RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GIPC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000179855

Ensembl transcript IDs: ENST00000644452.3, ENST00000644946.1

Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTaGTGCTTCTGGGGGCCCCAGGCTGGAAGGGACAGGAGAGGACGA +
Preference number: 1 (lower is better)
Translates to: HRTLPTTACWRNKVT*CFWGPQAGRDRRGR
Trigger: TCGTCCTCTCCTGTCCCTTCCAGCCTGGGGCCCCCAGAAGCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp GACTGGGCTGCAGGATGGGGATGGGCACTTGGATGCAACTGGGGTTaGGATCTGGACTGGGCAGCCGTGTGGACCTGGGTTTCTGAGCTG +
Preference number: 1 (lower is better)
Translates to: DWAAGWGWALGCNWG*DLDWAAVWTWVSEL
Trigger: CAGCTCAGAAACCCAGGTCCACACGGCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCCAAGTGCCCATCCCCATCCTGCAGCCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR GCA 90 bp CGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTaGTTCTGGGGGCCCCAGGCTGGAAGGGACAGGAGAGGACGAGAA +
Preference number: 1 (lower is better)
Translates to: RTLPTTACWRNKVTC*FWGPQAGRDRRGRE
Trigger: TTCTCGTCCTCTCCTGTCCCTTCCAGCCTGGGGCCCCCAGAAGCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp CTGCAGGATGGGGATGGGCACTTGGATGCAACTGGGGTTGGGATCTaGACTGGGCAGCCGTGTGGACCTGGGTTTCTGAGCTGGTCTGAG +
Preference number: 1 (lower is better)
Translates to: LQDGDGHLDATGVGI*TGQPCGPGFLSWSE
Trigger: CTCAGACCAGCTCAGAAACCCAGGTCCACACGGCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCCAAGTGCCCATCCCCATCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp GAGCTGGAATCATCACTGGAGCTGGACTGGGCTGCAGGATGGGGATaGGCACTTGGATGCAACTGGGGTTGGGATCTGGACTGGGCAGCC +
Preference number: 1 (lower is better)
Translates to: ELESSLELDWAAGWG*ALGCNWGWDLDWAA
Trigger: GGCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCCAAGTGCCCATCCCCATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp CAGGGTTTTAGAGGCGAATTGAGTCCCAGAGGCTGGTCGAGCTCCTaGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGA +
Preference number: 1 (lower is better)
Translates to: QGFRGELSPRGWSSS*AALGPGAGPAVGTR
Trigger: TCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCAGGAGCTCGACCAGCCTCTGGGACTCAATTCGCCTCTAAAACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp GAGCTGGGCTCAGTCTCAGAGCTGGAATCATCACTGGAGCTGGACTaGGCTGCAGGATGGGGATGGGCACTTGGATGCAACTGGGGTTGG +
Preference number: 1 (lower is better)
Translates to: ELGSVSELESSLELD*AAGWGWALGCNWGW
Trigger: CCAACCCCAGTTGCATCCAAGTGCCCATCCCCATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGCCCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp CTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCTTCTaGGGGCCCCAGGCTGGAAGGGACAGGAGAGGACGAGAACCACAT +
Preference number: 1 (lower is better)
Translates to: LPTTACWRNKVTCCF*GPQAGRDRRGREPH
Trigger: ATGTGGTTCTCGTCCTCTCCTGTCCCTTCCAGCCTGGGGCCCCCAGAAGCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR GCA 90 bp GGGCTCAGTCTCAGAGCTGGAATCATCACTGGAGCTGGACTGGGCTaGAGGATGGGGATGGGCACTTGGATGCAACTGGGGTTGGGATCT +
Preference number: 1 (lower is better)
Translates to: GLSLRAGIITGAGLG*RMGMGTWMQLGLGS
Trigger: AGATCCCAACCCCAGTTGCATCCAAGTGCCCATCCCCATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp GTCTCAGAGCTGGAATCATCACTGGAGCTGGACTGGGCTGCAGGATaGGGATGGGCACTTGGATGCAACTGGGGTTGGGATCTGGACTGG +
Preference number: 1 (lower is better)
Translates to: VSELESSLELDWAAG*GWALGCNWGWDLDW
Trigger: CCAGTCCAGATCCCAACCCCAGTTGCATCCAAGTGCCCATCCCCATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp GCTGCATTGTGCAAGGAGAGTGGGGCTTGGCACCAAGCTGTGTGCTaGAGCTGGGTCTTGCTTCCAAGATGGATGGGGTTCCAGAGCTGG +
Preference number: 1 (lower is better)
Translates to: AALCKESGAWHQAVC*SWVLLPRWMGFQSW
Trigger: CCAGCTCTGGAACCCCATCCATCTTGGAAGCAAGACCCAGCTCCAGCACACAGCTTGGTGCCAAGCCCCACTCTCCTTGCACAATGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp GGCACCAAGCTGTGTGCTGGAGCTGGGTCTTGCTTCCAAGATGGATaGGGTTCCAGAGCTGGTCTGAATCCTGGAGTTGGGCCTGGTTGT +
Preference number: 1 (lower is better)
Translates to: GTKLCAGAGSCFQDG*GSRAGLNPGVGPGC
Trigger: ACAACCAGGCCCAACTCCAGGATTCAGACCAGCTCTGGAACCCCATCCATCTTGGAAGCAAGACCCAGCTCCAGCACACAGCTTGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp ACCAGAGCTGTCTGGGGCTGTGGTCTGGAGCTGGTATCTAGAACCTaGCAGGGTTTTAGAGGCGAATTGAGTCCCAGAGGCTGGTCGAGC +
Preference number: 1 (lower is better)
Translates to: TRAVWGCGLELVSRT*QGFRGELSPRGWSS
Trigger: GCTCGACCAGCCTCTGGGACTCAATTCGCCTCTAAAACCCTGCCAGGTTCTAGATACCAGCTCCAGACCACAGCCCCAGACAGCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR GCA 90 bp ATGGAAGGTGCCTTTATTCACCATGAGCCCTCAGGGTACATGCGGTaGAACCCGTCTCCTGCCCTCCTTTTCCCTCCAAGGACCTGGATC +
Preference number: 1 (lower is better)
Translates to: MEGAFIHHEPSGYMR*NPSPALLFPPRTWI
Trigger: GATCCAGGTCCTTGGAGGGAAAAGGAGGGCAGGAGACGGGTTGCACCGCATGTACCCTGAGGGCTCATGGTGAATAAAGGCACCTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR GCA 90 bp CAGAGATGGAAGGTGCCTTTATTCACCATGAGCCCTCAGGGTACATaGGGTGCAACCCGTCTCCTGCCCTCCTTTTCCCTCCAAGGACCT +
Preference number: 1 (lower is better)
Translates to: QRWKVPLFTMSPQGT*GATRLLPSFSLQGP
Trigger: AGGTCCTTGGAGGGAAAAGGAGGGCAGGAGACGGGTTGCACCGCATGTACCCTGAGGGCTCATGGTGAATAAAGGCACCTTCCATCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp TCCAGAGCTGGGTGCGGTGCTTGGGCTGGATTGAGCTCTGGAGCTTaGCCAGGCCTTGAAATTGGTCTGGGTCCTGGAAGTAAACTGCAT +
Preference number: 1 (lower is better)
Translates to: SRAGCGAWAGLSSGA*PGLEIGLGPGSKLH
Trigger: ATGCAGTTTACTTCCAGGACCCAGACCAATTTCAAGGCCTGGCCAAGCTCCAGAGCTCAATCCAGCCCAAGCACCGCACCCAGCTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR TCA 90 bp GAGCTGGGTCTTGCTTCCAAGATGGATGGGGTTCCAGAGCTGGTCTaGATCCTGGAGTTGGGCCTGGTTGTAGCACTAGGCGAGGTTCTA +
Preference number: 1 (lower is better)
Translates to: ELGLASKMDGVPELV*ILELGLVVALGEVL
Trigger: TAGAACCTCGCCTAGTGCTACAACCAGGCCCAACTCCAGGATTCAGACCAGCTCTGGAACCCCATCCATCTTGGAAGCAAGACCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp GAGAAGGGTTGGGTTCTGGAGTTGGGCTGGGGCTCCAAATTGGATTaGGTTCTAGAGAGGAACTTGTCCTCCGATCTGGGCTGGGTTCTG +
Preference number: 1 (lower is better)
Translates to: EKGWVLELGWGSKLD*VLERNLSSDLGWVL
Trigger: CAGAACCCAGCCCAGATCGGAGGACAAGTTCCTCTCTAGAACCCAATCCAATTTGGAGCCCCAGCCCAACTCCAGAACCCAACCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp TCCAAAATTAACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTaGCTGCATCGTGGAGCTGTCCAGAGTTCCAGAGTCAGCTTGAGT +
Preference number: 1 (lower is better)
Translates to: SKINWGSGARPSVQV*LHRGAVQSSRVSLS
Trigger: ACTCAAGCTGACTCTGGAACTCTGGACAGCTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR GCA 90 bp GAGCTTGGCCAGGCCTTGAAATTGGTCTGGGTCCTGGAAGTAAACTaGATTCTAGAGCTGAGCTGCATTGTGCAAGGAGAGTGGGGCTTG +
Preference number: 1 (lower is better)
Translates to: ELGQALKLVWVLEVN*ILELSCIVQGEWGL
Trigger: CAAGCCCCACTCTCCTTGCACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTCAAGGCCTGGCCAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp GATCTGGGCTGGATTCTAGAGAAGGGTTGGGTTCTGGAGTTGGGCTaGGGCTCCAAATTGGATTGGGTTCTAGAGAGGAACTTGTCCTCC +
Preference number: 1 (lower is better)
Translates to: DLGWILEKGWVLELG*GSKLDWVLERNLSS
Trigger: GGAGGACAAGTTCCTCTCTAGAACCCAATCCAATTTGGAGCCCCAGCCCAACTCCAGAACCCAACCCTTCTCTAGAATCCAGCCCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp GCACATAGCTTGGCCTCAGATCTGGGCTGGATTCTAGAGAAGGGTTaGGTTCTGGAGTTGGGCTGGGGCTCCAAATTGGATTGGGTTCTA +
Preference number: 1 (lower is better)
Translates to: AHSLASDLGWILEKG*VLELGWGSKLDWVL
Trigger: TAGAACCCAATCCAATTTGGAGCCCCAGCCCAACTCCAGAACCCAACCCTTCTCTAGAATCCAGCCCAGATCTGAGGCCAAGCTATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp AGAGCTGGGCTGCTTCATGAATCTCACATGGGTTCCAAAATTAACTaGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTGCATCGT +
Preference number: 1 (lower is better)
Translates to: RAGLLHESHMGSKIN*GSGARPSVQVWLHR
Trigger: ACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCAGCCCAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR GCA 90 bp AAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTaGATTGTGCAAGGAGAGTGGGGCTTGGCACCAAGCTGTGTGCTG +
Preference number: 1 (lower is better)
Translates to: KLVWVLEVNCILELS*IVQGEWGLAPSCVL
Trigger: CAGCACACAGCTTGGTGCCAAGCCCCACTCTCCTTGCACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp GAACTAGACAGGGCTGTGGAGCTTAATTCTATTGCTGCGATGGCCTaGGTCCCAGGACTAGATTGGACTCCAGAGCTTAGCTGGATTCTG +
Preference number: 1 (lower is better)
Translates to: ELDRAVELNSIAAMA*VPGLDWTPELSWIL
Trigger: CAGAATCCAGCTAAGCTCTGGAGTCCAATCTAGTCCTGGGACCCAGGCCATCGCAGCAATAGAATTAAGCTCCACAGCCCTGTCTAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp CTCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTaGCTTGTTGTCAGGGCTCAGCTGGATTCTAGAGATGTGCTTCGT +
Preference number: 1 (lower is better)
Translates to: LQAGLGLKMCLGSRV*LVVRAQLDSRDVLR
Trigger: ACGAAGCACATCTCTAGAATCCAGCTGAGCCCTGACAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 90 bp GAACTGGGATTGGTCTCCAAGCTGGTCTGGGTCTTAAAATGTGTCTaGGTTCCAGAGTTTGGCTTGTTGTCAGGGCTCAGCTGGATTCTA +
Preference number: 1 (lower is better)
Translates to: ELGLVSKLVWVLKCV*VPEFGLLSGLSWIL
Trigger: TAGAATCCAGCTGAGCCCTGACAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGAGACCAATCCCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGGTGGGGTGGACTTCTaGGGTCCCACCCGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHGGVDF*GPTRGL
Trigger: CAAGCCCCGGGTGGGACCCCAGAAGTCCACCCCACC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR GCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGGAACTCAGGAGGGCTaGCCTAGGGGCAGGACTAGG +
Preference number: 2 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHGTQEG*PRGRTR
Trigger: CCTAGTCCTGCCCCTAGGGCAGCCCTCCTGAGTTCC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR TCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGTGCTTGGGCTGGATTaGGCTCTGGAGCTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLVLGLD*ALELGQ
Trigger: CTGGCCAAGCTCCAGAGCTCAATCCAGCCCAAGCAC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTATCTGGGCTGGGTTCTaGAGCAGGGCCGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSIWAGF*SRAGAG
Trigger: CCCTGCCCCGGCCCTGCTCCAGAACCCAGCCCAGAT...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGGATGCAACTGGGGTTaGGATCTGGACTGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHGCNWG*DLDWAA
Trigger: GGCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCAGTGGGGCAAAGGGCTaGCGCCAAAGCTGGGGACTC +
Preference number: 2 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCSGAKG*RQSWGL
Trigger: GAGTCCCCAGCTTTGGCGCCAGCCCTTTGCCCCACT...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR GCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCCAGAGCTGGGTGCGGTaGTTGGGCTGGATTGAGCTC +
