RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GIMAP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000133561

Ensembl transcript IDs: ENST00000328902.9, ENST00000493969.2, ENST00000618759.4

Found 446 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGTTGAAGCCGCAATaGCGCCGTGCAAGGGTCACATCCAGCCAGGCAAGGGCCTGGTTG +
Preference number: 1 (lower is better)
Translates to: WASCSSPCALLLKPQ*RRARVTSSQARAWL
Trigger: CAACCAGGCCCTTGCCTGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR TCA 90 bp GCTCTCGCAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGTTaGAGCCGCAATGGCGCCGTGCAAGGGTCACATCCAGCCAGGCAA +
Preference number: 1 (lower is better)
Translates to: ALAVGPPAPPPVPCC*SRNGAVQGSHPARQ
Trigger: TTGCCTGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR GCA 90 bp CTGCTCCTCCCCCTGTGCCCTGTTGTTGAAGCCGCAATGGCGCCGTaGAAGGGTCACATCCAGCCAGGCAAGGGCCTGGTTGTTGGTCTC +
Preference number: 1 (lower is better)
Translates to: LLLPLCPVVEAAMAP*KGHIQPGKGLVVGL
Trigger: GAGACCAACAACCAGGCCCTTGCCTGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR CCA 90 bp GGCGCCGTGCAAGGGTCACATCCAGCCAGGCAAGGGCCTGGTTGTTaGTCTCTCGCACATAGTCTTCCAGGGAGCCGCCAGCCAGGTCTT +
Preference number: 1 (lower is better)
Translates to: GAVQGSHPARQGPGC*SLAHSLPGSRQPGL
Trigger: AAGACCTGGCTGGCGGCTCCCTGGAAGACTATGTGCGAGAGACCAACAACCAGGCCCTTGCCTGGCTGGATGTGACCCTTGCACGGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR GCA 90 bp TTTCTCCATGAGCTCTCGCAGTTGGGCCTCCTGCTCCTCCCCCTGTaGCCTGTTGTTGAAGCCGCAATGGCGCCGTGCAAGGGTCACATC +
Preference number: 1 (lower is better)
Translates to: FLHELSQLGLLLLPL*PVVEAAMAPCKGHI
Trigger: GATGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATGGAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR GCA 90 bp ATAATGGCTTCAACTTTCTCCATGAGCTCTCGCAGTTGGGCCTCCTaGTCCTCCCCCTGTGCCCTGTTGTTGAAGCCGCAATGGCGCCGT +
Preference number: 1 (lower is better)
Translates to: IMASTFSMSSRSWAS*SSPCALLLKPQWRR
Trigger: ACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATGGAGAAAGTTGAAGCCATTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR CCA 90 bp TTCCCCAGCAGGCATCTGTGGGCTTCCTCAGATTCCTTCTGGATCTaGGACAGTCCTTCCAGCCAAGACTCCTCACCAGGCACGTCCTCA +
Preference number: 1 (lower is better)
Translates to: FPSRHLWASSDSFWI*DSPSSQDSSPGTSS
Trigger: TGAGGACGTGCCTGGTGAGGAGTCTTGGCTGGAAGGACTGTCCCAGATCCAGAAGGAATCTGAGGAAGCCCACAGATGCCTGCTGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR CCA 90 bp GTCCTCAAGCCCCATGCCCCTCTTCCTACACCAGACGTCATGACCTaGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAACAGAGGG +
Preference number: 1 (lower is better)
Translates to: VLKPHAPLPTPDVMT*RLGSTPWDGKRNRG
Trigger: CCCTCTGTTTCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGGTGTAGGAAGAGGGGCATGGGGCTTGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR TCA 90 bp CTAGGGGCTTCCATGTTCTGTAGCCAGGGCAAGGGACCACCTACTTaGCCACAGTCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCC +
Preference number: 1 (lower is better)
Translates to: LGASMFCSQGKGPPT*PQSDFLDTLPQTSP
Trigger: GGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGACTGTGGTCAAGTAGGTGGTCCCTTGCCCTGGCTACAGAACATGGAAGCCCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CCA 90 bp AGTCCTTCCAGCCAAGACTCCTCACCAGGCACGTCCTCAGAGCCTTaGCCCTGGCTTACTTGCCTTTCCTGTAGTTCTTTCAGCCGAAAG +
Preference number: 1 (lower is better)
Translates to: SPSSQDSSPGTSSEP*PWLTCLSCSSFSRK
Trigger: CTTTCGGCTGAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCTCTGAGGACGTGCCTGGTGAGGAGTCTTGGCTGGAAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR TCA 90 bp TTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAAGGAATaGAGGAACTGGAATGTGATCTGGGCATGCTGGACCCTGTCCTCA +
Preference number: 1 (lower is better)
Translates to: LGHRGGRTQMFWKKE*RNWNVIWACWTLSS
Trigger: TGAGGACAGGGTCCAGCATGCCCAGATCACATTCCAGTTCCTTCATTCCTTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR TCA 90 bp CACATCAGTCTCCTCTTGCTGGCAGGCAGCTTCCTATCCGAGGCCTaGGACAGGATGACATCCTACTCCCTTCTCATCCTGTCCAGTATC +
Preference number: 1 (lower is better)
Translates to: HISLLLLAGSFLSEA*DRMTSYSLLILSSI
Trigger: GATACTGGACAGGATGAGAAGGGAGTAGGATGTCATCCTGTCTCAGGCCTCGGATAGGAAGCTGCCTGCCAGCAAGAGGAGACTGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 90 bp GAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGAGGCTGTaGCCTGAGATTTCTGATCATCTCCCAGCACTGTCTCCACCAGCT +
Preference number: 1 (lower is better)
Translates to: EHLQQWMSVQVDLRL*PEISDHLPALSPPA
Trigger: AGCTGGTGGAGACAGTGCTGGGAGATGATCAGAAATCTCAGGGCACAGCCTCAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 90 bp GCAAGGGACCACCTACTTGACCACAGTCTGACTTCTTGGATACCCTaGCCCAAACTTCTCCCATCATTCCCACTAGGAAGTTCCAACGGG +
Preference number: 1 (lower is better)
Translates to: ARDHLLDHSLTSWIP*PKLLPSFPLGSSNG
Trigger: CCCGTTGGAACTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGACTGTGGTCAAGTAGGTGGTCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 90 bp CTCCTTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTaGACACGCAGACACCCCATCCACATGCTCCCATTATCAAGGGAG +
Preference number: 1 (lower is better)
Translates to: LLALDPHKYFAREPV*TRRHPIHMLPLSRE
Trigger: CTCCCTTGATAATGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CCA 90 bp GTAGCCAGGGCAAGGGACCACCTACTTGACCACAGTCTGACTTCTTaGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGT +
Preference number: 1 (lower is better)
Translates to: VARARDHLLDHSLTS*IPCPKLLPSFPLGS
Trigger: ACTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGACTGTGGTCAAGTAGGTGGTCCCTTGCCCTGGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CCA 90 bp GTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAACAGTaGATGAGTGTCCAGGTAGACCTGAGGCTGTGCCCTGAGATTTCT +
Preference number: 1 (lower is better)
Translates to: VGCEHLCLAVEHLQQ*MSVQVDLRLCPEIS
Trigger: AGAAATCTCAGGGCACAGCCTCAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CCA 90 bp CATGGTGTGGGGAGAGATGAGAAGTCATCTGGTCAACAGCTTGCATaGAGTTGCCGCACCAAACGTGACTGCATGACTCCAATGCAGTCA +
Preference number: 1 (lower is better)
Translates to: HGVGRDEKSSGQQLA*SCRTKRDCMTPMQS
