Pregenerated sensors for GIMD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000250298Ensembl transcript IDs: ENST00000507153.2, ENST00000638719.4
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTATACCAATGTACACTCTCACCAGCAGCATATCAGAATACTTATaGTCCACATTCATGTCAATAAAGGCATTCTTTGTAGCTAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: VIPMYTLTSSISEYL*STFMSIKAFFVARF Trigger: AAACCTAGCTACAAAGAATGCCTTTATTGACATGAATGTGGACCATAAGTATTCTGATATGCTGCTGGTGAGAGTGTACATTGGTATAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| 3UTR CCA 90 bp | GAACTTTCTGCACATGGAATCATGGAGTATGTACTCTTTTATGTCTaGCTTATTTTTCAACATTATGTTTGGGCAATTCACTGGTATCGT | + |
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Preference number: 1 (lower is better) Translates to: ELSAHGIMEYVLFYV*LIFQHYVWAIHWYR Trigger: ACGATACCAGTGAATTGCCCAAACATAATGTTGAAAAATAAGCCAGACATAAAAGAGTACATACTCCATGATTCCATGTGCAGAAAGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAATTTCTAGTTTTCCAAAGTaGTTATACCAATGTACACTC | + |
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Preference number: 2 (lower is better) Translates to: KCNLSLTISSPRLTTLPISSFPK*LYQCTL Trigger: GAGTGTACATTGGTATAACCACTTTGGAAAACTAGA...AATTGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAATTTTTCAACATTATGTTTaGGCAATTCACTGGTATCGT | + |
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Preference number: 2 (lower is better) Translates to: KCNLSLTISSPRLTTLPIFQHYV*AIHWYR Trigger: ACGATACCAGTGAATTGCCCAAACATAATGTTGAAA...AATTGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| 3UTR-3UTR CAA 90 bp | ATCAAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAATGTACACATTTATGTaGGGTATACACTTAGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: IKCNLSLTISSPRLTTLPMYTFM*GIHLGV Trigger: CACTCCTAAGTGTATACCCAACATAAATGTGTACAT...TGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| 3UTR-3UTR CAA 90 bp | AAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAATTTTTTCAACATTATGTTaGGGCAATTCACTGGTATCG | + |
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Preference number: 3 (lower is better) Translates to: KCNLSLTISSPRLTTLPIFSTLC*GNSLVS Trigger: CGATACCAGTGAATTGCCCAAACATAATGTTGAAAA...AATTGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| 3UTR CCA 72 bp | ATGTACACTCTCACCAGCAGCATATCAGAATACTTATaGTCCACATTCATGTCAATAAAGGCATTCTTTGTA | + |
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Preference number: 3 (lower is better) Translates to: MYTLTSSISEYL*STFMSIKAFFV Trigger: TACAAAGAATGCCTTTATTGACATGAATGTGGACCATAAGTATTCTGATATGCTGCTGGTGAGAGTGTACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR TCA 90 bp | AAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAATTGCCCACCTCGACGCATaGAGCTGTGGAGGTGACAAC | + |