Preference number: 2 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCQSWVR*LGWIEL
Trigger: GAGCTCAATCCAGCCCAAGCACCGCACCCAGCTCTG...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTGTCTTGCTTCCAAGATaGATGGGGTTCCAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCVLLPR*MGFQSW
Trigger: CCAGCTCTGGAACCCCATCCATCTTGGAAGCAAGAC...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCGAGACGGCTGGCTTCTaGGGGGTTGAGGAGACCTGT +
Preference number: 2 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCETAGF*GVEETC
Trigger: ACAGGTCTCCTCAACCCCCCAGAAGCCAGCCGTCTC...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR TCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCGTTCCAGAGCTGGTCTaGATCCTGGAGTTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCVPELV*ILELGL
Trigger: CAGGCCCAACTCCAGGATTCAGACCAGCTCTGGAAC...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR TCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCAGCTTGGCCAGGCCTTaGAATTGGTCTGGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCSLARP*NWSGSW
Trigger: CCAGGACCCAGACCAATTTCAAGGCCTGGCCAAGCT...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TTAACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTGCATCGTGGAGAGAAGGGTTGGGTTCTaGAGTTGGGCTGGGGCTCCA +
Preference number: 2 (lower is better)
Translates to: LTGVPELDRVSRCGCIVERRVGF*SWAGAP
Trigger: TGGAGCCCCAGCCCAACTCCAGAACCCAACCCTTCT...CTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTATTCTAGAGAAGGGTTaGGTTCTGGAGTTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCILEKG*VLELGW
Trigger: CCAGCCCAACTCCAGAACCCAACCCTTCTCTAGAAT...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGTCTCAGAGCTGGCCTaGGCTCTAGCACATAGCTTG +
Preference number: 2 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLVSELA*ALAHSL
Trigger: CAAGCTATGTGCTAGAGCCCAGGCCAGCTCTGAGAC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCGCTGCAGGATGGGGATaGGCACTTGGATGCAACTGG +
Preference number: 2 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCAAGWG*ALGCNW
Trigger: CCAGTTGCATCCAAGTGCCCATCCCCATCCTGCAGC...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGCTGTGTGCTGGAGCTaGGTCTTGCTTCCAAGATGG +
Preference number: 2 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHAVCWS*VLLPRW
Trigger: CCATCTTGGAAGCAAGACCCAGCTCCAGCACACAGC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCGCTGAGTTCCAGAGCTaGGTGCGGTGCTTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCAEFQS*VRCLGW
Trigger: CCAGCCCAAGCACCGCACCCAGCTCTGGAACTCAGC...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACATTGCTGCGATGGCCTaGGTCCCAGGACTAGATTGG +
Preference number: 2 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHIAAMA*VPGLDW
Trigger: CCAATCTAGTCCTGGGACCCAGGCCATCGCAGCAAT...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR GCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCGGATGGGCACTTGGATaGAACTGGGGTTGGGATCTG +
Preference number: 2 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCGWALG*NWGWDL
Trigger: CAGATCCCAACCCCAGTTGCATCCAAGTGCCCATCC...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TGGGCTCAGTCTCAGAGCTGGAATCATCACTGGAGCTGGACTGGGCTGCAGGATACTTGTCCTCCGATCTaGGCTGGGTTCTGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: WAQSQSWNHHWSWTGLQDTCPPI*AGFWSR
Trigger: CCTGCTCCAGAACCCAGCCCAGATCGGAGGACAAGT...ATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGCCTCAGATCTGGGCTaGATTCTAGAGAAGGGTTGG +
Preference number: 2 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLASDLG*ILEKGW
Trigger: CCAACCCTTCTCTAGAATCCAGCCCAGATCTGAGGC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTCTGGGTTCCAGAGTTTaGCTTGTTGTCAGGGCTCAG +
Preference number: 2 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLLGSRV*LVVRAQ
Trigger: CTGAGCCCTGACAACAAGCCAAACTCTGGAACCCAG...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGTCTCCGAGCTAGCCTaGATTCTGGAACTGGGATTG +
Preference number: 2 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHVSELA*ILELGL
Trigger: CAATCCCAGTTCCAGAATCCAGGCTAGCTCGGAGAC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCATATGGTGGGTGGGGTaGACTTCTGGGGTCCCACCC +
Preference number: 2 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCIWWVG*TSGVPP
Trigger: GGGTGGGACCCCAGAAGTCCACCCCACCCACCATAT...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR GCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTTTCAGAACCAGCCTGTaGTCCAGAACTGAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLFRTSL*SRTELS
Trigger: ACTCAGCTCAGTTCTGGAGCACAGGCTGGTTCTGAA...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TTAACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTGCATCGTGGAGTTCTGGAACTGGGATTaGTCTCCAAGCTGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: LTGVPELDRVSRCGCIVEFWNWD*SPSWSG
Trigger: CCCAGACCAGCTTGGAGACCAATCCCAGTTCCAGAA...CTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCATTCTTGCAGTGGTCTaGGTCCCGGAGCTGAGCTGG +
Preference number: 2 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCILAVV*VPELSW
Trigger: CCAGCTCAGCTCCGGGACCCAGACCACTGCAAGAAT...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR TCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTCTTCCAGAGCTGGCTTaGATTCTTGAGCTTATCTGG +
Preference number: 2 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLLPELA*ILELIW
Trigger: CCAGATAAGCTCAAGAATTCAAGCCAGCTCTGGAAG...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR GCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGTCCTGGAAGTAAACTaGATTCTAGAGCTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLVLEVN*ILELSC
Trigger: GCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGAC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR GCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCCAAGGCTGGCCTGGATaGCACATACCTGATCATGGG +
Preference number: 2 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCQGWPG*HIPDHG
Trigger: CCCATGATCAGGTATGTGGCATCCAGGCCAGCCTTG...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGTCTCCAAGCTGGTCTaGGTCTTAAAATGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLVSKLV*VLKCVW
Trigger: CCAGACACATTTTAAGACCCAGACCAGCTTGGAGAC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTATGGGGATGGGCACTTaGATGCAACTGGGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSMGMGT*MQLGLG
Trigger: TCCCAACCCCAGTTGCATCCAAGTGCCCATCCCCAT...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTAATCATCACTGGAGCTaGACTGGGCTGCAGGATGGG +
Preference number: 2 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSNHHWS*TGLQDG
Trigger: CCCATCCTGCAGCCCAGTCCAGCTCCAGTGATGATT...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCGCTGTGGTCTGGAGCTaGTATCTAGAACCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCAVVWS*YLEPGR
Trigger: CCTGCCAGGTTCTAGATACCAGCTCCAGACCACAGC...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CAA 90 bp AGAGAAGGGTTGGGTTCTGGAGTTGGGCTGGGGCTCCAAATTGGATaGGGTTCTAGAGAGGAACTTGTCCTCCGATCTGGGCTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: REGLGSGVGLGLQIG*GSREELVLRSGLGS
Trigger: AGAACCCAGCCCAGATCGGAGGACAAGTTCCTCTCTAGAACCCAATCCAATTTGGAGCCCCAGCCCAACTCCAGAACCCAACCCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACTCCTCCGATCTGGGCTaGGTTCTGGAGCAGGGCCGG +
Preference number: 2 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDSSDLG*VLEQGR
Trigger: CCGGCCCTGCTCCAGAACCCAGCCCAGATCGGAGGA...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCCCTGGGTTTCTGAGCTaGTCTGAGTTCTTGAATAGG +
Preference number: 2 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCPGFLS*SEFLNR
Trigger: CCTATTCAAGAACTCAGACCAGCTCAGAAACCCAGG...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCATGGGGTTCCAGAGCTaGTCTGAATCCTGGAGTTGG +
Preference number: 2 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCMGFQS*SESWSW
Trigger: CCAACTCCAGGATTCAGACCAGCTCTGGAACCCCAT...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CAA 90 bp ATTCTAGAGAAGGGTTGGGTTCTGGAGTTGGGCTGGGGCTCCAAATaGGATTGGGTTCTAGAGAGGAACTTGTCCTCCGATCTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: ILEKGWVLELGWGSK*DWVLERNLSSDLGW
Trigger: CCAGCCCAGATCGGAGGACAAGTTCCTCTCTAGAACCCAATCCAATTTGGAGCCCCAGCCCAACTCCAGAACCCAACCCTTCTCTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CAA 90 bp GCCTCAGATCTGGGCTGGATTCTAGAGAAGGGTTGGGTTCTGGAGTaGGGCTGGGGCTCCAAATTGGATTGGGTTCTAGAGAGGAACTTG +
Preference number: 2 (lower is better)
Translates to: ASDLGWILEKGWVLE*GWGSKLDWVLERNL
Trigger: CAAGTTCCTCTCTAGAACCCAATCCAATTTGGAGCCCCAGCCCAACTCCAGAACCCAACCCTTCTCTAGAATCCAGCCCAGATCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR TCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTGCTGGCTTGAATTCTTaGGCTTATCTGGGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSAGLNS*AYLGPR
Trigger: TCTGGGACCCAGATAAGCTCAAGAATTCAAGCCAGC...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACGTTCTGGAGTTGGGCTaGGGCTCCAAATTGGATTGG +
Preference number: 2 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNVLELG*GSKLDW
Trigger: CCAATCCAATTTGGAGCCCCAGCCCAACTCCAGAAC...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCCTTCAGAGCAGGGCTTaGTCTCAGATCTTATCTGGG +
Preference number: 2 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCLQSRA*SQILSG
Trigger: CCCAGATAAGATCTGAGACCAAGCCCTGCTCTGAAG...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTGGTTCCAAAATTAACTaGGGTTCCGGAGCTAGACCG +
Preference number: 2 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSGSKIN*GSGARP
Trigger: CGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACC...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGTTTTGGAGCTGGCTaGGATTTCAGAACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCCFGAG*DFRTSL
Trigger: CAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACA...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR TCA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACGCTTCAGATGTGGCCTaGATTCTAGAACACGGCTTG +
Preference number: 2 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNASDVA*ILEHGL
Trigger: CAAGCCGTGTTCTAGAATTCAGGCCACATCTGAAGC...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR GCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCAGAGCTTATTCTCAATaGTGGGCTTGGTCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCRAYSQ*WAWSQS
Trigger: GCTCTGAGACCAAGCCCAGCATTGAGAATAAGCTCT...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTACTGGGGTTGGGATCTaGACTGGGCAGCCGTGTGGA +
Preference number: 2 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCTGVGI*TGQPCG