Trigger: TGACTGCATTGGAGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGACTTCTCATCTCTCCCCACACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR TCA 90 bp ACCAGACACAACAGGCACCTTAAACCATCATGGTGTGGGGAGAGATaGGAAGTCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAA +
Preference number: 1 (lower is better)
Translates to: TRHNRHLKPSWCGER*EVIWSTACMELPHQ
Trigger: TTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGACTTCTCATCTCTCCCCACACCATGATGGTTTAAGGTGCCTGTTGTGTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR TCA 90 bp TCCTCTTGCTGGCAGGCAGCTTCCTATCCGAGGCCTGAGACAGGATaGCATCCTACTCCCTTCTCATCCTGTCCAGTATCAGTACTTATA +
Preference number: 1 (lower is better)
Translates to: SSCWQAASYPRPETG*HPTPFSSCPVSVLI
Trigger: TATAAGTACTGATACTGGACAGGATGAGAAGGGAGTAGGATGTCATCCTGTCTCAGGCCTCGGATAGGAAGCTGCCTGCCAGCAAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 90 bp GTGGGGAGAGATGAGAAGTCATCTGGTCAACAGCTTGCATGGAGTTaGCGCACCAAACGTGACTGCATGACTCCAATGCAGTCAAAAGCT +
Preference number: 1 (lower is better)
Translates to: VGRDEKSSGQQLAWS*RTKRDCMTPMQSKA
Trigger: AGCTTTTGACTGCATTGGAGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGACTTCTCATCTCTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 90 bp GGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTaGCTCGCAAGATGTTTAAGTCACTCTACTGCTTCCTTTGCAGGC +
Preference number: 1 (lower is better)
Translates to: GKHHGLQSSPINQAG*LARCLSHSTASFAG
Trigger: GCCTGCAAAGGAAGCAGTAGAGTGACTTAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR TCA 90 bp GAAGTCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTaGCTGCATGACTCCAATGCAGTCAAAAGCTGTGGAAGTTACACA +
Preference number: 1 (lower is better)
Translates to: EVIWSTACMELPHQT*LHDSNAVKSCGSYT
Trigger: TGTGTAACTTCCACAGCTTTTGACTGCATTGGAGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 90 bp TCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTaGATGACTCCAATGCAGTCAAAAGCTGTGGAAGTTACACAGAAG +
Preference number: 1 (lower is better)
Translates to: SSGQQLAWSCRTKRD*MTPMQSKAVEVTQK
Trigger: CTTCTGTGTAACTTCCACAGCTTTTGACTGCATTGGAGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 90 bp GATTGTGGCACAAAGGCTGTCTTCAGCAAACACCAAATAACTCTGTaGTCTGCTTTGAGACACTTTTCTGAATCTGTTAGCAAGAGAAAT +
Preference number: 1 (lower is better)
Translates to: DCGTKAVFSKHQITL*SALRHFSESVSKRN
Trigger: ATTTCTCTTGCTAACAGATTCAGAAAAGTGTCTCAAAGCAGAGCACAGAGTTATTTGGTGTTTGCTGAAGACAGCCTTTGTGCCACAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR TCA 90 bp GTTGCATGTTCAGTTCAATGGGAAATTGATCGCTTATTTAATAAGTaGTTGTGGCACAAAGGCTGTCTTCAGCAAACACCAAATAACTCT +
Preference number: 1 (lower is better)
Translates to: VACSVQWEIDRLFNK*LWHKGCLQQTPNNS
Trigger: AGAGTTATTTGGTGTTTGCTGAAGACAGCCTTTGTGCCACAATCACTTATTAAATAAGCGATCAATTTCCCATTGAACTGAACATGCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CAA 90 bp AGCTCTCGCAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGTaGAAGCCGCAATGGCGCCGTGCAAGGGTCACATCCAGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SSRSWASCSSPCALL*KPQWRRARVTSSQA
Trigger: TGCCTGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR CAA 90 bp ATGAGCTCTCGCAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTaGTTGAAGCCGCAATGGCGCCGTGCAAGGGTCACATCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: MSSRSWASCSSPCAL*LKPQWRRARVTSSQ
Trigger: CTGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR TCA 90 bp CAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGTTGAAGCCGCAATGGCGGGTCTTCCTTCCGGGTaGACACCAGGATGGTGTGAC +
Preference number: 2 (lower is better)
Translates to: QLGLLLLPLCPVVEAAMAGLPSG*TPGWCD
Trigger: GTCACACCATCCTGGTGTTCACCCGGAAGGAAGACC...CGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR CCA 90 bp GGATCTGGGACAGTCCTTCCAGCCAAGACTCCTCACCAGGCACGTCCTCAGAGCATGAGCTCTCGCAGTTaGGCCTCCTGCTCCTCCCCC +
Preference number: 2 (lower is better)
Translates to: GSGTVLPAKTPHQARPQSMSSRS*ASCSSP
Trigger: GGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCAT...GCTCTGAGGACGTGCCTGGTGAGGAGTCTTGGCTGGAAGGACTGTCCCAGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR GCA 90 bp CGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCACCCGGGCTGCCCAAGTCCACTTaGATCCCTAGGGGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: RSTPQEHLGPQRRWGAPGLPKST*IPRGFH
Trigger: ATGGAAGCCCCTAGGGATGCAAGTGGACTTGGGCAG...CCCGGGTGCACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp AACTTTCTCCATGAGCTCTCGCAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTACTCCAAAGACCTCCTaGAGGCGCCTGACCACCTGC +
Preference number: 2 (lower is better)
Translates to: NFLHELSQLGLLLLPLCPTPKTS*RRLTTC
Trigger: GCAGGTGGTCAGGCGCCTGCAGGAGGTCTTTGGAGT...AGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATGGAGAAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR CCA 90 bp CAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGTTGAAGCCGCAATGGCGCAAGGGCCTGGTTGTTaGTCTCTCGCACATAGTCTT +
Preference number: 2 (lower is better)
Translates to: QLGLLLLPLCPVVEAAMAQGPGC*SLAHSL
Trigger: AAGACTATGTGCGAGAGACCAACAACCAGGCCCTTG...CGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR CCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGTCTACCTTGGTGGGGTaGTGTGACCTCCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVSTLVG*CDLLCP
Trigger: TGGGCAGAGGAGGTCACACCACCCCACCAAGGTAGA...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp CGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCACCCGGGTCCAGGAAAACATCATaGGCTTCAGAGTTCTCCCAT +
Preference number: 2 (lower is better)
Translates to: RSTPQEHLGPQRRWGAPGSRKTS*ASEFSH
Trigger: ATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGA...CCCGGGTGCACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp GAGCCTTGGCCCTGGCTTACTTGCCTTTCCTGTAGTTCTTTCAGCCGAAAGTTTCCTGTGCCCTGTTGTTaGAGCCGCAATGGCGCCGTG +
Preference number: 2 (lower is better)
Translates to: EPWPWLTCLSCSSFSRKFPVPCC*SRNGAV
Trigger: CACGGCGCCATTGCGGCTTCAACAACAGGGCACAGG...AAACTTTCGGCTGAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR GCA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGAAGGGCTGCTCCTCCTaGCTCCATCCCTGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLKGCSS*LHPCSC
