RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GIT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000108262

Ensembl transcript IDs: ENST00000225394.8, ENST00000335356.7, ENST00000394869.7, ENST00000473217.5, ENST00000491377.1, ENST00000577466.2, ENST00000578266.1, ENST00000578670.5, ENST00000579536.1, ENST00000579937.5, ENST00000581348.5, ENST00000581925.1, ENST00000583413.4, ENST00000585148.1, ENST00000586574.5

Found 652 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTaGGCAGCCGCAGTGAGCTCCGCACTGGCTCCAGGGCTGGCCTCT +
Preference number: 1 (lower is better)
Translates to: ALSSGTHSAAGRRWR*AAAVSSALAPGLAS
Trigger: AGAGGCCAGCCCTGGAGCCAGTGCGGAGCTCACTGCGGCTGCTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR CCA 90 bp CACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTaGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCT +
Preference number: 1 (lower is better)
Translates to: HLLSQQLEVHWGAGL*GHCLPALTLQPVGA
Trigger: AGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR CCA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTaGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTG +
Preference number: 1 (lower is better)
Translates to: IGALDHLLSQQLEVH*GAGLWGHCLPALTL
Trigger: CAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR CCA 90 bp AAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTaGAGTGGCCCAGCTCCTATGGCCAGTGAGGTCCTAGGGTGCAGG +
Preference number: 1 (lower is better)
Translates to: KGTCASGSVGVGINV*SGPAPMASEVLGCR
Trigger: CCTGCACCCTAGGACCTCACTGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
3UTR CCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTaGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAGTGAGG +
Preference number: 1 (lower is better)
Translates to: SVAALRALVPVALLG*GLMSGVAQLLWPVR
Trigger: CCTCACTGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
3UTR-3UTR TCA 90 bp GAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGGGTAGGCGCTGGCGTTaGGCAGCCGCAGTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: EVHWGAGLWGHCLPALTLGRRWR*AAAVSS
Trigger: GGAGCTCACTGCGGCTGCTCAACGCCAGCGCCTACC...CAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR-3UTR CCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTCACTGGCTCCAGGGCTaGCCTCTGGAGGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: HLAARECGSTKGTCASGSHWLQG*PLEGAG
Trigger: TCCTGCCCCCTCCAGAGGCCAGCCCTGGAGCCAGTG...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579937.5
3UTR-3UTR CCA 90 bp GTCATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCCAGCTGGAAGTCCACTaGGGCGCCGGGCTCTGGGGG +
Preference number: 2 (lower is better)
Translates to: VIGALDHLLSQQLEVHWGQLEVH*GAGLWG
Trigger: CCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTG...GCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTATGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR-3UTR CCA 90 bp GGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTCACTGGCTCCAGGGCTaGCCTCTTTGGGAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: GSPLGRRALGALSSGTHSHWLQG*PLWEEG
Trigger: TCCCTCTTCCCAAAGAGGCCAGCCCTGGAGCCAGTG...AGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578670.5
3UTR-3UTR CCA 90 bp CACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACGTGGGGATTAATGTCTaGAGTGGCCCAGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: HLLSQQLEVHWGAGLWGHVGINV*SGPAPM
Trigger: CATAGGAGCTGGGCCACTCCAGACATTAATCCCCAC...GTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR-3UTR CCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTATGGGGCGCCGGGCTCTaGGGGCACTGTCTTCCGGCA +
Preference number: 2 (lower is better)
Translates to: SVAALRALVPVALLGWGLWGAGL*GHCLPA
Trigger: TGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR-3UTR TCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGAGCTCCTATGGCCAGTaGGGTCCTAGGGTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: LPGSVAALRALVPVALLGSSYGQ*GPRVQV
Trigger: CACCTGCACCCTAGGACCTCACTGGCCATAGGAGCT...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
3UTR-3UTR CCA 90 bp GAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGGTGGGGATTAATGTCTaGAGTGGCCCAGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: EVHWGAGLWGHCLPALTLVGINV*SGPAPM
Trigger: CATAGGAGCTGGGCCACTCCAGACATTAATCCCCAC...CAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR-3UTR TCA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGTAGGCGCTGGCGTTaGGCAGCCGCAGTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: CGSTKGTCASGSVGVGINGRRWR*AAAVSS
Trigger: GGAGCTCACTGCGGCTGCTCAACGCCAGCGCCTACC...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR-3UTR CCA 90 bp GCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTCGGTCACAGCCAAATaGATCTTCTCTGAGCAGGGC +
Preference number: 2 (lower is better)
Translates to: ALDHLLSQQLEVHWGAGLSVTAK*IFSEQG
Trigger: GCCCTGCTCAGAGAAGATCCATTTGGCTGTGACCGA...GAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578670.5
3UTR CAA 90 bp CCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTaGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCA +
Preference number: 2 (lower is better)
Translates to: PGSVAALRALVPVAL*GWGLMSGVAQLLWP
Trigger: TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
3UTR-3UTR TCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTTGAGCAGCCGCAGTaGGCTCCGCACTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: ALRALVPVALLGWGLMSGVEQPQ*APHWLQ
Trigger: CTGGAGCCAGTGCGGAGCTCACTGCGGCTGCTCAAC...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR-3UTR CCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGAGGTGCATGGAATGTaGGGGACAGAAGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: LAARECGSTKGTCASGSVEVHGM*GTEAPA
Trigger: GGCAGGAGCTTCTGTCCCCCACATTCCATGCACCTC...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
3UTR-3UTR CCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTGGCTCTGTTGGGGTaGGGATTAATGTCTGGAGTG +
Preference number: 2 (lower is better)
Translates to: HLAARECGSTKGTCASGSVALLG*GLMSGV
Trigger: CACTCCAGACATTAATCCCCACCCCAACAGAGCCAC...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
3UTR-3UTR TCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGCTCCTATGGCCAGTaGGGTCCTAGGGTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: STKGTCASGSVGVGINVWSSYGQ*GPRVQV
Trigger: CACCTGCACCCTAGGACCTCACTGGCCATAGGAGCT...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
3UTR-3UTR GCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCGGGGAGAGAGGTCACTaGTTCTTCTCTCGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: GSTKGTCASGSVGVGINVGERGH*FFSRVV
Trigger: CACCACCCGAGAGAAGAAGCAGTGACCTCTCTCCCC...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR-3UTR CCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGGGCACTTGTGCCAGTaGCTCTGTTGGGGTGGGGAT +
Preference number: 2 (lower is better)
Translates to: ALRALVPVALLGWGLMSGGHLCQ*LCWGGD
Trigger: ATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCC...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
3UTR-3UTR CCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGTGGCTCTGTTGGGGTaGGGATTAATGTCTGGAGTG +
Preference number: 2 (lower is better)
Translates to: SVAALRALVPVALLGWGLVALLG*GLMSGV
Trigger: CACTCCAGACATTAATCCCCACCCCAACAGAGCCAC...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
3UTR-3UTR CCA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTGGGGATTAATGTCTaGAGTGGCCCAGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: CGSTKGTCASGSVGVGINVGINV*SGPAPM
Trigger: CATAGGAGCTGGGCCACTCCAGACATTAATCCCCAC...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
3UTR CCA 72 bp AGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTaGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCG +
Preference number: 3 (lower is better)
Translates to: SQQLEVHWGAGL*GHCLPALTLQP
Trigger: CGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR CCA 72 bp CTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTaGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCA +
Preference number: 3 (lower is better)
Translates to: LDHLLSQQLEVH*GAGLWGHCLPA
Trigger: TGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
3UTR CCA 72 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTaGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGG +
Preference number: 3 (lower is better)
Translates to: ALRALVPVALLG*GLMSGVAQLLW
Trigger: CCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCAGCCGCAGTGAGCTCCGCACTGGCTCCAGGGCTGGCCTCTGGAGGGGGCAGGTGGGGCGCCGGGCTCTaGGGGCACTGTCTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: AAAVSSALAPGLASGGGRWGAGL*GHCLPA
Trigger: TGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA...CCTGCCCCCTCCAGAGGCCAGCCCTGGAGCCAGTGCGGAGCTCACTGCGGCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR TCA 90 bp GCAGCCGCAGTGAGCTCCGCACTGGCTCCAGGGCTGGCCTCTGGAGGGGGCAGGCCAGCACACCCCTGCTaGTGGATGCCCAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AAAVSSALAPGLASGGGRPAHPC*WMPSQG
Trigger: ACCCTGGCTGGGCATCCATCAGCAGGGGTGTGCTGG...CCTGCCCCCTCCAGAGGCCAGCCCTGGAGCCAGTGCGGAGCTCACTGCGGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp GGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTTGCTCCGGGCCCGGTTaGTCCGAGTGGCGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GSPLGRRALGALSSGTHSCSGPG*SEWRRC
Trigger: GCACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCA...AGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp ACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGAGGCCTGGCGATCCCTaGGGTGTGTGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: TGAPGSGGTVFRHSLCSRRPGDP*GVCSRL
Trigger: CAGGCGGGAGCACACACCGCAGGGATCGCCAGGCCT...CCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR GCA 90 bp GCGCTGGCGTTGAGCAGCCGCAGTGAGCTCCGCACTGGCTCCAGGGCTGGCCTCAGGCCTGGCGATCCCTaGGGTGTGTGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: ALALSSRSELRTGSRAGLRPGDP*GVCSRL
Trigger: CAGGCGGGAGCACACACCGCAGGGATCGCCAGGCCT...GAGGCCAGCCCTGGAGCCAGTGCGGAGCTCACTGCGGCTGCTCAACGCCAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp GGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCCAGCTGGAAGTCCACTaGGGCGCCGGGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLWGHCLPALTLQPVGAGQLEVH*GAGLWG
Trigger: CCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTG...GCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR GCA 90 bp ACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGACCAGGGCACCTGGCTaGCAGGGAGTGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TGAPGSGGTVFRHSLCSRTRAPG*QGVWQH
Trigger: GTGCTGCCACACTCCCTGGCAGCCAGGTGCCCTGGT...CCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp CCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGCACTGGCTCCAGGGCTaGCCTCTGGAGGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAESAAGSPLGRRALGALHWLQG*PLEGAG
Trigger: TCCTGCCCCCTCCAGAGGCCAGCCCTGGAGCCAGTG...CAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR TCA 90 bp GGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGCAGCCGCAGTaGGCTCCGCACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLWGHCLPALTLQPVGAGVEQPQ*APHWLQ
Trigger: CTGGAGCCAGTGCGGAGCTCACTGCGGCTGCTCAAC...GCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR GCA 90 bp GCAGCCGCAGTGAGCTCCGCACTGGCTCCAGGGCTGGCCTCTGGAGGGGGCAGGGGTTGTCTGTGGGGCTaGTCAGGCTCTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: AAAVSSALAPGLASGGGRGCLWG*SGSCPA
Trigger: AGCAGGGCAAGAGCCTGAGCAGCCCCACAGACAACC...CCTGCCCCCTCCAGAGGCCAGCCCTGGAGCCAGTGCGGAGCTCACTGCGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CCA 90 bp AGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACCTTTCCGCCAGCTCATaGTGCCCCGCCTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSWKSTGAPGSGGTVFRHLSASS*CPACLA
Trigger: TGCCAGGCAGGCGGGGCACCATGAGCTGGCGGAAAG...GTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CCA 90 bp TGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGTGTGGGCACCGGCCCTaGAGGCTGCCGGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WGHCLPALTLQPVGAGVECGHRP*RLPELQ
Trigger: CTGCAGCTCCGGCAGCCTCCAGGGCCGGTGCCCACA...CTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp GAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCCGTTCACTGGGGAGTaGAGGTGTGGGCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: EVHWGAGLWGHCLPALTLPFTGE*RCGHRP
Trigger: GGGCCGGTGCCCACACCTCCACTCCCCAGTGAACGG...CAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp GGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGCAGCAGCTGGAAGTCCACTaGGGCGCCGGGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GHCLPALTLQPVGAGVEQQLEVH*GAGLWG
Trigger: CCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTG...CTGCTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR TCA 90 bp GCAGCCGCAGTGAGCTCCGCACTGGCTCCAGGGCTGGCCTCTGGAGGGGGCAGGAGCAGGGACGTGCACTaGATAGATGGCGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: AAAVSSALAPGLASGGGRSRDVH*IDGVVL
Trigger: GAGGACGACGCCATCTATTCAGTGCACGTCCCTGCT...CCTGCCCCCTCCAGAGGCCAGCCCTGGAGCCAGTGCGGAGCTCACTGCGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp GCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTGGCTCCGGTGCACGCTaGAGCACTCGTCACACACCA +
Preference number: 4 (lower is better)
Translates to: AAGSPLGRRALGALSSGTGSGAR*STRHTP
Trigger: TGGTGTGTGACGAGTGCTGCAGCGTGCACCGGAGCC...AGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp GGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTCGTCCCAGGCTCCGGTaGACGCTGCAGCACTCGTCA +
Preference number: 4 (lower is better)
Translates to: GSPLGRRALGALSSGTHSRPRLR*TLQHSS
Trigger: TGACGAGTGCTGCAGCGTGCACCGGAGCCTGGGACG...AGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp TGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAAGCGTGTGCACCATCTaGAGCAGCGTGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: WGAGLWGHCLPALTLQPVSVCTI*SSVGGQ
Trigger: CTGGCCTCCCACGCTGCTGCAGATGGTGCACACGCT...TACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp GGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGTTGTGGATCTCTCGCTaGAGCCTCCGGAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: GRRALGALSSGTHSAAGRLWISR*SLRSSS
Trigger: CGACGAGCTCCGGAGGCTGCAGCGAGAGATCCACAA...CCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp AGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACCACTGTCGGCTCCACTaGCGTGGCGGGAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SSWKSTGAPGSGGTVFRHHCRLH*RGGKAC
Trigger: GCAAGCTTTCCCGCCACGGCAGTGGAGCCGACAGTG...GTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CCA 90 bp AGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACGTTCCGCCCGTTCACTaGGGAGTGGAGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SSWKSTGAPGSGGTVFRHVPPVH*GVEVWA
Trigger: TGCCCACACCTCCACTCCCCAGTGAACGGGCGGAAC...GTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR TCA 90 bp TGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTATGGAGGGGGCAGGAGTaGGGCTGGACCTTGGACTTT +
Preference number: 4 (lower is better)
Translates to: WGAGLWGHCLPALTLQPVWRGQE*GWTLDF
Trigger: AAAGTCCAAGGTCCAGCCTCACTCCTGCCCCCTCCA...TACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGCAGGGTCCGGGGCGCTaGAGTCCGCACACACCTCCG +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGQGPGR*SPHTPP
Trigger: CGGAGGTGTGTGCGGACTGCAGCGCCCCGGACCCTG...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGGCCTTGGCAGCCACGTaGAGAGGTGTGGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: EVHWGAGLWGHCLPALTLALAAT*RGVVPF
Trigger: GAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGC...CAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTTCCGAGTGGCGCCGGTaGTGCGCAGGGGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSSEWRR*CAGAPG
Trigger: ACCAGGAGCCCCTGCGCAGCACCGGCGCCACTCGGA...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGTCCGAGTGGCGCCGGTaGTGCGCAGGGGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGSEWRR*CAGAPG
Trigger: ACCAGGAGCCCCTGCGCAGCACCGGCGCCACTCGGA...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTCCGAGTGGCGCCGGTaGTGCGCAGGGGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGSEWRR*CAGAPG
Trigger: ACCAGGAGCCCCTGCGCAGCACCGGCGCCACTCGGA...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCGCTGGCGTTGAGCAGCCGCAGTGAGCTCCGCACTGGCTCCAGGGCTGGCCTCAGTTGGCCCCGTTGCTaGCAAGCGTGTGCACCATCT +
Preference number: 4 (lower is better)
Translates to: ALALSSRSELRTGSRAGLSWPRC*QACAPS
Trigger: AGATGGTGCACACGCTTGCCAGCAACGGGGCCAACT...GAGGCCAGCCCTGGAGCCAGTGCGGAGCTCACTGCGGCTGCTCAACGCCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGTGTGGGCACCGGCCCTaGAGGCTGCCGGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGCGHRP*RLPELQ
Trigger: CTGCAGCTCCGGCAGCCTCCAGGGCCGGTGCCCACA...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGCAGCTGGAAGTCCACTaGGGCGCCGGGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGQLEVH*GAGLWG
Trigger: CCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTG...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGCAGCTGGAAGTCCACTaGGGCGCCGGGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGQLEVH*GAGLWG
Trigger: CCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTG...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACGGGCACTTGTGCCAGTaGCTCTGTTGGGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: HLLSQQLEVHWGAGLWGHGHLCQ*LCWGGD
Trigger: ATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCC...GTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp GGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGGGCACTTGTGCCAGTaGCTCTGTTGGGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GLWGHCLPALTLQPVGAGGHLCQ*LCWGGD
Trigger: ATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCC...GCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR TCA 90 bp GCGCTGGCGTTGAGCAGCCGCAGTGAGCTCCGCACTGGCTCCAGGGCTGGCCTCCTGATTCCGCGTGGCTaGGTATTCCGGGTTAACAGG +
Preference number: 4 (lower is better)
Translates to: ALALSSRSELRTGSRAGLLIPRG*VFRVNR
Trigger: CCTGTTAACCCGGAATACTCAGCCACGCGGAATCAG...GAGGCCAGCCCTGGAGCCAGTGCGGAGCTCACTGCGGCTGCTCAACGCCAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR TCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGGGTAGGCGCTGGCGTTaGGCAGCCGCAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGGRRWR*AAAVSS
Trigger: GGAGCTCACTGCGGCTGCTCAACGCCAGCGCCTACC...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGGTAGGCGCTGGCGTTaGGCAGCCGCAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSGRRWR*AAAVSS
Trigger: GGAGCTCACTGCGGCTGCTCAACGCCAGCGCCTACC...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp TGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTACACTGGATCACCTGCTaGGTCAGCAGCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: WGAGLWGHCLPALTLQPVHWITC*VSSWKS
Trigger: GGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTG...TACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR GCA 90 bp AGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTTGCTGGCAAGCGTGTaGACCATCTGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SSWKSTGAPGSGGTVFRHLLASV*TICSSV
Trigger: CACGCTGCTGCAGATGGTGCACACGCTTGCCAGCAA...GTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp GCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTGACATGTCTCCAGGTTaGCTGTCCGCACGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: AAGSPLGRRALGALSSGTDMSPG*LSARSS
Trigger: ACTCGAGCGTGCGGACAGGCAACCTGGAGACATGTC...AGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp GAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCTCAGGCTCTTGCCCTaGTGTCTCCGCTTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EVHWGAGLWGHCLPALTLLRLLP*CLRLAS
Trigger: TGAGGCCAAGCGGAGACAGCAGGGCAAGAGCCTGAG...CAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCATGCTCCGGGCCCGGTTaGTCCGAGTGGCGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPCSGPG*SEWRRC
Trigger: GCACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCA...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGTGCTCCGGGCCCGGTTaGTCCGAGTGGCGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQCSGPG*SEWRRC
Trigger: GCACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCA...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGGAGGCTGCCGGAGCTaGAGGTTCTCCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSGGCRS*RFSACS
Trigger: GCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCC...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCACCCGGTTGCTCCGAGTaGCGCCGGTGCTGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPPGCSE*RRCCAG
Trigger: CCCTGCGCAGCACCGGCGCCACTCGGAGCAACCGGG...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTCATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCTGGGGCGCCGGGCTCTaGGGGCACTGTCTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: VIGALDHLLSQQLEVHWGWGAGL*GHCLPA