Trigger: TCCACACGGCTGCCCAGTCCAGATCCCAACCCCAGT...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGACTGGGCTGCAGGATaGGGATGGGCACTTGGATGC +
Preference number: 2 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCDWAAG*GWALGC
Trigger: GCATCCAAGTGCCCATCCCCATCCTGCAGCCCAGTC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACGCCTTGAAATTGGTCTaGGTCCTGGAAGTAAACTGC +
Preference number: 2 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNALKLV*VLEVNC
Trigger: GCAGTTTACTTCCAGGACCCAGACCAATTTCAAGGC...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CAA 90 bp CTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTaGTCAGGGCTCAGCTGGATTCTAGAGATGTGCTTCGTCTCAGAG +
Preference number: 2 (lower is better)
Translates to: LVWVLKCVWVPEFGL*SGLSWILEMCFVSE
Trigger: CTCTGAGACGAAGCACATCTCTAGAATCCAGCTGAGCCCTGACAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CAA 90 bp AAAGCTAAGCTGACTTTCAGAACTGCTCTGCTTCCCAAAGTCCAGTaGAATACCAGAGCTGTCTGGGGCTGTGGTCTGGAGCTGGTATCT +
Preference number: 2 (lower is better)
Translates to: KAKLTFRTALLPKVQ*NTRAVWGCGLELVS
Trigger: AGATACCAGCTCCAGACCACAGCCCCAGACAGCTCTGGTATTCAACTGGACTTTGGGAAGCAGAGCAGTTCTGAAAGTCAGCTTAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CAA 90 bp AAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTaGTTGTCAGGGCTCAGCTGGATTCTAGAGATGTGCTTCGTCTCA +
Preference number: 2 (lower is better)
Translates to: KLVWVLKCVWVPEFG*LSGLSWILEMCFVS
Trigger: TGAGACGAAGCACATCTCTAGAATCCAGCTGAGCCCTGACAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR GCA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGTGGATTCTAGAGATGTaGTTCGTCTCAGAGCTGGCC +
Preference number: 2 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLWILEM*FVSELA
Trigger: GGCCAGCTCTGAGACGAAGCACATCTCTAGAATCCA...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACGTCTTAAAATGTGTCTaGGTTCCAGAGTTTGGCTTG +
Preference number: 2 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDVLKCV*VPEFGL
Trigger: CAAGCCAAACTCTGGAACCCAGACACATTTTAAGAC...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp CTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTCTaGGGTCCCACCCGGGGCTTGGGAGAGACGGCTGGC +
Preference number: 3 (lower is better)
Translates to: LGVTDMVGGVDF*GPTRGLGETAG
Trigger: GCCAGCCGTCTCTCCCAAGCCCCGGGTGGGACCCCAGAAGTCCACCCCACCCACCATATCTGTCACTCCTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp TGGGCTGCAGGATGGGGATGGGCACTTGGATGCAACTaGGGTTGGGATCTGGACTGGGCAGCCGTGTGGACC +
Preference number: 3 (lower is better)
Translates to: WAAGWGWALGCN*GWDLDWAAVWT
Trigger: GGTCCACACGGCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCCAAGTGCCCATCCCCATCCTGCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp GTGGGGCCAGGTAGGAGGCTTGGGGTAAGCCTGGGATaGGGCCAAGGCTGGCCTGGATGCCACATACCTGAT +
Preference number: 3 (lower is better)
Translates to: VGPGRRLGVSLG*GQGWPGCHIPD
Trigger: ATCAGGTATGTGGCATCCAGGCCAGCCTTGGCCCCATCCCAGGCTTACCCCAAGCCTCCTACCTGGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp CAAAGGGCTGGCGCCAAAGCTGGGGACTCAGACAGCTaGGAACTCAGGAGGGCTGCCCTAGGGGCAGGACTA +
Preference number: 3 (lower is better)
Translates to: QRAGAKAGDSDS*ELRRAALGAGL
Trigger: TAGTCCTGCCCCTAGGGCAGCCCTCCTGAGTTCCCAGCTGTCTGAGTCCCCAGCTTTGGCGCCAGCCCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp GGGGATGGGCACTTGGATGCAACTGGGGTTGGGATCTaGACTGGGCAGCCGTGTGGACCTGGGTTTCTGAGC +
Preference number: 3 (lower is better)
Translates to: GDGHLDATGVGI*TGQPCGPGFLS
Trigger: GCTCAGAAACCCAGGTCCACACGGCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCCAAGTGCCCATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp GCAGGATGGGGATGGGCACTTGGATGCAACTGGGGTTaGGATCTGGACTGGGCAGCCGTGTGGACCTGGGTT +
Preference number: 3 (lower is better)
Translates to: AGWGWALGCNWG*DLDWAAVWTWV
Trigger: AACCCAGGTCCACACGGCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCCAAGTGCCCATCCCCATCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTGGCTGGGGCTCCAAATaGGATTGGGTTCTAGAGAGG +
Preference number: 3 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCGWGSK*DWVLER
Trigger: CCTCTCTAGAACCCAATCCAATTTGGAGCCCCAGCC...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACTGGATGCAACTGGGGTaGGGATCTGGACTGGGCAGC +
Preference number: 3 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHWMQLG*GSGLGS
Trigger: GCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCCA...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGATGGGGATGGGCACTaGGATGCAACTGGGGTTGGG +
Preference number: 3 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHDGDGH*DATGVG
Trigger: CCCAACCCCAGTTGCATCCAAGTGCCCATCCCCATC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACCAAGGAGAGTGGGGCTaGGCACCAAGCTGTGTGCTG +
Preference number: 3 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHQGEWG*APSCVL
Trigger: CAGCACACAGCTTGGTGCCAAGCCCCACTCTCCTTG...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR GCA 72 bp GGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTaGATCGTGGAGCTGTCCAGAGTTCCAGAGTCAGCT +
Preference number: 3 (lower is better)
Translates to: GVPELDRVSRCG*IVELSRVPESA
Trigger: AGCTGACTCTGGAACTCTGGACAGCTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp TGGGCACTTGGATGCAACTGGGGTTGGGATCTGGACTaGGCAGCCGTGTGGACCTGGGTTTCTGAGCTGGTC +
Preference number: 3 (lower is better)
Translates to: WALGCNWGWDLD*AAVWTWVSELV
Trigger: GACCAGCTCAGAAACCCAGGTCCACACGGCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCCAAGTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGGTTCTGGAACTAAGTaGGGCTCCAGAGTCGGGCTG +
Preference number: 3 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHGSGTK*GSRVGL
Trigger: CAGCCCGACTCTGGAGCCCAACTTAGTTCCAGAACC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR GCA 72 bp CTCAGAGCTGGAATCATCACTGGAGCTGGACTGGGCTaGAGGATGGGGATGGGCACTTGGATGCAACTGGGG +
Preference number: 3 (lower is better)
Translates to: LRAGIITGAGLG*RMGMGTWMQLG
Trigger: CCCCAGTTGCATCCAAGTGCCCATCCCCATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR GCA 72 bp AGCTGGGGACTCAGACAGCTGGGAACTCAGGAGGGCTaGCCTAGGGGCAGGACTAGGAGTGACAGATATGGT +
Preference number: 3 (lower is better)
Translates to: SWGLRQLGTQEG*PRGRTRSDRYG
Trigger: ACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCCCTCCTGAGTTCCCAGCTGTCTGAGTCCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp AACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTaGCTGCATCGTGGAGCTGTCCAGAGTTCCAGAGTC +
Preference number: 3 (lower is better)
Translates to: NWGSGARPSVQV*LHRGAVQSSRV
Trigger: GACTCTGGAACTCTGGACAGCTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp GGGTGCGGTGCTTGGGCTGGATTGAGCTCTGGAGCTTaGCCAGGCCTTGAAATTGGTCTGGGTCCTGGAAGT +
Preference number: 3 (lower is better)
Translates to: GCGAWAGLSSGA*PGLEIGLGPGS
Trigger: ACTTCCAGGACCCAGACCAATTTCAAGGCCTGGCCAAGCTCCAGAGCTCAATCCAGCCCAAGCACCGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGTTCTAGAGAGGAACTaGTCCTCCGATCTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHVLERN*SSDLGW
Trigger: CCAGCCCAGATCGGAGGACAAGTTCCTCTCTAGAAC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TGGGCTCAGTCTCAGAGCTGGAATCATCACTGGAGCTGGACTGGGCTGCAGGATGTTTTCCAGCAGGGCTaGGTCTCCGAGCTAGCCTGG +
Preference number: 3 (lower is better)
Translates to: WAQSQSWNHHWSWTGLQDVFQQG*VSELAW
Trigger: CCAGGCTAGCTCGGAGACCAAGCCCTGCTGGAAAAC...ATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TGGGCTCAGTCTCAGAGCTGGAATCATCACTGGAGCTGGACTGGGCTGCAGGATGGTTGGGTTCTGGAGTaGGGCTGGGGCTCCAAATTG +
Preference number: 3 (lower is better)
Translates to: WAQSQSWNHHWSWTGLQDGWVLE*GWGSKL
Trigger: CAATTTGGAGCCCCAGCCCAACTCCAGAACCCAACC...ATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACATTCTGGAACTGGGATaGGTCTCCAAGCTGGTCTGG +
Preference number: 3 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHILELG*VSKLVW
Trigger: CCAGACCAGCTTGGAGACCAATCCCAGTTCCAGAAT...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTGGTGCTTGGGCTGGATaGAGCTCTGGAGCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSGAWAG*SSGAWP
Trigger: TGGCCAAGCTCCAGAGCTCAATCCAGCCCAAGCACC...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR GCA 72 bp CCCTGTTTTCACCACCGCACACTCCCTACCACCGCCTaGTGGAGAAATAAGGTCACTTGCTGCTTCTGGGGG +
Preference number: 3 (lower is better)
Translates to: PCFHHRTLPTTA*WRNKVTCCFWG
Trigger: CCCCCAGAAGCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAAACAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR GCA 72 bp GCCTTTATTCACCATGAGCCCTCAGGGTACATGCGGTaGAACCCGTCTCCTGCCCTCCTTTTCCCTCCAAGG +
Preference number: 3 (lower is better)
Translates to: AFIHHEPSGYMR*NPSPALLFPPR
Trigger: CCTTGGAGGGAAAAGGAGGGCAGGAGACGGGTTGCACCGCATGTACCCTGAGGGCTCATGGTGAATAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp CTGGAATCATCACTGGAGCTGGACTGGGCTGCAGGATaGGGATGGGCACTTGGATGCAACTGGGGTTGGGAT +
Preference number: 3 (lower is better)
Translates to: LESSLELDWAAG*GWALGCNWGWD
Trigger: ATCCCAACCCCAGTTGCATCCAAGTGCCCATCCCCATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TGGGCTCAGTCTCAGAGCTGGAATCATCACTGGAGCTGGACTGGGCTGCAGGATGTTCCAGAGTTTGGCTaGTTGTCAGGGCTCAGCTGG +
Preference number: 3 (lower is better)
Translates to: WAQSQSWNHHWSWTGLQDVPEFG*LSGLSW
Trigger: CCAGCTGAGCCCTGACAACAAGCCAAACTCTGGAAC...ATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp CTGTGTGCTGGAGCTGGGTCTTGCTTCCAAGATGGATaGGGTTCCAGAGCTGGTCTGAATCCTGGAGTTGGG +
Preference number: 3 (lower is better)
Translates to: LCAGAGSCFQDG*GSRAGLNPGVG
Trigger: CCCAACTCCAGGATTCAGACCAGCTCTGGAACCCCATCCATCTTGGAAGCAAGACCCAGCTCCAGCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp GTCTGGGGCTGTGGTCTGGAGCTGGTATCTAGAACCTaGCAGGGTTTTAGAGGCGAATTGAGTCCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: VWGCGLELVSRT*QGFRGELSPRG
Trigger: GCCTCTGGGACTCAATTCGCCTCTAAAACCCTGCCAGGTTCTAGATACCAGCTCCAGACCACAGCCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACGCTCTAGCACATAGCTaGGCCTCAGATCTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNALAHS*ASDLGW
Trigger: CCAGCCCAGATCTGAGGCCAAGCTATGTGCTAGAGC...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCGGTTTTAGAGGCGAATaGAGTCCCAGAGGCTGGTCG +
Preference number: 3 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCGFRGE*SPRGWS
Trigger: CGACCAGCCTCTGGGACTCAATTCGCCTCTAAAACC...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp TGGGCTCTAGCACATAGCTTGGCCTCAGATCTGGGCTaGATTCTAGAGAAGGGTTGGGTTCTGGAGTTGGGC +
Preference number: 3 (lower is better)
Translates to: WALAHSLASDLG*ILEKGWVLELG
