RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GIN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000145723

Ensembl transcript IDs: ENST00000399004.7, ENST00000508629.5, ENST00000511400.1, ENST00000512248.5, ENST00000513603.1, ENST00000513747.1

Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCATCCCAATTGTTTGGGTGGTCAGCACAGTGTTTGGAGAGAAATaGTTTGATTGTGTTAGGTGTACTTTCCGTTGGGTTAACAGTTCC +
Preference number: 1 (lower is better)
Translates to: IIPIVWVVSTVFGEK*FDCVRCTFRWVNSS
Trigger: GGAACTGTTAACCCAACGGAAAGTACACCTAACACAATCAAAGCATTTCTCTCCAAACACTGTGCTGACCACCCAAACAATTGGGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR GCA 90 bp CATAAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTaGTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCC +
Preference number: 1 (lower is better)
Translates to: HKVSYLPFQLYPSLS*FFTLYPRQCRQQEA
Trigger: GGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR TCA 90 bp AATCGGAATTTCAGGCAATCCAATGTAGTCATGATCTGCCACTACTaGACCTTGCAAGAGATAAAGACTTTCTTGTTCACTGGATTCTCT +
Preference number: 1 (lower is better)
Translates to: NRNFRQSNVVMICHY*TLQEIKTFLFTGFS
Trigger: AGAGAATCCAGTGAACAAGAAAGTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCATGACTACATTGGATTGCCTGAAATTCCGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR GCA 90 bp GACTATACCAATAGTTGCATCTTCCACCAGAATATTTGCTTGATATaGTCCAATCGGAATTTCAGGCAATCCAATGTAGTCATGATCTGC +
Preference number: 1 (lower is better)
Translates to: DYTNSCIFHQNICLI*SNRNFRQSNVVMIC
Trigger: GCAGATCATGACTACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGATGCAACTATTGGTATAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
3UTR GCA 90 bp GCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCTaGCTTTTTATGAATCATTACAATACTTTTCCATTTCTGTGTATT +
Preference number: 1 (lower is better)
Translates to: ASSLYTRGSVDNKKP*LFMNHYNTFPFLCI
Trigger: AATACACAGAAATGGAAAAGTATTGTAATGATTCATAAAAAGGCAGGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR GCA 90 bp TTCATTATCGACTATACCAATAGTTGCATCTTCCACCAGAATATTTaGTTGATATGCTCCAATCGGAATTTCAGGCAATCCAATGTAGTC +
Preference number: 1 (lower is better)
Translates to: FIIDYTNSCIFHQNI*LICSNRNFRQSNVV
Trigger: GACTACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGATGCAACTATTGGTATAGTCGATAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
3UTR CCA 90 bp GTGTTTGGAGAGAAATGCTTTGATTGTGTTAGGTGTACTTTCCGTTaGGTTAACAGTTCCAGAGGTGTGAGAAATTACAATTTGCTTTAT +
Preference number: 1 (lower is better)
Translates to: VFGEKCFDCVRCTFR*VNSSRGVRNYNLLY
Trigger: ATAAAGCAAATTGTAATTTCTCACACCTCTGGAACTGTTAACCCAACGGAAAGTACACCTAACACAATCAAAGCATTTCTCTCCAAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CCA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAACAGGCTGGAGAGCTGTaGCATGAGCGCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQQAGEL*HERGSL
Trigger: CAGTGAGCCGCGCTCATGCCACAGCTCTCCAGCCTG...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR GCA 90 bp CTCCAATCGGAATTTCAGGCAATCCAATGTAGTCATGATCTGCCACTACTGAACAGGTGTGGGCCACCATaGCTGGTCGATGGTTTTATC +
Preference number: 2 (lower is better)
Translates to: LQSEFQAIQCSHDLPLLNRCGPP*LVDGFI
Trigger: GATAAAACCATCGACCAGGCATGGTGGCCCACACCT...GTTCAGTAGTGGCAGATCATGACTACATTGGATTGCCTGAAATTCCGATTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CCA 90 bp CTCCAATCGGAATTTCAGGCAATCCAATGTAGTCATGATCTGCCACTACTGAACCTGGTCTCGAACTCCTaGGGTCAAGTGATCATCCTG +
Preference number: 2 (lower is better)
Translates to: LQSEFQAIQCSHDLPLLNLVSNS*GQVIIL
Trigger: CAGGATGATCACTTGACCCCAGGAGTTCGAGACCAG...GTTCAGTAGTGGCAGATCATGACTACATTGGATTGCCTGAAATTCCGATTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CCA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTGCAGCCTCGACCTCCTaGGGTCAAGCAATGCTCCTA +
Preference number: 2 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPAASTS*GQAMLL
Trigger: TAGGAGCATTGCTTGACCCCAGGAGGTCGAGGCTGC...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR TCA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAAACTCCTGGGGTCAAGTaGTCATCCTGCCTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKTPGVK*SSCLGF
Trigger: GAAGCCAAGGCAGGATGATCACTTGACCCCAGGAGT...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR GCA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAAAGGTGTGGGCCACCATaGCTGGTCGATGGTTTTATC +
Preference number: 2 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQRCGPP*LVDGFI
Trigger: GATAAAACCATCGACCAGGCATGGTGGCCCACACCT...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CCA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAAGTGATCATCCTGCCTTaGCTTCCCAAAGCGCTGGGA +
Preference number: 2 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKVIILP*LPKALG
Trigger: TCCCAGCGCTTTGGGAAGCCAAGGCAGGATGATCAC...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR CAA 90 bp TCCCAATTGTTTGGGTGGTCAGCACAGTGTTTGGAGAGAAATGCTTaGATTGTGTTAGGTGTACTTTCCGTTGGGTTAACAGTTCCAGAG +
Preference number: 2 (lower is better)
Translates to: SQLFGWSAQCLERNA*IVLGVLSVGLTVPE
Trigger: CTCTGGAACTGTTAACCCAACGGAAAGTACACCTAACACAATCAAAGCATTTCTCTCCAAACACTGTGCTGACCACCCAAACAATTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR TCA 90 bp AGATTTGGGCTGGAATTTATTTCCCAAGAAGTAGGGGTGCTTTGCCTGTTCTCTTCACCATCCACTTCATaGAGACTATCTGAAGTCTCA +
Preference number: 2 (lower is better)
Translates to: RFGLEFISQEVGVLCLFSSPSTS*RLSEVS
Trigger: TGAGACTTCAGATAGTCTTCATGAAGTGGATGGTGA...AGAGAACAGGCAAAGCACCCCTACTTCTTGGGAAATAAATTCCAGCCCAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CCA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTCTGGTCTCGAACTCCTaGGGTCAAGTGATCATCCTG +
Preference number: 2 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTLVSNS*GQVIIL
Trigger: CAGGATGATCACTTGACCCCAGGAGTTCGAGACCAG...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR TCA 90 bp AGATTTGGGCTGGAATTTATTTCCCAAGAAGTAGGGGTGCTTTGCCTGTTCTCTAACCATACAAAGGTTTaGGAGATTTGGGCTGGAATT +
Preference number: 2 (lower is better)
Translates to: RFGLEFISQEVGVLCLFSNHTKV*EIWAGI
Trigger: AATTCCAGCCCAAATCTCTCAAACCTTTGTATGGTT...AGAGAACAGGCAAAGCACCCCTACTTCTTGGGAAATAAATTCCAGCCCAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR GCA 90 bp AGATTTGGGCTGGAATTTATTTCCCAAGAAGTAGGGGTGCTTTGCCTGTTCTCTTCTACACCTGTCTTCTaGAATTTAGCATGCCTTAAC +
Preference number: 2 (lower is better)
Translates to: RFGLEFISQEVGVLCLFSSTPVF*NLACLN
Trigger: GTTAAGGCATGCTAAATTGCAGAAGACAGGTGTAGA...AGAGAACAGGCAAAGCACCCCTACTTCTTGGGAAATAAATTCCAGCCCAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CCA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAAGTGGGCCACCATGCCTaGTCGATGGTTTTATCTTTA +
Preference number: 2 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKVGHHA*SMVLSL
Trigger: TAAAGATAAAACCATCGACCAGGCATGGTGGCCCAC...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CCA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTGGTCACATTTTGAGGTaGTGGGGGTTAAGACTTCAA +
Preference number: 2 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPGHILR*WGLRLQ
Trigger: TTGAAGTCTTAACCCCCACCACCTCAAAATGTGACC...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CCA 90 bp CATGCCTTAACTTGTGCTGTACATGGCTTACATAGTTTATTACCTACCAGACAGAGGTGTACTTTCCGTTaGGTTAACAGTTCCAGAGGT +
Preference number: 2 (lower is better)
Translates to: HALTCAVHGLHSLLPTRQRCTFR*VNSSRG
Trigger: ACCTCTGGAACTGTTAACCCAACGGAAAGTACACCT...CTGTCTGGTAGGTAATAAACTATGTAAGCCATGTACAGCACAAGTTAAGGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CCA 90 bp GCAATCCAATGTAGTCATGATCTGCCACTACTGAACCTTGCAAGAGATAAAGACATCATCCCAATTGTTTaGGTGGTCAGCACAGTGTTT +
Preference number: 2 (lower is better)
Translates to: AIQCSHDLPLLNLARDKDIIPIV*VVSTVF
Trigger: AAACACTGTGCTGACCACCCAAACAATTGGGATGAT...GTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCATGACTACATTGGATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR TCA 90 bp AGATTTGGGCTGGAATTTATTTCCCAAGAAGTAGGGGTGCTTTGCCTGTTCTCTAAGGTCAAGCTTAAATaGTCCTTCTTCCATAAGGAT +
Preference number: 2 (lower is better)
Translates to: RFGLEFISQEVGVLCLFSKVKLK*SFFHKD
Trigger: ATCCTTATGGAAGAAGGATCATTTAAGCTTGACCTT...AGAGAACAGGCAAAGCACCCCTACTTCTTGGGAAATAAATTCCAGCCCAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR TCA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTCTCCATCTGGCCCAGTaGAGTTGTCTTATTCTCCAT +
Preference number: 2 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTLHLAQ*SCLILH
Trigger: ATGGAGAATAAGACAACTTCACTGGGCCAGATGGAG...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR TCA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCACCAGAATATTTGCTTaGTATGCTCCAATCGGAATT +
Preference number: 2 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPTRIFA*YAPIGI
Trigger: AATTCCGATTGGAGCATATCAAGCAAATATTCTGGT...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CCA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTGTGGGCCACCATGCCTaGTCGATGGTTTTATCTTTA +
Preference number: 2 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTVGHHA*SMVLSL
Trigger: TAAAGATAAAACCATCGACCAGGCATGGTGGCCCAC...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CCA 90 bp CATGCCTTAACTTGTGCTGTACATGGCTTACATAGTTTATTACCTACCAGACAGATTGTCTCACAGTTCTaGAGGCAAAAGTCTGAGATA +
Preference number: 2 (lower is better)
Translates to: HALTCAVHGLHSLLPTRQIVSQF*RQKSEI
Trigger: TATCTCAGACTTTTGCCTCCAGAACTGTGAGACAAT...CTGTCTGGTAGGTAATAAACTATGTAAGCCATGTACAGCACAAGTTAAGGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR TCA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTGAAACAGCTGATAGGTaGTCATCCCAATTGTTTGGG +
