGCAGCCATTCTGTGTGTG...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTACCCCATAGTCTCCTCTaGCCTGCTGCCGTGTACCTG +
Preference number: 2 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLPHSLL*PAAVYL
Trigger: CAGGTACACGGCAGCAGGGCAGAGGAGACTATGGGG...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGTAAGACTCAGAGGCTaGTCCAGGTGTGTCCGGGGA +
Preference number: 2 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRVRLRG*SRCVRG
Trigger: TCCCCGGACACACCTGGAGCAGCCTCTGAGTCTTAC...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGACTCTTTCAGAGCTTTaGGGTAGCAGGCAGCCAGCT +
Preference number: 2 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRTLSEL*GSRQPA
Trigger: AGCTGGCTGCCTGCTACCCCAAAGCTCTGAAAGAGT...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCGAAGCCCGTCCTCCCTaGGACAGCAGGGGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFEARPP*DSRGRG
Trigger: ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTC...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTaGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATA +
Preference number: 2 (lower is better)
Translates to: TCSPPMATSFHRGTC*EFWHRGLTEHSSDI
Trigger: TATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGATCTGGCTTACAGGGGTaGGGGAGAGCACCTGACAAT +
Preference number: 2 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRSGLQG*GRAPDN
Trigger: ATTGTCAGGTGCTCTCCCTCACCCCTGTAAGCCAGA...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTCTGGCTTACAGGGGTaGGGGAGAGCACCTGACAAT +
Preference number: 2 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFSGLQG*GRAPDN
Trigger: ATTGTCAGGTGCTCTCCCTCACCCCTGTAAGCCAGA...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCAGGAAATTCACTTATTaGACGATGCTTGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCRKFTY*TMLGRE
Trigger: TTCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCT...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTCTTTCTCTACATACATaGTTGGAGATACCCCAAACT +
Preference number: 2 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGLSLHT*LEIPQT
Trigger: AGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAG...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAACAGAGAGGACGACCTaGAGCCCTCCAATGGCCACG +
Preference number: 2 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPTERTT*SPPMAT
Trigger: CGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGT...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCAAGCAAGCTGACTTTTaGATGAAGGGTACAACACAG +
Preference number: 2 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCKQADF*MKGTTQ
Trigger: CTGTGTTGTACCCTTCATCCAAAAGTCAGCTTGCTT...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTCTTTTTGTAGAAATCTaGAGAGTTCTGCGTCTGAAT +
Preference number: 2 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGLFVEI*RVLRLN
Trigger: ATTCAGACGCAGAACTCTTCAGATTTCTACAAAAAG...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCCCTGACAATGGGTGGTaGTGTGCGTGGAGCTCCTAC +
Preference number: 2 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSPDNGW*CAWSSY
Trigger: GTAGGAGCTCCACGCACATCACCACCCATTGTCAGG...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAGTGAGGGAGAGCACCTaGCAATGGGTGGTGATGTGC +
Preference number: 2 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPVREST*QWVVMC
Trigger: GCACATCACCACCCATTGTCAGGTGCTCTCCCTCAC...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCACTTTGCTGCAGGTTTTaGACAAACTGTCTGGCTTAC +
Preference number: 2 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPLCCRF*TNCLAY
Trigger: GTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAG...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGGTCAGAGAAGCAAGCTaGCTTTTGGATGAAGGGTAC +
Preference number: 2 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRVREAS*LLDEGY
Trigger: GTACCCTTCATCCAAAAGTCAGCTTGCTTCTCTGAC...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCGCCAGGCCCTCACACTaGACAGCTTACAGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFARPSH*TAYRAL
Trigger: CAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGC...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp GACATGGGCCTACTGCCCCGGGCAGACGGACGTCTCTTTAAGGAAGAGTGGTTGTCTTTCGGCCAGGGCTaGAATATTTGGCCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: DMGLLPRADGRLFKEEWLSFGQG*NIWPFS
Trigger: AGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGA...CAACCACTCTTCCTTAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR CCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTGTAGTGATACCTAAATaGGTGGCACAAAATGAGTTC +
Preference number: 2 (lower is better)
Translates to: FPEASTEARPPWDSRGRGVVIPK*VAQNEF
Trigger: GAACTCATTTTGTGCCACCCATTTAGGTATCACTAC...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCGTGGGGGCTGTGAGCTaGCAGCCTAGAGGACACAGC +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFVGAVS*QPRGHS
Trigger: GCTGTGTCCTCTAGGCTGCCAGCTCACAGCCCCCAC...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCCCTGCAGCCCTCCAATaGCCACGTCATTCCACCGGG +
Preference number: 2 (lower is better)
Translates to: KQASFALGSATESLEKPCPAALQ*PRHSTG
Trigger: CCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGG...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCAGCATCCACACACGGTaGCTTAGTAAAGCAAGCACC +
Preference number: 2 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGSIHTR*LSKAST
Trigger: GGTGCTTGCTTTACTAAGTCACCGTGTGTGGATGCT...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTGGTCAGCTAAGGACATaGAGCCTGCAGAAAAGGCTA +
Preference number: 2 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFGQLRT*SLQKRL
Trigger: TAGCCTTTTCTGCAGGCTTCATGTCCTTAGCTGACC...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTTCACCACGTCCATTCTaGGCAGGGTCCTTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: SMELTSSHGCSTQHACFRSPRPF*AGSFPS
Trigger: AGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGA...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR GCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAGCAGGGGCAGGGGTTTaGAAGATAAAGGAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPAGAGV*KIKEGQ
Trigger: CTGACCCTCCTTTATCTTGCAAACCCCTGCCCCTGC...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCCTCTACATACATGCTTaGAGATACCCCAAACTTAGA +
Preference number: 2 (lower is better)
Translates to: NARGTYREDDLQPSNGHVLYIHA*RYPKLR
Trigger: TCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAG...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCGTGGGGGCTGTGAGCTaGCAGCCTAGAGGACACAGC +
Preference number: 2 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLVGAVS*QPRGHS
Trigger: GCTGTGTCCTCTAGGCTGCCAGCTCACAGCCCCCAC...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTACATAACACACAGGGTTaGCCGGCTCCATTACGGGTA +
Preference number: 2 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLHNTQG*PAPLRV
Trigger: TACCCGTAATGGAGCCGGCCAACCCTGTGTGTTATG...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTACATCCAACAGCAATGTaGCACTTAGGGCTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLHPTAM*HLGLWD
Trigger: GTCCCACAGCCCTAAGTGCCACATTGCTGTTGGATG...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 90 bp AACATGCTAATCTGCCTGGCACCACCCCATTTTAGAGACTGTCACTaGGAGGCCCTGAATGCTCCTTCCATTCCTCACATGCAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: NMLICLAPPHFRDCH*EALNAPSIPHMQAA
Trigger: AGCAGCCTGCATGTGAGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGACAGTCTCTAAAATGGGGTGGTGCCAGGCAGATTAGCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR TCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACTGAACATGGCTTCATaGGATGTCCTGTGGTGGGTC +
Preference number: 2 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPLNMAS*DVLWWV
Trigger: GACCCACCACAGGACATCTCATGAAGCCATGTTCAG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCCTGACAATGGGTGGTaGTGTGCGTGGAGCTCCTAC +
Preference number: 2 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVPDNGW*CAWSSY
Trigger: GTAGGAGCTCCACGCACATCACCACCCATTGTCAGG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCGTGAGGGAGAGCACCTaGCAATGGGTGGTGATGTGC +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFVREST*QWVVMC
Trigger: GCACATCACCACCCATTGTCAGGTGCTCTCCCTCAC...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGGGGTGCTACTTTCATaGCAGCATATGGTCAAGCTA +
Preference number: 2 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRGVLLS*QHMVKL
Trigger: TAGCTTGACCATATGCTGTCATGAAAGTAGCACCCC...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCGGGGTGCTACTTTCATaGCAGCATATGGTCAAGCTA +
Preference number: 2 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGGVLLS*QHMVKL
Trigger: TAGCTTGACCATATGCTGTCATGAAAGTAGCACCCC...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp CGTCTGGTGAGTGATCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTCTCAGGGTCCTTCCCTTCTaGTGCGCCTTCATCTTCCAT +
Preference number: 2 (lower is better)
Translates to: RLVSDHLSARAGIFGLSLRVLPF*CAFIFH
Trigger: ATGGAAGATGAAGGCGCACCAGAAGGGAAGGACCCT...GAGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCACCAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR CCA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTAGGGTCCTTCCCTTCTaGTGCGCCTTCATCTTCCAT +
Preference number: 2 (lower is better)
Translates to: SMELTSSHGCSTQHACFRRVLPF*CAFIFH
Trigger: ATGGAAGATGAAGGCGCACCAGAAGGGAAGGACCCT...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR CCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTGAAGCCCGTCCTCCCTaGGACAGCAGGGGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLEARPP*DSRGRG
Trigger: ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTC...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTaGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCACAGCTCCCG +
Preference number: 2 (lower is better)
Translates to: KLMGAIEDKNRRVLL*VLQLNHLRSRAQLP
Trigger: CGGGAGCTGTGCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CGTCTGGTGAGTGATCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTCTCAAGCTGGGTGTGGTGTaGGTTCAGCTGTCTACTCTT +
Preference number: 2 (lower is better)
Translates to: RLVSDHLSARAGIFGLSLKLGVV*VQLSTL
Trigger: AAGAGTAGACAGCTGAACTCACACCACACCCAGCTT...GAGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCACCAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR TCA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTGTCACTTGGAGGCCCTaGATGCTCCTTCCATTCCTC +
Preference number: 2 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLVTWRP*MLLPFL
Trigger: GAGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGAC...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR TCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGTGGAGCTCCTACCCTaGACATGGCTTCATGAGATG +
Preference number: 2 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWVELLP*TWLHEM
Trigger: CATCTCATGAAGCCATGTTCAGGGTAGGAGCTCCAC...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCTCTGGCTTACAGGGGTaGGGGAGAGCACCTGACAAT +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFSGLQG*GRAPDN
Trigger: ATTGTCAGGTGCTCTCCCTCACCCCTGTAAGCCAGA...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAAAGCTGACTTTTGGATaGAGGGTACAACACAGTGTC +
Preference number: 2 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRKLTFG*RVQHSV
Trigger: GACACTGTGTTGTACCCTTCATCCAAAAGTCAGCTT...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTTGGAGGCCCTGAATaGTCCTTCCATTCCTCACAT +
Preference number: 2 (lower is better)
Translates to: SMELTSSHGCSTQHACFRLGGPE*SFHSSH
Trigger: ATGTGAGGAATGGAAGGAGCATTCAGGGCCTCCAAG...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR GCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGACTAACTCAGATGACTaGGATACGATACATCTTTCC +
Preference number: 2 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRTNSDD*DTIHLS
Trigger: GGAAAGATGTATCGTATCGCAGTCATCTGAGTTAGT...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACACACACAGAATGGCTaGAGTAAGCAGGAACGGGAA +
Preference number: 2 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPHTQNG*SKQERE
Trigger: TTCCCGTTCCTGCTTACTGCAGCCATTCTGTGTGTG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGTCACTTGAGAAGCCGTaGACAGCTCCCGAGTTGTGC +
Preference number: 2 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLSLEKP*TAPELC
Trigger: GCACAACTCGGGAGCTGTGCACGGCTTCTCAAGTGA...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGATTATTGCACGATGCTTaGCAGGGAACAAATGACGCT +
Preference number: 2 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRLLHDA*QGTNDA
Trigger: AGCGTCATTTGTTCCCTGCCAAGCATCGTGCAATAA...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCTCTACATACATGCTTaGAGATACCCCAAACTTAGA +
Preference number: 2 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRLYIHA*RYPKLR
Trigger: TCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGCATCCAACAGCAATGTaGCACTTAGGGCTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWHPTAM*HLGLWD
Trigger: GTCCCACAGCCCTAAGTGCCACATTGCTGTTGGATG...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp GAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTGAGAGATTGTAAAATCTaGCCAAATTCCCCACCAGTG +
Preference number: 2 (lower is better)
Translates to: ELTSSHGCSTQHACFRLVRDCKI*PNSPPV
Trigger: CACTGGTGGGGAATTTGGTCAGATTTTACAATCTCT...CACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR TCA 90 bp ACCACTTTAAAATTTGTCATGGTGGGGCTGGGAAATGTTTGCAGGCAAGCTGTACTTCCGTCTGGTGAGTaGTCATCTTTCGGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: TTLKFVMVGLGNVCRQAVLPSGE*SSFGQG
Trigger: GCCCTGGCCGAAAGATGATCACTCACCAGACGGAAG...TACAGCTTGCCTGCAAACATTTCCCAGCCCCACCATGACAAATTTTAAAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR TCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCCTGAACATGGCTTCATaGGATGTCCTGTGGTGGGTC +
Preference number: 2 (lower is better)
Translates to: KQASFALGSATESLEKPCLNMAS*DVLWWV
Trigger: GACCCACCACAGGACATCTCATGAAGCCATGTTCAG...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCTGAACATGGCTTCATaGGATGTCCTGTGGTGGGTC +
Preference number: 2 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVLNMAS*DVLWWV
Trigger: GACCCACCACAGGACATCTCATGAAGCCATGTTCAG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGTGGAGCTCCTACCCTaGACATGGCTTCATGAGATG +
Preference number: 2 (lower is better)
Translates to: KQASFALGSATESLEKPCVELLP*TWLHEM
Trigger: CATCTCATGAAGCCATGTTCAGGGTAGGAGCTCCAC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp GTGAGTGATCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTCTCCTTTGGCTTGGAGGCCCTGAATaGTCCTTCCATTCCTCACAT +
Preference number: 2 (lower is better)
Translates to: VSDHLSARAGIFGLSLLWLGGPE*SFHSSH
Trigger: ATGTGAGGAATGGAAGGAGCATTCAGGGCCTCCAAG...CCAAAGGAGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR GCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCAGGAAATTCACTTATTaGACGATGCTTGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGRKFTY*TMLGRE
Trigger: TTCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCT...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTAAGCAAGCTGACTTTTaGATGAAGGGTACAACACAG +
Preference number: 2 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFKQADF*MKGTTQ
Trigger: CTGTGTTGTACCCTTCATCCAAAAGTCAGCTTGCTT...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGACTCTTTCAGAGCTTTaGGGTAGCAGGCAGCCAGCT +
Preference number: 2 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLTLSEL*GSRQPA
Trigger: AGCTGGCTGCCTGCTACCCCAAAGCTCTGAAAGAGT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAGAAAAGGCTATCAGATaGCGCCTGAACTTAAGGTGG +
Preference number: 2 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPEKAIR*RLNLRW
Trigger: CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTC...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACCACTTTAAAATTTGTCATGGTGGGGCTGGGAAATGTTTGCAGGCAAGCTGTAGTCACTTGGAGGCCCTaGATGCTCCTTCCATTCCTC +
Preference number: 2 (lower is better)
Translates to: TTLKFVMVGLGNVCRQAVVTWRP*MLLPFL
Trigger: GAGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGAC...TACAGCTTGCCTGCAAACATTTCCCAGCCCCACCATGACAAATTTTAAAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR TCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTATCTGGCTTACAGGGGTaGGGGAGAGCACCTGACAAT +
Preference number: 2 (lower is better)
Translates to: MLLTVKQNATKASTHGDLSGLQG*GRAPDN
Trigger: ATTGTCAGGTGCTCTCCCTCACCCCTGTAAGCCAGA...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp CTAGCCGGGCTGAAAGTAAAAAGCCAATACAAACAAGGACCCTTTCTTCTGGATTCACCACGTCCATTCTaGGCAGGGTCCTTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: LAGLKVKSQYKQGPFLLDSPRPF*AGSFPS
Trigger: AGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGA...ATCCAGAAGAAAGGGTCCTTGTTTGTATTGGCTTTTTACTTTCAGCCCGGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR GCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCCAAGCACCGTCGGGGTaGTACTTTCATGACAGCATA +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFQAPSG*YFHDSI
Trigger: TATGCTGTCATGAAAGTAGCACCCCGACGGTGCTTG...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp CGTCTGGTGAGTGATCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTCTCTCTATAAGCTGGGTGTaGTGTGAGTTCAGCTGTCTA +
Preference number: 2 (lower is better)
Translates to: RLVSDHLSARAGIFGLSLSISWV*CEFSCL
Trigger: TAGACAGCTGAACTCACACCACACCCAGCTTATAGA...GAGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCACCAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR CCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCATTATTGCACGATGCTTaGCAGGGAACAAATGACGCT +
Preference number: 2 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPLLHDA*QGTNDA
Trigger: AGCGTCATTTGTTCCCTGCCAAGCATCGTGCAATAA...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGTTTGAACAAACTGTCTaGCTTACAGGGGTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWFEQTV*LTGVRE
Trigger: CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAA...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGCATAACACACAGGGTTaGCCGGCTCCATTACGGGTA +
Preference number: 2 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKHNTQG*PAPLRV
Trigger: TACCCGTAATGGAGCCGGCCAACCCTGTGTGTTATG...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCATGGGACAGAACATATaGTTAAAAACAGGAGCGACA +
Preference number: 2 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGMGQNI*LKTGAT
Trigger: TGTCGCTCCTGTTTTTAACCATATGTTCTGTCCCAT...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCTGGCACTTAGGGCTGTaGGACAAACAAGTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: KQASFALGSATESLEKPCWHLGL*DKQVEE
Trigger: CTCTTCCACTTGTTTGTCCCACAGCCCTAAGTGCCA...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCCATCCAACAGCAATGTaGCACTTAGGGCTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLHPTAM*HLGLWD
Trigger: GTCCCACAGCCCTAAGTGCCACATTGCTGTTGGATG...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGACTTGTTTGGAGTTTTaGCACCGTGGGCTAACCGAG +
Preference number: 2 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLTCLEF*HRGLTE
Trigger: CTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 90 bp CATGTGCAAAAGGTGGCTGGAACAAATGTTCAGATAAGGTGCGATTaGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGG +
Preference number: 2 (lower is better)
Translates to: HVQKVAGTNVQIRCD*PTGAENSDTRSQMR
Trigger: CCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCACCTTATCTGAACATTTGTTCCAGCCACCTTTTGCACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 90 bp GACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTaGAGAAGCCGTGCACAGCTCCCGAGTTGTGCGTTTAGAATTCTG +
Preference number: 2 (lower is better)
Translates to: DKNRRVLLLVLQLNH*RSRAQLPSCAFRIL
Trigger: CAGAATTCTAAACGCACAACTCGGGAGCTGTGCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTTTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 90 bp ATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTaGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCACAG +
Preference number: 2 (lower is better)
Translates to: IGKLMGAIEDKNRRV*LLVLQLNHLRSRAQ
Trigger: CTGTGCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp GGTCCTTCCCTTCTGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTGGGTAGAGATTGTAAAATCTaGCCAAATTCCCCACCAGTG +
Preference number: 2 (lower is better)
Translates to: GPSLLVRLHLPWTFYKLGRDCKI*PNSPPV
Trigger: CACTGGTGGGGAATTTGGTCAGATTTTACAATCTCT...ACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR TCA 90 bp CTAGCCGGGCTGAAAGTAAAAAGCCAATACAAACAAGGACCCTTTCTTCTGGATCTTGCTTCCGTCTGGTaGGTGATCATCTTTCGGCCA +
Preference number: 2 (lower is better)
Translates to: LAGLKVKSQYKQGPFLLDLASVW*VIIFRP
Trigger: TGGCCGAAAGATGATCACTCACCAGACGGAAGCAAG...ATCCAGAAGAAAGGGTCCTTGTTTGTATTGGCTTTTTACTTTCAGCCCGGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR TCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGACTTTTTGTAGAAATCTaGAGAGTTCTGCGTCTGAAT +
Preference number: 2 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRLFVEI*RVLRLN
Trigger: ATTCAGACGCAGAACTCTTCAGATTTCTACAAAAAG...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCACTTTTGGATGTATGTaGTCAACTCAACAGTTGTTG +
Preference number: 2 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGTFGCM*STQQLL
Trigger: CAACAACTGTTGAGTTGATCACATACATCCAAAAGT...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGCTTTGCTGCAGGTTTTaGACAAACTGTCTGGCTTAC +
Preference number: 2 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWLCCRF*TNCLAY
Trigger: GTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAG...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCTCTGGCTTGTTAGACTaGTGCTTCTCTTTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFSGLLD*CFSLLQ
Trigger: CTGCAGCAAAGAGAAGCATCAGTCTAACAAGCCAGA...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp TCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGGGTCAGCCACAAGCAACTGTTTaGACCAGAAGATCATTACTT +
Preference number: 2 (lower is better)
Translates to: SSHAGCSMVLDGLELRGQPQATV*TRRSLL
Trigger: AAGTAATGATCTTCTGGTGCAAACAGTTGCTTGTGG...CTGACCCCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR GCA 90 bp AGAGTGGTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTTCCTCACATGCAGGCTaGTCCATGGTGCTGGATGGA +
Preference number: 2 (lower is better)
Translates to: RVVGSVCVLRTSLHLIYISSHAG*SMVLDG
Trigger: TCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGA...AATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAACCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR GCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCCACACACAGAATGGCTaGAGTAAGCAGGAACGGGAA +
Preference number: 2 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLHTQNG*SKQERE
Trigger: TTCCCGTTCCTGCTTACTGCAGCCATTCTGTGTGTG...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGGCCAGTTTCATAAAGTaGACCTCTGCCCTATCAGCT +
Preference number: 2 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLASFIK*TSALSA
Trigger: AGCTGATAGGGCAGAGGTGCACTTTATGAAACTGGC...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTACTCTACATACATGCTTaGAGATACCCCAAACTTAGA +
Preference number: 2 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLLYIHA*RYPKLR
Trigger: TCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAG...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGATTTCATGACAGCATATaGTCAAGCTATAAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRFHDSI*SSYKGV
Trigger: CACACCTTTATAGCTTGACCATATGCTGTCATGAAA...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGTGTGGGACAAACAAGTaGAAGAGTCTTTTGGAGACG +
Preference number: 2 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWCGTNK*KSLLET
Trigger: CGTCTCCAAAAGACTCTTCCACTTGTTTGTCCCACA...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGTCTGGCTTGTTAGACTaGTGCTTCTCTTTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKSGLLD*CFSLLQ
Trigger: CTGCAGCAAAGAGAAGCATCAGTCTAACAAGCCAGA...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAATCTGGCTTGTTAGACTaGTGCTTCTCTTTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: QNGCSKQEREELSHSEQESGLLD*CFSLLQ
Trigger: CTGCAGCAAAGAGAAGCATCAGTCTAACAAGCCAGA...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCAAGCTGACTTTTGGATaGAGGGTACAACACAGTGTC +
Preference number: 2 (lower is better)
Translates to: KQASFALGSATESLEKPCKLTFG*RVQHSV
Trigger: GACACTGTGTTGTACCCTTCATCCAAAAGTCAGCTT...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGAAGCTGACTTTTGGATaGAGGGTACAACACAGTGTC +
Preference number: 2 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLKLTFG*RVQHSV
Trigger: GACACTGTGTTGTACCCTTCATCCAAAAGTCAGCTT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGTGAAGCAACTCATGTaGGAAAGCTGTAAGTGGTCA +
Preference number: 2 (lower is better)
Translates to: KQASFALGSATESLEKPCVKQLM*ESCKWS
Trigger: TGACCACTTACAGCTTTCTCACATGAGTTGCTTCAC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGAGGTTTCTTGTCTCTTaGAAAATCAAAGCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWRFLVS*KIKAVA
Trigger: GGCCACAGCTTTGATTTTTCAAGAGACAAGAAACCT...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCCTTCACATGTGTGAATaGCTGCTATGGGACAGAACA +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFLHMCE*LLWDRT
Trigger: TGTTCTGTCCCATAGCAGTCATTCACACATGTGAAG...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCCCATGCTACTCACAGTaGAGCAAAATGCGACAAAAG +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFPCYSQ*SKMRQK
Trigger: CTTTTGTCGCATTTTGCTTCACTGTGAGTAGCATGG...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCCACAAGCAACTGTTTaGACCAGAAGATCATTACTT +
Preference number: 2 (lower is better)
Translates to: SMELTSSHGCSTQHACFRPQATV*TRRSLL
Trigger: AAGTAATGATCTTCTGGTGCAAACAGTTGCTTGTGG...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR GCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCCTTTCTCTACATACATaGTTGGAGATACCCCAAACT +
Preference number: 2 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSLSLHT*LEIPQT
Trigger: AGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAG...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCACTAACTCAGATGACTaGGATACGATACATCTTTCC +
Preference number: 2 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSTNSDD*DTIHLS
Trigger: GGAAAGATGTATCGTATCGCAGTCATCTGAGTTAGT...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGCAAGCTATAAAGGTGTaGATCGATCAGTCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWQAIKV*IDQSCE
Trigger: TTCACAGGACTGATCGATGCACACCTTTATAGCTTG...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTACAAGCACCGTCGGGGTaGTACTTTCATGACAGCATA +
Preference number: 2 (lower is better)
Translates to: MLLTVKQNATKASTHGDLQAPSG*YFHDSI
Trigger: TATGCTGTCATGAAAGTAGCACCCCGACGGTGCTTG...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTGCAGGGGCAGGGGTTTaGAAGATAAAGGAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLAGAGV*KIKEGQ
Trigger: CTGACCCTCCTTTATCTTGCAAACCCCTGCCCCTGC...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp TACTCTTTGGCATCTGGCATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGACATTCTATAAGCTaGGTGTGGTGTGAGTTCAGC +
Preference number: 2 (lower is better)
Translates to: YSLASGILNTIHHVHSAQGHSIS*VWCEFS
Trigger: GCTGAACTCACACCACACCCAGCTTATAGAATGTCC...CTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAATGCCAGATGCCAAAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR CCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCTTATTGCACGATGCTTaGCAGGGAACAAATGACGCT +
Preference number: 2 (lower is better)
Translates to: KQASFALGSATESLEKPCLLHDA*QGTNDA
Trigger: AGCGTCATTTGTTCCCTGCCAAGCATCGTGCAATAA...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGTTATTGCACGATGCTTaGCAGGGAACAAATGACGCT +
Preference number: 2 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLLLHDA*QGTNDA
Trigger: AGCGTCATTTGTTCCCTGCCAAGCATCGTGCAATAA...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTTGAACAAACTGTCTaGCTTACAGGGGTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLFEQTV*LTGVRE
Trigger: CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAA...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAATTTGAACAAACTGTCTaGCTTACAGGGGTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: QNGCSKQEREELSHSEQEFEQTV*LTGVRE
Trigger: CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAA...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCTGTGGGACAAACAAGTaGAAGAGTCTTTTGGAGACG +
Preference number: 2 (lower is better)
Translates to: KQASFALGSATESLEKPCCGTNK*KSLLET
Trigger: CGTCTCCAAAAGACTCTTCCACTTGTTTGTCCCACA...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCTCTGGCTTGTTAGACTaGTGCTTCTCTTTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: THEVMEEKLTQMTAIRYISGLLD*CFSLLQ
Trigger: CTGCAGCAAAGAGAAGCATCAGTCTAACAAGCCAGA...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGTCTTCTTCACATGTGTaGATGACTGCTATGGGACAG +
Preference number: 2 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKSSSHV*MTAMGQ
Trigger: CTGTCCCATAGCAGTCATTCACACATGTGAAGAAGA...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGAGGCAACTTGTACTTTaGTTCTTGTGTCTTCTTCAC +
Preference number: 2 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWRQLVL*FLCLLH
Trigger: GTGAAGAAGACACAAGAATCAAAGTACAAGTTGCCT...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGATGAAATGCTGTGTTTaGTCTTTGGGCCCAATTCAC +
Preference number: 2 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLMKCCV*SLGPIH
Trigger: GTGAATTGGGCCCAAAGATCAAACACAGCATTTCAT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp GACAGCAGACACCATGGAAGCAGCACAAAGATGACTAGGGTTGCTTTGCAAAGCCAGAAGTTCAGCTTGTaGAAAATCAGATCGCCTATT +
Preference number: 2 (lower is better)
Translates to: DSRHHGSSTKMTRVALQSQKFSL*KIRSPI
Trigger: AATAGGCGATCTGATTTTTCACAAGCTGAACTTCTG...GCTTTGCAAAGCAACCCTAGTCATCTTTGTGCTGCTTCCATGGTGTCTGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR GCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGACTAACTCAGATGACTaGGATACGATACATCTTTCC +
Preference number: 2 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWTNSDD*DTIHLS
Trigger: GGAAAGATGTATCGTATCGCAGTCATCTGAGTTAGT...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCCAAGCTATAAAGGTGTaGATCGATCAGTCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: KQASFALGSATESLEKPCQAIKV*IDQSCE
Trigger: TTCACAGGACTGATCGATGCACACCTTTATAGCTTG...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCCAAGCTATAAAGGTGTaGATCGATCAGTCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFQAIKV*IDQSCE
Trigger: TTCACAGGACTGATCGATGCACACCTTTATAGCTTG...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp CTAGCCGGGCTGAAAGTAAAAAGCCAATACAAACAAGGACCCTTTCTTCTGGATCTCCATGGTGCTGGATaGATTAGAGTTAAGGGGTCA +
Preference number: 2 (lower is better)
Translates to: LAGLKVKSQYKQGPFLLDLHGAG*IRVKGS
Trigger: TGACCCCTTAACTCTAATCCATCCAGCACCATGGAG...ATCCAGAAGAAAGGGTCCTTGTTTGTATTGGCTTTTTACTTTCAGCCCGGCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCAAGCAAGCTGACTTTTaGATGAAGGGTACAACACAG +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFKQADF*MKGTTQ
Trigger: CTGTGTTGTACCCTTCATCCAAAAGTCAGCTTGCTT...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTCATAACACACAGGGTTaGCCGGCTCCATTACGGGTA +
Preference number: 2 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLHNTQG*PAPLRV
Trigger: TACCCGTAATGGAGCCGGCCAACCCTGTGTGTTATG...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGATGGGACAGAACATATaGTTAAAAACAGGAGCGACA +
Preference number: 2 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWMGQNI*LKTGAT
Trigger: TGTCGCTCCTGTTTTTAACCATATGTTCTGTCCCAT...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGAACAGGGTAAAACACTaGGAAGAAATGAACCAATTC +
Preference number: 2 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWNRVKH*EEMNQF
Trigger: GAATTGGTTCATTTCTTCTCAGTGTTTTACCCTGTT...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCGTGAAGCAACTCATGTaGGAAAGCTGTAAGTGGTCA +
Preference number: 2 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIVKQLM*ESCKWS
Trigger: TGACCACTTACAGCTTTCTCACATGAGTTGCTTCAC...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTATCTTCTTCACATGTGTaGATGACTGCTATGGGACAG +
Preference number: 2 (lower is better)
Translates to: MLLTVKQNATKASTHGDLSSSHV*MTAMGQ
Trigger: CTGTCCCATAGCAGTCATTCACACATGTGAAGAAGA...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTCACACACAGAATGGCTaGAGTAAGCAGGAACGGGAA +
Preference number: 2 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLHTQNG*SKQERE
Trigger: TTCCCGTTCCTGCTTACTGCAGCCATTCTGTGTGTG...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp CGTCTGGTGAGTGATCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTCTCTTACTCTTTGGCATCTaGCATTTTAAACACCATTCA +
Preference number: 2 (lower is better)
Translates to: RLVSDHLSARAGIFGLSLLLFGI*HFKHHS
Trigger: TGAATGGTGTTTAAAATGCCAGATGCCAAAGAGTAA...GAGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCACCAGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCCTTTATCTCATTCCATaGAGCCTTCAAGATGACAAG +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFLYLIP*SLQDDK
Trigger: CTTGTCATCTTGAAGGCTCCATGGAATGAGATAAAG...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGGCACAAAATGAGTTCTaGCTTGTTAGACTGATGCTT +
Preference number: 2 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLAQNEF*LVRLML
Trigger: AAGCATCAGTCTAACAAGCCAGAACTCATTTTGTGC...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCGCACAAAATGAGTTCTaGCTTGTTAGACTGATGCTT +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFAQNEF*LVRLML
Trigger: AAGCATCAGTCTAACAAGCCAGAACTCATTTTGTGC...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCGTAGTGATACCTAAATaGGTGGCACAAAATGAGTTC +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFVVIPK*VAQNEF
Trigger: GAACTCATTTTGTGCCACCCATTTAGGTATCACTAC...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCATGGGACAGAACATATaGTTAAAAACAGGAGCGACA +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFMGQNI*LKTGAT
Trigger: TGTCGCTCCTGTTTTTAACCATATGTTCTGTCCCAT...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 90 bp GACAGCAGACACCATGGAAGCAGCACAAAGATGACTAGGGTTGCTTaGCAAAGCAAGAAAGACAGAAGTTCAGCTTGTGAAAAATCAGAT +
Preference number: 2 (lower is better)
Translates to: DSRHHGSSTKMTRVA*QSKKDRSSACEKSD
Trigger: ATCTGATTTTTCACAAGCTGAACTTCTGTCTTTCTTGCTTTGCAAAGCAACCCTAGTCATCTTTGTGCTGCTTCCATGGTGTCTGCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR TCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCACTTTTGGATGTATGTaGTCAACTCAACAGTTGTTG +
Preference number: 2 (lower is better)
Translates to: KQASFALGSATESLEKPCTFGCM*STQQLL
Trigger: CAACAACTGTTGAGTTGATCACATACATCCAAAAGT...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCACTTTTGGATGTATGTaGTCAACTCAACAGTTGTTG +
Preference number: 2 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFTFGCM*STQQLL
Trigger: CAACAACTGTTGAGTTGATCACATACATCCAAAAGT...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAACAGGGTAAAACACTaGGAAGAAATGAACCAATTC +
Preference number: 2 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVNRVKH*EEMNQF
Trigger: GAATTGGTTCATTTCTTCTCAGTGTTTTACCCTGTT...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAAGGAAATTCACTTATTaGACGATGCTTGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: MLLTVKQNATKASTHGDLRKFTY*TMLGRE
Trigger: TTCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCT...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTACAAGCTATAAAGGTGTaGATCGATCAGTCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: MLLTVKQNATKASTHGDLQAIKV*IDQSCE
Trigger: TTCACAGGACTGATCGATGCACACCTTTATAGCTTG...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGCAAATAAGAACTATTTaGATTCCAAGGCAGATGACG +
Preference number: 2 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLQIRTI*IPRQMT
Trigger: CGTCATCTGCCTTGGAATGCAAATAGTTCTTATTTG...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAAGTAGTGATACCTAAATaGGTGGCACAAAATGAGTTC +
Preference number: 2 (lower is better)
Translates to: QNGCSKQEREELSHSEQEVVIPK*VAQNEF
Trigger: GAACTCATTTTGTGCCACCCATTTAGGTATCACTAC...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAAAGCAAGCTGACTTTTaGATGAAGGGTACAACACAG +
Preference number: 2 (lower is better)
Translates to: MLLTVKQNATKASTHGDLKQADF*MKGTTQ
Trigger: CTGTGTTGTACCCTTCATCCAAAAGTCAGCTTGCTT...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCTTTCATGACAGCATATaGTCAAGCTATAAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: KQASFALGSATESLEKPCFHDSI*SSYKGV
Trigger: CACACCTTTATAGCTTGACCATATGCTGTCATGAAA...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 90 bp CCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTaGCACCAGAAGATCATTACTTTTTCAGTAGCAAACCCATTCAAT +
Preference number: 2 (lower is better)
Translates to: PNSPPVPRFKSTSNC*HQKIITFSVANPFN
Trigger: ATTGAATGGGTTTGCTACTGAAAAAGTAATGATCTTCTGGTGCAAACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR CAA 90 bp GACATATTCTTACAACTGGAAATGCTTTGTTGGTCCCCATGTTCCTaGACTTTCTCTAGGGCCATAAAGGCAACATCTTCTATTGCAGGT +
Preference number: 2 (lower is better)
Translates to: DIFLQLEMLCWSPCS*TFSRAIKATSSIAG
Trigger: ACCTGCAATAGAAGATGTTGCCTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAGTTGTAAGAATATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAACTTTTTGTAGAAATCTaGAGAGTTCTGCGTCTGAAT +
Preference number: 2 (lower is better)
Translates to: QNGCSKQEREELSHSEQELFVEI*RVLRLN
Trigger: ATTCAGACGCAGAACTCTTCAGATTTCTACAAAAAG...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTCCTGCACATGGTCTCTaGAAGTGTTCAAATTGGTTG +
Preference number: 2 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLPAHGL*KCSNWL
Trigger: CAACCAATTTGAACACTTTCAGAGACCATGTGCAGG...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCGTGCGTTTAGAATTCTaGTTACATGAAATGCTGTGT +
Preference number: 2 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLVRLEF*LHEMLC
Trigger: ACACAGCATTTCATGTAATCAGAATTCTAAACGCAC...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp CTAGCCGGGCTGAAAGTAAAAAGCCAATACAAACAAGGACCCTTTCTTCTGGATTTTTCAAATGAGCCCTaGGCAATTTGTAAAGGCCAA +
Preference number: 2 (lower is better)
Translates to: LAGLKVKSQYKQGPFLLDFSNEP*AICKGQ
Trigger: TTGGCCTTTACAAATTGCTCAGGGCTCATTTGAAAA...ATCCAGAAGAAAGGGTCCTTGTTTGTATTGGCTTTTTACTTTCAGCCCGGCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR CCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCCTCTACATACATGCTTaGAGATACCCCAAACTTAGA +
Preference number: 2 (lower is better)
Translates to: THEVMEEKLTQMTAIRYILYIHA*RYPKLR
Trigger: TCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAG...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCCTTTATCTCATTCCATaGAGCCTTCAAGATGACAAG +
Preference number: 2 (lower is better)
Translates to: THEVMEEKLTQMTAIRYILYLIP*SLQDDK
Trigger: CTTGTCATCTTGAAGGCTCCATGGAATGAGATAAAG...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR TCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTACTTTTTGTAGAAATCTaGAGAGTTCTGCGTCTGAAT +
Preference number: 2 (lower is better)
Translates to: MLLTVKQNATKASTHGDLLFVEI*RVLRLN
Trigger: ATTCAGACGCAGAACTCTTCAGATTTCTACAAAAAG...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CCA 90 bp GTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTGGTTGTAGGCAAGCTGTACACTaGATTATTACTAAGGCTGTT +
Preference number: 2 (lower is better)
Translates to: VGSVCVLRTSLHLIYIGCRQAVH*IITKAV
Trigger: AACAGCCTTAGTAATAATCCAGTGTACAGCTTGCCT...ACAACCAATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR CCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTATGGGACAGAACATATaGTTAAAAACAGGAGCGACA +
Preference number: 2 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLMGQNI*LKTGAT
Trigger: TGTCGCTCCTGTTTTTAACCATATGTTCTGTCCCAT...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 72 bp GGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTaGTCCAGGTGTGTCCGGGGAAGCCAGGCCCTCACA +
Preference number: 3 (lower is better)
Translates to: GWPAPLRVRLRG*SRCVRGSQALT
Trigger: TGTGAGGGCCTGGCTTCCCCGGACACACCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 72 bp CACAGCTTACAGGGCCCTGGGGTGGGGGCTGTGAGCTaGCAGCCTAGAGGACACAGCTCACCTGCACATGGT +
Preference number: 3 (lower is better)
Translates to: HSLQGPGVGAVS*QPRGHSSPAHG
Trigger: ACCATGTGCAGGTGAGCTGTGTCCTCTAGGCTGCCAGCTCACAGCCCCCACCCCAGGGCCCTGTAAGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 72 bp CTCCCCATAGTCTCCTCTGCCCTGCTGCCGTGTACCTaGCTCCCTTCACTCATCCACATCACCGGCCCTAGG +
Preference number: 3 (lower is better)
Translates to: LPIVSSALLPCT*LPSLIHITGPR
Trigger: CCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGTACACGGCAGCAGGGCAGAGGAGACTATGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 72 bp AAGGAAATGCGCGGGGCACATACAGAGAGGACGACCTaGAGCCCTCCAATGGCCACGTCATTCCACCGGGGA +
Preference number: 3 (lower is better)
Translates to: KEMRGAHTERTT*SPPMATSFHRG
Trigger: TCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 72 bp CAAACTGTCTGGCTTACAGGGGTGAGGGAGAGCACCTaGCAATGGGTGGTGATGTGCGTGGAGCTCCTACCC +
Preference number: 3 (lower is better)
Translates to: QTVWLTGVREST*QWVVMCVELLP
Trigger: GGGTAGGAGCTCCACGCACATCACCACCCATTGTCAGGTGCTCTCCCTCACCCCTGTAAGCCAGACAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 72 bp GACCTGATCCGGTCTCGTACATGGACATGGGCCTACTaGCCCGGGCAGACGGACGTCTCTTTAAGGAAGAGT +
Preference number: 3 (lower is better)
Translates to: DLIRSRTWTWAY*PGQTDVSLRKS
Trigger: ACTCTTCCTTAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGACCGGATCAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR CCA 72 bp GGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATaGCCACGTCATTCCACCGGGGAACTTGTTTGGAGT +
Preference number: 3 (lower is better)
Translates to: GHIQRGRPAALQ*PRHSTGELVWS
Trigger: ACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CAA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCACTGGAAATGCTTTGTaGGTCCCCATGTTCCTTGAC +
Preference number: 3 (lower is better)
Translates to: NARGTYREDDLQPSNGHVTGNAL*VPMFLD
Trigger: GTCAAGGAACATGGGGACCAACAAAGCATTTCCAGT...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 72 bp AACTCTGACACCAGATCTCAGATGAGGCCAAGGAAATaGGCGGGGCACATACAGAGAGGACGACCTGCAGCC +
Preference number: 3 (lower is better)
Translates to: NSDTRSQMRPRK*AGHIQRGRPAA
Trigger: GGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATTTCCTTGGCCTCATCTGAGATCTGGTGTCAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 72 bp ATGGTTTCTGACCTGATCCGGTCTCGTACATGGACATaGGCCTACTGCCCCGGGCAGACGGACGTCTCTTTA +
Preference number: 3 (lower is better)
Translates to: MVSDLIRSRTWT*AYCPGQTDVSL
Trigger: TAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGACCGGATCAGGTCAGAAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR CAA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCTCAACTCAACAGTTGTaGACAACACAACCGAACATC +
Preference number: 3 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCSTQQL*TTQPNI
Trigger: GATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGA...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 72 bp ATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTGAGTaGTCATCTTTCGGCCAGGGCTGGAATATTTGGCCT +
Preference number: 3 (lower is better)
Translates to: MLHAARLLPSGE*SSFGQGWNIWP
Trigger: AGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCACCAGACGGAAGCAAGCGTGCTGCGTGGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR GCA 72 bp TTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTaGTTCCGTCTGGTGAGTGATCATCTTTCGGCCAGG +
Preference number: 3 (lower is better)
Translates to: LTSSHGCSTQHA*FRLVSDHLSAR
Trigger: CCTGGCCGAAAGATGATCACTCACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR CAA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCAGGAAATTCACTTATaGCACGATGCTTGGCAGGGA +
Preference number: 3 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRQEIHL*HDAWQG