Trigger: GCAGGAACAGGGATGGAGGCAGGAGGAGCAGCCCTT...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGAAAGGGCTGCTCCTCCTaGCTCCATCCCTGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: KHHGLQSSPINQAGCLARKGCSS*LHPCSC
Trigger: GCAGGAACAGGGATGGAGGCAGGAGGAGCAGCCCTT...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCATGGTGTGACCTCCTCTaGCCAAGTCCACTTGCATCC +
Preference number: 2 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPWCDLL*PSPLAS
Trigger: GGATGCAAGTGGACTTGGGCAGAGGAGGTCACACCA...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCACCAGACGTCATGACCTaGAGACTGGGAAGCACTCCA +
Preference number: 2 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPPDVMT*RLGSTP
Trigger: TGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGG...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAATCTACCTTGGTGGGGTaGTGTGACCTCCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQSTLVG*CDLLCP
Trigger: TGGGCAGAGGAGGTCACACCACCCCACCAAGGTAGA...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCTAAGTCTACCTTGGTaGGGTGGTGTGACCTCCTCT +
Preference number: 2 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVLSLPW*GGVTSS
Trigger: AGAGGAGGTCACACCACCCCACCAAGGTAGACTTAG...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGTCCCCAGGAGCATCTTaGACCTCAAAGGAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRSPGAS*TSKEVG
Trigger: CCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGA...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGTGTCCTCAAGCCCCATaGCCCTCTTCCTACACCAGA +
Preference number: 2 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRCPQAP*PSSYTR
Trigger: TCTGGTGTAGGAAGAGGGGCATGGGGCTTGAGGACA...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGGCTAGGGAACCCGTTTaGACACGCAGACACCCCATC +
Preference number: 2 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRAREPV*TRRHPI
Trigger: GATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGC...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGGTGATCTGGGCATGCTaGACCCTGTCCTCAAGCCCC +
Preference number: 2 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKVIWAC*TLSSSP
Trigger: GGGGCTTGAGGACAGGGTCCAGCATGCCCAGATCAC...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGAAAGACAGCGTGCTGTTaGGGCACAGAGGAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: KHHGLQSSPINQAGCLARKTACC*GTEEGG
Trigger: TCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTT...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAAAGGCCTGAGACAGGATaGCATCCTACTCCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQRPETG*HPTPFS
Trigger: TGAGAAGGGAGTAGGATGTCATCCTGTCTCAGGCCT...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGAATAGGAAGACAGCGTaGTGTTGGGGCACAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRNRKTA*CWGTEE
Trigger: CTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATT...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGACAGCTTGCATGGAGTTaGCGCACCAAACGTGACTGC +
Preference number: 2 (lower is better)
Translates to: KHHGLQSSPINQAGCLARQLAWS*RTKRDC
Trigger: GCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTG...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGCTGCCCAAGTCCACTTaGATCCCTAGGGGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLLPKST*IPRGFH
Trigger: ATGGAAGCCCCTAGGGATGCAAGTGGACTTGGGCAG...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGTGGTGTGACCTCCTCTaGCCAAGTCCACTTGCATCC +
Preference number: 2 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRWCDLL*PSPLAS
Trigger: GGATGCAAGTGGACTTGGGCAGAGGAGGTCACACCA...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGTTTAAGTCACTCTACTaGTTCCTTTGCAGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVFKSLY*FLCRPP
Trigger: AGGGGGCCTGCAAAGGAAGCAGTAGAGTGACTTAAA...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCCAGACGTCATGACCTaGAGACTGGGAAGCACTCCA +
Preference number: 2 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRPDVMT*RLGSTP
Trigger: TGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGG...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAAGGTCAACAGCTTGCATaGAGTTGCCGCACCAAACGT +
Preference number: 2 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQGQQLA*SCRTKR
Trigger: ACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACC...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATTGCCGCACCAAACGTaGCTGCATGACTCCAATGCA +
Preference number: 2 (lower is better)
Translates to: KHHGLQSSPINQAGCLARLPHQT*LHDSNA
Trigger: TGCATTGGAGTCATGCAGTCACGTTTGGTGCGGCAA...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAATGGTGTGGGGAGAGATaGGAAGTCATCTGGTCAACA +
Preference number: 2 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQWCGER*EVIWST
Trigger: TGTTGACCAGATGACTTCTCATCTCTCCCCACACCA...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGTGTCCTCAAGCCCCATaGCCCTCTTCCTACACCAGA +
Preference number: 2 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKCPQAP*PSSYTR
Trigger: TCTGGTGTAGGAAGAGGGGCATGGGGCTTGAGGACA...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGAATAGGAAGACAGCGTaGTGTTGGGGCACAGAGGAG +
Preference number: 2 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRNRKTA*CWGTEE
Trigger: CTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATT...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCAACTTCTTGGATACCCTaGCCCAAACTTCTCCCATCA +
Preference number: 2 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPTSWIP*PKLLPS
Trigger: TGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGT...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAGCTAGGGAACCCGTTTaGACACGCAGACACCCCATC +
Preference number: 2 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGAREPV*TRRHPI
Trigger: GATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGC...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGACTAAGTCTACCTTGGTaGGGTGGTGTGACCTCCTCT +
Preference number: 2 (lower is better)