Preference number: 2 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLETADR*SSQLFG
Trigger: CCCAAACAATTGGGATGATCACCTATCAGCTGTTTC...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR TCA 90 bp AAAAACAACTTCTCTCTTTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCAAGAGTCCAACAGACTaGAAGTCTGCTTTTCAAGAG +
Preference number: 2 (lower is better)
Translates to: KNNFSLFASLSTLSTPVFKSPTD*KSAFQE
Trigger: CTCTTGAAAAGCAGACTTTCAGTCTGTTGGACTCTT...GAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR GCA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTCAACTTCTCTCTTTTTaGCTCCCTAAGTACATTATC +
Preference number: 2 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPQLLSF*LPKYII
Trigger: GATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTG...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR GCA 90 bp CATGCCTTAACTTGTGCTGTACATGGCTTACATAGTTTATTACCTACCAGACAGTATCCCTCATTATCTTaGTTCTTCACTTTATACCCG +
Preference number: 2 (lower is better)
Translates to: HALTCAVHGLHSLLPTRQYPSLS*FFTLYP
Trigger: CGGGTATAAAGTGAAGAAGCAAGATAATGAGGGATA...CTGTCTGGTAGGTAATAAACTATGTAAGCCATGTACAGCACAAGTTAAGGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CCA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTTTGTTGTTCTCCATCTaGCCCAGTGAAGTTGTCTTA +
Preference number: 2 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTLLFSI*PSEVVL
Trigger: TAAGACAACTTCACTGGGCCAGATGGAGAACAACAA...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR CAA 90 bp ATTATCGACTATACCAATAGTTGCATCTTCCACCAGAATATTTGCTaGATATGCTCCAATCGGAATTTCAGGCAATCCAATGTAGTCATG +
Preference number: 2 (lower is better)
Translates to: IIDYTNSCIFHQNIC*ICSNRNFRQSNVVM
Trigger: CATGACTACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGATGCAACTATTGGTATAGTCGATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
3UTR-3UTR TCA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAATGGTCTTCTGAGGAATaGGGAAAAATGTATTCAATG +
Preference number: 2 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKWSSEE*GKMYSM
Trigger: CATTGAATACATTTTTCCTCATTCCTCAGAAGACCA...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR TCA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAAACAGTTCCAGAGGTGTaGGAAATTACAATTTGCTTT +
Preference number: 2 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKTVPEV*EITICF
Trigger: AAAGCAAATTGTAATTTCTCACACCTCTGGAACTGT...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR GCA 90 bp CATGCCTTAACTTGTGCTGTACATGGCTTACATAGTTTATTACCTACCAGACAGATAGTTCACGATCCTTaGTTGATGTCAGTAATTCAT +
Preference number: 2 (lower is better)
Translates to: HALTCAVHGLHSLLPTRQIVHDP*LMSVIH
Trigger: ATGAATTACTGACATCAAGCAAGGATCGTGAACTAT...CTGTCTGGTAGGTAATAAACTATGTAAGCCATGTACAGCACAAGTTAAGGCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR TCA 90 bp AAAAACAACTTCTCTCTTTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCAAGGTCAAGCTTAAATaGTCCTTCTTCCATAAGGAT +
Preference number: 2 (lower is better)
Translates to: KNNFSLFASLSTLSTPVFKVKLK*SFFHKD
Trigger: ATCCTTATGGAAGAAGGATCATTTAAGCTTGACCTT...GAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR GCA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTGACAACAAGAAGCCCTaGCTTTTTATGAATCATTAC +
Preference number: 2 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTDNKKP*LFMNHY
Trigger: GTAATGATTCATAAAAAGGCAGGGCTTCTTGTTGTC...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR GCA 90 bp TTTTGGCAAACATACTTGTATTATCACCATCCACTTCATGAAGACTATCTGAAGATACATGACTTCTGTTaGTTGTATGAAAAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: FWQTYLYYHHPLHEDYLKIHDFC*LYEKAP
Trigger: TGGGGCCTTTTCATACAAGCAACAGAAGTCATGTAT...CTTCAGATAGTCTTCATGAAGTGGATGGTGATAATACAAGTATGTTTGCCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR GCA 90 bp TTTCTGTTGAATGAATTCATCTCTTTGGTCCATTATTATTTTCTGAGGAGGTCCATACATGACTTCTGTTaGTTGTATGAAAAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: FLLNEFISLVHYYFLRRSIHDFC*LYEKAP
Trigger: TGGGGCCTTTTCATACAAGCAACAGAAGTCATGTAT...GGACCTCCTCAGAAAATAATAATGGACCAAAGAGATGAATTCATTCAACAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513747.1
3UTR-3UTR GCA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTCAACTTCTCTCTTTTTaGCTCCCTAAGTACATTATC +
Preference number: 2 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLQLLSF*LPKYII
Trigger: GATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTG...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CAA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCTTGTTGAGACAGGTCTaGCCCTGTCGCCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPLLRQV*PCRPGW
Trigger: CCAGCCTGGGCGACAGGGCAAGACCTGTCTCAACAA...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CAA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTTTGTTGAGACAGGTCTaGCCCTGTCGCCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLLLRQV*PCRPGW
Trigger: CCAGCCTGGGCGACAGGGCAAGACCTGTCTCAACAA...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CAA 90 bp CTCCAATCGGAATTTCAGGCAATCCAATGTAGTCATGATCTGCCACTACTGAACGATCATCCCAATTGTTaGGGTGGTCAGCACAGTGTT +
Preference number: 3 (lower is better)
Translates to: LQSEFQAIQCSHDLPLLNDHPNC*GGQHSV
Trigger: AACACTGTGCTGACCACCCAAACAATTGGGATGATC...GTTCAGTAGTGGCAGATCATGACTACATTGGATTGCCTGAAATTCCGATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CAA 90 bp TTCAGTCTAACCCCAGTGTTGTCTCTCAGGACAGCACATCCACTTTCTGTAATACATGACTTCTGTTGCTaGTATGAAAAGGCCCCATCA +
Preference number: 3 (lower is better)
Translates to: FSLTPVLSLRTAHPLSVIHDFCC*YEKAPS
Trigger: TGATGGGGCCTTTTCATACAAGCAACAGAAGTCATG...TATTACAGAAAGTGGATGTGCTGTCCTGAGAGACAACACTGGGGTTAGACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR GCA 72 bp ATTGTTTGGGTGGTCAGCACAGTGTTTGGAGAGAAATaGTTTGATTGTGTTAGGTGTACTTTCCGTTGGGTT +
Preference number: 3 (lower is better)
Translates to: IVWVVSTVFGEK*FDCVRCTFRWV
Trigger: AACCCAACGGAAAGTACACCTAACACAATCAAAGCATTTCTCTCCAAACACTGTGCTGACCACCCAAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CAA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCAAAGGTTTGAGAGATTaGGGCTGGAATTTATTTCCC +
Preference number: 3 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPKGLRD*GWNLFP
Trigger: GGGAAATAAATTCCAGCCCAAATCTCTCAAACCTTT...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CAA 90 bp GCAATCCAATGTAGTCATGATCTGCCACTACTGAACCTTGCAAGAGATAAAGACTGGTCAGCACAGTGTTaGGAGAGAAATGCTTTGATT +
Preference number: 3 (lower is better)
Translates to: AIQCSHDLPLLNLARDKDWSAQC*ERNALI
Trigger: AATCAAAGCATTTCTCTCCAAACACTGTGCTGACCA...GTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCATGACTACATTGGATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CAA 90 bp GATCTGCCACTACTGAACCTTGCAAGAGATAAAGACTTTCTGTTGAATGAATTCCATGACTTCTGTTGCTaGTATGAAAAGGCCCCATCA +
Preference number: 3 (lower is better)
Translates to: DLPLLNLARDKDFLLNEFHDFCC*YEKAPS
Trigger: TGATGGGGCCTTTTCATACAAGCAACAGAAGTCATG...GAATTCATTCAACAGAAAGTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513747.1
3UTR-3UTR CAA 90 bp GCAATCCAATGTAGTCATGATCTGCCACTACTGAACCTTGCAAGAGATAAAGACTCTGGCCCAGTGAAGTaGTCTTATTCTCCATTATTT +
Preference number: 3 (lower is better)
Translates to: AIQCSHDLPLLNLARDKDSGPVK*SYSPLF
Trigger: AAATAATGGAGAATAAGACAACTTCACTGGGCCAGA...GTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCATGACTACATTGGATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CAA 90 bp ATCCCTCATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGCACCAGAATATTTGCTaGATATGCTCCAATCGGAAT +
Preference number: 3 (lower is better)
Translates to: IPHYLASSLYTRGSVDNKHQNIC*ICSNRN
Trigger: ATTCCGATTGGAGCATATCAAGCAAATATTCTGGTG...CTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATGAGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CAA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTCTTCCACCAGAATATTaGCTTGATATGCTCCAATCG +
Preference number: 3 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPLPPEY*LDMLQS
Trigger: CGATTGGAGCATATCAAGCAAATATTCTGGTGGAAG...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CAA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAAAGAAGTAGGGGTGCTTaGCCTGTTCTCTTTTTAGAA +
Preference number: 3 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKRSRGA*PVLFLE
Trigger: TTCTAAAAAGAGAACAGGCAAAGCACCCCTACTTCT...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CAA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTCTTTTGTTGTTGTTGTaGAGACAGGTCTTGCCCTGT +
Preference number: 3 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTLLLLL*RQVLPC
Trigger: ACAGGGCAAGACCTGTCTCAACAACAACAACAAAAG...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CAA 90 bp ATCCCTCATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAATAGTTCACGATCCTaGCTTGATGTCAGTAATTCA +
Preference number: 3 (lower is better)
Translates to: IPHYLASSLYTRGSVDNKNSSRS*LDVSNS
Trigger: TGAATTACTGACATCAAGCAAGGATCGTGAACTATT...CTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATGAGGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR TCA 72 bp GGTGTACTTTCCGTTGGGTTAACAGTTCCAGAGGTGTaGGAAATTACAATTTGCTTTATGCCAAACAATCTG +
Preference number: 3 (lower is better)
Translates to: GVLSVGLTVPEV*EITICFMPNNL
Trigger: CAGATTGTTTGGCATAAAGCAAATTGTAATTTCTCACACCTCTGGAACTGTTAACCCAACGGAAAGTACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR GCA 72 bp GACTATACCAATAGTTGCATCTTCCACCAGAATATTTaGTTGATATGCTCCAATCGGAATTTCAGGCAATCC +
Preference number: 3 (lower is better)