Trigger: TCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCTG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 72 bp ATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTaGGTGATCATCTTTCGGCCAGGGCTGGAATATTTG +
Preference number: 3 (lower is better)
Translates to: MDAPRSTLASVW*VIIFRPGLEYL
Trigger: CAAATATTCCAGCCCTGGCCGAAAGATGATCACTCACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR TCA 72 bp CAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATaGGGCCAAGGAAATGCGCGGGGCACATACAGAGAG +
Preference number: 3 (lower is better)
Translates to: QQEQRTLTPDLR*GQGNARGTYRE
Trigger: CTCTCTGTATGTGCCCCGCGCATTTCCTTGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 72 bp ACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTaGGCCTTCATCTTCCATGGACATTCTATAAGCTGG +
Preference number: 3 (lower is better)
Translates to: TTSILRRVLPFW*AFIFHGHSISW
Trigger: CCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR GCA 72 bp GGCCCTGAATGCTCCTTCCATTCCTCACATGCAGGCTaGTCCATGGTGCTGGATGGATTAGAGTTAAGGGGT +
Preference number: 3 (lower is better)
Translates to: GPECSFHSSHAG*SMVLDGLELRG
Trigger: ACCCCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGAATGGAAGGAGCATTCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR CCA 72 bp GCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTaGCACCGTGGGCTAACCGAGCACTCTTCTGACATA +
Preference number: 3 (lower is better)
Translates to: ATSFHRGTCLEF*HRGLTEHSSDI
Trigger: TATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 72 bp CTGCCCCGGGCAGACGGACGTCTCTTTAAGGAAGAGTaGTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGC +
Preference number: 3 (lower is better)
Translates to: LPRADGRLFKEE*LEVSVYSEPVC
Trigger: GCAAACTGGTTCTGAGTACACAGACACTTCCAACCACTCTTCCTTAAAGAGACGTCCGTCTGCCCGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR CCA 72 bp TTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTaGTGCGCCTTCATCTTCCATGGACATTCTATAAGC +
Preference number: 3 (lower is better)
Translates to: FTTSILRRVLPF*CAFIFHGHSIS
Trigger: GCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR CCA 72 bp CCATTCCTCACATGCAGGCTGCTCCATGGTGCTGGATaGATTAGAGTTAAGGGGTCAGCAGGGAATCGTGTT +
Preference number: 3 (lower is better)
Translates to: PFLTCRLLHGAG*IRVKGSAGNRV
Trigger: AACACGATTCCCTGCTGACCCCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR CCA 72 bp CGGGAGCATCCAACAGCAATGTGGCACTTAGGGCTGTaGGACAAACAAGTGGAAGAGTCTTTTGGAGACGTG +
Preference number: 3 (lower is better)
Translates to: REHPTAMWHLGL*DKQVEESFGDV
Trigger: CACGTCTCCAAAAGACTCTTCCACTTGTTTGTCCCACAGCCCTAAGTGCCACATTGCTGTTGGATGCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CAA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTAAGTGGAAGAGTCTTTaGGAGACGTGGACCCTTTTC +
Preference number: 3 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFKWKSL*ETWTLF
Trigger: GAAAAGGGTCCACGTCTCCAAAAGACTCTTCCACTT...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CAA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTACTGGAAATGCTTTGTaGGTCCCCATGTTCCTTGAC +
Preference number: 3 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFTGNAL*VPMFLD
Trigger: GTCAAGGAACATGGGGACCAACAAAGCATTTCCAGT...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CAA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGCACCGGGGAACTTGTTaGGAGTTTTGGCACCGTGGG +
Preference number: 3 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLHRGTC*EFWHRG
Trigger: CCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTG...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 72 bp GATAAGGTGCGATTTGCCAACAGGAGCAGAGAACTCTaGCACCAGATCTCAGATGAGGCCAAGGAAATGCGC +
Preference number: 3 (lower is better)
Translates to: DKVRFANRSREL*HQISDEAKEMR
Trigger: GCGCATTTCCTTGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCACCTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 72 bp ATCTGGCATTTTAAACACCATTCACCACGTCCATTCTaGGCAGGGTCCTTCCCTTCTGGTGCGCCTTCATCT +
Preference number: 3 (lower is better)
Translates to: IWHFKHHSPRPF*AGSFPSGAPSS
Trigger: AGATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAATGCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR CAA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTCAACTCAACAGTTGTaGACAACACAACCGAACATC +
Preference number: 3 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFSTQQL*TTQPNI
Trigger: GATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGA...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CAA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCTCTTTGCTGCAGGTTTaGAACAAACTGTCTGGCTTA +
Preference number: 3 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGSLLQV*NKLSGL
Trigger: TAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGA...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 72 bp GATGTGCGTGGAGCTCCTACCCTGAACATGGCTTCATaGGATGTCCTGTGGTGGGTCAATGCTTTATCTCAT +
Preference number: 3 (lower is better)
Translates to: DVRGAPTLNMAS*DVLWWVNALSH
Trigger: ATGAGATAAAGCATTGACCCACCACAGGACATCTCATGAAGCCATGTTCAGGGTAGGAGCTCCACGCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 72 bp TTTCCTTCTGTTCAGTCAAGTGCCAGTTTCATAAAGTaGACCTCTGCCCTATCAGCTTTGGGGGAAGGGTGG +
Preference number: 3 (lower is better)
Translates to: FPSVQSSASFIK*TSALSALGEGW
Trigger: CCACCCTTCCCCCAAAGCTGATAGGGCAGAGGTGCACTTTATGAAACTGGCACTTGACTGAACAGAAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 72 bp CAAGCACCGTCGGGGTGCTACTTTCATGACAGCATATaGTCAAGCTATAAAGGTGTGCATCGATCAGTCCTG +
Preference number: 3 (lower is better)
Translates to: QAPSGCYFHDSI*SSYKGVHRSVL
Trigger: CAGGACTGATCGATGCACACCTTTATAGCTTGACCATATGCTGTCATGAAAGTAGCACCCCGACGGTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CAA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGCAGGAAATTCACTTATaGCACGATGCTTGGCAGGGA +
Preference number: 3 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWQEIHL*HDAWQG
Trigger: TCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCTG...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CAA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGTGGTCCCCATGTTCCTaGACTTTCTCTAGGGCCATA +
Preference number: 3 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLWSPCS*TFSRAI
Trigger: TATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCA...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CAA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCCTGCAACTGAATCACTaGAGAAGCCGTGCACAGCTC +
Preference number: 3 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLLQLNH*RSRAQL
Trigger: GAGCTGTGCACGGCTTCTCAAGTGATTCAGTTGCAG...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 72 bp GCCGTGCACAGCTCCCGAGTTGTGCGTTTAGAATTCTaGTTACATGAAATGCTGTGTTTGATCTTTGGGCCC +
Preference number: 3 (lower is better)
Translates to: AVHSSRVVRLEF*LHEMLCLIFGP
Trigger: GGGCCCAAAGATCAAACACAGCATTTCATGTAATCAGAATTCTAAACGCACAACTCGGGAGCTGTGCACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 72 bp TGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTaGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGAC +
Preference number: 3 (lower is better)
Translates to: WCAFIFHGHSIS*VWCEFSCLLFD
Trigger: GTCAAAGAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR CAA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCAGGAAATTCACTTATaGCACGATGCTTGGCAGGGA +
Preference number: 3 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVQEIHL*HDAWQG
Trigger: TCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCTG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CAA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGAAGTGGAAGAGTCTTTaGGAGACGTGGACCCTTTTC +
Preference number: 3 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLKWKSL*ETWTLF
Trigger: GAAAAGGGTCCACGTCTCCAAAAGACTCTTCCACTT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CAA 90 bp GTGAGTGATCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTCTCCTTTGGTCCACAAGCAACTGTTaGCACCAGAAGATCATTACT +
Preference number: 3 (lower is better)
Translates to: VSDHLSARAGIFGLSLLWSTSNC*HQKIIT
Trigger: AGTAATGATCTTCTGGTGCAAACAGTTGCTTGTGGA...CCAAAGGAGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR CAA 90 bp TCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGGGTCAGTCAGCTGTCTACTCTTaGACAGAGATTGTAAAATCT +
Preference number: 3 (lower is better)
Translates to: SSHAGCSMVLDGLELRGQSAVYS*TEIVKS
Trigger: AGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGA...CTGACCCCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR CAA 90 bp CTAGCCGGGCTGAAAGTAAAAAGCCAATACAAACAAGGACCCTTTCTTCTGGATTTTAGAGACTGTCACTaGGAGGCCCTGAATGCTCCT +
Preference number: 3 (lower is better)
Translates to: LAGLKVKSQYKQGPFLLDFRDCH*EALNAP
Trigger: AGGAGCATTCAGGGCCTCCAAGTGACAGTCTCTAAA...ATCCAGAAGAAAGGGTCCTTGTTTGTATTGGCTTTTTACTTTCAGCCCGGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR CAA 90 bp GTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTGGTTGTCCAGGGCTGGAATATTaGGCCTTTCTCTCCTTTGGC +
Preference number: 3 (lower is better)
Translates to: VGSVCVLRTSLHLIYIGCPGLEY*AFLSFG
Trigger: GCCAAAGGAGAGAAAGGCCAAATATTCCAGCCCTGG...ACAACCAATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR CAA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGAGGCAACATCTTCTATaGCAGGTCCTCAAACATTCC +
Preference number: 3 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLRQHLL*QVLKHS
Trigger: GGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR-3UTR CAA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCAGGCAACATCTTCTATaGCAGGTCCTCAAACATTCC +
Preference number: 3 (lower is better)
Translates to: KQASFALGSATESLEKPCRQHLL*QVLKHS
Trigger: GGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCT...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 72 bp TCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTaGTTCACCTCCTGCAGACAGCTCATTTCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: SIAGPQTFQGKH*FTSCRQLISQK
Trigger: CTTCTGGGAAATGAGCTGTCTGCAGGAGGTGAAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 72 bp GAAAGCTGTAAGTGGTCAGAGAAGCAAGCTGACTTTTaGATGAAGGGTACAACACAGTGTCAGGGAGTAGGT +
Preference number: 3 (lower is better)
Translates to: ESCKWSEKQADF*MKGTTQCQGVG
Trigger: ACCTACTCCCTGACACTGTGTTGTACCCTTCATCCAAAAGTCAGCTTGCTTCTCTGACCACTTACAGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 72 bp GTGGGGCTGGGAAATGTTTGCAGGCAAGCTGTACACTaGATTATTACTAAGGCTGTTTCAAGCAAGAGTTCG +
Preference number: 3 (lower is better)
Translates to: VGLGNVCRQAVH*IITKAVSSKSS
Trigger: CGAACTCTTGCTTGAAACAGCCTTAGTAATAATCCAGTGTACAGCTTGCCTGCAAACATTTCCCAGCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR TCA 72 bp CACGAAGAAAACTGGAAACCTATTGATCTATGGAATTaGCATCTTCGCATGGATGCTCCACGCAGCACGCTT +
Preference number: 3 (lower is better)
Translates to: HEENWKPIDLWN*HLRMDAPRSTL
Trigger: AAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAATAGGTTTCCAGTTTTCTTCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR TCA 72 bp TTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTaGTATACATTGGTTGTGGCCTGTTTCCTGAGGTTC +
Preference number: 3 (lower is better)
Translates to: LEVSVYSEPVCT*YTLVVACFLRF
Trigger: GAACCTCAGGAAACAGGCCACAACCAATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR GCA 72 bp ACACACGGTGACTTAGTAAAGCAAGCACCGTCGGGGTaGTACTTTCATGACAGCATATGGTCAAGCTATAAA +
Preference number: 3 (lower is better)
Translates to: THGDLVKQAPSG*YFHDSIWSSYK
Trigger: TTTATAGCTTGACCATATGCTGTCATGAAAGTAGCACCCCGACGGTGCTTGCTTTACTAAGTCACCGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 72 bp GCCTTCATCTTCCATGGACATTCTATAAGCTGGGTGTaGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGAT +
Preference number: 3 (lower is better)
Translates to: AFIFHGHSISWV*CEFSCLLFDRD
Trigger: ATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGATGAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR-3UTR CAA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTCAACTCAACAGTTGTaGACAACACAACCGAACATC +
Preference number: 3 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLSTQQL*TTQPNI
Trigger: GATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGA...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 72 bp GCATATGGGGAGGAAGGGATCATTGAGAATACAGGGTaGAAAAGAACGACGTTACTGAAGGTAGACATTGCT +
Preference number: 3 (lower is better)
Translates to: AYGEEGIIENTG*KRTTLLKVDIA
Trigger: AGCAATGTCTACCTTCAGTAACGTCGTTCTTTTTCACCCTGTATTCTCAATGATCCCTTCCTCCCCATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR GCA 72 bp ACAGAGATTGTAAAATCTGACCAAATTCCCCACCAGTaGCAAGGTTTAAGTCCACAAGCAACTGTTTGCACC +
Preference number: 3 (lower is better)
Translates to: TEIVKSDQIPHQ*QGLSPQATVCT
Trigger: GGTGCAAACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTTTACAATCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR TCA 72 bp TTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTaGCCAAATTCCCCACCAGTGCCAAGGTTTAAGTCC +
Preference number: 3 (lower is better)
Translates to: FSCLLFDRDCKI*PNSPPVPRFKS
Trigger: GGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
3UTR TCA 72 bp AATGGGTGGCACAAAATGAGTTCTGGCTTGTTAGACTaGTGCTTCTCTTTGCTGCAGGTTTTGAACAAACTG +
Preference number: 3 (lower is better)
Translates to: NGWHKMSSGLLD*CFSLLQVLNKL
Trigger: CAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAGTCTAACAAGCCAGAACTCATTTTGTGCCACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 72 bp TTGGATGAAGGGTACAACACAGTGTCAGGGAGTAGGTaGTTTCTTTTCCCTATAGTTCATGGTAGTGATACC +
Preference number: 3 (lower is better)
Translates to: LDEGYNTVSGSR*FLFPIVHGSDT
Trigger: GGTATCACTACCATGAACTATAGGGAAAAGAAATCACCTACTCCCTGACACTGTGTTGTACCCTTCATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 72 bp CAGCCTAGAGGACACAGCTCACCTGCACATGGTCTCTaGAAGTGTTCAAATTGGTTGCCAACATTTATAAAT +
Preference number: 3 (lower is better)
Translates to: QPRGHSSPAHGL*KCSNWLPTFIN
Trigger: ATTTATAAATGTTGGCAACCAATTTGAACACTTTCAGAGACCATGTGCAGGTGAGCTGTGTCCTCTAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 72 bp GCCAATACAAACAAGGACCCTTTCTTCTGGATTGGGTaGAACACAATCAACTCCCTTCATCACGTAAGCAAA +
Preference number: 3 (lower is better)
Translates to: ANTNKDPFFWIG*NTINSLHHVSK
Trigger: TTTGCTTACGTGATGAAGGGAGTTGATTGTGTTTCACCCAATCCAGAAGAAAGGGTCCTTGTTTGTATTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR TCA 72 bp TTTGCACCTGATATACATTGGTTGTGGCCTGTTTCCTaGGGTTCGAATTTTCACTCTGGAGTGTTTGAAGCT +
Preference number: 3 (lower is better)
Translates to: FAPDIHWLWPVS*GSNFHSGVFEA
Trigger: AGCTTCAAACACTCCAGAGTGAAAATTCGAACCTCAGGAAACAGGCCACAACCAATGTATATCAGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR CAA 90 bp ACCACTTTAAAATTTGTCATGGTGGGGCTGGGAAATGTTTGCAGGCAAGCTGTAGAATCGTGTTACTCTTaGGCATCTGGCATTTTAAAC +
Preference number: 3 (lower is better)
Translates to: TTLKFVMVGLGNVCRQAVESCYS*ASGILN
Trigger: GTTTAAAATGCCAGATGCCAAAGAGTAACACGATTC...TACAGCTTGCCTGCAAACATTTCCCAGCCCCACCATGACAAATTTTAAAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR-3UTR CAA 90 bp AGAGTGGTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTCTGAATGTGGAAAAGTaGTGGTTTGGACTTCCTCAA +
Preference number: 3 (lower is better)
Translates to: RVVGSVCVLRTSLHLIYILNVEK*WFGLPQ
Trigger: TTGAGGAAGTCCAAACCACAACTTTTCCACATTCAG...AATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAACCACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR GCA 72 bp ACTTTAAAATTTGTCATGGTGGGGCTGGGAAATGTTTaGAGGCAAGCTGTACACTGGATTATTACTAAGGCT +
Preference number: 3 (lower is better)
Translates to: TLKFVMVGLGNV*RQAVHWIITKA
Trigger: AGCCTTAGTAATAATCCAGTGTACAGCTTGCCTGCAAACATTTCCCAGCCCCACCATGACAAATTTTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR TCA 72 bp TGCTTTGCAAAGCAAGAAAGACAGAAGTTCAGCTTGTaGAAAATCAGATCGCCTATTGCTTTCCAAAAAGCC +
Preference number: 3 (lower is better)
Translates to: CFAKQERQKFSL*KIRSPIAFQKA
Trigger: GGCTTTTTGGAAAGCAATAGGCGATCTGATTTTTCACAAGCTGAACTTCTGTCTTTCTTGCTTTGCAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR GCA 72 bp ACTTTCATGACAGCATATGGTCAAGCTATAAAGGTGTaGATCGATCAGTCCTGTGAAAATAGAAGCTTAGTT +
Preference number: 3 (lower is better)
Translates to: TFMTAYGQAIKV*IDQSCENRSLV
Trigger: AACTAAGCTTCTATTTTCACAGGACTGATCGATGCACACCTTTATAGCTTGACCATATGCTGTCATGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CCA 72 bp AAGTACAGAATAATGAGTGACAGGGATCAAACACGTTaGAATAAAAGGCATCTCAGTTTTCCTATGCAGCAT +
Preference number: 3 (lower is better)
Translates to: KYRIMSDRDQTR*NKRHLSFPMQH
Trigger: ATGCTGCATAGGAAAACTGAGATGCCTTTTATTCCAACGTGTTTGATCCCTGTCACTCATTATTCTGTACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR TCA 72 bp ATACTTTTGGATGTATGTGATCAACTCAACAGTTGTTaGCAACACAACCGAACATCAGAAACTAAACCAGCA +
Preference number: 3 (lower is better)
Translates to: ILLDVCDQLNSC*QHNRTSETKPA
Trigger: TGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
3UTR TCA 72 bp TATATTAACATATCACGAAGAAAACTGGAAACCTATTaGTCTATGGAATTGACATCTTCGCATGGATGCTCC +
Preference number: 3 (lower is better)
Translates to: YINISRRKLETY*SMELTSSHGCS
Trigger: GGAGCATCCATGCGAAGATGTCAATTCCATAGATCAATAGGTTTCCAGTTTTCTTCGTGATATGTTAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCCTAACGGGTCCCAGCTaGGGCGGCGCTGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCLTGPS*GGADGG
Trigger: GCCGCCGTCAGCGCCGCCGCAGCTGGGACCCGTTAG...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354574.8
ENST00000355312.8
CDS-3UTR TCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTGCTGCGTGACCAGCTaGACGTCTGTGGGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGCCVTS*TSVGEP
Trigger: CGGCTCACCCACAGACGTTCAGCTGGTCACGCAGCA...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCACTCCCACCTCCCACCTaGGGGGAACTAGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPLPPPT*GELEAG
Trigger: CCCGGCCTCTAGTTCCCCGCAGGTGGGAGGTGGGAG...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCCGTGGCAAGCCAGACTaGATCCGTCTCTCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCRGKPD*IRLSPV
Trigger: GACAGGCGAGAGACGGATGCAGTCTGGCTTGCCACG...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTGGCCACATGGGGTTCTaGTGTGTCTGGTACCAAGCC +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGGHMGF*CVWYQA
Trigger: GGCTTGGTACCAGACACAGCAGAACCCCATGTGGCC...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTGAGGAGGCGGTGCCCTaGCCTTGTCAGTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGEEAVP*PCQLLF
Trigger: GAACAACAACTGACAAGGGCAGGGCACCGCCTCCTC...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCTCTCGTACATGGACATaGGCCTACTGCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCSRTWT*AYCPGQ
Trigger: CTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGA...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCTGCGCGGGGAAGGGCTaGAGTCTCATCCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCCAGKG*SLILLS
Trigger: AGAGAGCAGGATGAGACTCCAGCCCTTCCCCGCGCA...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCGTGAGGGAGAGCACCTaGCAATGGGTGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCVREST*QWVVMC
Trigger: GCACATCACCACCCATTGTCAGGTGCTCTCCCTCAC...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTTCTGGCTTACAGGGGTaGGGGAGAGCACCTGACAAT +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGSGLQG*GRAPDN
Trigger: ATTGTCAGGTGCTCTCCCTCACCCCTGTAAGCCAGA...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTAACCCGAGAGAGAACTaGCCTGCTGTCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGNPREN*PAVSSW
Trigger: CCAAGAGGAGACAGCAGGGCAGTTCTCTCTCGGGTT...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTGAGGAGGCGGTGCCCTaGCCTTGTCAGTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGEEAVP*PCQLLF
Trigger: GAACAACAACTGACAAGGGCAGGGCACCGCCTCCTC...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCAGCCAGGCCCTCACACTaGACAGCTTACAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPARPSH*TAYRAL
Trigger: CAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGC...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCACAGAGAGGACGACCTaGAGCCCTCCAATGGCCACG +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVTERTT*SPPMAT
Trigger: CGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGT...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTTCACTTGAGAAGCCGTaGACAGCTCCCGAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGSLEKP*TAPELC
Trigger: GCACAACTCGGGAGCTGTGCACGGCTTCTCAAGTGA...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCTCCCCTCAGCGCCTTaGAGCCTTGGCACAGCACGC +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRLPSAP*SLGTAR
Trigger: GCGTGCTGTGCCAAGGCTGCAAGGCGCTGAGGGGAG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354574.8
CDS-3UTR CCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCCGCTCTGCCAGCTCATaGTGCCCTCCTTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVRSASS*CPPCLA
Trigger: TGCAAGGCAAGGAGGGCACCATGAGCTGGCAGAGCG...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCCAGCAAAGGCGGCGGTaGCGGCGGCGCTTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGQQRRR*RRRFRS
Trigger: AGAGCGGAAGCGCCGCCGCCACCGCCGCCTTTGCTG...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
CDS-3UTR CCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCTCTCGTACATGGACATaGGCCTACTGCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVSRTWT*AYCPGQ
Trigger: CTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGA...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTCTGCCCTATCAGCTTTaGGGGAAGGGTGGCATATGG +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGLPYQL*GKGGIW
Trigger: CCATATGCCACCCTTCCCCCAAAGCTGATAGGGCAG...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCTCTGGCTTACAGGGGTaGGGGAGAGCACCTGACAAT +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCSGLQG*GRAPDN
Trigger: ATTGTCAGGTGCTCTCCCTCACCCCTGTAAGCCAGA...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCCTGGGGTGGGGGCTGTaGGCTGGCAGCCTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGLGWGL*AGSLED
Trigger: GTCCTCTAGGCTGCCAGCTCACAGCCCCCACCCCAG...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTACACCAGATCTCAGATaGGGCCAAGGAAATGCGCGG +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGTPDLR*GQGNAR
Trigger: CCGCGCATTTCCTTGGCCTCATCTGAGATCTGGTGT...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTGCTCCCACCTCCCACCTaGGGGGAACTAGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ELTSSHGCSTQHACFRLVLPPPT*GELEAG
Trigger: CCCGGCCTCTAGTTCCCCGCAGGTGGGAGGTGGGAG...CACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGACTCCCACCTCCCACCTaGGGGGAACTAGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRLPPPT*GELEAG
Trigger: CCCGGCCTCTAGTTCCCCGCAGGTGGGAGGTGGGAG...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCGCCTTCATAAGGATCCGGCCCGCTaGAGTCAGCGCACACCTCGC +
Preference number: 4 (lower is better)
Translates to: TIHHVHSAQGPSLLVRLHKDPAR*SQRTPR
Trigger: GCGAGGTGTGCGCTGACTGCAGCGGGCCGGATCCTT...ATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGTTCCACGAGGCGCTCTaGCAGCTCATGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRFHEAL*QLMVPS
Trigger: GGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGAA...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGSHSQV*CSASPA
Trigger: GGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACT...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTCGGCTTGACCCCATaGCATCTGGCTCCATGTCGT +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGFGLTP*HLAPCR
Trigger: ACGACATGGAGCCAGATGGCATGGGGTCAAGCCGAA...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTGCAGGGGCAGGGGTTTaGAAGATAAAGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGAGAGV*KIKEGQ
Trigger: CTGACCCTCCTTTATCTTGCAAACCCCTGCCCCTGC...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCGCAGGGGCAGGGGTTTaGAAGATAAAGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCAGAGV*KIKEGQ
Trigger: CTGACCCTCCTTTATCTTGCAAACCCCTGCCCCTGC...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCGTTACCAGGGCGCTGTaGTTTTGCGTGGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVVTRAL*FCVASQ
Trigger: CTGGCTTGCCACGCAAAACCACAGCGCCCTGGTAAC...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCATCCGGTCTCGTACATaGACATGGGCCTACTGCCCC +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVIRSRT*TWAYCP
Trigger: GGGGCAGTAGGCCCATGTCCATGTACGAGACCGGAT...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCAGTGAGGGAGAGCACCTaGCAATGGGTGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPVREST*QWVVMC
Trigger: GCACATCACCACCCATTGTCAGGTGCTCTCCCTCAC...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCGAGAGAGAACTGCCCTaGTGTCTCCTCTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVERELP*CLLLAS
Trigger: TGACGCCAAGAGGAGACAGCAGGGCAGTTCTCTCTC...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCATGAGGCCAAGGAAATaGGCGGGGCACATACAGAGA +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCMRPRK*AGHIQR
Trigger: TCTCTGTATGTGCCCCGCGCATTTCCTTGGCCTCAT...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCTCAGGTGTGCTGTTCTaGTTCTCCAGCCTGGATGCG +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVSGVLF*FSSLDA
Trigger: CGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGA...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTAGCGTGGCAAACTCATaGGCGTTGAACCGAGCTAAC +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGSVANS*ALNRAN
Trigger: GTTAGCTCGGTTCAACGCCCATGAGTTTGCCACGCT...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTGCTCGCTTCTCCCATTaGGAGATATGGTTTCTGACC +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGARFSH*EIWFLT
Trigger: GGTCAGAAACCATATCTCCCAATGGGAGAAGCGAGC...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCATGTCGTACGCACACTaGATGACCTGCTGCGTGACC +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVMSYAH*MTCCVT
Trigger: GGTCACGCAGCAGGTCATCCAGTGTGCGTACGACAT...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCACTCTTTCAGAGCTTTaGGGTAGCAGGCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCTLSEL*GSRQPA
Trigger: AGCTGGCTGCCTGCTACCCCAAAGCTCTGAAAGAGT...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCACGTTCCCCTATTTACTaGTGCCCAGGAAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPRSPIY*CPGRIR
Trigger: CCGGATCCTTCCTGGGCATCAGTAAATAGGGGAACG...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTCTCCACATTGTCTTTTaGACCCGAGAGAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGLHIVF*TRERTA
Trigger: GGCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAG...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGATGCTGCGTGACCAGCTaGACGTCTGTGGGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRCCVTS*TSVGEP
Trigger: CGGCTCACCCACAGACGTTCAGCTGGTCACGCAGCA...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTAGCATCCACACACGGTaGCTTAGTAAAGCAAGCACC +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGSIHTR*LSKAST
Trigger: GGTGCTTGCTTTACTAAGTCACCGTGTGTGGATGCT...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTGGTCAGCTAAGGACATaGAGCCTGCAGAAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGGQLRT*SLQKRL
Trigger: TAGCCTTTTCTGCAGGCTTCATGTCCTTAGCTGACC...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCCAGCGCACACCTCGCTaGTCCGGAGCCGTTTCGACA +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGQRTPR*SGAVST
Trigger: TGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTG...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAAAGGATCCGGCCCGCTaGAGTCAGCGCACACCTCGC +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLKDPAR*SQRTPR
Trigger: GCGAGGTGTGCGCTGACTGCAGCGGGCCGGATCCTT...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTTCCACGAGGCGCTCTaGCAGCTCATGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFFHEAL*QLMVPS
Trigger: GGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGAA...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCTAACGGGTCCCAGCTaGGGCGGCGCTGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVLTGPS*GGADGG
Trigger: GCCGCCGTCAGCGCCGCCGCAGCTGGGACCCGTTAG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354574.8
ENST00000355312.8
CDS-3UTR GCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCGCTGGAGTCTCATCCTaGTCTCTTCGGGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGAGVSS*SLRGGS
Trigger: CGAGCCGCCCCGAAGAGAGCAGGATGAGACTCCAGC...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCTGGAGTCTCATCCTaGTCTCTTCGGGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRAGVSS*SLRGGS
Trigger: CGAGCCGCCCCGAAGAGAGCAGGATGAGACTCCAGC...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTCACACCATACTTCTTTaGCGTCCCTTTCGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGHTILL*RPFRLD
Trigger: GTCAAGCCGAAAGGGACGGCAAAGAAGTATGGTGTG...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGGTAAGACTCAGAGGCTaGTCCAGGTGTGTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRVRLRG*SRCVRG
Trigger: TCCCCGGACACACCTGGAGCAGCCTCTGAGTCTTAC...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTGCCAGTTTCATAAAGTaGACCTCTGCCCTATCAGCT +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGASFIK*TSALSA
Trigger: AGCTGATAGGGCAGAGGTGCACTTTATGAAACTGGC...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTGGAGGCAACATGGAGTaGGGTGTTTCCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGGGNME*GVSFFR
Trigger: CCTGAAAAAGGAAACACCCCACTCCATGTTGCCTCC...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTAGAATCCTGTGTGCCTaGGTCTGCTCCATATACTGC +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGRILCA*VCSIYC
Trigger: GCAGTATATGGAGCAGACCCAGGCACACAGGATTCT...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGGTTACCAGGGCGCTGTaGTTTTGCGTGGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRVTRAL*FCVASQ
Trigger: CTGGCTTGCCACGCAAAACCACAGCGCCCTGGTAAC...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCTACCAAGCCATCCCCTaGCCACACCATACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCYQAIP*PHHTSL
Trigger: CAAAGAAGTATGGTGTGGCCAGGGGATGGCTTGGTA...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGGGGTTCTGCTGTGTCTaGTACCAAGCCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRGFCCV*YQAIPW
Trigger: CCAGGGGATGGCTTGGTACCAGACACAGCAGAACCC...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTGGCACTTAGGGCTGTaGGACAAACAAGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGWHLGL*DKQVEE
Trigger: CTCTTCCACTTGTTTGTCCCACAGCCCTAAGTGCCA...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCCATCCAACAGCAATGTaGCACTTAGGGCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVHPTAM*HLGLWD
Trigger: GTCCCACAGCCCTAAGTGCCACATTGCTGTTGGATG...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGACCTGCAGCCCTCCAATaGCCACGTCATTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRPAALQ*PRHSTG
Trigger: CCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGG...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCACTGCCCTATCAGCTTTaGGGGAAGGGTGGCATATGG +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPLPYQL*GKGGIW
Trigger: CCATATGCCACCCTTCCCCCAAAGCTGATAGGGCAG...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCAAAGGTCTCAACCATCTaGAGCAGTGTTGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPKVSTI*SSVGGH
Trigger: GTGGCCTCCAACACTGCTTCAGATGGTTGAGACCTT...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTTTGTGGCCTGTTTCCTaGGGTTCGAATTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGLWPVS*GSNFHS
Trigger: AGAGTGAAAATTCGAACCTCAGGAAACAGGCCACAA...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCGAACCAGTTTGCACCTaGTATACATTGGTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCEPVCT*YTLVVA
Trigger: GGCCACAACCAATGTATATCAGGTGCAAACTGGTTC...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTCTTTGCTGCAGGTTTTaGACAAACTGTCTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGLCCRF*TNCLAY
Trigger: GTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAG...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTTCTTCTTCACATGTGTaGATGACTGCTATGGGACAG +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGSSSHV*MTAMGQ
Trigger: CTGTCCCATAGCAGTCATTCACACATGTGAAGAAGA...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAAAGGATCCGGCCCGCTaGAGTCAGCGCACACCTCGC +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPKDPAR*SQRTPR
Trigger: GCGAGGTGTGCGCTGACTGCAGCGGGCCGGATCCTT...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGCTGGAGTCTCATCCTaGTCTCTTCGGGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLAGVSS*SLRGGS
Trigger: CGAGCCGCCCCGAAGAGAGCAGGATGAGACTCCAGC...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGCCAGGCCCTCACACTaGACAGCTTACAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLARPSH*TAYRAL
Trigger: CAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGC...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTACAGAGAGGACGACCTaGAGCCCTCCAATGGCCACG +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFTERTT*SPPMAT
Trigger: CGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGT...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGTCACTTGAGAAGCCGTaGACAGCTCCCGAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRSLEKP*TAPELC
Trigger: GCACAACTCGGGAGCTGTGCACGGCTTCTCAAGTGA...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCTCACTTGGGAGATATaGCGCCCTAGACTCCGATGG +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRLTWEI*RPRLRW
Trigger: CCATCGGAGTCTAGGGCGCCATATCTCCCAAGTGAG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCTCTCGTACATGGACATaGGCCTACTGCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGSRTWT*AYCPGQ
Trigger: CTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGA...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCGGGCTTGGGGCCACATaGGGTTCTGCTGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGGLGAT*GSAVSG
Trigger: ACCAGACACAGCAGAACCCCATGTGGCCCCAAGCCC...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAAGGGAGAGTGGGGCTTaGGGCCACATGGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLRESGA*GHMGFC
Trigger: GCAGAACCCCATGTGGCCCCAAGCCCCACTCTCCCT...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACCAGCTGAACGTCTGTaGGTGAGCCGGGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPPAERL*VSRGPL
Trigger: CAGGGGACCCCGGCTCACCCACAGACGTTCAGCTGG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTGAAAAGGCTATCAGATaGCGCCTGAACTTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGEKAIR*RLNLRW
Trigger: CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTC...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTCTGGAAATGCTTTGTTaGTCCCCATGTTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGLEMLC*SPCSLT
Trigger: AGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTATCTGCTTCTCCAGCCTaGATGCGTGCGCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLSASPA*MRARGR
Trigger: CCTTCCCCGCGCACGCATCCAGGCTGGAGAAGCAGA...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 72 bp GAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTaGCAAGATAAAGGAGGGTCAGCTAAGGACATGAAG +
Preference number: 4 (lower is better)
Translates to: EARPPWDSRGRG*QDKGGSAKDMK
Trigger: CTTCATGTCCTTAGCTGACCCTCCTTTATCTTGCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 72 bp CAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTaGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCA +
Preference number: 4 (lower is better)
Translates to: QPSNGHVIPPGN*FGVLAPWANRA
Trigger: TGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCACAAACTCATGGGCGTTaGACCGAGCTAACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPQTHGR*TELTSV
Trigger: GACAGAAGTTAGCTCGGTTCAACGCCCATGAGTTTG...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GACATGGGCCTACTGCCCCGGGCAGACGGACGTCTCTTTAAGGAAGAGTGGTTGCTTGCTTCCGTCTGGTaGGTGATCATCTTTCGGCCA +
Preference number: 4 (lower is better)
Translates to: DMGLLPRADGRLFKEEWLLASVW*VIIFRP
Trigger: TGGCCGAAAGATGATCACTCACCAGACGGAAGCAAG...CAACCACTCTTCCTTAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR TCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCTGAACATGGCTTCATaGGATGTCCTGTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRLNMAS*DVLWWV
Trigger: GACCCACCACAGGACATCTCATGAAGCCATGTTCAG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTGTGAGGGAGAGCACCTaGCAATGGGTGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFVREST*QWVVMC
Trigger: GCACATCACCACCCATTGTCAGGTGCTCTCCCTCAC...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCGTCAGAGAAGCAAGCTaGCTTTTGGATGAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVVREAS*LLDEGY
Trigger: GTACCCTTCATCCAAAAGTCAGCTTGCTTCTCTGAC...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTGTGAAGCAACTCATGTaGGAAAGCTGTAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGVKQLM*ESCKWS
Trigger: TGACCACTTACAGCTTTCTCACATGAGTTGCTTCAC...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTCCTGCACATGGTCTCTaGAAGTGTTCAAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGPAHGL*KCSNWL
Trigger: CAACCAATTTGAACACTTTCAGAGACCATGTGCAGG...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCTCTTCTTCACATGTGTaGATGACTGCTATGGGACAG +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCSSSHV*MTAMGQ
Trigger: CTGTCCCATAGCAGTCATTCACACATGTGAAGAAGA...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTATGAAATGCTGTGTTTaGTCTTTGGGCCCAATTCAC +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGMKCCV*SLGPIH
Trigger: GTGAATTGGGCCCAAAGATCAAACACAGCATTTCAT...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCAGCGCACACCTCGCTaGTCCGGAGCCGTTTCGACA +
Preference number: 4 (lower is better)
Translates to: SMELTSSHGCSTQHACFRQRTPR*SGAVST
Trigger: TGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTG...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTTTCCACGAGGCGCTCTaGCAGCTCATGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SMELTSSHGCSTQHACFRFHEAL*QLMVPS
Trigger: GGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGAA...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTGAGCTAACTTCTGTCTaGCCTGATTTCGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGELTSV*PDFVLM
Trigger: CATCAACACGAAATCAGGGCAGACAGAAGTTAGCTC...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCGCCTTCATGAGAGAGAACTGCCCTaGTGTCTCCTCTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: TIHHVHSAQGPSLLVRLHERELP*CLLLAS
Trigger: TGACGCCAAGAGGAGACAGCAGGGCAGTTCTCTCTC...ATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGTGGACATGGGCCTACTaGCCCGGGCAGACGGACGTC +
Preference number: 4 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVWTWAY*PGQTDV
Trigger: GACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTCCA...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR GCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCACACACCATACTTCTTTaGCGTCCCTTTCGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPHTILL*RPFRLD
Trigger: GTCAAGCCGAAAGGGACGGCAAAGAAGTATGGTGTG...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCGAGGAGGCGGTGCCCTaGCCTTGTCAGTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGEEAVP*PCQLLF
Trigger: GAACAACAACTGACAAGGGCAGGGCACCGCCTCCTC...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTCAAGCTATAAAGGTGTaGATCGATCAGTCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGQAIKV*IDQSCE
Trigger: TTCACAGGACTGATCGATGCACACCTTTATAGCTTG...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTGGCAACATCTTCTATTaGAGGTCCTCAAACATTCCA +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGGNIFY*RSSNIP
Trigger: TGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCC...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTGTTACCAGGGCGCTGTaGTTTTGCGTGGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFVTRAL*FCVASQ
Trigger: CTGGCTTGCCACGCAAAACCACAGCGCCCTGGTAAC...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCTTAGCTGCTGTATCTTaGCCTCAGAAGCCACTAGAG +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVLAAVS*PQKPLE
Trigger: CTCTAGTGGCTTCTGAGGCCAAGATACAGCAGCTAA...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR CCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAATCCGGTCTCGTACATaGACATGGGCCTACTGCCCC +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRIRSRT*TWAYCP
Trigger: GGGGCAGTAGGCCCATGTCCATGTACGAGACCGGAT...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCTGGCTCCATGTCGTTaGGAGTGTTGTCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRLAPCR*ECCRSH
Trigger: GTGACTACGACAACACTCCCAACGACATGGAGCCAG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCGGGTTCTGCTGTGTCTaGTACCAAGCCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGGFCCV*YQAIPW
Trigger: CCAGGGGATGGCTTGGTACCAGACACAGCAGAACCC...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAAGGGAGAGTGGGGCTTaGGGCCACATGGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPRESGA*GHMGFC
Trigger: GCAGAACCCCATGTGGCCCCAAGCCCCACTCTCCCT...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCTGTGGGACAAACAAGTaGAAGAGTCTTTTGGAGACG +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCCGTNK*KSLLET
Trigger: CGTCTCCAAAAGACTCTTCCACTTGTTTGTCCCACA...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCATCCAACAGCAATGTaGCACTTAGGGCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRHPTAM*HLGLWD
Trigger: GTCCCACAGCCCTAAGTGCCACATTGCTGTTGGATG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACCTGCAGCCCTCCAATaGCCACGTCATTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPPAALQ*PRHSTG
Trigger: CCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCTCTGCTTCTCCAGCCTaGATGCGTGCGCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSSASPA*MRARGR
Trigger: CCTTCCCCGCGCACGCATCCAGGCTGGAGAAGCAGA...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGAGCGCCTTGCAGCCTTaGCACAGCACGCACGCGCGG +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLSALQP*HSTHAR
Trigger: CCGCGCGTGCGTGCTGTGCCAAGGCTGCAAGGCGCT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354574.8
CDS-3UTR TCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTCGTTCCCCTATTTACTaGTGCCCAGGAAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFRSPIY*CPGRIR
Trigger: CCGGATCCTTCCTGGGCATCAGTAAATAGGGGAACG...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GACATGGGCCTACTGCCCCGGGCAGACGGACGTCTCTTTAAGGAAGAGTGGTTGCTCCACATTGTCTTTTaGACCCGAGAGAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: DMGLLPRADGRLFKEEWLLHIVF*TRERTA
Trigger: GGCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAG...CAACCACTCTTCCTTAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR TCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCTCTGGCTTACAGGGGTaGGGGAGAGCACCTGACAAT +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGSGLQG*GRAPDN
Trigger: ATTGTCAGGTGCTCTCCCTCACCCCTGTAAGCCAGA...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCATCTGGCTTGTTAGACTaGTGCTTCTCTTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPSGLLD*CFSLLQ
Trigger: CTGCAGCAAAGAGAAGCATCAGTCTAACAAGCCAGA...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCTGGGGTGGGGGCTGTaGGCTGGCAGCCTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALLGWGL*AGSLED
Trigger: GTCCTCTAGGCTGCCAGCTCACAGCCCCCACCCCAG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGCTGGGGTGGGGGCTGTaGGCTGGCAGCCTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKLGWGL*AGSLED
Trigger: GTCCTCTAGGCTGCCAGCTCACAGCCCCCACCCCAG...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTGTACAGAATAATGAGTaGCAGGGATCAAACACGTTG +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGVQNNE*QGSNTL
Trigger: CAACGTGTTTGATCCCTGTCACTCATTATTCTGTAC...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTCTTCTGTCTGCCATTTaGGGTATTATAAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGLLSAI*GIIKCC
Trigger: ACAGCACTTTATAATACCTCAAATGGCAGACAGAAG...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354574.8
CDS-3UTR GCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCTCCCACCTCCCACCTaGGGGGAACTAGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALLPPPT*GELEAG
