RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GIPR (Homo sapiens)

Ensembl gene IDs: ENSG00000010310

Ensembl transcript IDs: ENST00000263281.7, ENST00000304207.12, ENST00000585889.1, ENST00000588816.1, ENST00000590918.6, ENST00000591224.1, ENST00000591322.1, ENST00000652180.1

Found 392 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCCGGAGCCGGAGGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTaGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGGTGC +
Preference number: 1 (lower is better)
Translates to: GPEPEGRARKARSGS*RCSSPRLRRRRQWC
Trigger: GCACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCCTCCGGCTCCGGCCC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR GCA 90 bp GAGCCGGAGGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTaGTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGGTGCCAGCCA +
Preference number: 1 (lower is better)
Translates to: EPEGRARKARSGSWR*SSPRLRRRRQWCQP
Trigger: TGGCTGGCACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCCTCCGGCTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR GCA 90 bp CCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTaGGGCGCAGGCGGCAGTGGTGCCAGCCACGGCGGATCTCCGACT +
Preference number: 1 (lower is better)
Translates to: PGRRAPGAGVAPRPG*GAGGSGASHGGSPT
Trigger: AGTCGGAGATCCGCCGTGGCTGGCACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR GCA 90 bp TTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGACAGTGGGGATATaGGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTGCTCTGGAT +
Preference number: 1 (lower is better)
Translates to: FSQVPGATHLRTVGI*VLTPQPAVALAALD
Trigger: ATCCAGAGCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 90 bp AGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTaGTCTGGATATAAAGTTTCAGCTGCGAGGCCTGCCTTGCCTCAC +
Preference number: 1 (lower is better)
Translates to: SGDMRPHSAASSGPG*SGYKVSAARPALPH
Trigger: GTGAGGCAAGGCAGGCCTCGCAGCTGAAACTTTATATCCAGAGCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 90 bp CTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATaGTATCGCTTCCGCCTAGAATCCTGTTCTCCAGCTCTCCCCAAA +
Preference number: 1 (lower is better)
Translates to: LQPRLSAFLPKGLCL*YRFRLESCSPALPK
Trigger: TTTGGGGAGAGCTGGAGAACAGGATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 90 bp GCCCTGGCTGCTCTGGATATAAAGTTTCAGCTGCGAGGCCTGCCTTaGCTCACCTGTGCTCCGGTCCACACCAAATCACCCTCTCAGGAC +
Preference number: 1 (lower is better)
Translates to: ALAALDIKFQLRGLP*LTCAPVHTKSPSQD
Trigger: GTCCTGAGAGGGTGATTTGGTGTGGACCGGAGCACAGGTGAGGCAAGGCAGGCCTCGCAGCTGAAACTTTATATCCAGAGCAGCCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 90 bp TCACCTGTGCTCCGGTCCACACCAAATCACCCTCTCAGGACCCAGTaGCTCTCACATTACTATCTCCAGCTCGCCCCTCTCCTGAGAGCT +
Preference number: 1 (lower is better)
Translates to: SPVLRSTPNHPLRTQ*LSHYYLQLAPLLRA
Trigger: AGCTCTCAGGAGAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTGGTGTGGACCGGAGCACAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 90 bp GTGGGTGTATGTACAGGTGGTCCAGCCACAATGAGACTGTCAGCATaGCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGAC +
Preference number: 1 (lower is better)
Translates to: VGVCTGGPATMRLSA*PLILPGSRGHPSKD
Trigger: GTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAGTCTCATTGTGGCTGGACCACCTGTACATACACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 90 bp ATGAAATCCTCTCACCTCCACCTTTTAAACAGCTTCAAATCCGACTaGTTCATACCCCTCAGTGGCCTCCATCCTGGTCCAGCCACCATC +
Preference number: 1 (lower is better)
Translates to: MKSSHLHLLNSFKSD*FIPLSGLHPGPATI
Trigger: GATGGTGGCTGGACCAGGATGGAGGCCACTGAGGGGTATGAAGCAGTCGGATTTGAAGCTGTTTAAAAGGTGGAGGTGAGAGGATTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR CCA 90 bp ATGTCCTACAAACACTGCCAGCCTAACCTTTCCAAAGAGCACACGTaGTTCTCCCCCTACCCGAACCCAATCTCTCTATCTTTAGTCTCT +
Preference number: 1 (lower is better)
Translates to: MSYKHCQPNLSKEHT*FSPYPNPISLSLVS
Trigger: AGAGACTAAAGATAGAGAGATTGGGTTCGGGTAGGGGGAGAACCACGTGTGCTCTTTGGAAAGGTTAGGCTGGCAGTGTTTGTAGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR CAA 90 bp GGAGCCGGAGGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTaGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGGTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: GAGGQGPEGALRELA*LLAQAAAQAAVVPA
Trigger: GGCTGGCACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCCTCCGGCTCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR-3UTR CCA 90 bp GGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCCGGCGCAGGCGGCAGTaGTGCCAGCCACGGCGGATC +
Preference number: 2 (lower is better)
Translates to: GPGRRAPGAGVAPRPGCGRRRRQ*CQPRRI
Trigger: GATCCGCCGTGGCTGGCACCACTGCCGCCTGCGCCG...GCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR-3UTR CCA 90 bp GTCCCCGAGGACAAGCCGCGGCTGGTGGGGACCTCGCCCGGGCCGGAGCCGGAGGCGCGCTCCGGGAGCTaGCGTTGCTCCTCGCCCAGG +
Preference number: 2 (lower is better)
Translates to: VPEDKPRLVGTSPGPEPEARSGS*RCSSPR
Trigger: CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGC...CTCCGGCTCCGGCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCTCGGGGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR-3UTR GCA 90 bp GAGGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGGCTCCTCGCCCAGGCTaGGGCGCAGGCGGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: EGRARKARSGSWRCSSPRAPRPG*GAGGSG
Trigger: ACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGC...CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCCTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR-3UTR CCA 90 bp GAGGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGAGGACAAGCCGCGGCTaGTGGGGACCTCGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: EGRARKARSGSWRCSSPRRTSRG*WGPRPG
Trigger: GCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCT...CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR-3UTR CCA 90 bp GGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGGTGCCAGAGGACAAGCCGCGGCTaGTGGGGACCTCGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: GSWRCSSPRLRRRRQWCQRTSRG*WGPRPG
Trigger: GCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCT...CTGGCACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR-3UTR CCA 90 bp GGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCTCTCAAAGCCGAGCTTaGCGAAGCGCAGGGCGCCCC +
Preference number: 2 (lower is better)
Translates to: GPGRRAPGAGVAPRPGCGSQSRA*RSAGRP
Trigger: GGGGCGCCCTGCGCTTCGCCAAGCTCGGCTTTGAGA...GCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585889.1
3UTR-3UTR GCA 90 bp GAGGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCGGCGGATCTCCGACTaGACCTGTGAGACGATGGCG +
Preference number: 2 (lower is better)
Translates to: EGRARKARSGSWRCSSPRRRISD*TCETMA
Trigger: CGCCATCGTCTCACAGGTGCAGTCGGAGATCCGCCG...CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263281.7
3UTR-3UTR GCA 90 bp GGCGCCCCGGGCCTGTTCCTCTGTCACGGGAGCAAACACCACCTCGTGGACACCGCTCCTCGCCCAGGCTaGGGCGCAGGCGGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: GAPGLFLCHGSKHHLVDTAPRPG*GAGGSG
Trigger: ACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGC...GGTGTCCACGAGGTGGTGTTTGCTCCCGTGACAGAGGAACAGGCCCGGGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
3UTR-3UTR CCA 90 bp CAGACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCGCGCGCTCCGGGAGCTaGCGTTGCTCCTCGCCCAGG +
Preference number: 2 (lower is better)
Translates to: QTRGSRPLAVTFQLPAGLARSGS*RCSSPR
Trigger: CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGC...GAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR-3UTR GCA 90 bp TTCCTCTGTCACGGGAGCAAACACCACCTCGTGGACACCCAGCAGGGGCACCAGTCCCGGCAGCGCATTTaGCGTGTCCTCAGCTTGGAC +
Preference number: 2 (lower is better)
Translates to: FLCHGSKHHLVDTQQGHQSRQRI*RVLSLD
Trigger: GTCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGA...CTGGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTGCTCCCGTGACAGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
3UTR CAA 90 bp CAGCGTGGAGCGAGCCAGCCTCAGCCGGTAATCCCGGCAGCGCATTaGCCGTGTCCTCAGCTTGGACAGGAGAATGCCAAGAATGCGGAT +
Preference number: 2 (lower is better)
Translates to: QRGASQPQPVIPAAH*PCPQLGQENAKNAD
Trigger: ATCCGCATTCTTGGCATTCTCCTGTCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGATTACCGGCTGAGGCTGGCTCGCTCCACGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585889.1
3UTR-3UTR CCA 90 bp AAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTGCTTGAGAGACCCGTGGTaGGAGGATTGCTTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: KDSGDMRPHSAASSGPGCLRDPW*EDCLSP
Trigger: TGGGCTCAAGCAATCCTCCCACCACGGGTCTCTCAA...GCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR CCA 90 bp AAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTGCACTTTGAGAGACCCGTaGTGGGAGGATTGCTTGAGC +
Preference number: 2 (lower is better)
Translates to: KDSGDMRPHSAASSGPGCTLRDP*WEDCLS
Trigger: GCTCAAGCAATCCTCCCACCACGGGTCTCTCAAAGT...GCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR CCA 90 bp GCCTGTAATCCCAGCTACCCGGGAGGCTTGAACTCGGGAGGTGGAGGGTGCAGTCACCTCTTTCGGGGATaGCTTAAGTGTCACCTCCTT +
Preference number: 2 (lower is better)
Translates to: ACNPSYPGGLNSGGGGCSHLFRG*LKCHLL
Trigger: AAGGAGGTGACACTTAAGCCATCCCCGAAAGAGGTG...ACTGCACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGCTGGGATTACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR TCA 90 bp ATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCAGGTGGAGGGTGCAGTaGGCTGAAATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: ITLSGPSASHITISSSPLRWRVQ*AEIAPL
Trigger: CAGTGGTGCAATTTCAGCTCACTGCACCCTCCACCT...GAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR TCA 90 bp TCTCTATCTTTAGTCTCTCCACCATCCAAAGCCAAGGAGTCCTCTCTGCTGCTGGCTACCCGGGAGGCTTaGACTCGGGAGGTGGAGGGT +
Preference number: 2 (lower is better)
Translates to: SLSLVSPPSKAKESSLLLATREA*TREVEG
Trigger: ACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGC...CAGCAGCAGAGAGGACTCCTTGGCTTTGGATGGTGGAGAGACTAAAGATAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR CAA 90 bp CTTCACCATTTCCCCAGCGTCCTCCGTACTGGGCCTGGCACGCAGTaGGCACTCAATAAATCCATGCTAACTGAACAGACACGGGGATCC +
Preference number: 2 (lower is better)
Translates to: LHHFPSVLRTGPGTQ*ALNKSMLTEQTRGS
Trigger: GGATCCCCGTGTCTGTTCAGTTAGCATGGATTTATTGAGTGCCAACTGCGTGCCAGGCCCAGTACGGAGGACGCTGGGGAAATGGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR TCA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCAGGTGGAGGGTGCAGTaGGCTGAAATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: QITLSGPSASHITISSSPRWRVQ*AEIAPL
Trigger: CAGTGGTGCAATTTCAGCTCACTGCACCCTCCACCT...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR CCA 90 bp GCCTGTAATCCCAGCTACCCGGGAGGCTTGAACTCGGGAGGTGGAGGGTGCAGTAGTTCAAGACCAACCTaGGTAAGAGTGACATCCTCA +
Preference number: 2 (lower is better)
Translates to: ACNPSYPGGLNSGGGGCSSSRPT*VRVTSS
Trigger: TGAGGATGTCACTCTTACCCAGGTTGGTCTTGAACT...ACTGCACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGCTGGGATTACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR CCA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCTTGAGAGACCCGTGGTaGGAGGATTGCTTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: QITLSGPSASHITISSSPLRDPW*EDCLSP
Trigger: TGGGCTCAAGCAATCCTCCCACCACGGGTCTCTCAA...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR CCA 90 bp ATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCACTTTGAGAGACCCGTaGTGGGAGGATTGCTTGAGC +
Preference number: 2 (lower is better)
Translates to: ITLSGPSASHITISSSPLTLRDP*WEDCLS
Trigger: GCTCAAGCAATCCTCCCACCACGGGTCTCTCAAAGT...GAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR CCA 90 bp TGTGTAGGGGGAGGATTTAGGGGTGAGGGTCTTGTGGGTGTATGTACAGGTGGTCTTCATACCCCTCAGTaGCCTCCATCCTGGTCCAGC +
Preference number: 2 (lower is better)
Translates to: CVGGGFRGEGLVGVCTGGLHTPQ*PPSWSS
Trigger: GCTGGACCAGGATGGAGGCCACTGAGGGGTATGAAG...ACCACCTGTACATACACCCACAAGACCCTCACCCCTAAATCCTCCCCCTACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR TCA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTTACTCCAGCCAAGGCTaGGCGCCTTCCTGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: PLLASLHNHSIACVELDVYSSQG*APSCPR
Trigger: CCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGTA...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR GCA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCAAATCCCAACTTGGGTaGCCCTGCCCACTTCTCTGT +
Preference number: 2 (lower is better)
Translates to: QITLSGPSASHITISSSPKSQLG*PCPLLC
Trigger: ACAGAGAAGTGGGCAGGGGCACCCAAGTTGGGATTT...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR GCA 90 bp TGTGTAGGGGGAGGATTTAGGGGTGAGGGTCTTGTGGGTGTATGTACAGGTGGTAGGAGTCCTCTCTGCTaGTGTGTCCTCATGTGCTCC +
Preference number: 2 (lower is better)
Translates to: CVGGGFRGEGLVGVCTGGRSPLC*CVLMCS
Trigger: GGAGCACATGAGGACACAGCAGCAGAGAGGACTCCT...ACCACCTGTACATACACCCACAAGACCCTCACCCCTAAATCCTCCCCCTACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR GCA 90 bp TTATACTTTATTTACAAGAGCCTTGCCCTAAGGCCCCCACCCCGCGAGAACCCAGCCTTGCCTCACCTGTaGTCCGGTCCACACCAAATC +
Preference number: 2 (lower is better)
Translates to: LYFIYKSLALRPPPRENPALPHL*SGPHQI
Trigger: GATTTGGTGTGGACCGGAGCACAGGTGAGGCAAGGC...TGGGTTCTCGCGGGGTGGGGGCCTTAGGGCAAGGCTCTTGTAAATAAAGTATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590918.6
3UTR-3UTR CCA 90 bp ATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCCACCTCTTTCGGGGATaGCTTAAGTGTCACCTCCTT +
Preference number: 2 (lower is better)
Translates to: ITLSGPSASHITISSSPLHLFRG*LKCHLL
Trigger: AAGGAGGTGACACTTAAGCCATCCCCGAAAGAGGTG...GAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR TCA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCAGCTCTCCCCAAAGTaGTCTCTTTCACCTCTTTCG +
Preference number: 2 (lower is better)
Translates to: QITLSGPSASHITISSSPQLSPK*SLSPLS
Trigger: CGAAAGAGGTGAAAGAGATCACTTTGGGGAGAGCTG...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR TCA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCCAATGCACCTGAAATaGAATCCCAACTTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: QITLSGPSASHITISSSPPMHLK*NPNLGA
Trigger: GGCACCCAAGTTGGGATTTCATTTCAGGTGCATTGG...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR TCA 90 bp TGTGTAGGGGGAGGATTTAGGGGTGAGGGTCTTGTGGGTGTATGTACAGGTGGTCAGCTCTCCCCAAAGTaGTCTCTTTCACCTCTTTCG +
Preference number: 2 (lower is better)
Translates to: CVGGGFRGEGLVGVCTGGQLSPK*SLSPLS
Trigger: CGAAAGAGGTGAAAGAGATCACTTTGGGGAGAGCTG...ACCACCTGTACATACACCCACAAGACCCTCACCCCTAAATCCTCCCCCTACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR TCA 90 bp TCTCTATCTTTAGTCTCTCCACCATCCAAAGCCAAGGAGTCCTCTCTGCTGCTGCCCACCTGTTGGCTCTaGCTTAATTCTACTCCAGCC +
Preference number: 2 (lower is better)
Translates to: SLSLVSPPSKAKESSLLLPTCWL*LNSTPA
Trigger: GGCTGGAGTAGAATTAAGTCAGAGCCAACAGGTGGG...CAGCAGCAGAGAGGACTCCTTGGCTTTGGATGGTGGAGAGACTAAAGATAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 72 bp GGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTaGTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: GRARKARSGSWR*SSPRLRRRRQW
Trigger: CCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR CCA 72 bp CAGGCCCTGGGAGGGTCCCCGAGGACAAGCCGCGGCTaGTGGGGACCTCGCCCGGGCCGGAGCCGGAGGGCA +
Preference number: 3 (lower is better)
Translates to: QALGGSPRTSRG*WGPRPGRSRRA
Trigger: TGCCCTCCGGCTCCGGCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCTCGGGGACCCTCCCAGGGCCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR-3UTR CAA 90 bp GTCCCCGAGGACAAGCCGCGGCTGGTGGGGACCTCGCCCGGGCCGGAGCCGGAGCTCCGGGAGCTGGCGTaGCTCCTCGCCCAGGCTGCG +
Preference number: 3 (lower is better)
Translates to: VPEDKPRLVGTSPGPEPELRELA*LLAQAA
Trigger: CGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAG...CTCCGGCTCCGGCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCTCGGGGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR-3UTR CAA 90 bp GAGGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTCCGGGAGCTGGCGTaGCTCCTCGCCCAGGCTGCG +