Trigger: TGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA...GCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTATGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp GCAGCCGCAGTGAGCTCCGCACTGGCTCCAGGGCTGGCCTCTGGAGGGGGCAGGGTGGGGATTAATGTCTaGAGTGGCCCAGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: AAAVSSALAPGLASGGGRVGINV*SGPAPM
Trigger: CATAGGAGCTGGGCCACTCCAGACATTAATCCCCAC...CCTGCCCCCTCCAGAGGCCAGCCCTGGAGCCAGTGCGGAGCTCACTGCGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR TCA 90 bp ACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGCAAATGGATCTTCTCTaGGCAGGGCACGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TGAPGSGGTVFRHSLCSRQMDLL*AGHEAV
Trigger: GACAGCTTCGTGCCCTGCTCAGAGAAGATCCATTTG...CCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR TCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTTGAGCAGCCGCAGTaGGCTCCGCACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGVEQPQ*APHWLQ
Trigger: CTGGAGCCAGTGCGGAGCTCACTGCGGCTGCTCAAC...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GTCATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGGTAGGCGCTGGCGTTaGGCAGCCGCAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VIGALDHLLSQQLEVHWGGRRWR*AAAVSS
Trigger: GGAGCTCACTGCGGCTGCTCAACGCCAGCGCCTACC...GCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR GCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGACCCCTGCTGATGGATaGCCAGCCAGGGTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLTPADG*PARVRG
Trigger: GCCCCGGACCCTGGCTGGGCATCCATCAGCAGGGGT...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGCGTCCCAGGCTCCGGTaGACGCTGCAGCACTCGTCA +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGRPRLR*TLQHSS
Trigger: TGACGAGTGCTGCAGCGTGCACCGGAGCCTGGGACG...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTCGTCCCAGGCTCCGGTaGACGCTGCAGCACTCGTCA +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSRPRLR*TLQHSS
Trigger: TGACGAGTGCTGCAGCGTGCACCGGAGCCTGGGACG...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCTTACGCCGGCCGCTCTaGACTTGTGCGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: IGALDHLLSQQLEVHWGALRRPL*TCAGSS
Trigger: GCTGGACCCCGCACAAGTGCAGAGCGGCCGGCGTAA...GGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp TGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGCTGCAGTGTCTGTCCTaGCTTGGCAGCCACGTGCAG +
Preference number: 4 (lower is better)
Translates to: WGHCLPALTLQPVGAGVELQCLS*LGSHVQ
Trigger: CTGCACGTGGCTGCCAAGGCAGGACAGACACTGCAG...CTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTGCTCCGGGCCCGGTTaGTCCGAGTGGCGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMCSGPG*SEWRRC
Trigger: GCACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCA...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGAGGCTGCCGGAGCTaGAGGTTCTCCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVGGCRS*RFSACS
Trigger: GCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCC...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGCCATCTGCAGCAGCGTaGGAGGCCAGGCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLPSAAA*EARRCG
Trigger: GCCACAGCGCCTGGCCTCCCACGCTGCTGCAGATGG...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGCTTTCCGCCAGCTCATaGTGCCCCGCCTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGLSASS*CPACLA
Trigger: TGCCAGGCAGGCGGGGCACCATGAGCTGGCGGAAAG...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTCGTCGAGGTCACTCTaGCTCCGCAGAGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: ALDHLLSQQLEVHWGAGLSSRSL*LRRDSS
Trigger: CGAGCTGTCTCTGCGGAGCCAGAGTGACCTCGACGA...GAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCCCCGGTTGCTCCGAGTaGCGCCGGTGCTGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVPGCSE*RRCCAG
Trigger: CCCTGCGCAGCACCGGCGCCACTCGGAGCAACCGGG...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTTGTGGGCACCGGCCCTaGAGGCTGCCGGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGICGHRP*RLPELQ
Trigger: CTGCAGCTCCGGCAGCCTCCAGGGCCGGTGCCCACA...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTCCCGCCTGGCGCCATaGGTGTGTGTTCCGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGSRLAP*VCVPPV
Trigger: AACGGGCGGAACACACACCCATGGCGCCAGGCGGGA...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCTCCCGCCTGGCGCCATaGGTGTGTGTTCCGCCCGTT +
Preference number: 4 (lower is better)
Translates to: IGALDHLLSQQLEVHWGASRLAP*VCVPPV
Trigger: AACGGGCGGAACACACACCCATGGCGCCAGGCGGGA...GGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp GCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTAGCTCAGTGCTGTaGAAAGGCTGCAGCCGCGTA +
Preference number: 4 (lower is better)
Translates to: AGSPLGRRALGALSSGTHSSSVL*KGCSRV
Trigger: TACGCGGCTGCAGCCTTTCCACAGCACTGAGCTAGA...GTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp AGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCTAGCTCAGTGCTGTaGAAAGGCTGCAGCCGCGTA +
Preference number: 4 (lower is better)
Translates to: SSWKSTGAPGSGGTVFRHSSSVL*KGCSRV
Trigger: TACGCGGCTGCAGCCTTTCCACAGCACTGAGCTAGA...GTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp GGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGCAGGAAAGCTTGCTCGTGTaGCGGCTTCCCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GHCLPALTLQPVGAGVEQESLLV*RLPSWE
Trigger: CTCCCAGGAGGGAAGCCGCCACACGAGCAAGCTTTC...CTGCTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CCA 90 bp TGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTATCATGCTTGAACTCCTaGGCTGCCCGCAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: WGAGLWGHCLPALTLQPVSCLNS*AARNSS
Trigger: GGAACTGTTGCGGGCAGCCCAGGAGTTCAAGCATGA...TACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp TGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGCACTGGCTCCAGGGCTaGCCTCTTTGGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: WGHCLPALTLQPVGAGVEHWLQG*PLWEEG
Trigger: TCCCTCTTCCCAAAGAGGCCAGCCCTGGAGCCAGTG...CTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578670.5
CDS-3UTR CCA 90 bp ACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGGTGGGGATTAATGTCTaGAGTGGCCCAGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: TGAPGSGGTVFRHSLCSRVGINV*SGPAPM
Trigger: CATAGGAGCTGGGCCACTCCAGACATTAATCCCCAC...CCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp ACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTTAAGCCACCAGCTTTaGGAAGAGGGAGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: TGAPGSGGTVFRHSLCSRLSHQL*EEGGHL
Trigger: GAGATGGCCTCCCTCTTCCCAAAGCTGGTGGCTTAA...CCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR TCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTCCAGCACACCCCTGCTaGTGGATGCCCAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVPAHPC*WMPSQG
Trigger: ACCCTGGCTGGGCATCCATCAGCAGGGGTGTGCTGG...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GTCATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGTTGAGCAGCCGCAGTaGGCTCCGCACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VIGALDHLLSQQLEVHWGVEQPQ*APHWLQ
Trigger: CTGGAGCCAGTGCGGAGCTCACTGCGGCTGCTCAAC...GCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTATGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR TCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGTTGAGCAGCCGCAGTaGGCTCCGCACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLVEQPQ*APHWLQ
Trigger: CTGGAGCCAGTGCGGAGCTCACTGCGGCTGCTCAAC...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGGGTAGGCGCTGGCGTTaGGCAGCCGCAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQGRRWR*AAAVSS
Trigger: GGAGCTCACTGCGGCTGCTCAACGCCAGCGCCTACC...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTACAGGGTCCGGGGCGCTaGAGTCCGCACACACCTCCG +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLQGPGR*SPHTPP
Trigger: CGGAGGTGTGTGCGGACTGCAGCGCCCCGGACCCTG...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGCCTTGGCAGCCACGTaGAGAGGTGTGGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSALAAT*RGVVPF
Trigger: GAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGC...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTCCGAGTGGCGCCGGTaGTGCGCAGGGGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVSEWRR*CAGAPG
Trigger: ACCAGGAGCCCCTGCGCAGCACCGGCGCCACTCGGA...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGGCCTGGCGATCCCTaGGGTGTGTGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGIRPGDP*GVCSRL
Trigger: CAGGCGGGAGCACACACCGCAGGGATCGCCAGGCCT...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACCTTGAACTCCTGGGCTaGCCGCAACAGTTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: HLLSQQLEVHWGAGLWGHLELLG*PQQFLN
Trigger: ATTCAGGAACTGTTGCGGGCAGCCCAGGAGTTCAAG...GTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR GCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTACCAGGGCACCTGGCTaGCAGGGAGTGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVTRAPG*QGVWQH
Trigger: GTGCTGCCACACTCCCTGGCAGCCAGGTGCCCTGGT...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCACCATCTGCAGCAGCGTaGGAGGCCAGGCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPPSAAA*EARRCG
Trigger: GCCACAGCGCCTGGCCTCCCACGCTGCTGCAGATGG...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGCTCCCAGATGGAGTTaGCCCCGTTGCTGGCAAGCG +
Preference number: 4 (lower is better)
Translates to: IGALDHLLSQQLEVHWGAAPRWS*PRCWQA
Trigger: CGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGC...GGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGGGAGTGCTCCCAGATaGAGTTGGCCCCGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSGSAPR*SWPRCW
Trigger: CCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCC...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGGGAGTGCTCCCAGATaGAGTTGGCCCCGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGGSAPR*SWPRCW
Trigger: CCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCC...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTCTTTCCGCCAGCTCATaGTGCCCCGCCTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVLSASS*CPACLA
Trigger: TGCCAGGCAGGCGGGGCACCATGAGCTGGCGGAAAG...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGCTTTCCGCCAGCTCATaGTGCCCCGCCTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLLSASS*CPACLA
Trigger: TGCCAGGCAGGCGGGGCACCATGAGCTGGCGGAAAG...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTCCCGGTTGCTCCGAGTaGCGCCGGTGCTGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSPGCSE*RRCCAG
Trigger: CCCTGCGCAGCACCGGCGCCACTCGGAGCAACCGGG...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTCCGTTCACTGGGGAGTaGAGGTGTGGGCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGIPFTGE*RCGHRP
Trigger: GGGCCGGTGCCCACACCTCCACTCCCCAGTGAACGG...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTCCGCCCGTTCACTaGGGAGTGGAGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSVPPVH*GVEVWA
Trigger: TGCCCACACCTCCACTCCCCAGTGAACGGGCGGAAC...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACAGCCAGGTTCATACATaGAAAAGGCCTGGCGATCCC +
Preference number: 4 (lower is better)
Translates to: AGSPLGRRALGALSSGTHSQVHT*KRPGDP
Trigger: GGGATCGCCAGGCCTTTTCCATGTATGAACCTGGCT...GTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp TGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAAGCCAGGTTCATACATaGAAAAGGCCTGGCGATCCC +
Preference number: 4 (lower is better)
Translates to: WGAGLWGHCLPALTLQPVSQVHT*KRPGDP
Trigger: GGGATCGCCAGGCCTTTTCCATGTATGAACCTGGCT...TACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGCAGCTGGAAGTCCACTaGGGCGCCGGGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMQLEVH*GAGLWG
Trigger: CCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTG...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp CCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGGCTCTGTCTTCAAGATaGCATCCTCTGTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PAESAAGSPLGRRALGALALSSR*HPLCWE
Trigger: TTCCCAGCACAGAGGATGTCATCTTGAAGACAGAGC...CAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR TCA 90 bp TGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGCTCTGTCTTCAAGATaGCATCCTCTGTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: WGAGLWGHCLPALTLQPVALSSR*HPLCWE
Trigger: TTCCCAGCACAGAGGATGTCATCTTGAAGACAGAGC...TACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR TCA 90 bp GCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCGCCCGCAACAGTTCCTaGATGTTCTTGGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: ALDHLLSQQLEVHWGAGLARNSS*MFLVTC
Trigger: GCAGGTCACCAAGAACATTCAGGAACTGTTGCGGGC...GAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR TCA 90 bp GGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGCAGGCCCGCAACAGTTCCTaGATGTTCTTGGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: GHCLPALTLQPVGAGVEQARNSS*MFLVTC
Trigger: GCAGGTCACCAAGAACATTCAGGAACTGTTGCGGGC...CTGCTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR TCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGGTAGGCGCTGGCGTTaGGCAGCCGCAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLGRRWR*AAAVSS
Trigger: GGAGCTCACTGCGGCTGCTCAACGCCAGCGCCTACC...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGCAGGGTCCGGGGCGCTaGAGTCCGCACACACCTCCG +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWQGPGR*SPHTPP
Trigger: CGGAGGTGTGTGCGGACTGCAGCGCCCCGGACCCTG...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGCAGGCGCTGTGGCGAAGGTaGTTGACAATGGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: GHCLPALTLQPVGAGVEQALWRR*LTMEMW
Trigger: CCACATCTCCATTGTCAAGCACCTTCGCCACAGCGC...CTGCTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGTTACGCCGGCCGCTCTaGACTTGTGCGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQLRRPL*TCAGSS
Trigger: GCTGGACCCCGCACAAGTGCAGAGCGGCCGGCGTAA...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGCTGCTCAGGCTCTTaGCCTGCTGTCTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLGCSGS*PAVSAW
Trigger: CCAAGCGGAGACAGCAGGGCAAGAGCCTGAGCAGCC...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGGGTTGTCTGTGGGGCTaGTCAGGCTCTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGGCLWG*SGSCPA
Trigger: AGCAGGGCAAGAGCCTGAGCAGCCCCACAGACAACC...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGAGGCCTGGCGATCCCTaGGGTGTGTGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMRPGDP*GVCSRL
Trigger: CAGGCGGGAGCACACACCGCAGGGATCGCCAGGCCT...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGTGCTGTGGAAAGGCTaGAGCCGCGTAGTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: IGALDHLLSQQLEVHWGAVLWKG*SRVVSS
Trigger: CGAGCTCACTACGCGGCTGCAGCCTTTCCACAGCAC...GGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAACCAGGGCACCTGGCTaGCAGGGAGTGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPTRAPG*QGVWQH
Trigger: GTGCTGCCACACTCCCTGGCAGCCAGGTGCCCTGGT...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTACCATCTGCAGCAGCGTaGGAGGCCAGGCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLPSAAA*EARRCG
Trigger: GCCACAGCGCCTGGCCTCCCACGCTGCTGCAGATGG...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGCTCGAGGTTGTCTGTaGGGCTGCTCAGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSARGCL*GCSGSC
Trigger: GCAAGAGCCTGAGCAGCCCCACAGACAACCTCGAGC...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGCTCGAGGTTGTCTGTaGGGCTGCTCAGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGARGCL*GCSGSC
Trigger: GCAAGAGCCTGAGCAGCCCCACAGACAACCTCGAGC...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTCTGCGCAGGGGCTCCTaGTCTGTGTCCTCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVLRRGS*SVSSSE
Trigger: CTCTGACGAGGACACAGACCAGGAGCCCCTGCGCAG...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGCTGCGCAGGGGCTCCTaGTCTGTGTCCTCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLLRRGS*SVSSSE
Trigger: CTCTGACGAGGACACAGACCAGGAGCCCCTGCGCAG...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGTGTGGGCACCGGCCCTaGAGGCTGCCGGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWCGHRP*RLPELQ
Trigger: CTGCAGCTCCGGCAGCCTCCAGGGCCGGTGCCCACA...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCGTTCACTGGGGAGTaGAGGTGTGGGCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPAPFTGE*RCGHRP
Trigger: GGGCCGGTGCCCACACCTCCACTCCCCAGTGAACGG...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTACCGTTCACTGGGGAGTaGAGGTGTGGGCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLPFTGE*RCGHRP
Trigger: GGGCCGGTGCCCACACCTCCACTCCCCAGTGAACGG...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGTTCCGCCCGTTCACTaGGGAGTGGAGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLVPPVH*GVEVWA
Trigger: TGCCCACACCTCCACTCCCCAGTGAACGGGCGGAAC...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGTGTGTGCTCCCGCCTaGCGCCATGGGTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLVCAPA*RHGCVF
Trigger: GAACACACACCCATGGCGCCAGGCGGGAGCACACAC...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTCATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGTGTGTGCTCCCGCCTaGCGCCATGGGTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: VIGALDHLLSQQLEVHWGVCAPA*RHGCVF
Trigger: GAACACACACCCATGGCGCCAGGCGGGAGCACACAC...GCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp CGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTTACATGGAAAAGGCCTaGCGATCCCTGCGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RTGSPAESAAGSPLGRRAYMEKA*RSLRCV
Trigger: CACACACCGCAGGGATCGCCAGGCCTTTTCCATGTA...AGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGTCGGCTCCACTGCCGTaGCGGGAAAGCTTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLSAPLP*RESLLV
Trigger: CACGAGCAAGCTTTCCCGCCACGGCAGTGGAGCCGA...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTCATGCTTGAACTCCTaGGCTGCCCGCAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: ALDHLLSQQLEVHWGAGLSCLNS*AARNSS
Trigger: GGAACTGTTGCGGGCAGCCCAGGAGTTCAAGCATGA...GAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp GGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTTCGGTCACAGCCAAATaGATCTTCTCTGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GSPLGRRALGALSSGTHSSVTAK*IFSEQG
Trigger: GCCCTGCTCAGAGAAGATCCATTTGGCTGTGACCGA...AGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCCAGGGCTGGCCTCTTTaGGAAGAGGGAGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: IGALDHLLSQQLEVHWGAQGWPL*EEGGHL
Trigger: GAGATGGCCTCCCTCTTCCCAAAGAGGCCAGCCCTG...GGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578670.5
CDS-3UTR CCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGTGGGGCGCCGGGCTCTaGGGGCACTGTCTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWWGAGL*GHCLPA
Trigger: TGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGTGGGGCGCCGGGCTCTaGGGGCACTGTCTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVWGAGL*GHCLPA
Trigger: TGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGTGGCTCTGTTGGGGTaGGGATTAATGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GSPLGRRALGALSSGTHSVALLG*GLMSGV
Trigger: CACTCCAGACATTAATCCCCACCCCAACAGAGCCAC...AGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTCCAGTAGGGCTGAACTaGCTCATGGGGGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPPVGLN*LMGVGR
Trigger: GCGCCCCACCCCCATGAGCCAGTTCAGCCCTACTGG...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAGGATGGGGAGAGAGCTaGTGGGTCCCACCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPGWGES*WVPPSA
Trigger: GGCAGACGGTGGGACCCACCAGCTCTCTCCCCATCC...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225394.8
ENST00000394869.7
CDS-3UTR TCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTAGCAGGGACGTGCACTaGATAGATGGCGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSSRDVH*IDGVVL
Trigger: GAGGACGACGCCATCTATTCAGTGCACGTCCCTGCT...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGCGAAGCTGTCATGCTTaGACTCCTGGGCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLRSCHA*TPGLPA
Trigger: TGCGGGCAGCCCAGGAGTTCAAGCATGACAGCTTCG...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGCACTGGATCACCTGCTaGGTCAGCAGCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGHWITC*VSSWKS
Trigger: GGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTG...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGAGCTCCTATGGCCAGTaGGGTCCTAGGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLSSYGQ*GPRVQV
Trigger: CACCTGCACCCTAGGACCTCACTGGCCATAGGAGCT...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTAGCTCCTATGGCCAGTaGGGTCCTAGGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVSSYGQ*GPRVQV
Trigger: CACCTGCACCCTAGGACCTCACTGGCCATAGGAGCT...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAAGCGTGTGCACCATCTaGAGCAGCGTGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPSVCTI*SSVGGQ
Trigger: CTGGCCTCCCACGCTGCTGCAGATGGTGCACACGCT...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTAGCGTGTGCACCATCTaGAGCAGCGTGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPSVCTI*SSVGGQ