Trigger: CCCGGCCTCTAGTTCCCCGCAGGTGGGAGGTGGGAG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp TTCCATTCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGCAGCGCACACCTCGCTaGTCCGGAGCCGTTTCGACA +
Preference number: 4 (lower is better)
Translates to: FHSSHAGCSMVLDGLELRQRTPR*SGAVST
Trigger: TGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTG...CCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGAATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp CCACCCCATTTTAGAGACTGTCACTTGGAGGCCCTGAATGCTCCTTCCATTCCTCGTGGCAAGCCAGACTaGATCCGTCTCTCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PPHFRDCHLEALNAPSIPRGKPD*IRLSPV
Trigger: GACAGGCGAGAGACGGATGCAGTCTGGCTTGCCACG...AGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGACAGTCTCTAAAATGGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGAGAGAGAACTGCCCTaGTGTCTCCTCTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRERELP*CLLLAS
Trigger: TGACGCCAAGAGGAGACAGCAGGGCAGTTCTCTCTC...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCTTCACCTTCATTAGCTaGTGTATCTTGGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCFTFIS*CILASE
Trigger: TTCTGAGGCCAAGATACAGCAGCTAATGAAGGTGAA...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR GCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCTGGACATGGGCCTACTaGCCCGGGCAGACGGACGTC +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFWTWAY*PGQTDV
Trigger: GACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTCCA...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCACACCATACTTCTTTaGCGTCCCTTTCGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRHTILL*RPFRLD
Trigger: GTCAAGCCGAAAGGGACGGCAAAGAAGTATGGTGTG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCAAACAGAGGAGGCGGTaGCCTGCCCTTGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGKQRRR*PALVSC
Trigger: ACAACTGACAAGGGCAGGGCACCGCCTCCTCTGTTT...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTACTAACTCAGATGACTaGGATACGATACATCTTTCC +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGTNSDD*DTIHLS
Trigger: GGAAAGATGTATCGTATCGCAGTCATCTGAGTTAGT...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGGAGCTGGGGGCTACTaGCCCTACTGTGTAGGCGGT +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWGAGGY*PYCVGG
Trigger: ACCGCCTACACAGTAGGGGCAGTAGCCCCCAGCTCC...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCAGGGGCAGGGGTTTaGAAGATAAAGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRAGAGV*KIKEGQ
Trigger: CTGACCCTCCTTTATCTTGCAAACCCCTGCCCCTGC...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCACAGAGAGGACGACCTaGAGCCCTCCAATGGCCACG +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSTERTT*SPPMAT
Trigger: CGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGT...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTCAGGTGTGCTGTTCTaGTTCTCCAGCCTGGATGCG +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFSGVLF*FSSLDA
Trigger: CGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGA...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCCGCTCTGCCAGCTCATaGTGCCCTCCTTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSRSASS*CPPCLA
Trigger: TGCAAGGCAAGGAGGGCACCATGAGCTGGCAGAGCG...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCTTAAGGAAGAGTGGTTaGAAGTGTCTGTGTACTCAG +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCLRKSG*KCLCTQ
Trigger: CTGAGTACACAGACACTTCCAACCACTCTTCCTTAA...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGGCTCGCTTCTCCCATTaGGAGATATGGTTTCTGACC +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRARFSH*EIWFLT
Trigger: GGTCAGAAACCATATCTCCCAATGGGAGAAGCGAGC...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCATGCGCGGGGAAGGGCTaGAGTCTCATCCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPCAGKG*SLILLS
Trigger: AGAGAGCAGGATGAGACTCCAGCCCTTCCCCGCGCA...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGGGTTCTGCTGTGTCTaGTACCAAGCCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLGFCCV*YQAIPW
Trigger: CCAGGGGATGGCTTGGTACCAGACACAGCAGAACCC...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGCCAGCTGAACGTCTGTaGGTGAGCCGGGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLPAERL*VSRGPL
Trigger: CAGGGGACCCCGGCTCACCCACAGACGTTCAGCTGG...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCAGAAAAGGCTATCAGATaGCGCCTGAACTTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPEKAIR*RLNLRW
Trigger: CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTC...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGGAAGCCCGTCCTCCCTaGGACAGCAGGGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKEARPP*DSRGRG
Trigger: ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTC...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTAAGGTCTCAACCATCTaGAGCAGTGTTGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFKVSTI*SSVGGH
Trigger: GTGGCCTCCAACACTGCTTCAGATGGTTGAGACCTT...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTTCCGTCTGGTGAGTaGTCATCTTTCGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SMELTSSHGCSTQHACFRLPSGE*SSFGQG
Trigger: GCCCTGGCCGAAAGATGATCACTCACCAGACGGAAG...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp GAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTGCTTGCTTCCGTCTGGTaGGTGATCATCTTTCGGCCA +
Preference number: 4 (lower is better)
Translates to: ELTSSHGCSTQHACFRLVLASVW*VIIFRP
Trigger: TGGCCGAAAGATGATCACTCACCAGACGGAAGCAAG...CACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGGTCTTCTTGCACTCTaGCTGCAGTCGGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLGLLAL*LQSVGT
Trigger: AGTGCCTACCGACTGCAGTCAGAGTGCAAGAAGACC...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCTGCTGCGTGACCAGCTaGACGTCTGTGGGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCCCVTS*TSVGEP
Trigger: CGGCTCACCCACAGACGTTCAGCTGGTCACGCAGCA...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCGTGGAGCTCCTACCCTaGACATGGCTTCATGAGATG +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGVELLP*TWLHEM
Trigger: CATCTCATGAAGCCATGTTCAGGGTAGGAGCTCCAC...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCGTGAGGGAGAGCACCTaGCAATGGGTGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSVREST*QWVVMC
Trigger: GCACATCACCACCCATTGTCAGGTGCTCTCCCTCAC...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCCTGGGGTGGGGGCTGTaGGCTGGCAGCCTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYILGWGL*AGSLED
Trigger: GTCCTCTAGGCTGCCAGCTCACAGCCCCCACCCCAG...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCACCATGCTACTCACAGTaGAGCAAAATGCGACAAAAG +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPPCYSQ*SKMRQK
Trigger: CTTTTGTCGCATTTTGCTTCACTGTGAGTAGCATGG...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAACACCAGATCTCAGATaGGGCCAAGGAAATGCGCGG +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLTPDLR*GQGNAR
Trigger: CCGCGCATTTCCTTGGCCTCATCTGAGATCTGGTGT...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTATTGAGAATACAGGGTaGAAAAGAACGACGTTACTG +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGIENTG*KRTTLL
Trigger: CAGTAACGTCGTTCTTTTTCACCCTGTATTCTCAAT...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCGTACAGAATAATGAGTaGCAGGGATCAAACACGTTG +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVVQNNE*QGSNTL
Trigger: CAACGTGTTTGATCCCTGTCACTCATTATTCTGTAC...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGAAGGATCCGGCCCGCTaGAGTCAGCGCACACCTCGC +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKKDPAR*SQRTPR
Trigger: GCGAGGTGTGCGCTGACTGCAGCGGGCCGGATCCTT...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCAGACTCCGATGGACACTaGAGCACTCATCACATAAAA +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPDSDGH*STHHIK
Trigger: TTTTATGTGATGAGTGCTGCAGTGTCCATCGGAGTC...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGTTCCACGAGGCGCTCTaGCAGCTCATGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLFHEAL*QLMVPS
Trigger: GGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGAA...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAAACCCGAGAGAGAACTaGCCTGCTGTCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLNPREN*PAVSSW
Trigger: CCAAGAGGAGACAGCAGGGCAGTTCTCTCTCGGGTT...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCTCTGCCGGTTTGTTTTaGTTGCAGTGGTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVSAGLF*LQWFPN
Trigger: ATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGA...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGGCTGGAGTCTCATCCTaGTCTCTTCGGGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVAGVSS*SLRGGS
Trigger: CGAGCCGCCCCGAAGAGAGCAGGATGAGACTCCAGC...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAAGAGGAGGTCACAAGTaGACTCCTCCCGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPRGGHK*TPPDVR
Trigger: GCGCACATCGGGAGGAGTGCACTTGTGACCTCCTCT...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355312.8
CDS-3UTR GCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTATTCGGCTTGACCCCATaGCATCTGGCTCCATGTCGT +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLFGLTP*HLAPCR
Trigger: ACGACATGGAGCCAGATGGCATGGGGTCAAGCCGAA...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAGGCCACATGGGGTTCTaGTGTGTCTGGTACCAAGCC +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPGHMGF*CVWYQA
Trigger: GGCTTGGTACCAGACACAGCAGAACCCCATGTGGCC...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTACTGGGAGGGTCTTCTTaGACTCTGACTGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLLGGSS*TLTAVG
Trigger: ACCGACTGCAGTCAGAGTGCAAGAAGACCCTCCCAG...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCCTTTCTCTACATACATaGTTGGAGATACCCCAAACT +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCLSLHT*LEIPQT
Trigger: AGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAG...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCACTAACTCAGATGACTaGGATACGATACATCTTTCC +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCTNSDD*DTIHLS
Trigger: GGAAAGATGTATCGTATCGCAGTCATCTGAGTTAGT...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGGGAGCTGGGGGCTACTaGCCCTACTGTGTAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVGAGGY*PYCVGG
Trigger: ACCGCCTACACAGTAGGGGCAGTAGCCCCCAGCTCC...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAATGAGGCCAAGGAAATaGGCGGGGCACATACAGAGA +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRMRPRK*AGHIQR
Trigger: TCTCTGTATGTGCCCCGCGCATTTCCTTGGCCTCAT...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAATCCAGCCTGGATGCGTaGGCGGGGAAGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQESSLDA*AGKGWS
Trigger: ACTCCAGCCCTTCCCCGCGCACGCATCCAGGCTGGA...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCAGTTCTCACGCTCGAATaGAGTTGCTTGCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPVLTLE*SCLLRS
Trigger: AGATCTTAGCAAGCAACTCCATTCGAGCGTGAGAAC...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTAAATCTGCCCTGCTTTaGAGGCAACATGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFKSALL*RQHGVG
Trigger: CCCCACTCCATGTTGCCTCCAAAGCAGGGCAGATTT...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTCCATTCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGCGCTCTGCCAGCTCATaGTGCCCTCCTTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: FHSSHAGCSMVLDGLELRRSASS*CPPCLA
Trigger: TGCAAGGCAAGGAGGGCACCATGAGCTGGCAGAGCG...CCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTCATCGTACACATCCATaGCAAGTTCTTCAAACAAAT +
Preference number: 4 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGHRTHP*QVLQTN
Trigger: ATTTGTTTGAAGAACTTGCCATGGATGTGTACGATG...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTGAGCGTGGCAAACTCATaGGCGTTGAACCGAGCTAAC +
Preference number: 4 (lower is better)
Translates to: ELTSSHGCSTQHACFRLVSVANS*ALNRAN
Trigger: GTTAGCTCGGTTCAACGCCCATGAGTTTGCCACGCT...CACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGTCTCGTACATGGACATaGGCCTACTGCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVSRTWT*AYCPGQ
Trigger: CTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGA...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCCTGGCTCCATGTCGTTaGGAGTGTTGTCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGLAPCR*ECCRSH
Trigger: GTGACTACGACAACACTCCCAACGACATGGAGCCAG...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCAGGGAGAGTGGGGCTTaGGGCCACATGGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFRESGA*GHMGFC
Trigger: GCAGAACCCCATGTGGCCCCAAGCCCCACTCTCCCT...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGCAGTCGGTAGGCACTaGACGTCAGTAAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLAVGRH*TSVNEG
Trigger: CCCTTCGTTTACTGACGTCCAGTGCCTACCGACTGC...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCCCAGCTGAACGTCTGTaGGTGAGCCGGGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLPAERL*VSRGPL
Trigger: CAGGGGACCCCGGCTCACCCACAGACGTTCAGCTGG...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCGTAGTGATACCTAAATaGGTGGCACAAAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCVVIPK*VAQNEF
Trigger: GAACTCATTTTGTGCCACCCATTTAGGTATCACTAC...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCGAAGCCCGTCCTCCCTaGGACAGCAGGGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIEARPP*DSRGRG
Trigger: ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTC...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAGAAGCCCGTCCTCCCTaGGACAGCAGGGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLEARPP*DSRGRG
Trigger: ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTC...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCCCTGCAGCCCTCCAATaGCCACGTCATTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFPAALQ*PRHSTG
Trigger: CCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGG...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGCGTTCCCCTATTTACTaGTGCCCAGGAAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: IYGIDIFAWMLHAARLLPRSPIY*CPGRIR
Trigger: CCGGATCCTTCCTGGGCATCAGTAAATAGGGGAACG...CGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACGTTCCCCTATTTACTaGTGCCCAGGAAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPRSPIY*CPGRIR
Trigger: CCGGATCCTTCCTGGGCATCAGTAAATAGGGGAACG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAAAGGTCTCAACCATCTaGAGCAGTGTTGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLKVSTI*SSVGGH
Trigger: GTGGCCTCCAACACTGCTTCAGATGGTTGAGACCTT...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCGCCTTCATCTATATGGTTTCTGACCTaGTCCGGTCTCGTACATGGA +
Preference number: 4 (lower is better)
Translates to: HSPRPFCAGSFPSGAPSSIWFLT*SGLVHG
Trigger: TCCATGTACGAGACCGGATCAGGTCAGAAACCATAT...AGATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR TCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCGGTCTTCTTGCACTCTaGCTGCAGTCGGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSGLLAL*LQSVGT
Trigger: AGTGCCTACCGACTGCAGTCAGAGTGCAAGAAGACC...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTTGCTGCGTGACCAGCTaGACGTCTGTGGGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALCCVTS*TSVGEP
Trigger: CGGCTCACCCACAGACGTTCAGCTGGTCACGCAGCA...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTACTTTTGGATGTATGTaGTCAACTCAACAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGTFGCM*STQQLL
Trigger: CAACAACTGTTGAGTTGATCACATACATCCAAAAGT...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTAACAGGGTAAAACACTaGGAAGAAATGAACCAATTC +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGNRVKH*EEMNQF
Trigger: GAATTGGTTCATTTCTTCTCAGTGTTTTACCCTGTT...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCAACAGGGTAAAACACTaGGAAGAAATGAACCAATTC +
Preference number: 4 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCNRVKH*EEMNQF
Trigger: GAATTGGTTCATTTCTTCTCAGTGTTTTACCCTGTT...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCTTTGCTGCAGGTTTTaGACAAACTGTCTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRLCCRF*TNCLAY
Trigger: GTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGGTGAAGCAACTCATGTaGGAAAGCTGTAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRVKQLM*ESCKWS
Trigger: TGACCACTTACAGCTTTCTCACATGAGTTGCTTCAC...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GACATGGGCCTACTGCCCCGGGCAGACGGACGTCTCTTTAAGGAAGAGTGGTTGGAGCTAACTTCTGTCTaGCCTGATTTCGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: DMGLLPRADGRLFKEEWLELTSV*PDFVLM
Trigger: CATCAACACGAAATCAGGGCAGACAGAAGTTAGCTC...CAACCACTCTTCCTTAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR GCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAAACCCGAGAGAGAACTaGCCTGCTGTCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPNPREN*PAVSSW
Trigger: CCAAGAGGAGACAGCAGGGCAGTTCTCTCTCGGGTT...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GGTCCTTCCCTTCTGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTGGGTTCACCACGTCCATTCTaGGCAGGGTCCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPSLLVRLHLPWTFYKLGSPRPF*AGSFPS
Trigger: AGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGA...ACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTTCCTCACATGCAGGCTaGTCCATGGTGCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: SMELTSSHGCSTQHACFRSSHAG*SMVLDG
Trigger: TCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGA...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp CGTCTGGTGAGTGATCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTCTCTCCTCACATGCAGGCTaGTCCATGGTGCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: RLVSDHLSARAGIFGLSLSSHAG*SMVLDG
Trigger: TCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGA...GAGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCACCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp ATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCCACGCAGCACGCTTaGTTCCGTCTGGTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: IYGIDIFAWMLHAARLLPSTQHA*FRLVSD
Trigger: ATCACTCACCAGACGGAAGCAAGCGTGCTGCGTGGA...CGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTACATCTTCGCATGGATaGTCCACGCAGCACGCTTGC +
Preference number: 4 (lower is better)
Translates to: SMELTSSHGCSTQHACFRTSSHG*STQHAC
Trigger: GCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGT...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp CCACCCCATTTTAGAGACTGTCACTTGGAGGCCCTGAATGCTCCTTCCATTCCTACATCTTCGCATGGATaGTCCACGCAGCACGCTTGC +
Preference number: 4 (lower is better)
Translates to: PPHFRDCHLEALNAPSIPTSSHG*STQHAC
Trigger: GCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGT...AGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGACAGTCTCTAAAATGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTATGGACATGGGCCTACTaGCCCGGGCAGACGGACGTC +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLWTWAY*PGQTDV
Trigger: GACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTCCA...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCCTGGGAGGGTCTTCTTaGACTCTGACTGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSLGGSS*TLTAVG
Trigger: ACCGACTGCAGTCAGAGTGCAAGAAGACCCTCCCAG...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGAGGCGGTGCCCTaGCCTTGTCAGTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWEEAVP*PCQLLF
Trigger: GAACAACAACTGACAAGGGCAGGGCACCGCCTCCTC...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAAAACAGAGGAGGCGGTaGCCTGCCCTTGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPKQRRR*PALVSC
Trigger: ACAACTGACAAGGGCAGGGCACCGCCTCCTCTGTTT...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCAAGGAAATTCACTTATTaGACGATGCTTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPRKFTY*TMLGRE
Trigger: TTCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCT...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAAGGAGCTGGGGGCTACTaGCCCTACTGTGTAGGCGGT +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQEGAGGY*PYCVGG
Trigger: ACCGCCTACACAGTAGGGGCAGTAGCCCCCAGCTCC...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGGCCAGGCCCTCACACTaGACAGCTTACAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKARPSH*TAYRAL
Trigger: CAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGC...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCTCTTACAACTGGAAATaGTTTGTTGGTCCCCATGTT +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVSYNWK*FVGPHV
Trigger: AACATGGGGACCAACAAAGCATTTCCAGTTGTAAGA...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCACAGAGAGGACGACCTaGAGCCCTCCAATGGCCACG +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFTERTT*SPPMAT
Trigger: CGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGT...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTCAAATAAGAACTATTTaGATTCCAAGGCAGATGACG +
Preference number: 4 (lower is better)
Translates to: FPEASTEARPPWDSRGRGQIRTI*IPRQMT
Trigger: CGTCATCTGCCTTGGAATGCAAATAGTTCTTATTTG...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCGTAGAGCCTGTTTATTaGATAACTAGCAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVVEPVY*ITSRHK
Trigger: TTTGTGCCTGCTAGTTATGCAATAAACAGGCTCTAC...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCTCCAGCCTGGATGCGTaGGCGGGGAAGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYISSLDA*AGKGWS
Trigger: ACTCCAGCCCTTCCCCGCGCACGCATCCAGGCTGGA...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACGCCCTAGACTCCGATaGACACTGCAGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPRPRLR*TLQHSS
Trigger: TGATGAGTGCTGCAGTGTCCATCGGAGTCTAGGGCG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCCTCACTTGGGAGATATaGCGCCCTAGACTCCGATGG +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSLTWEI*RPRLRW
Trigger: CCATCGGAGTCTAGGGCGCCATATCTCCCAAGTGAG...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACTCACTTGGGAGATATaGCGCCCTAGACTCCGATGG +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPLTWEI*RPRLRW
Trigger: CCATCGGAGTCTAGGGCGCCATATCTCCCAAGTGAG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTTCAGATGCCTCACTTaGGAGATATGGCGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFFRCLT*EIWRPR
Trigger: TCTAGGGCGCCATATCTCCCAAGTGAGGCATCTGAA...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTGGGAGGCAACATGGAGTaGGGTGTTTCCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: ELTSSHGCSTQHACFRLVGGNME*GVSFFR
Trigger: CCTGAAAAAGGAAACACCCCACTCCATGTTGCCTCC...CACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGGAGGCAACATGGAGTaGGGTGTTTCCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRGGNME*GVSFFR
Trigger: CCTGAAAAAGGAAACACCCCACTCCATGTTGCCTCC...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCACTCTCAACGCTGTGCTaGTTATTGATGGTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPLSTLC*LLMVFS
Trigger: ACTGAAAACCATCAATAACCAGCACAGCGTTGAGAG...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCGCCTTCATCTCCATGGTGCTGGATaGATTAGAGTTAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TIHHVHSAQGPSLLVRLHLHGAG*IRVKGS
Trigger: TGACCCCTTAACTCTAATCCATCCAGCACCATGGAG...ATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGTCTCGTACATGGACATaGGCCTACTGCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLSRTWT*AYCPGQ
Trigger: CTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGA...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTGCACCAGAAGATCAATCCGGTCTCGTACATaGACATGGGCCTACTGCCCC +
Preference number: 4 (lower is better)
Translates to: PHQCQGLSPQATVCTRRSIRSRT*TWAYCP
Trigger: GGGGCAGTAGGCCCATGTCCATGTACGAGACCGGAT...TGATCTTCTGGTGCAAACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGGGGCTTGGGGCCACATaGGGTTCTGCTGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLGLGAT*GSAVSG
Trigger: ACCAGACACAGCAGAACCCCATGTGGCCCCAAGCCC...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCCTTTATCTCATTCCATaGAGCCTTCAAGATGACAAG +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVLYLIP*SLQDDK
Trigger: CTTGTCATCTTGAAGGCTCCATGGAATGAGATAAAG...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCCTGCAGCCCTCCAATaGCCACGTCATTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALPAALQ*PRHSTG
Trigger: CCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 72 bp ATCTGCCTGGCACCACCCCATTTTAGAGACTGTCACTaGGAGGCCCTGAATGCTCCTTCCATTCCTCACATG +
Preference number: 4 (lower is better)
Translates to: ICLAPPHFRDCH*EALNAPSIPHM
Trigger: CATGTGAGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGACAGTCTCTAAAATGGGGTGGTGCCAGGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp ATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGAAGGTCTCAACCATCTaGAGCAGTGTTGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: IYGIDIFAWMLHAARLLPKVSTI*SSVGGH
Trigger: GTGGCCTCCAACACTGCTTCAGATGGTTGAGACCTT...CGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGATGCTGTCCATTTTTGTaGTCTGGTTTCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRCCPFL*SGFLPQ
Trigger: CTGTGGCAGGAAACCAGATCACAAAAATGGACAGCA...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTATATGGTTTCTGACCTaGTCCGGTCTCGTACATGGA +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFIWFLT*SGLVHG
Trigger: TCCATGTACGAGACCGGATCAGGTCAGAAACCATAT...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCGGGAGATATGGTTTCTaGCCTGATCCGGTCTCGTAC +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSGRYGF*PDPVSY
Trigger: GTACGAGACCGGATCAGGTCAGAAACCATATCTCCC...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCCTGAACATGGCTTCATaGGATGTCCTGTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSLNMAS*DVLWWV
Trigger: GACCCACCACAGGACATCTCATGAAGCCATGTTCAG...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCCCTGACAATGGGTGGTaGTGTGCGTGGAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFPDNGW*CAWSSY
Trigger: GTAGGAGCTCCACGCACATCACCACCCATTGTCAGG...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCCCTGACAATGGGTGGTaGTGTGCGTGGAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCPDNGW*CAWSSY
Trigger: GTAGGAGCTCCACGCACATCACCACCCATTGTCAGG...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGGTCAGCTAAGGACATaGAGCCTGCAGAAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLGQLRT*SLQKRL
Trigger: TAGCCTTTTCTGCAGGCTTCATGTCCTTAGCTGACC...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTACAGCGCACACCTCGCTaGTCCGGAGCCGTTTCGACA +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLQRTPR*SGAVST
Trigger: TGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTG...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTGGTTGTAAGGATCCGGCCCGCTaGAGTCAGCGCACACCTCGC +
Preference number: 4 (lower is better)
Translates to: VGSVCVLRTSLHLIYIGCKDPAR*SQRTPR
Trigger: GCGAGGTGTGCGCTGACTGCAGCGGGCCGGATCCTT...ACAACCAATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR GCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTGGTGTGTGTTTCAGATaGCTCACTTGGGAGATATGG +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFGVCFR*LTWEIW
Trigger: CCATATCTCCCAAGTGAGGCATCTGAAACACACACC...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCTCAGCCTGTAAAATCTaGCCTGCTTTGGAGGCAACA +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGSACKI*PALEAT
Trigger: TGTTGCCTCCAAAGCAGGGCAGATTTTACAGGCTGA...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGATCAGCCTGTAAAATCTaGCCTGCTTTGGAGGCAACA +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRSACKI*PALEAT
Trigger: TGTTGCCTCCAAAGCAGGGCAGATTTTACAGGCTGA...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTCAGACAAATCCAGGCTaGTGTCTGCCATTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFQTNPG*CLPFEV
Trigger: TACCTCAAATGGCAGACAGCAGCCTGGATTTGTCTG...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR GCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCCGTGGCAAGCCAGACTaGATCCGTCTCTCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLRGKPD*IRLSPV
Trigger: GACAGGCGAGAGACGGATGCAGTCTGGCTTGCCACG...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGAGAGAACTGCCCTaGTGTCTCCTCTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWERELP*CLLLAS
Trigger: TGACGCCAAGAGGAGACAGCAGGGCAGTTCTCTCTC...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTGAGTGATCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTCTCCTTTGGGAGAGAGAACTGCCCTaGTGTCTCCTCTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: VSDHLSARAGIFGLSLLWERELP*CLLLAS
Trigger: TGACGCCAAGAGGAGACAGCAGGGCAGTTCTCTCTC...CCAAAGGAGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGTCTGCCGGTTTGTTTTaGTTGCAGTGGTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRSAGLF*LQWFPN
Trigger: ATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGA...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCTAACGGGTCCCAGCTaGGGCGGCGCTGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNLTGPS*GGADGG
Trigger: GCCGCCGTCAGCGCCGCCGCAGCTGGGACCCGTTAG...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000553118.5
CDS-3UTR GCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCCCCCATAGTCTCCTCTaGCCTGCTGCCGTGTACCTG +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLPHSLL*PAAVYL
Trigger: CAGGTACACGGCAGCAGGGCAGAGGAGACTATGGGG...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCGGAGCTGGGGGCTACTaGCCCTACTGTGTAGGCGGT +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIGAGGY*PYCVGG
Trigger: ACCGCCTACACAGTAGGGGCAGTAGCCCCCAGCTCC...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGAATGTTCAGATAAGGTaGGATTTGCCAACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRNVQIR*DLPTGA
Trigger: TGCTCCTGTTGGCAAATCGCACCTTATCTGAACATT...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCCAGTTTCATAAAGTaGACCTCTGCCCTATCAGCT +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRASFIK*TSALSA
Trigger: AGCTGATAGGGCAGAGGTGCACTTTATGAAACTGGC...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCGCCCTAGACTCCGATaGACACTGCAGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVRPRLR*TLQHSS
Trigger: TGATGAGTGCTGCAGTGTCCATCGGAGTCTAGGGCG...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGCGCCCTAGACTCCGATaGACACTGCAGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVRERPRLR*TLQHSS
Trigger: TGATGAGTGCTGCAGTGTCCATCGGAGTCTAGGGCG...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCGCTTTGGAGGCAACATaGAGTGGGGTGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGALEAT*SGVFPF
Trigger: AAAAGGAAACACCCCACTCCATGTTGCCTCCAAAGC...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CGTCTGGTGAGTGATCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTCTCAAATCTGCCCTGCTTTaGAGGCAACATGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RLVSDHLSARAGIFGLSLKSALL*RQHGVG
Trigger: CCCCACTCCATGTTGCCTCCAAAGCAGGGCAGATTT...GAGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCACCAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp TCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGGGTCAGAGAATCCTGTGTGCCTaGGTCTGCTCCATATACTGC +
Preference number: 4 (lower is better)
Translates to: SSHAGCSMVLDGLELRGQRILCA*VCSIYC
Trigger: GCAGTATATGGAGCAGACCCAGGCACACAGGATTCT...CTGACCCCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp GACATGGGCCTACTGCCCCGGGCAGACGGACGTCTCTTTAAGGAAGAGTGGTTGCTCTCAACGCTGTGCTaGTTATTGATGGTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: DMGLLPRADGRLFKEEWLLSTLC*LLMVFS
Trigger: ACTGAAAACCATCAATAACCAGCACAGCGTTGAGAG...CAACCACTCTTCCTTAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGCAGCAAAGGCGGCGGTaGCGGCGGCGCTTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQQQRRR*RRRFRS
Trigger: AGAGCGGAAGCGCCGCCGCCACCGCCGCCTTTGCTG...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000553118.5
CDS-3UTR CCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCTCTTTAAGGAAGAGTaGTTGGAAGTGTCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRLFKEE*LEVSVY
Trigger: GTACACAGACACTTCCAACCACTCTTCCTTAAAGAG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCTCTGCTTCTCCAGCCTaGATGCCCTTCGGGCGCTTT +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCSASPA*MPFGRF
Trigger: AAAGCGCCCGAAGGGCATCCAGGCTGGAGAAGCAGA...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355312.8
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTGGGCTTGGGGCCACATaGGGTTCTGCTGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALGLGAT*GSAVSG
Trigger: ACCAGACACAGCAGAACCCCATGTGGCCCCAAGCCC...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGATGTCGTACGCACACTaGATGACCTGCTGCGTGACC +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWMSYAH*MTCCVT
Trigger: GGTCACGCAGCAGGTCATCCAGTGTGCGTACGACAT...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCACTTTATCTCATTCCATaGAGCCTTCAAGATGACAAG +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPLYLIP*SLQDDK
Trigger: CTTGTCATCTTGAAGGCTCCATGGAATGAGATAAAG...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGATTTGAACAAACTGTCTaGCTTACAGGGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRFEQTV*LTGVRE
Trigger: CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAA...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAGTGGGGGCTGTGAGCTaGCAGCCTAGAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLVGAVS*QPRGHS
Trigger: GCTGTGTCCTCTAGGCTGCCAGCTCACAGCCCCCAC...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACATAACACACAGGGTTaGCCGGCTCCATTACGGGTA +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPHNTQG*PAPLRV
Trigger: TACCCGTAATGGAGCCGGCCAACCCTGTGTGTTATG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCTTTCATGACAGCATATaGTCAAGCTATAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: NARGTYREDDLQPSNGHVFHDSI*SSYKGV
Trigger: CACACCTTTATAGCTTGACCATATGCTGTCATGAAA...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGGAGTTTTGGCACCGTaGGCTAACCGAGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWGVLAP*ANRALF
Trigger: GAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCC...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAACTTGTTTGGAGTTTTaGCACCGTGGGCTAACCGAG +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLTCLEF*HRGLTE
Trigger: CTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GACAGCAGACACCATGGAAGCAGCACAAAGATGACTAGGGTTGCTTTGCAAAGCAAGGTCTCAACCATCTaGAGCAGTGTTGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: DSRHHGSSTKMTRVALQSKVSTI*SSVGGH
Trigger: GTGGCCTCCAACACTGCTTCAGATGGTTGAGACCTT...GCTTTGCAAAGCAACCCTAGTCATCTTTGTGCTGCTTCCATGGTGTCTGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR TCA 90 bp ATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGATGAGTACTCAGGATTaGCCGGAAGAAAGGGGACGA +
Preference number: 4 (lower is better)
Translates to: IYGIDIFAWMLHAARLLPMSTQD*PEERGR
Trigger: TCGTCCCCTTTCTTCCGGTCAATCCTGAGTACTCAT...CGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCCAAACTCATGGGCGTTaGACCGAGCTAACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSQTHGR*TELTSV
Trigger: GACAGAAGTTAGCTCGGTTCAACGCCCATGAGTTTG...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GACATGGGCCTACTGCCCCGGGCAGACGGACGTCTCTTTAAGGAAGAGTGGTTGATTGATCTATGGAATTaGCATCTTCGCATGGATGCT +
Preference number: 4 (lower is better)
Translates to: DMGLLPRADGRLFKEEWLIDLWN*HLRMDA
Trigger: AGCATCCATGCGAAGATGTCAATTCCATAGATCAAT...CAACCACTCTTCCTTAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR TCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCATCACTCTGGAGTGTTTaGAGCTTTTTCTGCATAATT +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPSLWSV*SFFCII
Trigger: AATTATGCAGAAAAAGCTTCAAACACTCCAGAGTGA...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR TCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGGGAGATATGGTTTCTaGCCTGATCCGGTCTCGTAC +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWGRYGF*PDPVSY
Trigger: GTACGAGACCGGATCAGGTCAGAAACCATATCTCCC...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGATACGTGTATCCTCTCTaGGCAGGGAATATAACTGTC +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRYVYPL*AGNITV
Trigger: GACAGTTATATTCCCTGCTCAGAGAGGATACACGTA...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGCTGAACATGGCTTCATaGGATGTCCTGTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWLNMAS*DVLWWV
Trigger: GACCCACCACAGGACATCTCATGAAGCCATGTTCAG...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGTCTGGCTTACAGGGGTaGGGGAGAGCACCTGACAAT +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLSGLQG*GRAPDN
Trigger: ATTGTCAGGTGCTCTCCCTCACCCCTGTAAGCCAGA...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTAAGCTGACTTTTGGATaGAGGGTACAACACAGTGTC +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFKLTFG*RVQHSV
Trigger: GACACTGTGTTGTACCCTTCATCCAAAAGTCAGCTT...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTGTGAAGCAACTCATGTaGGAAAGCTGTAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFVKQLM*ESCKWS
Trigger: TGACCACTTACAGCTTTCTCACATGAGTTGCTTCAC...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTATCAGCCTGTAAAATCTaGCCTGCTTTGGAGGCAACA +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLSACKI*PALEAT
Trigger: TGTTGCCTCCAAAGCAGGGCAGATTTTACAGGCTGA...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCGTGGCAAGCCAGACTaGATCCGTCTCTCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDRGKPD*IRLSPV
Trigger: GACAGGCGAGAGACGGATGCAGTCTGGCTTGCCACG...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCCGTGGCAAGCCAGACTaGATCCGTCTCTCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIRGKPD*IRLSPV
Trigger: GACAGGCGAGAGACGGATGCAGTCTGGCTTGCCACG...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGGAGAGAGAACTGCCCTaGTGTCTCCTCTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLERELP*CLLLAS
Trigger: TGACGCCAAGAGGAGACAGCAGGGCAGTTCTCTCTC...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCAACCCGAGAGAGAACTaGCCTGCTGTCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCNPREN*PAVSSW
Trigger: CCAAGAGGAGACAGCAGGGCAGTTCTCTCTCGGGTT...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCTTCGGCTTGACCCCATaGCATCTGGCTCCATGTCGT +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCFGLTP*HLAPCR
Trigger: ACGACATGGAGCCAGATGGCATGGGGTCAAGCCGAA...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTGGCCACATGGGGTTCTaGTGTGTCTGGTACCAAGCC +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALGHMGF*CVWYQA
Trigger: GGCTTGGTACCAGACACAGCAGAACCCCATGTGGCC...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCTTTCTCTACATACATaGTTGGAGATACCCCAAACT +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRLSLHT*LEIPQT
Trigger: AGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCCCCCATAGTCTCCTCTaGCCTGCTGCCGTGTACCTG +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIPHSLL*PAAVYL
Trigger: CAGGTACACGGCAGCAGGGCAGAGGAGACTATGGGG...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGCGCCCTAGACTCCGATaGACACTGCAGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLRPRLR*TLQHSS
Trigger: TGATGAGTGCTGCAGTGTCCATCGGAGTCTAGGGCG...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCGCCCTAGACTCCGATaGACACTGCAGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVRPRLR*TLQHSS
Trigger: TGATGAGTGCTGCAGTGTCCATCGGAGTCTAGGGCG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GGTCCTTCCCTTCTGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTGGGTTTCAGATGCCTCACTTaGGAGATATGGCGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: GPSLLVRLHLPWTFYKLGFRCLT*EIWRPR
Trigger: TCTAGGGCGCCATATCTCCCAAGTGAGGCATCTGAA...ACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACATCTGAAGCAGTGTTaGAGGCCACGGTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPHLKQC*RPRCVF
Trigger: AAACACACACCGTGGCCTCCAACACTGCTTCAGATG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCAGGATGAAAGAAGTTaGCTTGTGCTCCTAAAGATA +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRQDERS*LVLLKI
Trigger: TATCTTTAGGAGCACAAGCCAACTTCTTTCATCCTG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAGGAGGCAACATGGAGTaGGGTGTTTCCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPGGNME*GVSFFR
Trigger: CCTGAAAAAGGAAACACCCCACTCCATGTTGCCTCC...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGGGAGGCAACATGGAGTaGGGTGTTTCCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: IYGIDIFAWMLHAARLLPGGNME*GVSFFR
Trigger: CCTGAAAAAGGAAACACCCCACTCCATGTTGCCTCC...CGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTACGCTCTGCCAGCTCATaGTGCCCTCCTTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLRSASS*CPPCLA
Trigger: TGCAAGGCAAGGAGGGCACCATGAGCTGGCAGAGCG...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TACTCTTTGGCATCTGGCATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGTTACCAGGGCGCTGTaGTTTTGCGTGGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: YSLASGILNTIHHVHSAQVTRAL*FCVASQ
Trigger: CTGGCTTGCCACGCAAAACCACAGCGCCCTGGTAAC...CTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAATGCCAGATGCCAAAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp TTCCATTCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGAGGGTCCTTCCCTTCTaGTGCGCCTTCATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: FHSSHAGCSMVLDGLELRRVLPF*CAFIFH
Trigger: ATGGAAGATGAAGGCGCACCAGAAGGGAAGGACCCT...CCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGAATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGCTGGCTCCATGTCGTTaGGAGTGTTGTCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWLAPCR*ECCRSH
Trigger: GTGACTACGACAACACTCCCAACGACATGGAGCCAG...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCGGGCTTGGGGCCACATaGGGTTCTGCTGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIGLGAT*GSAVSG
Trigger: ACCAGACACAGCAGAACCCCATGTGGCCCCAAGCCC...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGCAGTCGGTAGGCACTaGACGTCAGTAAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCAVGRH*TSVNEG
Trigger: CCCTTCGTTTACTGACGTCCAGTGCCTACCGACTGC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCGCAGTCGGTAGGCACTaGACGTCAGTAAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFAVGRH*TSVNEG
Trigger: CCCTTCGTTTACTGACGTCCAGTGCCTACCGACTGC...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTCCAGCTGAACGTCTGTaGGTGAGCCGGGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLPAERL*VSRGPL
Trigger: CAGGGGACCCCGGCTCACCCACAGACGTTCAGCTGG...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCATGTCGTACGCACACTaGATGACCTGCTGCGTGACC +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCMSYAH*MTCCVT
Trigger: GGTCACGCAGCAGGTCATCCAGTGTGCGTACGACAT...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGACTCTTTCAGAGCTTTaGGGTAGCAGGCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVRETLSEL*GSRQPA
Trigger: AGCTGGCTGCCTGCTACCCCAAAGCTCTGAAAGAGT...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGATGTGGGACAAACAAGTaGAAGAGTCTTTTGGAGACG +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRCGTNK*KSLLET
Trigger: CGTCTCCAAAAGACTCTTCCACTTGTTTGTCCCACA...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCGGAGTTTTGGCACCGTaGGCTAACCGAGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFGVLAP*ANRALF
Trigger: GAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCC...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCACTTGTTTGGAGTTTTaGCACCGTGGGCTAACCGAG +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSTCLEF*HRGLTE
Trigger: CTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCAAGAAAACTATACTATTaGAAAGCTCATGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPRKLYY*KAHGCH
Trigger: ATGGCACCCATGAGCTTTCCAATAGTATAGTTTTCT...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGAGGGATCAAACACGTTaGAATAAAAGGCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRRDQTR*NKRHLS
Trigger: ACTGAGATGCCTTTTATTCCAACGTGTTTGATCCCT...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAGCGCCTTGCAGCCTTaGCACAGCACGCACGCGCGG +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQSALQP*HSTHAR
Trigger: CCGCGCGTGCGTGCTGTGCCAAGGCTGCAAGGCGCT...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354574.8
ENST00000553118.5
3UTR CAA 72 bp AGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTaGAGAAGCCGTGCACAGCTCCCGAGTTGTGCGTTT +