Preference number: 3 (lower is better)
Translates to: EGRARKARSGSWRCSSPRLRELA*LLAQAA
Trigger: CGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAG...CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCCTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR-3UTR CAA 90 bp GCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGTGCCGTGTCCTCAGCTaGGACAGGAGAATGCCAAGA +
Preference number: 3 (lower is better)
Translates to: ALRELALLLAQAAAQAAVCRVLS*DRRMPR
Trigger: TCTTGGCATTCTCCTGTCCAAGCTGAGGACACGGCA...CACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585889.1
3UTR CCA 72 bp ATCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTaGCCTCATTCCCAGGCCCTGGGAGGGTCCCCGAGG +
Preference number: 3 (lower is better)
Translates to: IPPPSSNFPTPG*PHSQALGGSPR
Trigger: CCTCGGGGACCCTCCCAGGGCCTGGGAATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
3UTR GCA 72 bp GTTCCAGGGGCCACCCATCTAAGGACAGTGGGGATATaGGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCT +
Preference number: 3 (lower is better)
Translates to: VPGATHLRTVGI*VLTPQPAVALA
Trigger: AGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTTAGATGGGTGGCCCCTGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 72 bp ATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTaGTCTGGATATAAAGTTTCAGCTGCGAGGCCTGCC +
Preference number: 3 (lower is better)
Translates to: MRPHSAASSGPG*SGYKVSAARPA
Trigger: GGCAGGCCTCGCAGCTGAAACTTTATATCCAGAGCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 72 bp TGTACAGGTGGTCCAGCCACAATGAGACTGTCAGCATaGCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCA +
Preference number: 3 (lower is better)
Translates to: CTGGPATMRLSA*PLILPGSRGHP
Trigger: TGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAGTCTCATTGTGGCTGGACCACCTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR CAA 90 bp GCACTCAATAAATCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCAATCTCAAAGCCGAGCTaGGCGAAGCGCAGGGCGCCC +
Preference number: 3 (lower is better)
Translates to: ALNKSMLTEQTRGSRPLAISKPS*AKRRAP
Trigger: GGGCGCCCTGCGCTTCGCCAAGCTCGGCTTTGAGAT...TGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGATTTATTGAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585889.1
3UTR GCA 72 bp AGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATaGTATCGCTTCCGCCTAGAATCCTGTTCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: RLSAFLPKGLCL*YRFRLESCSPA
Trigger: AGCTGGAGAACAGGATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 72 bp CAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTaGCTATGCTATCGCTTCCGCCTAGAATCCTGTTCT +
Preference number: 3 (lower is better)
Translates to: QPRLSAFLPKGL*LCYRFRLESCS
Trigger: AGAACAGGATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 72 bp CTCCGGTCCACACCAAATCACCCTCTCAGGACCCAGTaGCTCTCACATTACTATCTCCAGCTCGCCCCTCTC +
Preference number: 3 (lower is better)
Translates to: LRSTPNHPLRTQ*LSHYYLQLAPL
Trigger: GAGAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTGGTGTGGACCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR CAA 90 bp TCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAAATCCCGGCAGCGCATTaGCCGTGTCCTCAGCTTGGA +
Preference number: 3 (lower is better)
Translates to: SMLTEQTRGSRPLAVTFQIPAAH*PCPQLG
Trigger: TCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGAT...TTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585889.1
3UTR GCA 72 bp GCTCTGGATATAAAGTTTCAGCTGCGAGGCCTGCCTTaGCTCACCTGTGCTCCGGTCCACACCAAATCACCC +
Preference number: 3 (lower is better)
Translates to: ALDIKFQLRGLP*LTCAPVHTKSP
Trigger: GGGTGATTTGGTGTGGACCGGAGCACAGGTGAGGCAAGGCAGGCCTCGCAGCTGAAACTTTATATCCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR-3UTR CAA 90 bp ATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCAAAACATTAGCCCATTaGGGCCGGGCATGGTGGCTT +
Preference number: 3 (lower is better)
Translates to: ITLSGPSASHITISSSPLKTLAH*GRAWWL
Trigger: AAGCCACCATGCCCGGCCCAAATGGGCTAATGTTTT...GAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR TCA 72 bp CTGCCCACTTCTCTGTCTCTCCCCACCTGTTGGCTCTaGCTTAATTCTACTCCAGCCAAGGCTGAGCGCCTT +
Preference number: 3 (lower is better)
Translates to: LPTSLSLPTCWL*LNSTPAKAERL
Trigger: AAGGCGCTCAGCCTTGGCTGGAGTAGAATTAAGTCAGAGCCAACAGGTGGGGAGAGACAGAGAAGTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR TCA 72 bp GCCTCTCACATTACTATCTCCAGCTCGCCCCTCTCCTaGGAGCTCCAGACCCTTACACTCAGTGTCCTGTCA +
Preference number: 3 (lower is better)
Translates to: ASHITISSSPLS*ELQTLTLSVLS
Trigger: TGACAGGACACTGAGTGTAAGGGTCTGGAGCTCTCAGGAGAGGGGCGAGCTGGAGATAGTAATGTGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR TCA 72 bp GTCTTGTGGGTGTATGTACAGGTGGTCCAGCCACAATaGGACTGTCAGCATGCCCCCTCATTCTCCCAGGTT +
Preference number: 3 (lower is better)
Translates to: VLWVYVQVVQPQ*DCQHAPSFSQV
Trigger: AACCTGGGAGAATGAGGGGGCATGCTGACAGTCTCATTGTGGCTGGACCACCTGTACATACACCCACAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 72 bp AATGCACCTGAAATGAAATCCCAACTTGGGTGCCCCTaGCCACTTCTCTGTCTCTCCCCACCTGTTGGCTCT +
Preference number: 3 (lower is better)
Translates to: NAPEMKSQLGCP*PLLCLSPPVGS
Trigger: AGAGCCAACAGGTGGGGAGAGACAGAGAAGTGGGCAGGGGCACCCAAGTTGGGATTTCATTTCAGGTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR CCA 72 bp TCTCCCCAAAGTGATCTCTTTCACCTCTTTCGGGGATaGCTTAAGTGTCACCTCCTTGGAGACGCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: SPQSDLFHLFRG*LKCHLLGDASQ
Trigger: CTGGGAGGCGTCTCCAAGGAGGTGACACTTAAGCCATCCCCGAAAGAGGTGAAAGAGATCACTTTGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR TCA 72 bp CCCCCAAGAGACACTCCTAAGAATCTCCAATGCACCTaGAATGAAATCCCAACTTGGGTGCCCCTGCCCACT +
Preference number: 3 (lower is better)
Translates to: PPRDTPKNLQCT*NEIPTWVPLPT
Trigger: AGTGGGCAGGGGCACCCAAGTTGGGATTTCATTTCAGGTGCATTGGAGATTCTTAGGAGTGTCTCTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 72 bp TCTCACCTCCACCTTTTAAACAGCTTCAAATCCGACTaGTTCATACCCCTCAGTGGCCTCCATCCTGGTCCA +
Preference number: 3 (lower is better)
Translates to: SHLHLLNSFKSD*FIPLSGLHPGP
Trigger: TGGACCAGGATGGAGGCCACTGAGGGGTATGAAGCAGTCGGATTTGAAGCTGTTTAAAAGGTGGAGGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 72 bp TCTCTCCACCATCCAAAGCCAAGGAGTCCTCTCTGCTaGTGTGTCCTCATGTGCTCCTTCATGAAATCCTCT +
Preference number: 3 (lower is better)
Translates to: SLHHPKPRSPLC*CVLMCSFMKSS
Trigger: AGAGGATTTCATGAAGGAGCACATGAGGACACAGCAGCAGAGAGGACTCCTTGGCTTTGGATGGTGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR CCA 72 bp AAACACTGCCAGCCTAACCTTTCCAAAGAGCACACGTaGTTCTCCCCCTACCCGAACCCAATCTCTCTATCT +
Preference number: 3 (lower is better)
Translates to: KHCQPNLSKEHT*FSPYPNPISLS
Trigger: AGATAGAGAGATTGGGTTCGGGTAGGGGGAGAACCACGTGTGCTCTTTGGAAAGGTTAGGCTGGCAGTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR GCA 72 bp CCTTACACTCAGTGTCCTGTCATGTCCTACAAACACTaGCAGCCTAACCTTTCCAAAGAGCACACGTGGTTC +
Preference number: 3 (lower is better)
Translates to: PYTQCPVMSYKH*QPNLSKEHTWF
Trigger: GAACCACGTGTGCTCTTTGGAAAGGTTAGGCTGGCAGTGTTTGTAGGACATGACAGGACACTGAGTGTAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR CAA 72 bp GGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTaGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GQGPEGALRELA*LLAQAAAQAAV
Trigger: CACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGCGGCGCAGGCGGCAGTaGTGCCAGCCACGGCGGATC +
Preference number: 4 (lower is better)
Translates to: ARSGSWRCSSPRLRRRRQRRRRQ*CQPRRI
Trigger: GATCCGCCGTGGCTGGCACCACTGCCGCCTGCGCCG...CTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAAGGACAAGCCGCGGCTaGTGGGGACCTCGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GALRELALLLAQAAAQAARTSRG*WGPRPG
Trigger: GCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCT...TGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp GCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTCACGATCTGGGCCGTaGGGCAGGCAGCGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ARSGSWRCSSPRLRRRRQSRSGP*GRQRGP
Trigger: AGGCCCTCGCTGCCTGCCGCACGGCCCAGATCGTGA...CTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGGTGCCAGCGGCGCAGGCGGCAGTaGTGCCAGCCACGGCGGATC +
Preference number: 4 (lower is better)
Translates to: GSWRCSSPRLRRRRQWCQRRRRQ*CQPRRI
Trigger: GATCCGCCGTGGCTGGCACCACTGCCGCCTGCGCCG...CTGGCACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GTCCCCGAGGACAAGCCGCGGCTGGTGGGGACCTCGCCCGGGCCGGAGCCGGAGTCTCAAAGCCGAGCTTaGCGAAGCGCAGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: VPEDKPRLVGTSPGPEPESQSRA*RSAGRP
Trigger: GGGGCGCCCTGCGCTTCGCCAAGCTCGGCTTTGAGA...CTCCGGCTCCGGCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCTCGGGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR TCA 90 bp CGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGCAGACGGTCTCGGCTaGGAATGGCCGCAGCTCGCA +
Preference number: 4 (lower is better)
Translates to: RAPGAGVAPRPGCGAGGSADGLG*EWPQLA
Trigger: TGCGAGCTGCGGCCATTCTCAGCCGAGACCGTCTGC...ACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR TCA 90 bp GAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGCGATCACCCAGGGAATaGCGAAAAGCGCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: EGALRELALLLAQAAAQARSPRE*RKARGP
Trigger: GGGCCCCCGCGCTTTTCGTCATTCCCTGGGTGATCG...CGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS-3UTR GCA 90 bp GAGGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGAGCTCCCCCGCCGTCTaGCCCTTAGAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: EGRARKARSGSWRCSSPRSSPAV*PLEPVS
Trigger: GGAGACAGGCTCTAAGGGGCAGACGGCGGGGGAGCT...CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp GGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTAGCTCCCCCGCCGTCTaGCCCTTAGAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GQGPEGALRELALLLAQASSPAV*PLEPVS
Trigger: GGAGACAGGCTCTAAGGGGCAGACGGCGGGGGAGCT...AGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GAGGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGTACTGGGTCACGATCTaGGCCGTGCGGCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: EGRARKARSGSWRCSSPRYWVTI*AVRQAA
Trigger: CGCTGCCTGCCGCACGGCCCAGATCGTGACCCAGTA...CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCCTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp AAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGTACTGGGTCACGATCTaGGCCGTGCGGCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: KARSGSWRCSSPRLRRRRYWVTI*AVRQAA
Trigger: CGCTGCCTGCCGCACGGCCCAGATCGTGACCCAGTA...CCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGCAAACACCACCTCGTaGACACCCAGCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: GALRELALLLAQAAAQAAANTTS*TPSRGT
Trigger: GGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTGC...TGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR TCA 90 bp CCGGCTGGCCTCATTCCCAGGCCCTGGGAGGGTCCCCGAGGACAAGCCGCGGCTCAGCAGCCCGCACAGTaGGAGCCGCAGCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PAGLIPRPWEGPRGQAAAQQPAQ*EPQQQL
Trigger: CAGCTGCTGCTGCGGCTCTCACTGTGCGGGCTGCTG...AGCCGCGGCTTGTCCTCGGGGACCCTCCCAGGGCCTGGGAATGAGGCCAGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp GGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCCCCATTGGCCATCACTaGCACACTGGCGGAGGACGA +
Preference number: 4 (lower is better)
Translates to: GPGRRAPGAGVAPRPGCGPIGHH*HTGGGR
Trigger: TCGTCCTCCGCCAGTGTGGCAGTGATGGCCAATGGG...GCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCTGCCAAGGTCTCCTaGCACTCCCTGCGGTACCGT +
Preference number: 4 (lower is better)
Translates to: EGALRELALLLAQAAAQAAAKVS*HSLRYR
Trigger: ACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGC...CGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGGGCTAGCAGCAGTGTaGCGAGAGACAGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GALRELALLLAQAAAQAAGLAAV*RETGSS
Trigger: GCTACTCCCTGTCTCTCGCCACACTGCTGCTAGCCC...TGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGGCAGCCACGTGTAGTTaGCACCCACGCAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: ARSGSWRCSSPRLRRRRQAATCS*HPRSTG
Trigger: CCCAGTACTGCGTGGGTGCCAACTACACGTGGCTGC...CTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR TCA 90 bp GGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTAGCAGTAGAGGACGCTaGCCAGGAAGCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQGPEGALRELALLLAQASSRGR*PGSPGR
Trigger: CCTTCCAGGGCTTCCTGGTCAGCGTCCTCTACTGCT...AGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp GGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGGTGCCAGTCTCCTGGCACTCCCTaGGGTACCGTTCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GSWRCSSPRLRRRRQWCQSPGTP*GTVPSA
Trigger: AGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGA...CTGGCACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp CCGGCTGGCCTCATTCCCAGGCCCTGGGAGGGTCCCCGAGGACAAGCCGCGGCTAGGCGGTTCCGCGGCTaGCAAGGTCTCCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: PAGLIPRPWEGPRGQAAARRFRG*QGLLAL
Trigger: GAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCT...AGCCGCGGCTTGTCCTCGGGGACCCTCCCAGGGCCTGGGAATGAGGCCAGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp TCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGGTGCCCCCAGTCCTGCTCCTaGTCACTTGCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGSWRCSSPRLRRRRQWCPQSCS*SLAPAA
Trigger: GGCTGCAGGAGCAAGTGACCAGGAGCAGGACTGGGG...GCACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp CCGGCTGGCCTCATTCCCAGGCCCTGGGAGGGTCCCCGAGGACAAGCCGCGGCTCCTGTCTCCGCCCTCTaGAGCAGCAGCCCGCACAGT +
Preference number: 4 (lower is better)
Translates to: PAGLIPRPWEGPRGQAAAPVSAL*SSSPHS
Trigger: ACTGTGCGGGCTGCTGCTCCAGAGGGCGGAGACAGG...AGCCGCGGCTTGTCCTCGGGGACCCTCCCAGGGCCTGGGAATGAGGCCAGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAAGGACGCACGGGCAGTaGCATTGGGTGCAGCATAGT +
Preference number: 4 (lower is better)
Translates to: GALRELALLLAQAAAQAARTHGQ*HWVQHS
Trigger: ACTATGCTGCACCCAATGCCACTGCCCGTGCGTCCT...TGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GTCCCCGAGGACAAGCCGCGGCTGGTGGGGACCTCGCCCGGGCCGGAGCCGGAGAAACCTGCAGCCACATaGTGGTGCCAGGGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: VPEDKPRLVGTSPGPEPEKPAAT*WCQGRY
Trigger: GTACCTGCCCTGGCACCACCATGTGGCTGCAGGTTT...CTCCGGCTCCGGCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCTCGGGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GAGGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGGCAGCCACGTGTAGTTaGCACCCACGCAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: EGRARKARSGSWRCSSPRAATCS*HPRSTG
Trigger: CCCAGTACTGCGTGGGTGCCAACTACACGTGGCTGC...CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR TCA 90 bp GCCGGAGGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCGCAACCGCTCCAAGATaGGCCTTTGGTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: AGGQGPEGALRELALLLAATAPR*AFGPER
Trigger: CCTTTCTGGACCAAAGGCTCATCTTGGAGCGGTTGC...GGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCCTCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp GAAGCGCAGGGCGCCCCGGGCCTGTTCCTCTGTCACGGGAGCAAACACCACCTCTCCGGGAGCTGGCGTTaGTCCTCGCCCAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: EAQGAPGLFLCHGSKHHLSGSWR*SSPRLR
Trigger: CCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGA...GAGGTGGTGTTTGCTCCCGTGACAGAGGAACAGGCCCGGGGCGCCCTGCGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR CCA 90 bp GAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGCCATCACTGCCACACTaGCGGAGGACGAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: EGALRELALLLAQAAAQAPSLPH*RRTKPA
Trigger: TGCAGGTTTCGTCCTCCGCCAGTGTGGCAGTGATGG...CGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCCTCCAAAGTCCCCATTaGCCATCACTGCCACACTGG +
Preference number: 4 (lower is better)
Translates to: ARKARSGSWRCSSPRLRRLQSPH*PSLPHW
Trigger: CCAGTGTGGCAGTGATGGCCAATGGGGACTTTGGAG...GCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp GCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGTTGCGCTCCCAGCACTaGGTGTTCTCGTACAGGTAC +