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Preference number: 4 (lower is better) Translates to: KCNLSLTISSPRLTTLPIAHLDA*SCGGDN Trigger: GTTGTCACCTCCACAGCTTCATGCGTCGAGGTGGGC...AATTGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR GCA 90 bp | ATCAAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCATCCAACACCTGGACCTaGAGGGCTACCTCTAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: IKCNLSLTISSPRLTTLPSNTWT*RATSSP Trigger: TGGGCTAGAGGTAGCCCTGCAGGTCCAGGTGTTGGA...TGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CCA 90 bp | AAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAATTACCAGGAGTGCAAGGTaGAGACCCCCTTGCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: KCNLSLTISSPRLTTLPITRSAR*RPPCPK Trigger: CTTCGGGCAAGGGGGTCTCCACCTTGCACTCCTGGT...AATTGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CCA 90 bp | AAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAATTGGAGTGTCCAACACCTaGACCTGCAGGGCTACCTCT | + |
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Preference number: 4 (lower is better) Translates to: KCNLSLTISSPRLTTLPIGVSNT*TCRATS Trigger: AGAGGTAGCCCTGCAGGTCCAGGTGTTGGACACTCC...AATTGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR GCA 90 bp | AAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAATTTCTCTGAACCAGGAGTaGAAGGTGGAGACCCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KCNLSLTISSPRLTTLPISLNQE*KVETPL Trigger: CAAGGGGGTCTCCACCTTGCACTCCTGGTTCAGAGA...AATTGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CCA 90 bp | ATCAAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCACTGGATCATCTGGACTaGGTCAGTTACTTCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: IKCNLSLTISSPRLTTLPLDHLD*VSYFLP Trigger: GGGCAGGAAGTAACTGACCCAGTCCAGATGATCCAG...TGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR TCA 90 bp | ATCAAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAGAACTTTTTCCACTCTaGGTCATGCCAAAGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: IKCNLSLTISSPRLTTLPELFPL*VMPKRA Trigger: GGCCCTCTTTGGCATGACTCAGAGTGGAAAAAGTTC...TGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR TCA 90 bp | ATGTCAATAAAGGCATTCTTTGTAGCTAGGTTTCTGACTCCAATACCCAATGCTCCCCCTTGCCCGAAGTaGTGTGCCAGAGCCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: MSIKAFFVARFLTPIPNAPPCPK*CARASL Trigger: CAAAGAGGCTCTGGCACATCACTTCGGGCAAGGGGG...AGCATTGGGTATTGGAGTCAGAAACCTAGCTACAAAGAATGCCTTTATTGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR GCA 90 bp | ATCAAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCATTGCCCGAAGTGATGTaGCAGAGCCTCTTTGACTTC | + |
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Preference number: 4 (lower is better) Translates to: IKCNLSLTISSPRLTTLPLPEVM*QSLFDF Trigger: GAAGTCAAAGAGGCTCTGGCACATCACTTCGGGCAA...TGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR TCA 90 bp | TGTTTGTTGTTGCATTTTCACAAAGTGAACAAATCCTGTGAAACCAGGCTCCAAGGCACATCTGCTCTCTaGACCAGGAGTGCAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CLLLHFHKVNKSCETRLQGTSAL*TRSARW Trigger: CCACCTTGCACTCCTGGTTCAGAGAGCAGATGTGCC...TTGGAGCCTGGTTTCACAGGATTTGTTCACTTTGTGAAAATGCAACAACAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CCA 90 bp | ATCAAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAAGACGTCTCTCGCCCTaGCACAGTTGTTCTTTCATA | + |