Translates to: DYTNSCIFHQNI*LICSNRNFRQS
Trigger: GGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGATGCAACTATTGGTATAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
3UTR-3UTR CAA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAATCTCCCCTAATTCTTTaGTATCCATTTACCAAATCC +
Preference number: 3 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQSPLIL*YPFTKS
Trigger: GGATTTGGTAAATGGATACAAAAGAATTAGGGGAGA...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR GCA 72 bp AATAGTTGCATCTTCCACCAGAATATTTGCTTGATATaGTCCAATCGGAATTTCAGGCAATCCAATGTAGTC +
Preference number: 3 (lower is better)
Translates to: NSCIFHQNICLI*SNRNFRQSNVV
Trigger: GACTACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGATGCAACTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
3UTR CCA 72 bp GAGAAATGCTTTGATTGTGTTAGGTGTACTTTCCGTTaGGTTAACAGTTCCAGAGGTGTGAGAAATTACAAT +
Preference number: 3 (lower is better)
Translates to: EKCFDCVRCTFR*VNSSRGVRNYN
Trigger: ATTGTAATTTCTCACACCTCTGGAACTGTTAACCCAACGGAAAGTACACCTAACACAATCAAAGCATTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
3UTR-3UTR CAA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTACTTCAACACAAATTTaGGGAGGGGCACATATCAAT +
Preference number: 3 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTTSTQI*GGAHIN
Trigger: ATTGATATGTGCCCCTCCCAAAATTTGTGTTGAAGT...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CAA 90 bp AAAAACAACTTCTCTCTTTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCCACATGGCATTCTCCTaGAGTCTGTGTTCAAATTTT +
Preference number: 3 (lower is better)
Translates to: KNNFSLFASLSTLSTPVFHMAFS*SLCSNF
Trigger: AAAATTTGAACACAGACTCAAGGAGAATGCCATGTG...GAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR GCA 72 bp CTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCTaGCTTTTTATGAATCATTACAATACTTTTCCATTT +
Preference number: 3 (lower is better)
Translates to: LYTRGSVDNKKP*LFMNHYNTFPF
Trigger: AAATGGAAAAGTATTGTAATGATTCATAAAAAGGCAGGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CAA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTAAACCATACAAAGGTTaGAGAGATTTGGGCTGGAAT +
Preference number: 3 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLKPYKG*RDLGWN
Trigger: ATTCCAGCCCAAATCTCTCAAACCTTTGTATGGTTT...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CAA 90 bp AAAAACAACTTCTCTCTTTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTTATCCCTCATTATCTaGCTTCTTCACTTTATACCC +
Preference number: 3 (lower is better)
Translates to: KNNFSLFASLSTLSTPVFLSLII*LLHFIP
Trigger: GGGTATAAAGTGAAGAAGCAAGATAATGAGGGATAA...GAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CAA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTAACAATAGAATTTTATaGTCTCACAGTTCTGGAGGC +
Preference number: 3 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTNNRIL*SHSSGG
Trigger: GCCTCCAGAACTGTGAGACAATAAAATTCTATTGTT...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR-3UTR CAA 90 bp ATAAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCATTATCCCTCATTATCTaGCTTCTTCACTTTATACCC +
Preference number: 3 (lower is better)
Translates to: IRFPTYLFSFIPHYLASSLSLII*LLHFIP
Trigger: GGGTATAAAGTGAAGAAGCAAGATAATGAGGGATAA...TGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR TCA 72 bp ACTTGTATTATCACCATCCACTTCATGAAGACTATCTaGAGTCTCAGGCATATAAGGATTTCGACTAAACAT +
Preference number: 3 (lower is better)
Translates to: TCIITIHFMKTI*SLRHIRISTKH
Trigger: ATGTTTAGTCGAAATCCTTATATGCCTGAGACTTCAGATAGTCTTCATGAAGTGGATGGTGATAATACAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CCA 90 bp ATCCCTCATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGCAGGCTGGAGAGCTGTaGCATGAGCGCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IPHYLASSLYTRGSVDNKQAGEL*HERGSL
Trigger: CAGTGAGCCGCGCTCATGCCACAGCTCTCCAGCCTG...CTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATGAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCGCAGCCTCGACCTCCTaGGGTCAAGCAATGCTCCTA +
Preference number: 4 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPAASTS*GQAMLL
Trigger: TAGGAGCATTGCTTGACCCCAGGAGGTCGAGGCTGC...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCACTCCTGGGGTCAAGTaGTCATCCTGCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPTPGVK*SSCLGF
Trigger: GAAGCCAAGGCAGGATGATCACTTGACCCCAGGAGT...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp CACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCAATGTACAGGCTGGAGAGCTGTaGCATGAGCGCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HQNICLICSNRNFRQSNVQAGEL*HERGSL
Trigger: CAGTGAGCCGCGCTCATGCCACAGCTCTCCAGCCTG...TACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CCA 90 bp CATGCCTTAACTTGTGCTGTACATGGCTTACATAGTTTATTACCTACCAGACAGGCAGCCTCGACCTCCTaGGGTCAAGCAATGCTCCTA +
Preference number: 4 (lower is better)
Translates to: HALTCAVHGLHSLLPTRQAASTS*GQAMLL
Trigger: TAGGAGCATTGCTTGACCCCAGGAGGTCGAGGCTGC...CTGTCTGGTAGGTAATAAACTATGTAAGCCATGTACAGCACAAGTTAAGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTACTCCTGGGGTCAAGTaGTCATCCTGCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPTPGVK*SSCLGF
Trigger: GAAGCCAAGGCAGGATGATCACTTGACCCCAGGAGT...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCCTCCATCTGGCCCAGTaGAGTTGTCTTATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPLHLAQ*SCLILH
Trigger: ATGGAGAATAAGACAACTTCACTGGGCCAGATGGAG...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCGTGGGCCACCATGCCTaGTCGATGGTTTTATCTTTA +
Preference number: 4 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPVGHHA*SMVLSL
Trigger: TAAAGATAAAACCATCGACCAGGCATGGTGGCCCAC...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCGAAACAGCTGATAGGTaGTCATCCCAATTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPETADR*SSQLFG
Trigger: CCCAAACAATTGGGATGATCACCTATCAGCTGTTTC...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp GCAATCCAATGTAGTCATGATCTGCCACTACTGAACCTTGCAAGAGATAAAGACTCCCAATTGTTTGGGTaGTCAGCACAGTGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: AIQCSHDLPLLNLARDKDSQLFG*SAQCLE
Trigger: CTCCAAACACTGTGCTGACCACCCAAACAATTGGGA...GTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCATGACTACATTGGATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CCA 90 bp AGATTTGGGCTGGAATTTATTTCCCAAGAAGTAGGGGTGCTTTGCCTGTTCTCTGGTCACATTTTGAGGTaGTGGGGGTTAAGACTTCAA +
Preference number: 4 (lower is better)
Translates to: RFGLEFISQEVGVLCLFSGHILR*WGLRLQ
Trigger: TTGAAGTCTTAACCCCCACCACCTCAAAATGTGACC...AGAGAACAGGCAAAGCACCCCTACTTCTTGGGAAATAAATTCCAGCCCAAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAAGCCACTTGGCAATGCTaGCAAGCATATACCCACTGT +
Preference number: 4 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKATWQC*QAYTHC
Trigger: ACAGTGGGTATATGCTTGTCAGCATTGCCAAGTGGC...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399004.7
CDS-3UTR TCA 90 bp ATCCCTCATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGCTTCTGTTGCTTGTATaGAAAGGCCCCATCAGATCA +
Preference number: 4 (lower is better)
Translates to: IPHYLASSLYTRGSVDNKLLLLV*KGPIRS
Trigger: TGATCTGATGGGGCCTTTTCATACAAGCAACAGAAG...CTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATGAGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCATCATCCCAATTGTTTaGGTGGTCAGCACAGTGTTT +
Preference number: 4 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPIIPIV*VVSTVF
Trigger: AAACACTGTGCTGACCACCCAAACAATTGGGATGAT...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp TTTTGGCAAACATACTTGTATTATCACCATCCACTTCATGAAGACTATCTGAAGGTGATCATCCTGCCTTaGCTTCCCAAAGCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: FWQTYLYYHHPLHEDYLKVIILP*LPKALG
Trigger: TCCCAGCGCTTTGGGAAGCCAAGGCAGGATGATCAC...CTTCAGATAGTCTTCATGAAGTGGATGGTGATAATACAAGTATGTTTGCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR TCA 90 bp CACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCAATGTATGGATTCTACCAGAGTaGGGGTCCTGGATATACCAT +
Preference number: 4 (lower is better)
Translates to: HQNICLICSNRNFRQSNVWILPE*GSWIYH
Trigger: ATGGTATATCCAGGACCCTCACTCTGGTAGAATCCA...TACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508629.5
CDS-3UTR TCA 90 bp CATCTTCCACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCTTCTGTTGCTTGTATaGAAAGGCCCCATCAGATCA +
Preference number: 4 (lower is better)
Translates to: HLPPEYLLDMLQSEFQAILLLLV*KGPIRS
Trigger: TGATCTGATGGGGCCTTTTCATACAAGCAACAGAAG...GATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR TCA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTGAAACAGCTGATAGGTaGTCATCCCAATTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPETADR*SSQLFG
Trigger: CCCAAACAATTGGGATGATCACCTATCAGCTGTTTC...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp ATCCCTCATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGTCACCATCCACTTCATaGAGACTATCTGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: IPHYLASSLYTRGSVDNKSPSTS*RLSEVS
Trigger: TGAGACTTCAGATAGTCTTCATGAAGTGGATGGTGA...CTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATGAGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp AAAAACAACTTCTCTCTTTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCCCAACCCATTCAGACTaGAAACGACCATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KNNFSLFASLSTLSTPVFPTHSD*KRPSFH
Trigger: GTGGAAGGATGGTCGTTTTCAGTCTGAATGGGTTGG...GAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCAACCATACAAAGGTTTaGGAGATTTGGGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPNHTKV*EIWAGI