Trigger: GCCCAACTCCAGAACCCAACCCTTCTCTAGAATCCAGCCCAGATCTGAGGCCAAGCTATGTGCTAGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp CTCAAGCTGGATTCTAGGGTCAAGGCCAGGGGTCTGTaGGCAGATTCCATTTCCAGGGCTCAGCCAGATTCT +
Preference number: 3 (lower is better)
Translates to: LKLDSRVKARGL*ADSISRAQPDS
Trigger: AGAATCTGGCTGAGCCCTGGAAATGGAATCTGCCCACAGACCCCTGGCCTTGACCCTAGAATCCAGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACGGCCAGGCCTTGAAATaGGTCTGGGTCCTGGAAGTA +
Preference number: 3 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNGQALK*VWVLEV
Trigger: TACTTCCAGGACCCAGACCAATTTCAAGGCCTGGCC...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp TTGGCCTCAGATCTGGGCTGGATTCTAGAGAAGGGTTaGGTTCTGGAGTTGGGCTGGGGCTCCAAATTGGAT +
Preference number: 3 (lower is better)
Translates to: LASDLGWILEKG*VLELGWGSKLD
Trigger: ATCCAATTTGGAGCCCCAGCCCAACTCCAGAACCCAACCCTTCTCTAGAATCCAGCCCAGATCTGAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp AGGGCTGTGGAGCTTAATTCTATTGCTGCGATGGCCTaGGTCCCAGGACTAGATTGGACTCCAGAGCTTAGC +
Preference number: 3 (lower is better)
Translates to: RAVELNSIAAMA*VPGLDWTPELS
Trigger: GCTAAGCTCTGGAGTCCAATCTAGTCCTGGGACCCAGGCCATCGCAGCAATAGAATTAAGCTCCACAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACTCTGGGTTCCAGAGTTaGGCTTGTTGTCAGGGCTCA +
Preference number: 3 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNSGFQS*ACCQGS
Trigger: TGAGCCCTGACAACAAGCCAAACTCTGGAACCCAGA...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCAGTTCCAGAGTCAGCTaGAGTTTTCCAGCAGGGCTT +
Preference number: 3 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCSSRVS*SFPAGL
Trigger: AAGCCCTGCTGGAAAACTCAAGCTGACTCTGGAACT...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCAGTTCTGGAACTGGATaGGGTTCCAGAAACAGGCTG +
Preference number: 3 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCSSGTG*GSRNRL
Trigger: CAGCCTGTTTCTGGAACCCAATCCAGTTCCAGAACT...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp CTGCTTCATGAATCTCACATGGGTTCCAAAATTAACTaGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGG +
Preference number: 3 (lower is better)
Translates to: LLHESHMGSKIN*GSGARPSVQVW
Trigger: CCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGGATTCTAGAGAAGGGTaGGGTTCTGGAGTTGGGCTG +
Preference number: 3 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLDSREG*GSGVGL
Trigger: CAGCCCAACTCCAGAACCCAACCCTTCTCTAGAATC...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR GCA 72 bp CAGGCCTTGAAATTGGTCTGGGTCCTGGAAGTAAACTaGATTCTAGAGCTGAGCTGCATTGTGCAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: QALKLVWVLEVN*ILELSCIVQGE
Trigger: CTCTCCTTGCACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTCAAGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp TGGATTCTGGAACTGGGATTGGTCTCCAAGCTGGTCTaGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGC +
Preference number: 3 (lower is better)
Translates to: WILELGLVSKLV*VLKCVWVPEFG
Trigger: GCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGAGACCAATCCCAGTTCCAGAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CCA 72 bp GGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTaGCTTGTTGTCAGGGCTCAGCTGGATTCTAGAGAT +
Preference number: 3 (lower is better)
Translates to: GLGLKMCLGSRV*LVVRAQLDSRD
Trigger: ATCTCTAGAATCCAGCTGAGCCCTGACAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGGGGCTCCAAATTGGATaGGGTTCTAGAGAGGAACTT +
Preference number: 3 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLGLQIG*GSREEL
Trigger: AAGTTCCTCTCTAGAACCCAATCCAATTTGGAGCCC...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR-3UTR CAA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTATTCTAGAACACGGCTaGGTCTCTATGCTGGGCTTG +
Preference number: 3 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCILEHG*VSMLGL
Trigger: CAAGCCCAGCATAGAGACCAAGCCGTGTTCTAGAAT...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTCCCGTGGGGCTCCCGTaGGCCAGCTGCGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCPVGLP*ASCVRK
Trigger: CTTCCGCACGCAGCTGGCGCACGGGAGCCCCACGGG...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGGCCTCCCGGGCCGCTaGTCCCTCCATGGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHGLPGR*SLHGGR
Trigger: TCTCCCGCCATGGAGGGAGCAGCGGCCCGGGAGGCC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTCTCCCGTGCGCCAGCTaGGTGCGGAAGACGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLLPCAS*VRKTRR
Trigger: GCGCCTCGTCTTCCGCACGCAGCTGGCGCACGGGAG...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTTCCTCCGATCTGGGCTaGGTTCTGGAGCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCSSDLG*VLEQGR
Trigger: CCGGCCCTGCTCCAGAACCCAGCCCAGATCGGAGGA...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTTTGAGTCCCAGAGGCTaGTCGAGCTCCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCLSPRG*SSSWAA
Trigger: CGCTGCCCAGGAGCTCGACCAGCCTCTGGGACTCAA...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACTCTGGGGGATGGGCCTaGGGGCTGAGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHSGGWA*GLRLGW
Trigger: CCAGCCCAACCTCAGCCCCCAGGCCCATCCCCCAGA...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACCTGGCTCCCCCAGAGTaGGGCAAAGGGCTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHLAPPE*GKGLAP
Trigger: TGGCGCCAGCCCTTTGCCCCACTCTGGGGGAGCCAG...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGTAAGGGCGGGCTCCTaGCTCCCCCAGAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLVRAGS*LPQSGA
Trigger: TGCCCCACTCTGGGGGAGCCAGGAGCCCGCCCTTAC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTGTCACTTGCTGCTTCTaGGGGCCCCAGGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCVTCCF*GPQAGR
Trigger: CCTTCCAGCCTGGGGCCCCCAGAAGCAGCAAGTGAC...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCGGATCCGCCGCTTCCTaGAGCCTCCCCTCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCGSAAS*SLPSPG
Trigger: GCCGGGGGAGGGGAGGCTGCAGGAAGCGGCGGATCC...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGCTCCCGGAGCATCTTaGCCACCTCGTAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHAPGAS*PPRSGG
Trigger: GCCGCCACTACGAGGTGGCCAAGATGCTCCGGGAGC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGGGGTAAGCCTGGGATaGGGCCAAGGCTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHGVSLG*GQGWPG
Trigger: TCCAGGCCAGCCTTGGCCCCATCCCAGGCTTACCCC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTGAGACGGCTGGCTTCTaGGGGGTTGAGGAGACCTGT +
Preference number: 4 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCETAGF*GVEETC
Trigger: ACAGGTCTCCTCAACCCCCCAGAAGCCAGCCGTCTC...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGGGCTCAGTCTCAGAGCTGGAATCATCACTGGAGCTGGACTGGGCTGCAGGATCGCAGGGTGAAGGGCTaGGACTTGGGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: WAQSQSWNHHWSWTGLQDRRVKG*DLGSSR
Trigger: CCGGGAGCTGCCCAAGTCCCAGCCCTTCACCCTGCG...ATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGGGCTCAGTCTCAGAGCTGGAATCATCACTGGAGCTGGACTGGGCTGCAGGATATCTGGGCTGGGTTCTaGAGCAGGGCCGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WAQSQSWNHHWSWTGLQDIWAGF*SRAGAG
Trigger: CCCTGCCCCGGCCCTGCTCCAGAACCCAGCCCAGAT...ATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGGTTGGGATCTGGACTaGGCAGCCGTGTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLGWDLD*AAVWTW
Trigger: CCAGGTCCACACGGCTGCCCAGTCCAGATCCCAACC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTTGGACGTCTCCACCATaGTGGACGCCAGCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLWTSPP*WTPARG
Trigger: ACCCCGAGCTGGCGTCCACCATGGTGGAGACGTCCA...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CAA 72 bp TGCAGGATGGGGATGGGCACTTGGATGCAACTGGGGTaGGGATCTGGACTGGGCAGCCGTGTGGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: CRMGMGTWMQLG*GSGLGSRVDLG
Trigger: ACCCAGGTCCACACGGCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCCAAGTGCCCATCCCCATCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTACTGAGCCTCAGAGCTaGGCCTGGTCTCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLTEPQS*AWSQDW
Trigger: CCAGTCCTGAGACCAGGCTCAGCTCTGAGGCTCAGT...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTAGCCCTCAGGGTACATaGGGTGCAACCCGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLSPQGT*GATRLL
Trigger: CAGGAGACGGGTTGCACCGCATGTACCCTGAGGGCT...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCTATCGAAGGCCCTCTTaGGCTGCACCAGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCYRRPS*AAPGAG
Trigger: CCCTGCGCCTGGTGCAGCCCAAGAGGGCCTTCGATA...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGGGTCTCCCTCCCGCTaGTCACTTTCGCCTCTACTG +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLGSPSR*SLSPLL
Trigger: CAGTAGAGGCGAAAGTGACCAGCGGGAGGGAGACCC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGGGCTCAGTCTCAGAGCTGGAATCATCACTGGAGCTGGACTGGGCTGCAGGATCTCTGGCCTCGCCGATaGCGGCCCACACTTCCACCA +
Preference number: 4 (lower is better)
Translates to: WAQSQSWNHHWSWTGLQDLWPRR*RPTLPP
Trigger: TGGTGGAAGTGTGGGCCGCCATCGGCGAGGCCAGAG...ATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTAGCTGGAATCATCACTaGAGCTGGACTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCSWNHH*SWTGLQ
Trigger: CTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCT...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCGCTGAGTTCCAGAGCTaGGTGCGGTGCTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCAEFQS*VRCLGW
Trigger: CCAGCCCAAGCACCGCACCCAGCTCTGGAACTCAGC...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTATATGGTGGGTGGGGTaGACTTCTGGGGTCCCACCC +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLIWWVG*TSGVPP
Trigger: GGGTGGGACCCCAGAAGTCCACCCCACCCACCATAT...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTGTTTTAGAGGCGAATTaGGTCCCAGAGGCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCVLEAN*VPEAGR
Trigger: TCGACCAGCCTCTGGGACTCAATTCGCCTCTAAAAC...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCGGATGCAACTGGGGTTaGGATCTGGACTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCGCNWG*DLDWAA
Trigger: GGCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCC...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCTCACTGGAGCTGGACTaGGCTGCAGGATGGGGATGG +
Preference number: 4 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCSLELD*AAGWGW
Trigger: CCATCCCCATCCTGCAGCCCAGTCCAGCTCCAGTGA...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTATTGTGCAAGGAGAGTaGGGCTTGGCACCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCIVQGE*GLAPSC
Trigger: ACAGCTTGGTGCCAAGCCCCACTCTCCTTGCACAAT...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTGTCCCACCCGGGGCTTaGGAGAGACGGCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSVPPGA*ERRLAS