Preference number: 4 (lower is better)
Translates to: ALRELALLLAQAAAQAAVLRSQH*VFSYRY
Trigger: GTACCTGTACGAGAACACGCAGTGCTGGGAGCGCAA...CACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS-3UTR GCA 90 bp CACCTCCTTGGAGACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTGCTCCTCGCCCAGGCTaGGGCGCAGGCGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: HLLGDASQTTLGPLLASLAPRPG*GAGGSG
Trigger: ACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGC...AAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTCTCCAAGGAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp CCGGCTGGCCTCATTCCCAGGCCCTGGGAGGGTCCCCGAGGACAAGCCGCGGCTGGGCTAGCAGCAGTGTaGCGAGAGACAGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PAGLIPRPWEGPRGQAAAGLAAV*RETGSS
Trigger: GCTACTCCCTGTCTCTCGCCACACTGCTGCTAGCCC...AGCCGCGGCTTGTCCTCGGGGACCCTCCCAGGGCCTGGGAATGAGGCCAGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp TCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATTCCCAGGCCCGCGCGCTCCGGGAGCTaGCGTTGCTCCTCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SRPLAVTFQLPAGLIPRPARSGS*RCSSPR
Trigger: CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGC...GGGCCTGGGAATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp CACCTCCTTGGAGACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTGCGCGCTCCGGGAGCTaGCGTTGCTCCTCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HLLGDASQTTLGPLLASLARSGS*RCSSPR
Trigger: CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGC...AAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTCTCCAAGGAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATTCCCAGGCCCAGGACAAGCCGCGGCTaGTGGGGACCTCGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SRPLAVTFQLPAGLIPRPRTSRG*WGPRPG
Trigger: GCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCT...GGGCCTGGGAATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp CACCTCCTTGGAGACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTAGGACAAGCCGCGGCTaGTGGGGACCTCGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: HLLGDASQTTLGPLLASLRTSRG*WGPRPG
Trigger: GCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCT...AAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTCTCCAAGGAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp GAAGCGCAGGGCGCCCCGGGCCTGTTCCTCTGTCACGGGAGCAAACACCACCTCGCAGACGGTCTCGGCTaGGAATGGCCGCAGCTCGCA +
Preference number: 4 (lower is better)
Translates to: EAQGAPGLFLCHGSKHHLADGLG*EWPQLA
Trigger: TGCGAGCTGCGGCCATTCTCAGCCGAGACCGTCTGC...GAGGTGGTGTTTGCTCCCGTGACAGAGGAACAGGCCCGGGGCGCCCTGCGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR GCA 90 bp AGCGCAGGGCGCCCCGGGCCTGTTCCTCTGTCACGGGAGCAAACACCACCTCGTAGGCGGTTCCGCGGCTaGCAAGGTCTCCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: SAGRPGPVPLSREQTPPRRRFRG*QGLLAL
Trigger: GAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCT...ACGAGGTGGTGTTTGCTCCCGTGACAGAGGAACAGGCCCGGGGCGCCCTGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR GCA 90 bp CAGCCTCAGCCGGTAATCCCGGCAGCGCATTTGCCGTGTCCTCAGCTTGGACAGGCTCCTCGCCCAGGCTaGGGCGCAGGCGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: QPQPVIPAAHLPCPQLGQAPRPG*GAGGSG
Trigger: ACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGC...CTGTCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGATTACCGGCTGAGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR GCA 90 bp AAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTGCTCCGGGAGCTGGCGTTaGTCCTCGCCCAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KDSGDMRPHSAASSGPGCSGSWR*SSPRLR
Trigger: CCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGA...GCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp TCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATTCCCAGGCCCCAGCAGCCCGCACAGTaGGAGCCGCAGCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRPLAVTFQLPAGLIPRPQQPAQ*EPQQQL
Trigger: CAGCTGCTGCTGCGGCTCTCACTGTGCGGGCTGCTG...GGGCCTGGGAATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp AGCGCAGGGCGCCCCGGGCCTGTTCCTCTGTCACGGGAGCAAACACCACCTCGTTCTCCTGGCACTCCCTaGGGTACCGTTCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SAGRPGPVPLSREQTPPRSPGTP*GTVPSA
Trigger: AGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGA...ACGAGGTGGTGTTTGCTCCCGTGACAGAGGAACAGGCCCGGGGCGCCCTGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR GCA 90 bp GAGGGCAGGGCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGACAGTGTACATGACCTaGAACCGCTCCAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: EGRARKARSGSWRCSSPRTVYMT*NRSKMS
Trigger: GCTCATCTTGGAGCGGTTGCAGGTCATGTACACTGT...CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGCCCTGCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp CACCTCCTTGGAGACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTTCACGATCTGGGCCGTaGGGCAGGCAGCGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HLLGDASQTTLGPLLASLSRSGP*GRQRGP
Trigger: AGGCCCTCGCTGCCTGCCGCACGGCCCAGATCGTGA...AAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTCTCCAAGGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GAAGCGCAGGGCGCCCCGGGCCTGTTCCTCTGTCACGGGAGCAAACACCACCTCCCCCAGTCCTGCTCCTaGTCACTTGCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EAQGAPGLFLCHGSKHHLPQSCS*SLAPAA
Trigger: GGCTGCAGGAGCAAGTGACCAGGAGCAGGACTGGGG...GAGGTGGTGTTTGCTCCCGTGACAGAGGAACAGGCCCGGGGCGCCCTGCGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR CCA 90 bp TCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATTCCCAGGCCCGCACCTGTGAGACGATaGCGCTCAGAGGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: SRPLAVTFQLPAGLIPRPAPVRR*RSEAAP
Trigger: CGGCGCCGCCTCTGAGCGCCATCGTCTCACAGGTGC...GGGCCTGGGAATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS-3UTR CCA 90 bp ACTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCGGCGCAGGCGGCAGTaGTGCCAGCCACGGCGGATC +
Preference number: 4 (lower is better)
Translates to: TPAKAERLPAQGPLPMLSRRRRQ*CQPRRI
Trigger: GATCCGCCGTGGCTGGCACCACTGCCGCCTGCGCCG...CGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp ACTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGGCGCGCTCCGGGAGCTaGCGTTGCTCCTCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TPAKAERLPAQGPLPMLSARSGS*RCSSPR
Trigger: CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGC...CGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp ACTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGAGGACAAGCCGCGGCTaGTGGGGACCTCGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: TPAKAERLPAQGPLPMLSRTSRG*WGPRPG
Trigger: GCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCT...CGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CACCTCCTTGGAGACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTGCTACCCGGGAGGCTTaGACTCGGGAGGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: HLLGDASQTTLGPLLASLATREA*TREVEG
Trigger: ACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGC...AAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTCTCCAAGGAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATTCCCAGGCCCTGGGATCACGATCTGGGCCGTaGGGCAGGCAGCGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPSSNFPTPGWPHSQALGSRSGP*GRQRGP
Trigger: AGGCCCTCGCTGCCTGCCGCACGGCCCAGATCGTGA...TCCCAGGGCCTGGGAATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp CGTCAGCGTGGAGCGAGCCAGCCTCAGCCGGTAATCCCGGCAGCGCATTTGCCGTCCCGGCAGCGCATTTaGCGTGTCCTCAGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: RQRGASQPQPVIPAAHLPSRQRI*RVLSLD
Trigger: GTCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGA...CGGCAAATGCGCTGCCGGGATTACCGGCTGAGGCTGGCTCGCTCCACGCTGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR GCA 90 bp ACTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGAGCTCCCCCGCCGTCTaGCCCTTAGAGCCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: TPAKAERLPAQGPLPMLSSSPAV*PLEPPP
Trigger: GGGCGGAGGCTCTAAGGGGCAGACGGCGGGGGAGCT...CGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS-3UTR CCA 90 bp CAGACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCGGGCGGCGAAGGGTCTaGTTCGTGCAGGGGCGATCA +
Preference number: 4 (lower is better)
Translates to: QTRGSRPLAVTFQLPAGLGRRRV*FVQGRS
Trigger: TGATCGCCCCTGCACGAACCAGACCCTTCGCCGCCC...GAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GTCCCCGAGGACAAGCCGCGGCTGGTGGGGACCTCGCCCGGGCCGGAGCCGGAGGGCCTCATTCTTCTCTaGGTTCTCACATTGTGTATG +
Preference number: 4 (lower is better)
Translates to: VPEDKPRLVGTSPGPEPEGLILL*VLTLCM
Trigger: CATACACAATGTGAGAACCCAGAGAAGAATGAGGCC...CTCCGGCTCCGGCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCTCGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GCCTGTAATCCCAGCTACCCGGGAGGCTTGAACTCGGGAGGTGGAGGGTGCAGTCAGGCAGCGAGGGCCTaGTTCCACAGCGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ACNPSYPGGLNSGGGGCSQAARA*FHSARA
Trigger: GGCCCTTGCGCTGTGGAACCAGGCCCTCGCTGCCTG...ACTGCACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGCTGGGATTACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp AAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTGCTACTGGGTCACGATCTaGGCCGTGCGGCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: KDSGDMRPHSAASSGPGCYWVTI*AVRQAA
Trigger: CGCTGCCTGCCGCACGGCCCAGATCGTGACCCAGTA...GCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GTCACGGGAGCAAACACCACCTCGTGGACACCCAGCAGGGGCACCAGCGTCAGCGCACCCACGCAGTACTaGGTCACGATCTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VTGANTTSWTPSRGTSVSAPTQY*VTIWAV
Trigger: CACGGCCCAGATCGTGACCCAGTACTGCGTGGGTGC...GCTGACGCTGGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTGCTCCCGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR GCA 90 bp ACTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGTCACGATCTGGGCCGTaGGGCAGGCAGCGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TPAKAERLPAQGPLPMLSSRSGP*GRQRGP
Trigger: AGGCCCTCGCTGCCTGCCGCACGGCCCAGATCGTGA...CGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CTAAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTCTGGTCACTTGCTCCTaGAGCCCCTGCCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: LRTVGICVLTPQPAVALALVTCS*SPCHRC
Trigger: GCAGCGGTGGCAGGGGCTGCAGGAGCAAGTGACCAG...AGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp AAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTGCGCACCCACGCAGTACTaGGTCACGATCTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: KDSGDMRPHSAASSGPGCAPTQY*VTIWAV
Trigger: CACGGCCCAGATCGTGACCCAGTACTGCGTGGGTGC...GCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TCTGTCACGGGAGCAAACACCACCTCGTGGACACCCAGCAGGGGCACCAGCGTCGCAAACACCACCTCGTaGACACCCAGCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: SVTGANTTSWTPSRGTSVANTTS*TPSRGT
Trigger: GGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTGC...GACGCTGGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTGCTCCCGTGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR TCA 90 bp GAAGCGCAGGGCGCCCCGGGCCTGTTCCTCTGTCACGGGAGCAAACACCACCTCAGCCGACAGTGTACATaGCCTGCAACCGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: EAQGAPGLFLCHGSKHHLSRQCT*PATAPR
Trigger: TCTTGGAGCGGTTGCAGGTCATGTACACTGTCGGCT...GAGGTGGTGTTTGCTCCCGTGACAGAGGAACAGGCCCGGGGCGCCCTGCGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR TCA 90 bp GACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTCATAACCATTCCGCAGACGGTCTCGGCTaGGAATGGCCGCAGCTCGCA +
Preference number: 4 (lower is better)
Translates to: DASQTTLGPLLASLHNHSADGLG*EWPQLA
Trigger: TGCGAGCTGCGGCCATTCTCAGCCGAGACCGTCTGC...GGAATGGTTATGAAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp AGCGCAGGGCGCCCCGGGCCTGTTCCTCTGTCACGGGAGCAAACACCACCTCGTAGCCCTGGAAGGAGCTaGGGAAGATCTCAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: SAGRPGPVPLSREQTPPRSPGRS*GRSQSR
Trigger: TCGGCTTTGAGATCTTCCTCAGCTCCTTCCAGGGCT...ACGAGGTGGTGTTTGCTCCCGTGACAGAGGAACAGGCCCGGGGCGCCCTGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR TCA 90 bp GCCTGTAATCCCAGCTACCCGGGAGGCTTGAACTCGGGAGGTGGAGGGTGCAGTTACTCCAGCCAAGGCTaGGCGCCTTCCTGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: ACNPSYPGGLNSGGGGCSYSSQG*APSCPR
Trigger: CCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGTA...ACTGCACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGCTGGGATTACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CTGTCAGCATGCCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGACAGCTCCCCCGCCGTCTaGCCCTTAGAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LSACPLILPGSRGHPSKDSSPAV*PLEPVS
Trigger: GGAGACAGGCTCTAAGGGGCAGACGGCGGGGGAGCT...GTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590918.6
CDS-3UTR GCA 90 bp CTGTCAGCATGCCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGACAGGCGGTTCCGCGGCTaGCAAGGTCTCCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: LSACPLILPGSRGHPSKDRRFRG*QGLLAL
Trigger: GAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCT...GTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp TCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATTCCCAGGCCCGCGGAGGACGAAACCTaGAGCCACATGGTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SRPLAVTFQLPAGLIPRPAEDET*SHMVVP
Trigger: TGGCACCACCATGTGGCTGCAGGTTTCGTCCTCCGC...GGGCCTGGGAATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp CAGACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCTCCCGGCAGCGCATTTaGCGTGTCCTCAGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QTRGSRPLAVTFQLPAGLSRQRI*RVLSLD
Trigger: GTCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGA...GAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp GACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATCGGCGGATCTCCGACTaGACCTGTGAGACGATGGCG +
Preference number: 4 (lower is better)
Translates to: DTGIPPPSSNFPTPGWPHRRISD*TCETMA
Trigger: CGCCATCGTCTCACAGGTGCAGTCGGAGATCCGCCG...ATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS-3UTR GCA 90 bp GACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTCATAACCATTCCCTGCGAGGCCTGCCTTaGCTCACCTGTGCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: DASQTTLGPLLASLHNHSLRGLP*LTCAPV
Trigger: GACCGGAGCACAGGTGAGGCAAGGCAGGCCTCGCAG...GGAATGGTTATGAAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GCCTGTAATCCCAGCTACCCGGGAGGCTTGAACTCGGGAGGTGGAGGGTGCAGTCCCCAGTCCTGCTCCTaGTCACTTGCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ACNPSYPGGLNSGGGGCSPQSCS*SLAPAA
Trigger: GGCTGCAGGAGCAAGTGACCAGGAGCAGGACTGGGG...ACTGCACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGCTGGGATTACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TGGCGAAGCGCAGGGCGCCCCGGGCCTGTTCCTCTGTCACGGGAGCAAACACCACTCCAAAGTCCCCATTaGCCATCACTGCCACACTGG +
Preference number: 4 (lower is better)
Translates to: WRSAGRPGPVPLSREQTPLQSPH*PSLPHW
Trigger: CCAGTGTGGCAGTGATGGCCAATGGGGACTTTGGAG...TGGTGTTTGCTCCCGTGACAGAGGAACAGGCCCGGGGCGCCCTGCGCTTCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR CCA 90 bp CGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTTTCTCACATTGTGTATaGTCTCTCCAAAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RAPGAGVAPRPGCGAGGSFSHCV*SLQSPH
Trigger: ATGGGGACTTTGGAGAGACCATACACAATGTGAGAA...ACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp CACCTCCTTGGAGACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTGGGCTAGCAGCAGTGTaGCGAGAGACAGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: HLLGDASQTTLGPLLASLGLAAV*RETGSS
Trigger: GCTACTCCCTGTCTCTCGCCACACTGCTGCTAGCCC...AAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTCTCCAAGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATGCACCCACGCAGTACTaGGTCACGATCTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: DTGIPPPSSNFPTPGWPHAPTQY*VTIWAV
Trigger: CACGGCCCAGATCGTGACCCAGTACTGCGTGGGTGC...ATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp ACTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGAGAGCCTCCGCCCTCTaGAGCAGCAGCCCGCACAGT +