Trigger: AATTCCAGCCCAAATCTCTCAAACCTTTGTATGGTT...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCACATGGCATTCTCCTTaGGTCTGTGTTCAAATTTTC +
Preference number: 4 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPTWHSP*VCVQIF
Trigger: GAAAATTTGAACACAGACTCAAGGAGAATGCCATGT...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAAGCCACTTGGCAATGCTaGCAAGCATATACCTTTGAA +
Preference number: 4 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQATWQC*QAYTFE
Trigger: TTCAAAGGTATATGCTTGTCAGCATTGCCAAGTGGC...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR GCA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTTTGCTGCTCTTCTTATaGCACTTCTCTCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPLLLFL*HFSHLA
Trigger: TGCCAAGTGAGAGAAGTGGCATAAGAAGAGCAGCAA...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR GCA 90 bp ATCTTCCACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCTTGCTGCTCTTCTTATaGCACTTCTCTCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: IFHQNICLICSNRNFRQSLLLFL*HFSHLA
Trigger: TGCCAAGTGAGAGAAGTGGCATAAGAAGAGCAGCAA...GGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR GCA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAATCCACCTTGAGAAGGTaGTGTTTCGGTGCTACAATA +
Preference number: 4 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQSTLRR*CFGATI
Trigger: TATTGTAGCACCGAAACAGCACCTTCTCAAGGTGGA...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR GCA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCTTCCACCAGAATATTTaGTTGATATGCTCCAATCGG +
Preference number: 4 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPFHQNI*LICSNR
Trigger: CCGATTGGAGCATATCAAGCAAATATTCTGGTGGAA...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR GCA 90 bp CTCCAATCGGAATTTCAGGCAATCCAATGTAGTCATGATCTGCCACTACTGAACTTCCACCAGAATATTTaGTTGATATGCTCCAATCGG +
Preference number: 4 (lower is better)
Translates to: LQSEFQAIQCSHDLPLLNFHQNI*LICSNR
Trigger: CCGATTGGAGCATATCAAGCAAATATTCTGGTGGAA...GTTCAGTAGTGGCAGATCATGACTACATTGGATTGCCTGAAATTCCGATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR GCA 90 bp ACTGAAAGTCTGCTTTTCAAGAGAACTATGATCGTCTATCAATGGAGAGATTTTAGGTGTGGGCCACCATaGCTGGTCGATGGTTTTATC +
Preference number: 4 (lower is better)
Translates to: TESLLFKRTMIVYQWRDFRCGPP*LVDGFI
Trigger: GATAAAACCATCGACCAGGCATGGTGGCCCACACCT...AAAATCTCTCCATTGATAGACGATCATAGTTCTCTTGAAAAGCAGACTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CCA 90 bp CATCTTCCACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCAGGTGTACTTTCCGTTaGGTTAACAGTTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: HLPPEYLLDMLQSEFQAIRCTFR*VNSSRG
Trigger: ACCTCTGGAACTGTTAACCCAACGGAAAGTACACCT...GATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CCA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAATCCCAATTGTTTGGGTaGTCAGCACAGTGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKSQLFG*SAQCLE
Trigger: CTCCAAACACTGTGCTGACCACCCAAACAATTGGGA...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp GATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCAGAATACTGGTCTCGAACTCCTaGGGTCAAGTGATCATCCTG +
Preference number: 4 (lower is better)
Translates to: DVSNSLSTIPIVASSTRILVSNS*GQVIIL
Trigger: CAGGATGATCACTTGACCCCAGGAGTTCGAGACCAG...TATTCTGGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR TCA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAAACTTGGCAGTGTAGTTaGATGATATTCACCAGTTCG +
Preference number: 4 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQTWQCS*MIFTSS
Trigger: CGAACTGGTGAATATCATTCAACTACACTGCCAAGT...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAACATATACCCACTGTTTaGCATCATTGGTCACAGATG +
Preference number: 4 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQHIPTV*HHWSQM
Trigger: CATCTGTGACCAATGATGTCAAACAGTGGGTATATG...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399004.7
CDS-3UTR TCA 90 bp GGAGAGATTTTCGTATTTCTATATTCTAATAGTTCACGATCCTTGCTTGATGTCGCCACTTGGCAATGCTaGCAAGCATATACCCACTGT +
Preference number: 4 (lower is better)
Translates to: GEIFVFLYSNSSRSLLDVATWQC*QAYTHC
Trigger: ACAGTGGGTATATGCTTGTCAGCATTGCCAAGTGGC...GACATCAAGCAAGGATCGTGAACTATTAGAATATAGAAATACGAAAATCTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508629.5
CDS-3UTR TCA 90 bp CATGATCTGCCACTACTGAACCTTGCAAGAGATAAAGACTTTCTGTTGAATGAACTTCTGTTGCTTGTATaGAAAGGCCCCATCAGATCA +
Preference number: 4 (lower is better)
Translates to: HDLPLLNLARDKDFLLNELLLLV*KGPIRS
Trigger: TGATCTGATGGGGCCTTTTCATACAAGCAACAGAAG...TTCATTCAACAGAAAGTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513747.1
CDS-3UTR TCA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAACCAAGTGAGTTACATTaGAGGCAAATGAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQPSELH*RQMKQL
Trigger: CAGCTGTTTCATTTGCCTTCAATGTAACTCACTTGG...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTTCACCATCCACTTCATaGAGACTATCTGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPSPSTS*RLSEVS
Trigger: TGAGACTTCAGATAGTCTTCATGAAGTGGATGGTGA...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp ATAAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACCAACCCATTCAGACTaGAAACGACCATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: IRFPTYLFSFIPHYLASSPTHSD*KRPSFH
Trigger: GTGGAAGGATGGTCGTTTTCAGTCTGAATGGGTTGG...TGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp CATGCCTTAACTTGTGCTGTACATGGCTTACATAGTTTATTACCTACCAGACAGATGATCTGCCACTACTaGACCTTGCAAGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: HALTCAVHGLHSLLPTRQMICHY*TLQEIK
Trigger: CTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCAT...CTGTCTGGTAGGTAATAAACTATGTAAGCCATGTACAGCACAAGTTAAGGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTAAGAGTCCAACAGACTaGAAGTCTGCTTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPKSPTD*KSAFQE
Trigger: CTCTTGAAAAGCAGACTTTCAGTCTGTTGGACTCTT...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp ATCTTCCACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCAAGAGTCCAACAGACTaGAAGTCTGCTTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: IFHQNICLICSNRNFRQSKSPTD*KSAFQE
Trigger: CTCTTGAAAAGCAGACTTTCAGTCTGTTGGACTCTT...GGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR TCA 90 bp CATCTTCCACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCTTCAAGAACCTGGTTTaGAGAGTCCAACAGACTGAA +
Preference number: 4 (lower is better)
Translates to: HLPPEYLLDMLQSEFQAIFKNLV*RVQQTE
Trigger: TTCAGTCTGTTGGACTCTTCAAACCAGGTTCTTGAA...GATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR TCA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTTTCAAGAACCTGGTTTaGAGAGTCCAACAGACTGAA +
Preference number: 4 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPFKNLV*RVQQTE
Trigger: TTCAGTCTGTTGGACTCTTCAAACCAGGTTCTTGAA...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp GCTGAAACATCACATAGAGGCAAAATCACAATCCATTTGGTGAACAAATCTGTCGCCACTTGGCAATGCTaGCAAGCATATACCTTTGAA +
Preference number: 4 (lower is better)
Translates to: AETSHRGKITIHLVNKSVATWQC*QAYTFE
Trigger: TTCAAAGGTATATGCTTGTCAGCATTGCCAAGTGGC...GACAGATTTGTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512248.5
ENST00000513747.1
CDS-3UTR GCA 90 bp CATGATCTGCCACTACTGAACCTTGCAAGAGATAAAGACTTTCTGTTGAATGAATCCACCTTGAGAAGGTaGTGTTTCGGTGCTACAATA +
Preference number: 4 (lower is better)
Translates to: HDLPLLNLARDKDFLLNESTLRR*CFGATI
Trigger: TATTGTAGCACCGAAACAGCACCTTCTCAAGGTGGA...TTCATTCAACAGAAAGTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513747.1
CDS-3UTR GCA 90 bp CTCCAATCGGAATTTCAGGCAATCCAATGTAGTCATGATCTGCCACTACTGAACCAACTTCTCTCTTTTTaGCTCCCTAAGTACATTATC +
Preference number: 4 (lower is better)
Translates to: LQSEFQAIQCSHDLPLLNQLLSF*LPKYII
Trigger: GATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTG...GTTCAGTAGTGGCAGATCATGACTACATTGGATTGCCTGAAATTCCGATTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR GCA 90 bp AGATTTGGGCTGGAATTTATTTCCCAAGAAGTAGGGGTGCTTTGCCTGTTCTCTGACAACAAGAAGCCCTaGCTTTTTATGAATCATTAC +
Preference number: 4 (lower is better)
Translates to: RFGLEFISQEVGVLCLFSDNKKP*LFMNHY
Trigger: GTAATGATTCATAAAAAGGCAGGGCTTCTTGTTGTC...AGAGAACAGGCAAAGCACCCCTACTTCTTGGGAAATAAATTCCAGCCCAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp ACTTCTGATGCTGAAACATCACATAGAGGCAAAATCACAATCCATTTGGTGAACGGCAGTGTAGTTGAATaGTATTCACCAGTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: TSDAETSHRGKITIHLVNGSVVE*YSPVRL
Trigger: CAAACGAACTGGTGAATATCATTCAACTACACTGCC...GTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGCATCAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512248.5
ENST00000513747.1
CDS-3UTR TCA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTTGGATTCTACCAGAGTaGGGGTCCTGGATATACCAT +
Preference number: 4 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLWILPE*GSWIYH
Trigger: ATGGTATATCCAGGACCCTCACTCTGGTAGAATCCA...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399004.7
CDS-3UTR TCA 90 bp GCAATCCAATGTAGTCATGATCTGCCACTACTGAACCTTGCAAGAGATAAAGACACAGTTCCAGAGGTGTaGGAAATTACAATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: AIQCSHDLPLLNLARDKDTVPEV*EITICF
Trigger: AAAGCAAATTGTAATTTCTCACACCTCTGGAACTGT...GTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCATGACTACATTGGATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR TCA 90 bp GCTGAAACATCACATAGAGGCAAAATCACAATCCATTTGGTGAACAAATCTGTCATGATCTGCCACTACTaGACCTTGCAAGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: AETSHRGKITIHLVNKSVMICHY*TLQEIK
Trigger: CTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCAT...GACAGATTTGTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512248.5