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Preference number: 4 (lower is better) Translates to: IKCNLSLTISSPRLTTLPRRLSP*HSCSFI Trigger: TATGAAAGAACAACTGTGCCAGGGCGAGAGACGTCT...TGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR TCA 90 bp | TGTTTGTTGTTGCATTTTCACAAAGTGAACAAATCCTGTGAAACCAGGCTCCAAGGAGCAAAGCTGCTGTaGAAGTCTGTGCTTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CLLLHFHKVNKSCETRLQGAKLL*KSVLPS Trigger: GCTGGGAAGCACAGACTTTCACAGCAGCTTTGCTCC...TTGGAGCCTGGTTTCACAGGATTTGTTCACTTTGTGAAAATGCAACAACAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR GCA 90 bp | AAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAATTAACAGGGAGCAAAGCTaGTGTGAAAGTCTGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KCNLSLTISSPRLTTLPINREQS*CESLCF Trigger: GAAGCACAGACTTTCACAGCAGCTTTGCTCCCTGTT...AATTGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR GCA 90 bp | TGTTTGTTGTTGCATTTTCACAAAGTGAACAAATCCTGTGAAACCAGGCTCCAATGTGGAGGTGACAACTaGGGCCCAGGCTACAACATG | + |
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Preference number: 4 (lower is better) Translates to: CLLLHFHKVNKSCETRLQCGGDN*GPGYNM Trigger: CATGTTGTAGCCTGGGCCGCAGTTGTCACCTCCACA...TTGGAGCCTGGTTTCACAGGATTTGTTCACTTTGTGAAAATGCAACAACAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CCA 90 bp | TGTTTGTTGTTGCATTTTCACAAAGTGAACAAATCCTGTGAAACCAGGCTCCAAGCTGTGTGGATAACCTaGAGTGTCCAACACCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: CLLLHFHKVNKSCETRLQAVWIT*SVQHLD Trigger: GTCCAGGTGTTGGACACTCCAGGTTATCCACACAGC...TTGGAGCCTGGTTTCACAGGATTTGTTCACTTTGTGAAAATGCAACAACAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CCA 90 bp | ATGTCAATAAAGGCATTCTTTGTAGCTAGGTTTCTGACTCCAATACCCAATGCTGCTCAGCCTGCTGTGTaGATAACCTGGAGTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: MSIKAFFVARFLTPIPNAAQPAV*ITWSVQ Trigger: TTGGACACTCCAGGTTATCCACACAGCAGGCTGAGC...AGCATTGGGTATTGGAGTCAGAAACCTAGCTACAAAGAATGCCTTTATTGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR GCA 90 bp | ATGTCAATAAAGGCATTCTTTGTAGCTAGGTTTCTGACTCCAATACCCAATGCTACTTCTTGCTCAGCCTaGTGTGTGGATAACCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: MSIKAFFVARFLTPIPNATSCSA*CVDNLE Trigger: CTCCAGGTTATCCACACAGCAGGCTGAGCAAGAAGT...AGCATTGGGTATTGGAGTCAGAAACCTAGCTACAAAGAATGCCTTTATTGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR GCA 90 bp | ATGTCAATAAAGGCATTCTTTGTAGCTAGGTTTCTGACTCCAATACCCAATGCTACAGAAAGGCACATCTaGTCTCTGAACCAGGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: MSIKAFFVARFLTPIPNATERHI*SLNQEC Trigger: GCACTCCTGGTTCAGAGAGCAGATGTGCCTTTCTGT...AGCATTGGGTATTGGAGTCAGAAACCTAGCTACAAAGAATGCCTTTATTGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR GCA 90 bp | TGTTTGTTGTTGCATTTTCACAAAGTGAACAAATCCTGTGAAACCAGGCTCCAAGGGTCAGTTACTTCCTaGCCACAGAAAGGCACATCT | + |