Trigger: CTGGCCTCCCACGCTGCTGCAGATGGTGCACACGCT...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGTGGAGTTGGCCCCGTTaGTGGCAAGCGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLWSWPR*WQACAP
Trigger: TGGTGCACACGCTTGCCAGCAACGGGGCCAACTCCA...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTATTACGCCGGCCGCTCTaGACTTGTGCGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLLRRPL*TCAGSS
Trigger: GCTGGACCCCGCACAAGTGCAGAGCGGCCGGCGTAA...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGACATGTCTCCAGGTTaGCTGTCCGCACGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGDMSPG*LSARSS
Trigger: ACTCGAGCGTGCGGACAGGCAACCTGGAGACATGTC...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTGCCTTGGCAGCCACGTaGAGAGGTGTGGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPALAAT*RGVVPF
Trigger: GAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGC...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAGGAAGGGCACGGCACTaGGCTCTGTCACCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPGRARH*ALSPEC
Trigger: GCACTCTGGTGACAGAGCGCAGTGCCGTGCCCTTCC...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTGGAAGGGCACGGCACTaGGCTCTGTCACCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPGRARH*ALSPEC
Trigger: GCACTCTGGTGACAGAGCGCAGTGCCGTGCCCTTCC...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGGGAAGGGCACGGCACTaGGCTCTGTCACCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQGRARH*ALSPEC
Trigger: GCACTCTGGTGACAGAGCGCAGTGCCGTGCCCTTCC...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTGGCTGCTCAGGCTCTTaGCCTGCTGTCTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGIGCSGS*PAVSAW
Trigger: CCAAGCGGAGACAGCAGGGCAAGAGCCTGAGCAGCC...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGAGCTCCAGGTACTCCTaGAGCGTCACAGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLSSRYS*SVTAPS
Trigger: TGACGGGGCTGTGACGCTGCAGGAGTACCTGGAGCT...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGAGCTGCTGCACCTTTaGCTCCGATGTAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLELLHL*LRCSQG
Trigger: GCCCTGGCTACATCGGAGGCAAAGGTGCAGCAGCTC...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGTGCAGGTTCTCCGCCTaGAGCTTGTGGATCTCTCGC +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGCRFSA*SLWISR
Trigger: GCGAGAGATCCACAAGCTGCAGGCGGAGAACCTGCA...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGAGGCTGCCGGAGCTaGAGGTTCTCCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CGSTKGTCASGSVGVGINGGCRS*RFSACS
Trigger: GCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCC...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATAGGCCTGGCGATCCCTaGGGTGTGTGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: CGSTKGTCASGSVGVGINRPGDP*GVCSRL
Trigger: CAGGCGGGAGCACACACCGCAGGGATCGCCAGGCCT...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACGGAAGTCTTCCTCTTTaGCCAGCTCTAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: SSWKSTGAPGSGGTVFRHGSLPL*PALETS
Trigger: AGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCC...GTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR GCA 90 bp GCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTGGAAGTCTTCCTCTTTaGCCAGCTCTAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: AAGSPLGRRALGALSSGTGSLPL*PALETS
Trigger: AGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCC...AGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR GCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGGGGGAGAGAGGTCACTaGTTCTTCTCTCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGGERGH*FFSRVV
Trigger: CACCACCCGAGAGAAGAAGCAGTGACCTCTCTCCCC...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
61% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGGGGAGAGAGGTCACTaGTTCTTCTCTCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGGERGH*FFSRVV
Trigger: CACCACCCGAGAGAAGAAGCAGTGACCTCTCTCCCC...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAACCAGGGCACCTGGCTaGCAGGGAGTGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLTRAPG*QGVWQH
Trigger: GTGCTGCCACACTCCCTGGCAGCCAGGTGCCCTGGT...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGTTGACAATGGAGATGTaGCGTCCCAGGCTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGLTMEM*RPRLRC
Trigger: GCACCGGAGCCTGGGACGCCACATCTCCATTGTCAA...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTCCATCTGCAGCAGCGTaGGAGGCCAGGCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSPSAAA*EARRCG
Trigger: GCCACAGCGCCTGGCCTCCCACGCTGCTGCAGATGG...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGAGTTGGCCCCGTTGCTaGCAAGCGTGTGCACCATCT +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGSWPRC*QACAPS
Trigger: AGATGGTGCACACGCTTGCCAGCAACGGGGCCAACT...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAGCTCCCAGATGGAGTTaGCCCCGTTGCTGGCAAGCG +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPAPRWS*PRCWQA
Trigger: CGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGC...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCCTTTGTCTTGGGGGTTaGCTTTACGCCGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: IGALDHLLSQQLEVHWGALCLGG*LYAGRS
Trigger: AGAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAG...GGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGCTTTGTCTTGGGGGTTaGCTTTACGCCGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGLCLGG*LYAGRS
Trigger: AGAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAG...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTCATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCCTGGGTGGAAGAAGTTaGCCTGGGCACCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VIGALDHLLSQQLEVHWGLGGRS*PGHPGR
Trigger: TCTCCCTGGGTGCCCAGGCCAACTTCTTCCACCCAG...GCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGTCGTCGAGGTCACTCTaGCTCCGCAGAGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLSSRSL*LRRDSS
Trigger: CGAGCTGTCTCTGCGGAGCCAGAGTGACCTCGACGA...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTTCGTCGAGGTCACTCTaGCTCCGCAGAGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVSSRSL*LRRDSS
Trigger: CGAGCTGTCTCTGCGGAGCCAGAGTGACCTCGACGA...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTTGTGGGCACCGGCCCTaGAGGCTGCCGGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSCGHRP*RLPELQ
Trigger: CTGCAGCTCCGGCAGCCTCCAGGGCCGGTGCCCACA...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGACCGTTCACTGGGGAGTaGAGGTGTGGGCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGPFTGE*RCGHRP
Trigger: GGGCCGGTGCCCACACCTCCACTCCCCAGTGAACGG...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTCCCGCCTGGCGCCATaGGTGTGTGTTCCGCCCGTT +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVSRLAP*VCVPPV
Trigger: AACGGGCGGAACACACACCCATGGCGCCAGGCGGGA...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTTCGGCTCCACTGCCGTaGCGGGAAAGCTTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPSAPLP*RESLLV
Trigger: CACGAGCAAGCTTTCCCGCCACGGCAGTGGAGCCGA...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCTTCCAGCCCCAGCAGTaGGTCCCCACTTTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: IGALDHLLSQQLEVHWGAFQPQQ*VPTLRV
Trigger: AACACGCAAAGTGGGGACCCACTGCTGGGGCTGGAA...GGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTCACTGGCTCCAGGGCTaGCCTCTTTGGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVHWLQG*PLWEEG
Trigger: TCCCTCTTCCCAAAGAGGCCAGCCCTGGAGCCAGTG...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTTGGGGCGCCGGGCTCTaGGGGCACTGTCTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSWGAGL*GHCLPA
Trigger: TGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTGTGGCTCTGTTGGGGTaGGGATTAATGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RTGSPAESAAGSPLGRRAVALLG*GLMSGV
Trigger: CACTCCAGACATTAATCCCCACCCCAACAGAGCCAC...AGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGCACTTGTGCCAGTaGCTCTGTTGGGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVGHLCQ*LCWGGD
Trigger: ATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCC...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGAGGTGCATGGAATGTaGGGGACAGAAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSEVHGM*GTEAPA
Trigger: GGCAGGAGCTTCTGTCCCCCACATTCCATGCACCTC...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCGGATGGGGAGAGAGCTaGTGGGTCCCACCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVGWGES*WVPPSA
Trigger: GGCAGACGGTGGGACCCACCAGCTCTCTCCCCATCC...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225394.8
ENST00000394869.7
CDS-3UTR TCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCCAGCACACCCCTGCTaGTGGATGCCCAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVPAHPC*WMPSQG
Trigger: ACCCTGGCTGGGCATCCATCAGCAGGGGTGTGCTGG...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGCCAGCACACCCCTGCTaGTGGATGCCCAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWPAHPC*WMPSQG
Trigger: ACCCTGGCTGGGCATCCATCAGCAGGGGTGTGCTGG...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGCTGATTCCGCGTGGCTaGGTATTCCGGGTTAACAGG +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGLIPRG*VFRVNR
Trigger: CCTGTTAACCCGGAATACTCAGCCACGCGGAATCAG...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTCGAAGCTGTCATGCTTaGACTCCTGGGCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGIRSCHA*TPGLPA
Trigger: TGCGGGCAGCCCAGGAGTTCAAGCATGACAGCTTCG...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTCACTGGATCACCTGCTaGGTCAGCAGCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVHWITC*VSSWKS
Trigger: GGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTG...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAAGCTCCTATGGCCAGTaGGGTCCTAGGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPSSYGQ*GPRVQV
Trigger: CACCTGCACCCTAGGACCTCACTGGCCATAGGAGCT...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTACCCCTGCTGATGGATaGCCAGCCAGGGTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSTPADG*PARVRG
Trigger: GCCCCGGACCCTGGCTGGGCATCCATCAGCAGGGGT...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGGCTCCGGTGCACGCTaGAGCACTCGTCACACACCA +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLGSGAR*STRHTP
Trigger: TGGTGTGTGACGAGTGCTGCAGCGTGCACCGGAGCC...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGCGTCCCAGGCTCCGGTaGACGCTGCAGCACTCGTCA +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWRPRLR*TLQHSS
Trigger: TGACGAGTGCTGCAGCGTGCACCGGAGCCTGGGACG...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTTGGAGTTGGCCCCGTTaGTGGCAAGCGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGIWSWPR*WQACAP
Trigger: TGGTGCACACGCTTGCCAGCAACGGGGCCAACTCCA...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGATTACGCCGGCCGCTCTaGACTTGTGCGGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGLRRPL*TCAGSS
Trigger: GCTGGACCCCGCACAAGTGCAGAGCGGCCGGCGTAA...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGACATGTCTCCAGGTTaGCTGTCCGCACGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVDMSPG*LSARSS
Trigger: ACTCGAGCGTGCGGACAGGCAACCTGGAGACATGTC...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGGCTGCTCAGGCTCTTaGCCTGCTGTCTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLGCSGS*PAVSAW
Trigger: CCAAGCGGAGACAGCAGGGCAAGAGCCTGAGCAGCC...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGGAGCTGCTGCACCTTTaGCTCCGATGTAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQELLHL*LRCSQG
Trigger: GCCCTGGCTACATCGGAGGCAAAGGTGCAGCAGCTC...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTCATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCTGCAGGTTCTCCGCCTaGAGCTTGTGGATCTCTCGC +
Preference number: 4 (lower is better)
Translates to: VIGALDHLLSQQLEVHWGCRFSA*SLWISR
Trigger: GCGAGAGATCCACAAGCTGCAGGCGGAGAACCTGCA...GCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp GTCATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCCGTCCTCTAGCTCAGTaGTGTGGAAAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VIGALDHLLSQQLEVHWGRPLAQ*CGKAAA
Trigger: GGCTGCAGCCTTTCCACAGCACTGAGCTAGAGGACG...GCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR GCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCCACTGTCGGCTCCACTaGCGTGGCGGGAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVHCRLH*RGGKAC
Trigger: GCAAGCTTTCCCGCCACGGCAGTGGAGCCGACAGTG...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCACTGTCGGCTCCACTaGCGTGGCGGGAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPAHCRLH*RGGKAC
Trigger: GCAAGCTTTCCCGCCACGGCAGTGGAGCCGACAGTG...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTCATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGGGGAGAGAGGTCACTaGTTCTTCTCTCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VIGALDHLLSQQLEVHWGGERGH*FFSRVV
Trigger: CACCACCCGAGAGAAGAAGCAGTGACCTCTCTCCCC...GCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR GCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGACCAGGGCACCTGGCTaGCAGGGAGTGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWTRAPG*QGVWQH
Trigger: GTGCTGCCACACTCCCTGGCAGCCAGGTGCCCTGGT...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCGCTCCCAGATGGAGTTaGCCCCGTTGCTGGCAAGCG +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVAPRWS*PRCWQA
Trigger: CGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGC...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGGGAGTGCTCCCAGATaGAGTTGGCCCCGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMGSAPR*SWPRCW
Trigger: CCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCC...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTTCTGACTTGATGGGGTaGACTTTGTCTTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: RTGSPAESAAGSPLGRRASDLMG*TLSWGL
Trigger: CAACCCCCAAGACAAAGTCCACCCCATCAAGTCAGA...AGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCACTGGGTGGAAGAAGTTaGCCTGGGCACCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPLGGRS*PGHPGR
Trigger: TCTCCCTGGGTGCCCAGGCCAACTTCTTCCACCCAG...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGTGCCCTTCTCTGGGTaGAAGAAGTTGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVVPFSG*KKLAWA
Trigger: TGCCCAGGCCAACTTCTTCCACCCAGAGAAGGGCAC...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGGTGTCTGTCCTGCCTTaGCAGCCACGTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQVSVLP*QPRAEV
Trigger: CACCTCTGCACGTGGCTGCCAAGGCAGGACAGACAC...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTGGTGCCCCGCCTGCCTaGCATAGTCAATGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPAGAPPA*HSQWVC
Trigger: GCACACCCATTGACTATGCCAGGCAGGCGGGGCACC...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGCTGCGCAGGGGCTCCTaGTCTGTGTCCTCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMLRRGS*SVSSSE
Trigger: CTCTGACGAGGACACAGACCAGGAGCCCCTGCGCAG...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCCTGCGCAGGGGCTCCTaGTCTGTGTCCTCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVLRRGS*SVSSSE
Trigger: CTCTGACGAGGACACAGACCAGGAGCCCCTGCGCAG...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTGTTCCGCCCGTTCACTaGGGAGTGGAGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPAVPPVH*GVEVWA
Trigger: TGCCCACACCTCCACTCCCCAGTGAACGGGCGGAAC...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCGTTCCGCCCGTTCACTaGGGAGTGGAGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVVPPVH*GVEVWA
Trigger: TGCCCACACCTCCACTCCCCAGTGAACGGGCGGAAC...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGTCCCGCCTGGCGCCATaGGTGTGTGTTCCGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVSRLAP*VCVPPV
Trigger: AACGGGCGGAACACACACCCATGGCGCCAGGCGGGA...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGTGTGTGCTCCCGCCTaGCGCCATGGGTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLVCAPA*RHGCVF
Trigger: GAACACACACCCATGGCGCCAGGCGGGAGCACACAC...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGTACATGGAAAAGGCCTaGCGATCCCTGCGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGYMEKA*RSLRCV
Trigger: CACACACCGCAGGGATCGCCAGGCCTTTTCCATGTA...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTCTAGCTCAGTGCTGTaGAAAGGCTGCAGCCGCGTA +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGSSSVL*KGCSRV
Trigger: TACGCGGCTGCAGCCTTTCCACAGCACTGAGCTAGA...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTTCGGCTCCACTGCCGTaGCGGGAAAGCTTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPASAPLP*RESLLV
Trigger: CACGAGCAAGCTTTCCCGCCACGGCAGTGGAGCCGA...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCAGGGCTGGCCTCTTTaGGAAGAGGGAGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQQGWPL*EEGGHL
Trigger: GAGATGGCCTCCCTCTTCCCAAAGAGGCCAGCCCTG...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGCCAGTAGGGCTGAACTaGCTCATGGGGGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWPVGLN*LMGVGR
Trigger: GCGCCCCACCCCCATGAGCCAGTTCAGCCCTACTGG...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGACCAGTAGGGCTGAACTaGCTCATGGGGGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGPVGLN*LMGVGR
Trigger: GCGCCCCACCCCCATGAGCCAGTTCAGCCCTACTGG...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000581348.5
CDS-3UTR CCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGTGGCAGGACCAAAACTaGCTACCCGGACAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLWQDQN*LPGQSL
Trigger: CAGGGACTGTCCGGGTAGCCAGTTTTGGTCCTGCCA...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225394.8
ENST00000394869.7
CDS-3UTR TCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTAGCAGGGACGTGCACTaGATAGATGGCGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPSRDVH*IDGVVL
Trigger: GAGGACGACGCCATCTATTCAGTGCACGTCCCTGCT...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGCAGGGACGTGCACTaGATAGATGGCGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGISRDVH*IDGVVL
Trigger: GAGGACGACGCCATCTATTCAGTGCACGTCCCTGCT...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGCCCGCAACAGTTCCTaGATGTTCTTGGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLARNSS*MFLVTC
Trigger: GCAGGTCACCAAGAACATTCAGGAACTGTTGCGGGC...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCCGAAGCTGTCATGCTTaGACTCCTGGGCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVRSCHA*TPGLPA
Trigger: TGCGGGCAGCCCAGGAGTTCAAGCATGACAGCTTCG...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGTTGAGCAGCCGCAGTaGGCTCCGCACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSVEQPQ*APHWLQ
Trigger: CTGGAGCCAGTGCGGAGCTCACTGCGGCTGCTCAAC...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGAGCTCCTATGGCCAGTaGGGTCCTAGGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMSSYGQ*GPRVQV
Trigger: CACCTGCACCCTAGGACCTCACTGGCCATAGGAGCT...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGGCTCCGGTGCACGCTaGAGCACTCGTCACACACCA +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVGSGAR*STRHTP
Trigger: TGGTGTGTGACGAGTGCTGCAGCGTGCACCGGAGCC...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGGCTCCGGTGCACGCTaGAGCACTCGTCACACACCA +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGGSGAR*STRHTP
Trigger: TGGTGTGTGACGAGTGCTGCAGCGTGCACCGGAGCC...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGCGCTGTGGCGAAGGTaGTTGACAATGGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLALWRR*LTMEMW
Trigger: CCACATCTCCATTGTCAAGCACCTTCGCCACAGCGC...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTTTGCTGGCAAGCGTGTaGACCATCTGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPLLASV*TICSSV
Trigger: CACGCTGCTGCAGATGGTGCACACGCTTGCCAGCAA...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTTTGCTGGCAAGCGTGTaGACCATCTGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGILLASV*TICSSV
Trigger: CACGCTGCTGCAGATGGTGCACACGCTTGCCAGCAA...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTTGGCCCCGTTaGTGGCAAGCGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVWSWPR*WQACAP
Trigger: TGGTGCACACGCTTGCCAGCAACGGGGCCAACTCCA...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTACTGCAGTGTCTGTCCTaGCTTGGCAGCCACGTGCAG +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLLQCLS*LGSHVQ
Trigger: CTGCACGTGGCTGCCAAGGCAGGACAGACACTGCAG...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCTCTTGTGATCCGGCTTaGGTCCACAGAGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: IGALDHLLSQQLEVHWGASCDPA*VHRGRR
Trigger: CCTTCTACCTCTGTGGACGCAAGCCGGATCACAAGA...GGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTCGGTTGCTGAGCGCCTaGAGCTTCTTCTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVRLLSA*SFFLAA
Trigger: AGCTGCTAAGAAGAAGCTGCAGGCGCTCAGCAACCG...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGGGTAGCCAGCCACACTaGATCATTTTCTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: WGHCLPALTLQPVGAGVEGSQPH*IIFSSI
Trigger: GATCGAAGAGAAAATGATGCAGTGTGGCTGGCTACC...CTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR GCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGGGCTGCTCAGGCTCTTaGCCTGCTGTCTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWGCSGS*PAVSAW