ENST00000513747.1
CDS-3UTR TCA 90 bp GCTGAAACATCACATAGAGGCAAAATCACAATCCATTTGGTGAACAAATCTGTCAAGAGTCCAACAGACTaGAAGTCTGCTTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: AETSHRGKITIHLVNKSVKSPTD*KSAFQE
Trigger: CTCTTGAAAAGCAGACTTTCAGTCTGTTGGACTCTT...GACAGATTTGTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR TCA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAATTCAAGAACCTGGTTTaGAGAGTCCAACAGACTGAA +
Preference number: 4 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKFKNLV*RVQQTE
Trigger: TTCAGTCTGTTGGACTCTTCAAACCAGGTTCTTGAA...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR GCA 90 bp TTGCTTGATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCTTGCTGCTCTTCTTATaGCACTTCTCTCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLDVSNSLSTIPIVASSTLLLFL*HFSHLA
Trigger: TGCCAAGTGAGAGAAGTGGCATAAGAAGAGCAGCAA...GGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATCAAGCAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR GCA 90 bp AATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCAATGTAGTCATGTCCACCTTGAGAAGGTaGTGTTTCGGTGCTACAATA +
Preference number: 4 (lower is better)
Translates to: NICLICSNRNFRQSNVVMSTLRR*CFGATI
Trigger: TATTGTAGCACCGAAACAGCACCTTCTCAAGGTGGA...CATGACTACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR GCA 90 bp AGATTTGGGCTGGAATTTATTTCCCAAGAAGTAGGGGTGCTTTGCCTGTTCTCTAATATTTGCTTGATATaGTCCAATCGGAATTTCAGG +
Preference number: 4 (lower is better)
Translates to: RFGLEFISQEVGVLCLFSNICLI*SNRNFR
Trigger: CCTGAAATTCCGATTGGAGCATATCAAGCAAATATT...AGAGAACAGGCAAAGCACCCCTACTTCTTGGGAAATAAATTCCAGCCCAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTAGGTGTACTTTCCGTTaGGTTAACAGTTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTRCTFR*VNSSRG
Trigger: ACCTCTGGAACTGTTAACCCAACGGAAAGTACACCT...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp ACTTCTGATGCTGAAACATCACATAGAGGCAAAATCACAATCCATTTGGTGAACTTGTTGTTCTCCATCTaGCCCAGTGAAGTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: TSDAETSHRGKITIHLVNLLFSI*PSEVVL
Trigger: TAAGACAACTTCACTGGGCCAGATGGAGAACAACAA...GTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGCATCAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CCA 90 bp ACTGAAAGTCTGCTTTTCAAGAGAACTATGATCGTCTATCAATGGAGAGATTTTGTGGGCCACCATGCCTaGTCGATGGTTTTATCTTTA +
Preference number: 4 (lower is better)
Translates to: TESLLFKRTMIVYQWRDFVGHHA*SMVLSL
Trigger: TAAAGATAAAACCATCGACCAGGCATGGTGGCCCAC...AAAATCTCTCCATTGATAGACGATCATAGTTCTCTTGAAAAGCAGACTTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CCA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTGGTCACATTTTGAGGTaGTGGGGGTTAAGACTTCAA +
Preference number: 4 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTGHILR*WGLRLQ
Trigger: TTGAAGTCTTAACCCCCACCACCTCAAAATGTGACC...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp AAAAACAACTTCTCTCTTTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCGGCAGTGTAGTTGAATaGTATTCACCAGTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: KNNFSLFASLSTLSTPVFGSVVE*YSPVRL
Trigger: CAAACGAACTGGTGAATATCATTCAACTACACTGCC...GAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp TTGCTTGATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCGGCAGTGTAGTTGAATaGTATTCACCAGTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: LLDVSNSLSTIPIVASSTGSVVE*YSPVRL
Trigger: CAAACGAACTGGTGAATATCATTCAACTACACTGCC...GGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATCAAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR TCA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTGGCAGTGTAGTTGAATaGTATTCACCAGTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTGSVVE*YSPVRL
Trigger: CAAACGAACTGGTGAATATCATTCAACTACACTGCC...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp TTGGTATTTACTAACTTAAGTATTCAAGAACCTGGTTTGAAGAGTCCAACAGACCTTCTGTTGCTTGTATaGAAAGGCCCCATCAGATCA +
Preference number: 4 (lower is better)
Translates to: LVFTNLSIQEPGLKSPTDLLLLV*KGPIRS
Trigger: TGATCTGATGGGGCCTTTTCATACAAGCAACAGAAG...GTCTGTTGGACTCTTCAAACCAGGTTCTTGAATACTTAAGTTAGTAAATACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR TCA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAATTAGTAGGTTCCAAGTaGGTTACATTGAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQLVGSK*VTLKAN
Trigger: ATTTGCCTTCAATGTAACTCACTTGGAACCTACTAA...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp AATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCAATGTAGTCATGATGATCTGCCACTACTaGACCTTGCAAGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: NICLICSNRNFRQSNVVMMICHY*TLQEIK
Trigger: CTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCAT...CATGACTACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR TCA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAATGGTCTTCTGAGGAATaGGGAAAAATGTATTCAATG +
Preference number: 4 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQWSSEE*GKMYSM
Trigger: CATTGAATACATTTTTCCTCATTCCTCAGAAGACCA...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp GTTAGGTGTACTTTCCGTTGGGTTAACAGTTCCAGAGGTGTGAGAAATTACAATTGGTCTTCTGAGGAATaGGGAAAAATGTATTCAATG +
Preference number: 4 (lower is better)
Translates to: VRCTFRWVNSSRGVRNYNWSSEE*GKMYSM
Trigger: CATTGAATACATTTTTCCTCATTCCTCAGAAGACCA...ATTGTAATTTCTCACACCTCTGGAACTGTTAACCCAACGGAAAGTACACCTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR GCA 90 bp TTTCTGTTGAATGAATTCATCTCTTTGGTCCATTATTATTTTCTGAGGAGGTCCTTGCTGCTCTTCTTATaGCACTTCTCTCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: FLLNEFISLVHYYFLRRSLLLFL*HFSHLA
Trigger: TGCCAAGTGAGAGAAGTGGCATAAGAAGAGCAGCAA...GGACCTCCTCAGAAAATAATAATGGACCAAAGAGATGAATTCATTCAACAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513747.1
CDS-3UTR GCA 90 bp GATCTGCCACTACTGAACCTTGCAAGAGATAAAGACTTTCTGTTGAATGAATTCATACATGACTTCTGTTaGTTGTATGAAAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: DLPLLNLARDKDFLLNEFIHDFC*LYEKAP
Trigger: TGGGGCCTTTTCATACAAGCAACAGAAGTCATGTAT...GAATTCATTCAACAGAAAGTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513747.1
CDS-3UTR CCA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAAAAGTATTCAAGAACCTaGTTTGAAGAGTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQKYSRT*FEESNR
Trigger: TCTGTTGGACTCTTCAAACCAGGTTCTTGAATACTT...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAAATTGTCTCACAGTTCTaGAGGCAAAAGTCTGAGATA +
Preference number: 4 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKIVSQF*RQKSEI
Trigger: TATCTCAGACTTTTGCCTCCAGAACTGTGAGACAAT...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp GATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCAGAATACATATACCCACTGTTTaGCATCATTGGTCACAGATG +
Preference number: 4 (lower is better)
Translates to: DVSNSLSTIPIVASSTRIHIPTV*HHWSQM
Trigger: CATCTGTGACCAATGATGTCAAACAGTGGGTATATG...TATTCTGGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508629.5
CDS-3UTR TCA 90 bp TTTTGGCAAACATACTTGTATTATCACCATCCACTTCATGAAGACTATCTGAAGCCAAGTGAGTTACATTaGAGGCAAATGAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: FWQTYLYYHHPLHEDYLKPSELH*RQMKQL
Trigger: CAGCTGTTTCATTTGCCTTCAATGTAACTCACTTGG...CTTCAGATAGTCTTCATGAAGTGGATGGTGATAATACAAGTATGTTTGCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR TCA 90 bp GCTGAAACATCACATAGAGGCAAAATCACAATCCATTTGGTGAACAAATCTGTCTTAGTAGGTTCCAAGTaGGTTACATTGAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: AETSHRGKITIHLVNKSVLVGSK*VTLKAN
Trigger: ATTTGCCTTCAATGTAACTCACTTGGAACCTACTAA...GACAGATTTGTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR TCA 90 bp TTTCTGTTGAATGAATTCATCTCTTTGGTCCATTATTATTTTCTGAGGAGGTCCATGATCTGCCACTACTaGACCTTGCAAGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: FLLNEFISLVHYYFLRRSMICHY*TLQEIK
Trigger: CTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCAT...GGACCTCCTCAGAAAATAATAATGGACCAAAGAGATGAATTCATTCAACAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513747.1
CDS-3UTR TCA 90 bp CACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCAATGTATTTTCAAGAGAACTATaGTCGTCTATCAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: HQNICLICSNRNFRQSNVFSREL*SSINGE
Trigger: CTCTCCATTGATAGACGATCATAGTTCTCTTGAAAA...TACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR TCA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAATTTTCAAGAGAACTATaGTCGTCTATCAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKFSREL*SSINGE
Trigger: CTCTCCATTGATAGACGATCATAGTTCTCTTGAAAA...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR GCA 90 bp CATGCCTTAACTTGTGCTGTACATGGCTTACATAGTTTATTACCTACCAGACAGAAGGTGCTGTTTCGGTaGTACAATAACTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: HALTCAVHGLHSLLPTRQKVLFR*YNNCIF
Trigger: AAAAATACAGTTATTGTAGCACCGAAACAGCACCTT...CTGTCTGGTAGGTAATAAACTATGTAAGCCATGTACAGCACAAGTTAAGGCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR GCA 90 bp GATGCTGAAACATCACATAGAGGCAAAATCACAATCCATTTGGTGAACAAATCTATACATGACTTCTGTTaGTTGTATGAAAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: DAETSHRGKITIHLVNKSIHDFC*LYEKAP
Trigger: TGGGGCCTTTTCATACAAGCAACAGAAGTCATGTAT...AGATTTGTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512248.5
ENST00000513747.1
CDS-3UTR GCA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTATAGTTCACGATCCTTaGTTGATGTCAGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPIVHDP*LMSVIH