Preference number: 4 (lower is better)
Translates to: RRVLLLVLQLNH*RSRAQLPSCAF
Trigger: AAACGCACAACTCGGGAGCTGTGCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTCCATTCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGCAAACTCATGGGCGTTaGACCGAGCTAACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: FHSSHAGCSMVLDGLELRQTHGR*TELTSV
Trigger: GACAGAAGTTAGCTCGGTTCAACGCCCATGAGTTTG...CCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGAATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCAAACTCATGGGCGTTaGACCGAGCTAACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVQTHGR*TELTSV
Trigger: GACAGAAGTTAGCTCGGTTCAACGCCCATGAGTTTG...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCTCCACATTGTCTTTTaGACCCGAGAGAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVLHIVF*TRERTA
Trigger: GGCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAG...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp GACAGCAGACACCATGGAAGCAGCACAAAGATGACTAGGGTTGCTTTGCAAAGCAAGCTGGGTGTGGTGTaGGTTCAGCTGTCTACTCTT +
Preference number: 4 (lower is better)
Translates to: DSRHHGSSTKMTRVALQSKLGVV*VQLSTL
Trigger: AAGAGTAGACAGCTGAACTCACACCACACCCAGCTT...GCTTTGCAAAGCAACCCTAGTCATCTTTGTGCTGCTTCCATGGTGTCTGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR TCA 90 bp TACTCTTTGGCATCTGGCATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGTCACTTGGAGGCCCTaGATGCTCCTTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: YSLASGILNTIHHVHSAQVTWRP*MLLPFL
Trigger: GAGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGAC...CTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAATGCCAGATGCCAAAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGGGGAGATATGGTTTCTaGCCTGATCCGGTCTCGTAC +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLGRYGF*PDPVSY
Trigger: GTACGAGACCGGATCAGGTCAGAAACCATATCTCCC...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAAGGTCTTCTTGCACTCTaGCTGCAGTCGGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQEGLLAL*LQSVGT
Trigger: AGTGCCTACCGACTGCAGTCAGAGTGCAAGAAGACC...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCGGTCTTCTTGCACTCTaGCTGCAGTCGGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLGLLAL*LQSVGT
Trigger: AGTGCCTACCGACTGCAGTCAGAGTGCAAGAAGACC...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGACTTTTGGATGTATGTaGTCAACTCAACAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRTFGCM*STQQLL
Trigger: CAACAACTGTTGAGTTGATCACATACATCCAAAAGT...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGGTGGAGCTCCTACCCTaGACATGGCTTCATGAGATG +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVVELLP*TWLHEM
Trigger: CATCTCATGAAGCCATGTTCAGGGTAGGAGCTCCAC...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTACCTGCACATGGTCTCTaGAAGTGTTCAAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLPAHGL*KCSNWL
Trigger: CAACCAATTTGAACACTTTCAGAGACCATGTGCAGG...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGAGGAGCAGAGAACTCTaGCACCAGATCTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVRERSREL*HQISDE
Trigger: CTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCT...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAATGAAATGCTGTGTTTaGTCTTTGGGCCCAATTCAC +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRMKCCV*SLGPIH
Trigger: GTGAATTGGGCCCAAAGATCAAACACAGCATTTCAT...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGCTCATGGGTGCCATTaGGGACAAAAACAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCAHGCH*GQKQAS
Trigger: ACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCATCACTCTGGAGTGTTTaGAGCTTCTGCCGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPSLWSV*SFCRFV
Trigger: AACAAACCGGCAGAAGCTTCAAACACTCCAGAGTGA...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354574.8
ENST00000457474.6
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCTCCCACCTCCCACCTaGGGGGAACTAGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNLPPPT*GELEAG
Trigger: CCCGGCCTCTAGTTCCCCGCAGGTGGGAGGTGGGAG...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTCAGCGCACACCTCGCTaGTCCGGAGCCGTTTCGACA +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLQRTPR*SGAVST
Trigger: TGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTG...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAGGATCCGGCCCGCTaGAGTCAGCGCACACCTCGC +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQKDPAR*SQRTPR
Trigger: GCGAGGTGTGCGCTGACTGCAGCGGGCCGGATCCTT...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAAAGGATCCGGCCCGCTaGAGTCAGCGCACACCTCGC +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQKDPAR*SQRTPR
Trigger: GCGAGGTGTGCGCTGACTGCAGCGGGCCGGATCCTT...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTGGTGTGTGTTTCAGATaGCTCACTTGGGAGATATGG +
Preference number: 4 (lower is better)
Translates to: SMELTSSHGCSTQHACFRGVCFR*LTWEIW
Trigger: CCATATCTCCCAAGTGAGGCATCTGAAACACACACC...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCATCAGCCTGTAAAATCTaGCCTGCTTTGGAGGCAACA +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPSACKI*PALEAT
Trigger: TGTTGCCTCCAAAGCAGGGCAGATTTTACAGGCTGA...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCGCCTTCATCTTCTTAGCAGCTTTTaGCAATTCAGACAAATCCAG +
Preference number: 4 (lower is better)
Translates to: TIHHVHSAQGPSLLVRLHLLSSF*QFRQIQ
Trigger: CTGGATTTGTCTGAATTGGCAAAAGCTGCTAAGAAG...ATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp GAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTGTTTCCAAGCAACTTCTaGCGGTTTGTTTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: ELTSSHGCSTQHACFRLVFPSNF*RFVLLA
Trigger: TGCAAGCAAAACAAACCGGCAGAAGTTGCTTGGAAA...CACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320063.10
CDS-3UTR GCA 90 bp CCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTGCACCAGAAGATCACTTGGAGGCCCTGAATaGTCCTTCCATTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: PHQCQGLSPQATVCTRRSLGGPE*SFHSSH
Trigger: ATGTGAGGAATGGAAGGAGCATTCAGGGCCTCCAAG...TGATCTTCTGGTGCAAACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp ATCTTCCATGGACATTCTATAAGCTGGGTGTGGTGTGAGTTCAGCTGTCTACTCTCCACGCAGCACGCTTaGTTCCGTCTGGTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: IFHGHSISWVWCEFSCLLSTQHA*FRLVSD
Trigger: ATCACTCACCAGACGGAAGCAAGCGTGCTGCGTGGA...GAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAATGGACATGGGCCTACTaGCCCGGGCAGACGGACGTC +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKWTWAY*PGQTDV
Trigger: GACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTCCA...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFSHSQV*CSASPA
Trigger: GGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACT...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLSHSQV*CSASPA
Trigger: GGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAATTCGGCTTGACCCCATaGCATCTGGCTCCATGTCGT +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQEFGLTP*HLAPCR
Trigger: ACGACATGGAGCCAGATGGCATGGGGTCAAGCCGAA...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAGGCCACATGGGGTTCTaGTGTGTCTGGTACCAAGCC +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLGHMGF*CVWYQA
Trigger: GGCTTGGTACCAGACACAGCAGAACCCCATGTGGCC...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCGGCCACATGGGGTTCTaGTGTGTCTGGTACCAAGCC +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIGHMGF*CVWYQA
Trigger: GGCTTGGTACCAGACACAGCAGAACCCCATGTGGCC...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAACTGGGAGGGTCTTCTTaGACTCTGACTGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQELGGSS*TLTAVG
Trigger: ACCGACTGCAGTCAGAGTGCAAGAAGACCCTCCCAG...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAGTAAGACTCAGAGGCTaGTCCAGGTGTGTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLVRLRG*SRCVRG
Trigger: TCCCCGGACACACCTGGAGCAGCCTCTGAGTCTTAC...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTCAAGCTATAAAGGTGTaGATCGATCAGTCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFQAIKV*IDQSCE
Trigger: TTCACAGGACTGATCGATGCACACCTTTATAGCTTG...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTCACTTGAGAAGCCGTaGACAGCTCCCGAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLSLEKP*TAPELC
Trigger: GCACAACTCGGGAGCTGTGCACGGCTTCTCAAGTGA...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGTCCAGCCTGGATGCGTaGGCGGGGAAGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQSSLDA*AGKGWS
Trigger: ACTCCAGCCCTTCCCCGCGCACGCATCCAGGCTGGA...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGCTCCCCTCAGCGCCTTaGAGCCTTGGCACAGCACGC +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQLPSAP*SLGTAR
Trigger: GCGTGCTGTGCCAAGGCTGCAAGGCGCTGAGGGGAG...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354574.8
ENST00000553118.5
CDS-3UTR GCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCCAGACAAATCCAGGCTaGTCCTTCTGTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSQTNPG*SFCLPF
Trigger: AAATGGCAGACAGAAGGAGCAGCCTGGATTTGTCTG...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354574.8
CDS-3UTR GCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCGCTGAGCCGTCTGTCTaGCATTTGAGGTATTATAAA +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGAEPSV*HLRYYK
Trigger: TTTATAATACCTCAAATGGCAGACAGACGGCTCAGC...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457474.6
CDS-3UTR CCA 90 bp TACTCTTTGGCATCTGGCATTTTAAACACCATTCACCACGTCCATTCTGCGCAGCTCACTTGGGAGATATaGCGCCCTAGACTCCGATGG +
Preference number: 4 (lower is better)
Translates to: YSLASGILNTIHHVHSAQLTWEI*RPRLRW
Trigger: CCATCGGAGTCTAGGGCGCCATATCTCCCAAGTGAG...CTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAATGCCAGATGCCAAAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGCTCACTTGGGAGATATaGCGCCCTAGACTCCGATGG +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKLTWEI*RPRLRW
Trigger: CCATCGGAGTCTAGGGCGCCATATCTCCCAAGTGAG...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTGCACCAGAAGATCACATCTGAAGCAGTGTTaGAGGCCACGGTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PHQCQGLSPQATVCTRRSHLKQC*RPRCVF
Trigger: AAACACACACCGTGGCCTCCAACACTGCTTCAGATG...TGATCTTCTGGTGCAAACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGCATCTGAAGCAGTGTTaGAGGCCACGGTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVREHLKQC*RPRCVF
Trigger: AAACACACACCGTGGCCTCCAACACTGCTTCAGATG...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGCATCTGAAGCAGTGTTaGAGGCCACGGTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWHLKQC*RPRCVF
Trigger: AAACACACACCGTGGCCTCCAACACTGCTTCAGATG...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAAATCTGCCCTGCTTTaGAGGCAACATGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVKSALL*RQHGVG
Trigger: CCCCACTCCATGTTGCCTCCAAAGCAGGGCAGATTT...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGAGCGTGGCAAACTCATaGGCGTTGAACCGAGCTAAC +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLSVANS*ALNRAN
Trigger: GTTAGCTCGGTTCAACGCCCATGAGTTTGCCACGCT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GGTCCTTCCCTTCTGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTGGGTGGACATTCTATAAGCTaGGTGTGGTGTGAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GPSLLVRLHLPWTFYKLGGHSIS*VWCEFS
Trigger: GCTGAACTCACACCACACCCAGCTTATAGAATGTCC...ACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTAGGGTCCTTCCCTTCTaGTGCGCCTTCATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLRVLPF*CAFIFH
Trigger: ATGGAAGATGAAGGCGCACCAGAAGGGAAGGACCCT...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp CCACCCCATTTTAGAGACTGTCACTTGGAGGCCCTGAATGCTCCTTCCATTCCTTCTTTCGGCCAGGGCTaGAATATTTGGCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PPHFRDCHLEALNAPSIPSFGQG*NIWPFS
Trigger: AGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGA...AGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGACAGTCTCTAAAATGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTCTCTTTAAGGAAGAGTaGTTGGAAGTGTCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFLFKEE*LEVSVY
Trigger: GTACACAGACACTTCCAACCACTCTTCCTTAAAGAG...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGTACCAAGCCATCCCCTaGCCACACCATACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVREYQAIP*PHHTSL
Trigger: CAAAGAAGTATGGTGTGGCCAGGGGATGGCTTGGTA...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAGGGTTCTGCTGTGTCTaGTACCAAGCCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLGFCCV*YQAIPW
Trigger: CCAGGGGATGGCTTGGTACCAGACACAGCAGAACCC...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACCAGCTGAACGTCTGTaGGTGAGCCGGGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKPAERL*VSRGPL
Trigger: CAGGGGACCCCGGCTCACCCACAGACGTTCAGCTGG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCATAACACACAGGGTTaGCCGGCTCCATTACGGGTA +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVHNTQG*PAPLRV
Trigger: TACCCGTAATGGAGCCGGCCAACCCTGTGTGTTATG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGTGGCACTTAGGGCTGTaGGACAAACAAGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWWHLGL*DKQVEE
Trigger: CTCTTCCACTTGTTTGTCCCACAGCCCTAAGTGCCA...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCCGTTCCCCTATTTACTaGTGCCCAGGAAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIRSPIY*CPGRIR
Trigger: CCGGATCCTTCCTGGGCATCAGTAAATAGGGGAACG...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTATGAGTACTCAGGATTaGCCGGAAGAAAGGGGACGA +
Preference number: 4 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLMSTQD*PEERGR
Trigger: TCGTCCCCTTTCTTCCGGTCAATCCTGAGTACTCAT...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCAAACTCATGGGCGTTaGACCGAGCTAACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVQTHGR*TELTSV
Trigger: GACAGAAGTTAGCTCGGTTCAACGCCCATGAGTTTG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGCTCCACATTGTCTTTTaGACCCGAGAGAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLLHIVF*TRERTA
Trigger: GGCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAG...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCCTCCACATTGTCTTTTaGACCCGAGAGAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFLHIVF*TRERTA
Trigger: GGCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAG...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTCCATTCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGGAACCAGTTTGCACCTaGTATACATTGGTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: FHSSHAGCSMVLDGLELREPVCT*YTLVVA
Trigger: GGCCACAACCAATGTATATCAGGTGCAAACTGGTTC...CCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGAATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR TCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCCCTGCACATGGTCTCTaGAAGTGTTCAAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSPAHGL*KCSNWL
Trigger: CAACCAATTTGAACACTTTCAGAGACCATGTGCAGG...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACTTCACATGTGTGAATaGCTGCTATGGGACAGAACA +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPLHMCE*LLWDRT
Trigger: TGTTCTGTCCCATAGCAGTCATTCACACATGTGAAG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCATCTTCTTCACATGTGTaGATGACTGCTATGGGACAG +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPSSSHV*MTAMGQ
Trigger: CTGTCCCATAGCAGTCATTCACACATGTGAAGAAGA...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAAGGCAACTTGTACTTTaGTTCTTGTGTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRRQLVL*FLCLLH
Trigger: GTGAAGAAGACACAAGAATCAAAGTACAAGTTGCCT...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGCATCCACACACGGTaGCTTAGTAAAGCAAGCACC +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVSIHTR*LSKAST
Trigger: GGTGCTTGCTTTACTAAGTCACCGTGTGTGGATGCT...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGGTCAGCTAAGGACATaGAGCCTGCAGAAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCGQLRT*SLQKRL
Trigger: TAGCCTTTTCTGCAGGCTTCATGTCCTTAGCTGACC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAAACCGAGCACTCTTCTaGCATATTCTTACAACTGGA +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLNRALF*HILTTG
Trigger: TCCAGTTGTAAGAATATGTCAGAAGAGTGCTCGGTT...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCAGGAGCAGAGAACTCTaGCACCAGATCTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFRSREL*HQISDE
Trigger: CTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCT...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTGCTCATGGGTGCCATTaGGGACAAAAACAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALAHGCH*GQKQAS
Trigger: ACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGC...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCGCTCATGGGTGCCATTaGGGACAAAAACAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLAHGCH*GQKQAS
Trigger: ACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGC...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACAGCGCACACCTCGCTaGTCCGGAGCCGTTTCGACA +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKQRTPR*SGAVST
Trigger: TGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp CCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTGCACCAGAAGATCAGTGCCCTCCTTGCCTTaGATAATCAACGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: PHQCQGLSPQATVCTRRSVPSLP*IINGSF
Trigger: AAAACTCCCGTTGATTATGCAAGGCAAGGAGGGCAC...TGATCTTCTGGTGCAAACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp GGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCAAATTTTCCACGAGGCGCTCTaGCAGCTCATGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GVSSAVYSLTEIVKSDQIFHEAL*QLMVPS
Trigger: GGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGAA...AATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAATTCCACGAGGCGCTCTaGCAGCTCATGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQFHEAL*QLMVPS
Trigger: GGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGAA...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACAACCCGAGAGAGAACTaGCCTGCTGTCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDNPREN*PAVSSW
Trigger: CCAAGAGGAGACAGCAGGGCAGTTCTCTCTCGGGTT...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp ACCACTTTAAAATTTGTCATGGTGGGGCTGGGAAATGTTTGCAGGCAAGCTGTAAACCCGAGAGAGAACTaGCCTGCTGTCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TTLKFVMVGLGNVCRQAVNPREN*PAVSSW
Trigger: CCAAGAGGAGACAGCAGGGCAGTTCTCTCTCGGGTT...TACAGCTTGCCTGCAAACATTTCCCAGCCCCACCATGACAAATTTTAAAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR GCA 90 bp GACATGGGCCTACTGCCCCGGGCAGACGGACGTCTCTTTAAGGAAGAGTGGTTGTACACCAATAGTAGTTaGTCCTCTTCATTAATTAGC +
Preference number: 4 (lower is better)
Translates to: DMGLLPRADGRLFKEEWLYTNSS*SSSLIS
Trigger: GCTAATTAATGAAGAGGAGCAACTACTATTGGTGTA...CAACCACTCTTCCTTAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR GCA 90 bp GAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTGCCACAAGCAACTGTTTaGACCAGAAGATCATTACTT +
Preference number: 4 (lower is better)
Translates to: ELTSSHGCSTQHACFRLVPQATV*TRRSLL
Trigger: AAGTAATGATCTTCTGGTGCAAACAGTTGCTTGTGG...CACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGCACACCATACTTCTTTaGCGTCCCTTTCGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLHTILL*RPFRLD
Trigger: GTCAAGCCGAAAGGGACGGCAAAGAAGTATGGTGTG...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAAAACAGAGGAGGCGGTaGCCTGCCCTTGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLKQRRR*PALVSC
Trigger: ACAACTGACAAGGGCAGGGCACCGCCTCCTCTGTTT...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAACTAACTCAGATGACTaGGATACGATACATCTTTCC +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRTNSDD*DTIHLS
Trigger: GGAAAGATGTATCGTATCGCAGTCATCTGAGTTAGT...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGCACACACAGAATGGCTaGAGTAAGCAGGAACGGGAA +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLHTQNG*SKQERE
Trigger: TTCCCGTTCCTGCTTACTGCAGCCATTCTGTGTGTG...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTCCCCATAGTCTCCTCTaGCCTGCTGCCGTGTACCTG +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLPHSLL*PAAVYL
Trigger: CAGGTACACGGCAGCAGGGCAGAGGAGACTATGGGG...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTACAAGCTATAAAGGTGTaGATCGATCAGTCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLQAIKV*IDQSCE
Trigger: TTCACAGGACTGATCGATGCACACCTTTATAGCTTG...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCAAGCACCGTCGGGGTaGTACTTTCATGACAGCATA +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVQAPSG*YFHDSI
Trigger: TATGCTGTCATGAAAGTAGCACCCCGACGGTGCTTG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTATGAGGCCAAGGAAATaGGCGGGGCACATACAGAGA +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALMRPRK*AGHIQR
Trigger: TCTCTGTATGTGCCCCGCGCATTTCCTTGGCCTCAT...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTTCTGTTCAGTCAAGTaGCAGTTTCATAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFFCSVK*QFHKVH
Trigger: GTGCACTTTATGAAACTGGCACTTGACTGAACAGAA...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTATCAGGTGTGCTGTTCTaGTTCTCCAGCCTGGATGCG +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLSGVLF*FSSLDA
Trigger: CGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGA...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCTTCAGATGCCTCACTTaGGAGATATGGCGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFFRCLT*EIWRPR
Trigger: TCTAGGGCGCCATATCTCCCAAGTGAGGCATCTGAA...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGTTCAGATGCCTCACTTaGGAGATATGGCGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVFRCLT*EIWRPR
Trigger: TCTAGGGCGCCATATCTCCCAAGTGAGGCATCTGAA...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTAAATCTGCCCTGCTTTaGAGGCAACATGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALKSALL*RQHGVG
Trigger: CCCCACTCCATGTTGCCTCCAAAGCAGGGCAGATTT...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGATCCATTTTTGTGATCTaGTTTCCTGCCACAGAGATA +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRSIFVI*FPATEI
Trigger: TATCTCTGTGGCAGGAAACCAGATCACAAAAATGGA...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTACTCTTTAAGGAAGAGTaGTTGGAAGTGTCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLLFKEE*LEVSVY
Trigger: GTACACAGACACTTCCAACCACTCTTCCTTAAAGAG...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAAGGGAGAGTGGGGCTTaGGGCCACATGGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKRESGA*GHMGFC
Trigger: GCAGAACCCCATGTGGCCCCAAGCCCCACTCTCCCT...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTCTTTATCTCATTCCATaGAGCCTTCAAGATGACAAG +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFLYLIP*SLQDDK
Trigger: CTTGTCATCTTGAAGGCTCCATGGAATGAGATAAAG...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACAAAATGAGTTCTaGCTTGTTAGACTGATGCTT +
Preference number: 4 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRAQNEF*LVRLML
Trigger: AAGCATCAGTCTAACAAGCCAGAACTCATTTTGTGC...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTACTCTTTCAGAGCTTTaGGGTAGCAGGCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALTLSEL*GSRQPA
Trigger: AGCTGGCTGCCTGCTACCCCAAAGCTCTGAAAGAGT...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGTGGGGGCTGTGAGCTaGCAGCCTAGAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQVGAVS*QPRGHS
Trigger: GCTGTGTCCTCTAGGCTGCCAGCTCACAGCCCCCAC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGTGGCACTTAGGGCTGTaGGACAAACAAGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLWHLGL*DKQVEE
Trigger: CTCTTCCACTTGTTTGTCCCACAGCCCTAAGTGCCA...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGCATCCAACAGCAATGTaGCACTTAGGGCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKHPTAM*HLGLWD
Trigger: GTCCCACAGCCCTAAGTGCCACATTGCTGTTGGATG...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGACTTGTTTGGAGTTTTaGCACCGTGGGCTAACCGAG +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVTCLEF*HRGLTE
Trigger: CTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTACTGCCCTATCAGCTTTaGGGGAAGGGTGGCATATGG +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLLPYQL*GKGGIW
Trigger: CCATATGCCACCCTTCCCCCAAAGCTGATAGGGCAG...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTTTGTCATGGTGGGGCTaGGAAATGTTTGCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLLSWWG*EMFAGK
Trigger: CTTGCCTGCAAACATTTCCCAGCCCCACCATGACAA...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
3UTR CAA 72 bp GGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTaGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: GAIEDKNRRVLL*VLQLNHLRSRA
Trigger: TGCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CCACCCCATTTTAGAGACTGTCACTTGGAGGCCCTGAATGCTCCTTCCATTCCTACGAACGCTAACATCTaGTACTTGGCTCTGATGAAT +
Preference number: 4 (lower is better)
Translates to: PPHFRDCHLEALNAPSIPTNANI*YLALMN
Trigger: ATTCATCAGAGCCAAGTATCAGATGTTAGCGTTCGT...AGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGACAGTCTCTAAAATGGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACTGCTGTCTGCCATTTaGGGTATTATAAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPLLSAI*GIIKCC
Trigger: ACAGCACTTTATAATACCTCAAATGGCAGACAGCAG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR TCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGCAAACTCATGGGCGTTaGACCGAGCTAACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKQTHGR*TELTSV
Trigger: GACAGAAGTTAGCTCGGTTCAACGCCCATGAGTTTG...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ATCTTCCATGGACATTCTATAAGCTGGGTGTGGTGTGAGTTCAGCTGTCTACTCAAGCTGGGTGTGGTGTaGGTTCAGCTGTCTACTCTT +
Preference number: 4 (lower is better)
Translates to: IFHGHSISWVWCEFSCLLKLGVV*VQLSTL
Trigger: AAGAGTAGACAGCTGAACTCACACCACACCCAGCTT...GAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp GAGATTGTAAAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGTCACTTGGAGGCCCTaGATGCTCCTTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: EIVKSDQIPHQCQGLSPQVTWRP*MLLPFL
Trigger: GAGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGAC...TTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTTTACAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp GACAGCAGACACCATGGAAGCAGCACAAAGATGACTAGGGTTGCTTTGCAAAGCTTGTGGCCTGTTTCCTaGGGTTCGAATTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: DSRHHGSSTKMTRVALQSLWPVS*GSNFHS
Trigger: AGAGTGAAAATTCGAACCTCAGGAAACAGGCCACAA...GCTTTGCAAAGCAACCCTAGTCATCTTTGTGCTGCTTCCATGGTGTCTGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR TCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCGAACCAGTTTGCACCTaGTATACATTGGTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFEPVCT*YTLVVA
Trigger: GGCCACAACCAATGTATATCAGGTGCAAACTGGTTC...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCGAAGGAAGGCAGAGATaGAGAGGAGGTCACAAGTGC +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIEGRQR*RGGHKC
Trigger: GCACTTGTGACCTCCTCTTCATCTCTGCCTTCCTTC...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355312.8
CDS-3UTR TCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGTACGTGTATCCTCTCTaGGCAGGGAATATAACTGTC +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVREYVYPL*AGNITV
Trigger: GACAGTTATATTCCCTGCTCAGAGAGGATACACGTA...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAATGCTGCGTGACCAGCTaGACGTCTGTGGGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYECCVTS*TSVGEP
Trigger: CGGCTCACCCACAGACGTTCAGCTGGTCACGCAGCA...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTCTTTTTGTAGAAATCTaGAGAGTTCTGCGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFLFVEI*RVLRLN
Trigger: ATTCAGACGCAGAACTCTTCAGATTTCTACAAAAAG...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTCCTGACAATGGGTGGTaGTGTGCGTGGAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLPDNGW*CAWSSY
Trigger: GTAGGAGCTCCACGCACATCACCACCCATTGTCAGG...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGAAGCTGACTTTTGGATaGAGGGTACAACACAGTGTC +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVREKLTFG*RVQHSV
Trigger: GACACTGTGTTGTACCCTTCATCCAAAAGTCAGCTT...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGGTCAGAGAAGCAAGCTaGCTTTTGGATGAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVVREAS*LLDEGY
Trigger: GTACCCTTCATCCAAAAGTCAGCTTGCTTCTCTGAC...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCAGGTTTCTTGTCTCTTaGAAAATCAAAGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSRFLVS*KIKAVA
Trigger: GGCCACAGCTTTGATTTTTCAAGAGACAAGAAACCT...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGCTTCACATGTGTGAATaGCTGCTATGGGACAGAACA +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVRELHMCE*LLWDRT
Trigger: TGTTCTGTCCCATAGCAGTCATTCACACATGTGAAG...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCAGCATCCACACACGGTaGCTTAGTAAAGCAAGCACC +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLSIHTR*LSKAST
Trigger: GGTGCTTGCTTTACTAAGTCACCGTGTGTGGATGCT...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTAGGAGCAGAGAACTCTaGCACCAGATCTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALRSREL*HQISDE
Trigger: CTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCT...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAATTGAGAATACAGGGTaGAAAAGAACGACGTTACTG +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLIENTG*KRTTLL
Trigger: CAGTAACGTCGTTCTTTTTCACCCTGTATTCTCAAT...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCGTGCGTTTAGAATTCTaGTTACATGAAATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGVRLEF*LHEMLC
Trigger: ACACAGCATTTCATGTAATCAGAATTCTAAACGCAC...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCGTACAGAATAATGAGTaGCAGGGATCAAACACGTTG +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSVQNNE*QGSNTL
Trigger: CAACGTGTTTGATCCCTGTCACTCATTATTCTGTAC...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTGCACCAGAAGATCATGTAAAGGCCAAAAATaGCAGCAGACACCATGGAAG +
Preference number: 4 (lower is better)
Translates to: PHQCQGLSPQATVCTRRSCKGQK*QQTPWK
Trigger: CTTCCATGGTGTCTGCTGTCATTTTTGGCCTTTACA...TGATCTTCTGGTGCAAACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCGCACACCTCGCTaGTCCGGAGCCGTTTCGACA +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNQRTPR*SGAVST
Trigger: TGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTG...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGGGTGTGTGTTTCAGATaGCTCACTTGGGAGATATGG +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLGVCFR*LTWEIW
Trigger: CCATATCTCCCAAGTGAGGCATCTGAAACACACACC...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGGTGTGTGTTTCAGATaGCTCACTTGGGAGATATGG +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCGVCFR*LTWEIW
Trigger: CCATATCTCCCAAGTGAGGCATCTGAAACACACACC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGTGCCCTCCTTGCCTTaGATAATCAACGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCVPSLP*IINGSF
Trigger: AAAACTCCCGTTGATTATGCAAGGCAAGGAGGGCAC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACTTCCACGAGGCGCTCTaGCAGCTCATGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNFHEAL*QLMVPS
Trigger: GGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGAA...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGCAGACAAATCCAGGCTaGTGTCTGCCATTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLQTNPG*CLPFEV
Trigger: TACCTCAAATGGCAGACAGCAGCCTGGATTTGTCTG...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR GCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACGTGGCAAGCCAGACTaGATCCGTCTCTCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKRGKPD*IRLSPV
Trigger: GACAGGCGAGAGACGGATGCAGTCTGGCTTGCCACG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGCGTGGCAAGCCAGACTaGATCCGTCTCTCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQRGKPD*IRLSPV
Trigger: GACAGGCGAGAGACGGATGCAGTCTGGCTTGCCACG...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCCCGGTTTGTTTTGCTTaGAGTGGTTTCCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSPVCFA*SGFQIC
Trigger: ACAGATTTGGAAACCACTGCAAGCAAAACAAACCGG...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLSHSQV*CSASPA
Trigger: GGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACT...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCACACCATACTTCTTTaGCGTCCCTTTCGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALHTILL*RPFRLD
Trigger: GTCAAGCCGAAAGGGACGGCAAAGAAGTATGGTGTG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCAGGAAATTCACTTATTaGACGATGCTTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSRKFTY*TMLGRE
Trigger: TTCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCT...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCCAAGCTATAAAGGTGTaGATCGATCAGTCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSQAIKV*IDQSCE
Trigger: TTCACAGGACTGATCGATGCACACCTTTATAGCTTG...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCAAGCACCGTCGGGGTaGTACTTTCATGACAGCATA +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALQAPSG*YFHDSI
Trigger: TATGCTGTCATGAAAGTAGCACCCCGACGGTGCTTG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGCCAGTTTCATAAAGTaGACCTCTGCCCTATCAGCT +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCASFIK*TSALSA
Trigger: AGCTGATAGGGCAGAGGTGCACTTTATGAAACTGGC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTCAAATAAGAACTATTTaGATTCCAAGGCAGATGACG +
Preference number: 4 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFQIRTI*IPRQMT
Trigger: CGTCATCTGCCTTGGAATGCAAATAGTTCTTATTTG...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTGGGCTGGGAAATGTTTaGAGGCAAGCTGTACACTGG +
Preference number: 4 (lower is better)
Translates to: KSDQIPHQCQGLSPQATVGLGNV*RQAVHW
Trigger: CCAGTGTACAGCTTGCCTGCAAACATTTCCCAGCCC...AACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAACATCTGAAGCAGTGTTaGAGGCCACGGTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQEHLKQC*RPRCVF
Trigger: AAACACACACCGTGGCCTCCAACACTGCTTCAGATG...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATCTTCCATGGACATTCTATAAGCTGGGTGTGGTGTGAGTTCAGCTGTCTACTCCATCTGAAGCAGTGTTaGAGGCCACGGTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: IFHGHSISWVWCEFSCLLHLKQC*RPRCVF
Trigger: AAACACACACCGTGGCCTCCAACACTGCTTCAGATG...GAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCATCTGAAGCAGTGTTaGAGGCCACGGTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALHLKQC*RPRCVF
Trigger: AAACACACACCGTGGCCTCCAACACTGCTTCAGATG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp TTCCATTCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGGTTCTCACGCTCGAATaGAGTTGCTTGCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: FHSSHAGCSMVLDGLELRVLTLE*SCLLRS
Trigger: AGATCTTAGCAAGCAACTCCATTCGAGCGTGAGAAC...CCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGAATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTACAGGATGAAAGAAGTTaGCTTGTGCTCCTAAAGATA +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLQDERS*LVLLKI
Trigger: TATCTTTAGGAGCACAAGCCAACTTCTTTCATCCTG...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGGCTTTGGAGGCAACATaGAGTGGGGTGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLALEAT*SGVFPF
Trigger: AAAAGGAAACACCCCACTCCATGTTGCCTCCAAAGC...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTGCTTTGGAGGCAACATaGAGTGGGGTGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLALEAT*SGVFPF
Trigger: AAAAGGAAACACCCCACTCCATGTTGCCTCCAAAGC...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCAAATCTGCCCTGCTTTaGAGGCAACATGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIKSALL*RQHGVG
Trigger: CCCCACTCCATGTTGCCTCCAAAGCAGGGCAGATTT...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACAAATCTGCCCTGCTTTaGAGGCAACATGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDKSALL*RQHGVG
Trigger: CCCCACTCCATGTTGCCTCCAAAGCAGGGCAGATTT...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp GGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCAAATTCGCTCTGCCAGCTCATaGTGCCCTCCTTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GVSSAVYSLTEIVKSDQIRSASS*CPPCLA
Trigger: TGCAAGGCAAGGAGGGCACCATGAGCTGGCAGAGCG...AATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAACGCTCTGCCAGCTCATaGTGCCCTCCTTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQRSASS*CPPCLA
Trigger: TGCAAGGCAAGGAGGGCACCATGAGCTGGCAGAGCG...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTATCCATTTTTGTGATCTaGTTTCCTGCCACAGAGATA +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLSIFVI*FPATEI
Trigger: TATCTCTGTGGCAGGAAACCAGATCACAAAAATGGA...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTGCATCGTACACATCCATaGCAAGTTCTTCAAACAAAT +
Preference number: 4 (lower is better)
Translates to: ELTSSHGCSTQHACFRLVHRTHP*QVLQTN
Trigger: ATTTGTTTGAAGAACTTGCCATGGATGTGTACGATG...CACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCAGCGTGGCAAACTCATaGGCGTTGAACCGAGCTAAC +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYISVANS*ALNRAN
Trigger: GTTAGCTCGGTTCAACGCCCATGAGTTTGCCACGCT...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTTTAAGGAAGAGTGGTTaGAAGTGTCTGTGTACTCAG +
Preference number: 4 (lower is better)
Translates to: SMELTSSHGCSTQHACFRLRKSG*KCLCTQ
Trigger: CTGAGTACACAGACACTTCCAACCACTCTTCCTTAA...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTATCCGGTCTCGTACATaGACATGGGCCTACTGCCCC +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLIRSRT*TWAYCP
Trigger: GGGGCAGTAGGCCCATGTCCATGTACGAGACCGGAT...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAATGCGCGGGGAAGGGCTaGAGTCTCATCCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQCAGKG*SLILLS
Trigger: AGAGAGCAGGATGAGACTCCAGCCCTTCCCCGCGCA...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTTACCAAGCCATCCCCTaGCCACACCATACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALYQAIP*PHHTSL
Trigger: CAAAGAAGTATGGTGTGGCCAGGGGATGGCTTGGTA...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAGGGCTTGGGGCCACATaGGGTTCTGCTGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQGLGAT*GSAVSG
Trigger: ACCAGACACAGCAGAACCCCATGTGGCCCCAAGCCC...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAACTCTTTCAGAGCTTTaGGGTAGCAGGCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLTLSEL*GSRQPA
Trigger: AGCTGGCTGCCTGCTACCCCAAAGCTCTGAAAGAGT...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGTGGGGGCTGTGAGCTaGCAGCCTAGAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNVGAVS*QPRGHS
Trigger: GCTGTGTCCTCTAGGCTGCCAGCTCACAGCCCCCAC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAGTGGGGGCTGTGAGCTaGCAGCCTAGAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEVGAVS*QPRGHS
Trigger: GCTGTGTCCTCTAGGCTGCCAGCTCACAGCCCCCAC...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCTTTCATGACAGCATATaGTCAAGCTATAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGFHDSI*SSYKGV
Trigger: CACACCTTTATAGCTTGACCATATGCTGTCATGAAA...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAGCTGTGTTTGATCTTTaGGCCCAATTCACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPAVFDL*AQFTVL
Trigger: AAGAACAGTGAATTGGGCCCAAAGATCAAACACAGC...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAATCTGCTTCTCCAGCCTaGATGCGTGCGCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYESASPA*MRARGR
Trigger: CCTTCCCCGCGCACGCATCCAGGCTGGAGAAGCAGA...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGACGAACGCTAACATCTaGTACTTGGCTCTGATGAAT +
Preference number: 4 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVTNANI*YLALMN
Trigger: ATTCATCAGAGCCAAGTATCAGATGTTAGCGTTCGT...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGACGAACGCTAACATCTaGTACTTGGCTCTGATGAAT +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWTNANI*YLALMN
Trigger: ATTCATCAGAGCCAAGTATCAGATGTTAGCGTTCGT...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAATGCTGTCCATTTTTGTaGTCTGGTTTCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQECCPFL*SGFLPQ
Trigger: CTGTGGCAGGAAACCAGATCACAAAAATGGACAGCA...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTTGCTGTCCATTTTTGTaGTCTGGTTTCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALCCPFL*SGFLPQ
Trigger: CTGTGGCAGGAAACCAGATCACAAAAATGGACAGCA...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp TTCCATTCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGAGAGATTGTAAAATCTaGCCAAATTCCCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: FHSSHAGCSMVLDGLELRRDCKI*PNSPPV
Trigger: CACTGGTGGGGAATTTGGTCAGATTTTACAATCTCT...CCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGTTGTGGCCTGTTTCCTaGGGTTCGAATTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVLWPVS*GSNFHS
Trigger: AGAGTGAAAATTCGAACCTCAGGAAACAGGCCACAA...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGTTGTGGCCTGTTTCCTaGGGTTCGAATTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLLWPVS*GSNFHS
Trigger: AGAGTGAAAATTCGAACCTCAGGAAACAGGCCACAA...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCGAACCAGTTTGCACCTaGTATACATTGGTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLEPVCT*YTLVVA
Trigger: GGCCACAACCAATGTATATCAGGTGCAAACTGGTTC...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAACCTGACAATGGGTGGTaGTGTGCGTGGAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQPDNGW*CAWSSY
Trigger: GTAGGAGCTCCACGCACATCACCACCCATTGTCAGG...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCCTTTGCTGCAGGTTTTaGACAAACTGTCTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCLCCRF*TNCLAY
Trigger: GTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAG...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAAGTCAGAGAAGCAAGCTaGCTTTTGGATGAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQEVREAS*LLDEGY
Trigger: GTACCCTTCATCCAAAAGTCAGCTTGCTTCTCTGAC...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGAGGTTTCTTGTCTCTTaGAAAATCAAAGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVRERFLVS*KIKAVA
Trigger: GGCCACAGCTTTGATTTTTCAAGAGACAAGAAACCT...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCGGGGTGCTACTTTCATaGCAGCATATGGTCAAGCTA +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLGVLLS*QHMVKL
Trigger: TAGCTTGACCATATGCTGTCATGAAAGTAGCACCCC...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCCCATGCTACTCACAGTaGAGCAAAATGCGACAAAAG +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCPCYSQ*SKMRQK
Trigger: CTTTTGTCGCATTTTGCTTCACTGTGAGTAGCATGG...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAATCACTCTGGAGTGTTTaGAGCTTCTGCCGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQESLWSV*SFCRFV
Trigger: AACAAACCGGCAGAAGCTTCAAACACTCCAGAGTGA...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354574.8
ENST00000457474.6
CDS-3UTR TCA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGTTCTTCTGGATTGGGTaGAACACAATCAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVFFWIG*NTINSL
Trigger: AAGGGAGTTGATTGTGTTTCACCCAATCCAGAAGAA...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR GCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGGACTCCGATGGACACTaGAGCACTCATCACATAAAA +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVDSDGH*STHHIK
Trigger: TTTTATGTGATGAGTGCTGCAGTGTCCATCGGAGTC...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATCTTCCATGGACATTCTATAAGCTGGGTGTGGTGTGAGTTCAGCTGTCTACTCTCAGCCTGTAAAATCTaGCCTGCTTTGGAGGCAACA +
Preference number: 4 (lower is better)
Translates to: IFHGHSISWVWCEFSCLLSACKI*PALEAT
Trigger: TGTTGCCTCCAAAGCAGGGCAGATTTTACAGGCTGA...GAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTTCAGCCTGTAAAATCTaGCCTGCTTTGGAGGCAACA +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALSACKI*PALEAT
Trigger: TGTTGCCTCCAAAGCAGGGCAGATTTTACAGGCTGA...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTGTGCCCTCCTTGCCTTaGATAATCAACGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALVPSLP*IINGSF
Trigger: AAAACTCCCGTTGATTATGCAAGGCAAGGAGGGCAC...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp ATCTTCCATGGACATTCTATAAGCTGGGTGTGGTGTGAGTTCAGCTGTCTACTCCAGACAAATCCAGGCTaGTGTCTGCCATTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: IFHGHSISWVWCEFSCLLQTNPG*CLPFEV