Trigger: CCAAGCGGAGACAGCAGGGCAAGAGCCTGAGCAGCC...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTAGCTCCAGGTACTCCTaGAGCGTCACAGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPASSRYS*SVTAPS
Trigger: TGACGGGGCTGTGACGCTGCAGGAGTACCTGGAGCT...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGTGCTGTGGAAAGGCTaGAGCCGCGTAGTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMVLWKG*SRVVSS
Trigger: CGAGCTCACTACGCGGCTGCAGCCTTTCCACAGCAC...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGTGCTGTGGAAAGGCTaGAGCCGCGTAGTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLVLWKG*SRVVSS
Trigger: CGAGCTCACTACGCGGCTGCAGCCTTTCCACAGCAC...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTCGTCCTCTAGCTCAGTaGTGTGGAAAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGIRPLAQ*CGKAAA
Trigger: GGCTGCAGCCTTTCCACAGCACTGAGCTAGAGGACG...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCACGTCCTCTAGCTCAGTaGTGTGGAAAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPRPLAQ*CGKAAA
Trigger: GGCTGCAGCCTTTCCACAGCACTGAGCTAGAGGACG...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGCTTGAACTCCTGGGCTaGCCGCAACAGTTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGLELLG*PQQFLN
Trigger: ATTCAGGAACTGTTGCGGGCAGCCCAGGAGTTCAAG...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTGGCACGAAGCTGTCATaGTTGAACTCCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGIGTKLS*LNSWAA
Trigger: GGCAGCCCAGGAGTTCAAGCATGACAGCTTCGTGCC...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAGGCACGAAGCTGTCATaGTTGAACTCCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPGTKLS*LNSWAA
Trigger: GGCAGCCCAGGAGTTCAAGCATGACAGCTTCGTGCC...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAGGGGAGAGAGGTCACTaGTTCTTCTCTCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPGERGH*FFSRVV
Trigger: CACCACCCGAGAGAAGAAGCAGTGACCTCTCTCCCC...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTTTGACAATGGAGATGTaGCGTCCCAGGCTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPLTMEM*RPRLRC
Trigger: GCACCGGAGCCTGGGACGCCACATCTCCATTGTCAA...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAAGTTGGCCCCGTTGCTaGCAAGCGTGTGCACCATCT +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPSWPRC*QACAPS
Trigger: AGATGGTGCACACGCTTGCCAGCAACGGGGCCAACT...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGGGAGTGCTCCCAGATaGAGTTGGCCCCGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGGSAPR*SWPRCW
Trigger: CCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCC...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTCTTTGTCTTGGGGGTTaGCTTTACGCCGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPLCLGG*LYAGRS
Trigger: AGAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAG...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCTGGGTGGAAGAAGTTaGCCTGGGCACCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPALGGRS*PGHPGR
Trigger: TCTCCCTGGGTGCCCAGGCCAACTTCTTCCACCCAG...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAGTGCCCTTCTCTGGGTaGAAGAAGTTGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPVPFSG*KKLAWA
Trigger: TGCCCAGGCCAACTTCTTCCACCCAGAGAAGGGCAC...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTGTGCCCTTCTCTGGGTaGAAGAAGTTGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGIVPFSG*KKLAWA
Trigger: TGCCCAGGCCAACTTCTTCCACCCAGAGAAGGGCAC...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCGTGTCTGTCCTGCCTTaGCAGCCACGTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVVSVLP*QPRAEV
Trigger: CACCTCTGCACGTGGCTGCCAAGGCAGGACAGACAC...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTGTGTCTGTCCTGCCTTaGCAGCCACGTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPAVSVLP*QPRAEV
Trigger: CACCTCTGCACGTGGCTGCCAAGGCAGGACAGACAC...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGTGCCCCGCCTGCCTaGCATAGTCAATGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: CGSTKGTCASGSVGVGINGAPPA*HSQWVC
Trigger: GCACACCCATTGACTATGCCAGGCAGGCGGGGCACC...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGGGTGCCCCGCCTGCCTaGCATAGTCAATGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWGAPPA*HSQWVC
Trigger: GCACACCCATTGACTATGCCAGGCAGGCGGGGCACC...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGGTGCCCCGCCTGCCTaGCATAGTCAATGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVGAPPA*HSQWVC
Trigger: GCACACCCATTGACTATGCCAGGCAGGCGGGGCACC...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGCTCGAGGTTGTCTGTaGGGCTGCTCAGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMARGCL*GCSGSC
Trigger: GCAAGAGCCTGAGCAGCCCCACAGACAACCTCGAGC...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTATCGTCGAGGTCACTCTaGCTCCGCAGAGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLSSRSL*LRRDSS
Trigger: CGAGCTGTCTCTGCGGAGCCAGAGTGACCTCGACGA...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTGTGTGCTCCCGCCTaGCGCCATGGGTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: CGSTKGTCASGSVGVGINVCAPA*RHGCVF
Trigger: GAACACACACCCATGGCGCCAGGCGGGAGCACACAC...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGGTGTGTGCTCCCGCCTaGCGCCATGGGTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWVCAPA*RHGCVF
Trigger: GAACACACACCCATGGCGCCAGGCGGGAGCACACAC...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGTCTAGCTCAGTGCTGTaGAAAGGCTGCAGCCGCGTA +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLSSSVL*KGCSRV
Trigger: TACGCGGCTGCAGCCTTTCCACAGCACTGAGCTAGA...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGAAAGCTTGCTCGTGTaGCGGCTTCCCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLESLLV*RLPSWE
Trigger: CTCCCAGGAGGGAAGCCGCCACACGAGCAAGCTTTC...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
CDS-3UTR CCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCGAAAGCTTGCTCGTGTaGCGGCTTCCCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVESLLV*RLPSWE
Trigger: CTCCCAGGAGGGAAGCCGCCACACGAGCAAGCTTTC...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
CDS-3UTR CCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTCTTTCCAGCTCTGGGTaGAAGTCTTCCTCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSLSSSG*KSSSLP
Trigger: GGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAG...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGTCATGCTTGAACTCCTaGGCTGCCCGCAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLSCLNS*AARNSS
Trigger: GGAACTGTTGCGGGCAGCCCAGGAGTTCAAGCATGA...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTTCGGTCACAGCCAAATaGATCTTCTCTGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSSVTAK*IFSEQG
Trigger: GCCCTGCTCAGAGAAGATCCATTTGGCTGTGACCGA...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTaGAGTGGCCCAGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGVGINV*SGPAPM
Trigger: CATAGGAGCTGGGCCACTCCAGACATTAATCCCCAC...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGCTCTGTTGGGGTaGGGATTAATGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: AARECGSTKGTCASGSVGVALLG*GLMSGV
Trigger: CACTCCAGACATTAATCCCCACCCCAACAGAGCCAC...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGGGCACTTGTGCCAGTaGCTCTGTTGGGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLGHLCQ*LCWGGD
Trigger: ATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCC...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTGGGCACTTGTGCCAGTaGCTCTGTTGGGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPAGHLCQ*LCWGGD
Trigger: ATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCC...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGGAGGTGCATGGAATGTaGGGGACAGAAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQEVHGM*GTEAPA
Trigger: GGCAGGAGCTTCTGTCCCCCACATTCCATGCACCTC...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGCCCTGATGAACTCTaGCTTGATGGGGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLGPDEL*LDGVDF
Trigger: AAAGTCCACCCCATCAAGTCAGAGTTCATCAGGGCC...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGCCCTGATGAACTCTaGCTTGATGGGGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVGPDEL*LDGVDF
Trigger: AAAGTCCACCCCATCAAGTCAGAGTTCATCAGGGCC...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGGCCAGCCGGTCAGTaGGCTCATATTGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGIRPAGQ*AHIGTQ
Trigger: TTGAGTGCCAATATGAGCTCACTGACCGGCTGGCCT...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTGATTCCGCGTGGCTaGGTATTCCGGGTTAACAGG +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQLIPRG*VFRVNR
Trigger: CCTGTTAACCCGGAATACTCAGCCACGCGGAATCAG...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAAGCAGGGACGTGCACTaGATAGATGGCGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLSRDVH*IDGVVL
Trigger: GAGGACGACGCCATCTATTCAGTGCACGTCCCTGCT...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTGCCCGCAACAGTTCCTaGATGTTCTTGGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPARNSS*MFLVTC
Trigger: GCAGGTCACCAAGAACATTCAGGAACTGTTGCGGGC...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGCGAAGCTGTCATGCTTaGACTCCTGGGCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWRSCHA*TPGLPA
Trigger: TGCGGGCAGCCCAGGAGTTCAAGCATGACAGCTTCG...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTCAAATGGATCTTCTCTaGGCAGGGCACGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVQMDLL*AGHEAV
Trigger: GACAGCTTCGTGCCCTGCTCAGAGAAGATCCATTTG...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTAGCGTGTGCACCATCTaGAGCAGCGTGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSSVCTI*SSVGGQ
Trigger: CTGGCCTCCCACGCTGCTGCAGATGGTGCACACGCT...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTTGCTGGCAAGCGTGTaGACCATCTGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMLLASV*TICSSV
Trigger: CACGCTGCTGCAGATGGTGCACACGCTTGCCAGCAA...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCCTTGGCAGCCACGTaGAGAGGTGTGGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSALAAT*RGVVPF
Trigger: GAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGC...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGACTGCAGTGTCTGTCCTaGCTTGGCAGCCACGTGCAG +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGLQCLS*LGSHVQ
Trigger: CTGCACGTGGCTGCCAAGGCAGGACAGACACTGCAG...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTCTCAGGCTCTTGCCCTaGTGTCTCCGCTTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSLRLLP*CLRLAS
Trigger: TGAGGCCAAGCGGAGACAGCAGGGCAAGAGCCTGAG...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGTTGTCTGTGGGGCTaGTCAGGCTCTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: CGSTKGTCASGSVGVGINGCLWG*SGSCPA
Trigger: AGCAGGGCAAGAGCCTGAGCAGCCCCACAGACAACC...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGCTCCAGGTACTCCTaGAGCGTCACAGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWSSRYS*SVTAPS
Trigger: TGACGGGGCTGTGACGCTGCAGGAGTACCTGGAGCT...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGAGCTGCTGCACCTTTaGCTCCGATGTAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSELLHL*LRCSQG
Trigger: GCCCTGGCTACATCGGAGGCAAAGGTGCAGCAGCTC...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGAGCTGCTGCACCTTTaGCTCCGATGTAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CGSTKGTCASGSVGVGINELLHL*LRCSQG
Trigger: GCCCTGGCTACATCGGAGGCAAAGGTGCAGCAGCTC...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTTTGTGGATCTCTCGCTaGAGCCTCCGGAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSLWISR*SLRSSS
Trigger: CGACGAGCTCCGGAGGCTGCAGCGAGAGATCCACAA...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGTTGTGGATCTCTCGCTaGAGCCTCCGGAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWLWISR*SLRSSS
Trigger: CGACGAGCTCCGGAGGCTGCAGCGAGAGATCCACAA...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATTTGTGGATCTCTCGCTaGAGCCTCCGGAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: CGSTKGTCASGSVGVGINLWISR*SLRSSS
Trigger: CGACGAGCTCCGGAGGCTGCAGCGAGAGATCCACAA...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCTGTGGAAAGGCTaGAGCCGCGTAGTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGVLWKG*SRVVSS
Trigger: CGAGCTCACTACGCGGCTGCAGCCTTTCCACAGCAC...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGGTGCTGTGGAAAGGCTaGAGCCGCGTAGTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWVLWKG*SRVVSS
Trigger: CGAGCTCACTACGCGGCTGCAGCCTTTCCACAGCAC...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCGTCCTCTAGCTCAGTaGTGTGGAAAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPARPLAQ*CGKAAA
Trigger: GGCTGCAGCCTTTCCACAGCACTGAGCTAGAGGACG...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGCGTCCTCTAGCTCAGTaGTGTGGAAAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMRPLAQ*CGKAAA
Trigger: GGCTGCAGCCTTTCCACAGCACTGAGCTAGAGGACG...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTGGCACGAAGCTGTCATaGTTGAACTCCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPAGTKLS*LNSWAA
Trigger: GGCAGCCCAGGAGTTCAAGCATGACAGCTTCGTGCC...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGAGGCCAGGCGCTGTaGCGAAGGTGCTTGACAATG +
Preference number: 4 (lower is better)
Translates to: CGSTKGTCASGSVGVGINGGQAL*RRCLTM
Trigger: CATTGTCAAGCACCTTCGCCACAGCGCCTGGCCTCC...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTAGTTGGCCCCGTTGCTaGCAAGCGTGTGCACCATCT +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPASWPRC*QACAPS
Trigger: AGATGGTGCACACGCTTGCCAGCAACGGGGCCAACT...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTTCTGACTTGATGGGGTaGACTTTGTCTTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSSDLMG*TLSWGL
Trigger: CAACCCCCAAGACAAAGTCCACCCCATCAAGTCAGA...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTCTGGGTGGAAGAAGTTaGCCTGGGCACCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSLGGRS*PGHPGR
Trigger: TCTCCCTGGGTGCCCAGGCCAACTTCTTCCACCCAG...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTGTGCCCTTCTCTGGGTaGAAGAAGTTGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPAVPFSG*KKLAWA
Trigger: TGCCCAGGCCAACTTCTTCCACCCAGAGAAGGGCAC...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTCGTCATACACGTCCATaGCGAGTTCCTCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSRHTRP*RVPQKA
Trigger: GGCTTTTTGAGGAACTCGCCATGGACGTGTATGACG...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTAGAGTGCTGTGGTTTTaGGTAGCCAGCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVRVLWF*VASHTA
Trigger: TGCAGTGTGGCTGGCTACCCAAAACCACAGCACTCT...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGCTCGAGGTTGTCTGTaGGGCTGCTCAGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSARGCL*GCSGSC
Trigger: GCAAGAGCCTGAGCAGCCCCACAGACAACCTCGAGC...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGTACATGGAAAAGGCCTaGCGATCCCTGCGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQYMEKA*RSLRCV
Trigger: CACACACCGCAGGGATCGCCAGGCCTTTTCCATGTA...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCATACATGGAAAAGGCCTaGCGATCCCTGCGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPYMEKA*RSLRCV
Trigger: CACACACCGCAGGGATCGCCAGGCCTTTTCCATGTA...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTCGTGCACTGAATAGATaGCGTCGTCCTCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVRALNR*RRPLAQ
Trigger: CTGAGCTAGAGGACGACGCCATCTATTCAGTGCACG...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTTCGGCTCCACTGCCGTaGCGGGAAAGCTTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSSAPLP*RESLLV
Trigger: CACGAGCAAGCTTTCCCGCCACGGCAGTGGAGCCGA...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGCTTTCCAGCTCTGGGTaGAAGTCTTCCTCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLLSSSG*KSSSLP
Trigger: GGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAG...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGACAGGGCTGGCCTCTTTaGGAAGAGGGAGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGQGWPL*EEGGHL
Trigger: GAGATGGCCTCCCTCTTCCCAAAGAGGCCAGCCCTG...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGCACTGGCTCCAGGGCTaGCCTCTTTGGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWHWLQG*PLWEEG
Trigger: TCCCTCTTCCCAAAGAGGCCAGCCCTGGAGCCAGTG...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTCACTGGCTCCAGGGCTaGCCTCTTTGGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSHWLQG*PLWEEG
Trigger: TCCCTCTTCCCAAAGAGGCCAGCCCTGGAGCCAGTG...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGTGGGGATTAATGTCTaGAGTGGCCCAGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: WLPGSVAALRALVPVALLVGINV*SGPAPM
Trigger: CATAGGAGCTGGGCCACTCCAGACATTAATCCCCAC...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTGGCAGGACCAAAACTaGCTACCCGGACAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMWQDQN*LPGQSL
Trigger: CAGGGACTGTCCGGGTAGCCAGTTTTGGTCCTGCCA...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225394.8
ENST00000394869.7
CDS-3UTR TCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAAGGCCAGCCGGTCAGTaGGCTCATATTGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLRPAGQ*AHIGTQ
Trigger: TTGAGTGCCAATATGAGCTCACTGACCGGCTGGCCT...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTAGGCCAGCCGGTCAGTaGGCTCATATTGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPARPAGQ*AHIGTQ
Trigger: TTGAGTGCCAATATGAGCTCACTGACCGGCTGGCCT...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGAGGCCAGCCGGTCAGTaGGCTCATATTGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMRPAGQ*AHIGTQ
Trigger: TTGAGTGCCAATATGAGCTCACTGACCGGCTGGCCT...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCCTGATTCCGCGTGGCTaGGTATTCCGGGTTAACAGG +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVLIPRG*VFRVNR
Trigger: CCTGTTAACCCGGAATACTCAGCCACGCGGAATCAG...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGCCCGCAACAGTTCCTaGATGTTCTTGGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLARNSS*MFLVTC
Trigger: GCAGGTCACCAAGAACATTCAGGAACTGTTGCGGGC...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCGCGCTGTGGCGAAGGTaGTTGACAATGGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVALWRR*LTMEMW
Trigger: CCACATCTCCATTGTCAAGCACCTTCGCCACAGCGC...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTGCGCTGTGGCGAAGGTaGTTGACAATGGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPAALWRR*LTMEMW
Trigger: CCACATCTCCATTGTCAAGCACCTTCGCCACAGCGC...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTTGGAGTTGGCCCCGTTaGTGGCAAGCGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSWSWPR*WQACAP
Trigger: TGGTGCACACGCTTGCCAGCAACGGGGCCAACTCCA...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGAAGCTTGTGCACAAATaGCAGCATCTGGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGKLVHK*QHLVLG
Trigger: GCCAAGTACCAGATGCTGGCATTTGTGCACAAGCTT...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGACATGTCTCCAGGTTaGCTGTCCGCACGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGDMSPG*LSARSS
Trigger: ACTCGAGCGTGCGGACAGGCAACCTGGAGACATGTC...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCATCTTGTGATCCGGCTTaGGTCCACAGAGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPSCDPA*VHRGRR
Trigger: CCTTCTACCTCTGTGGACGCAAGCCGGATCACAAGA...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCGGTTGCTGAGCGCCTaGAGCTTCTTCTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPARLLSA*SFFLAA
Trigger: AGCTGCTAAGAAGAAGCTGCAGGCGCTCAGCAACCG...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTACGGTTGCTGAGCGCCTaGAGCTTCTTCTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLRLLSA*SFFLAA
Trigger: AGCTGCTAAGAAGAAGCTGCAGGCGCTCAGCAACCG...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTCTCAGGCTCTTGCCCTaGTGTCTCCGCTTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSLRLLP*CLRLAS
Trigger: TGAGGCCAAGCGGAGACAGCAGGGCAAGAGCCTGAG...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGTTGTCTGTGGGGCTaGTCAGGCTCTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSGCLWG*SGSCPA
Trigger: AGCAGGGCAAGAGCCTGAGCAGCCCCACAGACAACC...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTAGCTCCAGGTACTCCTaGAGCGTCACAGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSSSRYS*SVTAPS
Trigger: TGACGGGGCTGTGACGCTGCAGGAGTACCTGGAGCT...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGTGCAGGTTCTCCGCCTaGAGCTTGTGGATCTCTCGC +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWCRFSA*SLWISR
Trigger: GCGAGAGATCCACAAGCTGCAGGCGGAGAACCTGCA...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATTGCAGGTTCTCCGCCTaGAGCTTGTGGATCTCTCGC +
Preference number: 4 (lower is better)
Translates to: CGSTKGTCASGSVGVGINCRFSA*SLWISR
Trigger: GCGAGAGATCCACAAGCTGCAGGCGGAGAACCTGCA...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGGGAAGTCTTCCTCTTTaGCCAGCTCTAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGGSLPL*PALETS
Trigger: AGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCC...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTCTTGAACTCCTGGGCTaGCCGCAACAGTTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGILELLG*PQQFLN