Translates to: KHHGLQSSPINQAGCLARLSLPW*GGVTSS
Trigger: AGAGGAGGTCACACCACCCCACCAAGGTAGACTTAG...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGAAAGGGACCACCTACTTaGCCACAGTCTGACTTCTTG +
Preference number: 2 (lower is better)
Translates to: KHHGLQSSPINQAGCLARKGPPT*PQSDFL
Trigger: CAAGAAGTCAGACTGTGGTCAAGTAGGTGGTCCCTT...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp CATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATGTTTATATCATGAGGGGCCATaGAACCCATGGAAAAAGGGG +
Preference number: 2 (lower is better)
Translates to: HGLQSSPINQAGCLARCLYHEGP*NPWKKG
Trigger: CCCCTTTTTCCATGGGTTTCATGGCCCCTCATGATA...TAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAAAGAAGGCAAATATCATaGGGGGCCATGAAACCCATG +
Preference number: 2 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQRRQIS*GAMKPM
Trigger: CATGGGTTTCATGGCCCCTCATGATATTTGCCTTCT...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGACGCACCAAACGTGACTaGATGACTCCAATGCAGTCA +
Preference number: 2 (lower is better)
Translates to: KHHGLQSSPINQAGCLARRTKRD*MTPMQS
Trigger: TGACTGCATTGGAGTCATGCAGTCACGTTTGGTGCG...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACAGCTTGCATGGAGTTaGCGCACCAAACGTGACTGC +
Preference number: 2 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGQLAWS*RTKRDC
Trigger: GCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTG...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGATGTCTCAGCACCACTaGCATGTTCCAGCCACCAGA +
Preference number: 2 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKMSQHH*HVPATR
Trigger: TCTGGTGGCTGGAACATGGCAGTGGTGCTGAGACAT...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp CATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATGTTTAGACACCCCATCCACATaGTCCCATTATCAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: HGLQSSPINQAGCLARCLDTPST*SHYQGR
Trigger: TCTCCCTTGATAATGGGAGCATGTGGATGGGGTGTC...TAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGTCTTCCCTGCCTCCTTaGATTGGACCCCCACAAATA +
Preference number: 2 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRSSLPP*IGPPQI
Trigger: TATTTGTGGGGGTCCAATGCAAGGAGGCAGGGAAGA...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGGTAGACCTGAGGCTGTaGCCTGAGATTTCTGATCAT +
Preference number: 2 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRVDLRL*PEISDH
Trigger: ATGATCAGAAATCTCAGGGCACAGCCTCAGGTCTAC...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp GAAAGTTTTGCTGGGTATATTGGTAAGCCTTGTTGCTGTAATAATCTCCTTCGTCGCAGTTGGGCCTCCTaGTCCTCCCCCTGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: ESFAGYIGKPCCCNNLLRRSWAS*SSPCAL
Trigger: CAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCG...ACGAAGGAGATTATTACAGCAACAAGGCTTACCAATATACCCAGCAAAACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR TCA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACCCAAACGTGACTGCATaGCTCCAATGCAGTCAAAAG +
Preference number: 2 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADPNVTA*LQCSQK
Trigger: CTTTTGACTGCATTGGAGTCATGCAGTCACGTTTGG...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAAGGCCTGAGACAGGATaGCATCCTACTCCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGRPETG*HPTPFS
Trigger: TGAGAAGGGAGTAGGATGTCATCCTGTCTCAGGCCT...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGATTCCTATCCGAGGCCTaGGACAGGATGACATCCTAC +
Preference number: 2 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGFLSEA*DRMTSY
Trigger: GTAGGATGTCATCCTGTCTCAGGCCTCGGATAGGAA...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGGTTGAAAGTAGTCTGTaGCTTCTAGGAGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRVESSL*LLGAEG
Trigger: GCCTTCTGCTCCTAGAAGGCACAGACTACTTTCAAC...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp GTAAGCCTTGTTGCTGTAATAATCTCCTTCGTTTTCCCACATAATGGCTTCAACGCCGCAATGGCGCCGTaGAAGGGTCACATCCAGCCA +
Preference number: 2 (lower is better)
Translates to: VSLVAVIISFVFPHNGFNAAMAP*KGHIQP
Trigger: TGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGC...GTTGAAGCCATTATGTGGGAAAACGAAGGAGATTATTACAGCAACAAGGCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR CCA 90 bp TCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTGCATGACTAAGCACTCCATGGGATaGAAAGAGAAACAGAGGGCT +
Preference number: 2 (lower is better)
Translates to: SSGQQLAWSCRTKRDCMTKHSMG*KEKQRA
Trigger: AGCCCTCTGTTTCTCTTTCCATCCCATGGAGTGCTT...AGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTCCTGCCTCCTTGCATTaGACCCCCACAAATACTTTG +
Preference number: 2 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLPASLH*TPTNTL
Trigger: CAAAGTATTTGTGGGGGTCCAATGCAAGGAGGCAGG...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGTTACAGCTCAAGAGTaGATAAAAGGGCTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLVTAQE*IKGLLL
Trigger: GAGGAGCAGCCCTTTTATTCACTCTTGAGCTGTAAC...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGTTGAAAGTAGTCTGTaGCTTCTAGGAGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLVESSL*LLGAEG
Trigger: GCCTTCTGCTCCTAGAAGGCACAGACTACTTTCAAC...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGAAGCACTCCATGGGATaGAAAGAGAAACAGAGGGCT +
Preference number: 2 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKKHSMG*KEKQRA
Trigger: AGCCCTCTGTTTCTCTTTCCATCCCATGGAGTGCTT...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTGCCTCCTTGCATTaGACCCCCACAAATACTTTG +
Preference number: 2 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGPASLH*TPTNTL
Trigger: CAAAGTATTTGTGGGGGTCCAATGCAAGGAGGCAGG...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp CATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATGTTTATTCTGGAAGAAGGAATaGAGGAACTGGAATGTGATC +
Preference number: 2 (lower is better)
Translates to: HGLQSSPINQAGCLARCLFWKKE*RNWNVI
Trigger: GATCACATTCCAGTTCCTTCATTCCTTCTTCCAGAA...TAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATATGTCTCAGCACCACTaGCATGTTCCAGCCACCAGA +
Preference number: 2 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYMSQHH*HVPATR
Trigger: TCTGGTGGCTGGAACATGGCAGTGGTGCTGAGACAT...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGGCCCTCAAGAAACTTTaGTTCTATCAGAGTATAGAC +