Trigger: TACCTCAAATGGCAGACAGCAGCCTGGATTTGTCTG...GAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCCTTCTTAGCAGCTTTTaGCAATTCAGACAAATCCAG +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSLLSSF*QFRQIQ
Trigger: CTGGATTTGTCTGAATTGGCAAAAGCTGCTAAGAAG...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGCCGGTTTGTTTTGCTTaGAGTGGTTTCCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWPVCFA*SGFQIC
Trigger: ACAGATTTGGAAACCACTGCAAGCAAAACAAACCGG...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCCGGTTTGTTTTGCTTaGAGTGGTTTCCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVPVCFA*SGFQIC
Trigger: ACAGATTTGGAAACCACTGCAAGCAAAACAAACCGG...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp CCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTGCACCAGAAGATCATCTGCCGGTTTGTTTTaGTTGCAGTGGTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: PHQCQGLSPQATVCTRRSSAGLF*LQWFPN
Trigger: ATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGA...TGATCTTCTGGTGCAAACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp GGTCCTTCCCTTCTGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTGGGTCCACAAGCAACTGTTTaGACCAGAAGATCATTACTT +
Preference number: 4 (lower is better)
Translates to: GPSLLVRLHLPWTFYKLGPQATV*TRRSLL
Trigger: AAGTAATGATCTTCTGGTGCAAACAGTTGCTTGTGG...ACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp GAGATTGTAAAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAACTTCCATTCCTCACATaGAGGCTGCTCCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: EIVKSDQIPHQCQGLSPQLPFLT*RLLHGA
Trigger: AGCACCATGGAGCAGCCTGCATGTGAGGAATGGAAG...TTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTTTACAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTTCAGGTGTGCTGTTCTaGTTCTCCAGCCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLSGVLF*FSSLDA
Trigger: GGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGA...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355312.8
CDS-3UTR GCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAGAGGAGGCGGTGCCCTaGCCTTGTCAGTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKEEAVP*PCQLLF
Trigger: GAACAACAACTGACAAGGGCAGGGCACCGCCTCCTC...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAACCCCATAGTCTCCTCTaGCCTGCTGCCGTGTACCTG +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEPHSLL*PAAVYL
Trigger: CAGGTACACGGCAGCAGGGCAGAGGAGACTATGGGG...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGTAAGACTCAGAGGCTaGTCCAGGTGTGTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQVRLRG*SRCVRG
Trigger: TCCCCGGACACACCTGGAGCAGCCTCTGAGTCTTAC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTCCAAGGAAAACACTaGTTCACCTCCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLFQGKH*FTSCRQ
Trigger: CTGTCTGCAGGAGGTGAAGCAGTGTTTTCCTTGGAA...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGAATGTTCAGATAAGGTaGGATTTGCCAACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVRENVQIR*DLPTGA
Trigger: TGCTCCTGTTGGCAAATCGCACCTTATCTGAACATT...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCGTAGAGCCTGTTTATTaGATAACTAGCAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSVEPVY*ITSRHK
Trigger: TTTGTGCCTGCTAGTTATGCAATAAACAGGCTCTAC...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTTCAGATGCCTCACTTaGGAGATATGGCGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: KSDQIPHQCQGLSPQATVFRCLT*EIWRPR
Trigger: TCTAGGGCGCCATATCTCCCAAGTGAGGCATCTGAA...AACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGTTCTCACGCTCGAATaGAGTTGCTTGCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCVLTLE*SCLLRS
Trigger: AGATCTTAGCAAGCAACTCCATTCGAGCGTGAGAAC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GGTCCTTCCCTTCTGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTGGGTCAGGATGAAAGAAGTTaGCTTGTGCTCCTAAAGATA +
Preference number: 4 (lower is better)
Translates to: GPSLLVRLHLPWTFYKLGQDERS*LVLLKI
Trigger: TATCTTTAGGAGCACAAGCCAACTTCTTTCATCCTG...ACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCGGAGGCAACATGGAGTaGGGTGTTTCCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIGGNME*GVSFFR
Trigger: CCTGAAAAAGGAAACACCCCACTCCATGTTGCCTCC...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TACTCTTTGGCATCTGGCATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGCTTTGGAGGCAACATaGAGTGGGGTGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: YSLASGILNTIHHVHSAQALEAT*SGVFPF
Trigger: AAAAGGAAACACCCCACTCCATGTTGCCTCCAAAGC...CTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAATGCCAGATGCCAAAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCGCTTTGGAGGCAACATaGAGTGGGGTGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLALEAT*SGVFPF
Trigger: AAAAGGAAACACCCCACTCCATGTTGCCTCCAAAGC...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTGCTTTGGAGGCAACATaGAGTGGGGTGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALALEAT*SGVFPF
Trigger: AAAAGGAAACACCCCACTCCATGTTGCCTCCAAAGC...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACAGAATCCTGTGTGCCTaGGTCTGCTCCATATACTGC +
Preference number: 4 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDRILCA*VCSIYC
Trigger: GCAGTATATGGAGCAGACCCAGGCACACAGGATTCT...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTACATCGTACACATCCATaGCAAGTTCTTCAAACAAAT +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLHRTHP*QVLQTN
Trigger: ATTTGTTTGAAGAACTTGCCATGGATGTGTACGATG...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCAAATTGTTACCAGGGCGCTGTaGTTTTGCGTGGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GVSSAVYSLTEIVKSDQIVTRAL*FCVASQ
Trigger: CTGGCTTGCCACGCAAAACCACAGCGCCCTGGTAAC...AATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGTTACCAGGGCGCTGTaGTTTTGCGTGGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQVTRAL*FCVASQ
Trigger: CTGGCTTGCCACGCAAAACCACAGCGCCCTGGTAAC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATCCGGTCTCGTACATaGACATGGGCCTACTGCCCC +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQIRSRT*TWAYCP
Trigger: GGGGCAGTAGGCCCATGTCCATGTACGAGACCGGAT...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAGCTCGCTTCTCCCATTaGGAGATATGGTTTCTGACC +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLARFSH*EIWFLT
Trigger: GGTCAGAAACCATATCTCCCAATGGGAGAAGCGAGC...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGGGTTCTGCTGTGTCTaGTACCAAGCCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQGFCCV*YQAIPW
Trigger: CCAGGGGATGGCTTGGTACCAGACACAGCAGAACCC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCTTATTGCACGATGCTTaGCAGGGAACAAATGACGCT +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFLLHDA*QGTNDA
Trigger: AGCGTCATTTGTTCCCTGCCAAGCATCGTGCAATAA...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCGAAAAGGCTATCAGATaGCGCCTGAACTTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLEKAIR*RLNLRW
Trigger: CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTC...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCACTTGTTTGGAGTTTTaGCACCGTGGGCTAACCGAG +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYITCLEF*HRGLTE
Trigger: CTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGGCTGTGTTTGATCTTTaGGCCCAATTCACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVREAVFDL*AQFTVL
Trigger: AAGAACAGTGAATTGGGCCCAAAGATCAAACACAGC...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAAGAAAACTATACTATTaGAAAGCTCATGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLRKLYY*KAHGCH
Trigger: ATGGCACCCATGAGCTTTCCAATAGTATAGTTTTCT...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 72 bp AAGGTGGCTGGAACAAATGTTCAGATAAGGTGCGATTaGCCAACAGGAGCAGAGAACTCTGACACCAGATCT +
Preference number: 4 (lower is better)
Translates to: KVAGTNVQIRCD*PTGAENSDTRS
Trigger: AGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCACCTTATCTGAACATTTGTTCCAGCCACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 72 bp CTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTaGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LMGAIEDKNRRV*LLVLQLNHLRS
Trigger: GCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTGCTGTCCATTTTTGTaGTCTGGTTTCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: KSDQIPHQCQGLSPQATVCCPFL*SGFLPQ
Trigger: CTGTGGCAGGAAACCAGATCACAAAAATGGACAGCA...AACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp ACCACTTTAAAATTTGTCATGGTGGGGCTGGGAAATGTTTGCAGGCAAGCTGTATGCTGTCCATTTTTGTaGTCTGGTTTCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: TTLKFVMVGLGNVCRQAVCCPFL*SGFLPQ
Trigger: CTGTGGCAGGAAACCAGATCACAAAAATGGACAGCA...TACAGCTTGCCTGCAAACATTTCCCAGCCCCACCATGACAAATTTTAAAGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR TCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCCTGCTGTCTGCCATTTaGGGTATTATAAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFLLSAI*GIIKCC
Trigger: ACAGCACTTTATAATACCTCAAATGGCAGACAGCAG...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR TCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAGAACCAGTTTGCACCTaGTATACATTGGTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLEPVCT*YTLVVA
Trigger: GGCCACAACCAATGTATATCAGGTGCAAACTGGTTC...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAATACGTGTATCCTCTCTaGGCAGGGAATATAACTGTC +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQEYVYPL*AGNITV
Trigger: GACAGTTATATTCCCTGCTCAGAGAGGATACACGTA...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTTACGTGTATCCTCTCTaGGCAGGGAATATAACTGTC +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALYVYPL*AGNITV
Trigger: GACAGTTATATTCCCTGCTCAGAGAGGATACACGTA...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCACTTTTGGATGTATGTaGTCAACTCAACAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSTFGCM*STQQLL
Trigger: CAACAACTGTTGAGTTGATCACATACATCCAAAAGT...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAAACAGGGTAAAACACTaGGAAGAAATGAACCAATTC +
Preference number: 4 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPNRVKH*EEMNQF
Trigger: GAATTGGTTCATTTCTTCTCAGTGTTTTACCCTGTT...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTGTGGAGCTCCTACCCTaGACATGGCTTCATGAGATG +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLVELLP*TWLHEM
Trigger: CATCTCATGAAGCCATGTTCAGGGTAGGAGCTCCAC...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTATCTGGCTTGTTAGACTaGTGCTTCTCTTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLSGLLD*CFSLLQ
Trigger: CTGCAGCAAAGAGAAGCATCAGTCTAACAAGCCAGA...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCCATGCTACTCACAGTaGAGCAAAATGCGACAAAAG +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALPCYSQ*SKMRQK
Trigger: CTTTTGTCGCATTTTGCTTCACTGTGAGTAGCATGG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAACACCAGATCTCAGATaGGGCCAAGGAAATGCGCGG +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKTPDLR*GQGNAR
Trigger: CCGCGCATTTCCTTGGCCTCATCTGAGATCTGGTGT...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAACACCAGATCTCAGATaGGGCCAAGGAAATGCGCGG +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQTPDLR*GQGNAR
Trigger: CCGCGCATTTCCTTGGCCTCATCTGAGATCTGGTGT...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGATGAAATGCTGTGTTTaGTCTTTGGGCCCAATTCAC +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVMKCCV*SLGPIH
Trigger: GTGAATTGGGCCCAAAGATCAAACACAGCATTTCAT...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCCGTCTGTCTGCCATTTaGGGTATTATAAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFRLSAI*GIIKCC
Trigger: ACAGCACTTTATAATACCTCAAATGGCAGACAGACG...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457474.6
CDS-3UTR TCA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCAGAAGTTCAGCTTGTaGAAAATCAGATCGCCTATT +
Preference number: 4 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVQKFSL*KIRSPI
Trigger: AATAGGCGATCTGATTTTTCACAAGCTGAACTTCTG...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR GCA 90 bp AAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTCAGCCTGTAAAATCTaGCCTGCTTTGGAGGCAACA +
Preference number: 4 (lower is better)
Translates to: KSDQIPHQCQGLSPQATVSACKI*PALEAT
Trigger: TGTTGCCTCCAAAGCAGGGCAGATTTTACAGGCTGA...AACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAGTGCCCTCCTTGCCTTaGATAATCAACGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLVPSLP*IINGSF
Trigger: AAAACTCCCGTTGATTATGCAAGGCAAGGAGGGCAC...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTGTGCCCTCCTTGCCTTaGATAATCAACGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: KSDQIPHQCQGLSPQATVVPSLP*IINGSF
Trigger: AAAACTCCCGTTGATTATGCAAGGCAAGGAGGGCAC...AACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGGAGCTAACTTCTGTCTaGCCTGATTTCGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKELTSV*PDFVLM
Trigger: CATCAACACGAAATCAGGGCAGACAGAAGTTAGCTC...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAGAGAGAGAACTGCCCTaGTGTCTCCTCTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQERELP*CLLLAS
Trigger: TGACGCCAAGAGGAGACAGCAGGGCAGTTCTCTCTC...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAAACCCGAGAGAGAACTaGCCTGCTGTCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQNPREN*PAVSSW
Trigger: CCAAGAGGAGACAGCAGGGCAGTTCTCTCTCGGGTT...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCCCGGTTTGTTTTGCTTaGAGTGGTTTCCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCPVCFA*SGFQIC
Trigger: ACAGATTTGGAAACCACTGCAAGCAAAACAAACCGG...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTTCTGCCGGTTTGTTTTaGTTGCAGTGGTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLSAGLF*LQWFPN
Trigger: ATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGA...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGTCTGCCGGTTTGTTTTaGTTGCAGTGGTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLSAGLF*LQWFPN
Trigger: ATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGA...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTGAATCTAGGCTCTTCTaGCGGTTTGTTTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALESRLF*RFVLLA
Trigger: TGCAAGCAAAACAAACCGGCAGAAGAGCCTAGATTC...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000553118.5
CDS-3UTR GCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAATTCGGCTTGACCCCATaGCATCTGGCTCCATGTCGT +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKFGLTP*HLAPCR
Trigger: ACGACATGGAGCCAGATGGCATGGGGTCAAGCCGAA...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACTGGGAGGGTCTTCTTaGACTCTGACTGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKLGGSS*TLTAVG
Trigger: ACCGACTGCAGTCAGAGTGCAAGAAGACCCTCCCAG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACAGAGGAGGCGGTaGCCTGCCCTTGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQKQRRR*PALVSC
Trigger: ACAACTGACAAGGGCAGGGCACCGCCTCCTCTGTTT...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGAGGAAATTCACTTATTaGACGATGCTTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLRKFTY*TMLGRE
Trigger: TTCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGTAAGACTCAGAGGCTaGTCCAGGTGTGTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNVRLRG*SRCVRG
Trigger: TCCCCGGACACACCTGGAGCAGCCTCTGAGTCTTAC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGTCTTACAACTGGAAATaGTTTGTTGGTCCCCATGTT +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWSYNWK*FVGPHV
Trigger: AACATGGGGACCAACAAAGCATTTCCAGTTGTAAGA...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTATGAGGCCAAGGAAATaGGCGGGGCACATACAGAGA +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLMRPRK*AGHIQR
Trigger: TCTCTGTATGTGCCCCGCGCATTTCCTTGGCCTCAT...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAATCACTTGAGAAGCCGTaGACAGCTCCCGAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKSLEKP*TAPELC
Trigger: GCACAACTCGGGAGCTGTGCACGGCTTCTCAAGTGA...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCAAATTCTCACTTGGGAGATATaGCGCCCTAGACTCCGATGG +
Preference number: 4 (lower is better)
Translates to: GVSSAVYSLTEIVKSDQILTWEI*RPRLRW
Trigger: CCATCGGAGTCTAGGGCGCCATATCTCCCAAGTGAG...AATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAACTCACTTGGGAGATATaGCGCCCTAGACTCCGATGG +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQLTWEI*RPRLRW
Trigger: CCATCGGAGTCTAGGGCGCCATATCTCCCAAGTGAG...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGGTTCTCACGCTCGAATaGAGTTGCTTGCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKVLTLE*SCLLRS
Trigger: AGATCTTAGCAAGCAACTCCATTCGAGCGTGAGAAC...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTGTTCTCACGCTCGAATaGAGTTGCTTGCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALVLTLE*SCLLRS
Trigger: AGATCTTAGCAAGCAACTCCATTCGAGCGTGAGAAC...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCAGGATGAAAGAAGTTaGCTTGTGCTCCTAAAGATA +
Preference number: 4 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVQDERS*LVLLKI
Trigger: TATCTTTAGGAGCACAAGCCAACTTCTTTCATCCTG...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGTCCATTTTTGTGATCTaGTTTCCTGCCACAGAGATA +
Preference number: 4 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVSIFVI*FPATEI
Trigger: TATCTCTGTGGCAGGAAACCAGATCACAAAAATGGA...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGTTACCAGGGCGCTGTaGTTTTGCGTGGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNVTRAL*FCVASQ
Trigger: CTGGCTTGCCACGCAAAACCACAGCGCCCTGGTAAC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCTCTCAACGCTGTGCTaGTTATTGATGGTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVLSTLC*LLMVFS
Trigger: ACTGAAAACCATCAATAACCAGCACAGCGTTGAGAG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATCTTCCATGGACATTCTATAAGCTGGGTGTGGTGTGAGTTCAGCTGTCTACTCTCTATAAGCTGGGTGTaGTGTGAGTTCAGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: IFHGHSISWVWCEFSCLLSISWV*CEFSCL
Trigger: TAGACAGCTGAACTCACACCACACCCAGCTTATAGA...GAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp CTAGCCGGGCTGAAAGTAAAAAGCCAATACAAACAAGGACCCTTTCTTCTGGATTCTTTCGGCCAGGGCTaGAATATTTGGCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LAGLKVKSQYKQGPFLLDSFGQG*NIWPFS
Trigger: AGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGA...ATCCAGAAGAAAGGGTCCTTGTTTGTATTGGCTTTTTACTTTCAGCCCGGCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTATTAGCTGCTGTATCTTaGCCTCAGAAGCCACTAGAG +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLLAAVS*PQKPLE
Trigger: CTCTAGTGGCTTCTGAGGCCAAGATACAGCAGCTAA...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR CCA 90 bp ACCACTTTAAAATTTGTCATGGTGGGGCTGGGAAATGTTTGCAGGCAAGCTGTATTAGCTGCTGTATCTTaGCCTCAGAAGCCACTAGAG +
Preference number: 4 (lower is better)
Translates to: TTLKFVMVGLGNVCRQAVLAAVS*PQKPLE
Trigger: CTCTAGTGGCTTCTGAGGCCAAGATACAGCAGCTAA...TACAGCTTGCCTGCAAACATTTCCCAGCCCCACCATGACAAATTTTAAAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAGCAGTCGGTAGGCACTaGACGTCAGTAAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQAVGRH*TSVNEG
Trigger: CCCTTCGTTTACTGACGTCCAGTGCCTACCGACTGC...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGCAGTCGGTAGGCACTaGACGTCAGTAAACGAAGGG +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQAVGRH*TSVNEG
Trigger: CCCTTCGTTTACTGACGTCCAGTGCCTACCGACTGC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGATGTCGTACGCACACTaGATGACCTGCTGCGTGACC +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQMSYAH*MTCCVT
Trigger: GGTCACGCAGCAGGTCATCCAGTGTGCGTACGACAT...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTATTTGAACAAACTGTCTaGCTTACAGGGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLFEQTV*LTGVRE
Trigger: CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAA...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGCACAAAATGAGTTCTaGCTTGTTAGACTGATGCTT +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWAQNEF*LVRLML
Trigger: AAGCATCAGTCTAACAAGCCAGAACTCATTTTGTGC...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGGTAGTGATACCTAAATaGGTGGCACAAAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVREVVIPK*VAQNEF
Trigger: GAACTCATTTTGTGCCACCCATTTAGGTATCACTAC...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTGTGGGACAAACAAGTaGAAGAGTCTTTTGGAGACG +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLCGTNK*KSLLET
Trigger: CGTCTCCAAAAGACTCTTCCACTTGTTTGTCCCACA...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGCTGGAAATGCTTTGTTaGTCCCCATGTTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKLEMLC*SPCSLT
Trigger: AGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCTGGAAATGCTTTGTTaGTCCCCATGTTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALLEMLC*SPCSLT
Trigger: AGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGGAGTTTTGGCACCGTaGGCTAACCGAGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQGVLAP*ANRALF
Trigger: GAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGGCTGTGTTTGATCTTTaGGCCCAATTCACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVAVFDL*AQFTVL
Trigger: AAGAACAGTGAATTGGGCCCAAAGATCAAACACAGC...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGGCTGTGTTTGATCTTTaGGCCCAATTCACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLAVFDL*AQFTVL
Trigger: AAGAACAGTGAATTGGGCCCAAAGATCAAACACAGC...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAAAGGTCTCAACCATCTaGAGCAGTGTTGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKKVSTI*SSVGGH
Trigger: GTGGCCTCCAACACTGCTTCAGATGGTTGAGACCTT...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCACGAACGCTAACATCTaGTACTTGGCTCTGATGAAT +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLTNANI*YLALMN
Trigger: ATTCATCAGAGCCAAGTATCAGATGTTAGCGTTCGT...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ATCTTCCATGGACATTCTATAAGCTGGGTGTGGTGTGAGTTCAGCTGTCTACTCCTGCTGTCTGCCATTTaGGGTATTATAAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: IFHGHSISWVWCEFSCLLLLSAI*GIIKCC
Trigger: ACAGCACTTTATAATACCTCAAATGGCAGACAGCAG...GAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTATTGATCTATGGAATTaGCATCTTCGCATGGATGCT +
Preference number: 4 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLIDLWN*HLRMDA
Trigger: AGCATCCATGCGAAGATGTCAATTCCATAGATCAAT...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGGGAGATATGGTTTCTaGCCTGATCCGGTCTCGTAC +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQGRYGF*PDPVSY
Trigger: GTACGAGACCGGATCAGGTCAGAAACCATATCTCCC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGGTCTTCTTGCACTCTaGCTGCAGTCGGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNGLLAL*LQSVGT
Trigger: AGTGCCTACCGACTGCAGTCAGAGTGCAAGAAGACC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGCTTTTTGTAGAAATCTaGAGAGTTCTGCGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVRELFVEI*RVLRLN
Trigger: ATTCAGACGCAGAACTCTTCAGATTTCTACAAAAAG...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCCTTCACATGTGTGAATaGCTGCTATGGGACAGAACA +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYILHMCE*LLWDRT
Trigger: TGTTCTGTCCCATAGCAGTCATTCACACATGTGAAG...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGCAACTTGTACTTTaGTTCTTGTGTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVRQLVL*FLCLLH
Trigger: GTGAAGAAGACACAAGAATCAAAGTACAAGTTGCCT...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTAACCGAGCACTCTTCTaGCATATTCTTACAACTGGA +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALNRALF*HILTTG
Trigger: TCCAGTTGTAAGAATATGTCAGAAGAGTGCTCGGTT...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGAACCGAGCACTCTTCTaGCATATTCTTACAACTGGA +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKNRALF*HILTTG
Trigger: TCCAGTTGTAAGAATATGTCAGAAGAGTGCTCGGTT...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGGTGCGTTTAGAATTCTaGTTACATGAAATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLFAAGFEQTVWLTGVREVRLEF*LHEMLC
Trigger: ACACAGCATTTCATGTAATCAGAATTCTAAACGCAC...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACGACTCCGATGGACACTaGAGCACTCATCACATAAAA +
Preference number: 4 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDDSDGH*STHHIK
Trigger: TTTTATGTGATGAGTGCTGCAGTGTCCATCGGAGTC...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp GAGATTGTAAAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAACAGACAAATCCAGGCTaGTGTCTGCCATTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: EIVKSDQIPHQCQGLSPQQTNPG*CLPFEV
Trigger: TACCTCAAATGGCAGACAGCAGCCTGGATTTGTCTG...TTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTTTACAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCTTCTTAGCAGCTTTTaGCAATTCAGACAAATCCAG +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVLLSSF*QFRQIQ
Trigger: CTGGATTTGTCTGAATTGGCAAAAGCTGCTAAGAAG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTGAGCTAACTTCTGTCTaGCCTGATTTCGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: KSDQIPHQCQGLSPQATVELTSV*PDFVLM
Trigger: CATCAACACGAAATCAGGGCAGACAGAAGTTAGCTC...AACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGCCGGTTTGTTTTGCTTaGAGTGGTTTCCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKPVCFA*SGFQIC
Trigger: ACAGATTTGGAAACCACTGCAAGCAAAACAAACCGG...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGTCTGCCGGTTTGTTTTaGTTGCAGTGGTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKSAGLF*LQWFPN
Trigger: ATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGA...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTTCTGCCGGTTTGTTTTaGTTGCAGTGGTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALSAGLF*LQWFPN
Trigger: ATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGA...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp GGTCCTTCCCTTCTGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTGGGTTACACCAATAGTAGTTaGTCCTCTTCATTAATTAGC +
Preference number: 4 (lower is better)
Translates to: GPSLLVRLHLPWTFYKLGYTNSS*SSSLIS
Trigger: GCTAATTAATGAAGAGGAGCAACTACTATTGGTGTA...ACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp GGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCAAATTCTTCCATTCCTCACATaGAGGCTGCTCCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: GVSSAVYSLTEIVKSDQILPFLT*RLLHGA
Trigger: AGCACCATGGAGCAGCCTGCATGTGAGGAATGGAAG...AATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAGAATCTAGGCTCTTCTaGCGGTTTGTTTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLESRLF*RFVLLA
Trigger: TGCAAGCAAAACAAACCGGCAGAAGAGCCTAGATTC...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACTCAGGTGTGCTGTTCTaGTTCTCCAGCCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNSGVLF*FSSLDA
Trigger: GGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGA...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000553118.5
CDS-3UTR GCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQSHSQV*CSASPA
Trigger: GGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACT...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCTGGGAGGGTCTTCTTaGACTCTGACTGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNLGGSS*TLTAVG
Trigger: ACCGACTGCAGTCAGAGTGCAAGAAGACCCTCCCAG...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAAAACAGAGGAGGCGGTaGCCTGCCCTTGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEKQRRR*PALVSC
Trigger: ACAACTGACAAGGGCAGGGCACCGCCTCCTCTGTTT...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGCAGGGGCAGGGGTTTaGAAGATAAAGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNAGAGV*KIKEGQ
Trigger: CTGACCCTCCTTTATCTTGCAAACCCCTGCCCCTGC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAAGGCAACATCTTCTATTaGAGGTCCTCAAACATTCCA +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQEGNIFY*RSSNIP
Trigger: TGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCC...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGTCTTACAACTGGAAATaGTTTGTTGGTCCCCATGTT +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLSYNWK*FVGPHV
Trigger: AACATGGGGACCAACAAAGCATTTCCAGTTGTAAGA...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACGTTCTCACGCTCGAATaGAGTTGCTTGCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDVLTLE*SCLLRS
Trigger: AGATCTTAGCAAGCAACTCCATTCGAGCGTGAGAAC...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGTCCATTTTTGTGATCTaGTTTCCTGCCACAGAGATA +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLSIFVI*FPATEI
Trigger: TATCTCTGTGGCAGGAAACCAGATCACAAAAATGGA...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAAGCGTGGCAAACTCATaGGCGTTGAACCGAGCTAAC +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKSVANS*ALNRAN
Trigger: GTTAGCTCGGTTCAACGCCCATGAGTTTGCCACGCT...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCTCTCAACGCTGTGCTaGTTATTGATGGTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALLSTLC*LLMVFS
Trigger: ACTGAAAACCATCAATAACCAGCACAGCGTTGAGAG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp ACCACTTTAAAATTTGTCATGGTGGGGCTGGGAAATGTTTGCAGGCAAGCTGTATCTATAAGCTGGGTGTaGTGTGAGTTCAGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: TTLKFVMVGLGNVCRQAVSISWV*CEFSCL
Trigger: TAGACAGCTGAACTCACACCACACCCAGCTTATAGA...TACAGCTTGCCTGCAAACATTTCCCAGCCCCACCATGACAAATTTTAAAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CCA 90 bp GTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTGGTTGTGGACATTCTATAAGCTaGGTGTGGTGTGAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VGSVCVLRTSLHLIYIGCGHSIS*VWCEFS
Trigger: GCTGAACTCACACCACACCCAGCTTATAGAATGTCC...ACAACCAATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CCA 90 bp ATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTTACTCTTTGGCATCTaGCATTTTAAACACCATTCA +
Preference number: 4 (lower is better)
Translates to: IYGIDIFAWMLHAARLLPLLFGI*HFKHHS
Trigger: TGAATGGTGTTTAAAATGCCAGATGCCAAAGAGTAA...CGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGTTAAGGAAGAGTGGTTaGAAGTGTCTGTGTACTCAG +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKLRKSG*KCLCTQ
Trigger: CTGAGTACACAGACACTTCCAACCACTCTTCCTTAA...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGCTGGCTCCATGTCGTTaGGAGTGTTGTCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQLAPCR*ECCRSH
Trigger: GTGACTACGACAACACTCCCAACGACATGGAGCCAG...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTTACCAAGCCATCCCCTaGCCACACCATACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLYQAIP*PHHTSL
Trigger: CAAAGAAGTATGGTGTGGCCAGGGGATGGCTTGGTA...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACATGTCGTACGCACACTaGATGACCTGCTGCGTGACC +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNMSYAH*MTCCVT
Trigger: GGTCACGCAGCAGGTCATCCAGTGTGCGTACGACAT...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCTCTACATACATGCTTaGAGATACCCCAAACTTAGA +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVLYIHA*RYPKLR
Trigger: TCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTAAGCAAGCTGACTTTTaGATGAAGGGTACAACACAG +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALKQADF*MKGTTQ
Trigger: CTGTGTTGTACCCTTCATCCAAAAGTCAGCTTGCTT...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGAAGCAAGCTGACTTTTaGATGAAGGGTACAACACAG +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKKQADF*MKGTTQ
Trigger: CTGTGTTGTACCCTTCATCCAAAAGTCAGCTTGCTT...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAAAAGCAAGCTGACTTTTaGATGAAGGGTACAACACAG +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQEKQADF*MKGTTQ
Trigger: CTGTGTTGTACCCTTCATCCAAAAGTCAGCTTGCTT...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACATAACACACAGGGTTaGCCGGCTCCATTACGGGTA +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKHNTQG*PAPLRV
Trigger: TACCCGTAATGGAGCCGGCCAACCCTGTGTGTTATG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGTTTCATGACAGCATATaGTCAAGCTATAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWFHDSI*SSYKGV
Trigger: CACACCTTTATAGCTTGACCATATGCTGTCATGAAA...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGGAGTTTTGGCACCGTaGGCTAACCGAGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNGVLAP*ANRALF
Trigger: GAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGATCAAACACGTTaGAATAAAAGGCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVRDQTR*NKRHLS
Trigger: ACTGAGATGCCTTTTATTCCAACGTGTTTGATCCCT...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 72 bp CACCATGGAAGCAGCACAAAGATGACTAGGGTTGCTTaGCAAAGCAAGAAAGACAGAAGTTCAGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: HHGSSTKMTRVA*QSKKDRSSACE
Trigger: TTCACAAGCTGAACTTCTGTCTTTCTTGCTTTGCAAAGCAACCCTAGTCATCTTTGTGCTGCTTCCATGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR TCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTTGCTGTCCATTTTTGTaGTCTGGTTTCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLCCPFL*SGFLPQ
Trigger: CTGTGGCAGGAAACCAGATCACAAAAATGGACAGCA...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCTGCTGTCTGCCATTTaGGGTATTATAAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDLLSAI*GIIKCC
Trigger: ACAGCACTTTATAATACCTCAAATGGCAGACAGCAG...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR TCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATGAGTACTCAGGATTaGCCGGAAGAAAGGGGACGA +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQMSTQD*PEERGR
Trigger: TCGTCCCCTTTCTTCCGGTCAATCCTGAGTACTCAT...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGATGAGTACTCAGGATTaGCCGGAAGAAAGGGGACGA +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQMSTQD*PEERGR
Trigger: TCGTCCCCTTTCTTCCGGTCAATCCTGAGTACTCAT...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACAAACTCATGGGCGTTaGACCGAGCTAACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKQTHGR*TELTSV
Trigger: GACAGAAGTTAGCTCGGTTCAACGCCCATGAGTTTG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAACTCCACATTGTCTTTTaGACCCGAGAGAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQLHIVF*TRERTA
Trigger: GGCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAG...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCTCACTCTGGAGTGTTTaGAGCTTTTTCTGCATAATT +
Preference number: 4 (lower is better)
Translates to: KQASFALGSATESLEKPCSLWSV*SFFCII
Trigger: AATTATGCAGAAAAAGCTTCAAACACTCCAGAGTGA...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR TCA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCTTTTTGTAGAAATCTaGAGAGTTCTGCGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVLFVEI*RVLRLN
Trigger: ATTCAGACGCAGAACTCTTCAGATTTCTACAAAAAG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGAACAGGGTAAAACACTaGGAAGAAATGAACCAATTC +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLNRVKH*EEMNQF
Trigger: GAATTGGTTCATTTCTTCTCAGTGTTTTACCCTGTT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGTGGAGCTCCTACCCTaGACATGGCTTCATGAGATG +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNVELLP*TWLHEM
Trigger: CATCTCATGAAGCCATGTTCAGGGTAGGAGCTCCAC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTGGGGTGCTACTTTCATaGCAGCATATGGTCAAGCTA +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLGVLLS*QHMVKL
Trigger: TAGCTTGACCATATGCTGTCATGAAAGTAGCACCCC...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCAACCGAGCACTCTTCTaGCATATTCTTACAACTGGA +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYINRALF*HILTTG
Trigger: TCCAGTTGTAAGAATATGTCAGAAGAGTGCTCGGTT...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GAGATTGTAAAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGACTCCGATGGACACTaGAGCACTCATCACATAAAA +
Preference number: 4 (lower is better)
Translates to: EIVKSDQIPHQCQGLSPQDSDGH*STHHIK
Trigger: TTTTATGTGATGAGTGCTGCAGTGTCCATCGGAGTC...TTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTTTACAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp TACTCTTTGGCATCTGGCATTTTAAACACCATTCACCACGTCCATTCTGCGCAGATCCAGGCTGCTGTCTaGCATTTGAGGTATTATAAA +
Preference number: 4 (lower is better)
Translates to: YSLASGILNTIHHVHSAQIQAAV*HLRYYK
Trigger: TTTATAATACCTCAAATGGCAGACAGCAGCCTGGAT...CTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAATGCCAGATGCCAAAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAAATCCAGGCTGCTGTCTaGCATTTGAGGTATTATAAA +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQEIQAAV*HLRYYK
Trigger: TTTATAATACCTCAAATGGCAGACAGCAGCCTGGAT...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR GCA 90 bp TACTCTTTGGCATCTGGCATTTTAAACACCATTCACCACGTCCATTCTGCGCAGCTTCTTAGCAGCTTTTaGCAATTCAGACAAATCCAG +
Preference number: 4 (lower is better)
Translates to: YSLASGILNTIHHVHSAQLLSSF*QFRQIQ
Trigger: CTGGATTTGTCTGAATTGGCAAAAGCTGCTAAGAAG...CTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAATGCCAGATGCCAAAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCCTTCTTAGCAGCTTTTaGCAATTCAGACAAATCCAG +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLLLSSF*QFRQIQ
Trigger: CTGGATTTGTCTGAATTGGCAAAAGCTGCTAAGAAG...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTGGTTGTGAATCTAGGCTCTTCTaGCGGTTTGTTTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VGSVCVLRTSLHLIYIGCESRLF*RFVLLA
Trigger: TGCAAGCAAAACAAACCGGCAGAAGAGCCTAGATTC...ACAACCAATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR GCA 90 bp AAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTTCACCTTCATTAGCTaGTGTATCTTGGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: KSDQIPHQCQGLSPQATVFTFIS*CILASE
Trigger: TTCTGAGGCCAAGATACAGCAGCTAATGAAGGTGAA...AACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR GCA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAAACTAACTCAGATGACTaGGATACGATACATCTTTCC +
Preference number: 4 (lower is better)
Translates to: QNGCSKQEREELSHSEQETNSDD*DTIHLS
Trigger: GGAAAGATGTATCGTATCGCAGTCATCTGAGTTAGT...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAACAAGCACCGTCGGGGTaGTACTTTCATGACAGCATA +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQQAPSG*YFHDSI
Trigger: TATGCTGTCATGAAAGTAGCACCCCGACGGTGCTTG...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTTTCCAAGGAAAACACTaGTTCACCTCCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLFQGKH*FTSCRQ
Trigger: CTGTCTGCAGGAGGTGAAGCAGTGTTTTCCTTGGAA...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCAATGTTCAGATAAGGTaGGATTTGCCAACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYINVQIR*DLPTGA
Trigger: TGCTCCTGTTGGCAAATCGCACCTTATCTGAACATT...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTCTGTTCAGTCAAGTaGCAGTTTCATAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLFCSVK*QFHKVH
Trigger: GTGCACTTTATGAAACTGGCACTTGACTGAACAGAA...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTTTCTGTTCAGTCAAGTaGCAGTTTCATAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALFCSVK*QFHKVH
Trigger: GTGCACTTTATGAAACTGGCACTTGACTGAACAGAA...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCCAAATAAGAACTATTTaGATTCCAAGGCAGATGACG +
Preference number: 4 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFQIRTI*IPRQMT
Trigger: CGTCATCTGCCTTGGAATGCAAATAGTTCTTATTTG...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCGTAGAGCCTGTTTATTaGATAACTAGCAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLVEPVY*ITSRHK
Trigger: TTTGTGCCTGCTAGTTATGCAATAAACAGGCTCTAC...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAATTCAGATGCCTCACTTaGGAGATATGGCGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQFRCLT*EIWRPR
Trigger: TCTAGGGCGCCATATCTCCCAAGTGAGGCATCTGAA...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAATTCAGATGCCTCACTTaGGAGATATGGCGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKFRCLT*EIWRPR
Trigger: TCTAGGGCGCCATATCTCCCAAGTGAGGCATCTGAA...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCAGGATGAAAGAAGTTaGCTTGTGCTCCTAAAGATA +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALQDERS*LVLLKI
Trigger: TATCTTTAGGAGCACAAGCCAACTTCTTTCATCCTG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAAGAATCCTGTGTGCCTaGGTCTGCTCCATATACTGC +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQRILCA*VCSIYC
Trigger: GCAGTATATGGAGCAGACCCAGGCACACAGGATTCT...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp ATCTTCCATGGACATTCTATAAGCTGGGTGTGGTGTGAGTTCAGCTGTCTACTCTCCATTTTTGTGATCTaGTTTCCTGCCACAGAGATA +
Preference number: 4 (lower is better)
Translates to: IFHGHSISWVWCEFSCLLSIFVI*FPATEI
Trigger: TATCTCTGTGGCAGGAAACCAGATCACAAAAATGGA...GAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTTCCATTTTTGTGATCTaGTTTCCTGCCACAGAGATA +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALSIFVI*FPATEI
Trigger: TATCTCTGTGGCAGGAAACCAGATCACAAAAATGGA...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGCATCGTACACATCCATaGCAAGTTCTTCAAACAAAT +
Preference number: 4 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLHRTHP*QVLQTN
Trigger: ATTTGTTTGAAGAACTTGCCATGGATGTGTACGATG...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACAGCGTGGCAAACTCATaGGCGTTGAACCGAGCTAAC +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNSVANS*ALNRAN
Trigger: GTTAGCTCGGTTCAACGCCCATGAGTTTGCCACGCT...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCCTCTCAACGCTGTGCTaGTTATTGATGGTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYILSTLC*LLMVFS
Trigger: ACTGAAAACCATCAATAACCAGCACAGCGTTGAGAG...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCTTAAGGAAGAGTGGTTaGAAGTGTCTGTGTACTCAG +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYILRKSG*KCLCTQ
Trigger: CTGAGTACACAGACACTTCCAACCACTCTTCCTTAA...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTCTCTTTAAGGAAGAGTaGTTGGAAGTGTCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: KSDQIPHQCQGLSPQATVLFKEE*LEVSVY
Trigger: GTACACAGACACTTCCAACCACTCTTCCTTAAAGAG...AACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCTGGCTCCATGTCGTTaGGAGTGTTGTCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNLAPCR*ECCRSH
Trigger: GTGACTACGACAACACTCCCAACGACATGGAGCCAG...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGTACCAAGCCATCCCCTaGCCACACCATACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQYQAIP*PHHTSL
Trigger: CAAAGAAGTATGGTGTGGCCAGGGGATGGCTTGGTA...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGCTTTATCTCATTCCATaGAGCCTTCAAGATGACAAG +
Preference number: 4 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKLYLIP*SLQDDK
Trigger: CTTGTCATCTTGAAGGCTCCATGGAATGAGATAAAG...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCATAACACACAGGGTTaGCCGGCTCCATTACGGGTA +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNHNTQG*PAPLRV
Trigger: TACCCGTAATGGAGCCGGCCAACCCTGTGTGTTATG...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 72 bp CTTAGAGATTATGAAGTAGGCCAGGAAATTCACTTATaGCACGATGCTTGGCAGGGAACAAATGACGCTGAT +
Preference number: 4 (lower is better)
Translates to: LRDYEVGQEIHL*HDAWQGTNDAD
Trigger: ATCAGCGTCATTTGTTCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCTGGCCTACTTCATAATCTCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
3UTR CAA 72 bp TTACAACTGGAAATGCTTTGTTGGTCCCCATGTTCCTaGACTTTCTCTAGGGCCATAAAGGCAACATCTTCT +
Preference number: 4 (lower is better)
Translates to: LQLEMLCWSPCS*TFSRAIKATSS
Trigger: AGAAGATGTTGCCTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAGTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAATGAGTACTCAGGATTaGCCGGAAGAAAGGGGACGA +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEMSTQD*PEERGR
Trigger: TCGTCCCCTTTCTTCCGGTCAATCCTGAGTACTCAT...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAATATGGTTTCTGACCTaGTCCGGTCTCGTACATGGA +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKIWFLT*SGLVHG
Trigger: TCCATGTACGAGACCGGATCAGGTCAGAAACCATAT...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTACTTTTGGATGTATGTaGTCAACTCAACAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALTFGCM*STQQLL
Trigger: CAACAACTGTTGAGTTGATCACATACATCCAAAAGT...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAGTCAGAGAAGCAAGCTaGCTTTTGGATGAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQVREAS*LLDEGY
Trigger: GTACCCTTCATCCAAAAGTCAGCTTGCTTCTCTGAC...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTGTGAAGCAACTCATGTaGGAAAGCTGTAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLVKQLM*ESCKWS