Trigger: ATTCAGGAACTGTTGCGGGCAGCCCAGGAGTTCAAG...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGGCACGAAGCTGTCATaGTTGAACTCCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGGTKLS*LNSWAA
Trigger: GGCAGCCCAGGAGTTCAAGCATGACAGCTTCGTGCC...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGGGGGAGAGAGGTCACTaGTTCTTCTCTCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWGERGH*FFSRVV
Trigger: CACCACCCGAGAGAAGAAGCAGTGACCTCTCTCCCC...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGTTGACAATGGAGATGTaGCGTCCCAGGCTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVLTMEM*RPRLRC
Trigger: GCACCGGAGCCTGGGACGCCACATCTCCATTGTCAA...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCTTTGTCTTGGGGGTTaGCTTTACGCCGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVLCLGG*LYAGRS
Trigger: AGAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAG...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTTCTGACTTGATGGGGTaGACTTTGTCTTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVSDLMG*TLSWGL
Trigger: CAACCCCCAAGACAAAGTCCACCCCATCAAGTCAGA...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGACAAATGCCAGCATCTaGTACTTGGCCCTGATGAAC +
Preference number: 4 (lower is better)
Translates to: LPGSVAALRALVPVALLGTNASI*YLALMN
Trigger: GTTCATCAGGGCCAAGTACCAGATGCTGGCATTTGT...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTACAAATGCCAGCATCTaGTACTTGGCCCTGATGAAC +
Preference number: 4 (lower is better)
Translates to: HLAARECGSTKGTCASGSTNASI*YLALMN
Trigger: GTTCATCAGGGCCAAGTACCAGATGCTGGCATTTGT...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTCGTCATACACGTCCATaGCGAGTTCCTCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LAARECGSTKGTCASGSVRHTRP*RVPQKA
Trigger: GGCTTTTTGAGGAACTCGCCATGGACGTGTATGACG...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGCCAGGTTCATACATaGAAAAGGCCTGGCGATCCC +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGISQVHT*KRPGDP
Trigger: GGGATCGCCAGGCCTTTTCCATGTATGAACCTGGCT...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTAGCCAGGTTCATACATaGAAAAGGCCTGGCGATCCC +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPSQVHT*KRPGDP
Trigger: GGGATCGCCAGGCCTTTTCCATGTATGAACCTGGCT...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGATTCCAGCCCCAGCAGTaGGTCCCCACTTTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGFQPQQ*VPTLRV
Trigger: AACACGCAAAGTGGGGACCCACTGCTGGGGCTGGAA...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGTTCCAGCCCCAGCAGTaGGTCCCCACTTTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWFQPQQ*VPTLRV
Trigger: AACACGCAAAGTGGGGACCCACTGCTGGGGCTGGAA...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTCTTTCCAGCTCTGGGTaGAAGTCTTCCTCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGILSSSG*KSSSLP
Trigger: GGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAG...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCATGCTTGAACTCCTaGGCTGCCCGCAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMSCLNS*AARNSS
Trigger: GGAACTGTTGCGGGCAGCCCAGGAGTTCAAGCATGA...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTGTGGGGATTAATGTCTaGAGTGGCCCAGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPVGINV*SGPAPM
Trigger: CATAGGAGCTGGGCCACTCCAGACATTAATCCCCAC...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGAGGTGCATGGAATGTaGGGGACAGAAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSEVHGM*GTEAPA
Trigger: GGCAGGAGCTTCTGTCCCCCACATTCCATGCACCTC...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGATCAGGGAGGCAGCTaGCAGGACCAAAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMDQGGS*QDQNWL
Trigger: TAGCCAGTTTTGGTCCTGCCAGCTGCCTCCCTGATC...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225394.8
ENST00000394869.7
CDS-3UTR TCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTTGTGGCGAAGGTGCTTaGCAATGGAGATGTGGCGTC +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSCGEGA*QWRCGV
Trigger: GACGCCACATCTCCATTGTCAAGCACCTTCGCCACA...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTCACTGGATCACCTGCTaGGTCAGCAGCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSHWITC*VSSWKS
Trigger: GGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTG...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTCTTGTGATCCGGCTTaGGTCCACAGAGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVSCDPA*VHRGRR
Trigger: CCTTCTACCTCTGTGGACGCAAGCCGGATCACAAGA...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCGGTTGCTGAGCGCCTaGAGCTTCTTCTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVRLLSA*SFFLAA
Trigger: AGCTGCTAAGAAGAAGCTGCAGGCGCTCAGCAACCG...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCATTGACCTTCATGAGCTaGTGCACCTTTGCCTCCGAT +
Preference number: 4 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPLTFMS*CTFASD
Trigger: ATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAA...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCTTGAACTCCTGGGCTaGCCGCAACAGTTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPALELLG*PQQFLN
Trigger: ATTCAGGAACTGTTGCGGGCAGCCCAGGAGTTCAAG...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTACTTGAACTCCTGGGCTaGCCGCAACAGTTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLLELLG*PQQFLN
Trigger: ATTCAGGAACTGTTGCGGGCAGCCCAGGAGTTCAAG...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTTTGACAATGGAGATGTaGCGTCCCAGGCTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSLTMEM*RPRLRC
Trigger: GCACCGGAGCCTGGGACGCCACATCTCCATTGTCAA...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTTCTGACTTGATGGGGTaGACTTTGTCTTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGISDLMG*TLSWGL
Trigger: CAACCCCCAAGACAAAGTCCACCCCATCAAGTCAGA...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGAGAGTGCTGTGGTTTTaGGTAGCCAGCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMRVLWF*VASHTA
Trigger: TGCAGTGTGGCTGGCTACCCAAAACCACAGCACTCT...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGATACATGGAAAAGGCCTaGCGATCCCTGCGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGYMEKA*RSLRCV
Trigger: CACACACCGCAGGGATCGCCAGGCCTTTTCCATGTA...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGTCTAGCTCAGTGCTGTaGAAAGGCTGCAGCCGCGTA +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWSSSVL*KGCSRV
Trigger: TACGCGGCTGCAGCCTTTCCACAGCACTGAGCTAGA...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGCGTGCACTGAATAGATaGCGTCGTCCTCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMRALNR*RRPLAQ
Trigger: CTGAGCTAGAGGACGACGCCATCTATTCAGTGCACG...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTCAGGCTTTCCAGCTCTaGGTGGAAGTCTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPQAFQL*VEVFLF
Trigger: AAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTG...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGTGAGGCTGGACCTTaGACTTTAAGCCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGISEAGP*TLSHQL
Trigger: AAGCTGGTGGCTTAAAGTCCAAGGTCCAGCCTCACT...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR TCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGCCCTGATGAACTCTaGCTTGATGGGGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSGPDEL*LDGVDF
Trigger: AAAGTCCACCCCATCAAGTCAGAGTTCATCAGGGCC...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGGCCCTGATGAACTCTaGCTTGATGGGGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGGPDEL*LDGVDF
Trigger: AAAGTCCACCCCATCAAGTCAGAGTTCATCAGGGCC...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTCAGCCATCTGTGGGATaGTGTAATGCCCATTCTTGT +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPQPSVG*CNAHSC
Trigger: ACAAGAATGGGCATTACATCATCCCACAGATGGCTG...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGCTCTGTCTTCAAGATaGCATCCTCTGTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VAALRALVPVALLGWGLMALSSR*HPLCWE
Trigger: TTCCCAGCACAGAGGATGTCATCTTGAAGACAGAGC...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGCAAATGGATCTTCTCTaGGCAGGGCACGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWQMDLL*AGHEAV
Trigger: GACAGCTTCGTGCCCTGCTCAGAGAAGATCCATTTG...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTTCTTGTGATCCGGCTTaGGTCCACAGAGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSSCDPA*VHRGRR
Trigger: CCTTCTACCTCTGTGGACGCAAGCCGGATCACAAGA...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTTGACCTTCATGAGCTaGTGCACCTTTGCCTCCGAT +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVLTFMS*CTFASD
Trigger: ATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAA...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTGGAAGTCTTCCTCTTTaGCCAGCTCTAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPGSLPL*PALETS
Trigger: AGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCC...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTCAAGGCTCTGAGACATaGACTTTTGCCGAGATCTGT +
Preference number: 4 (lower is better)
Translates to: CASGSVGVGINVWSGPAPQGSET*TFAEIC
Trigger: ACAGATCTCGGCAAAAGTGCATGTCTCAGAGCCTTG...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394869.7
ENST00000581348.5
CDS-3UTR CCA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTACAAATGCCAGCATCTaGTACTTGGCCCTGATGAAC +
Preference number: 4 (lower is better)
Translates to: ECGSTKGTCASGSVGVGITNASI*YLALMN
Trigger: GTTCATCAGGGCCAAGTACCAGATGCTGGCATTTGT...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGACAAATGCCAGCATCTaGTACTTGGCCCTGATGAAC +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQTNASI*YLALMN
Trigger: GTTCATCAGGGCCAAGTACCAGATGCTGGCATTTGT...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGGCTGTCAGCCATCTGTaGGATGATGTAATGCCCATT +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQAVSHL*DDVMPI
Trigger: AATGGGCATTACATCATCCCACAGATGGCTGACAGC...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225394.8
ENST00000579937.5
CDS-3UTR CCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCGTCATACACGTCCATaGCGAGTTCCTCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPARHTRP*RVPQKA
Trigger: GGCTTTTTGAGGAACTCGCCATGGACGTGTATGACG...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTAGAGTGCTGTGGTTTTaGGTAGCCAGCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSRVLWF*VASHTA
Trigger: TGCAGTGTGGCTGGCTACCCAAAACCACAGCACTCT...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAAGAGTGCTGTGGTTTTaGGTAGCCAGCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGRVLWF*VASHTA
Trigger: TGCAGTGTGGCTGGCTACCCAAAACCACAGCACTCT...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTAGCCAGGTTCATACATaGAAAAGGCCTGGCGATCCC +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSSQVHT*KRPGDP
Trigger: GGGATCGCCAGGCCTTTTCCATGTATGAACCTGGCT...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCGTGCACTGAATAGATaGCGTCGTCCTCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVRALNR*RRPLAQ
Trigger: CTGAGCTAGAGGACGACGCCATCTATTCAGTGCACG...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGTCGGTCACAGCCAAATaGATCTTCTCTGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVSVTAK*IFSEQG
Trigger: GCCCTGCTCAGAGAAGATCCATTTGGCTGTGACCGA...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGATCGGTCACAGCCAAATaGATCTTCTCTGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGSVTAK*IFSEQG
Trigger: GCCCTGCTCAGAGAAGATCCATTTGGCTGTGACCGA...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGTCGGTCACAGCCAAATaGATCTTCTCTGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWSVTAK*IFSEQG
Trigger: GCCCTGCTCAGAGAAGATCCATTTGGCTGTGACCGA...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGTGGCTCTGTTGGGGTaGGGATTAATGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVVALLG*GLMSGV
Trigger: CACTCCAGACATTAATCCCCACCCCAACAGAGCCAC...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCTCTGTTGGGGTaGGGATTAATGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGVALLG*GLMSGV
Trigger: CACTCCAGACATTAATCCCCACCCCAACAGAGCCAC...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTGGGCAGGGACATCCATaGAGACTATGTACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPAGQGHP*RLCTKE
Trigger: CTCCTTTGTACATAGTCTCCATGGATGTCCCTGCCC...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGATCAGGGAGGCAGCTaGCAGGACCAAAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSDQGGS*QDQNWL
Trigger: TAGCCAGTTTTGGTCCTGCCAGCTGCCTCCCTGATC...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225394.8
ENST00000394869.7
CDS-3UTR TCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTACAGCCATCTGTGGGATaGTGTAATGCCCATTCTTGT +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLQPSVG*CNAHSC
Trigger: ACAAGAATGGGCATTACATCATCCCACAGATGGCTG...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCCAGCCATCTGTGGGATaGTGTAATGCCCATTCTTGT +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVQPSVG*CNAHSC
Trigger: ACAAGAATGGGCATTACATCATCCCACAGATGGCTG...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGCTCTGTCTTCAAGATaGCATCCTCTGTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: CGSTKGTCASGSVGVGINALSSR*HPLCWE
Trigger: TTCCCAGCACAGAGGATGTCATCTTGAAGACAGAGC...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTCAAATGGATCTTCTCTaGGCAGGGCACGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSQMDLL*AGHEAV
Trigger: GACAGCTTCGTGCCCTGCTCAGAGAAGATCCATTTG...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCGATAAGTCAAGGCTCTaGGACATGCACTTTTGCCGA +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVDKSRL*DMHFCR
Trigger: TCGGCAAAAGTGCATGTCTCAGAGCCTTGACTTATC...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394869.7
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTGGTAGCCAGCCACACTaGATCATTTTCTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: TCASGSVGVGINVWSGPAGSQPH*IIFSSI
Trigger: GATCGAAGAGAAAATGATGCAGTGTGGCTGGCTACC...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGTTGACCTTCATGAGCTaGTGCACCTTTGCCTCCGAT +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWLTFMS*CTFASD
Trigger: ATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAA...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGGAAGTCTTCCTCTTTaGCCAGCTCTAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: SVAALRALVPVALLGWGLGSLPL*PALETS
Trigger: AGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCC...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCCAAGGCTCTGAGACATaGACTTTTGCCGAGATCTGT +
Preference number: 4 (lower is better)
Translates to: GSTKGTCASGSVGVGINVQGSET*TFAEIC
Trigger: ACAGATCTCGGCAAAAGTGCATGTCTCAGAGCCTTG...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394869.7
ENST00000581348.5
CDS-3UTR CCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCGTCATACACGTCCATaGCGAGTTCCTCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVRHTRP*RVPQKA
Trigger: GGCTTTTTGAGGAACTCGCCATGGACGTGTATGACG...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTCGTGCACTGAATAGATaGCGTCGTCCTCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSRALNR*RRPLAQ
Trigger: CTGAGCTAGAGGACGACGCCATCTATTCAGTGCACG...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTCAGGCTTTCCAGCTCTaGGTGGAAGTCTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSQAFQL*VEVFLF
Trigger: AAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTG...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCAGGCTTTCCAGCTCTaGGTGGAAGTCTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVQAFQL*VEVFLF
Trigger: AAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTG...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGGCAGGGACATCCATaGAGACTATGTACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSGQGHP*RLCTKE
Trigger: CTCCTTTGTACATAGTCTCCATGGATGTCCCTGCCC...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000581348.5
CDS-3UTR CCA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGTCTGTCAGCCATCTGTaGGATGATGTAATGCCCATT +
Preference number: 4 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQSVSHL*DDVMPI
Trigger: AATGGGCATTACATCATCCCACAGATGGCTGACAGA...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394869.7
ENST00000581348.5
CDS-3UTR TCA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCAGCCATCTGTGGGATaGTGTAATGCCCATTCTTGT +
Preference number: 4 (lower is better)
Translates to: LRALVPVALLGWGLMSGVQPSVG*CNAHSC
Trigger: ACAAGAATGGGCATTACATCATCCCACAGATGGCTG...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCTCTGTCTTCAAGATaGCATCCTCTGTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSALSSR*HPLCWE
Trigger: TTCCCAGCACAGAGGATGTCATCTTGAAGACAGAGC...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAAAGCTTGTGCACAAATaGCAGCATCTGGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: ALRALVPVALLGWGLMSGKLVHK*QHLVLG
Trigger: GCCAAGTACCAGATGCTGGCATTTGTGCACAAGCTT...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAAGCTTGTGCACAAATaGCAGCATCTGGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: STKGTCASGSVGVGINVWKLVHK*QHLVLG
Trigger: GCCAAGTACCAGATGCTGGCATTTGTGCACAAGCTT...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTAAGCTTGTGCACAAATaGCAGCATCTGGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSKLVHK*QHLVLG
Trigger: GCCAAGTACCAGATGCTGGCATTTGTGCACAAGCTT...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGTAGCCAGCCACACTaGATCATTTTCTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSGSQPH*IIFSSI
Trigger: GATCGAAGAGAAAATGATGCAGTGTGGCTGGCTACC...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTTTGACCTTCATGAGCTaGTGCACCTTTGCCTCCGAT +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSLTFMS*CTFASD
Trigger: ATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAA...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGCTGTCAGCCATCTGTaGGATGATGTAATGCCCATT +
Preference number: 4 (lower is better)
Translates to: AALRALVPVALLGWGLMSAVSHL*DDVMPI
Trigger: AATGGGCATTACATCATCCCACAGATGGCTGACAGC...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225394.8
ENST00000579937.5
CDS-3UTR CCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTCAGGCTTTCCAGCTCTaGGTGGAAGTCTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSQAFQL*VEVFLF
Trigger: AAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTG...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR TCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGATAAGTCAAGGCTCTaGGACATGCACTTTTGCCGA +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSDKSRL*DMHFCR
Trigger: TCGGCAAAAGTGCATGTCTCAGAGCCTTGACTTATC...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394869.7
ENST00000581348.5
CDS-3UTR GCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGTAGCCAGCCACACTaGATCATTTTCTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSGSQPH*IIFSSI
Trigger: GATCGAAGAGAAAATGATGCAGTGTGGCTGGCTACC...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CCA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTTCTGTCAGCCATCTGTaGGATGATGTAATGCCCATT +
Preference number: 4 (lower is better)
Translates to: TKGTCASGSVGVGINVWSSVSHL*DDVMPI
Trigger: AATGGGCATTACATCATCCCACAGATGGCTGACAGA...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394869.7
ENST00000581348.5
CDS GCA 90 bp CCGAGGAGTCCATGCTCCGGGCCCGGTTGCTCCGAGTGGCGCCGGTaGTGCGCAGGGGCTCCTGGTCTGTGTCCTCGTCAGAGGCCACGC +
Preference number: 5 (lower is better)
Translates to: PRSPCSGPGCSEWRR*CAGAPGLCPRQRPR
Trigger: GCGTGGCCTCTGACGAGGACACAGACCAGGAGCCCCTGCGCAGCACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCATGGACTCCTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS GCA 90 bp AGGAGTCCATGCTCCGGGCCCGGTTGCTCCGAGTGGCGCCGGTGCTaGGCAGGGGCTCCTGGTCTGTGTCCTCGTCAGAGGCCACGCTGT +
Preference number: 5 (lower is better)
Translates to: RSPCSGPGCSEWRRC*AGAPGLCPRQRPRC
Trigger: ACAGCGTGGCCTCTGACGAGGACACAGACCAGGAGCCCCTGCGCAGCACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCATGGACTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS GCA 90 bp GCCCGTTCACTGGGGAGTGGAGGTGTGGGCACCGGCCCTGGAGGCTaGCGGAGCTGCAGGTTCTCCGCCTGCAGCTTGTGGATCTCTCGC +
Preference number: 5 (lower is better)
Translates to: ARSLGSGGVGTGPGG*RSCRFSACSLWISR
Trigger: GCGAGAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCCAGGGCCGGTGCCCACACCTCCACTCCCCAGTGAACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGCCGGCCGCTCTGCACTaGTGCGGGGTCCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: WGHCLPALTLQPVGAGVEPAALH*CGVQQG
Trigger: TCCCTGCTGGACCCCGCACAAGTGCAGAGCGGCCGG...CTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS GCA 90 bp GCCCGTTCACTGGGGAGTGGAGGTGTGGGCACCGGCCCTGGAGGCTaGCGGAGCTGCAGGTTCTCCGCCTGCAGCTTGTGGATCTATGGG +
Preference number: 5 (lower is better)
Translates to: ARSLGSGGVGTGPGG*RSCRFSACSLWIYG
Trigger: CCCATAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCCAGGGCCGGTGCCCACACCTCCACTCCCCAGTGAACGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS-3UTR CAA 90 bp GGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGGGCTGCTCAGGCTCTaGCCCTGCTGTCTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: GSPLGRRALGALSSGTHSGLLRL*PCCLRL