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Preference number: 4 (lower is better) Translates to: CLLLHFHKVNKSCETRLQGSVTS*PQKGTS Trigger: AGATGTGCCTTTCTGTGGGCAGGAAGTAACTGACCC...TTGGAGCCTGGTTTCACAGGATTTGTTCACTTTGTGAAAATGCAACAACAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CCA 90 bp | ATGTCAATAAAGGCATTCTTTGTAGCTAGGTTTCTGACTCCAATACCCAATGCTCCAGGCTACAACATGTaGTCACAGAACAGGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: MSIKAFFVARFLTPIPNAPGYNM*SQNREQ Trigger: TTGCTCCCTGTTCTGTGACCACATGTTGTAGCCTGG...AGCATTGGGTATTGGAGTCAGAAACCTAGCTACAAAGAATGCCTTTATTGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR TCA 90 bp | ATGTCAATAAAGGCATTCTTTGTAGCTAGGTTTCTGACTCCAATACCCAATGCTGTGCCAGAGCCTCTTTaGCTTCCTGTTTCACATACT | + |
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Preference number: 4 (lower is better) Translates to: MSIKAFFVARFLTPIPNAVPEPL*LPVSHT Trigger: AGTATGTGAAACAGGAAGTCAAAGAGGCTCTGGCAC...AGCATTGGGTATTGGAGTCAGAAACCTAGCTACAAAGAATGCCTTTATTGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR TCA 90 bp | ATCAAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCATGCATTTTCACAAAGTaGACAAATCCTGTGAAACCA | + |
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Preference number: 4 (lower is better) Translates to: IKCNLSLTISSPRLTTLPCIFTK*TNPVKP Trigger: TGGTTTCACAGGATTTGTTCACTTTGTGAAAATGCA...TGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CCA 90 bp | ATGTCAATAAAGGCATTCTTTGTAGCTAGGTTTCTGACTCCAATACCCAATGCTAGTTCCTGGATCATCTaGACTGGGTCAGTTACTTCC | + |
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Preference number: 4 (lower is better) Translates to: MSIKAFFVARFLTPIPNASSWII*TGSVTS Trigger: GGAAGTAACTGACCCAGTCCAGATGATCCAGGAACT...AGCATTGGGTATTGGAGTCAGAAACCTAGCTACAAAGAATGCCTTTATTGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CCA 90 bp | TGTTTGTTGTTGCATTTTCACAAAGTGAACAAATCCTGTGAAACCAGGCTCCAATGTCCAAGAAGTTCCTaGATCATCTGGACTGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: CLLLHFHKVNKSCETRLQCPRSS*IIWTGS Trigger: TGACCCAGTCCAGATGATCCAGGAACTTCTTGGACA...TTGGAGCCTGGTTTCACAGGATTTGTTCACTTTGTGAAAATGCAACAACAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR GCA 90 bp | ATGTCAATAAAGGCATTCTTTGTAGCTAGGTTTCTGACTCCAATACCCAATGCTGTTTCACATACTTCTTaGTCAGCCTGCTGTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: MSIKAFFVARFLTPIPNAVSHTS*SACCVD Trigger: ATCCACACAGCAGGCTGAGCAAGAAGTATGTGAAAC...AGCATTGGGTATTGGAGTCAGAAACCTAGCTACAAAGAATGCCTTTATTGACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR TCA 90 bp | ATGTCAATAAAGGCATTCTTTGTAGCTAGGTTTCTGACTCCAATACCCAATGCTGAGAACAAAAGAACATaGCCAGAATCTCAGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: MSIKAFFVARFLTPIPNAENKRT*PESQKP Trigger: TGGCTTCTGAGATTCTGGTCATGTTCTTTTGTTCTC...AGCATTGGGTATTGGAGTCAGAAACCTAGCTACAAAGAATGCCTTTATTGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CCA 90 bp | ATGTCAATAAAGGCATTCTTTGTAGCTAGGTTTCTGACTCCAATACCCAATGCTTCTAGTTTTCCAAAGTaGTTATACCAATGTACACTC | + |
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Preference number: 4 (lower is better) Translates to: MSIKAFFVARFLTPIPNASSFPK*LYQCTL Trigger: GAGTGTACATTGGTATAACCACTTTGGAAAACTAGA...AGCATTGGGTATTGGAGTCAGAAACCTAGCTACAAAGAATGCCTTTATTGACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CCA 90 bp | TGTTTGTTGTTGCATTTTCACAAAGTGAACAAATCCTGTGAAACCAGGCTCCAATTTCAACATTATGTTTaGGCAATTCACTGGTATCGT | + |