Trigger: TGACCACTTACAGCTTTCTCACATGAGTTGCTTCAC...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTCTTCACATGTGTGAATaGCTGCTATGGGACAGAACA +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLLHMCE*LLWDRT
Trigger: TGTTCTGTCCCATAGCAGTCATTCACACATGTGAAG...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAAGGCAACTTGTACTTTaGTTCTTGTGTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLRQLVL*FLCLLH
Trigger: GTGAAGAAGACACAAGAATCAAAGTACAAGTTGCCT...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGGGGTGCTACTTTCATaGCAGCATATGGTCAAGCTA +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQGVLLS*QHMVKL
Trigger: TAGCTTGACCATATGCTGTCATGAAAGTAGCACCCC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAAGGAGCAGAGAACTCTaGCACCAGATCTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYERSREL*HQISDE
Trigger: CTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCT...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTGACTCCGATGGACACTaGAGCACTCATCACATAAAA +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLDSDGH*STHHIK
Trigger: TTTTATGTGATGAGTGCTGCAGTGTCCATCGGAGTC...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCAAATTGGTGTGTGTTTCAGATaGCTCACTTGGGAGATATGG +
Preference number: 4 (lower is better)
Translates to: GVSSAVYSLTEIVKSDQIGVCFR*LTWEIW
Trigger: CCATATCTCCCAAGTGAGGCATCTGAAACACACACC...AATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGGTGTGTGTTTCAGATaGCTCACTTGGGAGATATGG +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQGVCFR*LTWEIW
Trigger: CCATATCTCCCAAGTGAGGCATCTGAAACACACACC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAGTGCCCTCCTTGCCTTaGATAATCAACGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQVPSLP*IINGSF
Trigger: AAAACTCCCGTTGATTATGCAAGGCAAGGAGGGCAC...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAATCCAGGCTGCTGTCTaGCATTTGAGGTATTATAAA +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLIQAAV*HLRYYK
Trigger: TTTATAATACCTCAAATGGCAGACAGCAGCCTGGAT...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR GCA 90 bp CTAGCCGGGCTGAAAGTAAAAAGCCAATACAAACAAGGACCCTTTCTTCTGGATATCCAGGCTGCTGTCTaGCATTTGAGGTATTATAAA +
Preference number: 4 (lower is better)
Translates to: LAGLKVKSQYKQGPFLLDIQAAV*HLRYYK
Trigger: TTTATAATACCTCAAATGGCAGACAGCAGCCTGGAT...ATCCAGAAGAAAGGGTCCTTGTTTGTATTGGCTTTTTACTTTCAGCCCGGCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR GCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACAGACAAATCCAGGCTaGTGTCTGCCATTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKQTNPG*CLPFEV
Trigger: TACCTCAAATGGCAGACAGCAGCCTGGATTTGTCTG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000553118.5
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCACACACAGAATGGCTaGAGTAAGCAGGAACGGGAA +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNHTQNG*SKQERE
Trigger: TTCCCGTTCCTGCTTACTGCAGCCATTCTGTGTGTG...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAACACACACAGAATGGCTaGAGTAAGCAGGAACGGGAA +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEHTQNG*SKQERE
Trigger: TTCCCGTTCCTGCTTACTGCAGCCATTCTGTGTGTG...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAACAAGCACCGTCGGGGTaGTACTTTCATGACAGCATA +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEQAPSG*YFHDSI
Trigger: TATGCTGTCATGAAAGTAGCACCCCGACGGTGCTTG...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAATTCCAAGGAAAACACTaGTTCACCTCCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQFQGKH*FTSCRQ
Trigger: CTGTCTGCAGGAGGTGAAGCAGTGTTTTCCTTGGAA...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAGCCAGTTTCATAAAGTaGACCTCTGCCCTATCAGCT +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQASFIK*TSALSA
Trigger: AGCTGATAGGGCAGAGGTGCACTTTATGAAACTGGC...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTGTTCTCACGCTCGAATaGAGTTGCTTGCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLVLTLE*SCLLRS
Trigger: AGATCTTAGCAAGCAACTCCATTCGAGCGTGAGAAC...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGGAGGCAACATGGAGTaGGGTGTTTCCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNGGNME*GVSFFR
Trigger: CCTGAAAAAGGAAACACCCCACTCCATGTTGCCTCC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAAGAATCCTGTGTGCCTaGGTCTGCTCCATATACTGC +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYERILCA*VCSIYC
Trigger: GCAGTATATGGAGCAGACCCAGGCACACAGGATTCT...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCATCGTACACATCCATaGCAAGTTCTTCAAACAAAT +
Preference number: 4 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALHRTHP*QVLQTN
Trigger: ATTTGTTTGAAGAACTTGCCATGGATGTGTACGATG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTTTACTCTTTGGCATCTaGCATTTTAAACACCATTCA +
Preference number: 4 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLLLFGI*HFKHHS
Trigger: TGAATGGTGTTTAAAATGCCAGATGCCAAAGAGTAA...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGTTAGCTGCTGTATCTTaGCCTCAGAAGCCACTAGAG +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQLAAVS*PQKPLE
Trigger: CTCTAGTGGCTTCTGAGGCCAAGATACAGCAGCTAA...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000553118.5
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGCTCGCTTCTCCCATTaGGAGATATGGTTTCTGACC +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNARFSH*EIWFLT
Trigger: GGTCAGAAACCATATCTCCCAATGGGAGAAGCGAGC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAGCACAAAATGAGTTCTaGCTTGTTAGACTGATGCTT +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLAQNEF*LVRLML
Trigger: AAGCATCAGTCTAACAAGCCAGAACTCATTTTGTGC...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGAAAAGGCTATCAGATaGCGCCTGAACTTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQEKAIR*RLNLRW
Trigger: CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ACCACTTTAAAATTTGTCATGGTGGGGCTGGGAAATGTTTGCAGGCAAGCTGTAAGGCAAGCTGTACACTaGATTATTACTAAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: TTLKFVMVGLGNVCRQAVRQAVH*IITKAV
Trigger: AACAGCCTTAGTAATAATCCAGTGTACAGCTTGCCT...TACAGCTTGCCTGCAAACATTTCCCAGCCCCACCATGACAAATTTTAAAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR TCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACTGCTGTCCATTTTTGTaGTCTGGTTTCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNCCPFL*SGFLPQ
Trigger: CTGTGGCAGGAAACCAGATCACAAAAATGGACAGCA...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAATTGTGGCCTGTTTCCTaGGGTTCGAATTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQLWPVS*GSNFHS
Trigger: AGAGTGAAAATTCGAACCTCAGGAAACAGGCCACAA...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAATATGGTTTCTGACCTaGTCCGGTCTCGTACATGGA +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEIWFLT*SGLVHG
Trigger: TCCATGTACGAGACCGGATCAGGTCAGAAACCATAT...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGTACGTGTATCCTCTCTaGGCAGGGAATATAACTGTC +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQYVYPL*AGNITV
Trigger: GACAGTTATATTCCCTGCTCAGAGAGGATACACGTA...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAATCTGGCTTGTTAGACTaGTGCTTCTCTTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYESGLLD*CFSLLQ
Trigger: CTGCAGCAAAGAGAAGCATCAGTCTAACAAGCCAGA...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTAGGTTTCTTGTCTCTTaGAAAATCAAAGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLRFLVS*KIKAVA
Trigger: GGCCACAGCTTTGATTTTTCAAGAGACAAGAAACCT...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGGGGTGCTACTTTCATaGCAGCATATGGTCAAGCTA +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNGVLLS*QHMVKL
Trigger: TAGCTTGACCATATGCTGTCATGAAAGTAGCACCCC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGACTCCGATGGACACTaGAGCACTCATCACATAAAA +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQDSDGH*STHHIK
Trigger: TTTTATGTGATGAGTGCTGCAGTGTCCATCGGAGTC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAGACTCCGATGGACACTaGAGCACTCATCACATAAAA +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQDSDGH*STHHIK
Trigger: TTTTATGTGATGAGTGCTGCAGTGTCCATCGGAGTC...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTAATGTTCAGATAAGGTaGGATTTGCCAACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLNVQIR*DLPTGA
Trigger: TGCTCCTGTTGGCAAATCGCACCTTATCTGAACATT...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTACAAATAAGAACTATTTaGATTCCAAGGCAGATGACG +
Preference number: 4 (lower is better)
Translates to: MLLTVKQNATKASTHGDLQIRTI*IPRQMT
Trigger: CGTCATCTGCCTTGGAATGCAAATAGTTCTTATTTG...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAGATGCCTTCATTAGCTaGTGTATCTTGGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKDAFIS*CILASE
Trigger: TTCTGAGGCCAAGATACAGCAGCTAATGAAGGCATC...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553118.5
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGCTTTGGAGGCAACATaGAGTGGGGTGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNALEAT*SGVFPF
Trigger: AAAAGGAAACACCCCACTCCATGTTGCCTCCAAAGC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCCATCGTACACATCCATaGCAAGTTCTTCAAACAAAT +
Preference number: 4 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIHRTHP*QVLQTN
Trigger: ATTTGTTTGAAGAACTTGCCATGGATGTGTACGATG...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCATCGTACACATCCATaGCAAGTTCTTCAAACAAAT +
Preference number: 4 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDHRTHP*QVLQTN
Trigger: ATTTGTTTGAAGAACTTGCCATGGATGTGTACGATG...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGTGTGGGACAAACAAGTaGAAGAGTCTTTTGGAGACG +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQCGTNK*KSLLET
Trigger: CGTCTCCAAAAGACTCTTCCACTTGTTTGTCCCACA...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAACTGGAAATGCTTTGTTaGTCCCCATGTTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQLEMLC*SPCSLT
Trigger: AGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGACGAACGCTAACATCTaGTACTTGGCTCTGATGAAT +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQTNANI*YLALMN
Trigger: ATTCATCAGAGCCAAGTATCAGATGTTAGCGTTCGT...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAACTGCTGTCTGCCATTTaGGGTATTATAAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQLLSAI*GIIKCC
Trigger: ACAGCACTTTATAATACCTCAAATGGCAGACAGCAG...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000553118.5
CDS-3UTR TCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAAAGCTGACTTTTGGATaGAGGGTACAACACAGTGTC +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEKLTFG*RVQHSV
Trigger: GACACTGTGTTGTACCCTTCATCCAAAAGTCAGCTT...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAAGGTTTCTTGTCTCTTaGAAAATCAAAGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQRFLVS*KIKAVA
Trigger: GGCCACAGCTTTGATTTTTCAAGAGACAAGAAACCT...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCCATGCTACTCACAGTaGAGCAAAATGCGACAAAAG +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNPCYSQ*SKMRQK
Trigger: CTTTTGTCGCATTTTGCTTCACTGTGAGTAGCATGG...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGAGCTAACTTCTGTCTaGCCTGATTTCGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNELTSV*PDFVLM
Trigger: CATCAACACGAAATCAGGGCAGACAGAAGTTAGCTC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAGAGCTAACTTCTGTCTaGCCTGATTTCGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEELTSV*PDFVLM
Trigger: CATCAACACGAAATCAGGGCAGACAGAAGTTAGCTC...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCAAATTCCGGTTTGTTTTGCTTaGAGTGGTTTCCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: GVSSAVYSLTEIVKSDQIPVCFA*SGFQIC
Trigger: ACAGATTTGGAAACCACTGCAAGCAAAACAAACCGG...AATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR GCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAGAATCTAGGCTCTTCTaGCGGTTTGTTTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEESRLF*RFVLLA
Trigger: TGCAAGCAAAACAAACCGGCAGAAGAGCCTAGATTC...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR GCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTCTTTCTCTACATACATaGTTGGAGATACCCCAAACT +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLLSLHT*LEIPQT
Trigger: AGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAG...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTTCTTACAACTGGAAATaGTTTGTTGGTCCCCATGTT +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLSYNWK*FVGPHV
Trigger: AACATGGGGACCAACAAAGCATTTCCAGTTGTAAGA...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTGTAGAGCCTGTTTATTaGATAACTAGCAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLVEPVY*ITSRHK
Trigger: TTTGTGCCTGCTAGTTATGCAATAAACAGGCTCTAC...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCAAATTCTCTCAACGCTGTGCTaGTTATTGATGGTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: GVSSAVYSLTEIVKSDQILSTLC*LLMVFS
Trigger: ACTGAAAACCATCAATAACCAGCACAGCGTTGAGAG...AATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CCA 90 bp GGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCAAATTCCCTTTCTTCTGGATTaGGTGAAACACAATCAACTC +
Preference number: 4 (lower is better)
Translates to: GVSSAVYSLTEIVKSDQIPFLLD*VKHNQL
Trigger: GAGTTGATTGTGTTTCACCCAATCCAGAAGAAAGGG...AATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR TCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAGGCAACTTGTACTTTaGTTCTTGTGTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQRQLVL*FLCLLH
Trigger: GTGAAGAAGACACAAGAATCAAAGTACAAGTTGCCT...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGATTGAGAATACAGGGTaGAAAAGAACGACGTTACTG +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQIENTG*KRTTLL
Trigger: CAGTAACGTCGTTCTTTTTCACCCTGTATTCTCAAT...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAATGAAATGCTGTGTTTaGTCTTTGGGCCCAATTCAC +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEMKCCV*SLGPIH
Trigger: GTGAATTGGGCCCAAAGATCAAACACAGCATTTCAT...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTGTGCGTTTAGAATTCTaGTTACATGAAATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLVRLEF*LHEMLC
Trigger: ACACAGCATTTCATGTAATCAGAATTCTAAACGCAC...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCAAATTTTTTCAAATGAGCCCTaGGCAATTTGTAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GVSSAVYSLTEIVKSDQIFSNEP*AICKGQ
Trigger: TTGGCCTTTACAAATTGCTCAGGGCTCATTTGAAAA...AATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR GCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATCCAGGCTGCTGTCTaGCATTTGAGGTATTATAAA +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQIQAAV*HLRYYK
Trigger: TTTATAATACCTCAAATGGCAGACAGCAGCCTGGAT...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000553118.5
CDS-3UTR GCA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAACTTCTTAGCAGCTTTTaGCAATTCAGACAAATCCAG +
Preference number: 4 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQLLSSF*QFRQIQ
Trigger: CTGGATTTGTCTGAATTGGCAAAAGCTGCTAAGAAG...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCCGGTTTGTTTTGCTTaGAGTGGTTTCCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNPVCFA*SGFQIC
Trigger: ACAGATTTGGAAACCACTGCAAGCAAAACAAACCGG...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACTTCACCTTCATTAGCTaGTGTATCTTGGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNFTFIS*CILASE
Trigger: TTCTGAGGCCAAGATACAGCAGCTAATGAAGGTGAA...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR GCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACTTTCTCTACATACATaGTTGGAGATACCCCAAACT +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKLSLHT*LEIPQT
Trigger: AGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGGCAACATCTTCTATTaGAGGTCCTCAAACATTCCA +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNGNIFY*RSSNIP
Trigger: TGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAATTCTGTTCAGTCAAGTaGCAGTTTCATAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKFCSVK*QFHKVH
Trigger: GTGCACTTTATGAAACTGGCACTTGACTGAACAGAA...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR GCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAGCTGCTCCTTCTGTCTaGCATTTGAGGTATTATAAA +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKAAPSV*HLRYYK
Trigger: TTTATAATACCTCAAATGGCAGACAGAAGGAGCAGC...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354574.8
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCTCTCAACGCTGTGCTaGTTATTGATGGTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNLSTLC*LLMVFS
Trigger: ACTGAAAACCATCAATAACCAGCACAGCGTTGAGAG...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAACTCTTTAAGGAAGAGTaGTTGGAAGTGTCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYELFKEE*LEVSVY
Trigger: GTACACAGACACTTCCAACCACTCTTCCTTAAAGAG...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAGTAGTGATACCTAAATaGGTGGCACAAAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKVVIPK*VAQNEF
Trigger: GAACTCATTTTGTGCCACCCATTTAGGTATCACTAC...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACAAGCAAGCTGACTTTTaGATGAAGGGTACAACACAG +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNKQADF*MKGTTQ
Trigger: CTGTGTTGTACCCTTCATCCAAAAGTCAGCTTGCTT...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTAGAAAACTATACTATTaGAAAGCTCATGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLRKLYY*KAHGCH
Trigger: ATGGCACCCATGAGCTTTCCAATAGTATAGTTTTCT...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACTTTTTGTAGAAATCTaGAGAGTTCTGCGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKLFVEI*RVLRLN
Trigger: ATTCAGACGCAGAACTCTTCAGATTTCTACAAAAAG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR TCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACATTGAGAATACAGGGTaGAAAAGAACGACGTTACTG +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNIENTG*KRTTLL
Trigger: CAGTAACGTCGTTCTTTTTCACCCTGTATTCTCAAT...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGGATGAAAGAAGTTaGCTTGTGCTCCTAAAGATA +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNQDERS*LVLLKI
Trigger: TATCTTTAGGAGCACAAGCCAACTTCTTTCATCCTG...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACTCCATTTTTGTGATCTaGTTTCCTGCCACAGAGATA +
Preference number: 4 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNSIFVI*FPATEI
Trigger: TATCTCTGTGGCAGGAAACCAGATCACAAAAATGGA...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAGCACAAAATGAGTTCTaGCTTGTTAGACTGATGCTT +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEAQNEF*LVRLML
Trigger: AAGCATCAGTCTAACAAGCCAGAACTCATTTTGTGC...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAGAAAACTATACTATTaGAAAGCTCATGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQRKLYY*KAHGCH
Trigger: ATGGCACCCATGAGCTTTCCAATAGTATAGTTTTCT...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAAGGGATCAAACACGTTaGAATAAAAGGCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYERDQTR*NKRHLS
Trigger: ACTGAGATGCCTTTTATTCCAACGTGTTTGATCCCT...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAACTTTTGGATGTATGTaGTCAACTCAACAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYETFGCM*STQQLL
Trigger: CAACAACTGTTGAGTTGATCACATACATCCAAAAGT...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR TCA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAGTGCGTTTAGAATTCTaGTTACATGAAATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEVRLEF*LHEMLC
Trigger: ACACAGCATTTCATGTAATCAGAATTCTAAACGCAC...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS GCA 90 bp AAAGGCGGCGGTGGCGGCGGCGCTTCCGCTCTAACGGGTCCCAGCTaGGGCGGCGCTGACGGCGGCGCCTCTCCCCTCAGCGCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: KGGGGGGASALTGPS*GGADGGASPLSALQ
Trigger: CTGCAAGGCGCTGAGGGGAGAGGCGCCGCCGTCAGCGCCGCCGCAGCTGGGACCCGTTAGAGCGGAAGCGCCGCCGCCACCGCCGCCTTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000548643.5
ENST00000551455.5
ENST00000553118.5
CDS GCA 90 bp GTAGGGGTCCGGGCCAGGAAAGCAGAGGGGAGCGGGCCCGGCCGGTaGGACTCACCCGGCCCGCTGCAGTCAGCGCACACCTCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: VGVRARKAEGSGPGR*DSPGPLQSAHTSLL
Trigger: GAGCAGCGAGGTGTGCGCTGACTGCAGCGGGCCGGGTGAGTCGCACCGGCCGGGCCCGCTCCCCTCTGCTTTCCTGGCCCGGACCCCTAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548643.5
CDS GCA 90 bp GCCGGTGCGACTCACCCGGCCCGCTGCAGTCAGCGCACACCTCGCTaGTCCGGAGCCGTTTCGACATGGCTCCCACCTCCCACCTGCGGG +
Preference number: 5 (lower is better)
Translates to: AGATHPARCSQRTPR*SGAVSTWLPPPTCG
Trigger: CCCGCAGGTGGGAGGTGGGAGCCATGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTGACTGCAGCGGGCCGGGTGAGTCGCACCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548643.5
CDS GCA 90 bp AAGCAGAGGGGAGCGGGCCCGGCCGGTGCGACTCACCCGGCCCGCTaGAGTCAGCGCACACCTCGCTGCTCCGGAGCCGTTTCGACATGG +
Preference number: 5 (lower is better)
Translates to: KQRGAGPAGATHPAR*SQRTPRCSGAVSTW
Trigger: CCATGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTGACTGCAGCGGGCCGGGTGAGTCGCACCGGCCGGGCCCGCTCCCCTCTGCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548643.5
CDS GCA 90 bp CCTCGCTGCTCCGGAGCCGTTTCGACATGGCTCCCACCTCCCACCTaGGGGGAACTAGAGGCCGGGGGACAGCAAAGGCGGCGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: PRCSGAVSTWLPPPT*GELEAGGQQRRRWR
Trigger: CCGCCACCGCCGCCTTTGCTGTCCCCCGGCCTCTAGTTCCCCGCAGGTGGGAGGTGGGAGCCATGTCGAAACGGCTCCGGAGCAGCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547815.5
ENST00000548643.5
ENST00000551455.5
ENST00000553118.5
CDS GCA 90 bp ATGCCCAGGAAGGATCCGGCCCGCTGCAGTCAGCGCACACCTCGCTaGTCCGGAGCCGTTTCGACATGGCTCCCACCTCCCACCTGCGGG +
Preference number: 5 (lower is better)
Translates to: MPRKDPARCSQRTPR*SGAVSTWLPPPTCG
Trigger: CCCGCAGGTGGGAGGTGGGAGCCATGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTGACTGCAGCGGGCCGGATCCTTCCTGGGCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547815.5
ENST00000551455.5
ENST00000553118.5
CDS CCA 90 bp CGCTGCAGTCAGCGCACACCTCGCTGCTCCGGAGCCGTTTCGACATaGCTCCCACCTCCCACCTGCGGGGAACTAGAGGCCGGGGGACAG +
Preference number: 5 (lower is better)
Translates to: RCSQRTPRCSGAVST*LPPPTCGELEAGGQ
Trigger: CTGTCCCCCGGCCTCTAGTTCCCCGCAGGTGGGAGGTGGGAGCCATGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTGACTGCAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547815.5
ENST00000548643.5
ENST00000551455.5
ENST00000553118.5
CDS-3UTR CAA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTGAAAGGGGACGACCGTaGTCTCGGTTACCAGGGCGC +
Preference number: 5 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGERGRP*SRLPGR
Trigger: GCGCCCTGGTAACCGAGACAACGGTCGTCCCCTTTC...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS GCA 90 bp GTGCACTCCTCCCGATGTGCGCGGGGAAGGGCTGGAGTCTCATCCTaGTCTCTTCGGGGCGGCTCGCTTCTCCCATTGGGAGATATGGTT +
Preference number: 5 (lower is better)
Translates to: VHSSRCARGRAGVSS*SLRGGSLLPLGDMV
Trigger: AACCATATCTCCCAATGGGAGAAGCGAGCCGCCCCGAAGAGAGCAGGATGAGACTCCAGCCCTTCCCCGCGCACATCGGGAGGAGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000551209.5
CDS GCA 90 bp TCTCCAGCCTGGATGCGTGCGCGGGGAAGGGCTGGAGTCTCATCCTaGTCTCTTCGGGGCGGCTCGCTTCTCCCATTGGGAGATATGGTT +
Preference number: 5 (lower is better)
Translates to: SPAWMRARGRAGVSS*SLRGGSLLPLGDMV
Trigger: AACCATATCTCCCAATGGGAGAAGCGAGCCGCCCCGAAGAGAGCAGGATGAGACTCCAGCCCTTCCCCGCGCACGCATCCAGGCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
CDS TCA 90 bp ACCCAACCTCACTGCACAGCAGCTTTGGCAGGGCTAGCCCTCAGCTaGTGCGTGCTTGCCCTTCCATGGGACGCATGGCCTCTCACCTTC +
Preference number: 5 (lower is better)
Translates to: TQPHCTAALAGLALS*CVLALPWDAWPLTF
Trigger: GAAGGTGAGAGGCCATGCGTCCCATGGAAGGGCAAGCACGCATCAGCTGAGGGCTAGCCCTGCCAAAGCTGCTGTGCAGTGAGGTTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS GCA 90 bp CTGCACAGCAGCTTTGGCAGGGCTAGCCCTCAGCTGATGCGTGCTTaGCCTTCCATGGGACGCATGGCCTCTCACCTTCTGCCGGTTTGT +
Preference number: 5 (lower is better)
Translates to: LHSSFGRASPQLMRA*PSMGRMASHLLPVC
Trigger: ACAAACCGGCAGAAGGTGAGAGGCCATGCGTCCCATGGAAGGGCAAGCACGCATCAGCTGAGGGCTAGCCCTGCCAAAGCTGCTGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS-3UTR CAA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCCCATCTGAAGCAGTGTaGGAGGCCACGGTGTGTGTT +
Preference number: 5 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCPSEAV*EATVCV
Trigger: AACACACACCGTGGCCTCCAACACTGCTTCAGATGG...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGCAGGGCGCTGTGGTTTaGCGTGGCAAGCCAGACTGC +
Preference number: 5 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRQGAVV*RGKPDC
Trigger: GCAGTCTGGCTTGCCACGCAAAACCACAGCGCCCTG...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTCCCTGCCCTTGTCAGTaGTTGTTCTCTTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGPCPCQ*LFSLVV
Trigger: CACCACCAAAGAGAACAACAACTGACAAGGGCAGGG...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCGGCGGTGCCCTGCCCTaGTCAGTTGTTGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCGGALP*SVVVLF
Trigger: AAAGAGAACAACAACTGACAAGGGCAGGGCACCGCC...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS TCA 90 bp TTCGGGGCGGCTCGCTTCTCCCATTGGGAGATATGGTTTCTGACCTaGTCCGGTCTCGTACATGGACATGGGCCTACTGCCCCGGGCAGA +
Preference number: 5 (lower is better)
Translates to: FGAARFSHWEIWFLT*SGLVHGHGPTAPGR
Trigger: TCTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGACCGGATCAGGTCAGAAACCATATCTCCCAATGGGAGAAGCGAGCCGCCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
ENST00000551209.5
CDS TCA 90 bp CTCTCTTCGGGGCGGCTCGCTTCTCCCATTGGGAGATATGGTTTCTaGCCTGATCCGGTCTCGTACATGGACATGGGCCTACTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: LSSGRLASPIGRYGF*PDPVSYMDMGLLPR
Trigger: CCGGGGCAGTAGGCCCATGTCCATGTACGAGACCGGATCAGGTCAGAAACCATATCTCCCAATGGGAGAAGCGAGCCGCCCCGAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
ENST00000551209.5
CDS GCA 90 bp GCTGAACGTCTGTGGGTGAGCCGGGGTCCCCTGGGAGGGTCTTCTTaGACTCTGACTGCAGTCGGTAGGCACTGGACGTCAGTAAACGAA +
Preference number: 5 (lower is better)
Translates to: AERLWVSRGPLGGSS*TLTAVGRHWTSVNE
Trigger: TTCGTTTACTGACGTCCAGTGCCTACCGACTGCAGTCAGAGTGCAAGAAGACCCTCCCAGGGGACCCCGGCTCACCCACAGACGTTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000550186.5
ENST00000551209.5
ENST00000552978.5
ENST00000553118.5
CDS GCA 90 bp CTGGCTCCATGTCGTTGGGAGTGTTGTCGTAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCCTGGATGCGTGCGCGGGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: LAPCRWECCRSHSQV*CSASPAWMRARGRA
Trigger: AGCCCTTCCCCGCGCACGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACTACGACAACACTCCCAACGACATGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
CDS CCA 90 bp ACCGGAAGAAAGGGGACGACCGTTGTCTCGGTTACCAGGGCGCTGTaGTTTTGCGTGGCAAGCCAGACTGCATCCGTCTCTCGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: TGRKGTTVVSVTRAL*FCVASQTASVSRLS
Trigger: TGACAGGCGAGAGACGGATGCAGTCTGGCTTGCCACGCAAAACCACAGCGCCCTGGTAACCGAGACAACGGTCGTCCCCTTTCTTCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547815.5
ENST00000550186.5
ENST00000551209.5
ENST00000551455.5
ENST00000553118.5
CDS-3UTR CAA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCACACCGGGGAACTTGTTaGGAGTTTTGGCACCGTGGG +
Preference number: 5 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPHRGTC*EFWHRG
Trigger: CCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTG...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCGGTGCCCTCCTTGCCTaGCATAATCAACGGGAGTTT +
Preference number: 5 (lower is better)
Translates to: NARGTYREDDLQPSNGHVGALLA*HNQREF
Trigger: AAACTCCCGTTGATTATGCAAGGCAAGGAGGGCACC...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCGATGAGTACTCAGGATaGACCGGAAGAAAGGGGACG +
Preference number: 5 (lower is better)
Translates to: NARGTYREDDLQPSNGHVDEYSG*TGRKGT
Trigger: CGTCCCCTTTCTTCCGGTCAATCCTGAGTACTCATC...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTGGTCCCCATGTTCCTaGACTTTCTCTAGGGCCATA +
Preference number: 5 (lower is better)
Translates to: FPEASTEARPPWDSRGRGWSPCS*TFSRAI
Trigger: TATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCA...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCATCTGCCCTATCAGCTTaGGGGGAAGGGTGGCATATG +
Preference number: 5 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPSALSA*GEGWHM
Trigger: CATATGCCACCCTTCCCCCAAAGCTGATAGGGCAGA...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS GCA 90 bp CTGGCTCCATGTCGTTGGGAGTGTTGTCGTAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCCTGGATGCCCTTCGGGCGCTTTCGT +
Preference number: 5 (lower is better)
Translates to: LAPCRWECCRSHSQV*CSASPAWMPFGRFR
Trigger: ACGAAAGCGCCCGAAGGGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACTACGACAACACTCCCAACGACATGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000551209.5
CDS GCA 90 bp CTGGCTCCATGTCGTTGGGAGTGTTGTCGTAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCCTGTAGTCCCAGCTCCTCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: LAPCRWECCRSHSQV*CSASPACSPSSSGG
Trigger: GCCTCCTGAGGAGCTGGGACTACAGGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACTACGACAACACTCCCAACGACATGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548655.5
CDS CCA 90 bp TTCAGTCTTCCTGATGACATCTTCGGTGCTAGGGAGAGTGGGGCTTaGGGCCACATGGGGTTCTGCTGTGTCTGGTACCAAGCCATCCCC +
Preference number: 5 (lower is better)
Translates to: FSLPDDIFGARESGA*GHMGFCCVWYQAIP
Trigger: GGGGATGGCTTGGTACCAGACACAGCAGAACCCCATGTGGCCCCAAGCCCCACTCTCCCTAGCACCGAAGATGTCATCAGGAAGACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000546613.5
ENST00000548000.5
ENST00000548655.5
ENST00000549999.1
ENST00000550186.5
ENST00000551209.5
ENST00000552978.5
ENST00000553118.5
CDS-3UTR CAA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTACAGGGCGCTGTGGTTTaGCGTGGCAAGCCAGACTGC +
Preference number: 5 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLQGAVV*RGKPDC
Trigger: GCAGTCTGGCTTGCCACGCAAAACCACAGCGCCCTG...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCGCCGGTTTGTTTTGCTaGCAGTGGTTTCCAAATCTG +
Preference number: 5 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCAGLFC*QWFPNL
Trigger: CAGATTTGGAAACCACTGCAAGCAAAACAAACCGGC...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTATTAGCTGCTGTATCTaGGCCTCAGAAGCCACTAGA +
Preference number: 5 (lower is better)
Translates to: FPEASTEARPPWDSRGRGISCCI*ASEATR
Trigger: TCTAGTGGCTTCTGAGGCCAAGATACAGCAGCTAAT...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR CAA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCACCCTGCCCTTGTCAGTaGTTGTTCTCTTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPPCPCQ*LFSLVV
Trigger: CACCACCAAAGAGAACAACAACTGACAAGGGCAGGG...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCCAGGAAATTCACTTATaGCACGATGCTTGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCQEIHL*HDAWQG
Trigger: TCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCTG...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTAAGTGGAAGAGTCTTTaGGAGACGTGGACCCTTTTC +
Preference number: 5 (lower is better)
Translates to: FPEASTEARPPWDSRGRGKWKSL*ETWTLF
Trigger: GAAAAGGGTCCACGTCTCCAAAAGACTCTTCCACTT...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTTGCACTGGAAATGCTTTGTaGGTCCCCATGTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: QKPLQKPVLPGTAGAGVCTGNAL*VPMFLD
Trigger: GTCAAGGAACATGGGGACCAACAAAGCATTTCCAGT...GCAAACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS CCA 90 bp CTCCCATTGGGAGATATGGTTTCTGACCTGATCCGGTCTCGTACATaGACATGGGCCTACTGCCCCGGGCAGACGGACGTCTCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: LPLGDMVSDLIRSRT*TWAYCPGQTDVSLR
Trigger: CCTTAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGACCGGATCAGGTCAGAAACCATATCTCCCAATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
ENST00000551209.5
CDS-3UTR CAA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCAGGGCGCTGTGGTTTaGCGTGGCAAGCCAGACTGC +
Preference number: 5 (lower is better)
Translates to: SMELTSSHGCSTQHACFRQGAVV*RGKPDC
Trigger: GCAGTCTGGCTTGCCACGCAAAACCACAGCGCCCTG...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp GGTCCTTCCCTTCTGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTGGGTGAAAGGGGACGACCGTaGTCTCGGTTACCAGGGCGC +
Preference number: 5 (lower is better)
Translates to: GPSLLVRLHLPWTFYKLGERGRP*SRLPGR
Trigger: GCGCCCTGGTAACCGAGACAACGGTCGTCCCCTTTC...ACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAGAAAGGGGACGACCGTaGTCTCGGTTACCAGGGCGC +
Preference number: 5 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPERGRP*SRLPGR
Trigger: GCGCCCTGGTAACCGAGACAACGGTCGTCCCCTTTC...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCGCCTTCATCTGGGCTGATCGTTGTCTaGACTCTCAACGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: HSPRPFCAGSFPSGAPSSGLIVV*TLNAVL
Trigger: CAGCACAGCGTTGAGAGTCAAGACAACGATCAGCCC...AGATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCGCCGGTTTGTTTTGCTaGCAGTGGTTTCCAAATCTG +
Preference number: 5 (lower is better)
Translates to: NARGTYREDDLQPSNGHVAGLFC*QWFPNL
Trigger: CAGATTTGGAAACCACTGCAAGCAAAACAAACCGGC...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTGCCACTAGAGCGTTTTaGACCTCCATAAATTCCTGT +
Preference number: 5 (lower is better)
Translates to: FPEASTEARPPWDSRGRGATRAF*TSINSC
Trigger: ACAGGAATTTATGGAGGTCAAAAACGCTCTAGTGGC...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR CAA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTAGCTCGTCACTCAAGTaGTTATTCACCTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGSSSLK*LFTFIS
Trigger: GCTAATGAAGGTGAATAACAACTTGAGTGACGAGCT...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR CAA 90 bp GTGTGTCCGGGGAAGCCAGGCCCTCACACTGCACAGCTTACAGGGCCCTGGGGTTCAACTCAACAGTTGTaGACAACACAACCGAACATC +
Preference number: 5 (lower is better)
Translates to: VCPGKPGPHTAQLTGPWGSTQQL*TTQPNI
Trigger: GATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGA...ACCCCAGGGCCCTGTAAGCTGTGCAGTGTGAGGGCCTGGCTTCCCCGGACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGATTCCACCGGGGAACTaGTTTGGAGTTTTGGCACCG +
Preference number: 5 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRIPPGN*FGVLAP
Trigger: CGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAAT...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCAGGCGAGTTTTGCTCTaGGTTCTGCAACTGAATCAC +
Preference number: 5 (lower is better)
Translates to: NARGTYREDDLQPSNGHVRRVLL*VLQLNH
Trigger: GTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCT...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTAAAAACAGGCGAGTTTaGCTCTTGGTTCTGCAACTG +
Preference number: 5 (lower is better)
Translates to: FPEASTEARPPWDSRGRGKNRRV*LLVLQL
Trigger: CAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTTTT...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCTTCACTCTGGAGTGTTaGAAGCTTCTGCCGGTTTGT +
Preference number: 5 (lower is better)
Translates to: NARGTYREDDLQPSNGHVFTLEC*KLLPVC
Trigger: ACAAACCGGCAGAAGCTTCAAACACTCCAGAGTGAA...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354574.8
ENST00000457474.6
CDS CCA 90 bp CCCCTGGGAGGGTCTTCTTGCACTCTGACTGCAGTCGGTAGGCACTaGACGTCAGTAAACGAAGGGAAGTCCTCACCATATCAGACTTGG +
Preference number: 5 (lower is better)
Translates to: PLGGSSCTLTAVGRH*TSVNEGKSSPYQTW
Trigger: CCAAGTCTGATATGGTGAGGACTTCCCTTCGTTTACTGACGTCCAGTGCCTACCGACTGCAGTCAGAGTGCAAGAAGACCCTCCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000546613.5
ENST00000550186.5
ENST00000551209.5
ENST00000552978.5
ENST00000553118.5
CDS-3UTR CAA 90 bp ACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCGCCTTCATAAAATCTGCCCTGCTTaGGAGGCAACATGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: TIHHVHSAQGPSLLVRLHKICPA*EATWSG
Trigger: CCCACTCCATGTTGCCTCCAAAGCAGGGCAGATTTT...ATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp GACATGGGCCTACTGCCCCGGGCAGACGGACGTCTCTTTAAGGAAGAGTGGTTGGGCTCTTCTGCCGGTTaGTTTTGCTTGCAGTGGTTT +
Preference number: 5 (lower is better)
Translates to: DMGLLPRADGRLFKEEWLGSSAG*FCLQWF
Trigger: AAACCACTGCAAGCAAAACAAACCGGCAGAAGAGCC...CAACCACTCTTCCTTAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTGTACTCAGAACCAGTTaGCACCTGATATACATTGGT +
Preference number: 5 (lower is better)
Translates to: FPEASTEARPPWDSRGRGVLRTS*HLIYIG
Trigger: ACCAATGTATATCAGGTGCAAACTGGTTCTGAGTAC...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTAGCTCCTGTATGTTTTaGGTGATCTGTTCAGTCTTC +
Preference number: 5 (lower is better)
Translates to: FPEASTEARPPWDSRGRGSSCMF*VICSVF
Trigger: GAAGACTGAACAGATCACCAAAAACATACAGGAGCT...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTCCCAGAAGCCTCTACAGAAGCCCGTCCTCCCTGGGACAGCAGGGGCAGGGGTTCAACTCAACAGTTGTaGACAACACAACCGAACATC +
Preference number: 5 (lower is better)
Translates to: FPEASTEARPPWDSRGRGSTQQL*TTQPNI
Trigger: GATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGA...ACCCCTGCCCCTGCTGTCCCAGGGAGGACGGGCTTCTGTAGAGGCTTCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCTCTCCCCTCAGCGCCTaGCAGCCTTGGCACAGCACG +
Preference number: 5 (lower is better)
Translates to: KQASFALGSATESLEKPCSPLSA*QPWHST
Trigger: CGTGCTGTGCCAAGGCTGCAAGGCGCTGAGGGGAGA...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354574.8
CDS GCA 90 bp CCCTTCCATGGGACGCATGGCCTCTCACCTTCTGCCGGTTTGTTTTaGTTGCAGTGGTTTCCAAATCTGTGTCTTCGTCTGATGCCACGC +
Preference number: 5 (lower is better)
Translates to: PFHGTHGLSPSAGLF*LQWFPNLCLRLMPR
Trigger: GCGTGGCATCAGACGAAGACACAGATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAAGGTGAGAGGCCATGCGTCCCATGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS CCA 90 bp TTGGGAGATATGGTTTCTGACCTGATCCGGTCTCGTACATGGACATaGGCCTACTGCCCCGGGCAGACGGACGTCTCTTTAAGGAAGAGT +
Preference number: 5 (lower is better)
Translates to: LGDMVSDLIRSRTWT*AYCPGQTDVSLRKS
Trigger: ACTCTTCCTTAAAGAGACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGACCGGATCAGGTCAGAAACCATATCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
ENST00000551209.5
CDS-3UTR CAA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGCAGGGCGCTGTGGTTTaGCGTGGCAAGCCAGACTGC +
Preference number: 5 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVQGAVV*RGKPDC
Trigger: GCAGTCTGGCTTGCCACGCAAAACCACAGCGCCCTG...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGAAAGGGGACGACCGTaGTCTCGGTTACCAGGGCGC +
Preference number: 5 (lower is better)
Translates to: KQASFALGSATESLEKPCERGRP*SRLPGR
Trigger: GCGCCCTGGTAACCGAGACAACGGTCGTCCCCTTTC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTGATGAGTACTCAGGATaGACCGGAAGAAAGGGGACG +
Preference number: 5 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFDEYSG*TGRKGT
Trigger: CGTCCCCTTTCTTCCGGTCAATCCTGAGTACTCATC...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCATTCTGCCGGTTTGTTTaGCTTGCAGTGGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPFCRFV*LAVVSK
Trigger: TTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAA...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCGCCTTCATTTTAGAGACTGTCACTaGGAGGCCCTGAATGCTCCT +
Preference number: 5 (lower is better)
Translates to: TIHHVHSAQGPSLLVRLHFRDCH*EALNAP
Trigger: AGGAGCATTCAGGGCCTCCAAGTGACAGTCTCTAAA...ATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp GAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTCTGGTGCCAGGGCTGGAATATTaGGCCTTTCTCTCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: ELTSSHGCSTQHACFRLVPGLEY*AFLSFG
Trigger: GCCAAAGGAGAGAAAGGCCAAATATTCCAGCCCTGG...CACCAGACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCAGCCACTAGAGCGTTTTaGACCTCCATAAATTCCTGT +
Preference number: 5 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPATRAF*TSINSC
Trigger: ACAGGAATTTATGGAGGTCAAAAACGCTCTAGTGGC...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR CAA 90 bp AATGCGCGGGGCACATACAGAGAGGACGACCTGCAGCCCTCCAATGGCCACGTCTCTTTGCTGCAGGTTTaGAACAAACTGTCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: NARGTYREDDLQPSNGHVSLLQV*NKLSGL
Trigger: TAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGA...GACGTGGCCATTGGAGGGCTGCAGGTCGTCCTCTCTGTATGTGCCCCGCGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACCTGGCTCCCTTCACTCATCCACATCACCGGCCCTAGGCCAGGGTCTGAACCAAGGCAACATCTTCTATaGCAGGTCCTCAAACATTCC +
Preference number: 5 (lower is better)
Translates to: TWLPSLIHITGPRPGSEPRQHLL*QVLKHS
Trigger: GGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCT...TGGTTCAGACCCTGGCCTAGGGCCGGTGATGTGGATGAGTGAAGGGAGCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTTCTCCCCTCAGCGCCTaGCAGCCTTGGCACAGCACG +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALSPLSA*QPWHST
Trigger: CGTGCTGTGCCAAGGCTGCAAGGCGCTGAGGGGAGA...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354574.8
ENST00000553118.5
CDS GCA 90 bp CTGGCTCCATGTCGTTGGGAGTGTTGTCGTAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCCTGGATGCCTACAAGAAAGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LAPCRWECCRSHSQV*CSASPAWMPTRKKR
Trigger: CCTCTTCTTTCTTGTAGGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACTACGACAACACTCCCAACGACATGGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550480.1
CDS-3UTR CAA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCACCATCTGAAGCAGTGTaGGAGGCCACGGTGTGTGTT +
Preference number: 5 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPPSEAV*EATVCV
Trigger: AACACACACCGTGGCCTCCAACACTGCTTCAGATGG...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGGGTCAGAAAATCTGCCCTGCTTaGGAGGCAACATGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: SSHAGCSMVLDGLELRGQKICPA*EATWSG
Trigger: CCCACTCCATGTTGCCTCCAAAGCAGGGCAGATTTT...CTGACCCCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAACAGGGCGCTGTGGTTTaGCGTGGCAAGCCAGACTGC +
Preference number: 5 (lower is better)
Translates to: QNGCSKQEREELSHSEQEQGAVV*RGKPDC
Trigger: GCAGTCTGGCTTGCCACGCAAAACCACAGCGCCCTG...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTGAAAGGGGACGACCGTaGTCTCGGTTACCAGGGCGC +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALERGRP*SRLPGR
Trigger: GCGCCCTGGTAACCGAGACAACGGTCGTCCCCTTTC...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp ACCTGCAGCCCTCCAATGGCCACGTCATTCCACCGGGGAACTTGTTTGGAGTTTGCTCCACATTGTCTTTaGAACCCGAGAGAGAACTGC +
Preference number: 5 (lower is better)
Translates to: TCSPPMATSFHRGTCLEFAPHCL*NPRENC
Trigger: GCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAGC...AAACTCCAAACAAGTTCCCCGGTGGAATGACGTGGCCATTGGAGGGCTGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCGGCTCTTCTGCCGGTTaGTTTTGCTTGCAGTGGTTT +
Preference number: 5 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGGSSAG*FCLQWF
Trigger: AAACCACTGCAAGCAAAACAAACCGGCAGAAGAGCC...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR CAA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCCCTGGGAGGGTCTTCTaGCACTCTGACTGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: KQASFALGSATESLEKPCPGRVF*HSDCSR
Trigger: CCGACTGCAGTCAGAGTGCAAGAAGACCCTCCCAGG...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGCACCGGGGAACTTGTTaGGAGTTTTGGCACCGTGGG +
Preference number: 5 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWHRGTC*EFWHRG
Trigger: CCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTG...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GGTCCTTCCCTTCTGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTGGGTGGGGCTGGGAAATGTTaGCAGGCAAGCTGTACACTG +
Preference number: 5 (lower is better)
Translates to: GPSLLVRLHLPWTFYKLGGAGKC*QASCTL
Trigger: CAGTGTACAGCTTGCCTGCAAACATTTCCCAGCCCC...ACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGACTCGAATGGAGTTGCTaGCTAAGATCTTTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRLEWSC*LRSLAV
Trigger: GACTGCCAAAGATCTTAGCAAGCAACTCCATTCGAG...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCAAAATCTGCCCTGCTTaGGAGGCAACATGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSKICPA*EATWSG
Trigger: CCCACTCCATGTTGCCTCCAAAGCAGGGCAGATTTT...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAGGTGCCCTCCTTGCCTaGCATAATCAACGGGAGTTT +
Preference number: 5 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPGALLA*HNQREF
Trigger: AAACTCCCGTTGATTATGCAAGGCAAGGAGGGCACC...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCGGTGCCCTCCTTGCCTaGCATAATCAACGGGAGTTT +