Trigger: AGAAGCCAGCCGTCTCTCCCAAGCCCCGGGTGGGAC...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTCCGCTGCTCCCTCCATaGCGGGAGAAGTTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSPLLPP*REKFGH
Trigger: GTGGCCGAACTTCTCCCGCCATGGAGGGAGCAGCGG...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTACGTCTCCACCATGGTaGACGCCAGCTCGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSTSPPW*TPARGP
Trigger: GGGACCCCGAGCTGGCGTCCACCATGGTGGAGACGT...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp TTAACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTGCATCGTGGAGGTTCCAGAGCTGGTCTaGATCCTGGAGTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LTGVPELDRVSRCGCIVEVPELV*ILELGL
Trigger: CAGGCCCAACTCCAGGATTCAGACCAGCTCTGGAAC...CTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGCTGAGCTGAATTCTTaGAGTGGTCTGGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLAELNS*SGLGPG
Trigger: TCCGGGACCCAGACCACTGCAAGAATTCAGCTCAGC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACCAAGGCTGGCCTGGATaGCACATACCTGATCATGGG +
Preference number: 4 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHQGWPG*HIPDHG
Trigger: CCCATGATCAGGTATGTGGCATCCAGGCCAGCCTTG...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGGGCTCAGTCTCAGAGCTGGAATCATCACTGGAGCTGGACTGGGCTGCAGGATACTGGGGTTGGGATCTaGACTGGGCAGCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: WAQSQSWNHHWSWTGLQDTGVGI*TGQPCG
Trigger: TCCACACGGCTGCCCAGTCCAGATCCCAACCCCAGT...ATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTATTGCTGCGATGGCCTaGGTCCCAGGACTAGATTGG +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLIAAMA*VPGLDW
Trigger: CCAATCTAGTCCTGGGACCCAGGCCATCGCAGCAAT...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTAACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTGCATCGTGGAGATTCTTGCAGTGGTCTaGGTCCCGGAGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTGVPELDRVSRCGCIVEILAVV*VPELSW
Trigger: CCAGCTCAGCTCCGGGACCCAGACCACTGCAAGAAT...CTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTGGGGACTCAGACAGCTaGGAACTCAGGAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSGDSDS*ELRRAA
Trigger: GGCAGCCCTCCTGAGTTCCCAGCTGTCTGAGTCCCC...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTAGGACGAGAACCACATaGACCAGGGCTAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLRTRTT*TRAKSQ
Trigger: CTGTGACTTAGCCCTGGTTCATGTGGTTCTCGTCCT...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTCGTGCGCCAGCTGCGTaGGGAAGACGAGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCRAPAA*GRRGAG
Trigger: GCCCGCGCCTCGTCTTCCGCACGCAGCTGGCGCACG...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTGTCCTGGAAGTAAACTaGATTCTAGAGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCVLEVN*ILELSC
Trigger: GCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGAC...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTCAGGGTACATGCGGTaGAACCCGTCTCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCSGYMR*NPSPAL
Trigger: GAGGGCAGGAGACGGGTTGCACCGCATGTACCCTGA...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGAGCCACAGGCCTCTCTaGCCTCGCCGATGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLSHRPL*PRRWRP
Trigger: GGGCCGCCATCGGCGAGGCCAGAGAGGCCTGTGGCT...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCGTCTCAGAGCTGGCCTaGGCTCTAGCACATAGCTTG +
Preference number: 4 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCVSELA*ALAHSL
Trigger: CAAGCTATGTGCTAGAGCCCAGGCCAGCTCTGAGAC...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGCTCAGTCTCAGAGCTaGAATCATCACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLAQSQS*NHHWSW
Trigger: CCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTGCTGGGTGCGGTGCTTaGGCTGGATTGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSAGCGA*AGLSSG
Trigger: TCCAGAGCTCAATCCAGCCCAAGCACCGCACCCAGC...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACGTGCTTGGGCTGGATTaGGCTCTGGAGCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNVLGLD*ALELGQ
Trigger: CTGGCCAAGCTCCAGAGCTCAATCCAGCCCAAGCAC...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCGCTCGGGGTCCCGAATaGCCATGTAGCTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCARGPE*PCSFPA
Trigger: TGCTGGAAAGCTACATGGGCATTCGGGACCCCGAGC...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACTTCAGAACCAGCCTGTaGTCCAGAACTGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHFRTSL*SRTELS
Trigger: ACTCAGCTCAGTTCTGGAGCACAGGCTGGTTCTGAA...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCAGAAATAAGGTCACTTaGTGCTTCTGGGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCRNKVT*CFWGPQ
Trigger: CTGGGGCCCCCAGAAGCAGCAAGTGACCTTATTTCT...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCCAGCGTGCAAACTCCTaGGCGCTCGCTGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCQRANS*ALAVFL
Trigger: CAAGAAGACAGCGAGCGCCCAGGAGTTTGCACGCTG...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTAACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTGCATCGTGGAGGCCTCAGATCTGGGCTaGATTCTAGAGAAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LTGVPELDRVSRCGCIVEASDLG*ILEKGW
Trigger: CCAACCCTTCTCTAGAATCCAGCCCAGATCTGAGGC...CTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACCTTCAGAGCAGGGCTTaGTCTCAGATCTTATCTGGG +
Preference number: 4 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHLQSRA*SQILSG
Trigger: CCCAGATAAGATCTGAGACCAAGCCCTGCTCTGAAG...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCATGGGGTTCCAGAGCTaGTCTGAATCCTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCMGFQS*SESWSW
Trigger: CCAACTCCAGGATTCAGACCAGCTCTGGAACCCCAT...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTTTGAGCTCTGGAGCTTaGCCAGGCCTTGAAATTGGT +
Preference number: 4 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLLSSGA*PGLEIG
Trigger: ACCAATTTCAAGGCCTGGCCAAGCTCCAGAGCTCAA...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCTCTGAGTTCTGGAGCTaGGTTGGGCTCCGGAAATCA +
Preference number: 4 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCSEFWS*VGLRKS
Trigger: TGATTTCCGGAGCCCAACCCAGCTCCAGAACTCAGA...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCGCAGGGGCCTCAAGCTaGATTCTAGGGTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCAGASS*ILGSRP
Trigger: TGGCCTTGACCCTAGAATCCAGCTTGAGGCCCCTGC...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CAA 72 bp CTGCATCGTGGAGCTGTCCAGAGTTCCAGAGTCAGCTaGAGTTTTCCAGCAGGGCTTGGTCTCCGAGCTAGC +
Preference number: 4 (lower is better)
Translates to: LHRGAVQSSRVS*SFPAGLGLRAS
Trigger: GCTAGCTCGGAGACCAAGCCCTGCTGGAAAACTCAAGCTGACTCTGGAACTCTGGACAGCTCCACGATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCAGCTGGGCTGCTTCATaGATCTCACATGGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCSWAAS*ISHGFQ
Trigger: TTGGAACCCATGTGAGATTCATGAAGCAGCCCAGCT...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACCTTCCAGAGCTGGCTTaGATTCTTGAGCTTATCTGG +
Preference number: 4 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHLPELA*ILELIW
Trigger: CCAGATAAGCTCAAGAATTCAAGCCAGCTCTGGAAG...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACAGAGCTTATTCTCAATaGTGGGCTTGGTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHRAYSQ*WAWSQS
Trigger: GCTCTGAGACCAAGCCCAGCATTGAGAATAAGCTCT...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGGCAGCGCTGGGTCCTaGAGCTGGACCTGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCGSAGS*SWTCCR
Trigger: CCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGCTCCTGGGCAGCGCTaGGTCCTGGAGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCAPGQR*VLELDL
Trigger: CAGGTCCAGCTCCAGGACCCAGCGCTGCCCAGGAGC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGGCTGGTCGAGCTCCTaGGCAGCGCTGGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCGWSSS*AALGPG
Trigger: TCCAGGACCCAGCGCTGCCCAGGAGCTCGACCAGCC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGCCAGATTCTTGAACTaGTGTGAGTTCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHARFLN*CEFWNW
Trigger: CCAGTTCCAGAACTCACACCAGTTCAAGAATCTGGC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGGTGGGGTGGACTTCTaGGGTCCCACCCGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCGGVDF*GPTRGL
Trigger: CAAGCCCCGGGTGGGACCCCAGAAGTCCACCCCACC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CAA 72 bp CTTGGCCTCAGATCTGGGCTGGATTCTAGAGAAGGGTaGGGTTCTGGAGTTGGGCTGGGGCTCCAAATTGGA +
Preference number: 4 (lower is better)
Translates to: LGLRSGLDSREG*GSGVGLGLQIG
Trigger: TCCAATTTGGAGCCCCAGCCCAACTCCAGAACCCAACCCTTCTCTAGAATCCAGCCCAGATCTGAGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACGCTCGCGGACGTTGGTaGAGCCCTCGATCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDARGRW*SPRSCP
Trigger: CGGGCAAGATCGAGGGCTTCACCAACGTCCGCGAGC...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACTGGCACCAAGCTGTGTaGTGGAGCTGGGTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNWHQAV*WSWVLL
Trigger: AAGCAAGACCCAGCTCCAGCACACAGCTTGGTGCCA...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGGGAACTCAGGAGGGCTaGCCTAGGGGCAGGACTAGG +
Preference number: 4 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLGTQEG*PRGRTR
Trigger: CCTAGTCCTGCCCCTAGGGCAGCCCTCCTGAGTTCC...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCCTCCCTACCACCGCCTaGTGGAGAAATAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCLPTTA*WRNKVT
Trigger: AGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAG...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTTCTGGAACTGGGATTaGTCTCCAAGCTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCFWNWD*SPSWSG
Trigger: CCCAGACCAGCTTGGAGACCAATCCCAGTTCCAGAA...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTCTGGGGCTGTGGTCTaGAGCTGGTATCTAGAACCT +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCSGAVV*SWYLEP
Trigger: AGGTTCTAGATACCAGCTCCAGACCACAGCCCCAGA...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CAA 72 bp TTGGGTTCTGGAGTTGGGCTGGGGCTCCAAATTGGATaGGGTTCTAGAGAGGAACTTGTCCTCCGATCTGGG +
Preference number: 4 (lower is better)
Translates to: LGSGVGLGLQIG*GSREELVLRSG
Trigger: CCCAGATCGGAGGACAAGTTCCTCTCTAGAACCCAATCCAATTTGGAGCCCCAGCCCAACTCCAGAACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCGCTTCAGATGTGGCCTaGATTCTAGAACACGGCTTG +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCASDVA*ILEHGL
Trigger: CAAGCCGTGTTCTAGAATTCAGGCCACATCTGAAGC...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTTTCCCAAAGTCCAGTTaGATACCAGAGCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSFPKSS*IPELSG
Trigger: CCCAGACAGCTCTGGTATTCAACTGGACTTTGGGAA...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCGCTCAGCCAGATTCTTaGACTGGTGTGAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCAQPDS*TGVSSG