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Preference number: 4 (lower is better) Translates to: CLLLHFHKVNKSCETRLQFQHYV*AIHWYR Trigger: ACGATACCAGTGAATTGCCCAAACATAATGTTGAAA...TTGGAGCCTGGTTTCACAGGATTTGTTCACTTTGTGAAAATGCAACAACAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS TCA 90 bp | CCAACACCTGGACCTGCAGGGCTACCTCTAGCCCACCTCGACGCATaGAGCTGTGGAGGTGACAACTGCGGCCCAGGCTACAACATGTGG | + |
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Preference number: 5 (lower is better) Translates to: PTPGPAGLPLAHLDA*SCGGDNCGPGYNMW Trigger: CCACATGTTGTAGCCTGGGCCGCAGTTGTCACCTCCACAGCTTCATGCGTCGAGGTGGGCTAGAGGTAGCCCTGCAGGTCCAGGTGTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS GCA 90 bp | TACTTCCTGCCCACAGAAAGGCACATCTGCTCTCTGAACCAGGAGTaGAAGGTGGAGACCCCCTTGCCCGAAGTGATGTGCCAGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: YFLPTERHICSLNQE*KVETPLPEVMCQSL Trigger: GAGGCTCTGGCACATCACTTCGGGCAAGGGGGTCTCCACCTTGCACTCCTGGTTCAGAGAGCAGATGTGCCTTTCTGTGGGCAGGAAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS TCA 90 bp | CAAGGTGGAGACCCCCTTGCCCGAAGTGATGTGCCAGAGCCTCTTTaGCTTCCTGTTTCACATACTTCTTGCTCAGCCTGCTGTGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: QGGDPLARSDVPEPL*LPVSHTSCSACCVD Trigger: ATCCACACAGCAGGCTGAGCAAGAAGTATGTGAAACAGGAAGTCAAAGAGGCTCTGGCACATCACTTCGGGCAAGGGGGTCTCCACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS GCA 90 bp | TGCGGCCCAGGCTACAACATGTGGTCACAGAACAGGGAGCAAAGCTaGTGTGAAAGTCTGTGCTTCCCAGCAGAATGTTTCCAGCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: CGPGYNMWSQNREQS*CESLCFPAECFQQN Trigger: GTTCTGCTGGAAACATTCTGCTGGGAAGCACAGACTTTCACAGCAGCTTTGCTCCCTGTTCTGTGACCACATGTTGTAGCCTGGGCCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS GCA 90 bp | CTGAACCAGGAGTGCAAGGTGGAGACCCCCTTGCCCGAAGTGATGTaGCAGAGCCTCTTTGACTTCCTGTTTCACATACTTCTTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LNQECKVETPLPEVM*QSLFDFLFHILLAQ Trigger: CTGAGCAAGAAGTATGTGAAACAGGAAGTCAAAGAGGCTCTGGCACATCACTTCGGGCAAGGGGGTCTCCACCTTGCACTCCTGGTTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS CCA 90 bp | CTCTTTGACTTCCTGTTTCACATACTTCTTGCTCAGCCTGCTGTGTaGATAACCTGGAGTGTCCAACACCTGGACCTGCAGGGCTACCTC | + |
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Preference number: 5 (lower is better) Translates to: LFDFLFHILLAQPAV*ITWSVQHLDLQGYL Trigger: GAGGTAGCCCTGCAGGTCCAGGTGTTGGACACTCCAGGTTATCCACACAGCAGGCTGAGCAAGAAGTATGTGAAACAGGAAGTCAAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS-3UTR CAA 90 bp | AAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAATTAAGGTGGAGACCCCCTaGCCCGAAGTGATGTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: KCNLSLTISSPRLTTLPIKVETP*PEVMCQ Trigger: CTGGCACATCACTTCGGGCAAGGGGGTCTCCACCTT...AATTGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS TCA 90 bp | TCTGTGCTTCCCAGCAGAATGTTTCCAGCAGAACTTTTTCCACTCTaGGTCATGCCAAAGAGGGCCAAGTTGATGATCATCTTGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: SVLPSRMFPAELFPL*VMPKRAKLMIILLG