Preference number: 5 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSGALLA*HNQREF
Trigger: AAACTCCCGTTGATTATGCAAGGCAAGGAGGGCACC...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTCCATTCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGCTCATGGTGCCCTCCTaGCCTTGCATAATCAACGGG +
Preference number: 5 (lower is better)
Translates to: FHSSHAGCSMVLDGLELRLMVPS*PCIING
Trigger: CCCGTTGATTATGCAAGGCAAGGAGGGCACCATGAG...CCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGAATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGCTCATGGTGCCCTCCTaGCCTTGCATAATCAACGGG +
Preference number: 5 (lower is better)
Translates to: LLFAAGFEQTVWLTGVRELMVPS*PCIING
Trigger: CCCGTTGATTATGCAAGGCAAGGAGGGCACCATGAG...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCAGGGCGCTGTGGTTTaGCGTGGCAAGCCAGACTGC +
Preference number: 5 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDQGAVV*RGKPDC
Trigger: GCAGTCTGGCTTGCCACGCAAAACCACAGCGCCCTG...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGGGGCTGATCGTTGTCTaGACTCTCAACGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: LLFAAGFEQTVWLTGVREGLIVV*TLNAVL
Trigger: CAGCACAGCGTTGAGAGTCAAGACAACGATCAGCCC...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGCGCCTTCATTTCTGCCGGTTTGTTTaGCTTGCAGTGGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: TIHHVHSAQGPSLLVRLHFCRFV*LAVVSK
Trigger: TTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAA...ATGAAGGCGCACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGCCTGGGAGGGTCTTCTaGCACTCTGACTGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKPGRVF*HSDCSR
Trigger: CCGACTGCAGTCAGAGTGCAAGAAGACCCTCCCAGG...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCCTGGGAGGGTCTTCTaGCACTCTGACTGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALPGRVF*HSDCSR
Trigger: CCGACTGCAGTCAGAGTGCAAGAAGACCCTCCCAGG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGTCTTTGCTGCAGGTTTaGAACAAACTGTCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRSLLQV*NKLSGL
Trigger: TAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGA...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAAAGTGGAAGAGTCTTTaGGAGACGTGGACCCTTTTC +
Preference number: 5 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRKWKSL*ETWTLF
Trigger: GAAAAGGGTCCACGTCTCCAAAAGACTCTTCCACTT...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCATTCCACCGGGGAACTaGTTTGGAGTTTTGGCACCG +
Preference number: 5 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSIPPGN*FGVLAP
Trigger: CGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAAT...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAAGGCGAGTTTTGCTCTaGGTTCTGCAACTGAATCAC +
Preference number: 5 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRRRVLL*VLQLNH
Trigger: GTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCT...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCAGGCGAGTTTTGCTCTaGGTTCTGCAACTGAATCAC +
Preference number: 5 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGRRVLL*VLQLNH
Trigger: GTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCT...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS GCA 90 bp GCTGCCCCTCTGCTTCTAGGAGCCACTTTGTATGCACTGGCTAAATaGATGAGCAGGCTGGTCTCGTCATTTCCTTTATCCTGTCTAGCA +
Preference number: 5 (lower is better)
Translates to: AAPLLLGATLYALAK*MSRLVSSFPLSCLA
Trigger: TGCTAGACAGGATAAAGGAAATGACGAGACCAGCCTGCTCATGCATTTAGCCAGTGCATACAAAGTGGCTCCTAGAAGCAGAGGGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552978.5
CDS GCA 90 bp AGGCCACAAAGTCTGCAGAAAAACAGGACCAAGCACCAGGTCTCCTaGCTCCTGCTACCTCCAATATTTCATGCCTGGGCTCAAATCTAC +
Preference number: 5 (lower is better)
Translates to: RPQSLQKNRTKHQVS*LLLPPIFHAWAQIY
Trigger: GTAGATTTGAGCCCAGGCATGAAATATTGGAGGTAGCAGGAGGCAGGAGACCTGGTGCTTGGTCCTGTTTTTCTGCAGACTTTGTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548655.5
CDS-3UTR CAA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCCCATCTGAAGCAGTGTaGGAGGCCACGGTGTGTGTT +
Preference number: 5 (lower is better)
Translates to: KQASFALGSATESLEKPCPSEAV*EATVCV
Trigger: AACACACACCGTGGCCTCCAACACTGCTTCAGATGG...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGATGCTTGCTAAGATCTTaGGCAGTCACACTATCGTCA +
Preference number: 5 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRCLLRS*AVTLSS
Trigger: TGACGATAGTGTGACTGCCAAAGATCTTAGCAAGCA...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTACTCGAATGGAGTTGCTaGCTAAGATCTTTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLLEWSC*LRSLAV
Trigger: GACTGCCAAAGATCTTAGCAAGCAACTCCATTCGAG...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTGGTTGTGAAAGGGGACGACCGTaGTCTCGGTTACCAGGGCGC +
Preference number: 5 (lower is better)
Translates to: VGSVCVLRTSLHLIYIGCERGRP*SRLPGR
Trigger: GCGCCCTGGTAACCGAGACAACGGTCGTCCCCTTTC...ACAACCAATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp GTGAGTGATCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTCTCCTTTGGGATGAGTACTCAGGATaGACCGGAAGAAAGGGGACG +
Preference number: 5 (lower is better)
Translates to: VSDHLSARAGIFGLSLLWDEYSG*TGRKGT
Trigger: CGTCCCCTTTCTTCCGGTCAATCCTGAGTACTCATC...CCAAAGGAGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCGCTCCACATTGTCTTTaGAACCCGAGAGAGAACTGC +
Preference number: 5 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSAPHCL*NPRENC
Trigger: GCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAGC...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAAGTATGAGCTCCACATaGTCTTTTGAACCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRSMSST*SFEPER
Trigger: TCTCTCGGGTTCAAAAGACAATGTGGAGCTCATACT...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGGGCTGATCGTTGTCTaGACTCTCAACGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: KQASFALGSATESLEKPCGLIVV*TLNAVL
Trigger: CAGCACAGCGTTGAGAGTCAAGACAACGATCAGCCC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGCCGGTTTGTTTTGCTaGCAGTGGTTTCCAAATCTG +
Preference number: 5 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLAGLFC*QWFPNL
Trigger: CAGATTTGGAAACCACTGCAAGCAAAACAAACCGGC...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGGGTCAGGCCGGTTTGTTTTGCTaGCAGTGGTTTCCAAATCTG +
Preference number: 5 (lower is better)
Translates to: SSHAGCSMVLDGLELRGQAGLFC*QWFPNL
Trigger: CAGATTTGGAAACCACTGCAAGCAAAACAAACCGGC...CTGACCCCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp CCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTGCACCAGAAGATCACCAGGGCTGGAATATTaGGCCTTTCTCTCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: PHQCQGLSPQATVCTRRSPGLEY*AFLSFG
Trigger: GCCAAAGGAGAGAAAGGCCAAATATTCCAGCCCTGG...TGATCTTCTGGTGCAAACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCCCTGGGAGGGTCTTCTaGCACTCTGACTGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIPGRVF*HSDCSR
Trigger: CCGACTGCAGTCAGAGTGCAAGAAGACCCTCCCAGG...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGATTCCACCGGGGAACTaGTTTGGAGTTTTGGCACCG +
Preference number: 5 (lower is better)
Translates to: LLFAAGFEQTVWLTGVREIPPGN*FGVLAP
Trigger: CGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAAT...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AACACACAGGGTTGGCCGGCTCCATTACGGGTAAGACTCAGAGGCTGCTCCAGGGCAAATAAGAACTATTaGCATTCCAAGGCAGATGAC +
Preference number: 5 (lower is better)
Translates to: NTQGWPAPLRVRLRGCSRANKNY*HSKADD
Trigger: GTCATCTGCCTTGGAATGCAAATAGTTCTTATTTGC...CCTGGAGCAGCCTCTGAGTCTTACCCGTAATGGAGCCGGCCAACCCTGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGCTGCAACTGAATCACTaGAGAAGCCGTGCACAGCTC +
Preference number: 5 (lower is better)
Translates to: LLFAAGFEQTVWLTGVRELQLNH*RSRAQL
Trigger: GAGCTGTGCACGGCTTCTCAAGTGATTCAGTTGCAG...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS CCA 90 bp CTCTTCTCAGGAGTCTTCCCCAGGAATTGTTACCTGTTAGGCTACTaGCCTTCACATCCCAAATCTCATTTGGGACAGGGGACAACTCTC +
Preference number: 5 (lower is better)
Translates to: LFSGVFPRNCYLLGY*PSHPKSHLGQGTTL
Trigger: GAGAGTTGTCCCCTGTCCCAAATGAGATTTGGGATGTGAAGGCCAGTAGCCTAACAGGTAACAATTCCTGGGGAAGACTCCTGAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550480.1
CDS-3UTR CAA 90 bp ATCTTCCATGGACATTCTATAAGCTGGGTGTGGTGTGAGTTCAGCTGTCTACTCCCATCTGAAGCAGTGTaGGAGGCCACGGTGTGTGTT +
Preference number: 5 (lower is better)
Translates to: IFHGHSISWVWCEFSCLLPSEAV*EATVCV
Trigger: AACACACACCGTGGCCTCCAACACTGCTTCAGATGG...GAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCCATCTGAAGCAGTGTaGGAGGCCACGGTGTGTGTT +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALPSEAV*EATVCV
Trigger: AACACACACCGTGGCCTCCAACACTGCTTCAGATGG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTGGTGCCCTCCTTGCCTaGCATAATCAACGGGAGTTT +
Preference number: 5 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLGALLA*HNQREF
Trigger: AAACTCCCGTTGATTATGCAAGGCAAGGAGGGCACC...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGGTGCCCTCCTTGCCTaGCATAATCAACGGGAGTTT +
Preference number: 5 (lower is better)
Translates to: KQASFALGSATESLEKPCGALLA*HNQREF
Trigger: AAACTCCCGTTGATTATGCAAGGCAAGGAGGGCACC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCTCATGGTGCCCTCCTaGCCTTGCATAATCAACGGG +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALLMVPS*PCIING
Trigger: CCCGTTGATTATGCAAGGCAAGGAGGGCACCATGAG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAACTCATGGTGCCCTCCTaGCCTTGCATAATCAACGGG +
Preference number: 5 (lower is better)
Translates to: QNGCSKQEREELSHSEQELMVPS*PCIING
Trigger: CCCGTTGATTATGCAAGGCAAGGAGGGCACCATGAG...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGGGTCAGGCTGCTGTCTGCCATTaGAGGTATTATAAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: SSHAGCSMVLDGLELRGQAAVCH*RYYKVL
Trigger: CAGCACTTTATAATACCTCAAATGGCAGACAGCAGC...CTGACCCCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGGATGAGTACTCAGGATaGACCGGAAGAAAGGGGACG +
Preference number: 5 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLDEYSG*TGRKGT
Trigger: CGTCCCCTTTCTTCCGGTCAATCCTGAGTACTCATC...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAGGACATGAAGCCTGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGCTCCACATTGTCTTTaGAACCCGAGAGAGAACTGC +
Preference number: 5 (lower is better)
Translates to: KDMKPAEKAIRWRLNLRWAPHCL*NPRENC
Trigger: GCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAGC...CCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCAGGCTTCATGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCGGGCTGATCGTTGTCTaGACTCTCAACGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLGLIVV*TLNAVL
Trigger: CAGCACAGCGTTGAGAGTCAAGACAACGATCAGCCC...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCCGTGCCGGTTTGTTTTGCTaGCAGTGGTTTCCAAATCTG +
Preference number: 5 (lower is better)
Translates to: SMELTSSHGCSTQHACFRAGLFC*QWFPNL
Trigger: CAGATTTGGAAACCACTGCAAGCAAAACAAACCGGC...ACGGAAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp GGTCCTTCCCTTCTGGTGCGCCTTCATCTTCCATGGACATTCTATAAGCTGGGTGCAACTTCTGCCGGTTaGTTTTGCTTGCAGTGGTTT +
Preference number: 5 (lower is better)
Translates to: GPSLLVRLHLPWTFYKLGATSAG*FCLQWF
Trigger: AAACCACTGCAAGCAAAACAAACCGGCAGAAGTTGC...ACCCAGCTTATAGAATGTCCATGGAAGATGAAGGCGCACCAGAAGGGAAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320063.10
CDS-3UTR CAA 90 bp CACGTCATTCCACCGGGGAACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGTACTCAGAACCAGTTaGCACCTGATATACATTGGT +
Preference number: 5 (lower is better)
Translates to: HVIPPGNLFGVLAPWANRVLRTS*HLIYIG
Trigger: ACCAATGTATATCAGGTGCAAACTGGTTCTGAGTAC...TCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAATGACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCGGCTCGCTTCTCCCATaGGGAGATATGGTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: KQASFALGSATESLEKPCGSLLP*GDMVSD
Trigger: GTCAGAAACCATATCTCCCAATGGGAGAAGCGAGCC...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCGGCGGTGCCCTGCCCTaGTCAGTTGTTGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLGGALP*SVVVLF
Trigger: AAAGAGAACAACAACTGACAAGGGCAGGGCACCGCC...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAAGGCGGTGCCCTGCCCTaGTCAGTTGTTGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: QNGCSKQEREELSHSEQEGGALP*SVVVLF
Trigger: AAAGAGAACAACAACTGACAAGGGCAGGGCACCGCC...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGTGGTCCCCATGTTCCTaGACTTTCTCTAGGGCCATA +
Preference number: 5 (lower is better)
Translates to: LLFAAGFEQTVWLTGVREWSPCS*TFSRAI
Trigger: TATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCA...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCACTGGAAATGCTTTGTaGGTCCCCATGTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSTGNAL*VPMFLD
Trigger: GTCAAGGAACATGGGGACCAACAAAGCATTTCCAGT...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAACTGGAAATGCTTTGTaGGTCCCCATGTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPTGNAL*VPMFLD
Trigger: GTCAAGGAACATGGGGACCAACAAAGCATTTCCAGT...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCCATGAAATGCTGTGTTaGATCTTTGGGCCCAATTCA +
Preference number: 5 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGHEMLC*IFGPNS
Trigger: TGAATTGGGCCCAAAGATCAAACACAGCATTTCATG...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCGAAGCTTCTGCCGGTTaGTTTTGCTTGCAGTGGTTT +
Preference number: 5 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSEASAG*FCLQWF
Trigger: AAACCACTGCAAGCAAAACAAACCGGCAGAAGCTTC...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354574.8
ENST00000457474.6
CDS TCA 90 bp GCCATCCCCTGGCCACACCATACTTCTTTGCCGTCCCTTTCGGCTTaGCCTGTGAACATTAAAGATGCAGTTAAATACAGCAGGTGCTTA +
Preference number: 5 (lower is better)
Translates to: AIPWPHHTSLPSLSA*PVNIKDAVKYSRCL
Trigger: TAAGCACCTGCTGTATTTAACTGCATCTTTAATGTTCACAGGTCAAGCCGAAAGGGACGGCAAAGAAGTATGGTGTGGCCAGGGGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552978.5
CDS TCA 90 bp ACTCTGGATAAGAGTCTAGTAACCACTTCAAAGGCTTCAAATCAGTaGGAGACACGCCAACCTAACGCACAGCTCACGCCTGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: TLDKSLVTTSKASNQ*ETRQPNAQLTPAAT
Trigger: AGTAGCTGCAGGCGTGAGCTGTGCGTTAGGTTGGCGTGTCTCTCACTGATTTGAAGCCTTTGAAGTGGTTACTAGACTCTTATCCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS TCA 90 bp TGCTTCTCCAGCCTGGATGCCTACAAGAAAGAAGAGGGACCCTCATaGGTTTGTAACATGAGACTCTTCTCAGGAGTCTTCCCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: CFSSLDAYKKEEGPS*VCNMRLFSGVFPRN
Trigger: ATTCCTGGGGAAGACTCCTGAGAAGAGTCTCATGTTACAAACTCATGAGGGTCCCTCTTCTTTCTTGTAGGCATCCAGGCTGGAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550480.1
CDS CCA 90 bp TTTACTGATGCCCAGGAAGGATCTGGAAAGAGAGTGAAATCTCAGTaGCAGGGATACCAGCAGGTTGCTATACCGCCAGATGGCAAAAGA +
Preference number: 5 (lower is better)
Translates to: FTDAQEGSGKRVKSQ*QGYQQVAIPPDGKR
Trigger: TCTTTTGCCATCTGGCGGTATAGCAACCTGCTGGTATCCCTGCCACTGAGATTTCACTCTCTTTCCAGATCCTTCCTGGGCATCAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547267.2
CDS CCA 90 bp TGTTGTCGTAGTCACTCTCAGGTGTGCTGTTCTGCTTCTCCAGCCTaGATGCCTACAAGAAAGAAGAGGGACCCTCATGAGTTTGTAACA +
Preference number: 5 (lower is better)
Translates to: CCRSHSQVCCSASPA*MPTRKKRDPHEFVT
Trigger: TGTTACAAACTCATGAGGGTCCCTCTTCTTTCTTGTAGGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACTACGACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550480.1
CDS-3UTR CAA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCAAAATCTGCCCTGCTTaGGAGGCAACATGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLKICPA*EATWSG
Trigger: CCCACTCCATGTTGCCTCCAAAGCAGGGCAGATTTT...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTACTCATGGTGCCCTCCTaGCCTTGCATAATCAACGGG +
Preference number: 5 (lower is better)
Translates to: MLLTVKQNATKASTHGDLLMVPS*PCIING
Trigger: CCCGTTGATTATGCAAGGCAAGGAGGGCACCATGAG...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCTCATGGTGCCCTCCTaGCCTTGCATAATCAACGGG +
Preference number: 5 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDLMVPS*PCIING
Trigger: CCCGTTGATTATGCAAGGCAAGGAGGGCACCATGAG...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACAGGGCGCTGTGGTTTaGCGTGGCAAGCCAGACTGC +
Preference number: 5 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKQGAVV*RGKPDC
Trigger: GCAGTCTGGCTTGCCACGCAAAACCACAGCGCCCTG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGGATGAGTACTCAGGATaGACCGGAAGAAAGGGGACG +
Preference number: 5 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKDEYSG*TGRKGT
Trigger: CGTCCCCTTTCTTCCGGTCAATCCTGAGTACTCATC...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGGCTCCACATTGTCTTTaGAACCCGAGAGAGAACTGC +
Preference number: 5 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVAPHCL*NPRENC
Trigger: GCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAGC...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CCACCCCATTTTAGAGACTGTCACTTGGAGGCCCTGAATGCTCCTTCCATTCCTAGTATGAGCTCCACATaGTCTTTTGAACCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: PPHFRDCHLEALNAPSIPSMSST*SFEPER
Trigger: TCTCTCGGGTTCAAAAGACAATGTGGAGCTCATACT...AGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGACAGTCTCTAAAATGGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACGGGCTGATCGTTGTCTaGACTCTCAACGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDGLIVV*TLNAVL
Trigger: CAGCACAGCGTTGAGAGTCAAGACAACGATCAGCCC...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp CCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTGCACCAGAAGATCATCAGTGGTGTCAGCTTaGAACATGCTAATCTGCCTG +
Preference number: 5 (lower is better)
Translates to: PHQCQGLSPQATVCTRRSSVVSA*NMLICL
Trigger: CAGGCAGATTAGCATGTTCAAAGCTGACACCACTGA...TGATCTTCTGGTGCAAACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCGGCTCGCTTCTCCCATaGGGAGATATGGTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLGSLLP*GDMVSD
Trigger: GTCAGAAACCATATCTCCCAATGGGAGAAGCGAGCC...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCAGGCAACATCTTCTATaGCAGGTCCTCAAACATTCC +
Preference number: 5 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSRQHLL*QVLKHS
Trigger: GGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCT...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGTGGTCCCCATGTTCCTaGACTTTCTCTAGGGCCATA +
Preference number: 5 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVWSPCS*TFSRAI
Trigger: TATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCA...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTATTCCACCGGGGAACTaGTTTGGAGTTTTGGCACCG +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALIPPGN*FGVLAP
Trigger: CGGTGCCAAAACTCCAAACAAGTTCCCCGGTGGAAT...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCTCTGCCCTATCAGCTTaGGGGGAAGGGTGGCATATG +
Preference number: 5 (lower is better)
Translates to: THEVMEEKLTQMTAIRYISALSA*GEGWHM
Trigger: CATATGCCACCCTTCCCCCAAAGCTGATAGGGCAGA...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGAAGGCGCAAATAAGAACTATTaGCATTCCAAGGCAGATGAC +
Preference number: 5 (lower is better)
Translates to: KGYQMAPELKVGGPLLEGANKNY*HSKADD
Trigger: GTCATCTGCCTTGGAATGCAAATAGTTCTTATTTGC...GCCTTCTAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGCTGCAACTGAATCACTaGAGAAGCCGTGCACAGCTC +
Preference number: 5 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKLQLNH*RSRAQL
Trigger: GAGCTGTGCACGGCTTCTCAAGTGATTCAGTTGCAG...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TGCGATTTGCCAACAGGAGCAGAGAACTCTGACACCAGATCTCAGATGAGGCCAAAAAACAGGCGAGTTTaGCTCTTGGTTCTGCAACTG +
Preference number: 5 (lower is better)
Translates to: CDLPTGAENSDTRSQMRPKNRRV*LLVLQL
Trigger: CAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTTTT...TGGCCTCATCTGAGATCTGGTGTCAGAGTTCTCTGCTCCTGTTGGCAAATCGCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAAAGCTCATGGGTGCCATaGAGGACAAAAACAGGCGAG +
Preference number: 5 (lower is better)
Translates to: QNGCSKQEREELSHSEQESSWVP*RTKTGE
Trigger: CTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCT...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTAGCTCATGGGTGCCATaGAGGACAAAAACAGGCGAG +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALSSWVP*RTKTGE
Trigger: CTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCT...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS TCA 90 bp CCTGGCCACACCATACTTCTTTGCCGTCCCTTTCGGCTTGACCTGTaGACATTAAAGATGCAGTTAAATACAGCAGGTGCTTATCAGCTG +
Preference number: 5 (lower is better)
Translates to: PGHTILLCRPFRLDL*TLKMQLNTAGAYQL
Trigger: CAGCTGATAAGCACCTGCTGTATTTAACTGCATCTTTAATGTTCACAGGTCAAGCCGAAAGGGACGGCAAAGAAGTATGGTGTGGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552978.5
CDS-3UTR CAA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTCTCGAATGGAGTTGCTaGCTAAGATCTTTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLLEWSC*LRSLAV
Trigger: GACTGCCAAAGATCTTAGCAAGCAACTCCATTCGAG...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCAAAATCTGCCCTGCTTaGGAGGCAACATGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIKICPA*EATWSG
Trigger: CCCACTCCATGTTGCCTCCAAAGCAGGGCAGATTTT...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTGGTGCCCTCCTTGCCTaGCATAATCAACGGGAGTTT +
Preference number: 5 (lower is better)
Translates to: KSDQIPHQCQGLSPQATVGALLA*HNQREF
Trigger: AAACTCCCGTTGATTATGCAAGGCAAGGAGGGCACC...AACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp AAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTGATGAGTACTCAGGATaGACCGGAAGAAAGGGGACG +
Preference number: 5 (lower is better)
Translates to: KSDQIPHQCQGLSPQATVDEYSG*TGRKGT
Trigger: CGTCCCCTTTCTTCCGGTCAATCCTGAGTACTCATC...AACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGAGTATGAGCTCCACATaGTCTTTTGAACCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: LLFAAGFEQTVWLTGVRESMSST*SFEPER
Trigger: TCTCTCGGGTTCAAAAGACAATGTGGAGCTCATACT...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCATTAGCTGCTGTATCTaGGCCTCAGAAGCCACTAGA +
Preference number: 5 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFISCCI*ASEATR
Trigger: TCTAGTGGCTTCTGAGGCCAAGATACAGCAGCTAAT...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR CAA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACCTGGGAGGGTCTTCTaGCACTCTGACTGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKPGRVF*HSDCSR
Trigger: CCGACTGCAGTCAGAGTGCAAGAAGACCCTCCCAGG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp CTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGGGAGACAACTGGAAATGCTTaGTTGGTCCCCATGTTCCTT +
Preference number: 5 (lower is better)
Translates to: LLFAAGFEQTVWLTGVRETTGNA*LVPMFL
Trigger: AAGGAACATGGGGACCAACAAAGCATTTCCAGTTGT...CTCCCTCACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTCACCGGGGAACTTGTTaGGAGTTTTGGCACCGTGGG +
Preference number: 5 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLHRGTC*EFWHRG
Trigger: CCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTG...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCAGATAAGGTGCGATTaGCCAACAGGAGCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALQIRCD*PTGAEN
Trigger: GTTCTCTGCTCCTGTTGGCAAATCGCACCTTATCTG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGCAGATAAGGTGCGATTaGCCAACAGGAGCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKQIRCD*PTGAEN
Trigger: GTTCTCTGCTCCTGTTGGCAAATCGCACCTTATCTG...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TGCAGAAAAGGCTATCAGATGGCGCCTGAACTTAAGGTGGGAGGCCCCCTTCTAGCAAATAAGAACTATTaGCATTCCAAGGCAGATGAC +
Preference number: 5 (lower is better)
Translates to: CRKGYQMAPELKVGGPLLANKNY*HSKADD
Trigger: GTCATCTGCCTTGGAATGCAAATAGTTCTTATTTGC...TAGAAGGGGGCCTCCCACCTTAAGTTCAGGCGCCATCTGATAGCCTTTTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGAGGCGAGTTTTGCTCTaGGTTCTGCAACTGAATCAC +
Preference number: 5 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLRRVLL*VLQLNH
Trigger: GTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CCACCCCATTTTAGAGACTGTCACTTGGAGGCCCTGAATGCTCCTTCCATTCCTCTGAATGTGGAAAAGTaGTGGTTTGGACTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: PPHFRDCHLEALNAPSIPLNVEK*WFGLPQ
Trigger: TTGAGGAAGTCCAAACCACAACTTTTCCACATTCAG...AGGAATGGAAGGAGCATTCAGGGCCTCCAAGTGACAGTCTCTAAAATGGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS TCA 90 bp CAGAACCAGTTTGCACCTGATATACATTGGTTGTGGCCTGTTTCCTaGGGTTCGAATTTTCACTCTGGAGTGTTTGAAGCTTCTGCCGGT +
Preference number: 5 (lower is better)
Translates to: QNQFAPDIHWLWPVS*GSNFHSGVFEASAG
Trigger: ACCGGCAGAAGCTTCAAACACTCCAGAGTGAAAATTCGAACCTCAGGAAACAGGCCACAACCAATGTATATCAGGTGCAAACTGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000457474.6
ENST00000551209.5
CDS GCA 90 bp GTTAGCTCATACTGTATTTCCACGAGGCGCTCTGCCAGCTCATGGTaGCCTCCTTGCCTACCAAGAGAAAACAAAGTACCATTTATATTG +
Preference number: 5 (lower is better)
Translates to: VSSYCISTRRSASSW*PPCLPRENKVPFIL
Trigger: CAATATAAATGGTACTTTGTTTTCTCTTGGTAGGCAAGGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGAAATACAGTATGAGCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS-3UTR CAA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTTGCTTGCTAAGATCTTaGGCAGTCACACTATCGTCA +
Preference number: 5 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLCLLRS*AVTLSS
Trigger: TGACGATAGTGTGACTGCCAAAGATCTTAGCAAGCA...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTCTCGAATGGAGTTGCTaGCTAAGATCTTTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALLEWSC*LRSLAV
Trigger: GACTGCCAAAGATCTTAGCAAGCAACTCCATTCGAG...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACGCTCCACATTGTCTTTaGAACCCGAGAGAGAACTGC +
Preference number: 5 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDAPHCL*NPRENC
Trigger: GCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAGC...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp AAACAGGCGAGTTTTGCTCTTGGTTCTGCAACTGAATCACTTGAGAAGCCGTGCAGTATGAGCTCCACATaGTCTTTTGAACCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: KQASFALGSATESLEKPCSMSST*SFEPER
Trigger: TCTCTCGGGTTCAAAAGACAATGTGGAGCTCATACT...GCACGGCTTCTCAAGTGATTCAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGTTCTGCCGGTTTGTTTaGCTTGCAGTGGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVFCRFV*LAVVSK
Trigger: TTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAA...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTCCATTCCTCACATGCAGGCTGCTCCATGGTGCTGGATGGATTAGAGTTAAGGTCCACAAGCAACTGTTaGCACCAGAAGATCATTACT +
Preference number: 5 (lower is better)
Translates to: FHSSHAGCSMVLDGLELRSTSNC*HQKIIT
Trigger: AGTAATGATCTTCTGGTGCAAACAGTTGCTTGTGGA...CCTTAACTCTAATCCATCCAGCACCATGGAGCAGCCTGCATGTGAGGAATGGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp ATCTTCCATGGACATTCTATAAGCTGGGTGTGGTGTGAGTTCAGCTGTCTACTCTCAGTGGTGTCAGCTTaGAACATGCTAATCTGCCTG +
Preference number: 5 (lower is better)
Translates to: IFHGHSISWVWCEFSCLLSVVSA*NMLICL
Trigger: CAGGCAGATTAGCATGTTCAAAGCTGACACCACTGA...GAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTGCCACTAGAGCGTTTTaGACCTCCATAAATTCCTGT +
Preference number: 5 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLATRAF*TSINSC
Trigger: ACAGGAATTTATGGAGGTCAAAAACGCTCTAGTGGC...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp GCATGTTCCAGCACTTCAACCTTACTCTTTCAGAGCTTTGGGGTAGCAGGCAGCGAGGCAACTTGTACTTaGATTCTTGTGTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ACSSTSTLLFQSFGVAGSEATCT*ILVSSS
Trigger: TGAAGAAGACACAAGAATCAAAGTACAAGTTGCCTC...GCTGCCTGCTACCCCAAAGCTCTGAAAGAGTAAGGTTGAAGTGCTGGAACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAAAAGTGGAAGAGTCTTTaGGAGACGTGGACCCTTTTC +
Preference number: 5 (lower is better)
Translates to: QNGCSKQEREELSHSEQEKWKSL*ETWTLF
Trigger: GAAAAGGGTCCACGTCTCCAAAAGACTCTTCCACTT...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCAGGCAACATCTTCTATaGCAGGTCCTCAAACATTCC +
Preference number: 5 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFRQHLL*QVLKHS
Trigger: GGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCT...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGCACCGGGGAACTTGTTaGGAGTTTTGGCACCGTGGG +
Preference number: 5 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQHRGTC*EFWHRG
Trigger: CCCACGGTGCCAAAACTCCAAACAAGTTCCCCGGTG...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTACAGATAAGGTGCGATTaGCCAACAGGAGCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: MLLTVKQNATKASTHGDLQIRCD*PTGAEN
Trigger: GTTCTCTGCTCCTGTTGGCAAATCGCACCTTATCTG...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GTGAGTGATCATCTTTCGGCCAGGGCTGGAATATTTGGCCTTTCTCTCCTTTGGATGACTAGGGTTGCTTaGCAAAGCAAGAAAGACAGA +
Preference number: 5 (lower is better)
Translates to: VSDHLSARAGIFGLSLLWMTRVA*QSKKDR
Trigger: TCTGTCTTTCTTGCTTTGCAAAGCAACCCTAGTCAT...CCAAAGGAGAGAAAGGCCAAATATTCCAGCCCTGGCCGAAAGATGATCACTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS GCA 90 bp TTAGTGCTCTGTGAAATAATGAAGCACCATGCAATACTGTACTCCTaGTGTTATTCCCAGACCCACTCTGTTCTTTCCAGTCAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LVLCEIMKHHAILYS*CYSQTHSVLSSQVS
Trigger: GGAGACCTGACTGGAAAGAACAGAGTGGGTCTGGGAATAACAGCAGGAGTACAGTATTGCATGGTGCTTCATTATTTCACAGAGCACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS GCA 90 bp TACTGTATTTCCACGAGGCGCTCTGCCAGCTCATGGTGCCCTCCTTaGCTACCAAGAGAAAACAAAGTACCATTTATATTGCTCACTATT +
Preference number: 5 (lower is better)
Translates to: YCISTRRSASSWCPP*LPRENKVPFILLTI
Trigger: AATAGTGAGCAATATAAATGGTACTTTGTTTTCTCTTGGTAGGCAAGGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGAAATACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS CCA 90 bp GAAATCTCAGTGGCAGGGATACCAGCAGGTTGCTATACCGCCAGATaGCAAAAGATGACTGAAGTTTGGTTTGTCAGAAAAAGGAGACAT +
Preference number: 5 (lower is better)
Translates to: EISVAGIPAGCYTAR*QKMTEVWFVRKRRH
Trigger: ATGTCTCCTTTTTCTGACAAACCAAACTTCAGTCATCTTTTGCCATCTGGCGGTATAGCAACCTGCTGGTATCCCTGCCACTGAGATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547267.2
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTAGTATGAGCTCCACATaGTCTTTTGAACCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALSMSST*SFEPER
Trigger: TCTCTCGGGTTCAAAAGACAATGTGGAGCTCATACT...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAGGGCTGATCGTTGTCTaGACTCTCAACGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQGLIVV*TLNAVL
Trigger: CAGCACAGCGTTGAGAGTCAAGACAACGATCAGCCC...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCGCCGGTTTGTTTTGCTaGCAGTGGTTTCCAAATCTG +
Preference number: 5 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIAGLFC*QWFPNL
Trigger: CAGATTTGGAAACCACTGCAAGCAAAACAAACCGGC...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTTTCTGCCGGTTTGTTTaGCTTGCAGTGGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALFCRFV*LAVVSK
Trigger: TTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAA...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGGAATCGTGTTACTCTTaGGCATCTGGCATTTTAAAC +
Preference number: 5 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVESCYS*ASGILN
Trigger: GTTTAAAATGCCAGATGCCAAAGAGTAACACGATTC...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp AGAGTGGTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTTTTAGAGACTGTCACTaGGAGGCCCTGAATGCTCCT +
Preference number: 5 (lower is better)
Translates to: RVVGSVCVLRTSLHLIYIFRDCH*EALNAP
Trigger: AGGAGCATTCAGGGCCTCCAAGTGACAGTCTCTAAA...AATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAACCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTGCCACTAGAGCGTTTTaGACCTCCATAAATTCCTGT +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALATRAF*TSINSC
Trigger: ACAGGAATTTATGGAGGTCAAAAACGCTCTAGTGGC...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000553118.5
CDS-3UTR CAA 90 bp TTGATCTATGGAATTGACATCTTCGCATGGATGCTCCACGCAGCACGCTTGCTTAGCTCGTCACTCAAGTaGTTATTCACCTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: LIYGIDIFAWMLHAARLLSSSLK*LFTFIS
Trigger: GCTAATGAAGGTGAATAACAACTTGAGTGACGAGCT...AAGCAAGCGTGCTGCGTGGAGCATCCATGCGAAGATGTCAATTCCATAGATCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp AAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTTGGTTCTGAGCTCCTGTATGTTTTaGGTGATCTGTTCAGTCTTC +
Preference number: 5 (lower is better)
Translates to: KLMGAIEDKNRRVLLLVLSSCMF*VICSVF
Trigger: GAAGACTGAACAGATCACCAAAAACATACAGGAGCT...CAGAACCAAGAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CTGATGCTTCTCTTTGCTGCAGGTTTTGAACAAACTGTCTGGCTTACAGGGGTGAGCTCCTGTATGTTTTaGGTGATCTGTTCAGTCTTC +
Preference number: 5 (lower is better)
Translates to: LMLLFAAGFEQTVWLTGVSSCMF*VICSVF
Trigger: GAAGACTGAACAGATCACCAAAAACATACAGGAGCT...CACCCCTGTAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGAGAAGCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCTCAGACTTGGGTTTTTaGGGGAATAATGCTGCCATT +
Preference number: 5 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFSDLGF*GNNAAI
Trigger: AATGGCAGCATTATTCCCCAAAAAACCCAAGTCTGA...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTCCCTGCCCTTGTCAGTaGTTGTTCTCTTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLPCPCQ*LFSLVV
Trigger: CACCACCAAAGAGAACAACAACTGACAAGGGCAGGG...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAGGCGGTGCCCTGCCCTaGTCAGTTGTTGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQGGALP*SVVVLF
Trigger: AAAGAGAACAACAACTGACAAGGGCAGGGCACCGCC...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGGCGGTGCCCTGCCCTaGTCAGTTGTTGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQGGALP*SVVVLF
Trigger: AAAGAGAACAACAACTGACAAGGGCAGGGCACCGCC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp ACTTGTTTGGAGTTTTGGCACCGTGGGCTAACCGAGCACTCTTCTGACATATTCTCAACTCAACAGTTGTaGACAACACAACCGAACATC +
Preference number: 5 (lower is better)
Translates to: TCLEFWHRGLTEHSSDIFSTQQL*TTQPNI
Trigger: GATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGA...GAATATGTCAGAAGAGTGCTCGGTTAGCCCACGGTGCCAAAACTCCAAACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTACAGGAAATTCACTTATaGCACGATGCTTGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: MLLTVKQNATKASTHGDLQEIHL*HDAWQG
Trigger: TCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCTG...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTACAACTGGAAATGCTTaGTTGGTCCCCATGTTCCTT +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALTTGNA*LVPMFL
Trigger: AAGGAACATGGGGACCAACAAAGCATTTCCAGTTGT...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAAACAACTGGAAATGCTTaGTTGGTCCCCATGTTCCTT +
Preference number: 5 (lower is better)
Translates to: QNGCSKQEREELSHSEQETTGNA*LVPMFL
Trigger: AAGGAACATGGGGACCAACAAAGCATTTCCAGTTGT...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTAAAAACAGGCGAGTTTaGCTCTTGGTTCTGCAACTG +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALKNRRV*LLVLQL
Trigger: CAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTTTT...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTAGCTCATGGGTGCCATaGAGGACAAAAACAGGCGAG +
Preference number: 5 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLSSWVP*RTKTGE
Trigger: CTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCT...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ATTTTAAACACCATTCACCACGTCCATTCTGCGCAGGGTCCTTCCCTTCTGGTGAAATCAGATCGCCTATaGCTTTCCAAAAAGCCAACA +
Preference number: 5 (lower is better)
Translates to: ILNTIHHVHSAQGPSLLVKSDRL*LSKKPT
Trigger: TGTTGGCTTTTTGGAAAGCAATAGGCGATCTGATTT...CACCAGAAGGGAAGGACCCTGCGCAGAATGGACGTGGTGAATGGTGTTTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS TCA 90 bp TGCATCAGGCTGGTCATCTTGTTGGATGGTATGACCTACCTTGGCTaGTTAGGTACAATGTTAATTGAGACTAAAAACACCAGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: CIRLVILLDGMTYLG*LGTMLIETKNTSGS
Trigger: GCTCCCACTGGTGTTTTTAGTCTCAATTAACATTGTACCTAATCAGCCAAGGTAGGTCATACCATCCAACAAGATGACCAGCCTGATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547267.2
CDS GCA 90 bp GCTTTACGTCTTCCACTCATAATAGACGCAGGGTCCAGCAAAGAATaGTCCCATATAGAGTTAGCACCGTTATTATACAAGGTCTCAACC +
Preference number: 5 (lower is better)
Translates to: ALRLPLIIDAGSSKE*SHIELAPLLYKVST
Trigger: GGTTGAGACCTTGTATAATAACGGTGCTAACTCTATATGGGAGCATTCTTTGCTGGACCCTGCGTCTATTATGAGTGGAAGACGTAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547267.2
ENST00000547815.5
ENST00000548643.5
ENST00000550186.5
ENST00000551209.5
ENST00000551455.5
ENST00000553118.5
CDS-3UTR CAA 90 bp AAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAAGCAACTGTTTGCTTGCTAAGATCTTaGGCAGTCACACTATCGTCA +
Preference number: 5 (lower is better)
Translates to: KSDQIPHQCQGLSPQATVCLLRS*AVTLSS
Trigger: TGACGATAGTGTGACTGCCAAAGATCTTAGCAAGCA...AACAGTTGCTTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp AGAGTGGTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTCTCGAATGGAGTTGCTaGCTAAGATCTTTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: RVVGSVCVLRTSLHLIYILEWSC*LRSLAV
Trigger: GACTGCCAAAGATCTTAGCAAGCAACTCCATTCGAG...AATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAACCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAAAAATCTGCCCTGCTTaGGAGGCAACATGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKKICPA*EATWSG
Trigger: CCCACTCCATGTTGCCTCCAAAGCAGGGCAGATTTT...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
44% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGGTGCCCTCCTTGCCTaGCATAATCAACGGGAGTTT +
Preference number: 5 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQGALLA*HNQREF
Trigger: AAACTCCCGTTGATTATGCAAGGCAAGGAGGGCACC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp ACCACTTTAAAATTTGTCATGGTGGGGCTGGGAAATGTTTGCAGGCAAGCTGTAGCTGCTGTCTGCCATTaGAGGTATTATAAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: TTLKFVMVGLGNVCRQAVAAVCH*RYYKVL
Trigger: CAGCACTTTATAATACCTCAAATGGCAGACAGCAGC...TACAGCTTGCCTGCAAACATTTCCCAGCCCCACCATGACAAATTTTAAAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGATGAGTACTCAGGATaGACCGGAAGAAAGGGGACG +
Preference number: 5 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQDEYSG*TGRKGT
Trigger: CGTCCCCTTTCTTCCGGTCAATCCTGAGTACTCATC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp GGGTGTGGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACAGTATGAGCTCCACATaGTCTTTTGAACCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: GCGVSSAVYSLTEIVKSDSMSST*SFEPER
Trigger: TCTCTCGGGTTCAAAAGACAATGTGGAGCTCATACT...GTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACCACACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGGGCTGATCGTTGTCTaGACTCTCAACGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNGLIVV*TLNAVL
Trigger: CAGCACAGCGTTGAGAGTCAAGACAACGATCAGCCC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTATTCTGCCGGTTTGTTTaGCTTGCAGTGGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: MLLTVKQNATKASTHGDLFCRFV*LAVVSK
Trigger: TTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAA...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AGAGTGGTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTATTAGCTGCTGTATCTaGGCCTCAGAAGCCACTAGA +
Preference number: 5 (lower is better)
Translates to: RVVGSVCVLRTSLHLIYIISCCI*ASEATR
Trigger: TCTAGTGGCTTCTGAGGCCAAGATACAGCAGCTAAT...AATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAACCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGGTACTCAGAACCAGTTaGCACCTGATATACATTGGT +
Preference number: 5 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKVLRTS*HLIYIG
Trigger: ACCAATGTATATCAGGTGCAAACTGGTTCTGAGTAC...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTGAAATTGGACTTTATAAAGCCTAGAAAACAGAGGAGGCGGTGCCCTGCCCTTTCAGACTTGGGTTTTTaGGGGAATAATGCTGCCATT +
Preference number: 5 (lower is better)
Translates to: LKLDFIKPRKQRRRCPALSDLGF*GNNAAI
Trigger: AATGGCAGCATTATTCCCCAAAAAACCCAAGTCTGA...AAGGGCAGGGCACCGCCTCCTCTGTTTTCTAGGCTTTATAAAGTCCAATTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAATCAGACTTGGGTTTTTaGGGGAATAATGCTGCCATT +
Preference number: 5 (lower is better)
Translates to: QNGCSKQEREELSHSEQESDLGF*GNNAAI
Trigger: AATGGCAGCATTATTCCCCAAAAAACCCAAGTCTGA...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGCCCTGCCCTTGTCAGTaGTTGTTCTCTTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQPCPCQ*LFSLVV
Trigger: CACCACCAAAGAGAACAACAACTGACAAGGGCAGGG...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGTCAACTCAACAGTTGTaGACAACACAACCGAACATC +
Preference number: 5 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKSTQQL*TTQPNI
Trigger: GATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGA...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCTCTTTGCTGCAGGTTTaGAACAAACTGTCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLSLLQV*NKLSGL
Trigger: TAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGA...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGTCTTTGCTGCAGGTTTaGAACAAACTGTCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKSLLQV*NKLSGL
Trigger: TAAGCCAGACAGTTTGTTCAAAACCTGCAGCAAAGA...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACTCATGAGGTGATGGAGGAGAAACTAACTCAGATGACTGCGATACGATACATCAGGCAACATCTTCTATaGCAGGTCCTCAAACATTCC +
Preference number: 5 (lower is better)
Translates to: THEVMEEKLTQMTAIRYIRQHLL*QVLKHS
Trigger: GGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCT...GATGTATCGTATCGCAGTCATCTGAGTTAGTTTCTCCTCCATCACCTCATGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTTGGTCCCCATGTTCCTaGACTTTCTCTAGGGCCATA +
Preference number: 5 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLWSPCS*TFSRAI
Trigger: TATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCA...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACTCTGCCCTATCAGCTTaGGGGGAAGGGTGGCATATG +
Preference number: 5 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNSALSA*GEGWHM
Trigger: CATATGCCACCCTTCCCCCAAAGCTGATAGGGCAGA...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ACTATTGGAAAGCTCATGGGTGCCATTGAGGACAAAAACAGGCGAGTTTTGCTCCATGAAATGCTGTGTTaGATCTTTGGGCCCAATTCA +
Preference number: 5 (lower is better)
Translates to: TIGKLMGAIEDKNRRVLLHEMLC*IFGPNS
Trigger: TGAATTGGGCCCAAAGATCAAACACAGCATTTCATG...GAGCAAAACTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCTTTCCAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CAGAATGGCTGCAGTAAGCAGGAACGGGAAGAGCTTTCACATTCAGAACAAGAACATGAAATGCTGTGTTaGATCTTTGGGCCCAATTCA +
Preference number: 5 (lower is better)
Translates to: QNGCSKQEREELSHSEQEHEMLC*IFGPNS
Trigger: TGAATTGGGCCCAAAGATCAAACACAGCATTTCATG...TTCTTGTTCTGAATGTGAAAGCTCTTCCCGTTCCTGCTTACTGCAGCCATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACTGCAACTGAATCACTaGAGAAGCCGTGCACAGCTC +
Preference number: 5 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKLQLNH*RSRAQL
Trigger: GAGCTGTGCACGGCTTCTCAAGTGATTCAGTTGCAG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS TCA 90 bp CAGAACCAGTTTGCACCTGATATACATTGGTTGTGGCCTGTTTCCTaGGGTTCGAATTTTCACTCTGGAGTGTTTGAAGCTTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: QNQFAPDIHWLWPVS*GSNFHSGVFEAFSA
Trigger: TGCAGAAAAAGCTTCAAACACTCCAGAGTGAAAATTCGAACCTCAGGAAACAGGCCACAACCAATGTATATCAGGTGCAAACTGGTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000550186.5
CDS TCA 90 bp TGTTACAATAACTGTTTTTCTTTCCTCGGACCACATCACAGTGCCTaGGATTCTTCCTTGTACTATGGGATTAAAGCGTCAACCGTCCTG +
Preference number: 5 (lower is better)
Translates to: CYNNCFSFLGPHHSA*DSSLYYGIKASTVL
Trigger: CAGGACGGTTGACGCTTTAATCCCATAGTACAAGGAAGAATCTCAGGCACTGTGATGTGGTCCGAGGAAAGAAAAACAGTTATTGTAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551455.5
CDS-3UTR CAA 90 bp GGTGTGAGTTCAGCTGTCTACTCTTTGACAGAGATTGTAAAATCTGACCAAATTGCTCCACATTGTCTTTaGAACCCGAGAGAGAACTGC +
Preference number: 5 (lower is better)
Translates to: GVSSAVYSLTEIVKSDQIAPHCL*NPRENC
Trigger: GCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAGC...AATTTGGTCAGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGAACTCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAGCTCCACATTGTCTTTaGAACCCGAGAGAGAACTGC +
Preference number: 5 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKAPHCL*NPRENC