Preference number: 4 (lower is better)
Translates to: TPAKAERLPAQGPLPMLSRASAL*SSSPHS
Trigger: ACTGTGCGGGCTGCTGCTCCAGAGGGCGGAGGCTCT...CGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS-3UTR TCA 90 bp GAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTTCCGCCTAGAATCGCAGACGGTCTCGGCTaGGAATGGCCGCAGCTCGCA +
Preference number: 4 (lower is better)
Translates to: ERLPAQGPLPMLSLPPRIADGLG*EWPQLA
Trigger: TGCGAGCTGCGGCCATTCTCAGCCGAGACCGTCTGC...GATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATTCCCAGGCCCTGGGAAGCAGTAGAGGACGCTaGCCAGGAAGCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPSSNFPTPGWPHSQALGSSRGR*PGSPGR
Trigger: CCTTCCAGGGCTTCCTGGTCAGCGTCCTCTACTGCT...TCCCAGGGCCTGGGAATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp TTCCTCTGTCACGGGAGCAAACACCACCTCGTGGACACCCAGCAGGGGCACCAGGCGGAGGACGAAACCTaGAGCCACATGGTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: FLCHGSKHHLVDTQQGHQAEDET*SHMVVP
Trigger: TGGCACCACCATGTGGCTGCAGGTTTCGTCCTCCGC...CTGGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTGCTCCCGTGACAGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR GCA 90 bp TTCCTCTGTCACGGGAGCAAACACCACCTCGTGGACACCCAGCAGGGGCACCAGCCCATTGGCCATCACTaGCACACTGGCGGAGGACGA +
Preference number: 4 (lower is better)
Translates to: FLCHGSKHHLVDTQQGHQPIGHH*HTGGGR
Trigger: TCGTCCTCCGCCAGTGTGGCAGTGATGGCCAATGGG...CTGGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTGCTCCCGTGACAGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR GCA 90 bp AAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTGCCCATCACTTCCCACCTaGAGTCCCCTCCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KDSGDMRPHSAASSGPGCPSLPT*SPLLSG
Trigger: CCCAGAAAGGAGGGGACTGCAGGTGGGAAGTGATGG...GCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp AAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTGCGCCTTGCCTCACCTGTaGTCCGGTCCACACCAAATC +
Preference number: 4 (lower is better)
Translates to: KDSGDMRPHSAASSGPGCALPHL*SGPHQI
Trigger: GATTTGGTGTGGACCGGAGCACAGGTGAGGCAAGGC...GCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CACCTCCTTGGAGACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTCCGAGTTCATCCCACTaGACTCCAGCCTGGGCGATA +
Preference number: 4 (lower is better)
Translates to: HLLGDASQTTLGPLLASLPSSSH*TPAWAI
Trigger: TATCGCCCAGGCTGGAGTGCAGTGGGATGAACTCGG...AAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTCTCCAAGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS-3UTR CCA 90 bp CTGTCAGCATGCCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGACGCTGCCAAGGTCTCCTaGCACTCCCTGCGGTACCGT +
Preference number: 4 (lower is better)
Translates to: LSACPLILPGSRGHPSKDAAKVS*HSLRYR
Trigger: ACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGC...GTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp CAGCCTCAGCCGGTAATCCCGGCAGCGCATTTGCCGTGTCCTCAGCTTGGACAGCACGGGCAGTGGCATTaGGTGCAGCATAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: QPQPVIPAAHLPCPQLGQHGQWH*VQHSPS
Trigger: GCTGGGACTATGCTGCACCCAATGCCACTGCCCGTG...CTGTCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGATTACCGGCTGAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR CCA 90 bp CACCTCCTTGGAGACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTAGGACGCACGGGCAGTaGCATTGGGTGCAGCATAGT +
Preference number: 4 (lower is better)
Translates to: HLLGDASQTTLGPLLASLRTHGQ*HWVQHS
Trigger: ACTATGCTGCACCCAATGCCACTGCCCGTGCGTCCT...AAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTCTCCAAGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590918.6
CDS-3UTR CCA 90 bp TTCCTCTGTCACGGGAGCAAACACCACCTCGTGGACACCCAGCAGGGGCACCAGTTTCCAACTCCCGGCTaGCCTCATTCCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FLCHGSKHHLVDTQQGHQFPTPG*PHSQAL
Trigger: CAGGGCCTGGGAATGAGGCCAGCCGGGAGTTGGAAA...CTGGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTGCTCCCGTGACAGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR CCA 90 bp ACTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTCCGCAGCCAGCAGTaGCCCTGGCTGCTCTGGATA +
Preference number: 4 (lower is better)
Translates to: TPAKAERLPAQGPLPMLSLRSQQ*PWLLWI
Trigger: TATCCAGAGCAGCCAGGGCCACTGCTGGCTGCGGAG...CGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR CAA 72 bp GCGAGCCAGCCTCAGCCGGTAATCCCGGCAGCGCATTaGCCGTGTCCTCAGCTTGGACAGGAGAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: ASQPQPVIPAAH*PCPQLGQENAK
Trigger: CTTGGCATTCTCCTGTCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGATTACCGGCTGAGGCTGGCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR TCA 90 bp CAGACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCAGCCGACAGTGTACATaGCCTGCAACCGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: QTRGSRPLAVTFQLPAGLSRQCT*PATAPR
Trigger: TCTTGGAGCGGTTGCAGGTCATGTACACTGTCGGCT...GAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR TCA 90 bp AAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTGCAGCCGACAGTGTACATaGCCTGCAACCGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: KDSGDMRPHSAASSGPGCSRQCT*PATAPR
Trigger: TCTTGGAGCGGTTGCAGGTCATGTACACTGTCGGCT...GCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp ATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCCGATCACCCAGGGAATaGCGAAAAGCGCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ITLSGPSASHITISSSPLRSPRE*RKARGP
Trigger: GGGCCCCCGCGCTTTTCGTCATTCCCTGGGTGATCG...GAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp GCCTGTAATCCCAGCTACCCGGGAGGCTTGAACTCGGGAGGTGGAGGGTGCAGTTCCACCAAATGGCCTTaGCTTCGTTGCGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ACNPSYPGGLNSGGGGCSSTKWP*LRCAPS
Trigger: GCTGGGAGCGCAACGAAGTCAAGGCCATTTGGTGGA...ACTGCACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGCTGGGATTACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp GAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTTCCGCCTAGAATCTACTCCAGCCAAGGCTaGGCGCCTTCCTGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: ERLPAQGPLPMLSLPPRIYSSQG*APSCPR
Trigger: CCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGTA...GATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CACCTCCTTGGAGACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTAGGTGGAGGGTGCAGTaGGCTGAAATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: HLLGDASQTTLGPLLASLRWRVQ*AEIAPL
Trigger: CAGTGGTGCAATTTCAGCTCACTGCACCCTCCACCT...AAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTCTCCAAGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp ATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCCGGAGACAGAGAAGCTaGAGGCGGTTCCGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: ITLSGPSASHITISSSPLRRQRS*RRFRGC
Trigger: GCAGCCGCGGAACCGCCTTCAGCTTCTCTGTCTCCG...GAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS-3UTR GCA 90 bp GACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTCATAACCATTCCGCGGAGGACGAAACCTaGAGCCACATGGTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: DASQTTLGPLLASLHNHSAEDET*SHMVVP
Trigger: TGGCACCACCATGTGGCTGCAGGTTTCGTCCTCCGC...GGAATGGTTATGAAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590918.6
CDS-3UTR GCA 90 bp TGTGTAGGGGGAGGATTTAGGGGTGAGGGTCTTGTGGGTGTATGTACAGGTGGTTCCGGGAGCTGGCGTTaGTCCTCGCCCAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: CVGGGFRGEGLVGVCTGGSGSWR*SSPRLR
Trigger: CCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGA...ACCACCTGTACATACACCCACAAGACCCTCACCCCTAAATCCTCCCCCTACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CTAAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTCAACTTGGGTGCCCCTaGCCACTTCTCTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LRTVGICVLTPQPAVALAQLGCP*PLLCLS
Trigger: GGAGAGACAGAGAAGTGGGCAGGGGCACCCAAGTTG...AGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp GACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTCATAACCATTCCGCGGAGGACGAAACCTaGAGCCACTGTAATCCCGGC +
Preference number: 4 (lower is better)
Translates to: DASQTTLGPLLASLHNHSAEDET*SHCNPG
Trigger: GCCGGGATTACAGTGGCTGCAGGTTTCGTCCTCCGC...GGAATGGTTATGAAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS-3UTR CCA 90 bp CTGTCAGCATGCCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGACCACGGGCAGTGGCATTaGGTGCAGCATAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSACPLILPGSRGHPSKDHGQWH*VQHSPS
Trigger: GCTGGGACTATGCTGCACCCAATGCCACTGCCCGTG...GTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590918.6
CDS-3UTR CCA 90 bp AAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTGCCTCCAAAGTCCCCATTaGCCATCACTGCCACACTGG +
Preference number: 4 (lower is better)
Translates to: KDSGDMRPHSAASSGPGCLQSPH*PSLPHW
Trigger: CCAGTGTGGCAGTGATGGCCAATGGGGACTTTGGAG...GCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCAGGCAGCGAGGGCCTaGTTCCACAGCGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: QITLSGPSASHITISSSPQAARA*FHSARA
Trigger: GGCCCTTGCGCTGTGGAACCAGGCCCTCGCTGCCTG...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp ATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCTACTGGGTCACGATCTaGGCCGTGCGGCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ITLSGPSASHITISSSPLYWVTI*AVRQAA
Trigger: CGCTGCCTGCCGCACGGCCCAGATCGTGACCCAGTA...GAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTTCCGCCTAGAATCGCAAACACCACCTCGTaGACACCCAGCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: ERLPAQGPLPMLSLPPRIANTTS*TPSRGT
Trigger: GGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTGC...GATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp TGTGTAGGGGGAGGATTTAGGGGTGAGGGTCTTGTGGGTGTATGTACAGGTGGTCAGCAGCCCGCACAGTaGGAGCCGCAGCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CVGGGFRGEGLVGVCTGGQQPAQ*EPQQQL
Trigger: CAGCTGCTGCTGCGGCTCTCACTGTGCGGGCTGCTG...ACCACCTGTACATACACCCACAAGACCCTCACCCCTAAATCCTCCCCCTACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590918.6
CDS-3UTR TCA 90 bp GACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATGCAACCGCTCCAAGATaGGCCTTTGGTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: DTGIPPPSSNFPTPGWPHATAPR*AFGPER
Trigger: CCTTTCTGGACCAAAGGCTCATCTTGGAGCGGTTGC...ATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR TCA 90 bp CTGTCAGCATGCCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGACTCCACCAAATGGCCTTaGCTTCGTTGCGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSACPLILPGSRGHPSKDSTKWP*LRCAPS
Trigger: GCTGGGAGCGCAACGAAGTCAAGGCCATTTGGTGGA...GTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp TCCCAGGTTCCAGGGGCCACCCATCTAAGGACAGTGGGGATATGCGTCCTCACTAGCAGTAGAGGACGCTaGCCAGGAAGCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SQVPGATHLRTVGICVLTSSRGR*PGSPGR
Trigger: CCTTCCAGGGCTTCCTGGTCAGCGTCCTCTACTGCT...AGTGAGGACGCATATCCCCACTGTCCTTAGATGGGTGGCCCCTGGAACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CACCTCCTTGGAGACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTCCCACCTGTTGGCTCTaGCTTAATTCTACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: HLLGDASQTTLGPLLASLPTCWL*LNSTPA
Trigger: GGCTGGAGTAGAATTAAGTCAGAGCCAACAGGTGGG...AAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTCTCCAAGGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CTGTCAGCATGCCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGACGTAATCCCAGCACTTTaGGAGACCCGTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSACPLILPGSRGHPSKDVIPAL*ETRGGR
Trigger: CCTCCCACCACGGGTCTCTCAAAGTGCTGGGATTAC...GTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CTAAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTAGGTGGAGGGTGCAGTaGGCTGAAATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: LRTVGICVLTPQPAVALARWRVQ*AEIAPL
Trigger: CAGTGGTGCAATTTCAGCTCACTGCACCCTCCACCT...AGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp GAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTTCCGCCTAGAATCTCCCGGCAGCGCATTTaGCGTGTCCTCAGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ERLPAQGPLPMLSLPPRISRQRI*RVLSLD
Trigger: GTCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGA...GATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp TTCACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTTCCGGGAGCTGGCGTTaGTCCTCGCCCAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: FTVCFPHSVVISRRAGTFSGSWR*SSPRLR
Trigger: CCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGA...AAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp GACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATCGGCGGATCTCCGACTaGACCTCCTTGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: DTGIPPPSSNFPTPGWPHRRISD*TSLLMK
Trigger: CTTCATCAACAAGGAGGTGCAGTCGGAGATCCGCCG...ATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR GCA 90 bp ATTTCCCCAGCGTCCTCCGTACTGGGCCTGGCACGCAGTTGGCACTCAATAAATCTGGTCACTTGCTCCTaGAGCCCCTGCCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: ISPASSVLGLARSWHSINLVTCS*SPCHRC
Trigger: GCAGCGGTGGCAGGGGCTGCAGGAGCAAGTGACCAG...ATTTATTGAGTGCCAACTGCGTGCCAGGCCCAGTACGGAGGACGCTGGGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp GCCTGTAATCCCAGCTACCCGGGAGGCTTGAACTCGGGAGGTGGAGGGTGCAGTTCGGGAGGTGGAGGGTaGAGTGAGCTGAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: ACNPSYPGGLNSGGGGCSSGGGG*SELKLH
Trigger: GTGCAATTTCAGCTCACTGCACCCTCCACCTCCCGA...ACTGCACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGCTGGGATTACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CTGTCAGCATGCCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGACAGGACAGTGGGGATATaGGTCCTCACTCCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LSACPLILPGSRGHPSKDRTVGI*VLTPQP
Trigger: TGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCT...GTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp GCCTGTAATCCCAGCTACCCGGGAGGCTTGAACTCGGGAGGTGGAGGGTGCAGTATCTGTCCCCAGTCCTaGTCCTGGTCACTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ACNPSYPGGLNSGGGGCSICPQS*SWSLAP
Trigger: AGGAGCAAGTGACCAGGAGCAGGACTGGGGACAGAT...ACTGCACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGCTGGGATTACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS-3UTR CCA 90 bp ATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCCCCCAGTCCTGCTCCTaGTCACTTGCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ITLSGPSASHITISSSPLPQSCS*SLAPAA
Trigger: GGCTGCAGGAGCAAGTGACCAGGAGCAGGACTGGGG...GAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GCACTCAATAAATCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCACAGGCAGCGAGGGCCTaGTTCCACAGCGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ALNKSMLTEQTRGSRPLAQAARA*FHSARA
Trigger: GGCCCTTGCGCTGTGGAACCAGGCCCTCGCTGCCTG...TGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGATTTATTGAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp TCTCTATCTTTAGTCTCTCCACCATCCAAAGCCAAGGAGTCCTCTCTGCTGCTGCGGCGCAGGCGGCAGTaGTGCCAGCCACGGCGGATC +
Preference number: 4 (lower is better)
Translates to: SLSLVSPPSKAKESSLLLRRRRQ*CQPRRI
Trigger: GATCCGCCGTGGCTGGCACCACTGCCGCCTGCGCCG...CAGCAGCAGAGAGGACTCCTTGGCTTTGGATGGTGGAGAGACTAAAGATAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TCCCAGGTTCCAGGGGCCACCCATCTAAGGACAGTGGGGATATGCGTCCTCACTTTTCCAACTCCCGGCTaGCCTCATTCCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SQVPGATHLRTVGICVLTFPTPG*PHSQAL
Trigger: CAGGGCCTGGGAATGAGGCCAGCCGGGAGTTGGAAA...AGTGAGGACGCATATCCCCACTGTCCTTAGATGGGTGGCCCCTGGAACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR CAA 72 bp CCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTaGCCTATGCTATCGCTTCCGCCTAGAATCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PAKAERLPAQGP*PMLSLPPRILF
Trigger: GAACAGGATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp AAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTGCCCAATGCACCTGAAATaGAATCCCAACTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: KDSGDMRPHSAASSGPGCPMHLK*NPNLGA