Trigger: CCCCAACAAGATGATCATCAACTTGGCCCTCTTTGGCATGACTCAGAGTGGAAAAAGTTCTGCTGGAAACATTCTGCTGGGAAGCACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS GCA 90 bp | AACATGTGGTCACAGAACAGGGAGCAAAGCTGCTGTGAAAGTCTGTaGTTCCCAGCAGAATGTTTCCAGCAGAACTTTTTCCACTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: NMWSQNREQSCCESL*FPAECFQQNFFHSE Trigger: CTCAGAGTGGAAAAAGTTCTGCTGGAAACATTCTGCTGGGAAGCACAGACTTTCACAGCAGCTTTGCTCCCTGTTCTGTGACCACATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS-3UTR CAA 90 bp | AAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAATTTGTTTCACATACTTCTaGCTCAGCCTGCTGTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: KCNLSLTISSPRLTTLPICFTYF*LSLLCG Trigger: TCCACACAGCAGGCTGAGCAAGAAGTATGTGAAACA...AATTGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CAA 90 bp | ATCAAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAAAGTTGATGATCATCTaGTTGGGGTCTGTCATGGCT | + |
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Preference number: 5 (lower is better) Translates to: IKCNLSLTISSPRLTTLPKLMII*LGSVMA Trigger: AGCCATGACAGACCCCAACAAGATGATCATCAACTT...TGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CAA 90 bp | ATGTCAATAAAGGCATTCTTTGTAGCTAGGTTTCTGACTCCAATACCCAATGCTCCAAAGAGGGCCAAGTaGATGATCATCTTGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: MSIKAFFVARFLTPIPNAPKRAK*MIILLG Trigger: CCCCAACAAGATGATCATCAACTTGGCCCTCTTTGG...AGCATTGGGTATTGGAGTCAGAAACCTAGCTACAAAGAATGCCTTTATTGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CAA 90 bp | TGTTTGTTGTTGCATTTTCACAAAGTGAACAAATCCTGTGAAACCAGGCTCCAATGTGCCAGAGCCTCTTaGACTTCCTGTTTCACATAC | + |
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Preference number: 5 (lower is better) Translates to: CLLLHFHKVNKSCETRLQCARAS*TSCFTY Trigger: GTATGTGAAACAGGAAGTCAAAGAGGCTCTGGCACA...TTGGAGCCTGGTTTCACAGGATTTGTTCACTTTGTGAAAATGCAACAACAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CAA 90 bp | AAGTGTAACCTTTCACTCACAATCTCCTCCCCAAGGTTAACCACTCTCCCAATTATGTACACATTTATGTaGGGTATACACTTAGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: KCNLSLTISSPRLTTLPIMYTFM*GIHLGV Trigger: CACTCCTAAGTGTATACCCAACATAAATGTGTACAT...AATTGGGAGAGTGGTTAACCTTGGGGAGGAGATTGTGAGTGAAAGGTTACACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS-3UTR CAA 90 bp | ATGTCAATAAAGGCATTCTTTGTAGCTAGGTTTCTGACTCCAATACCCAATGCTTTGATGATCATCTTGTaGGGGTCTGTCATGGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: MSIKAFFVARFLTPIPNALMIIL*GSVMAF Trigger: AAAAGCCATGACAGACCCCAACAAGATGATCATCAA...AGCATTGGGTATTGGAGTCAGAAACCTAGCTACAAAGAATGCCTTTATTGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638719.4 |
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| CDS TCA 72 bp | GGACCTGCAGGGCTACCTCTAGCCCACCTCGACGCATaGAGCTGTGGAGGTGACAACTGCGGCCCAGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: GPAGLPLAHLDA*SCGGDNCGPGY Trigger: GTAGCCTGGGCCGCAGTTGTCACCTCCACAGCTTCATGCGTCGAGGTGGGCTAGAGGTAGCCCTGCAGGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS TCA 72 bp | GTTACTTCCTGCCCACAGAAAGGCACATCTGCTCTCTaGACCAGGAGTGCAAGGTGGAGACCCCCTTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: VTSCPQKGTSAL*TRSARWRPPCP Trigger: CGGGCAAGGGGGTCTCCACCTTGCACTCCTGGTTCAGAGAGCAGATGTGCCTTTCTGTGGGCAGGAAGTAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS GCA 72 bp | CCCACAGAAAGGCACATCTGCTCTCTGAACCAGGAGTaGAAGGTGGAGACCCCCTTGCCCGAAGTGATGTGC | + |