Preference number: 2 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRALKKL*FYQSID
Trigger: GTCTATACTCTGATAGAACCAAAGTTTCTTGAGGGC...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGAAAAGAGGAATATATTaGGGAGCAGTTTCCCCAATG +
Preference number: 2 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRKRGIY*GAVSPM
Trigger: CATTGGGGAAACTGCTCCCCAATATATTCCTCTTTT...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp CATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATGTTTAACTCATGAAAGGCAATaGAATGAGATAGAAGGTCCA +
Preference number: 2 (lower is better)
Translates to: HGLQSSPINQAGCLARCLTHERQ*NEIEGP
Trigger: TGGACCTTCTATCTCATTGCATTGCCTTTCATGAGT...TAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGATCCAGGAAAACATCATaGGCTTCAGAGTTCTCCCAT +
Preference number: 2 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGSRKTS*ASEFSH
Trigger: ATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGA...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp TTACTTGCCTTTCCTGTAGTTCTTTCAGCCGAAAGTTTTGCTGGGTATATTGGTTTGTTGAAGCCGCAATaGCGCCGTGCAAGGGTCACA +
Preference number: 2 (lower is better)
Translates to: LLAFPVVLSAESFAGYIGLLKPQ*RRARVT
Trigger: TGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAA...ACCAATATACCCAGCAAAACTTTCGGCTGAAAGAACTACAGGAAAGGCAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR TCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATCCAAACGTGACTGCATaGCTCCAATGCAGTCAAAAG +
Preference number: 2 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYPNVTA*LQCSQK
Trigger: CTTTTGACTGCATTGGAGTCATGCAGTCACGTTTGG...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp CATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATGTTTATGCAGTCAAAAGCTGTaGAAGTTACACAGAAGTAAA +
Preference number: 2 (lower is better)
Translates to: HGLQSSPINQAGCLARCLCSQKL*KLHRSK
Trigger: TTTACTTCTGTGTAACTTCCACAGCTTTTGACTGCA...TAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATCACAGTCTGACTTCTTaGATACCCTGCCCCAAACTT +
Preference number: 2 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHHSLTS*IPCPKL
Trigger: AAGTTTGGGGCAGGGTATCCAAGAAGTCAGACTGTG...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATATAAACCAGGCAGGCTaGCTCGCAAGATGTTTAAGT +
Preference number: 2 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHINQAG*LARCLS
Trigger: ACTTAAACATCTTGCGAGGCAGCCTGCCTGGTTTAT...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATTTCTGGAAGAAGGAATaGAGGAACTGGAATGTGATC +
Preference number: 2 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHFWKKE*RNWNVI
Trigger: GATCACATTCCAGTTCCTTCATTCCTTCTTCCAGAA...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGATGCAGTCAAAAGCTGTaGAAGTTACACAGAAGTAAA +
Preference number: 2 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGCSQKL*KLHRSK
Trigger: TTTACTTCTGTGTAACTTCCACAGCTTTTGACTGCA...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTCTCTACTGCTTCCTTTaGAGGCCCCCTTTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: SVALEFQVCSLRNKMALILYCFL*RPPFFP
Trigger: AGGGAAGAAAGGGGGCCTGCAAAGGAAGCAGTAGAG...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CAA 90 bp ACAAAGGCTGTCTTCAGCAAACACCAAATAACTCTGTGCTCTGCTTaGAGACACTTTTCTGAATCTGTTAGCAAGAGAAATGCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: TKAVFSKHQITLCSA*RHFSESVSKRNAEA
Trigger: AGCTTCAGCATTTCTCTTGCTAACAGATTCAGAAAAGTGTCTCAAAGCAGAGCACAGAGTTATTTGGTGTTTGCTGAAGACAGCCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTTACTTGACCACAGTCTaGCTTCTTGGATACCCTGCC +
Preference number: 2 (lower is better)
Translates to: SVALEFQVCSLRNKMALIYLTTV*LLGYPA
Trigger: GGCAGGGTATCCAAGAAGTCAGACTGTGGTCAAGTA...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTAAGGGACCACCTACTTaGCCACAGTCTGACTTCTTG +
Preference number: 2 (lower is better)
Translates to: SVALEFQVCSLRNKMALIKGPPT*PQSDFL
Trigger: CAAGAAGTCAGACTGTGGTCAAGTAGGTGGTCCCTT...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTGTTACAGCTCAAGAGTaGATAAAAGGGCTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: SVALEFQVCSLRNKMALIVTAQE*IKGLLL
Trigger: GAGGAGCAGCCCTTTTATTCACTCTTGAGCTGTAAC...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR TCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTAGAAGGCAAATATCATaGGGGGCCATGAAACCCATG +
Preference number: 2 (lower is better)
Translates to: SVALEFQVCSLRNKMALIRRQIS*GAMKPM
Trigger: CATGGGTTTCATGGCCCCTCATGATATTTGCCTTCT...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTACTTCTTGGATACCCTaGCCCAAACTTCTCCCATCA +
Preference number: 2 (lower is better)
Translates to: SVALEFQVCSLRNKMALITSWIP*PKLLPS
Trigger: TGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGT...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR GCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTTTTAAGTCACTCTACTaGTTCCTTTGCAGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: SVALEFQVCSLRNKMALIFKSLY*FLCRPP
Trigger: AGGGGGCCTGCAAAGGAAGCAGTAGAGTGACTTAAA...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 72 bp GAGCTCTCGCAGTTGGGCCTCCTGCTCCTCCCCCTGTaGCCTGTTGTTGAAGCCGCAATGGCGCCGTGCAAG +
Preference number: 3 (lower is better)
Translates to: ELSQLGLLLLPL*PVVEAAMAPCK
Trigger: CTTGCACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR TCA 72 bp GTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGTTaGAGCCGCAATGGCGCCGTGCAAGGGTCACATCCA +
Preference number: 3 (lower is better)
Translates to: VGPPAPPPVPCC*SRNGAVQGSHP
Trigger: TGGATGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR GCA 72 bp CCCCTGTGCCCTGTTGTTGAAGCCGCAATGGCGCCGTaGAAGGGTCACATCCAGCCAGGCAAGGGCCTGGTT +
Preference number: 3 (lower is better)
Translates to: PLCPVVEAAMAP*KGHIQPGKGLV
Trigger: AACCAGGCCCTTGCCTGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR CCA 72 bp GTGGGGTGCACCCGGGGCACATCAGTCTCCTCTTGCTaGCAGGCAGCTTCCTATCCGAGGCCTGAGACAGGA +
Preference number: 3 (lower is better)
Translates to: VGCTRGTSVSSC*QAASYPRPETG
Trigger: TCCTGTCTCAGGCCTCGGATAGGAAGCTGCCTGCCAGCAAGAGGAGACTGATGTGCCCCGGGTGCACCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CCA 72 bp TGCTCCTCCCCCTGTGCCCTGTTGTTGAAGCCGCAATaGCGCCGTGCAAGGGTCACATCCAGCCAGGCAAGG +