Trigger: GGCACCCAAGTTGGGATTTCATTTCAGGTGCATTGG...GCAGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CACCTCCTTGGAGACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTTCATGTGCTCCTTCATaGAATCCTCTCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: HLLGDASQTTLGPLLASLSCAPS*NPLTST
Trigger: GGTGGAGGTGAGAGGATTTCATGAAGGAGCACATGA...AAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTCTCCAAGGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp TTCACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTCAGCAGCCCGCACAGTaGGAGCCGCAGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FTVCFPHSVVISRRAGTFQQPAQ*EPQQQL
Trigger: GAGCTGCTGCTGCGGCTCTCACTGTGCGGGCTGCTG...AAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS-3UTR GCA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTGCTCCTCGCCCAGGCTaGGGCGCAGGCGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PLLASLHNHSIACVELDVAPRPG*GAGGSG
Trigger: ACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGC...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp ACTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGTCGGGAGGTGGAGGGTaGAGTGAGCTGAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: TPAKAERLPAQGPLPMLSSGGGG*SELKLH
Trigger: GTGCAATTTCAGCTCACTGCACCCTCCACCTCCCGA...CGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp ACTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGAGGAGTCCTCTCTGCTaGTGTGTCCTCATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TPAKAERLPAQGPLPMLSRSPLC*CVLMCS
Trigger: GGAGCACATGAGGACACAGCAGCAGAGAGGACTCCT...CGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp GAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTTCCGCCTAGAATCAGGACAGTGGGGATATaGGTCCTCACTCCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ERLPAQGPLPMLSLPPRIRTVGI*VLTPQP
Trigger: TGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCT...GATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CTAAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTATGAGACTGTCAGCATaGCCCCTCATTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LRTVGICVLTPQPAVALAMRLSA*PLILPG
Trigger: ACCTGGGAGAATGAGGGGGCATGCTGACAGTCTCAT...AGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GCACTCAATAAATCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCACCTGTCTCCGCCCTCTaGAGCAGCAGCCCGCACAGT +
Preference number: 4 (lower is better)
Translates to: ALNKSMLTEQTRGSRPLAPVSAL*SSSPHS
Trigger: ACTGTGCGGGCTGCTGCTCCAGAGGGCGGAGACAGG...TGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGATTTATTGAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp TGTGTAGGGGGAGGATTTAGGGGTGAGGGTCTTGTGGGTGTATGTACAGGTGGTCCTGTCTCCGCCCTCTaGAGCAGCAGCCCGCACAGT +
Preference number: 4 (lower is better)
Translates to: CVGGGFRGEGLVGVCTGGPVSAL*SSSPHS
Trigger: ACTGTGCGGGCTGCTGCTCCAGAGGGCGGAGACAGG...ACCACCTGTACATACACCCACAAGACCCTCACCCCTAAATCCTCCCCCTACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590918.6
CDS-3UTR CCA 90 bp TCCCAGGTTCCAGGGGCCACCCATCTAAGGACAGTGGGGATATGCGTCCTCACTCCATCACTGCCACACTaGCGGAGGACGAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: SQVPGATHLRTVGICVLTPSLPH*RRTKPA
Trigger: TGCAGGTTTCGTCCTCCGCCAGTGTGGCAGTGATGG...AGTGAGGACGCATATCCCCACTGTCCTTAGATGGGTGGCCCCTGGAACCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp CTGTCAGCATGCCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGACCTCCAAAGTCCCCATTaGCCATCACTGCCACACTGG +
Preference number: 4 (lower is better)
Translates to: LSACPLILPGSRGHPSKDLQSPH*PSLPHW
Trigger: CCAGTGTGGCAGTGATGGCCAATGGGGACTTTGGAG...GTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TTCACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTCAGGCAGCGAGGGCCTaGTTCCACAGCGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: FTVCFPHSVVISRRAGTFQAARA*FHSARA
Trigger: GGCCCTTGCGCTGTGGAACCAGGCCCTCGCTGCCTG...AAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp ATTTCCCCAGCGTCCTCCGTACTGGGCCTGGCACGCAGTTGGCACTCAATAAATGCACCCACGCAGTACTaGGTCACGATCTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: ISPASSVLGLARSWHSINAPTQY*VTIWAV
Trigger: CACGGCCCAGATCGTGACCCAGTACTGCGTGGGTGC...ATTTATTGAGTGCCAACTGCGTGCCAGGCCCAGTACGGAGGACGCTGGGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTGCGCGCTCCGGGAGCTaGCGTTGCTCCTCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PLLASLHNHSIACVELDVARSGS*RCSSPR
Trigger: CCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGC...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTTCCGCCTAGAATCCTTCATACCCCTCAGTaGCCTCCATCCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ERLPAQGPLPMLSLPPRILHTPQ*PPSWSS
Trigger: GCTGGACCAGGATGGAGGCCACTGAGGGGTATGAAG...GATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp CTGTCAGCATGCCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGACGGGGTGAGGGTCTTGTaGGTGTATGTACAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LSACPLILPGSRGHPSKDGVRVL*VYVQVV
Trigger: GACCACCTGTACATACACCCACAAGACCCTCACCCC...GTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp GAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTTCCGCCTAGAATCAGCCGACAGTGTACATaGCCTGCAACCGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: ERLPAQGPLPMLSLPPRISRQCT*PATAPR
Trigger: TCTTGGAGCGGTTGCAGGTCATGTACACTGTCGGCT...GATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp TCCCAGGTTCCAGGGGCCACCCATCTAAGGACAGTGGGGATATGCGTCCTCACTAGCCCTGGAAGGAGCTaGGGAAGATCTCAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: SQVPGATHLRTVGICVLTSPGRS*GRSQSR
Trigger: TCGGCTTTGAGATCTTCCTCAGCTCCTTCCAGGGCT...AGTGAGGACGCATATCCCCACTGTCCTTAGATGGGTGGCCCCTGGAACCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CTAAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTCCAATGCACCTGAAATaGAATCCCAACTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LRTVGICVLTPQPAVALAPMHLK*NPNLGA
Trigger: GGCACCCAAGTTGGGATTTCATTTCAGGTGCATTGG...AGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCCCATTGGCCATCACTaGCACACTGGCGGAGGACGA +
Preference number: 4 (lower is better)
Translates to: QITLSGPSASHITISSSPPIGHH*HTGGGR
Trigger: TCGTCCTCCGCCAGTGTGGCAGTGATGGCCAATGGG...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp TGTGTAGGGGGAGGATTTAGGGGTGAGGGTCTTGTGGGTGTATGTACAGGTGGTCTGCTCCTGGTCACTTaGTCCTGCAGCCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CVGGGFRGEGLVGVCTGGLLLVT*SCSPCH
Trigger: GTGGCAGGGGCTGCAGGAGCAAGTGACCAGGAGCAG...ACCACCTGTACATACACCCACAAGACCCTCACCCCTAAATCCTCCCCCTACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTTTCTGCGAGGCCTGCCTTaGCTCACCTGTGCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: HGLFSPLSCHLQKGRDLFLRGLP*LTCAPV
Trigger: GACCGGAGCACAGGTGAGGCAAGGCAGGCCTCGCAG...AAAAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCTTCAGCTGCGAGGCCTaGCTTGCCTCACCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: QITLSGPSASHITISSSPFSCEA*LASPVL
Trigger: GAGCACAGGTGAGGCAAGGCAGGCCTCGCAGCTGAA...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp TCCCAGGTTCCAGGGGCCACCCATCTAAGGACAGTGGGGATATGCGTCCTCACTTATTTACAAGAGCCTTaGCCTAAGGCCCCCACCCCG +
Preference number: 4 (lower is better)
Translates to: SQVPGATHLRTVGICVLTYLQEP*PKAPTP
Trigger: CGGGGTGGGGGCCTTAGGGCAAGGCTCTTGTAAATA...AGTGAGGACGCATATCCCCACTGTCCTTAGATGGGTGGCCCCTGGAACCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590918.6
CDS-3UTR CCA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCGGGCTAGCAGCAGTGTaGCGAGAGACAGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QITLSGPSASHITISSSPGLAAV*RETGSS
Trigger: GCTACTCCCTGTCTCTCGCCACACTGCTGCTAGCCC...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp CACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTTTTCTCAAAGCCGAGCTTaGCGAAGCGCAGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: HGLFSPLSCHLQKGRDLFSQSRA*RSAGRP
Trigger: GGGGCGCCCTGCGCTTCGCCAAGCTCGGCTTTGAGA...AAAAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp CACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTTTACAGGGGCAGACGGCTaGGGAGCCGTATACACGCGG +
Preference number: 4 (lower is better)
Translates to: HGLFSPLSCHLQKGRDLFTGADG*GAVYTR
Trigger: CCGCGTGTATACGGCTCCCCAGCCGTCTGCCCCTGT...AAAAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS-3UTR TCA 90 bp CACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTTTCTCCGACTGCACCTGTaGGACGATGGCGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: HGLFSPLSCHLQKGRDLFLRLHL*DDGAQR
Trigger: CCTCTGAGCGCCATCGTCTCACAGGTGCAGTCGGAG...AAAAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS-3UTR TCA 90 bp AGCTCTCCCCAAAGTGATCTCTTTCACCTCTTTCGGGGATGGCTTAAGTGTCACGCTACCCGGGAGGCTTaGACTCGGGAGGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SSPQSDLFHLFRGWLKCHATREA*TREVEG
Trigger: ACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGC...GTGACACTTAAGCCATCCCCGAAAGAGGTGAAAGAGATCACTTTGGGGAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp GACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTCATAACCATTCCTCATGTGCTCCTTCATaGAATCCTCTCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: DASQTTLGPLLASLHNHSSCAPS*NPLTST
Trigger: GGTGGAGGTGAGAGGATTTCATGAAGGAGCACATGA...GGAATGGTTATGAAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp AGCTCTCCCCAAAGTGATCTCTTTCACCTCTTTCGGGGATGGCTTAAGTGTCACAGGCGGTTCCGCGGCTaGCAAGGTCTCCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: SSPQSDLFHLFRGWLKCHRRFRG*QGLLAL
Trigger: GAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCT...GTGACACTTAAGCCATCCCCGAAAGAGGTGAAAGAGATCACTTTGGGGAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp GAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTTCCGCCTAGAATCAGACCCCAGGGAAAATaGTCGACAACACCCATACGG +
Preference number: 4 (lower is better)
Translates to: ERLPAQGPLPMLSLPPRIRPQGK*STTPIR
Trigger: CCGTATGGGTGTTGTCGAGCATTTTCCCTGGGGTCT...GATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TTATACTTTATTTACAAGAGCCTTGCCCTAAGGCCCCCACCCCGCGAGAACCCAGCTGCCAAGGTCTCCTaGCACTCCCTGCGGTACCGT +
Preference number: 4 (lower is better)
Translates to: LYFIYKSLALRPPPRENPAAKVS*HSLRYR
Trigger: ACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGC...TGGGTTCTCGCGGGGTGGGGGCCTTAGGGCAAGGCTCTTGTAAATAAAGTATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590918.6
CDS-3UTR CCA 90 bp CTGAGAGCTCCAGACCCTTACACTCAGTGTCCTGTCATGTCCTACAAACACTGCGCAAACACCACCTCGTaGACACCCAGCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: LRAPDPYTQCPVMSYKHCANTTS*TPSRGT
Trigger: GGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTGC...GCAGTGTTTGTAGGACATGACAGGACACTGAGTGTAAGGGTCTGGAGCTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GCACTCAATAAATCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCATTTCCAACTCCCGGCTaGCCTCATTCCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ALNKSMLTEQTRGSRPLAFPTPG*PHSQAL
Trigger: CAGGGCCTGGGAATGAGGCCAGCCGGGAGTTGGAAA...TGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGATTTATTGAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp CTGAGAGCTCCAGACCCTTACACTCAGTGTCCTGTCATGTCCTACAAACACTGCCTCCGCAGCCAGCAGTaGCCCTGGCTGCTCTGGATA +
Preference number: 4 (lower is better)
Translates to: LRAPDPYTQCPVMSYKHCLRSQQ*PWLLWI
Trigger: TATCCAGAGCAGCCAGGGCCACTGCTGGCTGCGGAG...GCAGTGTTTGTAGGACATGACAGGACACTGAGTGTAAGGGTCTGGAGCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTCGATCACCCAGGGAATaGCGAAAAGCGCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLLASLHNHSIACVELDVRSPRE*RKARGP
Trigger: GGGCCCCCGCGCTTTTCGTCATTCCCTGGGTGATCG...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp GCACTCAATAAATCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCATCCACCAAATGGCCTTaGCTTCGTTGCGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ALNKSMLTEQTRGSRPLASTKWP*LRCAPS
Trigger: GCTGGGAGCGCAACGAAGTCAAGGCCATTTGGTGGA...TGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGATTTATTGAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS-3UTR TCA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCAGCCCTGGAAGGAGCTaGGGAAGATCTCAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: QITLSGPSASHITISSSPSPGRS*GRSQSR
Trigger: TCGGCTTTGAGATCTTCCTCAGCTCCTTCCAGGGCT...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CTGAGAGCTCCAGACCCTTACACTCAGTGTCCTGTCATGTCCTACAAACACTGCAGCAGTAGAGGACGCTaGCCAGGAAGCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LRAPDPYTQCPVMSYKHCSSRGR*PGSPGR
Trigger: CCTTCCAGGGCTTCCTGGTCAGCGTCCTCTACTGCT...GCAGTGTTTGTAGGACATGACAGGACACTGAGTGTAAGGGTCTGGAGCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp GAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTTCCGCCTAGAATCCAGCTCTCCCCAAAGTaGTCTCTTTCACCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: ERLPAQGPLPMLSLPPRIQLSPK*SLSPLS
Trigger: CGAAAGAGGTGAAAGAGATCACTTTGGGGAGAGCTG...GATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp ATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCCCCACCTGTTGGCTCTaGCTTAATTCTACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ITLSGPSASHITISSSPLPTCWL*LNSTPA
Trigger: GGCTGGAGTAGAATTAAGTCAGAGCCAACAGGTGGG...GAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTTTAGCTCGCCCCTCTCCTaGGAGCTCCAGACCCTTACA +
Preference number: 4 (lower is better)
Translates to: HGLFSPLSCHLQKGRDLFSSPLS*ELQTLT
Trigger: TGTAAGGGTCTGGAGCTCTCAGGAGAGGGGCGAGCT...AAAAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp TTCACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTCCCATTGGCCATCACTaGCACACTGGCGGAGGACGA +
Preference number: 4 (lower is better)
Translates to: FTVCFPHSVVISRRAGTFPIGHH*HTGGGR
Trigger: TCGTCCTCCGCCAGTGTGGCAGTGATGGCCAATGGG...AAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp AGCTCTCCCCAAAGTGATCTCTTTCACCTCTTTCGGGGATGGCTTAAGTGTCACCTGCTCCTGGTCACTTaGTCCTGCAGCCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SSPQSDLFHLFRGWLKCHLLLVT*SCSPCH
Trigger: GTGGCAGGGGCTGCAGGAGCAAGTGACCAGGAGCAG...GTGACACTTAAGCCATCCCCGAAAGAGGTGAAAGAGATCACTTTGGGGAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp ATTTCCCCAGCGTCCTCCGTACTGGGCCTGGCACGCAGTTGGCACTCAATAAATAGGAGTCCTCTCTGCTaGTGTGTCCTCATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: ISPASSVLGLARSWHSINRSPLC*CVLMCS
Trigger: GGAGCACATGAGGACACAGCAGCAGAGAGGACTCCT...ATTTATTGAGTGCCAACTGCGTGCCAGGCCCAGTACGGAGGACGCTGGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp ATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCATGAGACTGTCAGCATaGCCCCTCATTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ITLSGPSASHITISSSPLMRLSA*PLILPG
Trigger: ACCTGGGAGAATGAGGGGGCATGCTGACAGTCTCAT...GAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp AATAAATCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCAGTAACTGCTGCCAAGGTCTCCTaGCACTCCCTGCGGTACCGT +
Preference number: 4 (lower is better)
Translates to: NKSMLTEQTRGSRPLAVTAAKVS*HSLRYR
Trigger: ACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGC...AGTTACTGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGATTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GCACTCAATAAATCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCAAGGACGCACGGGCAGTaGCATTGGGTGCAGCATAGT +
Preference number: 4 (lower is better)
Translates to: ALNKSMLTEQTRGSRPLARTHGQ*HWVQHS
Trigger: ACTATGCTGCACCCAATGCCACTGCCCGTGCGTCCT...TGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGATTTATTGAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp GCACTCAATAAATCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCACCATCACTGCCACACTaGCGGAGGACGAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: ALNKSMLTEQTRGSRPLAPSLPH*RRTKPA
Trigger: TGCAGGTTTCGTCCTCCGCCAGTGTGGCAGTGATGG...TGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGATTTATTGAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp CAGACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCTTCTCACATTGTGTATaGTCTCTCCAAAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QTRGSRPLAVTFQLPAGLFSHCV*SLQSPH
Trigger: ATGGGGACTTTGGAGAGACCATACACAATGTGAGAA...GAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp CTAAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTGGCCTCATTCTTCTCTaGGTTCTCACATTGTGTATG +