Trigger: ATGAATTACTGACATCAAGCAAGGATCGTGAACTAT...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR GCA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTGAAAAATGTATTCAATaGCTCTCCCCTAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTEKCIQ*LSPNFW
Trigger: CCAGAAGTTAGGGGAGAGGCATTGAATACATTTTTC...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR GCA 90 bp TTGCTTGATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCGAAAAATGTATTCAATaGCTCTCCCCTAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLDVSNSLSTIPIVASSTEKCIQ*LSPNFW
Trigger: CCAGAAGTTAGGGGAGAGGCATTGAATACATTTTTC...GGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATCAAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CCA 90 bp CACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCAATGTAAAGTATTCAAGAACCTaGTTTGAAGAGTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: HQNICLICSNRNFRQSNVKYSRT*FEESNR
Trigger: TCTGTTGGACTCTTCAAACCAGGTTCTTGAATACTT...TACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR CCA 90 bp AAAAACAACTTCTCTCTTTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCATTGTCTCACAGTTCTaGAGGCAAAAGTCTGAGATA +
Preference number: 4 (lower is better)
Translates to: KNNFSLFASLSTLSTPVFIVSQF*RQKSEI
Trigger: TATCTCAGACTTTTGCCTCCAGAACTGTGAGACAAT...GAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
3UTR CAA 72 bp TATACCAATAGTTGCATCTTCCACCAGAATATTTGCTaGATATGCTCCAATCGGAATTTCAGGCAATCCAAT +
Preference number: 4 (lower is better)
Translates to: YTNSCIFHQNIC*ICSNRNFRQSN
Trigger: ATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGATGCAACTATTGGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR TCA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTACAGTTCCAGAGGTGTaGGAAATTACAATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTTVPEV*EITICF
Trigger: AAAGCAAATTGTAATTTCTCACACCTCTGGAACTGT...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTTTCATGAAGACTATCTaGAGTCTCAGGCATATAAGG +
Preference number: 4 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLFMKTI*SLRHIR
Trigger: CCTTATATGCCTGAGACTTCAGATAGTCTTCATGAA...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp TTTTGGCAAACATACTTGTATTATCACCATCCACTTCATGAAGACTATCTGAAGTTCATGAAGACTATCTaGAGTCTCAGGCATATAAGG +
Preference number: 4 (lower is better)
Translates to: FWQTYLYYHHPLHEDYLKFMKTI*SLRHIR
Trigger: CCTTATATGCCTGAGACTTCAGATAGTCTTCATGAA...CTTCAGATAGTCTTCATGAAGTGGATGGTGATAATACAAGTATGTTTGCCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR TCA 90 bp AAAAACAACTTCTCTCTTTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTTTTCAAGAGAACTATaGTCGTCTATCAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: KNNFSLFASLSTLSTPVFFSREL*SSINGE
Trigger: CTCTCCATTGATAGACGATCATAGTTCTCTTGAAAA...GAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTAACCATACAAAGGTTTaGGAGATTTGGGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLNHTKV*EIWAGI
Trigger: AATTCCAGCCCAAATCTCTCAAACCTTTGTATGGTT...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp ACTGAAAGTCTGCTTTTCAAGAGAACTATGATCGTCTATCAATGGAGAGATTTTACATGGCATTCTCCTTaGGTCTGTGTTCAAATTTTC +
Preference number: 4 (lower is better)
Translates to: TESLLFKRTMIVYQWRDFTWHSP*VCVQIF
Trigger: GAAAATTTGAACACAGACTCAAGGAGAATGCCATGT...AAAATCTCTCCATTGATAGACGATCATAGTTCTCTTGAAAAGCAGACTTTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR GCA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTATACATGACTTCTGTTaGTTGTATGAAAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLIHDFC*LYEKAP
Trigger: TGGGGCCTTTTCATACAAGCAACAGAAGTCATGTAT...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR GCA 90 bp TTGGTATTTACTAACTTAAGTATTCAAGAACCTGGTTTGAAGAGTCCAACAGACATACATGACTTCTGTTaGTTGTATGAAAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LVFTNLSIQEPGLKSPTDIHDFC*LYEKAP
Trigger: TGGGGCCTTTTCATACAAGCAACAGAAGTCATGTAT...GTCTGTTGGACTCTTCAAACCAGGTTCTTGAATACTTAAGTTAGTAAATACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR GCA 90 bp CACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCAATGTAAATATTTGCTTGATATaGTCCAATCGGAATTTCAGG +
Preference number: 4 (lower is better)
Translates to: HQNICLICSNRNFRQSNVNICLI*SNRNFR
Trigger: CCTGAAATTCCGATTGGAGCATATCAAGCAAATATT...TACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR GCA 90 bp GGAGAGATTTTCGTATTTCTATATTCTAATAGTTCACGATCCTTGCTTGATGTCTTCCACCAGAATATTTaGTTGATATGCTCCAATCGG +
Preference number: 4 (lower is better)
Translates to: GEIFVFLYSNSSRSLLDVFHQNI*LICSNR
Trigger: CCGATTGGAGCATATCAAGCAAATATTCTGGTGGAA...GACATCAAGCAAGGATCGTGAACTATTAGAATATAGAAATACGAAAATCTCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR GCA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTTCTACACCTGTCTTCTaGAATTTAGCATGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLSTPVF*NLACLN
Trigger: GTTAAGGCATGCTAAATTGCAGAAGACAGGTGTAGA...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR GCA 90 bp GATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCAGAATATCTACACCTGTCTTCTaGAATTTAGCATGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: DVSNSLSTIPIVASSTRISTPVF*NLACLN
Trigger: GTTAAGGCATGCTAAATTGCAGAAGACAGGTGTAGA...TATTCTGGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR GCA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTCAACTTCTCTCTTTTTaGCTCCCTAAGTACATTATC +
Preference number: 4 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTQLLSF*LPKYII
Trigger: GATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTG...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp AAAAACAACTTCTCTCTTTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCCTTCTGGTAGTTTTCTaGCAATCTCTGTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: KNNFSLFASLSTLSTPVFLLVVF*QSLSFL
Trigger: AAGAAATGACAGAGATTGCCAGAAAACTACCAGAAG...GAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp TTGCTTGATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCCTTCTGGTAGTTTTCTaGCAATCTCTGTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: LLDVSNSLSTIPIVASSTLLVVF*QSLSFL
Trigger: AAGAAATGACAGAGATTGCCAGAAAACTACCAGAAG...GGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATCAAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR TCA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTACCAGAATATTTGCTTaGTATGCTCCAATCGGAATT +
Preference number: 4 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLTRIFA*YAPIGI
Trigger: AATTCCGATTGGAGCATATCAAGCAAATATTCTGGT...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR TCA 90 bp ACTGAAAGTCTGCTTTTCAAGAGAACTATGATCGTCTATCAATGGAGAGATTTTACCAGAATATTTGCTTaGTATGCTCCAATCGGAATT +
Preference number: 4 (lower is better)
Translates to: TESLLFKRTMIVYQWRDFTRIFA*YAPIGI
Trigger: AATTCCGATTGGAGCATATCAAGCAAATATTCTGGT...AAAATCTCTCCATTGATAGACGATCATAGTTCTCTTGAAAAGCAGACTTTCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR TCA 90 bp TTTTGGCAAACATACTTGTATTATCACCATCCACTTCATGAAGACTATCTGAAGACCAGAATATTTGCTTaGTATGCTCCAATCGGAATT +
Preference number: 4 (lower is better)
Translates to: FWQTYLYYHHPLHEDYLKTRIFA*YAPIGI
Trigger: AATTCCGATTGGAGCATATCAAGCAAATATTCTGGT...CTTCAGATAGTCTTCATGAAGTGGATGGTGATAATACAAGTATGTTTGCCAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR TCA 90 bp GGAGAGATTTTCGTATTTCTATATTCTAATAGTTCACGATCCTTGCTTGATGTCAAGGTCAAGCTTAAATaGTCCTTCTTCCATAAGGAT +
Preference number: 4 (lower is better)
Translates to: GEIFVFLYSNSSRSLLDVKVKLK*SFFHKD
Trigger: ATCCTTATGGAAGAAGGATCATTTAAGCTTGACCTT...GACATCAAGCAAGGATCGTGAACTATTAGAATATAGAAATACGAAAATCTCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR GCA 90 bp AAAAACAACTTCTCTCTTTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCGACTATACCAATAGTTaGATCTTCCACCAGAATATT +
Preference number: 4 (lower is better)
Translates to: KNNFSLFASLSTLSTPVFDYTNS*IFHQNI
Trigger: AATATTCTGGTGGAAGATGCAACTATTGGTATAGTC...GAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR GCA 90 bp TTGCTTGATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCATAGTTCACGATCCTTaGTTGATGTCAGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: LLDVSNSLSTIPIVASSTIVHDP*LMSVIH
Trigger: ATGAATTACTGACATCAAGCAAGGATCGTGAACTAT...GGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATCAAGCAA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR GCA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTATAGTTCACGATCCTTaGTTGATGTCAGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTIVHDP*LMSVIH
Trigger: ATGAATTACTGACATCAAGCAAGGATCGTGAACTAT...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR GCA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTaGTTCTTCACTTTATACCCG +
Preference number: 4 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLYPSLS*FFTLYP
Trigger: CGGGTATAAAGTGAAGAAGCAAGATAATGAGGGATA...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CCA 90 bp TTTTGGCAAACATACTTGTATTATCACCATCCACTTCATGAAGACTATCTGAAGAAGTATTCAAGAACCTaGTTTGAAGAGTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: FWQTYLYYHHPLHEDYLKKYSRT*FEESNR
Trigger: TCTGTTGGACTCTTCAAACCAGGTTCTTGAATACTT...CTTCAGATAGTCTTCATGAAGTGGATGGTGATAATACAAGTATGTTTGCCAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR GCA 90 bp TTGGTATTTACTAACTTAAGTATTCAAGAACCTGGTTTGAAGAGTCCAACAGACAATATTTGCTTGATATaGTCCAATCGGAATTTCAGG +
Preference number: 4 (lower is better)
Translates to: LVFTNLSIQEPGLKSPTDNICLI*SNRNFR
Trigger: CCTGAAATTCCGATTGGAGCATATCAAGCAAATATT...GTCTGTTGGACTCTTCAAACCAGGTTCTTGAATACTTAAGTTAGTAAATACCAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR GCA 90 bp GGAGAGATTTTCGTATTTCTATATTCTAATAGTTCACGATCCTTGCTTGATGTCGACTATACCAATAGTTaGATCTTCCACCAGAATATT +