Preference number: 3 (lower is better)
Translates to: CSSPCALLLKPQ*RRARVTSSQAR
Trigger: CCTTGCCTGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR CAA 90 bp GGATCTGGGACAGTCCTTCCAGCCAAGACTCCTCACCAGGCACGTCCTCAGAGCTCCCCCTGTGCCCTGTaGTTGAAGCCGCAATGGCGC +
Preference number: 3 (lower is better)
Translates to: GSGTVLPAKTPHQARPQSSPCAL*LKPQWR
Trigger: GCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGA...GCTCTGAGGACGTGCCTGGTGAGGAGTCTTGGCTGGAAGGACTGTCCCAGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR CAA 90 bp GGCAAGGGCCTGGTTGTTGGTCTCTCGCACATAGTCTTCCAGGGAGCCGCCAGCAGGCTGATGGTGTCCTaGGCTCAAGTCCAGCACAGG +
Preference number: 3 (lower is better)
Translates to: GKGLVVGLSHIVFQGAASRLMVS*AQVQHR
Trigger: CCTGTGCTGGACTTGAGCCAAGGACACCATCAGCCT...GCTGGCGGCTCCCTGGAAGACTATGTGCGAGAGACCAACAACCAGGCCCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR CAA 90 bp CGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCACCCGGGCATCTGGTCAACAGCTaGCATGGAGTTGCCGCACCA +
Preference number: 3 (lower is better)
Translates to: RSTPQEHLGPQRRWGAPGHLVNS*HGVAAP
Trigger: TGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATG...CCCGGGTGCACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 72 bp TCAACTTTCTCCATGAGCTCTCGCAGTTGGGCCTCCTaGTCCTCCCCCTGTGCCCTGTTGTTGAAGCCGCAA +
Preference number: 3 (lower is better)
Translates to: STFSMSSRSWAS*SSPCALLLKPQ
Trigger: TTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATGGAGAAAGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR-3UTR CAA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGGAAGGGCGAGGCAGGTaGAAAGTAGTCTGTGCCTTC +
Preference number: 3 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVEGRGR*KVVCAF
Trigger: GAAGGCACAGACTACTTTCAACCTGCCTCGCCCTTC...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGACTCTACTGCTTCCTTaGCAGGCCCCCTTTCTTCCC +
Preference number: 3 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVTLLLP*QAPFLP
Trigger: GGGAAGAAAGGGGGCCTGCAAAGGAAGCAGTAGAGT...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR TCA 72 bp CTCCTCTTGCTGGCAGGCAGCTTCCTATCCGAGGCCTaGGACAGGATGACATCCTACTCCCTTCTCATCCTG +
Preference number: 3 (lower is better)
Translates to: LLLLAGSFLSEA*DRMTSYSLLIL
Trigger: CAGGATGAGAAGGGAGTAGGATGTCATCCTGTCTCAGGCCTCGGATAGGAAGCTGCCTGCCAGCAAGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 72 bp TCTAAGTCTACCTTGGTGGGGTGGTGTGACCTCCTCTaGCCAAGTCCACTTGCATCCCTAGGGGCTTCCATG +
Preference number: 3 (lower is better)
Translates to: SKSTLVGWCDLL*PSPLASLGASM
Trigger: CATGGAAGCCCCTAGGGATGCAAGTGGACTTGGGCAGAGGAGGTCACACCACCCCACCAAGGTAGACTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CCA 72 bp CCCCATGCCCCTCTTCCTACACCAGACGTCATGACCTaGAGACTGGGAAGCACTCCATGGGATGGAAAGAGA +
Preference number: 3 (lower is better)
Translates to: PHAPLPTPDVMT*RLGSTPWDGKR
Trigger: TCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGGTGTAGGAAGAGGGGCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CCA 72 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATaGCTTCAGAGCAAGAGGCCACAGGTCGGCTGTGAG +
Preference number: 3 (lower is better)
Translates to: SQMSAVSREDGG*LQSKRPQVGCE
Trigger: CTCACAGCCGACCTGTGGCCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAAAGGCTGATGGTGTCCTaGGCTCAAGTCCAGCACAGG +
Preference number: 3 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQRLMVS*AQVQHR
Trigger: CCTGTGCTGGACTTGAGCCAAGGACACCATCAGCCT...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CCA 72 bp ATAATGGCTTCAACTTTCTCCATGAGCTCTCGCAGTTaGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGTTG +
Preference number: 3 (lower is better)
Translates to: IMASTFSMSSRS*ASCSSPCALLL
Trigger: CAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATGGAGAAAGTTGAAGCCATTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR CCA 72 bp AGCCAAGACTCCTCACCAGGCACGTCCTCAGAGCCTTaGCCCTGGCTTACTTGCCTTTCCTGTAGTTCTTTC +
Preference number: 3 (lower is better)
Translates to: SQDSSPGTSSEP*PWLTCLSCSSF
Trigger: GAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCTCTGAGGACGTGCCTGGTGAGGAGTCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
3UTR TCA 72 bp TCCATGTTCTGTAGCCAGGGCAAGGGACCACCTACTTaGCCACAGTCTGACTTCTTGGATACCCTGCCCCAA +
Preference number: 3 (lower is better)
Translates to: SMFCSQGKGPPT*PQSDFLDTLPQ
Trigger: TTGGGGCAGGGTATCCAAGAAGTCAGACTGTGGTCAAGTAGGTGGTCCCTTGCCCTGGCTACAGAACATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR TCA 72 bp TGGCAGGCAGCTTCCTATCCGAGGCCTGAGACAGGATaGCATCCTACTCCCTTCTCATCCTGTCCAGTATCA +
Preference number: 3 (lower is better)
Translates to: WQAASYPRPETG*HPTPFSSCPVS
Trigger: TGATACTGGACAGGATGAGAAGGGAGTAGGATGTCATCCTGTCTCAGGCCTCGGATAGGAAGCTGCCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CCA 72 bp GAGCATCTGTGTCTAGCTGTTGAGCATCTCCAACAGTaGATGAGTGTCCAGGTAGACCTGAGGCTGTGCCCT +
Preference number: 3 (lower is better)
Translates to: EHLCLAVEHLQQ*MSVQVDLRLCP
Trigger: AGGGCACAGCCTCAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAGATGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTAGGCTGATGGTGTCCTaGGCTCAAGTCCAGCACAGG +
Preference number: 3 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLRLMVS*AQVQHR
Trigger: CCTGTGCTGGACTTGAGCCAAGGACACCATCAGCCT...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGTTCTTCCCTGCCTCCTaGCATTGGACCCCCACAAAT +
Preference number: 3 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRFFPAS*HWTPTN
Trigger: ATTTGTGGGGGTCCAATGCAAGGAGGCAGGGAAGAA...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 72 bp TTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTaGACACGCAGACACCCCATCCACATGCTCCCATTA +
Preference number: 3 (lower is better)
Translates to: LDPHKYFAREPV*TRRHPIHMLPL
Trigger: TAATGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 72 bp CAACAGTGGATGAGTGTCCAGGTAGACCTGAGGCTGTaGCCTGAGATTTCTGATCATCTCCCAGCACTGTCT +
Preference number: 3 (lower is better)
Translates to: QQWMSVQVDLRL*PEISDHLPALS