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Preference number: 6 (lower is better) Translates to: PTERHICSLNQE*KVETPLPEVMC Trigger: GCACATCACTTCGGGCAAGGGGGTCTCCACCTTGCACTCCTGGTTCAGAGAGCAGATGTGCCTTTCTGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS CAA 90 bp | AGGCACATCTGCTCTCTGAACCAGGAGTGCAAGGTGGAGACCCCCTaGCCCGAAGTGATGTGCCAGAGCCTCTTTGACTTCCTGTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: RHICSLNQECKVETP*PEVMCQSLFDFLFH Trigger: GTGAAACAGGAAGTCAAAGAGGCTCTGGCACATCACTTCGGGCAAGGGGGTCTCCACCTTGCACTCCTGGTTCAGAGAGCAGATGTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS TCA 72 bp | ACCAGGAGTGCAAGGTGGAGACCCCCTTGCCCGAAGTaGTGTGCCAGAGCCTCTTTGACTTCCTGTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: TRSARWRPPCPK*CARASLTSCFT Trigger: TGTGAAACAGGAAGTCAAAGAGGCTCTGGCACATCACTTCGGGCAAGGGGGTCTCCACCTTGCACTCCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS CCA 72 bp | CACATACTTCTTGCTCAGCCTGCTGTGTGGATAACCTaGAGTGTCCAACACCTGGACCTGCAGGGCTACCTC | + |
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Preference number: 6 (lower is better) Translates to: HILLAQPAVWIT*SVQHLDLQGYL Trigger: GAGGTAGCCCTGCAGGTCCAGGTGTTGGACACTCCAGGTTATCCACACAGCAGGCTGAGCAAGAAGTATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS CCA 72 bp | TGTGGAGGTGACAACTGCGGCCCAGGCTACAACATGTaGTCACAGAACAGGGAGCAAAGCTGCTGTGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: CGGDNCGPGYNM*SQNREQSCCES Trigger: ACTTTCACAGCAGCTTTGCTCCCTGTTCTGTGACCACATGTTGTAGCCTGGGCCGCAGTTGTCACCTCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS GCA 72 bp | GAGTGCAAGGTGGAGACCCCCTTGCCCGAAGTGATGTaGCAGAGCCTCTTTGACTTCCTGTTTCACATACTT | + |
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Preference number: 6 (lower is better) Translates to: ECKVETPLPEVM*QSLFDFLFHIL Trigger: AAGTATGTGAAACAGGAAGTCAAAGAGGCTCTGGCACATCACTTCGGGCAAGGGGGTCTCCACCTTGCACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS CCA 72 bp | TTCCTGTTTCACATACTTCTTGCTCAGCCTGCTGTGTaGATAACCTGGAGTGTCCAACACCTGGACCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: FLFHILLAQPAV*ITWSVQHLDLQ Trigger: CTGCAGGTCCAGGTGTTGGACACTCCAGGTTATCCACACAGCAGGCTGAGCAAGAAGTATGTGAAACAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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| CDS GCA 72 bp | TCACAGAACAGGGAGCAAAGCTGCTGTGAAAGTCTGTaGTTCCCAGCAGAATGTTTCCAGCAGAACTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SQNREQSCCESL*FPAECFQQNFF Trigger: GAAAAAGTTCTGCTGGAAACATTCTGCTGGGAAGCACAGACTTTCACAGCAGCTTTGCTCCCTGTTCTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507153.2 ENST00000638719.4 |
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