Trigger: CAAGCGGAGACAGCAGGGCAAGAGCCTGAGCAGCCC...AGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CAA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCATGCTCCGGGCCCGGTaGCTCCGAGTGGCGCCGGTG +
Preference number: 5 (lower is better)
Translates to: IGALDHLLSQQLEVHWGAMLRAR*LRVAPV
Trigger: CACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCAT...GGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS GCA 90 bp GCTTTACGCCGGCCGCTCTGCACTTGTGCGGGGTCCAGCAGGGAGTaGTCCCAGATGGAGTTGGCCCCGTTGCTGGCAAGCGTGTGCACC +
Preference number: 5 (lower is better)
Translates to: ALRRPLCTCAGSSRE*SQMELAPLLASVCT
Trigger: GGTGCACACGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCCTGCTGGACCCCGCACAAGTGCAGAGCGGCCGGCGTAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS CCA 90 bp AAAAGGCCTGGCGATCCCTGCGGTGTGTGCTCCCGCCTGGCGCCATaGGTGTGTGTTCCGCCCGTTCACTGGGGAGTGGAGGTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: KRPGDPCGVCSRLAP*VCVPPVHWGVEVWA
Trigger: TGCCCACACCTCCACTCCCCAGTGAACGGGCGGAACACACACCCATGGCGCCAGGCGGGAGCACACACCGCAGGGATCGCCAGGCCTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTACTTTGTCTTGGGGGTaGGCTTTACGCCGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: AAGSPLGRRALGALSSGTTLSWG*ALRRPL
Trigger: GAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAGT...AGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CAA 90 bp TGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAAGTGTCTGTCCTGCCTaGGCAGCCACGTGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: WGAGLWGHCLPALTLQPVSVCPA*AATCRG
Trigger: ACCTCTGCACGTGGCTGCCAAGGCAGGACAGACACT...TACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CAA 90 bp AGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACAGAGACAGCTCGAGGTaGTCTGTGGGGCTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SSWKSTGAPGSGGTVFRHRDSSR*SVGLLR
Trigger: CCTGAGCAGCCCCACAGACAACCTCGAGCTGTCTCT...GTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS GCA 90 bp GTGGGCACCGGCCCTGGAGGCTGCCGGAGCTGCAGGTTCTCCGCCTaGAGCTTGTGGATCTATGGGTGCAAAGTGCTGTCAACCCCCTGG +
Preference number: 5 (lower is better)
Translates to: VGTGPGGCRSCRFSA*SLWIYGCKVLSTPW
Trigger: CCAGGGGGTTGACAGCACTTTGCACCCATAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCCAGGGCCGGTGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS GCA 90 bp CTGGGGAGTGGAGGTGTGGGCACCGGCCCTGGAGGCTGCCGGAGCTaGAGGTTCTCCGCCTGCAGCTTGTGGATCTATGGGTGCAAAGTG +
Preference number: 5 (lower is better)
Translates to: LGSGGVGTGPGGCRS*RFSACSLWIYGCKV
Trigger: CACTTTGCACCCATAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCCAGGGCCGGTGCCCACACCTCCACTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS CCA 90 bp GGCCGCTCTGCACTTGTGCGGGGTCCAGCAGGGAGTGCTCCCAGATaGAGTTGGCCCCGTTGCTGGCAAGCGTGTGCACCATCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: GRSALVRGPAGSAPR*SWPRCWQACAPSAA
Trigger: TGCTGCAGATGGTGCACACGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCCTGCTGGACCCCGCACAAGTGCAGAGCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS CCA 90 bp CTGTCCTGCCTTGGCAGCCACGTGCAGAGGTGTGGTGCCCTTCTCTaGGTGGAAGAAGTTGGCCTGGGCACCCAGGGAGAGCAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: LSCLGSHVQRCGALL*VEEVGLGTQGEQAQ
Trigger: CTGCGCCTGCTCTCCCTGGGTGCCCAGGCCAACTTCTTCCACCCAGAGAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGCAGGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
CDS CCA 90 bp CGGCCTGCAGTGTCTGTCCTGCCTTGGCAGCCACGTGCAGAGGTGTaGTGCCCTTCTCTGGGTGGAAGAAGTTGGCCTGGGCACCCAGGG +
Preference number: 5 (lower is better)
Translates to: RPAVSVLPWQPRAEV*CPSLGGRSWPGHPG
Trigger: CCCTGGGTGCCCAGGCCAACTTCTTCCACCCAGAGAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGCAGGACAGACACTGCAGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGATGCTCCGGGCCCGGTaGCTCCGAGTGGCGCCGGTG +
Preference number: 5 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQMLRAR*LRVAPV
Trigger: CACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCAT...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS TCA 90 bp GCCCAGACCCATCTCCACGCACACCCGGCCCAGAAGGGACAAAGCTaGATTCATCTCACCGCGTCCCCCACCCCTCCTCCTCTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: AQTHLHAHPAQKGQS*IHLTASPTPPPLAC
Trigger: GCAAGCCAGAGGAGGAGGGGTGGGGGACGCGGTGAGATGAATTCAGCTTTGTCCCTTCTGGGCCGGGTGTGCGTGGAGATGGGTCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS CCA 90 bp TCTGCACTTGTGCGGGGTCCAGCAGGGAGTGCTCCCAGATGGAGTTaGCCCCGTTGCTGGCAAGCGTGTGCACCATCTGCAGCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: SALVRGPAGSAPRWS*PRCWQACAPSAAAW
Trigger: CCACGCTGCTGCAGATGGTGCACACGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCCTGCTGGACCCCGCACAAGTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS CCA 90 bp CCTGCCTTGGCAGCCACGTGCAGAGGTGTGGTGCCCTTCTCTGGGTaGAAGAAGTTGGCCTGGGCACCCAGGGAGAGCAGGCGCAGACAT +
Preference number: 5 (lower is better)
Translates to: PALAATCRGVVPFSG*KKLAWAPRESRRRH
Trigger: ATGTCTGCGCCTGCTCTCCCTGGGTGCCCAGGCCAACTTCTTCCACCCAGAGAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
CDS CCA 90 bp ATACATGGAAAAGGCCTGGCGATCCCTGCGGTGTGTGCTCCCGCCTaGCGCCATGGGTGTGTGTTCCGCCCGTTCACTGGGGAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: IHGKGLAIPAVCAPA*RHGCVFRPFTGEWR
Trigger: CCTCCACTCCCCAGTGAACGGGCGGAACACACACCCATGGCGCCAGGCGGGAGCACACACCGCAGGGATCGCCAGGCCTTTTCCATGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS CCA 90 bp AGGCTGCCGGAGCTGCAGGTTCTCCGCCTGCAGCTTGTGGATCTATaGGTGCAAAGTGCTGTCAACCCCCTGGAGTCCTGGGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: RLPELQVLRLQLVDL*VQSAVNPLESWGSP
Trigger: GGGGGAGCCCCAGGACTCCAGGGGGTTGACAGCACTTTGCACCCATAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS CCA 90 bp GGCCCTGGAGGCTGCCGGAGCTGCAGGTTCTCCGCCTGCAGCTTGTaGATCTATGGGTGCAAAGTGCTGTCAACCCCCTGGAGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GPGGCRSCRFSACSL*IYGCKVLSTPWSPG
Trigger: CCCAGGACTCCAGGGGGTTGACAGCACTTTGCACCCATAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS-3UTR CAA 90 bp GGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCCTCGAGTGTAGTTGCTaGCTGAGGTCTTTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: GLWGHCLPALTLQPVGAGLECSC*LRSLAV
Trigger: CACCGCCAAAGACCTCAGCAAGCAACTACACTCGAG...GCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS TCA 90 bp CCTGCGGCAGCCCCACCCATCTCCCCACACCTTGAGACCCATAGGTaGCTCACAGTGCTGTGGAAAGGCTGCAGCCGCGTAGTGAGCTCG +
Preference number: 5 (lower is better)
Translates to: PAAAPPISPHLETHR*LTVLWKGCSRVVSS
Trigger: CGAGCTCACTACGCGGCTGCAGCCTTTCCACAGCACTGTGAGTCACCTATGGGTCTCAAGGTGTGGGGAGATGGGTGGGGCTGCCGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS GCA 90 bp CCTGCAGTGTCTGTCCTGCCTTGGCAGCCACGTGCAGAGGTGTGGTaGCCTTCTCTGGGTGGAAGAAGTTGGCCTGGGCACCCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: PAVSVLPWQPRAEVW*PSLGGRSWPGHPGR
Trigger: TCTCCCTGGGTGCCCAGGCCAACTTCTTCCACCCAGAGAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGCAGGACAGACACTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
CDS GCA 90 bp GTGGGTCCCCACTTTGCGTGTTCTCATAGTCACTGTCGGCTCCACTaGCGTGGCGGGAAAGCTTGCTCGTGTGGCGGCTTCCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: VGPHFACSHSHCRLH*RGGKACSCGGFPPG
Trigger: CCCAGGAGGGAAGCCGCCACACGAGCAAGCTTTCCCGCCACGGCAGTGGAGCCGACAGTGACTATGAGAACACGCAAAGTGGGGACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000578266.1
ENST00000579937.5
CDS GCA 90 bp TGGGAATTGGGAGGAGAGGAGAGACCTGAGAGGTGGCCAGGCCCATaGCAGCAACCTCCCCAACATGCAGGGATCCCGGGGAGATGGCAC +
Preference number: 5 (lower is better)
Translates to: WELGGEERPERWPGP*QQPPQHAGIPGRWH
Trigger: GTGCCATCTCCCCGGGATCCCTGCATGTTGGGGAGGTTGCTGGCATGGGCCTGGCCACCTCTCAGGTCTCTCCTCTCCTCCCAATTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS GCA 90 bp GTGGGTCCCCACTTTGCGTGTTCTCATAGTCACTGTCGGCTCCACTaGCGTGGCGGGAAAGCTTGCTCGTGTGGCGGCTTCCCTCCCGGT +
Preference number: 5 (lower is better)
Translates to: VGPHFACSHSHCRLH*RGGKACSCGGFPPG
Trigger: ACCGGGAGGGAAGCCGCCACACGAGCAAGCTTTCCCGCCACGGCAGTGGAGCCGACAGTGACTATGAGAACACGCAAAGTGGGGACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581348.5
CDS CCA 90 bp CAGCCACGTGCAGAGGTGTGGTGCCCTTCTCTGGGTGGAAGAAGTTaGCCTGGGCACCCAGGGAGAGCAGGCGCAGACATGTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: QPRAEVWCPSLGGRS*PGHPGRAGADMSPG
Trigger: ACCTGGAGACATGTCTGCGCCTGCTCTCCCTGGGTGCCCAGGCCAACTTCTTCCACCCAGAGAAGGGCACCACACCTCTGCACGTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGCCGGCCGCTCTGCACTaGTGCGGGGTCCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: VAALRALVPVALLGWGLMPAALH*CGVQQG
Trigger: TCCCTGCTGGACCCCGCACAAGTGCAGAGCGGCCGG...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTCCCGGCAGGGAAGCTaGTGCACAAATGCCAGCATC +
Preference number: 5 (lower is better)
Translates to: ALDHLLSQQLEVHWGAGLSRQGS*CTNASI
Trigger: GATGCTGGCATTTGTGCACAAGCTTCCCTGCCGGGA...GAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CAA 90 bp TGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGCAGAGTGCTGTGGTTTaGGGTAGCCAGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: WGHCLPALTLQPVGAGVEQSAVV*GSQPHC
Trigger: GCAGTGTGGCTGGCTACCCAAAACCACAGCACTCTG...CTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CAA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATATGCTCCGGGCCCGGTaGCTCCGAGTGGCGCCGGTG +
Preference number: 5 (lower is better)
Translates to: CGSTKGTCASGSVGVGINMLRAR*LRVAPV
Trigger: CACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCAT...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTATGCTCCGGGCCCGGTaGCTCCGAGTGGCGCCGGTG +
Preference number: 5 (lower is better)
Translates to: AALRALVPVALLGWGLMSMLRAR*LRVAPV
Trigger: CACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCAT...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GAAGTCCACTGGGGCGCCGGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGTCGCTCAGGCTACTGTaGACCTTCATGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: EVHWGAGLWGHCLPALTLSLRLL*TFMSCC
Trigger: GCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGCGA...CAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CAA 90 bp GGGCTCTGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCCAGTGGGTCCCCACTTaGCGTGTTCTCATAGTCACT +
Preference number: 5 (lower is better)
Translates to: GLWGHCLPALTLQPVGAGQWVPT*RVLIVT
Trigger: AGTGACTATGAGAACACGCAAAGTGGGGACCCACTG...GCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS GCA 90 bp ACAAGCAGCTCGGCCTGCAGTGTCTGTCCTGCCTTGGCAGCCACGTaGAGAGGTGTGGTGCCCTTCTCTGGGTGGAAGAAGTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: TSSSACSVCPALAAT*RGVVPFSGWKKLAW
Trigger: CCAGGCCAACTTCTTCCACCCAGAGAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGCAGGACAGACACTGCAGGCCGAGCTGCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
CDS GCA 90 bp GTCAGCCCCATACACTACAAGCAGCTCGGCCTGCAGTGTCTGTCCTaGCTTGGCAGCCACGTGCAGAGGTGTGGTGCCCTTCTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: VSPIHYKQLGLQCLS*LGSHVQRCGALLWV
Trigger: CACCCAGAGAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGCAGGACAGACACTGCAGGCCGAGCTGCTTGTAGTGTATGGGGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGATGGAGTTGGCCCCGTaGCTGGCAAGCGTGTGCACC +
Preference number: 5 (lower is better)
Translates to: WLPGSVAALRALVPVALLMELAP*LASVCT
Trigger: GGTGCACACGCTTGCCAGCAACGGGGCCAACTCCAT...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGTGCTCCCAGATGGAGTaGGCCCCGTTGCTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: WLPGSVAALRALVPVALLCSQME*APLLAS
Trigger: GCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGCA...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATCCGGCCGCTCTGCACTaGTGCGGGGTCCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: CGSTKGTCASGSVGVGINPAALH*CGVQQG
Trigger: TCCCTGCTGGACCCCGCACAAGTGCAGAGCGGCCGG...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGACCGGCCGCTCTGCACTaGTGCGGGGTCCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: ALRALVPVALLGWGLMSGPAALH*CGVQQG
Trigger: TCCCTGCTGGACCCCGCACAAGTGCAGAGCGGCCGG...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGAGACATGTCTCCAGGTaGCCTGTCCGCACGCTCGAG +
Preference number: 5 (lower is better)
Translates to: AARECGSTKGTCASGSVGRHVSR*PVRTLE
Trigger: CTCGAGCGTGCGGACAGGCAACCTGGAGACATGTCT...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CACCTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTAGACATGTCTCCAGGTaGCCTGTCCGCACGCTCGAG +
Preference number: 5 (lower is better)
Translates to: HLAARECGSTKGTCASGSRHVSR*PVRTLE
Trigger: CTCGAGCGTGCGGACAGGCAACCTGGAGACATGTCT...AGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTGGGCTGCTCAGGCTCTaGCCCTGCTGTCTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: CASGSVGVGINVWSGPAPGLLRL*PCCLRL
Trigger: CAAGCGGAGACAGCAGGGCAAGAGCCTGAGCAGCCC...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTGGGCTGCTCAGGCTCTaGCCCTGCTGTCTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: ECGSTKGTCASGSVGVGIGLLRL*PCCLRL
Trigger: CAAGCGGAGACAGCAGGGCAAGAGCCTGAGCAGCCC...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGACGAAGCTGTCATGCTaGAACTCCTGGGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: AARECGSTKGTCASGSVGTKLSC*NSWAAR
Trigger: GCGGGCAGCCCAGGAGTTCAAGCATGACAGCTTCGT...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS CCA 90 bp CCCCATACACTACAAGCAGCTCGGCCTGCAGTGTCTGTCCTGCCTTaGCAGCCACGTGCAGAGGTGTGGTGCCCTTCTCTGGGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: PHTLQAARPAVSVLP*QPRAEVWCPSLGGR
Trigger: TCTTCCACCCAGAGAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGCAGGACAGACACTGCAGGCCGAGCTGCTTGTAGTGTATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
CDS CCA 90 bp TGTGAGCAGGCTGGACTGGAGACCCAGGGAGCCTCACCCCAGCAGTaGGTCCCCACTTTGCGTGTTCTCATAGTCACTGTCGGCTCCACT +
Preference number: 5 (lower is better)
Translates to: CEQAGLETQGASPQQ*VPTLRVLIVTVGST
Trigger: AGTGGAGCCGACAGTGACTATGAGAACACGCAAAGTGGGGACCCACTGCTGGGGTGAGGCTCCCTGGGTCTCCAGTCCAGCCTGCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS-3UTR CAA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGACTTTGTCTTGGGGGTaGGCTTTACGCCGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: WLPGSVAALRALVPVALLTLSWG*ALRRPL
Trigger: GAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAGT...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGACTTTGTCTaGGGGGTTGGCTTTACGCCG +
Preference number: 5 (lower is better)
Translates to: LAARECGSTKGTCASGSVGVDFV*GVGFTP
Trigger: CGGCGTAAAGCCAACCCCCAAGACAAAGTCCACCCC...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGAGTGTCTGTCCTGCCTaGGCAGCCACGTGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: WLPGSVAALRALVPVALLSVCPA*AATCRG
Trigger: ACCTCTGCACGTGGCTGCCAAGGCAGGACAGACACT...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTCCTCAAAAAGCCGGTaGCTGAGCGCCTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LPGSVAALRALVPVALLGSSKSR*LSACSF
Trigger: GAAGCTGCAGGCGCTCAGCAACCGGCTTTTTGAGGA...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp AGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAGGGCTGCTCAGGCTCTaGCCCTGCTGTCTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: SVAALRALVPVALLGWGLGLLRL*PCCLRL
Trigger: CAAGCGGAGACAGCAGGGCAAGAGCCTGAGCAGCCC...TAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGCTGTCGTAGTCGTGTaGGTCGTCGAGGTCACTCTG +
Preference number: 5 (lower is better)
Translates to: IGALDHLLSQQLEVHWGAAVVVV*VVEVTL
Trigger: CAGAGTGACCTCGACGACCAACACGACTACGACAGC...GGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CAA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGGCTGTCGTAGTCGTGTaGGTCGTCGAGGTCACTCTG +
Preference number: 5 (lower is better)
Translates to: LPGSVAALRALVPVALLGAVVVV*VVEVTL
Trigger: CAGAGTGACCTCGACGACCAACACGACTACGACAGC...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGACGAAGCTGTCATGCTaGAACTCCTGGGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: WLPGSVAALRALVPVALLTKLSC*NSWAAR
Trigger: GCGGGCAGCCCAGGAGTTCAAGCATGACAGCTTCGT...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTCCAGGGCTGGCCTCTTaGGGAAGAGGGAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: CASGSVGVGINVWSGPAPPGLAS*GRGRPS
Trigger: AGATGGCCTCCCTCTTCCCAAAGAGGCCAGCCCTGG...AGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCACCAGGGCTGGCCTCTTaGGGAAGAGGGAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPPGLAS*GRGRPS
Trigger: AGATGGCCTCCCTCTTCCCAAAGAGGCCAGCCCTGG...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGGGGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGTTTAAGCCACCAGCTTaGGGAAGAGGGAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: WGHCLPALTLQPVGAGVEFKPPA*GRGRPS
Trigger: AGATGGCCTCCCTCTTCCCAAAGCTGGTGGCTTAAA...CTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS GCA 90 bp TTTGCCTCCGATGTAGCCAGGGCCTTCTTCAGCTCCAGGTACTCCTaGAGCGTCACAGCCCCGTCAGACAAGTCCGAGGAGTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: FASDVARAFFSSRYS*SVTAPSDKSEESML
Trigger: GAGCATGGACTCCTCGGACTTGTCTGACGGGGCTGTGACGCTGCAGGAGTACCTGGAGCTGAAGAAGGCCCTGGCTACATCGGAGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS GCA 90 bp CTCCGGAGCTCGTCGCTCAGGCTACTGTTGACCTTCATGAGCTGCTaGACCTTTGCCTCCGATGTAGCCAGGGCCTTCTTCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LRSSSLRLLLTFMSC*TFASDVARAFFSSR
Trigger: CCTGGAGCTGAAGAAGGCCCTGGCTACATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGCGACGAGCTCCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS GCA 90 bp AGCCTCCGGAGCTCGTCGCTCAGGCTACTGTTGACCTTCATGAGCTaGTGCACCTTTGCCTCCGATGTAGCCAGGGCCTTCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SLRSSSLRLLLTFMS*CTFASDVARAFFSS
Trigger: GGAGCTGAAGAAGGCCCTGGCTACATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGCGACGAGCTCCGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS-3UTR CAA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAGGGGTGGACTTTGTCTaGGGGGTTGGCTTTACGCCG +
Preference number: 5 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPGVDFV*GVGFTP
Trigger: CGGCGTAAAGCCAACCCCCAAGACAAAGTCCACCCC...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTTTGATGGGGTGGACTTaGTCTTGGGGGTTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: RTGSPAESAAGSPLGRRALMGWT*SWGLAL
Trigger: TAAAGCCAACCCCCAAGACAAAGTCCACCCCATCAA...AGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CAA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGCCAGCATCTGGTACTaGGCCCTGATGAACTCTGAC +
Preference number: 5 (lower is better)
Translates to: IGALDHLLSQQLEVHWGAASIWY*ALMNSD
Trigger: GTCAGAGTTCATCAGGGCCAAGTACCAGATGCTGGC...GGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CAA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTTCCCGGCAGGGAAGCTaGTGCACAAATGCCAGCATC +
Preference number: 5 (lower is better)
Translates to: LAARECGSTKGTCASGSVSRQGS*CTNASI
Trigger: GATGCTGGCATTTGTGCACAAGCTTCCCTGCCGGGA...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGTGCTTGCTGAGGTCTTaGGCGGTGACTCCATCATCG +
Preference number: 5 (lower is better)
Translates to: AARECGSTKGTCASGSVGCLLRS*AVTPSS
Trigger: CGATGATGGAGTCACCGCCAAAGACCTCAGCAAGCA...CCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGAGACATGTCTCCAGGTaGCCTGTCCGCACGCTCGAG +
Preference number: 5 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQRHVSR*PVRTLE
Trigger: CTCGAGCGTGCGGACAGGCAACCTGGAGACATGTCT...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGCAGAGTGCTGTGGTTTaGGGTAGCCAGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: WLPGSVAALRALVPVALLQSAVV*GSQPHC
Trigger: GCAGTGTGGCTGGCTACCCAAAACCACAGCACTCTG...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAAAAGCGGGCCAGCTTTaGTCGCCCCTGATTCCGCGT +
Preference number: 5 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPKAGQL*SPLIPR
Trigger: ACGCGGAATCAGGGGCGACAAAAGCTGGCCCGCTTT...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTCGCTCAGGCTACTGTaGACCTTCATGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LPGSVAALRALVPVALLGSLRLL*TFMSCC
Trigger: GCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGCGA...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GGGCACTGTCTTCCGGCACTCACTCTGCAGCCGGTAGGCGCTGGCGTTGAGCAGTGGAAGTCTTCCTCTTaGCCCAGCTCTAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: GHCLPALTLQPVGAGVEQWKSSS*PSSRNL
Trigger: GAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCA...CTGCTCAACGCCAGCGCCTACCGGCTGCAGAGTGAGTGCCGGAAGACAGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000579937.5
CDS-3UTR CAA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCAACGAAGCTGTCATGCTaGAACTCCTGGGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPTKLSC*NSWAAR
Trigger: GCGGGCAGCCCAGGAGTTCAAGCATGACAGCTTCGT...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCAGGGCTGGCCTCTTaGGGAAGAGGGAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: TCASGSVGVGINVWSGPAPGLAS*GRGRPS