Preference number: 4 (lower is better)
Translates to: GEIFVFLYSNSSRSLLDVDYTNS*IFHQNI
Trigger: AATATTCTGGTGGAAGATGCAACTATTGGTATAGTC...GACATCAAGCAAGGATCGTGAACTATTAGAATATAGAAATACGAAAATCTCTCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR GCA 90 bp ACTGAAAGTCTGCTTTTCAAGAGAACTATGATCGTCTATCAATGGAGAGATTTTGACTATACCAATAGTTaGATCTTCCACCAGAATATT +
Preference number: 4 (lower is better)
Translates to: TESLLFKRTMIVYQWRDFDYTNS*IFHQNI
Trigger: AATATTCTGGTGGAAGATGCAACTATTGGTATAGTC...AAAATCTCTCCATTGATAGACGATCATAGTTCTCTTGAAAAGCAGACTTTCAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR CAA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAATTGTTGAGACAGGTCTaGCCCTGTCGCCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQLLRQV*PCRPGW
Trigger: CCAGCCTGGGCGACAGGGCAAGACCTGTCTCAACAA...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCGATCATCCCAATTGTTaGGGTGGTCAGCACAGTGTT +
Preference number: 5 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPDHPNC*GGQHSV
Trigger: AACACTGTGCTGACCACCCAAACAATTGGGATGATC...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp GATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCAGAATATTGTTGAGACAGGTCTaGCCCTGTCGCCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: DVSNSLSTIPIVASSTRILLRQV*PCRPGW
Trigger: CCAGCCTGGGCGACAGGGCAAGACCTGTCTCAACAA...TATTCTGGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CAA 90 bp GCAATCCAATGTAGTCATGATCTGCCACTACTGAACCTTGCAAGAGATAAAGACCATGGATTTTCCACCTaGAGAAGGTGCTGTTTCGGT +
Preference number: 5 (lower is better)
Translates to: AIQCSHDLPLLNLARDKDHGFST*RRCCFG
Trigger: ACCGAAACAGCACCTTCTCAAGGTGGAAAATCCATG...GTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCATGACTACATTGGATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CAA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCCATGACTTCTGTTGCTaGTATGAAAAGGCCCCATCA +
Preference number: 5 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPHDFCC*YEKAPS
Trigger: TGATGGGGCCTTTTCATACAAGCAACAGAAGTCATG...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp CTCCAATCGGAATTTCAGGCAATCCAATGTAGTCATGATCTGCCACTACTGAACCTTTTGTTGTTGTTGTaGAGACAGGTCTTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: LQSEFQAIQCSHDLPLLNLLLLL*RQVLPC
Trigger: ACAGGGCAAGACCTGTCTCAACAACAACAACAAAAG...GTTCAGTAGTGGCAGATCATGACTACATTGGATTGCCTGAAATTCCGATTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CAA 90 bp ATCTTCCACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCCATGGATTTTCCACCTaGAGAAGGTGCTGTTTCGGT +
Preference number: 5 (lower is better)
Translates to: IFHQNICLICSNRNFRQSHGFST*RRCCFG
Trigger: ACCGAAACAGCACCTTCTCAAGGTGGAAAATCCATG...GGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR CAA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCTTTAGTTCATCCAAATaGTTGTTCTCCATCTGGCCC +
Preference number: 5 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPFSSSK*LFSIWP
Trigger: GGGCCAGATGGAGAACAACAATTTGGATGAACTAAA...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp CATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGAAGCCCCTTCCACCAGAATATTaGCTTGATATGCTCCAATCG +
Preference number: 5 (lower is better)
Translates to: HYLASSLYTRGSVDNKKPLPPEY*LDMLQS
Trigger: CGATTGGAGCATATCAAGCAAATATTCTGGTGGAAG...GGGCTTCTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTCATGACTTCTGTTGCTaGTATGAAAAGGCCCCATCA +
Preference number: 5 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPHDFCC*YEKAPS
Trigger: TGATGGGGCCTTTTCATACAAGCAACAGAAGTCATG...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTAGTTCATCCAAATTGTaGTTCTCCATCTGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPSSSKL*FSIWPS
Trigger: ACTGGGCCAGATGGAGAACAACAATTTGGATGAACT...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp ATCTTCCACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCAGTTCATCCAAATTGTaGTTCTCCATCTGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: IFHQNICLICSNRNFRQSSSSKL*FSIWPS
Trigger: ACTGGGCCAGATGGAGAACAACAATTTGGATGAACT...GGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CAA 90 bp CATTTCCAAATAAGGTCACATTTTGAGGTGGTGGGGGTTAAGACTTCAACACAACTTTTGTTGTTGTTGTaGAGACAGGTCTTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: HFQIRSHFEVVGVKTSTQLLLLL*RQVLPC
Trigger: ACAGGGCAAGACCTGTCTCAACAACAACAACAAAAG...TTGTGTTGAAGTCTTAACCCCCACCACCTCAAAATGTGACCTTATTTGGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp AGATTTGGGCTGGAATTTATTTCCCAAGAAGTAGGGGTGCTTTGCCTGTTCTCTCACATGGCATTCTCCTaGAGTCTGTGTTCAAATTTT +
Preference number: 5 (lower is better)
Translates to: RFGLEFISQEVGVLCLFSHMAFS*SLCSNF
Trigger: AAAATTTGAACACAGACTCAAGGAGAATGCCATGTG...AGAGAACAGGCAAAGCACCCCTACTTCTTGGGAAATAAATTCCAGCCCAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTCATGGATTTTCCACCTaGAGAAGGTGCTGTTTCGGT +
Preference number: 5 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTHGFST*RRCCFG
Trigger: ACCGAAACAGCACCTTCTCAAGGTGGAAAATCCATG...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp ACTTCTGATGCTGAAACATCACATAGAGGCAAAATCACAATCCATTTGGTGAACCATGACTTCTGTTGCTaGTATGAAAAGGCCCCATCA +
Preference number: 5 (lower is better)
Translates to: TSDAETSHRGKITIHLVNHDFCC*YEKAPS
Trigger: TGATGGGGCCTTTTCATACAAGCAACAGAAGTCATG...GTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGCATCAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512248.5
ENST00000513747.1
CDS-3UTR CAA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTTGGTCAGCACAGTGTTaGGAGAGAAATGCTTTGATT +
Preference number: 5 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPWSAQC*ERNALI
Trigger: AATCAAAGCATTTCTCTCCAAACACTGTGCTGACCA...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp CATGCCTTAACTTGTGCTGTACATGGCTTACATAGTTTATTACCTACCAGACAGTTTAGTTCATCCAAATaGTTGTTCTCCATCTGGCCC +
Preference number: 5 (lower is better)
Translates to: HALTCAVHGLHSLLPTRQFSSSK*LFSIWP
Trigger: GGGCCAGATGGAGAACAACAATTTGGATGAACTAAA...CTGTCTGGTAGGTAATAAACTATGTAAGCCATGTACAGCACAAGTTAAGGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp CATGCCTTAACTTGTGCTGTACATGGCTTACATAGTTTATTACCTACCAGACAGCTTCCACCAGAATATTaGCTTGATATGCTCCAATCG +
Preference number: 5 (lower is better)
Translates to: HALTCAVHGLHSLLPTRQLPPEY*LDMLQS
Trigger: CGATTGGAGCATATCAAGCAAATATTCTGGTGGAAG...CTGTCTGGTAGGTAATAAACTATGTAAGCCATGTACAGCACAAGTTAAGGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp AGATTTGGGCTGGAATTTATTTCCCAAGAAGTAGGGGTGCTTTGCCTGTTCTCTAATAGTTCACGATCCTaGCTTGATGTCAGTAATTCA +
Preference number: 5 (lower is better)
Translates to: RFGLEFISQEVGVLCLFSNSSRS*LDVSNS
Trigger: TGAATTACTGACATCAAGCAAGGATCGTGAACTATT...AGAGAACAGGCAAAGCACCCCTACTTCTTGGGAAATAAATTCCAGCCCAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTAGAAGTAGGGGTGCTTaGCCTGTTCTCTTTTTAGAA +
Preference number: 5 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPRSRGA*PVLFLE
Trigger: TTCTAAAAAGAGAACAGGCAAAGCACCCCTACTTCT...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp GCAATCCAATGTAGTCATGATCTGCCACTACTGAACCTTGCAAGAGATAAAGACAAAGGTTTGAGAGATTaGGGCTGGAATTTATTTCCC +
Preference number: 5 (lower is better)
Translates to: AIQCSHDLPLLNLARDKDKGLRD*GWNLFP
Trigger: GGGAAATAAATTCCAGCCCAAATCTCTCAAACCTTT...GTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCATGACTACATTGGATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CAA 90 bp TTCAGTCTAACCCCAGTGTTGTCTCTCAGGACAGCACATCCACTTTCTGTAATATCTCCCCTAATTCTTTaGTATCCATTTACCAAATCC +
Preference number: 5 (lower is better)
Translates to: FSLTPVLSLRTAHPLSVISPLIL*YPFTKS
Trigger: GGATTTGGTAAATGGATACAAAAGAATTAGGGGAGA...TATTACAGAAAGTGGATGTGCTGTCCTGAGAGACAACACTGGGGTTAGACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CAA 90 bp AATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCAATGTAGTCATGCATGACTTCTGTTGCTaGTATGAAAAGGCCCCATCA +
Preference number: 5 (lower is better)
Translates to: NICLICSNRNFRQSNVVMHDFCC*YEKAPS
Trigger: TGATGGGGCCTTTTCATACAAGCAACAGAAGTCATG...CATGACTACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR CAA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTGATCATCCCAATTGTTaGGGTGGTCAGCACAGTGTT +
Preference number: 5 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLDHPNC*GGQHSV
Trigger: AACACTGTGCTGACCACCCAAACAATTGGGATGATC...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp ATCCCTCATTATCTTGCTTCTTCACTTTATACCCGAGGCAGTGTAGACAACAAGGTTCACGATCCTTGCTaGATGTCAGTAATTCATTAT +
Preference number: 5 (lower is better)
Translates to: IPHYLASSLYTRGSVDNKVHDPC*MSVIHY
Trigger: ATAATGAATTACTGACATCAAGCAAGGATCGTGAAC...CTTGTTGTCTACACTGCCTCGGGTATAAAGTGAAGAAGCAAGATAATGAGGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp TTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGCAATTTAGCATGCCTAAAGGTTTGAGAGATTaGGGCTGGAATTTATTTCCC +
Preference number: 5 (lower is better)
Translates to: FCLPKYIIYTCLLQFSMPKGLRD*GWNLFP
Trigger: GGGAAATAAATTCCAGCCCAAATCTCTCAAACCTTT...AGGCATGCTAAATTGCAGAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp CATGCCTTAACTTGTGCTGTACATGGCTTACATAGTTTATTACCTACCAGACAGACTTCAACACAAATTTaGGGAGGGGCACATATCAAT +
Preference number: 5 (lower is better)
Translates to: HALTCAVHGLHSLLPTRQTSTQI*GGAHIN
Trigger: ATTGATATGTGCCCCTCCCAAAATTTGTGTTGAAGT...CTGTCTGGTAGGTAATAAACTATGTAAGCCATGTACAGCACAAGTTAAGGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp CATGCCTTAACTTGTGCTGTACATGGCTTACATAGTTTATTACCTACCAGACAGCACATGGCATTCTCCTaGAGTCTGTGTTCAAATTTT +
Preference number: 5 (lower is better)
Translates to: HALTCAVHGLHSLLPTRQHMAFS*SLCSNF