Trigger: AGACAGTGCTGGGAGATGATCAGAAATCTCAGGGCACAGCCTCAGGTCTACCTGGACACTCATCCACTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CCA 72 bp GGGAGAGATGAGAAGTCATCTGGTCAACAGCTTGCATaGAGTTGCCGCACCAAACGTGACTGCATGACTCCA +
Preference number: 3 (lower is better)
Translates to: GRDEKSSGQQLA*SCRTKRDCMTP
Trigger: TGGAGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGACTTCTCATCTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CCA 72 bp GCAAGGGACCACCTACTTGACCACAGTCTGACTTCTTaGATACCCTGCCCCAAACTTCTCCCATCATTCCCA +
Preference number: 3 (lower is better)
Translates to: ARDHLLDHSLTS*IPCPKLLPSFP
Trigger: TGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGACTGTGGTCAAGTAGGTGGTCCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCCACAGTCTGACTTCTaGGATACCCTGCCCCAAACT +
Preference number: 3 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRPQSDF*DTLPQT
Trigger: AGTTTGGGGCAGGGTATCCAAGAAGTCAGACTGTGG...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGAAGTTCCAACGGGGCTaGTTTGTTACAGCTCAAGAG +
Preference number: 3 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRKFQRG*FVTAQE
Trigger: CTCTTGAGCTGTAACAAACAAGCCCCGTTGGAACTT...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTTTCTTCCCTGCCTCCTaGCATTGGACCCCCACAAAT +
Preference number: 3 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLFFPAS*HWTPTN
Trigger: ATTTGTGGGGGTCCAATGCAAGGAGGCAGGGAAGAA...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAACTCTACTGCTTCCTTaGCAGGCCCCCTTTCTTCCC +
Preference number: 3 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGTLLLP*QAPFLP
Trigger: GGGAAGAAAGGGGGCCTGCAAAGGAAGCAGTAGAGT...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR TCA 72 bp TGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTaGCTGCATGACTCCAATGCAGTCAAAAGCTGTGGA +
Preference number: 3 (lower is better)
Translates to: WSTACMELPHQT*LHDSNAVKSCG
Trigger: TCCACAGCTTTTGACTGCATTGGAGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 72 bp GATGAGAAGTCATCTGGTCAACAGCTTGCATGGAGTTaGCGCACCAAACGTGACTGCATGACTCCAATGCAG +
Preference number: 3 (lower is better)
Translates to: DEKSSGQQLAWS*RTKRDCMTPMQ
Trigger: CTGCATTGGAGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGACTTCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 72 bp CATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTaGCTCGCAAGATGTTTAAGTCACTCTACTGCTTCC +
Preference number: 3 (lower is better)
Translates to: HGLQSSPINQAG*LARCLSHSTAS
Trigger: GGAAGCAGTAGAGTGACTTAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CCA 72 bp CAGATGCAAGTCATCTCTAATCTAAGTCTACCTTGGTaGGGTGGTGTGACCTCCTCTGCCCAAGTCCACTTG +
Preference number: 3 (lower is better)
Translates to: QMQVISNLSLPW*GGVTSSAQVHL
Trigger: CAAGTGGACTTGGGCAGAGGAGGTCACACCACCCCACCAAGGTAGACTTAGATTAGAGATGACTTGCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR TCA 72 bp AGCTTGCATGGAGTTGCCGCACCAAACGTGACTGCATaGCTCCAATGCAGTCAAAAGCTGTGGAAGTTACAC +
Preference number: 3 (lower is better)
Translates to: SLHGVAAPNVTA*LQCSQKLWKLH
Trigger: GTGTAACTTCCACAGCTTTTGACTGCATTGGAGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 72 bp CAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTaGATGACTCCAATGCAGTCAAAAGCTGTGGAAGTT +
Preference number: 3 (lower is better)
Translates to: QQLAWSCRTKRD*MTPMQSKAVEV
Trigger: AACTTCCACAGCTTTTGACTGCATTGGAGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 72 bp CACCTACTTGACCACAGTCTGACTTCTTGGATACCCTaGCCCAAACTTCTCCCATCATTCCCACTAGGAAGT +
Preference number: 3 (lower is better)
Translates to: HLLDHSLTSWIP*PKLLPSFPLGS
Trigger: ACTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGACTGTGGTCAAGTAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATCATCTGGTCAACAGCTaGCATGGAGTTGCCGCACCA +
Preference number: 3 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHHLVNS*HGVAAP
Trigger: TGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATG...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGTCCAACGGGGCTTGTTaGTTACAGCTCAAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKSNGAC*LQLKSE
Trigger: TTCACTCTTGAGCTGTAACAAACAAGCCCCGTTGGA...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTTCCAACGGGGCTTGTTaGTTACAGCTCAAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLSNGAC*LQLKSE
Trigger: TTCACTCTTGAGCTGTAACAAACAAGCCCCGTTGGA...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAACCCCCACAAATACTTaGCTAGGGAACCCGTTTGCA +
Preference number: 3 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGTPTNT*LGNPFA
Trigger: TGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGT...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR TCA 72 bp AACAGGCACCTTAAACCATCATGGTGTGGGGAGAGATaGGAAGTCATCTGGTCAACAGCTTGCATGGAGTTG +
Preference number: 3 (lower is better)
Translates to: NRHLKPSWCGER*EVIWSTACMEL
Trigger: CAACTCCATGCAAGCTGTTGACCAGATGACTTCTCATCTCTCCCCACACCATGATGGTTTAAGGTGCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATCCCTGCCTCCTTGCATaGGACCCCCACAAATACTTT +
Preference number: 3 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYPCLLA*DPHKYF
Trigger: AAAGTATTTGTGGGGGTCCAATGCAAGGAGGCAGGG...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTCCACAGTCTGACTTCTaGGATACCCTGCCCCAAACT +
Preference number: 3 (lower is better)
Translates to: SVALEFQVCSLRNKMALIPQSDF*DTLPQT
Trigger: AGTTTGGGGCAGGGTATCCAAGAAGTCAGACTGTGG...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR-3UTR CAA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTAAGTTCCAACGGGGCTaGTTTGTTACAGCTCAAGAG +
Preference number: 3 (lower is better)
Translates to: SVALEFQVCSLRNKMALIKFQRG*FVTAQE
Trigger: CTCTTGAGCTGTAACAAACAAGCCCCGTTGGAACTT...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR GCA 72 bp CTATCAGAGTATAGACAAGTAACTCATGAAAGGCAATaGAATGAGATAGAAGGTCCAATAGGAAGACAGCGT +
Preference number: 3 (lower is better)
Translates to: LSEYRQVTHERQ*NEIEGPIGRQR
Trigger: ACGCTGTCTTCCTATTGGACCTTCTATCTCATTGCATTGCCTTTCATGAGTTACTTGTCTATACTCTGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp GAAGCCGCAATGGCGCCGTGCAAGGGTCACATCCAGCCAGGCAAGGGCCTGGTTACCAGGAGCACGGCGTaGGGCCCTGGGGCGGATAAG +