Preference number: 4 (lower is better)
Translates to: LRTVGICVLTPQPAVALAGLILL*VLTLCM
Trigger: CATACACAATGTGAGAACCCAGAGAAGAATGAGGCC...AGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GCCTGTAATCCCAGCTACCCGGGAGGCTTGAACTCGGGAGGTGGAGGGTGCAGTGGCCTCATTCTTCTCTaGGTTCTCACATTGTGTATG +
Preference number: 4 (lower is better)
Translates to: ACNPSYPGGLNSGGGGCSGLILL*VLTLCM
Trigger: CATACACAATGTGAGAACCCAGAGAAGAATGAGGCC...ACTGCACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGCTGGGATTACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp CACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTTTGCAGCCACGTGTAGTTaGCACCCACGCAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: HGLFSPLSCHLQKGRDLFAATCS*HPRSTG
Trigger: CCCAGTACTGCGTGGGTGCCAACTACACGTGGCTGC...AAAAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TTCACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTGCAGCCACGTGTAGTTaGCACCCACGCAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: FTVCFPHSVVISRRAGTFAATCS*HPRSTG
Trigger: CCCAGTACTGCGTGGGTGCCAACTACACGTGGCTGC...AAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TTATACTTTATTTACAAGAGCCTTGCCCTAAGGCCCCCACCCCGCGAGAACCCATTTCCAACTCCCGGCTaGCCTCATTCCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LYFIYKSLALRPPPRENPFPTPG*PHSQAL
Trigger: CAGGGCCTGGGAATGAGGCCAGCCGGGAGTTGGAAA...TGGGTTCTCGCGGGGTGGGGGCCTTAGGGCAAGGCTCTTGTAAATAAAGTATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590918.6
CDS-3UTR CCA 90 bp ATTTCCCCAGCGTCCTCCGTACTGGGCCTGGCACGCAGTTGGCACTCAATAAATTTGAGAGACCCGTGGTaGGAGGATTGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ISPASSVLGLARSWHSINLRDPW*EDCLSP
Trigger: TGGGCTCAAGCAATCCTCCCACCACGGGTCTCTCAA...ATTTATTGAGTGCCAACTGCGTGCCAGGCCCAGTACGGAGGACGCTGGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp GCACTCAATAAATCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCAAGCCCTGGAAGGAGCTaGGGAAGATCTCAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: ALNKSMLTEQTRGSRPLASPGRS*GRSQSR
Trigger: TCGGCTTTGAGATCTTCCTCAGCTCCTTCCAGGGCT...TGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGATTTATTGAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp TCTCTATCTTTAGTCTCTCCACCATCCAAAGCCAAGGAGTCCTCTCTGCTGCTGTCCCGGCAGCGCATTTaGCGTGTCCTCAGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SLSLVSPPSKAKESSLLLSRQRI*RVLSLD
Trigger: GTCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGA...CAGCAGCAGAGAGGACTCCTTGGCTTTGGATGGTGGAGAGACTAAAGATAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp AATAAATCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCAGTAACTCACGGGCAGTGGCATTaGGTGCAGCATAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: NKSMLTEQTRGSRPLAVTHGQWH*VQHSPS
Trigger: GCTGGGACTATGCTGCACCCAATGCCACTGCCCGTG...AGTTACTGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGATTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CCA 90 bp CACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTTTAAACCTGCAGCCACATaGTGGTGCCAGGGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: HGLFSPLSCHLQKGRDLFKPAAT*WCQGRY
Trigger: GTACCTGCCCTGGCACCACCATGTGGCTGCAGGTTT...AAAAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000590918.6
CDS-3UTR CCA 90 bp TTATACTTTATTTACAAGAGCCTTGCCCTAAGGCCCCCACCCCGCGAGAACCCAAAACCTGCAGCCACATaGTGGTGCCAGGGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LYFIYKSLALRPPPRENPKPAAT*WCQGRY
Trigger: GTACCTGCCCTGGCACCACCATGTGGCTGCAGGTTT...TGGGTTCTCGCGGGGTGGGGGCCTTAGGGCAAGGCTCTTGTAAATAAAGTATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590918.6
CDS-3UTR CCA 90 bp CTAAGGACAGTGGGGATATGCGTCCTCACTCCGCAGCCAGCAGTGGCCCTGGCTTTCTCACATTGTGTATaGTCTCTCCAAAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LRTVGICVLTPQPAVALAFSHCV*SLQSPH
Trigger: ATGGGGACTTTGGAGAGACCATACACAATGTGAGAA...AGCCAGGGCCACTGCTGGCTGCGGAGTGAGGACGCATATCCCCACTGTCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GCCTGTAATCCCAGCTACCCGGGAGGCTTGAACTCGGGAGGTGGAGGGTGCAGTTTCTCACATTGTGTATaGTCTCTCCAAAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: ACNPSYPGGLNSGGGGCSFSHCV*SLQSPH
Trigger: ATGGGGACTTTGGAGAGACCATACACAATGTGAGAA...ACTGCACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGCTGGGATTACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TGTGTAGGGGGAGGATTTAGGGGTGAGGGTCTTGTGGGTGTATGTACAGGTGGTTTGAGAGACCCGTGGTaGGAGGATTGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CVGGGFRGEGLVGVCTGGLRDPW*EDCLSP
Trigger: TGGGCTCAAGCAATCCTCCCACCACGGGTCTCTCAA...ACCACCTGTACATACACCCACAAGACCCTCACCCCTAAATCCTCCCCCTACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp ACTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGAATCTCCAATGCACCTaGAATGAAATCCCAACTTGG +
Preference number: 4 (lower is better)
Translates to: TPAKAERLPAQGPLPMLSNLQCT*NEIPTW
Trigger: CCAAGTTGGGATTTCATTTCAGGTGCATTGGAGATT...CGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp AGCTCTCCCCAAAGTGATCTCTTTCACCTCTTTCGGGGATGGCTTAAGTGTCACGTAATCCCAGCACTTTaGGAGACCCGTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SSPQSDLFHLFRGWLKCHVIPAL*ETRGGR
Trigger: CCTCCCACCACGGGTCTCTCAAAGTGCTGGGATTAC...GTGACACTTAAGCCATCCCCGAAAGAGGTGAAAGAGATCACTTTGGGGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTAGCTCGCCCCTCTCCTaGGAGCTCCAGACCCTTACA +
Preference number: 4 (lower is better)
Translates to: PLLASLHNHSIACVELDVSSPLS*ELQTLT
Trigger: TGTAAGGGTCTGGAGCTCTCAGGAGAGGGGCGAGCT...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CTGAGAGCTCCAGACCCTTACACTCAGTGTCCTGTCATGTCCTACAAACACTGCTTGCGCTCCCAGCACTaGGTGTTCTCGTACAGGTAC +
Preference number: 4 (lower is better)
Translates to: LRAPDPYTQCPVMSYKHCLRSQH*VFSYRY
Trigger: GTACCTGTACGAGAACACGCAGTGCTGGGAGCGCAA...GCAGTGTTTGTAGGACATGACAGGACACTGAGTGTAAGGGTCTGGAGCTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp TTCACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTTTGCGCTCCCAGCACTaGGTGTTCTCGTACAGGTAC +
Preference number: 4 (lower is better)
Translates to: FTVCFPHSVVISRRAGTFLRSQH*VFSYRY
Trigger: GTACCTGTACGAGAACACGCAGTGCTGGGAGCGCAA...AAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp TGTGTAGGGGGAGGATTTAGGGGTGAGGGTCTTGTGGGTGTATGTACAGGTGGTAGACCCCAGGGAAAATaGTCGACAACACCCATACGG +
Preference number: 4 (lower is better)
Translates to: CVGGGFRGEGLVGVCTGGRPQGK*STTPIR
Trigger: CCGTATGGGTGTTGTCGAGCATTTTCCCTGGGGTCT...ACCACCTGTACATACACCCACAAGACCCTCACCCCTAAATCCTCCCCCTACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTTCCGCCTAGAATCAGTTCAAGACCAACCTaGGTAAGAGTGACATCCTCA +
Preference number: 4 (lower is better)
Translates to: ERLPAQGPLPMLSLPPRISSRPT*VRVTSS
Trigger: TGAGGATGTCACTCTTACCCAGGTTGGTCTTGAACT...GATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TGTGTAGGGGGAGGATTTAGGGGTGAGGGTCTTGTGGGTGTATGTACAGGTGGTACTTTGAGAGACCCGTaGTGGGAGGATTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: CVGGGFRGEGLVGVCTGGTLRDP*WEDCLS
Trigger: GCTCAAGCAATCCTCCCACCACGGGTCTCTCAAAGT...ACCACCTGTACATACACCCACAAGACCCTCACCCCTAAATCCTCCCCCTACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp AGCTCTCCCCAAAGTGATCTCTTTCACCTCTTTCGGGGATGGCTTAAGTGTCACCTTCATACCCCTCAGTaGCCTCCATCCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSPQSDLFHLFRGWLKCHLHTPQ*PPSWSS
Trigger: GCTGGACCAGGATGGAGGCCACTGAGGGGTATGAAG...GTGACACTTAAGCCATCCCCGAAAGAGGTGAAAGAGATCACTTTGGGGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp ATTTCCCCAGCGTCCTCCGTACTGGGCCTGGCACGCAGTTGGCACTCAATAAATGGGTGTATGTACAGGTaGTCCAGCCACAATGAGACT +
Preference number: 4 (lower is better)
Translates to: ISPASSVLGLARSWHSINGCMYR*SSHNET
Trigger: AGTCTCATTGTGGCTGGACCACCTGTACATACACCC...ATTTATTGAGTGCCAACTGCGTGCCAGGCCCAGTACGGAGGACGCTGGGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TTCACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTGGGGTGAGGGTCTTGTaGGTGTATGTACAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: FTVCFPHSVVISRRAGTFGVRVL*VYVQVV
Trigger: GACCACCTGTACATACACCCACAAGACCCTCACCCC...AAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR CAA 72 bp TTCTGGGCTCCAGCTTCCACCCCTGCCCCTGATAATTaGTCCTCCTACAGGGCAGACAAGAAGGATCTGTTT +
Preference number: 4 (lower is better)
Translates to: FWAPASTPAPDN*SSYRADKKDLF
Trigger: AAACAGATCCTTCTTGTCTGCCCTGTAGGAGGACAAATTATCAGGGGCAGGGGTGGAAGCTGGAGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp GAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTTCCGCCTAGAATCAATCTCCAATGCACCTaGAATGAAATCCCAACTTGG +
Preference number: 4 (lower is better)
Translates to: ERLPAQGPLPMLSLPPRINLQCT*NEIPTW
Trigger: CCAAGTTGGGATTTCATTTCAGGTGCATTGGAGATT...GATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp TCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAAACAGTGTACATGACCTaGAACCGCTCCAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: SMLTEQTRGSRPLAVTFQTVYMT*NRSKMS
Trigger: GCTCATCTTGGAGCGGTTGCAGGTCATGTACACTGT...TTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR GCA 90 bp AGCTCTCCCCAAAGTGATCTCTTTCACCTCTTTCGGGGATGGCTTAAGTGTCACCGGCGGATCTCCGACTaGACCTCCTTGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: SSPQSDLFHLFRGWLKCHRRISD*TSLLMK
Trigger: CTTCATCAACAAGGAGGTGCAGTCGGAGATCCGCCG...GTGACACTTAAGCCATCCCCGAAAGAGGTGAAAGAGATCACTTTGGGGAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTCAACTTGGGTGCCCCTaGCCACTTCTCTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PLLASLHNHSIACVELDVQLGCP*PLLCLS
Trigger: GGAGAGACAGAGAAGTGGGCAGGGGCACCCAAGTTG...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp TTCACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTAAATCCCAACTTGGGTaGCCCTGCCCACTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FTVCFPHSVVISRRAGTFKSQLG*PCPLLC
Trigger: ACAGAGAAGTGGGCAGGGGCACCCAAGTTGGGATTT...AAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CTGAGAGCTCCAGACCCTTACACTCAGTGTCCTGTCATGTCCTACAAACACTGCAAATCCCAACTTGGGTaGCCCTGCCCACTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LRAPDPYTQCPVMSYKHCKSQLG*PCPLLC
Trigger: ACAGAGAAGTGGGCAGGGGCACCCAAGTTGGGATTT...GCAGTGTTTGTAGGACATGACAGGACACTGAGTGTAAGGGTCTGGAGCTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTCCATCACTTCCCACCTaGAGTCCCCTCCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PLLASLHNHSIACVELDVPSLPT*SPLLSG
Trigger: CCCAGAAAGGAGGGGACTGCAGGTGGGAAGTGATGG...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTGCCTTGCCTCACCTGTaGTCCGGTCCACACCAAATC +
Preference number: 4 (lower is better)
Translates to: PLLASLHNHSIACVELDVALPHL*SGPHQI
Trigger: GATTTGGTGTGGACCGGAGCACAGGTGAGGCAAGGC...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp ATTTCCCCAGCGTCCTCCGTACTGGGCCTGGCACGCAGTTGGCACTCAATAAATAGCAGTGGCCCTGGCTaGTCTGGATATAAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: ISPASSVLGLARSWHSINSSGPG*SGYKVS
Trigger: TGAAACTTTATATCCAGAGCAGCCAGGGCCACTGCT...ATTTATTGAGTGCCAACTGCGTGCCAGGCCCAGTACGGAGGACGCTGGGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTCCATCACTGCCACACTaGCGGAGGACGAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: PLLASLHNHSIACVELDVPSLPH*RRTKPA
Trigger: TGCAGGTTTCGTCCTCCGCCAGTGTGGCAGTGATGG...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp GGCAGCGCATTTGCCGTGTCCTCAGCTTGGACAGGAGAATGCCAAGAATGCGGAGGCCTCATTCTTCTCTaGGTTCTCACATTGTGTATG +
Preference number: 4 (lower is better)
Translates to: GSAFAVSSAWTGECQECGGLILL*VLTLCM
Trigger: CATACACAATGTGAGAACCCAGAGAAGAATGAGGCC...TCCGCATTCTTGGCATTCTCCTGTCCAAGCTGAGGACACGGCAAATGCGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR CCA 90 bp TTATACTTTATTTACAAGAGCCTTGCCCTAAGGCCCCCACCCCGCGAGAACCCAACTTTGAGAGACCCGTaGTGGGAGGATTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LYFIYKSLALRPPPRENPTLRDP*WEDCLS
Trigger: GCTCAAGCAATCCTCCCACCACGGGTCTCTCAAAGT...TGGGTTCTCGCGGGGTGGGGGCCTTAGGGCAAGGCTCTTGTAAATAAAGTATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590918.6
CDS-3UTR GCA 90 bp CTGAGAGCTCCAGACCCTTACACTCAGTGTCCTGTCATGTCCTACAAACACTGCACAGTGTACATGACCTaGAACCGCTCCAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: LRAPDPYTQCPVMSYKHCTVYMT*NRSKMS
Trigger: GCTCATCTTGGAGCGGTTGCAGGTCATGTACACTGT...GCAGTGTTTGTAGGACATGACAGGACACTGAGTGTAAGGGTCTGGAGCTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTCGGCGGATCTCCGACTaGACCTCCTTGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: PLLASLHNHSIACVELDVRRISD*TSLLMK
Trigger: CTTCATCAACAAGGAGGTGCAGTCGGAGATCCGCCG...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TTCACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTCACCTCTTTCGGGGATaGCTTAAGTGTCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: FTVCFPHSVVISRRAGTFHLFRG*LKCHLL
Trigger: AAGGAGGTGACACTTAAGCCATCCCCGAAAGAGGTG...AAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TTCACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTGGGTGTATGTACAGGTaGTCCAGCCACAATGAGACT +
Preference number: 4 (lower is better)
Translates to: FTVCFPHSVVISRRAGTFGCMYR*SSHNET
Trigger: AGTCTCATTGTGGCTGGACCACCTGTACATACACCC...AAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp TCTCTATCTTTAGTCTCTCCACCATCCAAAGCCAAGGAGTCCTCTCTGCTGCTGACAGTGTACATGACCTaGAACCGCTCCAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: SLSLVSPPSKAKESSLLLTVYMT*NRSKMS
Trigger: GCTCATCTTGGAGCGGTTGCAGGTCATGTACACTGT...CAGCAGCAGAGAGGACTCCTTGGCTTTGGATGGTGGAGAGACTAAAGATAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp TCTCTATCTTTAGTCTCTCCACCATCCAAAGCCAAGGAGTCCTCTCTGCTGCTGCACCTCTTTCGGGGATaGCTTAAGTGTCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: SLSLVSPPSKAKESSLLLHLFRG*LKCHLL
Trigger: AAGGAGGTGACACTTAAGCCATCCCCGAAAGAGGTG...CAGCAGCAGAGAGGACTCCTTGGCTTTGGATGGTGGAGAGACTAAAGATAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR TCA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTCAGCTCTCCCCAAAGTaGTCTCTTTCACCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: PLLASLHNHSIACVELDVQLSPK*SLSPLS
Trigger: CGAAAGAGGTGAAAGAGATCACTTTGGGGAGAGCTG...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp TGTGTAGGGGGAGGATTTAGGGGTGAGGGTCTTGTGGGTGTATGTACAGGTGGTATGTCCTACAAACACTaGCAGCCTAACCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: CVGGGFRGEGLVGVCTGGMSYKH*QPNLSK
Trigger: TTTGGAAAGGTTAGGCTGGCAGTGTTTGTAGGACAT...ACCACCTGTACATACACCCACAAGACCCTCACCCCTAAATCCTCCCCCTACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp AGCTCTCCCCAAAGTGATCTCTTTCACCTCTTTCGGGGATGGCTTAAGTGTCACAGCAGTGGCCCTGGCTaGTCTGGATATAAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: SSPQSDLFHLFRGWLKCHSSGPG*SGYKVS
Trigger: TGAAACTTTATATCCAGAGCAGCCAGGGCCACTGCT...GTGACACTTAAGCCATCCCCGAAAGAGGTGAAAGAGATCACTTTGGGGAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CCA 90 bp CACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTTTAGTTCAAGACCAACCTaGGTAAGAGTGACATCCTCA +
Preference number: 4 (lower is better)
Translates to: HGLFSPLSCHLQKGRDLFSSRPT*VRVTSS
Trigger: TGAGGATGTCACTCTTACCCAGGTTGGTCTTGAACT...AAAAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR GCA 90 bp TTCACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTATGTCCTACAAACACTaGCAGCCTAACCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: FTVCFPHSVVISRRAGTFMSYKH*QPNLSK
Trigger: TTTGGAAAGGTTAGGCTGGCAGTGTTTGTAGGACAT...AAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
3UTR CAA 72 bp CATAACCATTCCATAGCGTGTGTGGAACTTGATGTTTaGTGTTCACGGTCTGTTTTCCCCACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: HNHSIACVELDV*CSRSVFPTQLS
Trigger: TGACAACTGAGTGGGGAAAACAGACCGTGAACACAAAACATCAAGTTCCACACACGCTATGGAATGGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp GGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCACTCCGGGAGCTGGCGTaGCTCCTCGCCCAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: GALRELALLLAQAAAQAALRELA*LLAQAA
Trigger: CGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAG...TGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CAA 90 bp GCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCATCTCAAAGCCGAGCTaGGCGAAGCGCAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: ARKARSGSWRCSSPRLRRISKPS*AKRRAP