Trigger: AAAATTTGAACACAGACTCAAGGAGAATGCCATGTG...CTGTCTGGTAGGTAATAAACTATGTAAGCCATGTACAGCACAAGTTAAGGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS TCA 90 bp CATTGTTACCAAACTTTGTGCCAAGTTGCCCCCTTAACATCTGTTTaGCACCATGAAAACTACCAGTTTAAGGTAGTTCAGTTTCAACAT +
Preference number: 5 (lower is better)
Translates to: HCYQTLCQVAPLTSV*HHENYQFKVVQFQH
Trigger: ATGTTGAAACTGAACTACCTTAAACTGGTAGTTTTCATGGTGTCAAACAGATGTTAAGGGGGCAACTTGGCACAAAGTTTGGTAACAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511400.1
CDS-3UTR CAA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTGCATATACCCACTGTTaGACATCATTGGTCACAGAT +
Preference number: 5 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTAYTHC*TSLVTD
Trigger: ATCTGTGACCAATGATGTCAAACAGTGGGTATATGC...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399004.7
CDS-3UTR CAA 90 bp AAAAACAACTTCTCTCTTTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTGGTCAGCACAGTGTTaGGAGAGAAATGCTTTGATT +
Preference number: 5 (lower is better)
Translates to: KNNFSLFASLSTLSTPVFWSAQC*ERNALI
Trigger: AATCAAAGCATTTCTCTCCAAACACTGTGCTGACCA...GAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp CACCAGAATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCAATGTACACCAGAATATTTGCTaGATATGCTCCAATCGGAAT +
Preference number: 5 (lower is better)
Translates to: HQNICLICSNRNFRQSNVHQNIC*ICSNRN
Trigger: ATTCCGATTGGAGCATATCAAGCAAATATTCTGGTG...TACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR CAA 90 bp TTGCTTGATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCCTTCCACCAGAATATTaGCTTGATATGCTCCAATCG +
Preference number: 5 (lower is better)
Translates to: LLDVSNSLSTIPIVASSTLPPEY*LDMLQS
Trigger: CGATTGGAGCATATCAAGCAAATATTCTGGTGGAAG...GGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATCAAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR CAA 90 bp AAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCACTAGAAGTAGGGGTGCTTaGCCTGTTCTCTTTTTAGAA +
Preference number: 5 (lower is better)
Translates to: KVSYLPFQLYPSLSCFFTRSRGA*PVLFLE
Trigger: TTCTAAAAAGAGAACAGGCAAAGCACCCCTACTTCT...AGTGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAAAAACCATACAAAGGTTaGAGAGATTTGGGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKKPYKG*RDLGWN
Trigger: ATTCCAGCCCAAATCTCTCAAACCTTTGTATGGTTT...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp CATGCCTTAACTTGTGCTGTACATGGCTTACATAGTTTATTACCTACCAGACAGTTATCCCTCATTATCTaGCTTCTTCACTTTATACCC +
Preference number: 5 (lower is better)
Translates to: HALTCAVHGLHSLLPTRQLSLII*LLHFIP
Trigger: GGGTATAAAGTGAAGAAGCAAGATAATGAGGGATAA...CTGTCTGGTAGGTAATAAACTATGTAAGCCATGTACAGCACAAGTTAAGGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS TCA 90 bp TTTTGCTGCTCTTCTTATGCCACTTCTCTCACTTGGCAGTGTAGTTaGATGATATTCACCAGTTCGTTTGTAATATGCAATCTGTTTAAG +
Preference number: 5 (lower is better)
Translates to: FCCSSYATSLTWQCS*MIFTSSFVICNLFK
Trigger: CTTAAACAGATTGCATATTACAAACGAACTGGTGAATATCATTCAACTACACTGCCAAGTGAGAGAAGTGGCATAAGAAGAGCAGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399004.7
ENST00000508629.5
ENST00000512248.5
ENST00000513603.1
ENST00000513747.1
CDS-3UTR CAA 90 bp GGAGAGATTTTCGTATTTCTATATTCTAATAGTTCACGATCCTTGCTTGATGTCGCATATACCCACTGTTaGACATCATTGGTCACAGAT +
Preference number: 5 (lower is better)
Translates to: GEIFVFLYSNSSRSLLDVAYTHC*TSLVTD
Trigger: ATCTGTGACCAATGATGTCAAACAGTGGGTATATGC...GACATCAAGCAAGGATCGTGAACTATTAGAATATAGAAATACGAAAATCTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508629.5
CDS-3UTR CAA 90 bp GATGCTGAAACATCACATAGAGGCAAAATCACAATCCATTTGGTGAACAAATCTTCTGGCCCAGTGAAGTaGTCTTATTCTCCATTATTT +
Preference number: 5 (lower is better)
Translates to: DAETSHRGKITIHLVNKSSGPVK*SYSPLF
Trigger: AAATAATGGAGAATAAGACAACTTCACTGGGCCAGA...AGATTTGTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CAA 90 bp GCTGAAACATCACATAGAGGCAAAATCACAATCCATTTGGTGAACAAATCTGTCTTAAGGTGGGACATTTaGATAGGTCTTTTCAGTCTA +
Preference number: 5 (lower is better)
Translates to: AETSHRGKITIHLVNKSVLRWDI*IGLFSL
Trigger: TAGACTGAAAAGACCTATCAAAATGTCCCACCTTAA...GACAGATTTGTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CAA 90 bp GATGCTGAAACATCACATAGAGGCAAAATCACAATCCATTTGGTGAACAAATCTAAACCATACAAAGGTTaGAGAGATTTGGGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: DAETSHRGKITIHLVNKSKPYKG*RDLGWN
Trigger: ATTCCAGCCCAAATCTCTCAAACCTTTGTATGGTTT...AGATTTGTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CAA 90 bp TTCCCCTTTTATCAGAACACCAGTAATACTGTATTAGAGCCCACCCTATTGAAATCTCCCCTAATTCTTTaGTATCCATTTACCAAATCC +
Preference number: 5 (lower is better)
Translates to: FPFYQNTSNTVLEPTLLKSPLIL*YPFTKS
Trigger: GGATTTGGTAAATGGATACAAAAGAATTAGGGGAGA...TTTCAATAGGGTGGGCTCTAATACAGTATTACTGGTGTTCTGATAAAAGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp TCCTTAATAGTATTCAAAGCTCTCCATAAGGTTTCCTACTTACCTTTTCAGCTTTCTGGCCCAGTGAAGTaGTCTTATTCTCCATTATTT +
Preference number: 5 (lower is better)
Translates to: SLIVFKALHKVSYLPFQLSGPVK*SYSPLF
Trigger: AAATAATGGAGAATAAGACAACTTCACTGGGCCAGA...AAGCTGAAAAGGTAAGTAGGAAACCTTATGGAGAGCTTTGAATACTATTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp AAAAACAACTTCTCTCTTTTTGCCTCCCTAAGTACATTATCTACACCTGTCTTCTTAAGGTGGGACATTTaGATAGGTCTTTTCAGTCTA +
Preference number: 5 (lower is better)
Translates to: KNNFSLFASLSTLSTPVFLRWDI*IGLFSL
Trigger: TAGACTGAAAAGACCTATCAAAATGTCCCACCTTAA...GAAGACAGGTGTAGATAATGTACTTAGGGAGGCAAAAAGAGAGAAGTTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp GGAGAGATTTTCGTATTTCTATATTCTAATAGTTCACGATCCTTGCTTGATGTCCACCAGAATATTTGCTaGATATGCTCCAATCGGAAT +
Preference number: 5 (lower is better)
Translates to: GEIFVFLYSNSSRSLLDVHQNIC*ICSNRN
Trigger: ATTCCGATTGGAGCATATCAAGCAAATATTCTGGTG...GACATCAAGCAAGGATCGTGAACTATTAGAATATAGAAATACGAAAATCTCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR CAA 90 bp TTGCTTGATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCGTTCACGATCCTTGCTaGATGTCAGTAATTCATTAT +
Preference number: 5 (lower is better)
Translates to: LLDVSNSLSTIPIVASSTVHDPC*MSVIHY
Trigger: ATAATGAATTACTGACATCAAGCAAGGATCGTGAAC...GGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATCAAGCAA
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR CAA 90 bp TTGCTTGATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCAATAGTTCACGATCCTaGCTTGATGTCAGTAATTCA +
Preference number: 5 (lower is better)
Translates to: LLDVSNSLSTIPIVASSTNSSRS*LDVSNS
Trigger: TGAATTACTGACATCAAGCAAGGATCGTGAACTATT...GGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATCAAGCAA
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS-3UTR CAA 90 bp TTGCTTGATGTCAGTAATTCATTATCGACTATACCAATAGTTGCATCTTCCACCTTATCCCTCATTATCTaGCTTCTTCACTTTATACCC +
Preference number: 5 (lower is better)
Translates to: LLDVSNSLSTIPIVASSTLSLII*LLHFIP
Trigger: GGGTATAAAGTGAAGAAGCAAGATAATGAGGGATAA...GGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATCAAGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CAA 90 bp ATAAGGTTTCCTACTTACCTTTTCAGCTTTATCCCTCATTATCTTGCTTCTTCAACTTCAACACAAATTTaGGGAGGGGCACATATCAAT +
Preference number: 5 (lower is better)
Translates to: IRFPTYLFSFIPHYLASSTSTQI*GGAHIN
Trigger: ATTGATATGTGCCCCTCCCAAAATTTGTGTTGAAGT...TGAAGAAGCAAGATAATGAGGGATAAAGCTGAAAAGGTAAGTAGGAAACCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399004.7
ENST00000512248.5
CDS-3UTR CAA 90 bp AATATTTGCTTGATATGCTCCAATCGGAATTTCAGGCAATCCAATGTAGTCATGAACAATAGAATTTTATaGTCTCACAGTTCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: NICLICSNRNFRQSNVVMNNRIL*SHSSGG
Trigger: GCCTCCAGAACTGTGAGACAATAAAATTCTATTGTT...CATGACTACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512248.5
CDS-3UTR CAA 90 bp TTGGTATTTACTAACTTAAGTATTCAAGAACCTGGTTTGAAGAGTCCAACAGACAATAGTTCACGATCCTaGCTTGATGTCAGTAATTCA +
Preference number: 5 (lower is better)
Translates to: LVFTNLSIQEPGLKSPTDNSSRS*LDVSNS
Trigger: TGAATTACTGACATCAAGCAAGGATCGTGAACTATT...GTCTGTTGGACTCTTCAAACCAGGTTCTTGAATACTTAAGTTAGTAAATACCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508629.5
ENST00000512248.5
CDS TCA 72 bp CAAACTTTGTGCCAAGTTGCCCCCTTAACATCTGTTTaGCACCATGAAAACTACCAGTTTAAGGTAGTTCAG +
Preference number: 6 (lower is better)
Translates to: QTLCQVAPLTSV*HHENYQFKVVQ
Trigger: CTGAACTACCTTAAACTGGTAGTTTTCATGGTGTCAAACAGATGTTAAGGGGGCAACTTGGCACAAAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511400.1
CDS CAA 72 bp AGATCAACAGTAACTAAACTCCATGGATTTTCCACCTaGAGAAGGTGCTGTTTCGGTGCTACAATAACTGTA +
Preference number: 6 (lower is better)
Translates to: RSTVTKLHGFST*RRCCFGATITV
Trigger: TACAGTTATTGTAGCACCGAAACAGCACCTTCTCAAGGTGGAAAATCCATGGAGTTTAGTTACTGTTGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399004.7
ENST00000508629.5
ENST00000512248.5
ENST00000513747.1
CDS CAA 90 bp CCTCTACTAGACACATTTGTGACACTAGCTTTATCATTTAAACCATaGTTACCAAACTTTGTGCCAAGTTGCCCCCTTAACATCTGTTTG +
Preference number: 6 (lower is better)
Translates to: PLLDTFVTLALSFKP*LPNFVPSCPLNICL
Trigger: CAAACAGATGTTAAGGGGGCAACTTGGCACAAAGTTTGGTAACAATGGTTTAAATGATAAAGCTAGTGTCACAAATGTGTCTAGTAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511400.1
CDS TCA 72 bp TCTTCTTATGCCACTTCTCTCACTTGGCAGTGTAGTTaGATGATATTCACCAGTTCGTTTGTAATATGCAAT +
Preference number: 6 (lower is better)
Translates to: SSYATSLTWQCS*MIFTSSFVICN
Trigger: ATTGCATATTACAAACGAACTGGTGAATATCATTCAACTACACTGCCAAGTGAGAGAAGTGGCATAAGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399004.7
ENST00000508629.5
ENST00000512248.5
ENST00000513603.1
ENST00000513747.1