Trigger: AGATGGCCTCCCTCTTCCCAAAGAGGCCAGCCCTGG...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000581348.5
CDS CCA 90 bp CTTTCCGGATCCGGTAAAGGCCAGCAGGGACGTGCACTGAATAGATaGCGTCGTCCTCTAGCTCCTGGGGATGTTAGCACAGCGAGCGTC +
Preference number: 5 (lower is better)
Translates to: LSGSGKGQQGRALNR*RRPLAPGDVSTASV
Trigger: GACGCTCGCTGTGCTAACATCCCCAGGAGCTAGAGGACGACGCCATCTATTCAGTGCACGTCCCTGCTGGCCTTTACCGGATCCGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS-3UTR CAA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAATGGAGTTGGCCCCGTaGCTGGCAAGCGTGTGCACC +
Preference number: 5 (lower is better)
Translates to: ALRALVPVALLGWGLMSGMELAP*LASVCT
Trigger: GGTGCACACGCTTGCCAGCAACGGGGCCAACTCCAT...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATATGGAGTTGGCCCCGTaGCTGGCAAGCGTGTGCACC +
Preference number: 5 (lower is better)
Translates to: CGSTKGTCASGSVGVGINMELAP*LASVCT
Trigger: GGTGCACACGCTTGCCAGCAACGGGGCCAACTCCAT...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGGGGTGGACTTTGTCTaGGGGGTTGGCTTTACGCCG +
Preference number: 5 (lower is better)
Translates to: VAALRALVPVALLGWGLMGVDFV*GVGFTP
Trigger: CGGCGTAAAGCCAACCCCCAAGACAAAGTCCACCCC...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGGGCTCTGATGAACTCTGACTaGATGGGGTGGACTTTGTCT +
Preference number: 5 (lower is better)
Translates to: RTGSPAESAAGSPLGRRALMNSD*MGWTLS
Trigger: AGACAAAGTCCACCCCATCAAGTCAGAGTTCATCAG...AGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CAA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTCTCGAGTGTAGTTGCTaGCTGAGGTCTTTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: LAARECGSTKGTCASGSVLECSC*LRSLAV
Trigger: CACCGCCAAAGACCTCAGCAAGCAACTACACTCGAG...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGAGTGTCTGTCCTGCCTaGGCAGCCACGTGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: VAALRALVPVALLGWGLMSVCPA*AATCRG
Trigger: ACCTCTGCACGTGGCTGCCAAGGCAGGACAGACACT...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTAGTGTCTGTCCTGCCTaGGCAGCCACGTGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: TCASGSVGVGINVWSGPASVCPA*AATCRG
Trigger: ACCTCTGCACGTGGCTGCCAAGGCAGGACAGACACT...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCAAAGCGGGCCAGCTTTaGTCGCCCCTGATTCCGCGT +
Preference number: 5 (lower is better)
Translates to: GSTKGTCASGSVGVGINVKAGQL*SPLIPR
Trigger: ACGCGGAATCAGGGGCGACAAAAGCTGGCCCGCTTT...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCAGAGACAGCTCGAGGTaGTCTGTGGGGCTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GSTKGTCASGSVGVGINVRDSSR*SVGLLR
Trigger: CCTGAGCAGCCCCACAGACAACCTCGAGCTGTCTCT...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTGCTGTCGTAGTCGTGTaGGTCGTCGAGGTCACTCTG +
Preference number: 5 (lower is better)
Translates to: ECGSTKGTCASGSVGVGIAVVVV*VVEVTL
Trigger: CAGAGTGACCTCGACGACCAACACGACTACGACAGC...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCCAGGGCTGGCCTCTTaGGGAAGAGGGAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: LRALVPVALLGWGLMSGVPGLAS*GRGRPS
Trigger: AGATGGCCTCCCTCTTCCCAAAGAGGCCAGCCCTGG...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000581348.5
CDS GCA 90 bp CTCGTCGCTCAGGCTACTGTTGACCTTCATGAGCTGCTGCACCTTTaGCTCCGATGTAGCCAGGGCCTTCTTCAGCTCCAGGTACTCCTG +
Preference number: 5 (lower is better)
Translates to: LVAQATVDLHELLHL*LRCSQGLLQLQVLL
Trigger: CAGGAGTACCTGGAGCTGAAGAAGGCCCTGGCTACATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGCGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS GCA 90 bp GGTCTCCATCCAGGCTTTCCAGCTCTGGGTGGAAGTCTTCCTCTTTaGCCAGCTCTAGAAACCTCTTCCCTTCCAGCCCCAGCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: GLHPGFPALGGSLPL*PALETSSLPAPAVG
Trigger: ACCCACTGCTGGGGCTGGAAGGGAAGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTGGATGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578266.1
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTATGGAGTTGGCCCCGTaGCTGGCAAGCGTGTGCACC +
Preference number: 5 (lower is better)
Translates to: TKGTCASGSVGVGINVWSMELAP*LASVCT
Trigger: GGTGCACACGCTTGCCAGCAACGGGGCCAACTCCAT...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATACTTTGTCTTGGGGGTaGGCTTTACGCCGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: CGSTKGTCASGSVGVGINTLSWG*ALRRPL
Trigger: GAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAGT...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGACTTTGTCTTGGGGGTaGGCTTTACGCCGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: STKGTCASGSVGVGINVWTLSWG*ALRRPL
Trigger: GAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAGT...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCATGCTTGCTGAGGTCTTaGGCGGTGACTCCATCATCG +
Preference number: 5 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPCLLRS*AVTPSS
Trigger: CGATGATGGAGTCACCGCCAAAGACCTCAGCAAGCA...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp ATAGGCGCACTGGATCACCTGCTGAGTCAGCAGCTGGAAGTCCACTGGGGCGCCGTCAGTGAGCTCATATaGGCACTCAACCAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: IGALDHLLSQQLEVHWGAVSELI*ALNQPF
Trigger: GAAAGGCTGGTTGAGTGCCAATATGAGCTCACTGAC...GGCGCCCCAGTGGACTTCCAGCTGCTGACTCAGCAGGTGATCCAGTGCGCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CAA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTTCCTCAAAAAGCCGGTaGCTGAGCGCCTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TCASGSVGVGINVWSGPASSKSR*LSACSF
Trigger: GAAGCTGCAGGCGCTCAGCAACCGGCTTTTTGAGGA...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCCTCAAAAAGCCGGTaGCTGAGCGCCTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: VAALRALVPVALLGWGLMSSKSR*LSACSF
Trigger: GAAGCTGCAGGCGCTCAGCAACCGGCTTTTTGAGGA...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGAAAGCGGGCCAGCTTTaGTCGCCCCTGATTCCGCGT +
Preference number: 5 (lower is better)
Translates to: LRALVPVALLGWGLMSGVKAGQL*SPLIPR
Trigger: ACGCGGAATCAGGGGCGACAAAAGCTGGCCCGCTTT...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGAGACAGCTCGAGGTaGTCTGTGGGGCTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: STKGTCASGSVGVGINVWRDSSR*SVGLLR
Trigger: CCTGAGCAGCCCCACAGACAACCTCGAGCTGTCTCT...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGCTGTCGTAGTCGTGTaGGTCGTCGAGGTCACTCTG +
Preference number: 5 (lower is better)
Translates to: VAALRALVPVALLGWGLMAVVVV*VVEVTL
Trigger: CAGAGTGACCTCGACGACCAACACGACTACGACAGC...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATACGAAGCTGTCATGCTaGAACTCCTGGGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: CGSTKGTCASGSVGVGINTKLSC*NSWAAR
Trigger: GCGGGCAGCCCAGGAGTTCAAGCATGACAGCTTCGT...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS CCA 90 bp GCCACCAGCTTTGGGAAGAGGGAGGCCATCTCGGTCACAGCCAAATaGATCTTCTCTGAGCAGGGCACGAAGCTGTCATGCTTGAACTCC +
Preference number: 5 (lower is better)
Translates to: ATSFGKREAISVTAK*IFSEQGTKLSCLNS
Trigger: GGAGTTCAAGCATGACAGCTTCGTGCCCTGCTCAGAGAAGATCCATTTGGCTGTGACCGAGATGGCCTCCCTCTTCCCAAAGCTGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579937.5
CDS-3UTR CAA 90 bp CTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGCTGATGAACTCTGACTaGATGGGGTGGACTTTGTCT +
Preference number: 5 (lower is better)
Translates to: LPGSVAALRALVPVALLGLMNSD*MGWTLS
Trigger: AGACAAAGTCCACCCCATCAAGTCAGAGTTCATCAG...CCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTGCCAGCATCTGGTACTaGGCCCTGATGAACTCTGAC +
Preference number: 5 (lower is better)
Translates to: TCASGSVGVGINVWSGPAASIWY*ALMNSD
Trigger: GTCAGAGTTCATCAGGGCCAAGTACCAGATGCTGGC...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTTCCCGGCAGGGAAGCTaGTGCACAAATGCCAGCATC +
Preference number: 5 (lower is better)
Translates to: AALRALVPVALLGWGLMSSRQGS*CTNASI
Trigger: GATGCTGGCATTTGTGCACAAGCTTCCCTGCCGGGA...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp ACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTTGCTTGCTGAGGTCTTaGGCGGTGACTCCATCATCG +
Preference number: 5 (lower is better)
Translates to: TCASGSVGVGINVWSGPACLLRS*AVTPSS
Trigger: CGATGATGGAGTCACCGCCAAAGACCTCAGCAAGCA...AGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCCTCGAGTGTAGTTGCTaGCTGAGGTCTTTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: GSTKGTCASGSVGVGINVLECSC*LRSLAV
Trigger: CACCGCCAAAGACCTCAGCAAGCAACTACACTCGAG...GACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGATCCTCAAAAAGCCGGTaGCTGAGCGCCTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: ALRALVPVALLGWGLMSGSSKSR*LSACSF
Trigger: GAAGCTGCAGGCGCTCAGCAACCGGCTTTTTGAGGA...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTAAAGCGGGCCAGCTTTaGTCGCCCCTGATTCCGCGT +
Preference number: 5 (lower is better)
Translates to: TKGTCASGSVGVGINVWSKAGQL*SPLIPR
Trigger: ACGCGGAATCAGGGGCGACAAAAGCTGGCCCGCTTT...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTAGAGACAGCTCGAGGTaGTCTGTGGGGCTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: TKGTCASGSVGVGINVWSRDSSR*SVGLLR
Trigger: CCTGAGCAGCCCCACAGACAACCTCGAGCTGTCTCT...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCGCTCAGGCTACTGTaGACCTTCATGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VAALRALVPVALLGWGLMSLRLL*TFMSCC
Trigger: GCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGCGA...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTCCTATGGCCACAGTGGGTCCCCACTTaGCGTGTTCTCATAGTCACT +
Preference number: 5 (lower is better)
Translates to: VALLGWGLMSGVAQLLWPQWVPT*RVLIVT
Trigger: AGTGACTATGAGAACACGCAAAGTGGGGACCCACTG...TGGCCATAGGAGCTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCAGTGGGTCCCCACTTaGCGTGTTCTCATAGTCACT +
Preference number: 5 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQQWVPT*RVLIVT
Trigger: AGTGACTATGAGAACACGCAAAGTGGGGACCCACTG...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGTGGAAGTCTTCCTCTTaGCCCAGCTCTAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: WLPGSVAALRALVPVALLWKSSS*PSSRNL
Trigger: GAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCA...CAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTTGGAAGTCTTCCTCTTaGCCCAGCTCTAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: LAARECGSTKGTCASGSVWKSSS*PSSRNL
Trigger: GAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCA...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS TCA 90 bp GAAAGGGGCATCAGGTGGGCACTCACCTGTCAGCCATCTGTGGGATaGTGTAATGCCCATTCTTGTGATCCGGCTTGCGTCCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: ERGIRWALTCQPSVG*CNAHSCDPACVHRG
Trigger: ACCTCTGTGGACGCAAGCCGGATCACAAGAATGGGCATTACATCATCCCACAGATGGCTGACAGGTGAGTGCCCACCTGATGCCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579536.1
CDS CCA 90 bp GGAAGCCCAGGATCTAGGTCTCCATCCAGGCTTTCCAGCTCTGGGTaGAAGTCTTCCTCTTTGCCCAGCTCTAGAAACCTCTTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: GSPGSRSPSRLSSSG*KSSSLPSSRNLFPS
Trigger: GGAAGGGAAGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTGGATGGAGACCTAGATCCTGGGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000578266.1
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS CCA 90 bp CTCTGGAAAGGGGCATCAGGTGGGCACTCACCTGTCAGCCATCTGTaGGATGATGTAATGCCCATTCTTGTGATCCGGCTTGCGTCCACA +
Preference number: 5 (lower is better)
Translates to: LWKGASGGHSPVSHL*DDVMPILVIRLAST
Trigger: TGTGGACGCAAGCCGGATCACAAGAATGGGCATTACATCATCCCACAGATGGCTGACAGGTGAGTGCCCACCTGATGCCCCTTTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579536.1
CDS CCA 90 bp CCCTGTACCTTTGGGAAGAGGGAGGCCATCTCGGTCACAGCCAAATaGATCTTCTCTGAGCAGGGCACGAAGCTGTCATGCTTGAACTCC +
Preference number: 5 (lower is better)
Translates to: PCTFGKREAISVTAK*IFSEQGTKLSCLNS
Trigger: GGAGTTCAAGCATGACAGCTTCGTGCCCTGCTCAGAGAAGATCCATTTGGCTGTGACCGAGATGGCCTCCCTCTTCCCAAAGGTACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578266.1
CDS-3UTR CAA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTTTGATGGGGTGGACTTaGTCTTGGGGGTTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: ECGSTKGTCASGSVGVGILMGWT*SWGLAL
Trigger: TAAAGCCAACCCCCAAGACAAAGTCCACCCCATCAA...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CTGGCTGCCAGGGAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTCTGATGAACTCTGACTaGATGGGGTGGACTTTGTCT +
Preference number: 5 (lower is better)
Translates to: LAARECGSTKGTCASGSVLMNSD*MGWTLS
Trigger: AGACAAAGTCCACCCCATCAAGTCAGAGTTCATCAG...AACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTCCCTGGCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGCCAGCATCTGGTACTaGGCCCTGATGAACTCTGAC +
Preference number: 5 (lower is better)
Translates to: AALRALVPVALLGWGLMSASIWY*ALMNSD
Trigger: GTCAGAGTTCATCAGGGCCAAGTACCAGATGCTGGC...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGGCCAGCATCTGGTACTaGGCCCTGATGAACTCTGAC +
Preference number: 5 (lower is better)
Translates to: STKGTCASGSVGVGINVWASIWY*ALMNSD
Trigger: GTCAGAGTTCATCAGGGCCAAGTACCAGATGCTGGC...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTTCCCGGCAGGGAAGCTaGTGCACAAATGCCAGCATC +
Preference number: 5 (lower is better)
Translates to: TKGTCASGSVGVGINVWSSRQGS*CTNASI
Trigger: GATGCTGGCATTTGTGCACAAGCTTCCCTGCCGGGA...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTTGCTTGCTGAGGTCTTaGGCGGTGACTCCATCATCG +
Preference number: 5 (lower is better)
Translates to: AALRALVPVALLGWGLMSCLLRS*AVTPSS
Trigger: CGATGATGGAGTCACCGCCAAAGACCTCAGCAAGCA...AGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCTCGAGTGTAGTTGCTaGCTGAGGTCTTTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: LRALVPVALLGWGLMSGVLECSC*LRSLAV
Trigger: CACCGCCAAAGACCTCAGCAAGCAACTACACTCGAG...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GAGTGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTGTCAGTGAGCTCATATaGGCACTCAACCAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: ECGSTKGTCASGSVGVGIVSELI*ALNQPF
Trigger: GAAAGGCTGGTTGAGTGCCAATATGAGCTCACTGAC...AATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTCAGAGTGCTGTGGTTTaGGGTAGCCAGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: TKGTCASGSVGVGINVWSQSAVV*GSQPHC
Trigger: GCAGTGTGGCTGGCTACCCAAAACCACAGCACTCTG...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGATCGCTCAGGCTACTGTaGACCTTCATGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ALRALVPVALLGWGLMSGSLRLL*TFMSCC
Trigger: GCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGCGA...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGCCCAGCTGAGACATGCACTTTaGCCGAGATCTGTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: ALVPVALLGWGLMSGVAQLRHAL*PRSVSH
Trigger: ATGGCTGACAGATCTCGGCAAAAGTGCATGTCTCAG...CTGGGCCACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394869.7
ENST00000581348.5
CDS-3UTR CAA 90 bp GTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGGTCAGTGAGCTCATATaGGCACTCAACCAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: VAALRALVPVALLGWGLMVSELI*ALNQPF
Trigger: GAAAGGCTGGTTGAGTGCCAATATGAGCTCACTGAC...CATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGCAGTGGGTCCCCACTTaGCGTGTTCTCATAGTCACT +
Preference number: 5 (lower is better)
Translates to: LRALVPVALLGWGLMSGVQWVPT*RVLIVT
Trigger: AGTGACTATGAGAACACGCAAAGTGGGGACCCACTG...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGATTGATGGGGTGGACTTaGTCTTGGGGGTTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: ALRALVPVALLGWGLMSGLMGWT*SWGLAL
Trigger: TAAAGCCAACCCCCAAGACAAAGTCCACCCCATCAA...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp TGTGGCAGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATTTGATGGGGTGGACTTaGTCTTGGGGGTTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: CGSTKGTCASGSVGVGINLMGWT*SWGLAL
Trigger: TAAAGCCAACCCCCAAGACAAAGTCCACCCCATCAA...ATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCTGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp CTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTGGTCAGTGAGCTCATATaGGCACTCAACCAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: LRALVPVALLGWGLMSGVVSELI*ALNQPF
Trigger: GAAAGGCTGGTTGAGTGCCAATATGAGCTCACTGAC...CACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp GCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGATGGAAGTCTTCCTCTTaGCCCAGCTCTAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: ALRALVPVALLGWGLMSGWKSSS*PSSRNL
Trigger: GAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCA...TCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp AGCACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGTGGAAGTCTTCCTCTTaGCCCAGCTCTAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: STKGTCASGSVGVGINVWWKSSS*PSSRNL
Trigger: GAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCA...CCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS TCA 90 bp ACGAAGCTGTCATGCTTGAACTCCTGGGCTGCCCGCAACAGTTCCTaGATGTTCTTGGTGACCTGCTCTGTCTTCAAGATGACATCCTCT +
Preference number: 5 (lower is better)
Translates to: TKLSCLNSWAARNSS*MFLVTCSVFKMTSS
Trigger: AGAGGATGTCATCTTGAAGACAGAGCAGGTCACCAAGAACATTCAGGAACTGTTGCGGGCAGCCCAGGAGTTCAAGCATGACAGCTTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000578266.1
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS-3UTR CAA 90 bp ACTAAGGGCACTTGTGCCAGTGGCTCTGTTGGGGTGGGGATTAATGTCTGGAGTCTGATGAACTCTGACTaGATGGGGTGGACTTTGTCT +
Preference number: 5 (lower is better)
Translates to: TKGTCASGSVGVGINVWSLMNSD*MGWTLS
Trigger: AGACAAAGTCCACCCCATCAAGTCAGAGTTCATCAG...ACTCCAGACATTAATCCCCACCCCAACAGAGCCACTGGCACAAGTGCCCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
CDS GCA 72 bp CCATGCTCCGGGCCCGGTTGCTCCGAGTGGCGCCGGTaGTGCGCAGGGGCTCCTGGTCTGTGTCCTCGTCAG +
Preference number: 6 (lower is better)
Translates to: PCSGPGCSEWRR*CAGAPGLCPRQ
Trigger: CTGACGAGGACACAGACCAGGAGCCCCTGCGCAGCACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCATGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS CCA 72 bp CCGAGGAGTCCATGCTCCGGGCCCGGTTGCTCCGAGTaGCGCCGGTGCTGCGCAGGGGCTCCTGGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: PRSPCSGPGCSE*RRCCAGAPGLC
Trigger: ACACAGACCAGGAGCCCCTGCGCAGCACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCATGGACTCCTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS CCA 72 bp CGCCATGGGTGTGTGTTCCGCCCGTTCACTGGGGAGTaGAGGTGTGGGCACCGGCCCTGGAGGCTGCCGGAG +
Preference number: 6 (lower is better)
Translates to: RHGCVFRPFTGE*RCGHRPWRLPE
Trigger: CTCCGGCAGCCTCCAGGGCCGGTGCCCACACCTCCACTCCCCAGTGAACGGGCGGAACACACACCCATGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS GCA 72 bp GGCCCTGGAGGCTGCCGGAGCTGCAGGTTCTCCGCCTaGAGCTTGTGGATCTCTCGCTGCAGCCTCCGGAGC +
Preference number: 6 (lower is better)
Translates to: GPGGCRSCRFSA*SLWISRCSLRS
Trigger: GCTCCGGAGGCTGCAGCGAGAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCCAGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS GCA 72 bp GGAGGTGTGGGCACCGGCCCTGGAGGCTGCCGGAGCTaGAGGTTCTCCGCCTGCAGCTTGTGGATCTCTCGC +
Preference number: 6 (lower is better)
Translates to: GGVGTGPGGCRS*RFSACSLWISR
Trigger: GCGAGAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCCAGGGCCGGTGCCCACACCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS CCA 72 bp GGCGATCCCTGCGGTGTGTGCTCCCGCCTGGCGCCATaGGTGTGTGTTCCGCCCGTTCACTGGGGAGTGGAG +
Preference number: 6 (lower is better)
Translates to: GDPCGVCSRLAP*VCVPPVHWGVE
Trigger: CTCCACTCCCCAGTGAACGGGCGGAACACACACCCATGGCGCCAGGCGGGAGCACACACCGCAGGGATCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS GCA 72 bp TCCCCCTCCCACCGAGGCTGCACCCTCACCTCTCGCTaGAGCCTCCGGAGCTCGTCGCTCAGGCTACTGTTG +
Preference number: 6 (lower is better)
Translates to: SPSHRGCTLTSR*SLRSSSLRLLL
Trigger: CAACAGTAGCCTGAGCGACGAGCTCCGGAGGCTGCAGCGAGAGGTGAGGGTGCAGCCTCGGTGGGAGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS GCA 72 bp GGAGGTGTGGGCACCGGCCCTGGAGGCTGCCGGAGCTaGAGGTTCTCCGCCTGCAGCTTGTGGATCTATGGG +
Preference number: 6 (lower is better)
Translates to: GGVGTGPGGCRS*RFSACSLWIYG
Trigger: CCCATAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCCAGGGCCGGTGCCCACACCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS CCA 72 bp AAAGGCCTGGCGATCCCTGCGGTGTGTGCTCCCGCCTaGCGCCATGGGTGTGTGTTCCGCCCGTTCACTGGG +
Preference number: 6 (lower is better)
Translates to: KGLAIPAVCAPA*RHGCVFRPFTG
Trigger: CCCAGTGAACGGGCGGAACACACACCCATGGCGCCAGGCGGGAGCACACACCGCAGGGATCGCCAGGCCTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS CAA 90 bp TGTGCGGGGTCCAGCAGGGAGTGCTCCCAGATGGAGTTGGCCCCGTaGCTGGCAAGCGTGTGCACCATCTGCAGCAGCGTGGGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: CAGSSRECSQMELAP*LASVCTICSSVGGQ
Trigger: CTGGCCTCCCACGCTGCTGCAGATGGTGCACACGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCCTGCTGGACCCCGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS TCA 72 bp GCAGCGTGGGAGGCCAGGCGCTGTGGCGAAGGTGCTTaGCAATGGAGATGTGGCGTCCCAGGCTCCGGTGCA +
Preference number: 6 (lower is better)
Translates to: AAWEARRCGEGA*QWRCGVPGSGA
Trigger: TGCACCGGAGCCTGGGACGCCACATCTCCATTGTCAAGCACCTTCGCCACAGCGCCTGGCCTCCCACGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS GCA 72 bp TGCAGCAGCGTGGGAGGCCAGGCGCTGTGGCGAAGGTaGTTGACAATGGAGATGTGGCGTCCCAGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: CSSVGGQALWRR*LTMEMWRPRLR