Trigger: GGGCGCCCTGCGCTTCGCCAAGCTCGGCTTTGAGAT...GCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS GCA 90 bp CTGCGGCGCAGGCGGCAGTGGTGCCAGCCACGGCGGATCTCCGACTaGACCTGTGAGACGATGGCGCTCAGAGGCGGCGCCGTACCCCGC +
Preference number: 5 (lower is better)
Translates to: LRRRRQWCQPRRISD*TCETMALRGGAVPR
Trigger: GCGGGGTACGGCGCCGCCTCTGAGCGCCATCGTCTCACAGGTGCAGTCGGAGATCCGCCGTGGCTGGCACCACTGCCGCCTGCGCCGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS CCA 90 bp AGTGGTGCCAGCCACGGCGGATCTCCGACTGCACCTGTGAGACGATaGCGCTCAGAGGCGGCGCCGTACCCCGCGCTGCCGCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: SGASHGGSPTAPVRR*RSEAAPYPALPPEG
Trigger: GCCCTCTGGCGGCAGCGCGGGGTACGGCGCCGCCTCTGAGCGCCATCGTCTCACAGGTGCAGTCGGAGATCCGCCGTGGCTGGCACCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS-3UTR CAA 90 bp AGGGTCCCCGAGGACAAGCCGCGGCTGGTGGGGACCTCGCCCGGGCCGGAGCCGATGGCCTTGACTTCGTaGCGCTCCCAGCACTGCGTG +
Preference number: 5 (lower is better)
Translates to: RVPEDKPRLVGTSPGPEPMALTS*RSQHCV
Trigger: CACGCAGTGCTGGGAGCGCAACGAAGTCAAGGCCAT...CGGCTCCGGCCCGGGCGAGGTCCCCACCAGCCGCGGCTTGTCCTCGGGGACCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS-3UTR CAA 90 bp GGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGGTGCCAGATCTCAAAGCCGAGCTaGGCGAAGCGCAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: GSWRCSSPRLRRRRQWCQISKPS*AKRRAP
Trigger: GGGCGCCCTGCGCTTCGCCAAGCTCGGCTTTGAGAT...CTGGCACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS GCA 90 bp GGCCTGAAGGCGGTTCCGCGGCTGCCAAGGTCTCCTGGCACTCCCTaGGGTACCGTTCCCAGCGCTGGTACAGCTCCCCCGCCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: GLKAVPRLPRSPGTP*GTVPSAGTAPPPSA
Trigger: GGCAGACGGCGGGGGAGCTGTACCAGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCTTCAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263281.7
ENST00000585889.1
ENST00000590918.6
ENST00000591322.1
CDS-3UTR CAA 90 bp GCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGATCCCGGCAGCGCATTaGCCGTGTCCTCAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: ALRELALLLAQAAAQAAVIPAAH*PCPQLG
Trigger: TCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGAT...CACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS GCA 90 bp CCACTGAAGGCGGTTCCGCGGCTGCCAAGGTCTCCTGGCACTCCCTaGGGTACCGTTCCCAGCGCTGGTACAGCTCCCCCGCCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: PLKAVPRLPRSPGTP*GTVPSAGTAPPPSA
Trigger: GGCAGACGGCGGGGGAGCTGTACCAGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCTTCAGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304207.12
CDS CCA 90 bp CCAGCGTCACCCCGCCTCAGGGATTCACACACAGGGGCAGACGGCTaGGGAGCCGTATACACGCGGGACTCCGAGGCAGCGCACCCGCTC +
Preference number: 5 (lower is better)
Translates to: PASPRLRDSHTGADG*GAVYTRDSEAAHPL
Trigger: GAGCGGGTGCGCTGCCTCGGAGTCCCGCGTGTATACGGCTCCCCAGCCGTCTGCCCCTGTGTGTGAATCCCTGAGGCGGGGTGACGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS CCA 90 bp CTGGTACAGCTCCCCCGCCGTCTGCCCCTTAGAGCCTCCGCCCTCTaGAGCAGCAGCCCGCACAGTGAGAGCCGCAGCAGCAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LVQLPRRLPLRASAL*SSSPHSESRSSSSA
Trigger: GGCAGAGCTGCTGCTGCGGCTCTCACTGTGCGGGCTGCTGCTCCAGAGGGCGGAGGCTCTAAGGGGCAGACGGCGGGGGAGCTGTACCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS-3UTR CAA 90 bp GCCCGGAAGGCGCGCTCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCTGCCGTGTCCTCAGCTaGGACAGGAGAATGCCAAGA +
Preference number: 5 (lower is better)
Translates to: ARKARSGSWRCSSPRLRRCRVLS*DRRMPR
Trigger: TCTTGGCATTCTCCTGTCCAAGCTGAGGACACGGCA...GCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAGCGCGCCTTCCGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS GCA 90 bp AAGCTGAAGGCGGTTCCGCGGCTGCCAAGGTCTCCTGGCACTCCCTaGGGTACCGTTCCCAGCGCTGGTACAGCTCCCCCGCCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: KLKAVPRLPRSPGTP*GTVPSAGTAPPPSA
Trigger: GGCAGACGGCGGGGGAGCTGTACCAGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCTTCAGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS CCA 90 bp GCTGCCAAGGTCTCCTGGCACTCCCTGCGGTACCGTTCCCAGCGCTaGTACAGCTCCCCCGCCGTCTGCCCCTTAGAGCCTGTCTCCGCC +
Preference number: 5 (lower is better)
Translates to: AAKVSWHSLRYRSQR*YSSPAVCPLEPVSA
Trigger: GGCGGAGACAGGCTCTAAGGGGCAGACGGCGGGGGAGCTGTACCAGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263281.7
ENST00000304207.12
ENST00000585889.1
ENST00000590918.6
CDS CCA 90 bp GCTGCCAAGGTCTCCTGGCACTCCCTGCGGTACCGTTCCCAGCGCTaGTACAGCTCCCCCGCCGTCTGCCCCTTAGAGCCTCCGCCCTCT +
Preference number: 5 (lower is better)
Translates to: AAKVSWHSLRYRSQR*YSSPAVCPLEPPPS
Trigger: AGAGGGCGGAGGCTCTAAGGGGCAGACGGCGGGGGAGCTGTACCAGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS CCA 90 bp TTACAGGCGAGGCCTGAAGGCGGTTCCGCGGCTGCCAAGGTCTCCTaGCACTCCCTGCGGTACCGTTCCCAGCGCTGGTACAGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: LQARPEGGSAAAKVS*HSLRYRSQRWYSSP
Trigger: GGGGGAGCTGTACCAGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCTTCAGGCCTCGCCTGTAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263281.7
ENST00000585889.1
ENST00000590918.6
ENST00000591322.1
CDS-3UTR CAA 90 bp TCCGGGAGCTGGCGTTGCTCCTCGCCCAGGCTGCGGCGCAGGCGGCAGTGGTGCATCCACCAAATGGCCTaGACTTCGTTGCGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SGSWRCSSPRLRRRRQWCIHQMA*TSLRSQ
Trigger: CTGGGAGCGCAACGAAGTCAAGGCCATTTGGTGGAT...GCACCACTGCCGCCTGCGCCGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS-3UTR CAA 90 bp CAGCCTCAGCCGGTAATCCCGGCAGCGCATTTGCCGTGTCCTCAGCTTGGACAGCTCCGGGAGCTGGCGTaGCTCCTCGCCCAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: QPQPVIPAAHLPCPQLGQLRELA*LLAQAA
Trigger: CGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAG...CTGTCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGATTACCGGCTGAGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR CAA 90 bp GCCTGTAATCCCAGCTACCCGGGAGGCTTGAACTCGGGAGGTGGAGGGTGCAGTCTCCGGGAGCTGGCGTaGCTCCTCGCCCAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: ACNPSYPGGLNSGGGGCSLRELA*LLAQAA
Trigger: CGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAG...ACTGCACCCTCCACCTCCCGAGTTCAAGCCTCCCGGGTAGCTGGGATTACAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS GCA 90 bp GCCCTCTGGAGCAGCAGCCCGCACAGTGAGAGCCGCAGCAGCAGCTaGAGGATCGGAGAGGTAGTCATCGTGAGGGCGGCGAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: ALWSSSPHSESRSSS*RIGEVVIVRAAKGL
Trigger: CAGACCCTTCGCCGCCCTCACGATGACTACCTCTCCGATCCTGCAGCTGCTGCTGCGGCTCTCACTGTGCGGGCTGCTGCTCCAGAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263281.7
ENST00000304207.12
ENST00000585889.1
ENST00000590918.6
CDS CCA 90 bp AAACCTGCAGCCACTGAAGGCGGTTCCGCGGCTGCCAAGGTCTCCTaGCACTCCCTGCGGTACCGTTCCCAGCGCTGGTACAGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: KPAATEGGSAAAKVS*HSLRYRSQRWYSSP
Trigger: GGGGGAGCTGTACCAGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCTTCAGTGGCTGCAGGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304207.12
CDS CCA 90 bp GGAGACAGAGAAGCTGAAGGCGGTTCCGCGGCTGCCAAGGTCTCCTaGCACTCCCTGCGGTACCGTTCCCAGCGCTGGTACAGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GDREAEGGSAAAKVS*HSLRYRSQRWYSSP
Trigger: GGGGGAGCTGTACCAGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCTTCAGCTTCTCTGTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS TCA 90 bp GGGGCAGGAGGAGGTGGCAGCCCACTTCCCAGAATGGGAAATCCCTaGGGGCGGCCTGGTGGAGGCGGGACCGATCCTACCAAGATGGTC +
Preference number: 5 (lower is better)
Translates to: GAGGGGSPLPRMGNP*GRPGGGGTDPTKMV
Trigger: GACCATCTTGGTAGGATCGGTCCCGCCTCCACCAGGCCGCCCTCAGGGATTTCCCATTCTGGGAAGTGGGCTGCCACCTCCTCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591224.1
CDS-3UTR CAA 90 bp AGCGCAGGGCGCCCCGGGCCTGTTCCTCTGTCACGGGAGCAAACACCACCTCGTATCCCGGCAGCGCATTaGCCGTGTCCTCAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: SAGRPGPVPLSREQTPPRIPAAH*PCPQLG
Trigger: TCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGAT...ACGAGGTGGTGTTTGCTCCCGTGACAGAGGAACAGGCCCGGGGCGCCCTGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR CAA 90 bp CTGTCAGCATGCCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGACATCTCAAAGCCGAGCTaGGCGAAGCGCAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: LSACPLILPGSRGHPSKDISKPS*AKRRAP
Trigger: GGGCGCCCTGCGCTTCGCCAAGCTCGGCTTTGAGAT...GTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCCGGGAGCTGGCGTaGCTCCTCGCCCAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: QITLSGPSASHITISSSPLRELA*LLAQAA
Trigger: CGCAGCCTGGGCGAGGAGCAACGCCAGCTCCCGGAG...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS CCA 90 bp TGGCAGCCCACTTCCCAGAATGGGAAATCCCTGAGGGCGGCCTGGTaGAGGCGGGACCGATCCTACCAAGATGGTCATGAGGATGGGGGT +
Preference number: 5 (lower is better)
Translates to: WQPTSQNGKSLRAAW*RRDRSYQDGHEDGG
Trigger: ACCCCCATCCTCATGACCATCTTGGTAGGATCGGTCCCGCCTCCACCAGGCCGCCCTCAGGGATTTCCCATTCTGGGAAGTGGGCTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591224.1
CDS CCA 90 bp AGGTGGCAGCCCACTTCCCAGAATGGGAAATCCCTGAGGGCGGCCTaGTGGAGGCGGGACCGATCCTACCAAGATGGTCATGAGGATGGG +
Preference number: 5 (lower is better)
Translates to: RWQPTSQNGKSLRAA*WRRDRSYQDGHEDG
Trigger: CCCATCCTCATGACCATCTTGGTAGGATCGGTCCCGCCTCCACCAGGCCGCCCTCAGGGATTTCCCATTCTGGGAAGTGGGCTGCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591224.1
CDS-3UTR CAA 90 bp TCACGGGAGCAAACACCACCTCGTGGACACCCAGCAGGGGCACCAGCGTCAGCGTCTCCAAAGTCCCCATaGGCCATCACTGCCACACTG +
Preference number: 5 (lower is better)
Translates to: SREQTPPRGHPAGAPASASPKSP*AITATL
Trigger: CAGTGTGGCAGTGATGGCCAATGGGGACTTTGGAGA...CGCTGACGCTGGTGCCCCTGCTGGGTGTCCACGAGGTGGTGTTTGCTCCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS GCA 90 bp CCAGGGCAGGTACCAGGGGCAGGACGCACGGGCAGTGGCATTGGGTaGAGCATAGTCCCAGCAGACGTACATATCGAAGGACCCGTTACA +
Preference number: 5 (lower is better)
Translates to: PGQVPGAGRTGSGIG*SIVPADVHIEGPVT
Trigger: TGTAACGGGTCCTTCGATATGTACGTCTGCTGGGACTATGCTGCACCCAATGCCACTGCCCGTGCGTCCTGCCCCTGGTACCTGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000585889.1
ENST00000590918.6
CDS-3UTR CAA 90 bp CTGTCAGCATGCCCCCTCATTCTCCCAGGTTCCAGGGGCCACCCATCTAAGGACATGGCCTTGACTTCGTaGCGCTCCCAGCACTGCGTG +
Preference number: 5 (lower is better)
Translates to: LSACPLILPGSRGHPSKDMALTS*RSQHCV
Trigger: CACGCAGTGCTGGGAGCGCAACGAAGTCAAGGCCAT...GTCCTTAGATGGGTGGCCCCTGGAACCTGGGAGAATGAGGGGGCATGCTGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp ACTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGAGGCTGAGTTCAGCTTaGGGGCATGTCGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TPAKAERLPAQGPLPMLSRLSSA*GHVGPG
Trigger: CCCTGGACCGACATGCCCCAAAGCTGAACTCAGCCT...CGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp GACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATTGCCGTGTCCTCAGCTaGGACAGGAGAATGCCAAGA +
Preference number: 5 (lower is better)
Translates to: DTGIPPPSSNFPTPGWPHCRVLS*DRRMPR
Trigger: TCTTGGCATTCTCCTGTCCAAGCTGAGGACACGGCA...ATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CAA 90 bp TCCCAGGTTCCAGGGGCCACCCATCTAAGGACAGTGGGGATATGCGTCCTCACTATCCCGGCAGCGCATTaGCCGTGTCCTCAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: SQVPGATHLRTVGICVLTIPAAH*PCPQLG
Trigger: TCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGAT...AGTGAGGACGCATATCCCCACTGTCCTTAGATGGGTGGCCCCTGGAACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp TCCCAGGTTCCAGGGGCCACCCATCTAAGGACAGTGGGGATATGCGTCCTCACTAGGCTGAGTTCAGCTTaGGGGCATGTCGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: SQVPGATHLRTVGICVLTRLSSA*GHVGPG
Trigger: CCCTGGACCGACATGCCCCAAAGCTGAACTCAGCCT...AGTGAGGACGCATATCCCCACTGTCCTTAGATGGGTGGCCCCTGGAACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS TCA 90 bp CCGATCACCAAGCTCATTTGCTCGCTAGGCCCCGCCCACCGCACTTaGGACCACACACATTCTCTAAGGTCCCGCCCATTACGATCCAGG +
Preference number: 5 (lower is better)
Translates to: PITKLICSLGPAHRT*DHTHSLRSRPLRSR
Trigger: CCTGGATCGTAATGGGCGGGACCTTAGAGAATGTGTGTGGTCTCAAGTGCGGTGGGCGGGGCCTAGCGAGCAAATGAGCTTGGTGATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591224.1
CDS GCA 90 bp AAGTCCCCATTGGCCATCACTGCCACACTGGCGGAGGACGAAACCTaGAGCCACTGTAATCCCGGCTTCTGTAATCCCGGCTTCTCGGGA +
Preference number: 5 (lower is better)
Translates to: KSPLAITATLAEDET*SHCNPGFCNPGFSG
Trigger: TCCCGAGAAGCCGGGATTACAGAAGCCGGGATTACAGTGGCTGCAGGTTTCGTCCTCCGCCAGTGTGGCAGTGATGGCCAATGGGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS-3UTR CAA 90 bp GACGCCTCCCAGACCACCCTAGGCCCCCTTCTCGCTTCCCTTCATAACCATTCCATCCACCAAATGGCCTaGACTTCGTTGCGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: DASQTTLGPLLASLHNHSIHQMA*TSLRSQ
Trigger: CTGGGAGCGCAACGAAGTCAAGGCCATTTGGTGGAT...GGAATGGTTATGAAGGGAAGCGAGAAGGGGGCCTAGGGTGGTCTGGGAGGCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp ACTCCAGCCAAGGCTGAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGAGCAGGGCCGCAAGCTaGAAAAGGCTGAGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: TPAKAERLPAQGPLPMLSSRAAS*KRLSSA
Trigger: AGCTGAACTCAGCCTTTTCAAGCTTGCGGCCCTGCT...CGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTCAGCCTTGGCTGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS TCA 90 bp CAGGCTGCTAGGTCCATGTGGCCCAGAAGCGCCCCAGAGAGACTTTaGGGGTCTGTTGCGTGTTGTTCGGGAGTCTTGGGTAGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: QAARSMWPRSAPERL*GSVACCSGVLGSLE
Trigger: TTCCAAGCTACCCAAGACTCCCGAACAACACGCAACAGACCCTCAAAGTCTCTCTGGGGCGCTTCTGGGCCACATGGACCTAGCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591322.1
CDS-3UTR CAA 90 bp TCCCAGGTTCCAGGGGCCACCCATCTAAGGACAGTGGGGATATGCGTCCTCACTTCTCCAAAGTCCCCATaGGCCATCACTGCCACACTG +
Preference number: 5 (lower is better)
Translates to: SQVPGATHLRTVGICVLTSPKSP*AITATL
Trigger: CAGTGTGGCAGTGATGGCCAATGGGGACTTTGGAGA...AGTGAGGACGCATATCCCCACTGTCCTTAGATGGGTGGCCCCTGGAACCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp CTGAGAGCTCCAGACCCTTACACTCAGTGTCCTGTCATGTCCTACAAACACTGCATCTCAAAGCCGAGCTaGGCGAAGCGCAGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: LRAPDPYTQCPVMSYKHCISKPS*AKRRAP
Trigger: GGGCGCCCTGCGCTTCGCCAAGCTCGGCTTTGAGAT...GCAGTGTTTGTAGGACATGACAGGACACTGAGTGTAAGGGTCTGGAGCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS CCA 90 bp GACTTTGAGGGTCTGTTGCGTGTTGTTCGGGAGTCTTGGGTAGCTTaGAAACCAGTTCCAAGTCTTGGGGTGGGGTGCCTGGAAGCCACC +
Preference number: 5 (lower is better)
Translates to: DFEGLLRVVRESWVA*KPVPSLGVGCLEAT
Trigger: GGTGGCTTCCAGGCACCCCACCCCAAGACTTGGAACTGGTTTCCAAGCTACCCAAGACTCCCGAACAACACGCAACAGACCCTCAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591322.1
CDS-3UTR CAA 90 bp GACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAACTCCCGGCTGGCCTCATCTCTGGGTTCTCACATaGTGTATGGTCTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: DTGIPPPSSNFPTPGWPHLWVLT*CMVSPK
Trigger: CTTTGGAGAGACCATACACAATGTGAGAACCCAGAG...ATGAGGCCAGCCGGGAGTTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CAA 90 bp GAGCGCCTTCCTGCCCAAGGGCCTTTGCCTATGCTATCGCTTCCGCCTAGAATCTTAGGGGTGAGGGTCTaGTGGGTGTATGTACAGGTG +
Preference number: 5 (lower is better)
Translates to: ERLPAQGPLPMLSLPPRILGVRV*WVYVQV
Trigger: CACCTGTACATACACCCACAAGACCCTCACCCCTAA...GATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCCTTGGGCAGGAAGGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp ATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCAGCAGGGCCGCAAGCTaGAAAAGGCTGAGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: ITLSGPSASHITISSSPLSRAAS*KRLSSA
Trigger: AGCTGAACTCAGCCTTTTCAAGCTTGCGGCCCTGCT...GAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS GCA 90 bp GACCACCCCATCTTACTGGACAAACTGAGGCCGAGCTCACATCTCTaGCGCCACCACTCAGGGTTAAGGTCCCACCTGAACAAACTCAAG +
Preference number: 5 (lower is better)
Translates to: DHPILLDKLRPSSHL*RHHSGLRSHLNKLK
Trigger: CTTGAGTTTGTTCAGGTGGGACCTTAACCCTGAGTGGTGGCGGCAGAGATGTGAGCTCGGCCTCAGTTTGTCCAGTAAGATGGGGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588816.1