Trigger: TCCAGAACTCACACCAGTTCAAGAATCTGGCTGAGC...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACCCAAGGACCTGGATCTaGGCCAGGACCGGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDPRTWI*ARTGEA
Trigger: GGCTTCACCGGTCCTGGCTCAGATCCAGGTCCTTGG...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACTGCCTTTATTCACCATaGGCCCTCAGGGTACATGCG +
Preference number: 4 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNCLYSP*ALRVHA
Trigger: CGCATGTACCCTGAGGGCTCATGGTGAATAAAGGCA...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACCGAAAGGCCCTCTTGGGCTaGACCAGGCGCAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FMNLTWVPKLTGVPELDRKALLG*TRRRVK
Trigger: CTTCACCCTGCGCCTGGTGCAGCCCAAGAGGGCCTT...TCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGGATTCTAGAGATGTaGTTCGTCTCAGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCWILEM*FVSELA
Trigger: GGCCAGCTCTGAGACGAAGCACATCTCTAGAATCCA...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCGTTCCAGAGCTGGGCTaGTTCATGAATCTCACATGG +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCVPELG*FMNLTW
Trigger: CCATGTGAGATTCATGAAGCAGCCCAGCTCTGGAAC...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGGAGCTGGACTGGGCTaGAGGATGGGGATGGGCACT +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCGAGLG*RMGMGT
Trigger: AGTGCCCATCCCCATCCTGCAGCCCAGTCCAGCTCC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTCTACTGGACATTTGCTaGACCGACTTCTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSLLDIC*TDFSGQ
Trigger: TTGGCCAGAGAAGTCGGTCCAGCAAATGTCCAGTAG...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTTTCATGAATCTCACATaGGTTCCAAAATTAACTGGG +
Preference number: 4 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCFMNLT*VPKLTG
Trigger: CCCAGTTAATTTTGGAACCCATGTGAGATTCATGAA...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGGGCTCAGTCTCAGAGCTGGAATCATCACTGGAGCTGGACTGGGCTGCAGGATGCCTTGAAATTGGTCTaGGTCCTGGAAGTAAACTGC +
Preference number: 4 (lower is better)
Translates to: WAQSQSWNHHWSWTGLQDALKLV*VLEVNC
Trigger: GCAGTTTACTTCCAGGACCCAGACCAATTTCAAGGC...ATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACCTGGATTCTGGAACTTaGCTGGGTCTCAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNLDSGT*LGLSCC
Trigger: ACAGCAGCTGAGACCCAGCCAAGTTCCAGAATCCAG...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCGTTCCAGAAACAGGCTaGGTTCCAGAACTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCVPETG*VPELRW
Trigger: CCACCTTAGTTCTGGAACCCAGCCTGTTTCTGGAAC...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTGTTCTGGAACTGGATTaGGTTCCAGAAACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSVLELD*VPETGW
Trigger: CCAGCCTGTTTCTGGAACCCAATCCAGTTCCAGAAC...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTAGTGGGGCAAAGGGCTaGCGCCAAAGCTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCSGAKG*RQSWGL
Trigger: GAGTCCCCAGCTTTGGCGCCAGCCCTTTGCCCCACT...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CAA 72 bp CTGACTTTCAGAACTGCTCTGCTTCCCAAAGTCCAGTaGAATACCAGAGCTGTCTGGGGCTGTGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LTFRTALLPKVQ*NTRAVWGCGLE
Trigger: CTCCAGACCACAGCCCCAGACAGCTCTGGTATTCAACTGGACTTTGGGAAGCAGAGCAGTTCTGAAAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGAGCTTGGCCAGGCCTTaGAATTGGTCTGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLSLARP*NWSGSW
Trigger: CCAGGACCCAGACCAATTTCAAGGCCTGGCCAAGCT...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTCAGAGCTGGGTGCGGTaGTTGGGCTGGATTGAGCTC +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCQSWVR*LGWIEL
Trigger: GAGCTCAATCCAGCCCAAGCACCGCACCCAGCTCTG...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTAGGCTTCGGCGATCTTaGCGTACAGCTCGCGGACGT +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCRLRRS*RTARGR
Trigger: ACGTCCGCGAGCTGTACGCCAAGATCGCCGAAGCCT...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTCCGAGTGTCCAGGTGTaGCTGCATCGTGGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCPSVQV*LHRGAV
Trigger: GACAGCTCCACGATGCAGCCACACCTGGACACTCGG...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGACTGGGCAGCCGTGTaGACCTGGGTTTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCDWAAV*TWVSEL
Trigger: CAGCTCAGAAACCCAGGTCCACACGGCTGCCCAGTC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTTCTGTGTTTTGGAGCTaGCTGGGATTTCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSSVFWS*LGFQNQ
Trigger: CTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGA...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCCTGGTATCTAGAACCTaGCAGGGTTTTAGAGGCGAA +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCLVSRT*QGFRGE
Trigger: TTCGCCTCTAAAACCCTGCCAGGTTCTAGATACCAG...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGTGTCCAGGTGTGGCTaGATCGTGGAGCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCVSRCG*IVELSR
Trigger: TCTGGACAGCTCCACGATGCAGCCACACCTGGACAC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACCGAGTGCAACCCGTCTCCTaGCCTCCTTTTCCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FMNLTWVPKLTGVPELDRVQPVS*PPFPSK
Trigger: CTTGGAGGGAAAAGGAGGGCAGGAGACGGGTTGCAC...TCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACCGAGTCTCGCCTCGCACGTaGGCAAAGATGAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FMNLTWVPKLTGVPELDRVSPRT*AKMKSS
Trigger: GGAGGACTTCATCTTTGCCCACGTGCGAGGCGAGAC...TCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTCGCTCGCTGTCTTCTTaGACGTCTCCACCATGGTGG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCRSLSS*TSPPWW
Trigger: CCACCATGGTGGAGACGTCCAAGAAGACAGCGAGCG...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTACTTGTCCTCCGATCTaGGCTGGGTTCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCTCPPI*AGFWSR
Trigger: CCTGCTCCAGAACCCAGCCCAGATCGGAGGACAAGT...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTAGAAGGGTTGGGTTCTaGAGTTGGGCTGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCRRVGF*SWAGAP
Trigger: TGGAGCCCCAGCCCAACTCCAGAACCCAACCCTTCT...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGCTGCAGGATGGGGATaGGCACTTGGATGCAACTGG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCAAGWG*ALGCNW
Trigger: CCAGTTGCATCCAAGTGCCCATCCCCATCCTGCAGC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTAAGGAGAGTGGGGCTTaGCACCAAGCTGTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCKESGA*HQAVCW
Trigger: CCAGCACACAGCTTGGTGCCAAGCCCCACTCTCCTT...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACAACTGGTGTGAGTTCTaGAACTGGATTGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNNWCEF*NWIGFQ
Trigger: CTGGAACCCAATCCAGTTCCAGAACTCACACCAGTT...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACGCACGTGGGCAAAGATaGAGTCCTCCAGGCCTATCT +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDARGQR*SPPGLS
Trigger: AGATAGGCCTGGAGGACTTCATCTTTGCCCACGTGC...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACGTCACCCACGCACACTaGCTCGATCCGGTTGATGAT +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDVTHAH*LDPVDD
Trigger: ATCATCAACCGGATCGAGGCAGTGTGCGTGGGTGAC...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGCCTCTACTGGACATTTaGTGGACCGACTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLPLLDI*WTDFSG
Trigger: GCCAGAGAAGTCGGTCCAGCAAATGTCCAGTAGAGG...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGCAGCCCACAATGGAGTaGTCGTTGATGGCTTCGATG +
Preference number: 4 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLQPTME*SLMASM
Trigger: CATCGAAGCCATCAACGACCACTCCATTGTGGGCTG...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGCTGGACCGACTTCTCTaGCCAATCATATCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLLDRLL*PIISKA
Trigger: GGCCTTCGATATGATTGGCCAGAGAAGTCGGTCCAG...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGGTTCTGGAGTTGGGCTaGGGCTCCAAATTGGATTGG +
Preference number: 4 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLVLELG*GSKLDW
Trigger: CCAATCCAATTTGGAGCCCCAGCCCAACTCCAGAAC...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCGTCTTAAAATGTGTCTaGGTTCCAGAGTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCVLKCV*VPEFGL
Trigger: CAAGCCAAACTCTGGAACCCAGACACATTTTAAGAC...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGCACTTGGATGCAACTaGGGTTGGGATCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCALGCN*GWDLDW
Trigger: CCAGTCCAGATCCCAACCCCAGTTGCATCCAAGTGC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACAATCATCACTGGAGCTaGACTGGGCTGCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDNHHWS*TGLQDG
Trigger: CCCATCCTGCAGCCCAGTCCAGCTCCAGTGATGATT...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACGCTGTGTGCTGGAGCTaGGTCTTGCTTCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDAVCWS*VLLPRW
Trigger: CCATCTTGGAAGCAAGACCCAGCTCCAGCACACAGC...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGCTGTGGTCTGGAGCTaGTATCTAGAACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCAVVWS*YLEPGR
Trigger: CCTGCCAGGTTCTAGATACCAGCTCCAGACCACAGC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACCGAAATACCAGAGCTGTCTaGGGCTGTGGTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FMNLTWVPKLTGVPELDRNTRAV*GCGLEL
Trigger: CAGCTCCAGACCACAGCCCCAGACAGCTCTGGTATT...TCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTAAGGCCAGGGGTCTGTaGGCAGATTCCATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCKARGL*ADSISR
Trigger: CCTGGAAATGGAATCTGCCCACAGACCCCTGGCCTT...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGCCTACCACCGCCTGCTaGAGAAATAAGGTCACTTGC +
Preference number: 4 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLPTTAC*RNKVTC
Trigger: GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGG...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp TTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACCGACAATGGAGTGGTCGTTaGTGGCTTCGATGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: FMNLTWVPKLTGVPELDRQWSGR*WLRCCH
Trigger: GTGACAGCATCGAAGCCATCAACGACCACTCCATTG...TCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACGCTGGTCTGAGTTCTTaGATAGGATTTGATTTGGGA +
Preference number: 4 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNAGLSS*IGFDLG
Trigger: TCCCAAATCAAATCCTATTCAAGAACTCAGACCAGC...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTTGGCTGGGTCTCAGCTaGTGTCTGTGTTTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCWLGLS*CLCFGA
Trigger: AGCTCCAAAACACAGACAGCAGCTGAGACCCAGCCA...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACCGACTGGGTTCCAGAGTTTaGCTTGTTGTCAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: FMNLTWVPKLTGVPELDRLGSRV*LVVRAQ