Trigger: GCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAGC...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp AGAGTGGTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTTTCTGCCGGTTTGTTTaGCTTGCAGTGGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: RVVGSVCVLRTSLHLIYIFCRFV*LAVVSK
Trigger: TTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAA...AATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAACCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp ATCTTCCATGGACATTCTATAAGCTGGGTGTGGTGTGAGTTCAGCTGTCTACTCGAATCGTGTTACTCTTaGGCATCTGGCATTTTAAAC +
Preference number: 5 (lower is better)
Translates to: IFHGHSISWVWCEFSCLLESCYS*ASGILN
Trigger: GTTTAAAATGCCAGATGCCAAAGAGTAACACGATTC...GAGTAGACAGCTGAACTCACACCACACCCAGCTTATAGAATGTCCATGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320063.10
ENST00000547815.5
CDS-3UTR CAA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAGGCTCTTCTGCCGGTTaGTTTTGCTTGCAGTGGTTT +
Preference number: 5 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKGSSAG*FCLQWF
Trigger: AAACCACTGCAAGCAAAACAAACCGGCAGAAGAGCC...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000553118.5
CDS-3UTR CAA 90 bp ATGCTACTCACAGTGAAGCAAAATGCGACAAAAGCATCCACACACGGTGACTTAAGCTCGTCACTCAAGTaGTTATTCACCTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: MLLTVKQNATKASTHGDLSSSLK*LFTFIS
Trigger: GCTAATGAAGGTGAATAACAACTTGAGTGACGAGCT...TAAGTCACCGTGTGTGGATGCTTTTGTCGCATTTTGCTTCACTGTGAGTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR CAA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACGGCTCGCTTCTCCCATaGGGAGATATGGTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNGSLLP*GDMVSD
Trigger: GTCAGAAACCATATCTCCCAATGGGAGAAGCGAGCC...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAACCCTGCCCTTGTCAGTaGTTGTTCTCTTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEPCPCQ*LFSLVV
Trigger: CACCACCAAAGAGAACAACAACTGACAAGGGCAGGG...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp CTGGAAATGCTTTGTTGGTCCCCATGTTCCTTGACTTTCTCTAGGGCCATAAAGGAGGCAACTTGTACTTaGATTCTTGTGTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LEMLCWSPCSLTFSRAIKEATCT*ILVSSS
Trigger: TGAAGAAGACACAAGAATCAAAGTACAAGTTGCCTC...CTTTATGGCCCTAGAGAAAGTCAAGGAACATGGGGACCAACAAAGCATTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTACTGGAAATGCTTTGTaGGTCCCCATGTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLTGNAL*VPMFLD
Trigger: GTCAAGGAACATGGGGACCAACAAAGCATTTCCAGT...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACAGATAAGGTGCGATTaGCCAACAGGAGCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKQIRCD*PTGAEN
Trigger: GTTCTCTGCTCCTGTTGGCAAATCGCACCTTATCTG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAACTGCAACTGAATCACTaGAGAAGCCGTGCACAGCTC +
Preference number: 5 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYELQLNH*RSRAQL
Trigger: GAGCTGTGCACGGCTTCTCAAGTGATTCAGTTGCAG...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAAGCTCATGGGTGCCATaGAGGACAAAAACAGGCGAG +
Preference number: 5 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYESSWVP*RTKTGE
Trigger: CTCGCCTGTTTTTGTCCTCAATGGCACCCATGAGCT...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTTTCACTCTGGAGTGTTaGAAGCTTCTGCCGGTTTGT +
Preference number: 5 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLFTLEC*KLLPVC
Trigger: ACAAACCGGCAGAAGCTTCAAACACTCCAGAGTGAA...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354574.8
ENST00000457474.6
CDS GCA 90 bp GTTTGTCAGAAAAAGGAGACATTTTTGTTTCAGTATGCTCATCAATaGATCAGGCTGGTCATCTTGTTGGATGGTATGACCTACCTTGGC +
Preference number: 5 (lower is better)
Translates to: VCQKKETFLFQYAHQ*IRLVILLDGMTYLG
Trigger: GCCAAGGTAGGTCATACCATCCAACAAGATGACCAGCCTGATGCATTGATGAGCATACTGAAACAAAAATGTCTCCTTTTTCTGACAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547267.2
CDS CCA 90 bp ATTTACAAGGTAATGTCACTCAAAACAGAAAGCAAATTGTTAAACTaGAGCCAGAACCTAGGCACTCAAACAATAGAAGCACTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: IYKVMSLKTESKLLN*SQNLGTQTIEALGR
Trigger: CCGGCCCAGTGCTTCTATTGTTTGAGTGCCTAGGTTCTGGCTCCAGTTTAACAATTTGCTTTCTGTTTTGAGTGACATTACCTTGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549999.1
CDS-3UTR CAA 90 bp AAAGGCAACATCTTCTATTGCAGGTCCTCAAACATTCCAAGGAAAACACTGCTTTGCTTGCTAAGATCTTaGGCAGTCACACTATCGTCA +
Preference number: 5 (lower is better)
Translates to: KGNIFYCRSSNIPRKTLLCLLRS*AVTLSS
Trigger: TGACGATAGTGTGACTGCCAAAGATCTTAGCAAGCA...AAGCAGTGTTTTCCTTGGAATGTTTGAGGACCTGCAATAGAAGATGTTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGCTCGAATGGAGTTGCTaGCTAAGATCTTTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQLEWSC*LRSLAV
Trigger: GACTGCCAAAGATCTTAGCAAGCAACTCCATTCGAG...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAACTCGAATGGAGTTGCTaGCTAAGATCTTTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQLEWSC*LRSLAV
Trigger: GACTGCCAAAGATCTTAGCAAGCAACTCCATTCGAG...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGCCGGTTTGTTTTGCTaGCAGTGGTTTCCAAATCTG +
Preference number: 5 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQAGLFC*QWFPNL
Trigger: CAGATTTGGAAACCACTGCAAGCAAAACAAACCGGC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAGGCTCTTCTGCCGGTTaGTTTTGCTTGCAGTGGTTT +
Preference number: 5 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYEGSSAG*FCLQWF
Trigger: AAACCACTGCAAGCAAAACAAACCGGCAGAAGAGCC...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000361006.9
CDS-3UTR CAA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATTAGCTGCTGTATCTaGGCCTCAGAAGCCACTAGA +
Preference number: 5 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQISCCI*ASEATR
Trigger: TCTAGTGGCTTCTGAGGCCAAGATACAGCAGCTAAT...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000553118.5
CDS-3UTR CAA 90 bp AGAGTGGTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTGTACTCAGAACCAGTTaGCACCTGATATACATTGGT +
Preference number: 5 (lower is better)
Translates to: RVVGSVCVLRTSLHLIYIVLRTS*HLIYIG
Trigger: ACCAATGTATATCAGGTGCAAACTGGTTCTGAGTAC...AATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAACCACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAACAGGAAATTCACTTATaGCACGATGCTTGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKQEIHL*HDAWQG
Trigger: TCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCTG...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAGAAGCTTCTGCCGGTTaGTTTTGCTTGCAGTGGTTT +
Preference number: 5 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQEASAG*FCLQWF
Trigger: AAACCACTGCAAGCAAAACAAACCGGCAGAAGCTTC...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354574.8
ENST00000457474.6
CDS CCA 90 bp AGACTGCATCCGTCTCTCGCCTGTCAACTTCATCGTACACATCCATaGCAAGTTCTTCAAACAAATGATTACTTAGAGATTGAAGTTTCT +
Preference number: 5 (lower is better)
Translates to: RLHPSLACQLHRTHP*QVLQTNDYLEIEVS
Trigger: AGAAACTTCAATCTCTAAGTAATCATTTGTTTGAAGAACTTGCCATGGATGTGTACGATGAAGTTGACAGGCGAGAGACGGATGCAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547815.5
ENST00000550186.5
ENST00000551209.5
ENST00000551455.5
ENST00000553118.5
CDS-3UTR CAA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGTGCTTGCTAAGATCTTaGGCAGTCACACTATCGTCA +
Preference number: 5 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQCLLRS*AVTLSS
Trigger: TGACGATAGTGTGACTGCCAAAGATCTTAGCAAGCA...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAATGCTTGCTAAGATCTTaGGCAGTCACACTATCGTCA +
Preference number: 5 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKCLLRS*AVTLSS
Trigger: TGACGATAGTGTGACTGCCAAAGATCTTAGCAAGCA...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGCTGCTGTCTGCCATTaGAGGTATTATAAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQAAVCH*RYYKVL
Trigger: CAGCACTTTATAATACCTCAAATGGCAGACAGCAGC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000553118.5
CDS-3UTR CAA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAGCTGCTGTCTGCCATTaGAGGTATTATAAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKAAVCH*RYYKVL
Trigger: CAGCACTTTATAATACCTCAAATGGCAGACAGCAGC...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000553118.5
CDS-3UTR CAA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAAGTATGAGCTCCACATaGTCTTTTGAACCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQSMSST*SFEPER
Trigger: TCTCTCGGGTTCAAAAGACAATGTGGAGCTCATACT...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGGAAATTCACTTATaGCACGATGCTTGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNQEIHL*HDAWQG
Trigger: TCCCTGCCAAGCATCGTGCAATAAGTGAATTTCCTG...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAAAAAACAGGCGAGTTTaGCTCTTGGTTCTGCAACTG +
Preference number: 5 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKKNRRV*LLVLQL
Trigger: CAGTTGCAGAACCAAGAGCAAAACTCGCCTGTTTTT...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
41% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACTTCTGCCGGTTTGTTTaGCTTGCAGTGGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: YVINSTVVDNTTEHQKLNFCRFV*LAVVSK
Trigger: TTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAA...GTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp AGAGTGGTTGGAAGTGTCTGTGTACTCAGAACCAGTTTGCACCTGATATACATTTCAGCTGTCTACTCTTaGACAGAGATTGTAAAATCT +
Preference number: 5 (lower is better)
Translates to: RVVGSVCVLRTSLHLIYISAVYS*TEIVKS
Trigger: AGATTTTACAATCTCTGTCAAAGAGTAGACAGCTGA...AATGTATATCAGGTGCAAACTGGTTCTGAGTACACAGACACTTCCAACCACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAGTACTCAGAACCAGTTaGCACCTGATATACATTGGT +
Preference number: 5 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQVLRTS*HLIYIG
Trigger: ACCAATGTATATCAGGTGCAAACTGGTTCTGAGTAC...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAATAGGCACAAAAAGCTCCTGTATGTTTTaGGTGATCTGTTCAGTCTTC +
Preference number: 5 (lower is better)
Translates to: VVDNTTEHQKLNQQIGTKSSCMF*VICSVF
Trigger: GAAGACTGAACAGATCACCAAAAACATACAGGAGCT...TTTTGTGCCTATTTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAATCAGACTTGGGTTTTTaGGGGAATAATGCTGCCATT +
Preference number: 5 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQSDLGF*GNNAAI
Trigger: AATGGCAGCATTATTCCCCAAAAAACCCAAGTCTGA...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGTCAACTCAACAGTTGTaGACAACACAACCGAACATC +
Preference number: 5 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQSTQQL*TTQPNI
Trigger: GATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGA...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000553118.5
CDS-3UTR CAA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAACATGAAATGCTGTGTTaGATCTTTGGGCCCAATTCA +
Preference number: 5 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQHEMLC*IFGPNS
Trigger: TGAATTGGGCCCAAAGATCAAACACAGCATTTCATG...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp GAGATTGTAAAATCTGACCAAATTCCCCACCAGTGCCAAGGTTTAAGTCCACAATGGAAAAGTTGTGGTTaGGACTTCCTCAAAACAAAA +
Preference number: 5 (lower is better)
Translates to: EIVKSDQIPHQCQGLSPQWKSCG*DFLKTK
Trigger: TTTTGTTTTGAGGAAGTCCAAACCACAACTTTTCCA...TTGTGGACTTAAACCTTGGCACTGGTGGGGAATTTGGTCAGATTTTACAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000547815.5
CDS-3UTR CAA 90 bp AAGTCCTTTCTCTACATACATGCTTGGAGATACCCCAAACTTAGAGATTATGAAAGCTCCTGTATGTTTTaGGTGATCTGTTCAGTCTTC +
Preference number: 5 (lower is better)
Translates to: KSFLYIHAWRYPKLRDYESSCMF*VICSVF
Trigger: GAAGACTGAACAGATCACCAAAAACATACAGGAGCT...TTCATAATCTCTAAGTTTGGGGTATCTCCAAGCATGTATGTAGAGAAAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp TTTTGGATGTATGTGATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGGAGGCAACTTGTACTTaGATTCTTGTGTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: FWMYVINSTVVDNTTEHQEATCT*ILVSSS
Trigger: TGAAGAAGACACAAGAATCAAAGTACAAGTTGCCTC...CTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGATCACATACATCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS-3UTR CAA 90 bp ATCAACTCAACAGTTGTTGACAACACAACCGAACATCAGAAACTAAACCAGCAAGCAAATAAGAACTATTaGCATTCCAAGGCAGATGAC +
Preference number: 5 (lower is better)
Translates to: INSTVVDNTTEHQKLNQQANKNY*HSKADD
Trigger: GTCATCTGCCTTGGAATGCAAATAGTTCTTATTTGC...TTGCTGGTTTAGTTTCTGATGTTCGGTTGTGTTGTCAACAACTGTTGAGTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
CDS TCA 90 bp TATCCCATAGGGAGCAGGGATTATTCTAGAGGATCTAATACACTTTaGACAAAAGATTTCACAAACTACCCAAGTCTCTCTGATTTCTTT +
Preference number: 5 (lower is better)
Translates to: YPIGSRDYSRGSNTL*TKDFTNYPSLSDFF
Trigger: AAAGAAATCAGAGAGACTTGGGTAGTTTGTGAAATCTTTTGTTCAAAGTGTATTAGATCCTCTAGAATAATCCCTGCTCCCTATGGGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549999.1
CDS CCA 90 bp AAACAAAGTACCATTTATATTGCTCACTATTCACTGACTTTAAAATaGAGTACAAAGACGTCTCCTGAGACACCTGAGCAGTTTATCACA +
Preference number: 5 (lower is better)
Translates to: KQSTIYIAHYSLTLK*STKTSPETPEQFIT
Trigger: TGTGATAAACTGCTCAGGTGTCTCAGGAGACGTCTTTGTACTCCATTTTAAAGTCAGTGAATAGTGAGCAATATAAATGGTACTTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS GCA 72 bp GGAGCGGGCCCGGCCGGTGCGACTCACCCGGCCCGCTaGAGTCAGCGCACACCTCGCTGCTCCGGAGCCGTT +
Preference number: 6 (lower is better)
Translates to: GAGPAGATHPAR*SQRTPRCSGAV
Trigger: AACGGCTCCGGAGCAGCGAGGTGTGCGCTGACTGCAGCGGGCCGGGTGAGTCGCACCGGCCGGGCCCGCTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548643.5
CDS GCA 72 bp CGGGCCAGGAAAGCAGAGGGGAGCGGGCCCGGCCGGTaGGACTCACCCGGCCCGCTGCAGTCAGCGCACACC +
Preference number: 6 (lower is better)
Translates to: RARKAEGSGPGR*DSPGPLQSAHT
Trigger: GGTGTGCGCTGACTGCAGCGGGCCGGGTGAGTCGCACCGGCCGGGCCCGCTCCCCTCTGCTTTCCTGGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548643.5
CDS CAA 72 bp GGCGGCGCTGACGGCGGCGCCTCTCCCCTCAGCGCCTaGCAGCCTTGGCACAGCACGCACGCGCGGGGAGGT +
Preference number: 6 (lower is better)
Translates to: GGADGGASPLSA*QPWHSTHARGG
Trigger: ACCTCCCCGCGCGTGCGTGCTGTGCCAAGGCTGCAAGGCGCTGAGGGGAGAGGCGCCGCCGTCAGCGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354574.8
ENST00000553118.5
CDS GCA 72 bp ACTCACCCGGCCCGCTGCAGTCAGCGCACACCTCGCTaGTCCGGAGCCGTTTCGACATGGCTCCCACCTCCC +
Preference number: 6 (lower is better)
Translates to: THPARCSQRTPR*SGAVSTWLPPP
Trigger: GGGAGGTGGGAGCCATGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTGACTGCAGCGGGCCGGGTGAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548643.5
CDS GCA 72 bp AAGGATCCGGCCCGCTGCAGTCAGCGCACACCTCGCTaGTCCGGAGCCGTTTCGACATGGCTCCCACCTCCC +
Preference number: 6 (lower is better)
Translates to: KDPARCSQRTPR*SGAVSTWLPPP
Trigger: GGGAGGTGGGAGCCATGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTGACTGCAGCGGGCCGGATCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547815.5
ENST00000551455.5
ENST00000553118.5
CDS CCA 72 bp CAGCGCACACCTCGCTGCTCCGGAGCCGTTTCGACATaGCTCCCACCTCCCACCTGCGGGGAACTAGAGGCC +
Preference number: 6 (lower is better)
Translates to: QRTPRCSGAVST*LPPPTCGELEA
Trigger: GGCCTCTAGTTCCCCGCAGGTGGGAGGTGGGAGCCATGTCGAAACGGCTCCGGAGCAGCGAGGTGTGCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547815.5
ENST00000548643.5
ENST00000551455.5
ENST00000553118.5
CDS CCA 72 bp TGCTTCTCCAGCCTGGATGCGTGCGCGGGGAAGGGCTaGAGTCTCATCCTGCTCTCTTCGGGGCGGCTCGCT +
Preference number: 6 (lower is better)
Translates to: CFSSLDACAGKG*SLILLSSGRLA
Trigger: AGCGAGCCGCCCCGAAGAGAGCAGGATGAGACTCCAGCCCTTCCCCGCGCACGCATCCAGGCTGGAGAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
CDS TCA 72 bp TCGTACGCACACTGGATGACCTGCTGCGTGACCAGCTaGACGTCTGTGGGTGAGCCGGGGTCCCCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: SYAHWMTCCVTS*TSVGEPGSPGR
Trigger: CCTCCCAGGGGACCCCGGCTCACCCACAGACGTTCAGCTGGTCACGCAGCAGGTCATCCAGTGTGCGTACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000551209.5
ENST00000553118.5
CDS GCA 72 bp TGGATGCGTGCGCGGGGAAGGGCTGGAGTCTCATCCTaGTCTCTTCGGGGCGGCTCGCTTCTCCCATTGGGA +
Preference number: 6 (lower is better)
Translates to: WMRARGRAGVSS*SLRGGSLLPLG
Trigger: TCCCAATGGGAGAAGCGAGCCGCCCCGAAGAGAGCAGGATGAGACTCCAGCCCTTCCCCGCGCACGCATCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
CDS CCA 72 bp ACAAGTGCACTCCTCCCGATGTGCGCGGGGAAGGGCTaGAGTCTCATCCTGCTCTCTTCGGGGCGGCTCGCT +
Preference number: 6 (lower is better)
Translates to: TSALLPMCAGKG*SLILLSSGRLA
Trigger: AGCGAGCCGCCCCGAAGAGAGCAGGATGAGACTCCAGCCCTTCCCCGCGCACATCGGGAGGAGTGCACTTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000551209.5
CDS TCA 72 bp CACTGCACAGCAGCTTTGGCAGGGCTAGCCCTCAGCTaGTGCGTGCTTGCCCTTCCATGGGACGCATGGCCT +
Preference number: 6 (lower is better)
Translates to: HCTAALAGLALS*CVLALPWDAWP
Trigger: AGGCCATGCGTCCCATGGAAGGGCAAGCACGCATCAGCTGAGGGCTAGCCCTGCCAAAGCTGCTGTGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS GCA 72 bp GGTACCAAGCCATCCCCTGGCCACACCATACTTCTTTaGCGTCCCTTTCGGCTTGACCTGGAGCGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: GTKPSPGHTILL*RPFRLDLERGG
Trigger: CCCTCCCCGCTCCAGGTCAAGCCGAAAGGGACGGCAAAGAAGTATGGTGTGGCCAGGGGATGGCTTGGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546613.5
CDS GCA 72 bp AGCTTTGGCAGGGCTAGCCCTCAGCTGATGCGTGCTTaGCCTTCCATGGGACGCATGGCCTCTCACCTTCTG +
Preference number: 6 (lower is better)
Translates to: SFGRASPQLMRA*PSMGRMASHLL
Trigger: CAGAAGGTGAGAGGCCATGCGTCCCATGGAAGGGCAAGCACGCATCAGCTGAGGGCTAGCCCTGCCAAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS CAA 72 bp GACGACCGTTGTCTCGGTTACCAGGGCGCTGTGGTTTaGCGTGGCAAGCCAGACTGCATCCGTCTCTCGCCT +
Preference number: 6 (lower is better)
Translates to: DDRCLGYQGAVV*RGKPDCIRLSP
Trigger: AGGCGAGAGACGGATGCAGTCTGGCTTGCCACGCAAAACCACAGCGCCCTGGTAACCGAGACAACGGTCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547815.5
ENST00000550186.5
ENST00000551209.5
ENST00000551455.5
ENST00000553118.5
CDS GCA 72 bp GGTACCAAGCCATCCCCTGGCCACACCATACTTCTTTaGCGTCCCTTTCGGCTTGACCCCATGCCATCTGGC +
Preference number: 6 (lower is better)
Translates to: GTKPSPGHTILL*RPFRLDPMPSG
Trigger: GCCAGATGGCATGGGGTCAAGCCGAAAGGGACGGCAAAGAAGTATGGTGTGGCCAGGGGATGGCTTGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000548000.5
ENST00000548655.5
ENST00000549999.1
ENST00000550186.5
ENST00000551209.5
ENST00000553118.5
CDS CCA 72 bp AAGGGGACGACCGTTGTCTCGGTTACCAGGGCGCTGTaGTTTTGCGTGGCAAGCCAGACTGCATCCGTCTCT +
Preference number: 6 (lower is better)
Translates to: KGTTVVSVTRAL*FCVASQTASVS
Trigger: AGAGACGGATGCAGTCTGGCTTGCCACGCAAAACCACAGCGCCCTGGTAACCGAGACAACGGTCGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547815.5
ENST00000550186.5
ENST00000551209.5
ENST00000551455.5
ENST00000553118.5
CDS CCA 72 bp GGAGATATGGTTTCTGACCTGATCCGGTCTCGTACATaGACATGGGCCTACTGCCCCGGGCAGACGGACGTC +
Preference number: 6 (lower is better)
Translates to: GDMVSDLIRSRT*TWAYCPGQTDV
Trigger: GACGTCCGTCTGCCCGGGGCAGTAGGCCCATGTCCATGTACGAGACCGGATCAGGTCAGAAACCATATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
ENST00000551209.5
CDS CAA 72 bp GGATGTGGGATAGGGCTGCCAGGGTGGGAGCAGGGTTaGAATGCTGATAAACATGCCCCTGCCCAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: GCGIGLPGWEQG*NADKHAPAQGS
Trigger: AGAGCCCTGGGCAGGGGCATGTTTATCAGCATTCAAACCCTGCTCCCACCCTGGCAGCCCTATCCCACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551455.5
CDS CAA 90 bp ATAAGGTGGGGATGTGGGATAGGGCTGCCAGGGTGGGAGCAGGGTTaGAATGCTGATAAACATGCCCCTGCCCAGGGCTCTCATTGGCTC +
Preference number: 6 (lower is better)
Translates to: IRWGCGIGLPGWEQG*NADKHAPAQGSHWL
Trigger: GAGCCAATGAGAGCCCTGGGCAGGGGCATGTTTATCAGCATTCAAACCCTGCTCCCACCCTGGCAGCCCTATCCCACATCCCCACCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551455.5
CDS GCA 72 bp TGTCGTTGGGAGTGTTGTCGTAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCCTGGATGCGTGCGCGG +
Preference number: 6 (lower is better)
Translates to: CRWECCRSHSQV*CSASPAWMRAR
Trigger: CCGCGCACGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACTACGACAACACTCCCAACGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354574.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
CDS CAA 90 bp GCTGGAGTCTCATCCTGCTCTCTTCGGGGCGGCTCGCTTCTCCCATaGGGAGATATGGTTTCTGACCTGATCCGGTCTCGTACATGGACA +
Preference number: 6 (lower is better)
Translates to: AGVSSCSLRGGSLLP*GDMVSDLIRSRTWT
Trigger: TGTCCATGTACGAGACCGGATCAGGTCAGAAACCATATCTCCCAATGGGAGAAGCGAGCCGCCCCGAAGAGAGCAGGATGAGACTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
ENST00000551209.5
CDS TCA 72 bp GGGCGGCTCGCTTCTCCCATTGGGAGATATGGTTTCTaGCCTGATCCGGTCTCGTACATGGACATGGGCCTA +
Preference number: 6 (lower is better)
Translates to: GRLASPIGRYGF*PDPVSYMDMGL
Trigger: TAGGCCCATGTCCATGTACGAGACCGGATCAGGTCAGAAACCATATCTCCCAATGGGAGAAGCGAGCCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
ENST00000551209.5
CDS GCA 72 bp TGTCGTTGGGAGTGTTGTCGTAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCCTGGATGCCCTTCGGG +
Preference number: 6 (lower is better)
Translates to: CRWECCRSHSQV*CSASPAWMPFG
Trigger: CCCGAAGGGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACTACGACAACACTCCCAACGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355312.8
ENST00000551209.5
CDS GCA 72 bp TCCCAGACCCACTCTGTTCTTTCCAGTCAGGTCTCCTaGTGTGCTGAACACACTTTGTCCCTCCCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: SQTHSVLSSQVS*CAEHTLSLPAS
Trigger: GGAGGCAGGGAGGGACAAAGTGTGTTCAGCACAGCAGGAGACCTGACTGGAAAGAACAGAGTGGGTCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS CCA 72 bp GTTGGAGGCCACGGTGTGTGTTTCAGATGCCTCACTTaGGAGATATGGCGCCCTAGACTCCGATGGACACTG +
Preference number: 6 (lower is better)
Translates to: VGGHGVCFRCLT*EIWRPRLRWTL
Trigger: CAGTGTCCATCGGAGTCTAGGGCGCCATATCTCCCAAGTGAGGCATCTGAAACACACACCGTGGCCTCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547267.2
ENST00000547815.5
ENST00000548643.5
ENST00000551209.5
ENST00000551455.5
ENST00000553118.5
CDS CCA 72 bp ATGGGGTTCTGCTGTGTCTGGTACCAAGCCATCCCCTaGCCACACCATACTTCTTTGCCGTCCCTTTCGGCT +
Preference number: 6 (lower is better)
Translates to: MGFCCVWYQAIP*PHHTSLPSLSA
Trigger: AGCCGAAAGGGACGGCAAAGAAGTATGGTGTGGCCAGGGGATGGCTTGGTACCAGACACAGCAGAACCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000546613.5
ENST00000548000.5
ENST00000548655.5
ENST00000549999.1
ENST00000550186.5
ENST00000551209.5
ENST00000552978.5
ENST00000553118.5
CDS CCA 72 bp GGTTTCAGCATGCTGGCCAGGCTGATCTCGAACTTCTaGCCTCAAGTAACCCACCCGCCTTGGACCCTCAAA +
Preference number: 6 (lower is better)
Translates to: GFSMLARLISNF*PQVTHPPWTLK
Trigger: TTTGAGGGTCCAAGGCGGGTGGGTTACTTGAGGCCAGAAGTTCGAGATCAGCCTGGCCAGCATGCTGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS CAA 72 bp TCATCCTGCTCTCTTCGGGGCGGCTCGCTTCTCCCATaGGGAGATATGGTTTCTGACCTGATCCGGTCTCGT +
Preference number: 6 (lower is better)
Translates to: SSCSLRGGSLLP*GDMVSDLIRSR
Trigger: ACGAGACCGGATCAGGTCAGAAACCATATCTCCCAATGGGAGAAGCGAGCCGCCCCGAAGAGAGCAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
ENST00000551209.5
CDS CAA 72 bp CGTCCCTTTCGGCTTGACCTGGAGCGGGGAGGGTGTTaGTTTATAAAGCCATCCTCAGGTGGGCCAACTCCT +
Preference number: 6 (lower is better)
Translates to: RPFRLDLERGGC*FIKPSSGGPTP
Trigger: AGGAGTTGGCCCACCTGAGGATGGCTTTATAAACAAACACCCTCCCCGCTCCAGGTCAAGCCGAAAGGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546613.5
CDS TCA 72 bp GCTCGCTTCTCCCATTGGGAGATATGGTTTCTGACCTaGTCCGGTCTCGTACATGGACATGGGCCTACTGCC +
Preference number: 6 (lower is better)
Translates to: ARFSHWEIWFLT*SGLVHGHGPTA
Trigger: GGCAGTAGGCCCATGTCCATGTACGAGACCGGATCAGGTCAGAAACCATATCTCCCAATGGGAGAAGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000549999.1
ENST00000550186.5
ENST00000551209.5
CDS CAA 90 bp GCCCTTCCATGGGACGCATGGCCTCTCACCTTCTGCCGGTTTGTTTaGCTTGCAGTGGTTTCCAAATCTGTGTCTTCGTCTGATGCCACG +
Preference number: 6 (lower is better)
Translates to: ALPWDAWPLTFCRFV*LAVVSKSVSSSDAT
Trigger: CGTGGCATCAGACGAAGACACAGATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAAGGTGAGAGGCCATGCGTCCCATGGAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS TCA 72 bp TCTCTGCTCACTCCCTCAGCCTGTGTGTGCTTCGTATaGCACACATCACTTTGTGCCTTCTCCGCAGTTCTC +
Preference number: 6 (lower is better)
Translates to: SLLTPSACVCFV*HTSLCAFSAVL
Trigger: GAGAACTGCGGAGAAGGCACAAAGTGATGTGTGTCATACGAAGCACACACAGGCTGAGGGAGTGAGCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS GCA 72 bp GGGACGCATGGCCTCTCACCTTCTGCCGGTTTGTTTTaGTTGCAGTGGTTTCCAAATCTGTGTCTTCGTCTG +
Preference number: 6 (lower is better)
Translates to: GTHGLSPSAGLF*LQWFPNLCLRL
Trigger: CAGACGAAGACACAGATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAAGGTGAGAGGCCATGCGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS GCA 72 bp CTTGCCCTTCCATGGGACGCATGGCCTCTCACCTTCTaGCGGTTTGTTTTGCTTGCAGTGGTTTCCAAATCT +
Preference number: 6 (lower is better)
Translates to: LALPWDAWPLTF*RFVLLAVVSKS
Trigger: AGATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAAGGTGAGAGGCCATGCGTCCCATGGAAGGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS GCA 72 bp TGTCGTTGGGAGTGTTGTCGTAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCCTGGATGCACGTTAGT +
Preference number: 6 (lower is better)
Translates to: CRWECCRSHSQV*CSASPAWMHVS
Trigger: ACTAACGTGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACTACGACAACACTCCCAACGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548000.5
CDS GCA 72 bp TGTCGTTGGGAGTGTTGTCGTAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCCTGGATGCCTACAAGA +
Preference number: 6 (lower is better)
Translates to: CRWECCRSHSQV*CSASPAWMPTR
Trigger: TCTTGTAGGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACTACGACAACACTCCCAACGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550480.1
CDS CCA 72 bp GGGTCTTCTTGCACTCTGACTGCAGTCGGTAGGCACTaGACGTCAGTAAACGAAGGGAAGTCCTCACCATAT +
Preference number: 6 (lower is better)
Translates to: GSSCTLTAVGRH*TSVNEGKSSPY
Trigger: ATATGGTGAGGACTTCCCTTCGTTTACTGACGTCCAGTGCCTACCGACTGCAGTCAGAGTGCAAGAAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000546613.5
ENST00000550186.5
ENST00000551209.5
ENST00000552978.5
ENST00000553118.5
CDS CCA 72 bp GCCCAGGAAGGATCTGGAAAGAGAGTGAAATCTCAGTaGCAGGGATACCAGCAGGTTGCTATACCGCCAGAT +
Preference number: 6 (lower is better)
Translates to: AQEGSGKRVKSQ*QGYQQVAIPPD
Trigger: ATCTGGCGGTATAGCAACCTGCTGGTATCCCTGCCACTGAGATTTCACTCTCTTTCCAGATCCTTCCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547267.2
CDS CCA 72 bp AGTCACTCTCAGGTGTGCTGTTCTGCTTCTCCAGCCTaGATGCCTACAAGAAAGAAGAGGGACCCTCATGAG +
Preference number: 6 (lower is better)
Translates to: SHSQVCCSASPA*MPTRKKRDPHE
Trigger: CTCATGAGGGTCCCTCTTCTTTCTTGTAGGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550480.1
CDS CAA 72 bp GAAAAGGGAGGGAAATACCTGGAGCGGGGAGGGTGTTaGTTTATAAAGCCATCCTCAGGTGGGCCAACTCCT +
Preference number: 6 (lower is better)
Translates to: EKGGKYLERGGC*FIKPSSGGPTP
Trigger: AGGAGTTGGCCCACCTGAGGATGGCTTTATAAACAAACACCCTCCCCGCTCCAGGTATTTCCCTCCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552978.5
CDS CAA 72 bp TGCTTATCAGCTGCCCCTCTGCTTCTAGGAGCCACTTaGTATGCACTGGCTAAATGCATGAGCAGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: CLSAAPLLLGAT*YALAKCMSRLV
Trigger: GACCAGCCTGCTCATGCATTTAGCCAGTGCATACAAAGTGGCTCCTAGAAGCAGAGGGGCAGCTGATAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552978.5
CDS CAA 90 bp TTCCATGGGACGCATGGCCTCTCACCTTCTGCCGGTTTGTTTTGCTaGCAGTGGTTTCCAAATCTGTGTCTTCGTCTGATGCCACGCTGT +
Preference number: 6 (lower is better)
Translates to: FHGTHGLSPSAGLFC*QWFPNLCLRLMPRC
Trigger: ACAGCGTGGCATCAGACGAAGACACAGATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAAGGTGAGAGGCCATGCGTCCCATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS CAA 90 bp TACAGCAGGTGCTTATCAGCTGCCCCTCTGCTTCTAGGAGCCACTTaGTATGCACTGGCTAAATGCATGAGCAGGCTGGTCTCGTCATTT +
Preference number: 6 (lower is better)
Translates to: YSRCLSAAPLLLGAT*YALAKCMSRLVSSF
Trigger: AAATGACGAGACCAGCCTGCTCATGCATTTAGCCAGTGCATACAAAGTGGCTCCTAGAAGCAGAGGGGCAGCTGATAAGCACCTGCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552978.5
CDS GCA 72 bp TGTCGTTGGGAGTGTTGTCGTAGTCACTCTCAGGTGTaGTGTTCTGCTTCTCCAGCCTGGATGCCTTCATTA +
Preference number: 6 (lower is better)
Translates to: CRWECCRSHSQV*CSASPAWMPSL
Trigger: TAATGAAGGCATCCAGGCTGGAGAAGCAGAACAGCACACCTGAGAGTGACTACGACAACACTCCCAACGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553118.5
CDS GCA 72 bp TACTGTATTTCCACGAGGCGCTCTGCCAGCTCATGGTaGCCTCCTTGCCTACCAAGAGAAAACAAAGTACCA +
Preference number: 6 (lower is better)
Translates to: YCISTRRSASSW*PPCLPRENKVP
Trigger: TGGTACTTTGTTTTCTCTTGGTAGGCAAGGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGAAATACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS CAA 72 bp TGGGACGCATGGCCTCTCACCTTCTGCCGGTTTGTTTaGCTTGCAGTGGTTTCCAAATCTGTGTCTTCGTCT +
Preference number: 6 (lower is better)
Translates to: WDAWPLTFCRFV*LAVVSKSVSSS
Trigger: AGACGAAGACACAGATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAAGGTGAGAGGCCATGCGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS CAA 72 bp TTCTCCAGCCTGGATGCCTTCATTAGCTGCTGTATCTaGGCCTCAGAAGCCACTAGAGCGTTTTTGACCTCC +
Preference number: 6 (lower is better)
Translates to: FSSLDAFISCCI*ASEATRAFLTS
Trigger: GGAGGTCAAAAACGCTCTAGTGGCTTCTGAGGCCAAGATACAGCAGCTAATGAAGGCATCCAGGCTGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553118.5
CDS GCA 72 bp TCCACGAGGCGCTCTGCCAGCTCATGGTGCCCTCCTTaGCTACCAAGAGAAAACAAAGTACCATTTATATTG +
Preference number: 6 (lower is better)
Translates to: STRRSASSWCPP*LPRENKVPFIL
Trigger: CAATATAAATGGTACTTTGTTTTCTCTTGGTAGGCAAGGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS CAA 72 bp ACGCATGGCCTCTCACCTTCTGCCGGTTTGTTTTGCTaGCAGTGGTTTCCAAATCTGTGTCTTCGTCTGATG +
Preference number: 6 (lower is better)
Translates to: THGLSPSAGLFC*QWFPNLCLRLM
Trigger: CATCAGACGAAGACACAGATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAAGGTGAGAGGCCATGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS CAA 72 bp TTCCATGGGACGCATGGCCTCTCACCTTCTGCCGGTTaGTTTTGCTTGCAGTGGTTTCCAAATCTGTGTCTT +
Preference number: 6 (lower is better)
Translates to: FHGTHGLSPSAG*FCLQWFPNLCL
Trigger: AAGACACAGATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAAGGTGAGAGGCCATGCGTCCCATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547694.2
CDS TCA 72 bp AAGAGTCTAGTAACCACTTCAAAGGCTTCAAATCAGTaGGAGACACGCCAACCTAACGCACAGCTCACGCCT +
Preference number: 6 (lower is better)
Translates to: KSLVTTSKASNQ*ETRQPNAQLTP
Trigger: AGGCGTGAGCTGTGCGTTAGGTTGGCGTGTCTCTCACTGATTTGAAGCCTTTGAAGTGGTTACTAGACTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS GCA 72 bp GAGAGTGAAATCTCAGTGGCAGGGATACCAGCAGGTTaGTATACCGCCAGATGGCAAAAGATGACTGAAGTT +
Preference number: 6 (lower is better)
Translates to: ESEISVAGIPAG*YTARWQKMTEV
Trigger: AACTTCAGTCATCTTTTGCCATCTGGCGGTATAGCAACCTGCTGGTATCCCTGCCACTGAGATTTCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547267.2
CDS GCA 72 bp CTGCTTCTAGGAGCCACTTTGTATGCACTGGCTAAATaGATGAGCAGGCTGGTCTCGTCATTTCCTTTATCC +
Preference number: 6 (lower is better)
Translates to: LLLGATLYALAK*MSRLVSSFPLS
Trigger: GGATAAAGGAAATGACGAGACCAGCCTGCTCATGCATTTAGCCAGTGCATACAAAGTGGCTCCTAGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552978.5
CDS CCA 72 bp CCAGTGGGAGCCTTGGGTAAACAGTTATCTTCTTTCTaGTTCAGGGCCACAGTTTGTAGCCCTAATGTGGAT +
Preference number: 6 (lower is better)
Translates to: PVGALGKQLSSF*FRATVCSPNVD
Trigger: ATCCACATTAGGGCTACAAACTGTGGCCCTGAACCAGAAAGAAGATAACTGTTTACCCAAGGCTCCCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547267.2
CDS CCA 72 bp CATGCCAGCACTTATATGACCACAGACCTTCAGCACTaGAAGCCACCTTCAGATTATCTCATTGAGCCCCAT +
Preference number: 6 (lower is better)
Translates to: HASTYMTTDLQH*KPPSDYLIEPH
Trigger: ATGGGGCTCAATGAGATAATCTGAAGGTGGCTTCCAGTGCTGAAGGTCTGTGGTCATATAAGTGCTGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548655.5
CDS CAA 72 bp TTCCACGAGGCGCTCTGCCAGCTCATGGTGCCCTCCTaGCCTACCAAGAGAAAACAAAGTACCATTTATATT +
Preference number: 6 (lower is better)
Translates to: FHEALCQLMVPS*PTKRKQSTIYI
Trigger: AATATAAATGGTACTTTGTTTTCTCTTGGTAGGCAAGGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS TCA 72 bp AGCCTGGATGCCTACAAGAAAGAAGAGGGACCCTCATaGGTTTGTAACATGAGACTCTTCTCAGGAGTCTTC +
Preference number: 6 (lower is better)
Translates to: SLDAYKKEEGPS*VCNMRLFSGVF
Trigger: GAAGACTCCTGAGAAGAGTCTCATGTTACAAACTCATGAGGGTCCCTCTTCTTTCTTGTAGGCATCCAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550480.1
CDS GCA 72 bp CACTCTGGAGTGTTTGAAGCTTCTGCCGGTTTGTTTTaGTTGCAGTGGTTTCCAAATCTGTGTCTTCGTCTG +
Preference number: 6 (lower is better)
Translates to: HSGVFEASAGLF*LQWFPNLCLRL
Trigger: CAGACGAAGACACAGATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAAGCTTCAAACACTCCAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000457474.6
ENST00000551209.5
CDS GCA 72 bp CCTGTGAACATTAAAGATGCAGTTAAATACAGCAGGTaGTTATCAGCTGCCCCTCTGCTTCTAGGAGCCACT +
Preference number: 6 (lower is better)
Translates to: PVNIKDAVKYSR*LSAAPLLLGAT
Trigger: AGTGGCTCCTAGAAGCAGAGGGGCAGCTGATAAGCACCTGCTGTATTTAACTGCATCTTTAATGTTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552978.5
CDS CAA 72 bp TGCTGTATCTTGGCCTCAGAAGCCACTAGAGCGTTTTaGACCTCCATAAATTCCTGTACAGTGACTGGTCCA +
Preference number: 6 (lower is better)
Translates to: CCILASEATRAF*TSINSCTVTGP
Trigger: TGGACCAGTCACTGTACAGGAATTTATGGAGGTCAAAAACGCTCTAGTGGCTTCTGAGGCCAAGATACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000547815.5
ENST00000549999.1
ENST00000550186.5
ENST00000551455.5
ENST00000553118.5
CDS CAA 90 bp ATACTGTATTTCCACGAGGCGCTCTGCCAGCTCATGGTGCCCTCCTaGCCTACCAAGAGAAAACAAAGTACCATTTATATTGCTCACTAT +
Preference number: 6 (lower is better)
Translates to: ILYFHEALCQLMVPS*PTKRKQSTIYIAHY
Trigger: ATAGTGAGCAATATAAATGGTACTTTGTTTTCTCTTGGTAGGCAAGGAGGGCACCATGAGCTGGCAGAGCGCCTCGTGGAAATACAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS TCA 72 bp TGGCCACACCATACTTCTTTGCCGTCCCTTTCGGCTTaGCCTGTGAACATTAAAGATGCAGTTAAATACAGC +
Preference number: 6 (lower is better)
Translates to: WPHHTSLPSLSA*PVNIKDAVKYS
Trigger: GCTGTATTTAACTGCATCTTTAATGTTCACAGGTCAAGCCGAAAGGGACGGCAAAGAAGTATGGTGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552978.5
CDS CAA 72 bp CTCAAGTTGTTATTCACCTTCATTAGCTGCTGTATCTaGGCCTCAGAAGCCACTAGAGCGTTTTTGACCTCC +
Preference number: 6 (lower is better)
Translates to: LKLLFTFISCCI*ASEATRAFLTS
Trigger: GGAGGTCAAAAACGCTCTAGTGGCTTCTGAGGCCAAGATACAGCAGCTAATGAAGGTGAATAACAACTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000547815.5
ENST00000549999.1
ENST00000550186.5
ENST00000551455.5
CDS CAA 72 bp TCTGGAGTGTTTGAAGCTTCTGCCGGTTTGTTTTGCTaGCAGTGGTTTCCAAATCTGTGTCTTCGTCTGATG +
Preference number: 6 (lower is better)
Translates to: SGVFEASAGLFC*QWFPNLCLRLM
Trigger: CATCAGACGAAGACACAGATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAAGCTTCAAACACTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354574.8
ENST00000457474.6
ENST00000551209.5
CDS CAA 90 bp AGCTCGTCACTCAAGTTGTTATTCACCTTCATTAGCTGCTGTATCTaGGCCTCAGAAGCCACTAGAGCGTTTTTGACCTCCATAAATTCC +
Preference number: 6 (lower is better)
Translates to: SSSLKLLFTFISCCI*ASEATRAFLTSINS
Trigger: GGAATTTATGGAGGTCAAAAACGCTCTAGTGGCTTCTGAGGCCAAGATACAGCAGCTAATGAAGGTGAATAACAACTTGAGTGACGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000547815.5
ENST00000549999.1
ENST00000550186.5
ENST00000551455.5
CDS TCA 72 bp ACAAGAAAGAAGAGGGACCCTCATGAGTTTGTAACATaGGACTCTTCTCAGGAGTCTTCCCCAGGAATTGTT +
Preference number: 6 (lower is better)
Translates to: TRKKRDPHEFVT*DSSQESSPGIV
Trigger: AACAATTCCTGGGGAAGACTCCTGAGAAGAGTCTCATGTTACAAACTCATGAGGGTCCCTCTTCTTTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550480.1
CDS CCA 72 bp GGAGTGGGGTGTTTCCTTTTTCAGGATGAAAGAAGTTaGCTTGTGCTCCTAAAGATAACAGTCTCAAACAGG +
Preference number: 6 (lower is better)
Translates to: GVGCFLFQDERS*LVLLKITVSNR
Trigger: CCTGTTTGAGACTGTTATCTTTAGGAGCACAAGCCAACTTCTTTCATCCTGAAAAAGGAAACACCCCACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547815.5
ENST00000548643.5
ENST00000550186.5
ENST00000551209.5
ENST00000551455.5
ENST00000553118.5
CDS CCA 72 bp TGCTCATCAATGCATCAGGCTGGTCATCTTGTTGGATaGTATGACCTACCTTGGCTGATTAGGTACAATGTT +
Preference number: 6 (lower is better)
Translates to: CSSMHQAGHLVG*YDLPWLIRYNV
Trigger: AACATTGTACCTAATCAGCCAAGGTAGGTCATACCATCCAACAAGATGACCAGCCTGATGCATTGATGAGCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547267.2
CDS CAA 72 bp CATCTTTTCCAAGCAACTTCTGCCGGTTTGTTTTGCTaGCAGTGGTTTCCAAATCTGTGTCTTCGTCTGATG +
Preference number: 6 (lower is better)
Translates to: HLFQATSAGLFC*QWFPNLCLRLM
Trigger: CATCAGACGAAGACACAGATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAAGTTGCTTGGAAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320063.10
CDS CAA 90 bp TTCATTAGCTGCTGTATCTTGGCCTCAGAAGCCACTAGAGCGTTTTaGACCTCCATAAATTCCTGTACAGTGACTGGTCCATCTGATAAA +
Preference number: 6 (lower is better)
Translates to: FISCCILASEATRAF*TSINSCTVTGPSDK
Trigger: TTTATCAGATGGACCAGTCACTGTACAGGAATTTATGGAGGTCAAAAACGCTCTAGTGGCTTCTGAGGCCAAGATACAGCAGCTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000547815.5
ENST00000549999.1
ENST00000550186.5
ENST00000551455.5
ENST00000553118.5
CDS TCA 72 bp AACTGTTTTTCTTTCCTCGGACCACATCACAGTGCCTaGGATTCTTCCTTGTACTATGGGATTAAAGCGTCA +
Preference number: 6 (lower is better)
Translates to: NCFSFLGPHHSA*DSSLYYGIKAS
Trigger: TGACGCTTTAATCCCATAGTACAAGGAAGAATCTCAGGCACTGTGATGTGGTCCGAGGAAAGAAAAACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551455.5
CDS GCA 72 bp CTTCCACTCATAATAGACGCAGGGTCCAGCAAAGAATaGTCCCATATAGAGTTAGCACCGTTATTATACAAG +
Preference number: 6 (lower is better)
Translates to: LPLIIDAGSSKE*SHIELAPLLYK
Trigger: CTTGTATAATAACGGTGCTAACTCTATATGGGAGCATTCTTTGCTGGACCCTGCGTCTATTATGAGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547267.2
ENST00000547815.5
ENST00000548643.5
ENST00000550186.5
ENST00000551209.5
ENST00000551455.5
ENST00000553118.5
CDS GCA 72 bp ATAAATCTGAATCTAGGCTCTTCTGCCGGTTTGTTTTaGTTGCAGTGGTTTCCAAATCTGTGTCTTCGTCTG +
Preference number: 6 (lower is better)
Translates to: INLNLGSSAGLF*LQWFPNLCLRL
Trigger: CAGACGAAGACACAGATTTGGAAACCACTGCAAGCAAAACAAACCGGCAGAAGAGCCTAGATTCAGATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000547815.5
ENST00000549999.1
ENST00000550186.5
ENST00000551455.5
ENST00000553118.5
CDS CCA 72 bp CTTTCTGGTTCAGGGCCACAGTTTGTAGCCCTAATGTaGATCTACCATTTCAGATGCATGCTTTTTCATTCA +
Preference number: 6 (lower is better)
Translates to: LSGSGPQFVALM*IYHFRCMLFHS
Trigger: TGAATGAAAAAGCATGCATCTGAAATGGTAGATCCACATTAGGGCTACAAACTGTGGCCCTGAACCAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547267.2
CDS CAA 90 bp TTTCCAAGCAACTTTTTCTGCATAATTCTCAGCTCGTCACTCAAGTaGTTATTCACCTTCATTAGCTGCTGTATCTTGGCCTCAGAAGCC +
Preference number: 6 (lower is better)
Translates to: FPSNFFCIILSSSLK*LFTFISCCILASEA
Trigger: GGCTTCTGAGGCCAAGATACAGCAGCTAATGAAGGTGAATAACAACTTGAGTGACGAGCTGAGAATTATGCAGAAAAAGTTGCTTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547815.5
ENST00000549999.1
CDS CCA 72 bp CCGTCTCTCGCCTGTCAACTTCATCGTACACATCCATaGCAAGTTCTTCAAACAAATGATTACTTAGAGATT +
Preference number: 6 (lower is better)
Translates to: PSLACQLHRTHP*QVLQTNDYLEI
Trigger: AATCTCTAAGTAATCATTTGTTTGAAGAACTTGCCATGGATGTGTACGATGAAGTTGACAGGCGAGAGACGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547815.5
ENST00000550186.5
ENST00000551209.5
ENST00000551455.5
ENST00000553118.5
CDS CAA 72 bp AGCTTTTTCTGCATAATTCTCAGCTCGTCACTCAAGTaGTTATTCACCTTCATTAGCTGCTGTATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SFFCIILSSSLK*LFTFISCCILA
Trigger: GGCCAAGATACAGCAGCTAATGAAGGTGAATAACAACTTGAGTGACGAGCTGAGAATTATGCAGAAAAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355312.8
ENST00000361006.9
ENST00000550186.5
CDS CAA 72 bp ACCTTTTTCTGCATAATTCTCAGCTCGTCACTCAAGTaGTTATTCACCTTCATTAGCTGCTGTATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: TFFCIILSSSLK*LFTFISCCILA
Trigger: GGCCAAGATACAGCAGCTAATGAAGGTGAATAACAACTTGAGTGACGAGCTGAGAATTATGCAGAAAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551455.5
CDS CAA 72 bp TTTGTTTATAAAGCCATCCTCAGGTGGGCCAACTCCTaGGGTACAAATGCAGAATGTAACCTAATGTTGTCT +
Preference number: 6 (lower is better)
Translates to: FVYKAILRWANS*GTNAECNLMLS
Trigger: AGACAACATTAGGTTACATTCTGCATTTGTACCCAAGGAGTTGGCCCACCTGAGGATGGCTTTATAAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546613.5
ENST00000552978.5
CDS TCA 72 bp TGCTGCCATTTCTGTAACAGCTACGTGTATCCTCTCTaGGCAGGGAATATAACTGTCATGTTTATTTTCTTG +
Preference number: 6 (lower is better)
Translates to: CCHFCNSYVYPL*AGNITVMFIFL
Trigger: CAAGAAAATAAACATGACAGTTATATTCCCTGCTCAGAGAGGATACACGTAGCTGTTACAGAAATGGCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000546613.5
ENST00000548000.5
ENST00000550186.5
ENST00000551209.5
ENST00000552978.5
ENST00000553118.5
CDS TCA 72 bp CTGGTCATCTTGTTGGATGGTATGACCTACCTTGGCTaGTTAGGTACAATGTTAATTGAGACTAAAAACACC +
Preference number: 6 (lower is better)
Translates to: LVILLDGMTYLG*LGTMLIETKNT
Trigger: GGTGTTTTTAGTCTCAATTAACATTGTACCTAATCAGCCAAGGTAGGTCATACCATCCAACAAGATGACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547267.2
CDS GCA 72 bp AAAAAGGAGACATTTTTGTTTCAGTATGCTCATCAATaGATCAGGCTGGTCATCTTGTTGGATGGTATGACC +
Preference number: 6 (lower is better)
Translates to: KKETFLFQYAHQ*IRLVILLDGMT
Trigger: GGTCATACCATCCAACAAGATGACCAGCCTGATGCATTGATGAGCATACTGAAACAAAAATGTCTCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547267.2
CDS CCA 72 bp GATGAATTCCGCTTTATTGGGATGTACTTTATCCTGTaGATTAGCTTTACGTCTTCCACTCATAATAGACGC +
Preference number: 6 (lower is better)
Translates to: DEFRFIGMYFIL*ISFTSSTHNRR
Trigger: GCGTCTATTATGAGTGGAAGACGTAAAGCTAATCCACAGGATAAAGTACATCCCAATAAAGCGGAATTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320063.10
ENST00000354574.8
ENST00000355312.8
ENST00000361006.9
ENST00000457474.6
ENST00000547267.2
ENST00000547815.5
ENST00000548643.5
ENST00000550186.5
ENST00000551209.5
ENST00000551455.5
ENST00000553118.5
CDS CAA 72 bp AACTTTTTCTGCATAATTCTCAGCTCGTCACTCAAGTaGTTATTCACCTTCATTAGCTGCTGTATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: NFFCIILSSSLK*LFTFISCCILA
Trigger: GGCCAAGATACAGCAGCTAATGAAGGTGAATAACAACTTGAGTGACGAGCTGAGAATTATGCAGAAAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547815.5
ENST00000549999.1
CDS CCA 72 bp GTAATGTCACTCAAAACAGAAAGCAAATTGTTAAACTaGAGCCAGAACCTAGGCACTCAAACAATAGAAGCA +
Preference number: 6 (lower is better)
Translates to: VMSLKTESKLLN*SQNLGTQTIEA
Trigger: TGCTTCTATTGTTTGAGTGCCTAGGTTCTGGCTCCAGTTTAACAATTTGCTTTCTGTTTTGAGTGACATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549999.1
CDS CAA 90 bp AGAATCATCAACCTTCTTGTGGTAGGTAGATTTCTGAAGTCTACTTaGCATCCCACTTTTATAAACTGTTTTCACCATCTGAACTATCGC +
Preference number: 6 (lower is better)
Translates to: RIINLLVVGRFLKST*HPTFINCFHHLNYR
Trigger: GCGATAGTTCAGATGGTGAAAACAGTTTATAAAAGTGGGATGCAAAGTAGACTTCAGAAATCTACCTACCACAAGAAGGTTGATGATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS CAA 72 bp ATTTACAAGGTAATGTCACTCAAAACAGAAAGCAAATaGTTAAACTGGAGCCAGAACCTAGGCACTCAAACA +
Preference number: 6 (lower is better)
Translates to: IYKVMSLKTESK*LNWSQNLGTQT
Trigger: TGTTTGAGTGCCTAGGTTCTGGCTCCAGTTTAACAATTTGCTTTCTGTTTTGAGTGACATTACCTTGTAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549999.1
CDS CAA 72 bp AACCTTCTTGTGGTAGGTAGATTTCTGAAGTCTACTTaGCATCCCACTTTTATAAACTGTTTTCACCATCTG +
Preference number: 6 (lower is better)
Translates to: NLLVVGRFLKST*HPTFINCFHHL
Trigger: CAGATGGTGAAAACAGTTTATAAAAGTGGGATGCAAAGTAGACTTCAGAAATCTACCTACCACAAGAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551721.1
CDS CAA 72 bp ATCAAAAATATTATAAGCATGCAGAGCCAAAAGCTATaGGTTAAGAGTGCTGCTCTCTCAAAGCTGTTAATA +
Preference number: 6 (lower is better)
Translates to: IKNIISMQSQKL*VKSAALSKLLI
Trigger: TATTAACAGCTTTGAGAGAGCAGCACTCTTAACCAATAGCTTTTGGCTCTGCATGCTTATAATATTTTTGAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548000.5