Trigger: CCGGAGCCTGGGACGCCACATCTCCATTGTCAAGCACCTTCGCCACAGCGCCTGGCCTCCCACGCTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS GCA 72 bp GGAGGAGAGGAGAGACCTGAGAGGTGGCCAGGCCCATaGCAGCAACCTCCCCAACATGCAGGGATCCCGGGG +
Preference number: 6 (lower is better)
Translates to: GGEERPERWPGP*QQPPQHAGIPG
Trigger: CCCCGGGATCCCTGCATGTTGGGGAGGTTGCTGGCATGGGCCTGGCCACCTCTCAGGTCTCTCCTCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS GCA 72 bp CAGCACACCCCTGCTGATGGATGCCCAGCCAGGGTCTaGCAGGGTGAGGGCAAGGGTCAGCCGGAGCCAGAT +
Preference number: 6 (lower is better)
Translates to: QHTPADGCPARV*QGEGKGQPEPD
Trigger: ATCTGGCTCCGGCTGACCCTTGCCCTCACCCTGGCAGACCCTGGCTGGGCATCCATCAGCAGGGGTGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577466.2
CDS GCA 72 bp AGTCACTGTCGGCTCCACTGCCGTGGCGGGAAAGCTTaGTCGTGTGGCGGCTTCCCTCCCGGTAAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: SHCRLHCRGGKA*SCGGFPPGKGQ
Trigger: CTGGCCTTTACCGGGAGGGAAGCCGCCACACGAGCAAGCTTTCCCGCCACGGCAGTGGAGCCGACAGTGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581348.5
CDS CCA 72 bp GCAGGGAGTGCTCCCAGATGGAGTTGGCCCCGTTGCTaGCAAGCGTGTGCACCATCTGCAGCAGCGTGGGAG +
Preference number: 6 (lower is better)
Translates to: AGSAPRWSWPRC*QACAPSAAAWE
Trigger: CTCCCACGCTGCTGCAGATGGTGCACACGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS CCA 72 bp GTGCGGGGTCCAGCAGGGAGTGCTCCCAGATGGAGTTaGCCCCGTTGCTGGCAAGCGTGTGCACCATCTGCA +
Preference number: 6 (lower is better)
Translates to: VRGPAGSAPRWS*PRCWQACAPSA
Trigger: TGCAGATGGTGCACACGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCCTGCTGGACCCCGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS CAA 72 bp AGAGAAAGACACGTTCCAGCCTCGGAGCCGCCCGCCTaGGTCCTCACACACTGGGGGCCCTCTCAACCTCCC +
Preference number: 6 (lower is better)
Translates to: RERHVPASEPPA*VLTHWGPSQPP
Trigger: GGGAGGTTGAGAGGGCCCCCAGTGTGTGAGGACCAAGGCGGGCGGCTCCGAGGCTGGAACGTGTCTTTCTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS CAA 90 bp CTCTGCACTTGTGCGGGGTCCAGCAGGGAGTGCTCCCAGATGGAGTaGGCCCCGTTGCTGGCAAGCGTGTGCACCATCTGCAGCAGCGTG +
Preference number: 6 (lower is better)
Translates to: LCTCAGSSRECSQME*APLLASVCTICSSV
Trigger: CACGCTGCTGCAGATGGTGCACACGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCCTGCTGGACCCCGCACAAGTGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS CAA 90 bp GTGGACTTTGTCTTGGGGGTTGGCTTTACGCCGGCCGCTCTGCACTaGTGCGGGGTCCAGCAGGGAGTGCTCCCAGATGGAGTTGGCCCC +
Preference number: 6 (lower is better)
Translates to: VDFVLGVGFTPAALH*CGVQQGVLPDGVGP
Trigger: GGGGCCAACTCCATCTGGGAGCACTCCCTGCTGGACCCCGCACAAGTGCAGAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAGTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS CAA 90 bp GGACTGGAGACCCAGGGAGCCTCACCCCAGCAGTGGGTCCCCACTTaGCGTGTTCTCATAGTCACTGTCGGCTCCACTGCCGTGGCGGGA +
Preference number: 6 (lower is better)
Translates to: GLETQGASPQQWVPT*RVLIVTVGSTAVAG
Trigger: TCCCGCCACGGCAGTGGAGCCGACAGTGACTATGAGAACACGCAAAGTGGGGACCCACTGCTGGGGTGAGGCTCCCTGGGTCTCCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS TCA 72 bp GCGGGCCAGCTTTTGTCGCCCCTGATTCCGCGTGGCTaGGTATTCCGGGTTAACAGGCAGGAAGGGCACGGC +
Preference number: 6 (lower is better)
Translates to: AGQLLSPLIPRG*VFRVNRQEGHG
Trigger: GCCGTGCCCTTCCTGCCTGTTAACCCGGAATACTCAGCCACGCGGAATCAGGGGCGACAAAAGCTGGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000579937.5
ENST00000581348.5
ENST00000581925.1
ENST00000585148.1
ENST00000586574.5
CDS GCA 72 bp ACTTTGTCTTGGGGGTTGGCTTTACGCCGGCCGCTCTaGACTTGTGCGGGGTCCAGCAGGGAGTGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: TLSWGLALRRPL*TCAGSSRECSQ
Trigger: CTGGGAGCACTCCCTGCTGGACCCCGCACAAGTGCAGAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS CCA 72 bp GCAGAGGTGTGGTGCCCTTCTCTGGGTGGAAGAAGTTaGCCTGGGCACCCAGGGAGAGCAGGCGCAGACATG +
Preference number: 6 (lower is better)
Translates to: AEVWCPSLGGRS*PGHPGRAGADM
Trigger: CATGTCTGCGCCTGCTCTCCCTGGGTGCCCAGGCCAACTTCTTCCACCCAGAGAAGGGCACCACACCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
CDS CCA 72 bp TTCAGGGCAGAGCCAGGTTCATACATGGAAAAGGCCTaGCGATCCCTGCGGTGTGTGCTCCCGCCTGGCGCC +
Preference number: 6 (lower is better)
Translates to: FRAEPGSYMEKA*RSLRCVLPPGA
Trigger: GGCGCCAGGCGGGAGCACACACCGCAGGGATCGCCAGGCCTTTTCCATGTATGAACCTGGCTCTGCCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS CAA 72 bp TCCAGCAGGGAGTGCTCCCAGATGGAGTTGGCCCCGTaGCTGGCAAGCGTGTGCACCATCTGCAGCAGCGTG +
Preference number: 6 (lower is better)
Translates to: SSRECSQMELAP*LASVCTICSSV
Trigger: CACGCTGCTGCAGATGGTGCACACGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCCTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS CAA 90 bp GATACATATAGAGAAAGACACGTTCCAGCCTCGGAGCCGCCCGCCTaGGTCCTCACACACTGGGGGCCCTCTCAACCTCCCCGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: DTYRERHVPASEPPA*VLTHWGPSQPPRLG
Trigger: GCCGAGGCGGGGAGGTTGAGAGGGCCCCCAGTGTGTGAGGACCAAGGCGGGCGGCTCCGAGGCTGGAACGTGTCTTTCTCTATATGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS CAA 90 bp ACCGGCCCTGGAGGCTGCCGGAGCTGCAGGTTCTCCGCCTGCAGCTaGTGGATCTATGGGTGCAAAGTGCTGTCAACCCCCTGGAGTCCT +
Preference number: 6 (lower is better)
Translates to: TGPGGCRSCRFSACS*WIYGCKVLSTPWSP
Trigger: AGGACTCCAGGGGGTTGACAGCACTTTGCACCCATAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCCAGGGCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS CAA 90 bp GCGTCATGGTGGACCCTGCGGCAGCCCCACCCATCTCCCCACACCTaGAGACCCATAGGTGACTCACAGTGCTGTGGAAAGGCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: ASWWTLRQPHPSPHT*RPIGDSQCCGKAAA
Trigger: GGCTGCAGCCTTTCCACAGCACTGTGAGTCACCTATGGGTCTCAAGGTGTGGGGAGATGGGTGGGGCTGCCGCAGGGTCCACCATGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS GCA 72 bp AAATGCCTCCCCGCCCTACCCCACCTTCAGGCCTGCTaGCCCGGCAGGCACCATATACCTCTGAGACATGCA +
Preference number: 6 (lower is better)
Translates to: KCLPALPHLQAC*PGRHHIPLRHA
Trigger: TGCATGTCTCAGAGGTATATGGTGCCTGCCGGGGCAGCAGGCCTGAAGGTGGGGTAGGGCGGGGAGGCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS GCA 72 bp GGCCCTGGAGGCTGCCGGAGCTGCAGGTTCTCCGCCTaGAGCTTGTGGATCTATGGGTGCAAAGTGCTGTCA +
Preference number: 6 (lower is better)
Translates to: GPGGCRSCRFSA*SLWIYGCKVLS
Trigger: TGACAGCACTTTGCACCCATAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCCAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS CCA 72 bp CTACAAGCAGCTCGGCCTGCAGTGTCTGTCCTGCCTTaGCAGCCACGTGCAGAGGTGTGGTGCCCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: LQAARPAVSVLP*QPRAEVWCPSL
Trigger: CAGAGAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGCAGGACAGACACTGCAGGCCGAGCTGCTTGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
CDS CCA 72 bp GGCTGCCGGAGCTGCAGGTTCTCCGCCTGCAGCTTGTaGATCTATGGGTGCAAAGTGCTGTCAACCCCCTGG +
Preference number: 6 (lower is better)
Translates to: GCRSCRFSACSL*IYGCKVLSTPW
Trigger: CCAGGGGGTTGACAGCACTTTGCACCCATAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS CAA 72 bp GCACCCAGGGAGAGCAGGCGCAGACATGTCTCCAGGTaGCCTGTCCGCACGCTCGAGTGTAGTTGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: APRESRRRHVSR*PVRTLECSCLL
Trigger: CAGCAAGCAACTACACTCGAGCGTGCGGACAGGCAACCTGGAGACATGTCTGCGCCTGCTCTCCCTGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS CAA 72 bp ACCCAGGGAGCCTCACCCCAGCAGTGGGTCCCCACTTaGCGTGTTCTCATAGTCACTGTCGGCTCCACTGCC +
Preference number: 6 (lower is better)
Translates to: TQGASPQQWVPT*RVLIVTVGSTA
Trigger: GGCAGTGGAGCCGACAGTGACTATGAGAACACGCAAAGTGGGGACCCACTGCTGGGGTGAGGCTCCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS CAA 72 bp GGAGGCTGCCGGAGCTGCAGGTTCTCCGCCTGCAGCTaGTGGATCTATGGGTGCAAAGTGCTGTCAACCCCC +
Preference number: 6 (lower is better)
Translates to: GGCRSCRFSACS*WIYGCKVLSTP
Trigger: GGGGGTTGACAGCACTTTGCACCCATAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS CAA 90 bp TTGGCCTGGGCACCCAGGGAGAGCAGGCGCAGACATGTCTCCAGGTaGCCTGTCCGCACGCTCGAGTGTAGTTGCTTGCTGAGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: LAWAPRESRRRHVSR*PVRTLECSCLLRSL
Trigger: CAAAGACCTCAGCAAGCAACTACACTCGAGCGTGCGGACAGGCAACCTGGAGACATGTCTGCGCCTGCTCTCCCTGGGTGCCCAGGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS CAA 90 bp CTCACCTCTCGCTGCAGCCTCCGGAGCTCGTCGCTCAGGCTACTGTaGACCTTCATGAGCTGCTGCACCTTTGCCTCCGATGTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: LTSRCSLRSSSLRLL*TFMSCCTFASDVAR
Trigger: CCTGGCTACATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGCGACGAGCTCCGGAGGCTGCAGCGAGAGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS GCA 72 bp GATGTAGCCAGGGCCTTCTTCAGCTCCAGGTACTCCTaGAGCGTCACAGCCCCGTCAGACAAGTCCGAGGAG +
Preference number: 6 (lower is better)
Translates to: DVARAFFSSRYS*SVTAPSDKSEE
Trigger: CTCCTCGGACTTGTCTGACGGGGCTGTGACGCTGCAGGAGTACCTGGAGCTGAAGAAGGCCCTGGCTACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS CCA 72 bp GCTGGACTGGAGACCCAGGGAGCCTCACCCCAGCAGTaGGTCCCCACTTTGCGTGTTCTCATAGTCACTGTC +
Preference number: 6 (lower is better)
Translates to: AGLETQGASPQQ*VPTLRVLIVTV
Trigger: GACAGTGACTATGAGAACACGCAAAGTGGGGACCCACTGCTGGGGTGAGGCTCCCTGGGTCTCCAGTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS CAA 72 bp CGCTGCAGCCTCCGGAGCTCGTCGCTCAGGCTACTGTaGACCTTCATGAGCTGCTGCACCTTTGCCTCCGAT +
Preference number: 6 (lower is better)
Translates to: RCSLRSSSLRLL*TFMSCCTFASD
Trigger: ATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGCGACGAGCTCCGGAGGCTGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS CAA 90 bp TGGATCTCTCGCTGCAGCCTCCGGAGCTCGTCGCTCAGGCTACTGTaGACCTTCATGAGCTGCTGCACCTTTGCCTCCGATGTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: WISRCSLRSSSLRLL*TFMSCCTFASDVAR
Trigger: CCTGGCTACATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGCGACGAGCTCCGGAGGCTGCAGCGAGAGATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS GCA 72 bp CACTTTGCGTGTTCTCATAGTCACTGTCGGCTCCACTaGCGTGGCGGGAAAGCTTGCTCGTGTGGCGGCTTC +
Preference number: 6 (lower is better)
Translates to: HFACSHSHCRLH*RGGKACSCGGF
Trigger: GAAGCCGCCACACGAGCAAGCTTTCCCGCCACGGCAGTGGAGCCGACAGTGACTATGAGAACACGCAAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000578266.1
ENST00000579937.5
ENST00000581348.5
CDS GCA 72 bp TGCAGGTTCTCCGCCTGCAGCTTGTGGATCTATGGGTaGAAAGTGCTGTCAACCCCCTGGAGTCCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: CRFSACSLWIYG*KVLSTPWSPGA
Trigger: AGCCCCAGGACTCCAGGGGGTTGACAGCACTTTGCACCCATAGATCCACAAGCTGCAGGCGGAGAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS CCA 72 bp GAGCTGCAGGTTCTCCGCCTGCAGCTTGTGGATCTATaGGTGCAAAGTGCTGTCAACCCCCTGGAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: ELQVLRLQLVDL*VQSAVNPLESW
Trigger: CCAGGACTCCAGGGGGTTGACAGCACTTTGCACCCATAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS CAA 72 bp AACTCTGACTTGATGGGGTGGACTTTGTCTTGGGGGTaGGCTTTACGCCGGCCGCTCTGCACTTGTGCGGGG +
Preference number: 6 (lower is better)
Translates to: NSDLMGWTLSWG*ALRRPLCTCAG
Trigger: CCCCGCACAAGTGCAGAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAGTCCACCCCATCAAGTCAGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000577466.2
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS CAA 90 bp AGGTCTCCATCCAGGCTTTCCAGCTCTGGGTGGAAGTCTTCCTCTTaGCCCAGCTCTAGAAACCTCTTCCCTTCCAGCCCCAGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: RSPSRLSSSGWKSSS*PSSRNLFPSSPSSG
Trigger: CCCACTGCTGGGGCTGGAAGGGAAGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTGGATGGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578266.1
ENST00000579937.5
ENST00000581348.5
CDS CAA 90 bp AGGTCTCCATCCAGGCTTTCCAGCTCTGGGTGGAAGTCTTCCTCTTaGCCCAGCTCTAGAAACCTCTTCCCTTCCAGCCTGAGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: RSPSRLSSSGWKSSS*PSSRNLFPSSLRPR
Trigger: CCTGGGCCTCAGGCTGGAAGGGAAGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTGGATGGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS TCA 72 bp GCTTGCGTCCACAGAGGTAGAAGGCCAGCCGGTCAGTaGGCTCATATTGGCACTCAACCAGCCTTTCCGCCA +
Preference number: 6 (lower is better)
Translates to: ACVHRGRRPAGQ*AHIGTQPAFPP
Trigger: TGGCGGAAAGGCTGGTTGAGTGCCAATATGAGCTCACTGACCGGCTGGCCTTCTACCTCTGTGGACGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000579536.1
ENST00000579937.5
ENST00000581348.5
CDS GCA 72 bp AGCTCGTCGCTCAGGCTACTGTTGACCTTCATGAGCTaGTGCACCTTTGCCTCCGATGTAGCCAGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SSSLRLLLTFMS*CTFASDVARAF
Trigger: GAAGGCCCTGGCTACATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGCGACGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS GCA 72 bp CCAGGCTTTCCAGCTCTGGGTGGAAGTCTTCCTCTTTaGCCAGCTCTAGAAACCTCTTCCCTTCCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: PGFPALGGSLPL*PALETSSLPAR
Trigger: CCGGGCTGGAAGGGAAGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578670.5
CDS CCA 72 bp CCCGGTAAAGGCCAGCAGGGACGTGCACTGAATAGATaGCGTCGTCCTCTAGCTCAGTGCTGTGGAAAGGCT +
Preference number: 6 (lower is better)
Translates to: PGKGQQGRALNR*RRPLAQCCGKA
Trigger: AGCCTTTCCACAGCACTGAGCTAGAGGACGACGCCATCTATTCAGTGCACGTCCCTGCTGGCCTTTACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578670.5
ENST00000581348.5
CDS CAA 90 bp GCCTGCTGCCCCGGCAGGCACCATATACCTCTGAGACATGCACTTTaGCCGAGATCTAAGTCCAGAGGAAGGCAGCAGAGGGAAGAACAG +
Preference number: 6 (lower is better)
Translates to: ACCPGRHHIPLRHAL*PRSKSRGRQQREEQ
Trigger: CTGTTCTTCCCTCTGCTGCCTTCCTCTGGACTTAGATCTCGGCAAAAGTGCATGTCTCAGAGGTATATGGTGCCTGCCGGGGCAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS CAA 90 bp AGGTCTCCATCCAGGCTTTCCAGCTCTGGGTGGAAGTCTTCCTCTTaGCCCAGCTCTAGAAACCTCTTCCCTTCCAGCCCGGTAAAGGCC +
Preference number: 6 (lower is better)
Translates to: RSPSRLSSSGWKSSS*PSSRNLFPSSPVKA
Trigger: GGCCTTTACCGGGCTGGAAGGGAAGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTGGATGGAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578670.5
CDS TCA 72 bp ACAGGTAGCTTCTCACACCCAAGCCCTCCATGTACTTaGCAGTCACGGGGCTCAGGCTATGCGGGCCACATA +
Preference number: 6 (lower is better)
Translates to: TGSFSHPSPPCT*QSRGSGYAGHI
Trigger: TATGTGGCCCGCATAGCCTGAGCCCCGTGACTGTCAAGTACATGGAGGGCTTGGGTGTGAGAAGCTACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579536.1
CDS GCA 72 bp CAGGCTACTGTTGACCTTCATGAGCTGCTGCACCTTTaGCTCCGATGTAGCCAGGGCCTTCTTCAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: QATVDLHELLHL*LRCSQGLLQLQ
Trigger: CTGGAGCTGAAGAAGGCCCTGGCTACATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAACAGTAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000491377.1
ENST00000579937.5
ENST00000581348.5
ENST00000585148.1
CDS GCA 72 bp CCAGGCTTTCCAGCTCTGGGTGGAAGTCTTCCTCTTTaGCCAGCTCTAGAAACCTCTTCCCTTCCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: PGFPALGGSLPL*PALETSSLPAP
Trigger: TGGGGCTGGAAGGGAAGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578266.1
ENST00000579937.5
ENST00000581348.5
CDS CCA 72 bp TCCGGTAAAGGCCAGCAGGGACGTGCACTGAATAGATaGCGTCGTCCTCTAGCTCAGTGCTGTGGAAAGGCT +
Preference number: 6 (lower is better)
Translates to: SGKGQQGRALNR*RRPLAQCCGKA
Trigger: AGCCTTTCCACAGCACTGAGCTAGAGGACGACGCCATCTATTCAGTGCACGTCCCTGCTGGCCTTTACCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000579937.5
CDS CCA 72 bp TCCGGTAAAGGCCAGCAGGGACGTGCACTGAATAGATaGCGTCGTCCTCTAGCTCCTGGGGATGTTAGCACA +
Preference number: 6 (lower is better)
Translates to: SGKGQQGRALNR*RRPLAPGDVST
Trigger: TGTGCTAACATCCCCAGGAGCTAGAGGACGACGCCATCTATTCAGTGCACGTCCCTGCTGGCCTTTACCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491377.1
CDS CAA 72 bp TCCAGGCTTTCCAGCTCTGGGTGGAAGTCTTCCTCTTaGCCCAGCTCTAGAAACCTCTTCCCTTCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: SRLSSSGWKSSS*PSSRNLFPSSP
Trigger: GGGGCTGGAAGGGAAGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000578266.1
ENST00000579937.5
ENST00000581348.5
CDS CAA 72 bp TCCAGGCTTTCCAGCTCTGGGTGGAAGTCTTCCTCTTaGCCCAGCTCTAGAAACCTCTTCCCTTCCAGCCCG +
Preference number: 6 (lower is better)
Translates to: SRLSSSGWKSSS*PSSRNLFPSSP
Trigger: CGGGCTGGAAGGGAAGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578670.5
CDS TCA 72 bp GGAGGCCATCTCGGTCACAGCCAAATGGATCTTCTCTaGGCAGGGCACGAAGCTGTCATGCTTGAACTCCTG +
Preference number: 6 (lower is better)
Translates to: GGHLGHSQMDLL*AGHEAVMLELL
Trigger: CAGGAGTTCAAGCATGACAGCTTCGTGCCCTGCTCAGAGAAGATCCATTTGGCTGTGACCGAGATGGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000578266.1
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS TCA 72 bp TTCAGGCCTGCTGCCCCGGCAGGCACCATATACCTCTaGGACATGCACTTTTGCCGAGATCTAAGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: FRPAAPAGTIYL*DMHFCRDLSPE
Trigger: CTCTGGACTTAGATCTCGGCAAAAGTGCATGTCTCAGAGGTATATGGTGCCTGCCGGGGCAGCAGGCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS CCA 72 bp GGGGCATCAGGTGGGCACTCACCTGTCAGCCATCTGTaGGATGATGTAATGCCCATTCTTGTGATCCGGCTT +
Preference number: 6 (lower is better)
Translates to: GASGGHSPVSHL*DDVMPILVIRL
Trigger: AAGCCGGATCACAAGAATGGGCATTACATCATCCCACAGATGGCTGACAGGTGAGTGCCCACCTGATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579536.1
CDS CAA 72 bp CACGGCACTGCGCTCTGTCACCAGAGTGCTGTGGTTTaGGGTAGCCAGCCACACTGCATCATTTTCTCTTCG +
Preference number: 6 (lower is better)
Translates to: HGTALCHQSAVV*GSQPHCIIFSS
Trigger: CGAAGAGAAAATGATGCAGTGTGGCTGGCTACCCAAAACCACAGCACTCTGGTGACAGAGCGCAGTGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000579937.5
ENST00000581348.5
ENST00000581925.1
ENST00000585148.1
ENST00000586574.5
CDS CAA 72 bp CCCGGCAGGCACCATATACCTCTGAGACATGCACTTTaGCCGAGATCTAAGTCCAGAGGAAGGCAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: PGRHHIPLRHAL*PRSKSRGRQQR
Trigger: CCTCTGCTGCCTTCCTCTGGACTTAGATCTCGGCAAAAGTGCATGTCTCAGAGGTATATGGTGCCTGCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS CAA 72 bp TCCAGGCTTTCCAGCTCTGGGTGGAAGTCTTCCTCTTaGCCCAGCTCTAGAAACCTCTTCCCTTCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: SRLSSSGWKSSS*PSSRNLFPSSL
Trigger: CAGGCTGGAAGGGAAGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS TCA 72 bp ATCAGGTGGGCACTCACCTGTCAGCCATCTGTGGGATaGTGTAATGCCCATTCTTGTGATCCGGCTTGCGTC +
Preference number: 6 (lower is better)
Translates to: IRWALTCQPSVG*CNAHSCDPACV
Trigger: GACGCAAGCCGGATCACAAGAATGGGCATTACATCATCCCACAGATGGCTGACAGGTGAGTGCCCACCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579536.1
CDS CCA 72 bp GGATCTAGGTCTCCATCCAGGCTTTCCAGCTCTGGGTaGAAGTCTTCCTCTTTGCCCAGCTCTAGAAACCTC +
Preference number: 6 (lower is better)
Translates to: GSRSPSRLSSSG*KSSSLPSSRNL
Trigger: GAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTGGATGGAGACCTAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000578266.1
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS TCA 72 bp AAATGCCAGCATCTGGTACTTGGCCCTGATGAACTCTaGCTTGATGGGGTGGACTTTGTCTTGGGGGTTGGC +
Preference number: 6 (lower is better)
Translates to: KCQHLVLGPDEL*LDGVDFVLGVG
Trigger: GCCAACCCCCAAGACAAAGTCCACCCCATCAAGTCAGAGTTCATCAGGGCCAAGTACCAGATGCTGGCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225394.8
ENST00000335356.7
ENST00000394869.7
ENST00000579937.5
ENST00000581348.5
ENST00000583413.4
CDS TCA 72 bp TCATGCTTGAACTCCTGGGCTGCCCGCAACAGTTCCTaGATGTTCTTGGTGACCTGCTCTGTCTTCAAGATG +
Preference number: 6 (lower is better)
Translates to: SCLNSWAARNSS*MFLVTCSVFKM
Trigger: CATCTTGAAGACAGAGCAGGTCACCAAGAACATTCAGGAACTGTTGCGGGCAGCCCAGGAGTTCAAGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225394.8
ENST00000394869.7
ENST00000473217.5
ENST00000578266.1
ENST00000578670.5
ENST00000579937.5
ENST00000581348.5
CDS TCA 72 bp TGCACTTTTGCCGAGATCTGTCAGCCATCTGTGGGATaGTGTAATGCCCATTCTTGTGATCCGGCTTGCGTC +
Preference number: 6 (lower is better)
Translates to: CTFAEICQPSVG*CNAHSCDPACV
Trigger: GACGCAAGCCGGATCACAAGAATGGGCATTACATCATCCCACAGATGGCTGACAGATCTCGGCAAAAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394869.7
ENST00000581348.5
CDS TCA 72 bp ATTCGGATAAGTCAAGGCTGTCAGCCATCTGTGGGATaGTGTAATGCCCATTCTTGTGATCCGGCTTGCGTC +
Preference number: 6 (lower is better)
Translates to: IRISQGCQPSVG*CNAHSCDPACV
Trigger: GACGCAAGCCGGATCACAAGAATGGGCATTACATCATCCCACAGATGGCTGACAGCCTTGACTTATCCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225394.8
ENST00000579937.5
CDS CAA 90 bp CACCCTCCAGTCCTAGTGAAGCTCCCCAGGTTCCTCAATCACCTGTaGCCTGGGCTTTGTAAGTTTCTTAATCTCCCTCCTTCTAGTTTT +
Preference number: 6 (lower is better)
Translates to: HPPVLVKLPRFLNHL*PGLCKFLNLPPSSF
Trigger: AAAACTAGAAGGAGGGAGATTAAGAAACTTACAAAGCCCAGGCAACAGGTGATTGAGGAACCTGGGGAGCTTCACTAGGACTGGAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473217.5
CDS CCA 72 bp AGACATGCACTTTTGCCGAGATCTGTCAGCCATCTGTaGGATGATGTAATGCCCATTCTTGTGATCCGGCTT +
Preference number: 6 (lower is better)
Translates to: RHALLPRSVSHL*DDVMPILVIRL
Trigger: AAGCCGGATCACAAGAATGGGCATTACATCATCCCACAGATGGCTGACAGATCTCGGCAAAAGTGCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394869.7
ENST00000581348.5