Trigger: CTGAGCCCTGACAACAAGCCAAACTCTGGAACCCAG...TCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACGTCTCCGAGCTAGCCTaGATTCTGGAACTGGGATTG +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDVSELA*ILELGL
Trigger: CAATCCCAGTTCCAGAATCCAGGCTAGCTCGGAGAC...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTTGCTTCCAAGATGGATaGGGTTCCAGAGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCCFQDG*GSRAGL
Trigger: CAGACCAGCTCTGGAACCCCATCCATCTTGGAAGCA...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACGTCTTGCTTCCAAGATaGATGGGGTTCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDVLLPR*MGFQSW
Trigger: CCAGCTCTGGAACCCCATCCATCTTGGAAGCAAGAC...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACGTCCCAGGACTAGATTaGACTCCAGAGCTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDVPGLD*TPELSW
Trigger: CCAGCTAAGCTCTGGAGTCCAATCTAGTCCTGGGAC...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
3UTR CAA 72 bp TGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTaGTTGTCAGGGCTCAGCTGGATTCTAGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: WVLKCVWVPEFG*LSGLSWILEMC
Trigger: GCACATCTCTAGAATCCAGCTGAGCCCTGACAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACGCTGGCTTGAATTCTTaGGCTTATCTGGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDAGLNS*AYLGPR
Trigger: TCTGGGACCCAGATAAGCTCAAGAATTCAAGCCAGC...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR TCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTTTTCCAGAACTAGTCTaGGTTCTGGAGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCFPELV*VLELGW
Trigger: CCAACCCAGCTCCAGAACTCAGACTAGTTCTGGAAA...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR GCA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGATCAACCTTCCGAGATaGCTCCTCCTCAAACTCACT +
Preference number: 4 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLINLPR*LLLKLT
Trigger: AGTGAGTTTGAGGAGGAGGCATCTCGGAAGGTTGAT...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACAGAATAAAATCTCGGTaGGCGCGATCCCGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDRIKSR*ARSRRL
Trigger: AAGCCTTCGGGATCGCGCCCACCGAGATTTTATTCT...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACCACTTTCGCCTCTACTaGACATTTGCTGGACCGACT +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDHFRLY*TFAGPT
Trigger: AGTCGGTCCAGCAAATGTCCAGTAGAGGCGAAAGTG...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGGTTCCAAAATTAACTaGGGTTCCGGAGCTAGACCG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCGSKIN*GSGARP
Trigger: CGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTTGTTTTGGAGCTGGCTaGGATTTCAGAACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCCFGAG*DFRTSL
Trigger: CAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACA...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACATTCTGGAACTTGGCTaGGTCTCAGCTGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDILELG*VSAAVC
Trigger: ACAGACAGCAGCTGAGACCCAGCCAAGTTCCAGAAT...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACCGAACTCCAGAGCTTAGCTaGATTCTGGAACTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FMNLTWVPKLTGVPELDRTPELS*ILELGW
Trigger: CCAGCCAAGTTCCAGAATCCAGCTAAGCTCTGGAGT...TCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACCGAGTCTCAGAGCTGGACTaGGTTCTGGAACTAAGTTGG +
Preference number: 4 (lower is better)
Translates to: FMNLTWVPKLTGVPELDRVSELD*VLELSW
Trigger: CCAACTTAGTTCCAGAACCCAGTCCAGCTCTGAGAC...TCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp TTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACCGAGTCTCCAAGCTGGTCTaGGTCTTAAAATGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FMNLTWVPKLTGVPELDRVSKLV*VLKCVW
Trigger: CCAGACACATTTTAAGACCCAGACCAGCTTGGAGAC...TCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTCCTGGGTTTCTGAGCTaGTCTGAGTTCTTGAATAGG +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCPGFLS*SEFLNR
Trigger: CCTATTCAAGAACTCAGACCAGCTCAGAAACCCAGG...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CCA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGCTGACTTCCAGAGCTaGCTTGAATTCTTGAGCTTA +
Preference number: 4 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCADFQS*LEFLSL
Trigger: TAAGCTCAAGAATTCAAGCCAGCTCTGGAAGTCAGC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS TCA 90 bp GGCCAATCATATCGAAGGCCCTCTTGGGCTGCACCAGGCGCAGGGTaGAGGGCTGGGACTTGGGCAGCTCCCGGAGCATCTTGGCCACCT +
Preference number: 5 (lower is better)
Translates to: GQSYRRPSWAAPGAG*RAGTWAAPGASWPP
Trigger: AGGTGGCCAAGATGCTCCGGGAGCTGCCCAAGTCCCAGCCCTTCACCCTGCGCCTGGTGCAGCCCAAGAGGGCCTTCGATATGATTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS-3UTR CAA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGTGAAGCCCTCGATCTaGCCCGTGGGGCTCCCGTGC +
Preference number: 5 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLVKPSI*PVGLPC
Trigger: GCACGGGAGCCCCACGGGCAAGATCGAGGGCTTCAC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TTAACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTGCATCGTGGAGGGTCCCACCCGGGGCTaGGGAGAGACGGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: LTGVPELDRVSRCGCIVEGPTRG*GETAGF
Trigger: GAAGCCAGCCGTCTCTCCCAAGCCCCGGGTGGGACC...CTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTCAAGGAGAGTGGGGCTaGGCACCAAGCTGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCQGEWG*APSCVL
Trigger: CAGCACACAGCTTGGTGCCAAGCCCCACTCTCCTTG...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS CCA 90 bp CGGAGTCTAAACAGCGTGCAAACTCCTGGGCGCTCGCTGTCTTCTTaGACGTCTCCACCATGGTGGACGCCTGGCCCCTTACCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: RSLNSVQTPGRSLSS*TSPPWWTPGPLPSS
Trigger: CGAGCTGGGTAAGGGGCCAGGCGTCCACCATGGTGGAGACGTCCAAGAAGACAGCGAGCGCCCAGGAGTTTGCACGCTGTTTAGACTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644946.1
CDS CCA 90 bp CGGAGTCTAAACAGCGTGCAAACTCCTGGGCGCTCGCTGTCTTCTTaGACGTCTCCACCATGGTGGACGCCAGCTCGGGGTCCCGAATGC +
Preference number: 5 (lower is better)
Translates to: RSLNSVQTPGRSLSS*TSPPWWTPARGPEC
Trigger: GCATTCGGGACCCCGAGCTGGCGTCCACCATGGTGGAGACGTCCAAGAAGACAGCGAGCGCCCAGGAGTTTGCACGCTGTTTAGACTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACAAGGCTTCGGCGATCTaGGCGTACAGCTCGCGGACG +
Preference number: 5 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHKASAI*AYSSRT
Trigger: CGTCCGCGAGCTGTACGCCAAGATCGCCGAAGCCTT...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTTGGATGCAACTGGGGTaGGGATCTGGACTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLWMQLG*GSGLGS
Trigger: GCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCCA...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGGTGCTTGGGCTGGATaGAGCTCTGGAGCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLGAWAG*SSGAWP
Trigger: TGGCCAAGCTCCAGAGCTCAATCCAGCCCAAGCACC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTGGTTTTAGAGGCGAATaGAGTCCCAGAGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCGFRGE*SPRGWS
Trigger: CGACCAGCCTCTGGGACTCAATTCGCCTCTAAAACC...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS CCA 90 bp AAGGCGAACTCGCCCAAGACGGAGTCTAAACAGCGTGCAAACTCCTaGGCGCTCGCTGTCTTCTTGGACGTCTCCACCATGGTGGACGCC +
Preference number: 5 (lower is better)
Translates to: KANSPKTESKQRANS*ALAVFLDVSTMVDA
Trigger: GGCGTCCACCATGGTGGAGACGTCCAAGAAGACAGCGAGCGCCCAGGAGTTTGCACGCTGTTTAGACTCCGTCTTGGGCGAGTTCGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS-3UTR CAA 90 bp TGGGCAGCGCTGGGTCCTGGAGCTGGACCTGCTGTCGGAACTAGACAGGGCTGTACTGCCTCGATCCGGTaGATGATACTGCCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: WAALGPGAGPAVGTRQGCTASIR*MILPSL
Trigger: CAAGGAAGGCAGTATCATCAACCGGATCGAGGCAGT...ACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGCTCCAGGACCCAGCGCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp GGCTGCCCTAGGGGCAGGACTAGGAGTGACAGATATGGTGGGTGGGGTGGACTTGGTTGGGTTCTGGAGTaGGGCTGGGGCTCCAAATTG +
Preference number: 5 (lower is better)
Translates to: GCPRGRTRSDRYGGWGGLGWVLE*GWGSKL
Trigger: CAATTTGGAGCCCCAGCCCAACTCCAGAACCCAACC...AAGTCCACCCCACCCACCATATCTGTCACTCCTAGTCCTGCCCCTAGGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGCTCTAGCACATAGCTaGGCCTCAGATCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHALAHS*ASDLGW
Trigger: CCAGCCCAGATCTGAGGCCAAGCTATGTGCTAGAGC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCGTTTTCCAGCAGGGCTaGGTCTCCGAGCTAGCCTGG +
Preference number: 5 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCVFQQG*VSELAW
Trigger: CCAGGCTAGCTCGGAGACCAAGCCCTGCTGGAAAAC...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TTAACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTGCATCGTGGAGGATGGGGATGGGCACTaGGATGCAACTGGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: LTGVPELDRVSRCGCIVEDGDGH*DATGVG
Trigger: CCCAACCCCAGTTGCATCCAAGTGCCCATCCCCATC...CTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACAGTTCTGGAGCTGGGTaGGGCTCCGGAAATCAGCTG +
Preference number: 5 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHSSGAG*GSGNQL
Trigger: CAGCTGATTTCCGGAGCCCAACCCAGCTCCAGAACT...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACGTGACCTCCACCTCCTaGGTCTCGCCTCGCACGTGG +
Preference number: 5 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNVTSTS*VSPRTW
Trigger: CCACGTGCGAGGCGAGACCAAGGAGGTGGAGGTCAC...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGGCCAGGCCTTGAAATaGGTCTGGGTCCTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHGQALK*VWVLEV
Trigger: TACTTCCAGGACCCAGACCAATTTCAAGGCCTGGCC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TTAACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTGCATCGTGGAGGAGCTTGGCCAGGCCTaGAAATTGGTCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: LTGVPELDRVSRCGCIVEELGQA*KLVWVL
Trigger: CAGGACCCAGACCAATTTCAAGGCCTGGCCAAGCTC...CTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS GCA 90 bp GCAGGGTCTCCCTCCCGCTGGTCACTTTCGCCTCTACTGGACATTTaGTGGACCGACTTCTCTGGCCAATCATATCGAAGGCCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: AGSPSRWSLSPLLDI*WTDFSGQSYRRPSW
Trigger: CCAAGAGGGCCTTCGATATGATTGGCCAGAGAAGTCGGTCCAGCAAATGTCCAGTAGAGGCGAAAGTGACCAGCGGGAGGGAGACCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS CCA 90 bp ACGAAGCCGCAGGGTCTCCCTCCCGCTGGTCACTTTCGCCTCTACTaGACATTTGCTGGACCGACTTCTCTGGCCAATCATATCGAAGGC +
Preference number: 5 (lower is better)
Translates to: TKPQGLPPAGHFRLY*TFAGPTSLANHIEG
Trigger: GCCTTCGATATGATTGGCCAGAGAAGTCGGTCCAGCAAATGTCCAGTAGAGGCGAAAGTGACCAGCGGGAGGGAGACCCTGCGGCTTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS-3UTR CAA 90 bp TTAACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTGCATCGTGGAGGGCTGGGGCTCCAAATaGGATTGGGTTCTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: LTGVPELDRVSRCGCIVEGWGSK*DWVLER