CDS-3UTR CAA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCTGCCGTGTCCTCAGCTaGGACAGGAGAATGCCAAGA +
Preference number: 5 (lower is better)
Translates to: QITLSGPSASHITISSSPCRVLS*DRRMPR
Trigger: TCTTGGCATTCTCCTGTCCAAGCTGAGGACACGGCA...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp ATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCTTAGGGGTGAGGGTCTaGTGGGTGTATGTACAGGTG +
Preference number: 5 (lower is better)
Translates to: ITLSGPSASHITISSSPLLGVRV*WVYVQV
Trigger: CACCTGTACATACACCCACAAGACCCTCACCCCTAA...GAGGGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp GGCAGCGCATTTGCCGTGTCCTCAGCTTGGACAGGAGAATGCCAAGAATGCGGACTCCAAGATGAGCCTTaGGTCCAGAAAGGCCTCATT +
Preference number: 5 (lower is better)
Translates to: GSAFAVSSAWTGECQECGLQDEP*VQKGLI
Trigger: AATGAGGCCTTTCTGGACCAAAGGCTCATCTTGGAG...TCCGCATTCTTGGCATTCTCCTGTCCAAGCTGAGGACACGGCAAATGCGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585889.1
CDS-3UTR CAA 90 bp CACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTTTTCTCCAAAGTCCCCATaGGCCATCACTGCCACACTG +
Preference number: 5 (lower is better)
Translates to: HGLFSPLSCHLQKGRDLFSPKSP*AITATL
Trigger: CAGTGTGGCAGTGATGGCCAATGGGGACTTTGGAGA...AAAAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp CAAATCACCCTCTCAGGACCCAGTGCCTCTCACATTACTATCTCCAGCTCGCCCCTCCAAGATGAGCCTTaGGTCCAGAAAGGCCTCATT +
Preference number: 5 (lower is better)
Translates to: QITLSGPSASHITISSSPLQDEP*VQKGLI
Trigger: AATGAGGCCTTTCTGGACCAAAGGCTCATCTTGGAG...GGGCGAGCTGGAGATAGTAATGTGAGAGGCACTGGGTCCTGAGAGGGTGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTATGGCCTTGACTTCGTaGCGCTCCCAGCACTGCGTG +
Preference number: 5 (lower is better)
Translates to: PLLASLHNHSIACVELDVMALTS*RSQHCV
Trigger: CACGCAGTGCTGGGAGCGCAACGAAGTCAAGGCCAT...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp CACGGTCTGTTTTCCCCACTCAGTTGTCATCTCCAGAAGGGCAGGGACCTTTTTATCCACCAAATGGCCTaGACTTCGTTGCGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: HGLFSPLSCHLQKGRDLFIHQMA*TSLRSQ
Trigger: CTGGGAGCGCAACGAAGTCAAGGCCATTTGGTGGAT...AAAAAGGTCCCTGCCCTTCTGGAGATGACAACTGAGTGGGGAAAACAGACCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp CTGAGAGCTCCAGACCCTTACACTCAGTGTCCTGTCATGTCCTACAAACACTGCTGCCGTGTCCTCAGCTaGGACAGGAGAATGCCAAGA +
Preference number: 5 (lower is better)
Translates to: LRAPDPYTQCPVMSYKHCCRVLS*DRRMPR
Trigger: TCTTGGCATTCTCCTGTCCAAGCTGAGGACACGGCA...GCAGTGTTTGTAGGACATGACAGGACACTGAGTGTAAGGGTCTGGAGCTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTATCCCGGCAGCGCATTaGCCGTGTCCTCAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: PLLASLHNHSIACVELDVIPAAH*PCPQLG
Trigger: TCCAAGCTGAGGACACGGCAAATGCGCTGCCGGGAT...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp AATAAATCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCAGTAACTTCTCCAAAGTCCCCATaGGCCATCACTGCCACACTG +
Preference number: 5 (lower is better)
Translates to: NKSMLTEQTRGSRPLAVTSPKSP*AITATL
Trigger: CAGTGTGGCAGTGATGGCCAATGGGGACTTTGGAGA...AGTTACTGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGATTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CAA 90 bp TCCATGCTAACTGAACAGACACGGGGATCCCGCCCCCTAGCAGTAACTTTCCAACTCCAAGATGAGCCTTaGGTCCAGAAAGGCCTCATT +
Preference number: 5 (lower is better)
Translates to: SMLTEQTRGSRPLAVTFQLQDEP*VQKGLI
Trigger: AATGAGGCCTTTCTGGACCAAAGGCTCATCTTGGAG...TTGGAAAGTTACTGCTAGGGGGCGGGATCCCCGTGTCTGTTCAGTTAGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263281.7
ENST00000585889.1
CDS-3UTR CAA 90 bp TTATACTTTATTTACAAGAGCCTTGCCCTAAGGCCCCCACCCCGCGAGAACCCACTCCAAGATGAGCCTTaGGTCCAGAAAGGCCTCATT +
Preference number: 5 (lower is better)
Translates to: LYFIYKSLALRPPPRENPLQDEP*VQKGLI
Trigger: AATGAGGCCTTTCTGGACCAAAGGCTCATCTTGGAG...TGGGTTCTCGCGGGGTGGGGGCCTTAGGGCAAGGCTCTTGTAAATAAAGTATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590918.6
CDS-3UTR CAA 90 bp TCTCTATCTTTAGTCTCTCCACCATCCAAAGCCAAGGAGTCCTCTCTGCTGCTGAAAACATTAGCCCATTaGGGCCGGGCATGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: SLSLVSPPSKAKESSLLLKTLAH*GRAWWL
Trigger: AAGCCACCATGCCCGGCCCAAATGGGCTAATGTTTT...CAGCAGCAGAGAGGACTCCTTGGCTTTGGATGGTGGAGAGACTAAAGATAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS-3UTR CAA 90 bp CCCCTTCTCGCTTCCCTTCATAACCATTCCATAGCGTGTGTGGAACTTGATGTTAAAACATTAGCCCATTaGGGCCGGGCATGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: PLLASLHNHSIACVELDVKTLAH*GRAWWL
Trigger: AAGCCACCATGCCCGGCCCAAATGGGCTAATGTTTT...AACATCAAGTTCCACACACGCTATGGAATGGTTATGAAGGGAAGCGAGAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS CCA 72 bp AGCCACGGCGGATCTCCGACTGCACCTGTGAGACGATaGCGCTCAGAGGCGGCGCCGTACCCCGCGCTGCCG +
Preference number: 6 (lower is better)
Translates to: SHGGSPTAPVRR*RSEAAPYPALP
Trigger: CGGCAGCGCGGGGTACGGCGCCGCCTCTGAGCGCCATCGTCTCACAGGTGCAGTCGGAGATCCGCCGTGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS TCA 72 bp GTGGTGCCAGCCACGGCGGATCTCCGACTGCACCTGTaGGACGATGGCGCTCAGAGGCGGCGCCGTACCCCG +
Preference number: 6 (lower is better)
Translates to: VVPATADLRLHL*DDGAQRRRRTP
Trigger: CGGGGTACGGCGCCGCCTCTGAGCGCCATCGTCTCACAGGTGCAGTCGGAGATCCGCCGTGGCTGGCACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS GCA 72 bp GCGGTTCCGCGGCTGCCAAGGTCTCCTGGCACTCCCTaGGGTACCGTTCCCAGCGCTGGTACAGCTCCCCCG +
Preference number: 6 (lower is better)
Translates to: AVPRLPRSPGTP*GTVPSAGTAPP
Trigger: CGGGGGAGCTGTACCAGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263281.7
ENST00000304207.12
ENST00000585889.1
ENST00000590918.6
ENST00000591322.1
ENST00000652180.1
CDS GCA 72 bp AGGCGGCAGTGGTGCCAGCCACGGCGGATCTCCGACTaGACCTGTGAGACGATGGCGCTCAGAGGCGGCGCC +
Preference number: 6 (lower is better)
Translates to: RRQWCQPRRISD*TCETMALRGGA
Trigger: GGCGCCGCCTCTGAGCGCCATCGTCTCACAGGTGCAGTCGGAGATCCGCCGTGGCTGGCACCACTGCCGCCT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263281.7
CDS CCA 72 bp CCCCGCCTCAGGGATTCACACACAGGGGCAGACGGCTaGGGAGCCGTATACACGCGGGACTCCGAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: PRLRDSHTGADG*GAVYTRDSEAA
Trigger: CGCTGCCTCGGAGTCCCGCGTGTATACGGCTCCCCAGCCGTCTGCCCCTGTGTGTGAATCCCTGAGGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS GCA 72 bp TGGCACCCACGCAGTACTGGGTCACGATCTGGGCCGTaGGGCAGGCAGCGAGGGCCTGGTTCCACAGCGCAA +
Preference number: 6 (lower is better)
Translates to: WHPRSTGSRSGP*GRQRGPGSTAQ
Trigger: TTGCGCTGTGGAACCAGGCCCTCGCTGCCTGCCGCACGGCCCAGATCGTGACCCAGTACTGCGTGGGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263281.7
ENST00000304207.12
ENST00000585889.1
ENST00000590918.6
ENST00000652180.1
CDS CCA 72 bp AGGCCTGAAGGCGGTTCCGCGGCTGCCAAGGTCTCCTaGCACTCCCTGCGGTACCGTTCCCAGCGCTGGTAC +
Preference number: 6 (lower is better)
Translates to: RPEGGSAAAKVS*HSLRYRSQRWY
Trigger: GTACCAGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCTTCAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263281.7
ENST00000585889.1
ENST00000590918.6
ENST00000591322.1
CDS CCA 72 bp GCCACTGAAGGCGGTTCCGCGGCTGCCAAGGTCTCCTaGCACTCCCTGCGGTACCGTTCCCAGCGCTGGTAC +
Preference number: 6 (lower is better)
Translates to: ATEGGSAAAKVS*HSLRYRSQRWY
Trigger: GTACCAGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCTTCAGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304207.12
CDS TCA 72 bp GGAGGTGGCAGCCCACTTCCCAGAATGGGAAATCCCTaGGGGCGGCCTGGTGGAGGCGGGACCGATCCTACC +
Preference number: 6 (lower is better)
Translates to: GGGSPLPRMGNP*GRPGGGGTDPT
Trigger: GGTAGGATCGGTCCCGCCTCCACCAGGCCGCCCTCAGGGATTTCCCATTCTGGGAAGTGGGCTGCCACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591224.1
CDS CCA 72 bp GAAGCTGAAGGCGGTTCCGCGGCTGCCAAGGTCTCCTaGCACTCCCTGCGGTACCGTTCCCAGCGCTGGTAC +
Preference number: 6 (lower is better)
Translates to: EAEGGSAAAKVS*HSLRYRSQRWY
Trigger: GTACCAGCGCTGGGAACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGCCGCGGAACCGCCTTCAGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS GCA 72 bp CCAGTCCTGCTCCTGGTCACTTGCTCCTGCAGCCCCTaGCACCGCTGCCTCCAACTGCCTTGTCTCGGCTCT +
Preference number: 6 (lower is better)
Translates to: PVLLLVTCSCSP*HRCLQLPCLGS
Trigger: AGAGCCGAGACAAGGCAGTTGGAGGCAGCGGTGGCAGGGGCTGCAGGAGCAAGTGACCAGGAGCAGGACTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590918.6
ENST00000652180.1
CDS CCA 72 bp GCCAGGGCAGGTACCAGGGGCAGGACGCACGGGCAGTaGCATTGGGTGCAGCATAGTCCCAGCAGACGTACA +
Preference number: 6 (lower is better)
Translates to: ARAGTRGRTHGQ*HWVQHSPSRRT
Trigger: TGTACGTCTGCTGGGACTATGCTGCACCCAATGCCACTGCCCGTGCGTCCTGCCCCTGGTACCTGCCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000585889.1
ENST00000590918.6
CDS CCA 72 bp GCAGGTACCAGGGGCAGGACGCACGGGCAGTGGCATTaGGTGCAGCATAGTCCCAGCAGACGTACATATCGA +
Preference number: 6 (lower is better)
Translates to: AGTRGRTHGQWH*VQHSPSRRTYR
Trigger: TCGATATGTACGTCTGCTGGGACTATGCTGCACCCAATGCCACTGCCCGTGCGTCCTGCCCCTGGTACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263281.7
ENST00000585889.1
ENST00000590918.6
CDS CCA 72 bp CCCACTTCCCAGAATGGGAAATCCCTGAGGGCGGCCTaGTGGAGGCGGGACCGATCCTACCAAGATGGTCAT +
Preference number: 6 (lower is better)
Translates to: PTSQNGKSLRAA*WRRDRSYQDGH
Trigger: ATGACCATCTTGGTAGGATCGGTCCCGCCTCCACCAGGCCGCCCTCAGGGATTTCCCATTCTGGGAAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591224.1
CDS GCA 72 bp TTGGCCATCACTGCCACACTGGCGGAGGACGAAACCTaGAGCCACTGTAATCCCGGCTTCTGTAATCCCGGC +
Preference number: 6 (lower is better)
Translates to: LAITATLAEDET*SHCNPGFCNPG
Trigger: GCCGGGATTACAGAAGCCGGGATTACAGTGGCTGCAGGTTTCGTCCTCCGCCAGTGTGGCAGTGATGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652180.1
CDS CCA 72 bp ACTTCCCAGAATGGGAAATCCCTGAGGGCGGCCTGGTaGAGGCGGGACCGATCCTACCAAGATGGTCATGAG +
Preference number: 6 (lower is better)
Translates to: TSQNGKSLRAAW*RRDRSYQDGHE
Trigger: CTCATGACCATCTTGGTAGGATCGGTCCCGCCTCCACCAGGCCGCCCTCAGGGATTTCCCATTCTGGGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591224.1
CDS CAA 72 bp ATGAGGATGGGGGTCCGTATAATCCACCAAATGGCCTaGACTTCGTTGCGCTCCCAGCACCTGGGGAAGGCG +
Preference number: 6 (lower is better)
Translates to: MRMGVRIIHQMA*TSLRSQHLGKA
Trigger: CGCCTTCCCCAGGTGCTGGGAGCGCAACGAAGTCAAGGCCATTTGGTGGATTATACGGACCCCCATCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591224.1
CDS CAA 90 bp GGTCCATGTGGCCCAGAAGCGCCCCAGAGAGACTTTGAGGGTCTGTaGCGTGTTGTTCGGGAGTCTTGGGTAGCTTGGAAACCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: GPCGPEAPQRDFEGL*RVVRESWVAWKPVP
Trigger: TGGAACTGGTTTCCAAGCTACCCAAGACTCCCGAACAACACGCAACAGACCCTCAAAGTCTCTCTGGGGCGCTTCTGGGCCACATGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591322.1
CDS TCA 72 bp TGGTGGAAACAGACCACCCCATCTTACTGGACAAACTaGGGCCGAGCTCACATCTCTGCCGCCACCACTCAG +
Preference number: 6 (lower is better)
Translates to: WWKQTTPSYWTN*GRAHISAATTQ
Trigger: CTGAGTGGTGGCGGCAGAGATGTGAGCTCGGCCTCAGTTTGTCCAGTAAGATGGGGTGGTCTGTTTCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588816.1
CDS TCA 72 bp AAGCTCATTTGCTCGCTAGGCCCCGCCCACCGCACTTaGGACCACACACATTCTCTAAGGTCCCGCCCATTA +
Preference number: 6 (lower is better)
Translates to: KLICSLGPAHRT*DHTHSLRSRPL
Trigger: TAATGGGCGGGACCTTAGAGAATGTGTGTGGTCTCAAGTGCGGTGGGCGGGGCCTAGCGAGCAAATGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591224.1
CDS GCA 72 bp GTAGCTTGGAAACCAGTTCCAAGTCTTGGGGTGGGGTaGCTGGAAGCCACCCACTGGAGTTGCTATGGGAGA +
Preference number: 6 (lower is better)
Translates to: VAWKPVPSLGVG*LEATHWSCYGR
Trigger: TCTCCCATAGCAACTCCAGTGGGTGGCTTCCAGGCACCCCACCCCAAGACTTGGAACTGGTTTCCAAGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591322.1
CDS CCA 72 bp GGTCTGTTGCGTGTTGTTCGGGAGTCTTGGGTAGCTTaGAAACCAGTTCCAAGTCTTGGGGTGGGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: GLLRVVRESWVA*KPVPSLGVGCL
Trigger: CAGGCACCCCACCCCAAGACTTGGAACTGGTTTCCAAGCTACCCAAGACTCCCGAACAACACGCAACAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591322.1
CDS CAA 72 bp GGGTCTGTTGCGTGTTGTTCGGGAGTCTTGGGTAGCTaGGAAACCAGTTCCAAGTCTTGGGGTGGGGTGCCT +
Preference number: 6 (lower is better)
Translates to: GSVACCSGVLGS*ETSSKSWGGVP
Trigger: AGGCACCCCACCCCAAGACTTGGAACTGGTTTCCAAGCTACCCAAGACTCCCGAACAACACGCAACAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591322.1
CDS CAA 72 bp GGCCCAGAAGCGCCCCAGAGAGACTTTGAGGGTCTGTaGCGTGTTGTTCGGGAGTCTTGGGTAGCTTGGAAA +
Preference number: 6 (lower is better)
Translates to: GPEAPQRDFEGL*RVVRESWVAWK
Trigger: TTTCCAAGCTACCCAAGACTCCCGAACAACACGCAACAGACCCTCAAAGTCTCTCTGGGGCGCTTCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591322.1
CDS CAA 90 bp CTTCTCTGGGTTCTCACATTGTGTATGGTCTCTCCAAAGTCCCCATaGGCCATCACTGCCACACTGGCGGAGGACGAAACCTGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: LLWVLTLCMVSPKSP*AITATLAEDETCSH
Trigger: GTGGCTGCAGGTTTCGTCCTCCGCCAGTGTGGCAGTGATGGCCAATGGGGACTTTGGAGAGACCATACACAATGTGAGAACCCAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263281.7
ENST00000304207.12
ENST00000585889.1
ENST00000588816.1
ENST00000590918.6
ENST00000652180.1
CDS GCA 72 bp ATCTTACTGGACAAACTGAGGCCGAGCTCACATCTCTaGCGCCACCACTCAGGGTTAAGGTCCCACCTGAAC +
Preference number: 6 (lower is better)
Translates to: ILLDKLRPSSHL*RHHSGLRSHLN
Trigger: GTTCAGGTGGGACCTTAACCCTGAGTGGTGGCGGCAGAGATGTGAGCTCGGCCTCAGTTTGTCCAGTAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588816.1
CDS CAA 72 bp GGGGTCCGTATAATCCACCAAATGGCCTTGACTTCGTaGCGCTCCCAGCACTGCGTGTTCTCGTACAGGTAC +
Preference number: 6 (lower is better)
Translates to: GVRIIHQMALTS*RSQHCVFSYRY
Trigger: GTACCTGTACGAGAACACGCAGTGCTGGGAGCGCAACGAAGTCAAGGCCATTTGGTGGATTATACGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263281.7
ENST00000304207.12
ENST00000590918.6
ENST00000652180.1
CDS CAA 72 bp ATGAGGATGGGGGTCCGTATAATCCACCAAATGGCCTaGACTTCGTTGCGCTCCCAGCACTGCGTGTTCTCG +
Preference number: 6 (lower is better)
Translates to: MRMGVRIIHQMA*TSLRSQHCVFS
Trigger: CGAGAACACGCAGTGCTGGGAGCGCAACGAAGTCAAGGCCATTTGGTGGATTATACGGACCCCCATCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263281.7
ENST00000304207.12
ENST00000590918.6
ENST00000652180.1
CDS CCA 72 bp CTGCTCCCCATAGAACCACCAGTGGATAGCTGGACCTaGTGGAAACAGACCACCCCATCTTACTGGACAAAC +
Preference number: 6 (lower is better)
Translates to: LLPIEPPVDSWT*WKQTTPSYWTN
Trigger: GTTTGTCCAGTAAGATGGGGTGGTCTGTTTCCACCAGGTCCAGCTATCCACTGGTGGTTCTATGGGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588816.1
CDS CAA 72 bp GTTCTCACATTGTGTATGGTCTCTCCAAAGTCCCCATaGGCCATCACTGCCACACTGGCGGAGGACGAAACC +
Preference number: 6 (lower is better)
Translates to: VLTLCMVSPKSP*AITATLAEDET
Trigger: GGTTTCGTCCTCCGCCAGTGTGGCAGTGATGGCCAATGGGGACTTTGGAGAGACCATACACAATGTGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263281.7
ENST00000304207.12
ENST00000585889.1
ENST00000588816.1
ENST00000590918.6
ENST00000652180.1
CDS CAA 90 bp AAGATGGTCATGAGGATGGGGGTCCGTATAATCCACCAAATGGCCTaGACTTCGTTGCGCTCCCAGCACTGCGTGTTCTCGTACAGGTAC +
Preference number: 6 (lower is better)
Translates to: KMVMRMGVRIIHQMA*TSLRSQHCVFSYRY
Trigger: GTACCTGTACGAGAACACGCAGTGCTGGGAGCGCAACGAAGTCAAGGCCATTTGGTGGATTATACGGACCCCCATCCTCATGACCATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263281.7
ENST00000304207.12
ENST00000590918.6
ENST00000652180.1
CDS CCA 72 bp GACTTTGAGGGTCTGTTGCGTGTTGTTCGGGAGTCTTaGGTAGCTTGGAAACCAGTTCCAAGTCTTGGGGTG +
Preference number: 6 (lower is better)
Translates to: DFEGLLRVVRES*VAWKPVPSLGV
Trigger: CACCCCAAGACTTGGAACTGGTTTCCAAGCTACCCAAGACTCCCGAACAACACGCAACAGACCCTCAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591322.1
CDS CCA 72 bp GATGAGCCTTTGGTCCAGAAAGGCCTCATTCTTCTCTaGGTTCTCACATTGTGTATGGTCTCTCCAAAGTCC +
Preference number: 6 (lower is better)
Translates to: DEPLVQKGLILL*VLTLCMVSPKS
Trigger: GGACTTTGGAGAGACCATACACAATGTGAGAACCCAGAGAAGAATGAGGCCTTTCTGGACCAAAGGCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263281.7
ENST00000304207.12
ENST00000585889.1
ENST00000588816.1
ENST00000590918.6
ENST00000652180.1