Trigger: CCTCTCTAGAACCCAATCCAATTTGGAGCCCCAGCC...CTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TCTGAGCCAGGACCGGTGAAGCCCCTGTTTTCACCACCGCACACTCCCTACCACGATTCTAGAGAAGGGTaGGGTTCTGGAGTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SEPGPVKPLFSPPHTPYHDSREG*GSGVGL
Trigger: CAGCCCAACTCCAGAACCCAACCCTTCTCTAGAATC...GTGGTAGGGAGTGTGCGGTGGTGAAAACAGGGGCTTCACCGGTCCTGGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCGGCTCAGCCAGATTCTaGAACTGGTGTGAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCGSARF*NWCEFW
Trigger: CCAGAACTCACACCAGTTCAAGAATCTGGCTGAGCC...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCACAATGGAGTGGTCGTaGATGGCTTCGATGCTGTCA +
Preference number: 5 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCTMEWS*MASMLS
Trigger: TGACAGCATCGAAGCCATCAACGACCACTCCATTGT...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TCTTGCAGTGGTCTGGGTCCCGGAGCTGAGCTGGTTTCCAGAACTAGTCTGAGTGCCTCTACTGGACATTaGCTGGACCGACTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: SCSGLGPGAELVSRTSLSASTGH*LDRLLW
Trigger: CCAGAGAAGTCGGTCCAGCAAATGTCCAGTAGAGGC...ACTCAGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp CACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTGCATTCTAGAACACGGCTaGGTCTCTATGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: HHRTLPTTACWRNKVTCCILEHG*VSMLGL
Trigger: CAAGCCCAGCATAGAGACCAAGCCGTGTTCTAGAAT...GCAGCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TTAACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTGCATCGTGGAGGGGCTCCAAATTGGATaGGGTTCTAGAGAGGAACTT +
Preference number: 5 (lower is better)
Translates to: LTGVPELDRVSRCGCIVEGLQIG*GSREEL
Trigger: AAGTTCCTCTCTAGAACCCAATCCAATTTGGAGCCC...CTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCTCTGGGTTCCAGAGTTaGGCTTGTTGTCAGGGCTCA +
Preference number: 5 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCSGFQS*ACCQGS
Trigger: TGAGCCCTGACAACAAGCCAAACTCTGGAACCCAGA...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TTAACTGGGGTTCCGGAGCTAGACCGAGTGTCCAGGTGTGGCTGCATCGTGGAGATGATACTGCCTTCCTaGATTCTCTTGATGAAGGCG +
Preference number: 5 (lower is better)
Translates to: LTGVPELDRVSRCGCIVEMILPS*ILLMKA
Trigger: CGCCTTCATCAAGAGAATCAAGGAAGGCAGTATCAT...CTCCACGATGCAGCCACACCTGGACACTCGGTCTAGCTCCGGAACCCCAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp CTGTCTGTGTTTTGGAGCTGGCTGGGATTTCAGAACCAGCCTGTGCTCCAGAACCCAGAGTTTGGCTTGTaGTCAGGGCTCAGCTGGATT +
Preference number: 5 (lower is better)
Translates to: LSVFWSWLGFQNQPVLQNPEFGL*SGLSWI
Trigger: AATCCAGCTGAGCCCTGACAACAAGCCAAACTCTGG...GTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCAAAACACAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACCGAAGCTGGGTGCGGTGCTaGGGCTGGATTGAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: FMNLTWVPKLTGVPELDRSWVRC*GWIELW
Trigger: CCAGAGCTCAATCCAGCCCAAGCACCGCACCCAGCT...TCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TTTCACCACCGCACACTCCCTACCACCGCCTGCTGGAGAAATAAGGTCACTTGCCTTCCCAAAGTCCAGTaGAATACCAGAGCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: FHHRTLPTTACWRNKVTCLPKVQ*NTRAVW
Trigger: CCAGACAGCTCTGGTATTCAACTGGACTTTGGGAAG...GCAAGTGACCTTATTTCTCCAGCAGGCGGTGGTAGGGAGTGTGCGGTGGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTGCGCTCGCTGTCTTCTaGGACGTCTCCACCATGGTG +
Preference number: 5 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCALAVF*DVSTMV
Trigger: CACCATGGTGGAGACGTCCAAGAAGACAGCGAGCGC...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGGGTTCTGGAACTAAGTaGGGCTCCAGAGTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLGSGTK*GSRVGL
Trigger: CAGCCCGACTCTGGAGCCCAACTTAGTTCCAGAACC...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS GCA 90 bp AATGGAGTGGTCGTTGATGGCTTCGATGCTGTCACCCACGCACACTaGCTCGATCCGGTTGATGATACTGCCTTCCTTGATTCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: NGVVVDGFDAVTHAH*LDPVDDTAFLDSLD
Trigger: ATCAAGAGAATCAAGGAAGGCAGTATCATCAACCGGATCGAGGCAGTGTGCGTGGGTGACAGCATCGAAGCCATCAACGACCACTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS-3UTR CAA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGGTTCTAGAGAGGAACTaGTCCTCCGATCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLVLERN*SSDLGW
Trigger: CCAGCCCAGATCGGAGGACAAGTTCCTCTCTAGAAC...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGGTTCCAGAGTTTGGCTaGTTGTCAGGGCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLVPEFG*LSGLSW
Trigger: CCAGCTGAGCCCTGACAACAAGCCAAACTCTGGAAC...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGGCTGCTGTCTGTGTTTaGGAGCTGGCTGGGATTTCA +
Preference number: 5 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLAAVCV*ELAGIS
Trigger: TGAAATCCCAGCCAGCTCCAAAACACAGACAGCAGC...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TGCTTCATGAATCTCACATGGGTTCCAAAATTAACTGGGGTTCCGGAGCTAGACATTCTGGAACTGGGATaGGTCTCCAAGCTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: CFMNLTWVPKLTGVPELDILELG*VSKLVW
Trigger: CCAGACCAGCTTGGAGACCAATCCCAGTTCCAGAAT...GTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp TCCAAGCTGGTCTGGGTCTTAAAATGTGTCTGGGTTCCAGAGTTTGGCTTGTTGAGTTCCAGAGTCAGCTaGAGTTTTCCAGCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SKLVWVLKCVWVPEFGLLSSRVS*SFPAGL
Trigger: AAGCCCTGCTGGAAAACTCAAGCTGACTCTGGAACT...CAACAAGCCAAACTCTGGAACCCAGACACATTTTAAGACCCAGACCAGCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS-3UTR CAA 90 bp GAAATTGGTCTGGGTCCTGGAAGTAAACTGCATTCTAGAGCTGAGCTGCATTGTTGGAGCTTAATTCTATaGCTGCGATGGCCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: EIGLGPGSKLHSRAELHCWSLIL*LRWPGS
Trigger: GGACCCAGGCCATCGCAGCAATAGAATTAAGCTCCA...ACAATGCAGCTCAGCTCTAGAATGCAGTTTACTTCCAGGACCCAGACCAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS CCA 72 bp CGGTCCCCCGGGCCTCCCGGGCCGCTGCTCCCTCCATaGCGGGAGAAGTTCGGCCACCCACCCGGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: RSPGPPGPLLPP*REKFGHPPGPS
Trigger: CGAGGGCCCGGGTGGGTGGCCGAACTTCTCCCGCCATGGAGGGAGCAGCGGCCCGGGAGGCCCGGGGGACCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS CCA 72 bp GGGCAAACTAGCCACAGGCCTCTCTGGCCTCGCCGATaGCGGCCCACACTTCCACCACAAACTCGTCGGGGA +
Preference number: 6 (lower is better)
Translates to: GQTSHRPLWPRR*RPTLPPQTRRG
Trigger: TCCCCGACGAGTTTGTGGTGGAAGTGTGGGCCGCCATCGGCGAGGCCAGAGAGGCCTGTGGCTAGTTTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS CAA 72 bp AAACAGCGTGCAAACTCCTGGGCGCTCGCTGTCTTCTaGGACGTCTCCACCATGGTGGACGCCAGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: KQRANSWALAVF*DVSTMVDASSG
Trigger: CCCCGAGCTGGCGTCCACCATGGTGGAGACGTCCAAGAAGACAGCGAGCGCCCAGGAGTTTGCACGCTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS CAA 90 bp ACGGAGTCTAAACAGCGTGCAAACTCCTGGGCGCTCGCTGTCTTCTaGGACGTCTCCACCATGGTGGACGCCTGGCCCCTTACCCAGCTC +
Preference number: 6 (lower is better)
Translates to: TESKQRANSWALAVF*DVSTMVDAWPLTQL
Trigger: GAGCTGGGTAAGGGGCCAGGCGTCCACCATGGTGGAGACGTCCAAGAAGACAGCGAGCGCCCAGGAGTTTGCACGCTGTTTAGACTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644946.1
CDS CAA 90 bp ACGGAGTCTAAACAGCGTGCAAACTCCTGGGCGCTCGCTGTCTTCTaGGACGTCTCCACCATGGTGGACGCCAGCTCGGGGTCCCGAATG +
Preference number: 6 (lower is better)
Translates to: TESKQRANSWALAVF*DVSTMVDASSGSRM
Trigger: CATTCGGGACCCCGAGCTGGCGTCCACCATGGTGGAGACGTCCAAGAAGACAGCGAGCGCCCAGGAGTTTGCACGCTGTTTAGACTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644452.3
CDS TCA 72 bp CCTCGTAGTGGCGGCAGCCCACAATGGAGTGGTCGTTaGTGGCTTCGATGCTGTCACCCACGCACACTGCCT +
Preference number: 6 (lower is better)
Translates to: PRSGGSPQWSGR*WLRCCHPRTLP
Trigger: AGGCAGTGTGCGTGGGTGACAGCATCGAAGCCATCAACGACCACTCCATTGTGGGCTGCCGCCACTACGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS CCA 72 bp AACAGCGTGCAAACTCCTGGGCGCTCGCTGTCTTCTTaGACGTCTCCACCATGGTGGACGCCTGGCCCCTTA +
Preference number: 6 (lower is better)
Translates to: NSVQTPGRSLSS*TSPPWWTPGPL
Trigger: TAAGGGGCCAGGCGTCCACCATGGTGGAGACGTCCAAGAAGACAGCGAGCGCCCAGGAGTTTGCACGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644946.1
CDS CAA 72 bp AAACAGCGTGCAAACTCCTGGGCGCTCGCTGTCTTCTaGGACGTCTCCACCATGGTGGACGCCTGGCCCCTT +
Preference number: 6 (lower is better)
Translates to: KQRANSWALAVF*DVSTMVDAWPL
Trigger: AAGGGGCCAGGCGTCCACCATGGTGGAGACGTCCAAGAAGACAGCGAGCGCCCAGGAGTTTGCACGCTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644946.1
CDS CAA 90 bp CGCAGGGTCTCCCTCCCGCTGGTCACTTTCGCCTCTACTGGACATTaGCTGGACCGACTTCTCTGGCCAATCATATCGAAGGCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: RRVSLPLVTFASTGH*LDRLLWPIISKALL
Trigger: CAAGAGGGCCTTCGATATGATTGGCCAGAGAAGTCGGTCCAGCAAATGTCCAGTAGAGGCGAAAGTGACCAGCGGGAGGGAGACCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS CCA 72 bp TCGCCCAAGACGGAGTCTAAACAGCGTGCAAACTCCTaGGCGCTCGCTGTCTTCTTGGACGTCTCCACCATG +
Preference number: 6 (lower is better)
Translates to: SPKTESKQRANS*ALAVFLDVSTM
Trigger: CATGGTGGAGACGTCCAAGAAGACAGCGAGCGCCCAGGAGTTTGCACGCTGTTTAGACTCCGTCTTGGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS CCA 72 bp CAGGGTCTCCCTCCCGCTGGTCACTTTCGCCTCTACTaGACATTTGCTGGACCGACTTCTCTGGCCAATCAT +
Preference number: 6 (lower is better)
Translates to: QGLPPAGHFRLY*TFAGPTSLANH
Trigger: ATGATTGGCCAGAGAAGTCGGTCCAGCAAATGTCCAGTAGAGGCGAAAGTGACCAGCGGGAGGGAGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS GCA 72 bp CCCTCCCGCTGGTCACTTTCGCCTCTACTGGACATTTaGTGGACCGACTTCTCTGGCCAATCATATCGAAGG +
Preference number: 6 (lower is better)
Translates to: PSRWSLSPLLDI*WTDFSGQSYRR
Trigger: CCTTCGATATGATTGGCCAGAGAAGTCGGTCCAGCAAATGTCCAGTAGAGGCGAAAGTGACCAGCGGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS CCA 72 bp TTCGCCTCTACTGGACATTTGCTGGACCGACTTCTCTaGCCAATCATATCGAAGGCCCTCTTGGGCTGCACC +
Preference number: 6 (lower is better)
Translates to: FASTGHLLDRLL*PIISKALLGCT
Trigger: GGTGCAGCCCAAGAGGGCCTTCGATATGATTGGCCAGAGAAGTCGGTCCAGCAAATGTCCAGTAGAGGCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS GCA 72 bp GTCGTTGATGGCTTCGATGCTGTCACCCACGCACACTaGCTCGATCCGGTTGATGATACTGCCTTCCTTGAT +
Preference number: 6 (lower is better)
Translates to: VVDGFDAVTHAH*LDPVDDTAFLD
Trigger: ATCAAGGAAGGCAGTATCATCAACCGGATCGAGGCAGTGTGCGTGGGTGACAGCATCGAAGCCATCAACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1
CDS CAA 72 bp TCCCTCCCGCTGGTCACTTTCGCCTCTACTGGACATTaGCTGGACCGACTTCTCTGGCCAATCATATCGAAG +
Preference number: 6 (lower is better)
Translates to: SLPLVTFASTGH*LDRLLWPIISK
Trigger: CTTCGATATGATTGGCCAGAGAAGTCGGTCCAGCAAATGTCCAGTAGAGGCGAAAGTGACCAGCGGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644452.3
ENST00000644946.1