Preference number: 4 (lower is better)
Translates to: EAAMAPCKGHIQPGKGLVTRSTA*GPGADK
Trigger: CTTATCCGCCCCAGGGCCCCACGCCGTGCTCCTGGT...AACCAGGCCCTTGCCTGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR TCA 90 bp CGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCACCCGGGCCTCCTGCAGGCGCCTaGCCACCTGCTGATCCTCAT +
Preference number: 4 (lower is better)
Translates to: RSTPQEHLGPQRRWGAPGPPAGA*PPADPH
Trigger: ATGAGGATCAGCAGGTGGTCAGGCGCCTGCAGGAGG...CCCGGGTGCACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp GAAGCCGCAATGGCGCCGTGCAAGGGTCACATCCAGCCAGGCAAGGGCCTGGTTCCTGTGCCCTGTTGTTaGAGCCGCAATGGCGCCGTG +
Preference number: 4 (lower is better)
Translates to: EAAMAPCKGHIQPGKGLVPVPCC*SRNGAV
Trigger: CACGGCGCCATTGCGGCTTCAACAACAGGGCACAGG...AACCAGGCCCTTGCCTGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR TCA 90 bp ACTTTCTCCATGAGCTCTCGCAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGCGCCTGACCACCTGCTaGTCCTCATCCGTGAACCGG +
Preference number: 4 (lower is better)
Translates to: TFSMSSRSWASCSSPCALRLTTC*SSSVNR
Trigger: CCGGTTCACGGATGAGGATCAGCAGGTGGTCAGGCG...CAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATGGAGAAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR GCA 90 bp CAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGTTGAAGCCGCAATGGCGACTCCAAAGACCTCCTaGAGGCGCCTGACCACCTGC +
Preference number: 4 (lower is better)
Translates to: QLGLLLLPLCPVVEAAMATPKTS*RRLTTC
Trigger: GCAGGTGGTCAGGCGCCTGCAGGAGGTCTTTGGAGT...CGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR GCA 90 bp ACTTTCTCCATGAGCTCTCGCAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGGCCGCAATGGCGCCGTaGAAGGGTCACATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TFSMSSRSWASCSSPCALAAMAP*KGHIQP
Trigger: TGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGC...CAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATGGAGAAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR GCA 90 bp CGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCACCCGGGCTGCTCCTCCCCCTGTaGCCTGTTGTTGAAGCCGCA +
Preference number: 4 (lower is better)
Translates to: RSTPQEHLGPQRRWGAPGLLLPL*PVVEAA
Trigger: TGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAG...CCCGGGTGCACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGTTGAAGCCGCAATGGCGCTGCTCCTCCCCCTGTaGCCTGTTGTTGAAGCCGCA +
Preference number: 4 (lower is better)
Translates to: QLGLLLLPLCPVVEAAMALLLPL*PVVEAA
Trigger: TGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAG...CGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR TCA 90 bp CGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCACCCGGGGCTGATCCTCATCCGTaGACCGGCCCAGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: RSTPQEHLGPQRRWGAPGADPHP*TGPVVS
Trigger: TGACACAACTGGGCCGGTTCACGGATGAGGATCAGC...CCCGGGTGCACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp GGATCTGGGACAGTCCTTCCAGCCAAGACTCCTCACCAGGCACGTCCTCAGAGCCCTCCTGCAGGCGCCTaGCCACCTGCTGATCCTCAT +
Preference number: 4 (lower is better)
Translates to: GSGTVLPAKTPHQARPQSPPAGA*PPADPH
Trigger: ATGAGGATCAGCAGGTGGTCAGGCGCCTGCAGGAGG...GCTCTGAGGACGTGCCTGGTGAGGAGTCTTGGCTGGAAGGACTGTCCCAGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR TCA 90 bp GGAGCCGCCAGCCAGGTCTTCCTTCCGGGTGAACACCAGGATGGTGTGACCCAGGGTCTTCCTTCCGGGTaGACACCAGGATGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GAASQVFLPGEHQDGVTQGLPSG*TPGWCD
Trigger: GTCACACCATCCTGGTGTTCACCCGGAAGGAAGACC...CTGGGTCACACCATCCTGGTGTTCACCCGGAAGGAAGACCTGGCTGGCGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR TCA 90 bp CGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCACCCGGGGCCACAGGTCGGCTGTaGGCATCTGTGTCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: RSTPQEHLGPQRRWGAPGATGRL*ASVSSC
Trigger: ACAGCTAGACACAGATGCTCACAGCCGACCTGTGGC...CCCGGGTGCACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CAGGGAGCCGCCAGCCAGGTCTTCCTTCCGGGTGAACACCAGGATGGTGTGACCTTGGCAGATAGCGTCTaGCACCTCTGGCGAGACCTC +
Preference number: 4 (lower is better)
Translates to: QGAASQVFLPGEHQDGVTLADSV*HLWRDL
Trigger: GAGGTCTCGCCAGAGGTGGCAGACGCTATCTGCCAA...GGTCACACCATCCTGGTGTTCACCCGGAAGGAAGACCTGGCTGGCGGCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGACCAGGAGCACGGCGTaGGGCCCTGGGGCGGATAAG +
Preference number: 4 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVTRSTA*GPGADK
Trigger: CTTATCCGCCCCAGGGCCCCACGCCGTGCTCCTGGT...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGTTGAAGCCGCAATGGCGAGCCAGGCAAGGGCCTaGTTGTTGGTCTCTCGCACA +
Preference number: 4 (lower is better)
Translates to: QLGLLLLPLCPVVEAAMASQARA*LLVSRT
Trigger: TGTGCGAGAGACCAACAACCAGGCCCTTGCCTGGCT...CGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp GGAGCCGCCAGCCAGGTCTTCCTTCCGGGTGAACACCAGGATGGTGTGACCCAGTTGTTGAAGCCGCAATaGCGCCGTGCAAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: GAASQVFLPGEHQDGVTQLLKPQ*RRARVT
Trigger: TGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAA...CTGGGTCACACCATCCTGGTGTTCACCCGGAAGGAAGACCTGGCTGGCGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp TTTCTCCATGAGCTCTCGCAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTAGCGTCTGCCACCTCTaGCGAGACCTCCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: FLHELSQLGLLLLPLCPVSVCHL*RDLLTA
Trigger: AGCTGTCAGGAGGTCTCGCCAGAGGTGGCAGACGCT...AACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATGGAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR TCA 90 bp GGTCCAATAGGAAGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATCTGGAGACCTGCCCTTaGAAGAGCAGTGTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GPIGRQRAVGAQRREDPDLETCP*KSSVRW
Trigger: CCAGCGGACACTGCTCTTTCAAGGGCAGGTCTCCAG...ATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCCTCCTGCAGGCGCCTaGCCACCTGCTGATCCTCAT +
Preference number: 4 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVPPAGA*PPADPH
Trigger: ATGAGGATCAGCAGGTGGTCAGGCGCCTGCAGGAGG...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp GGTCCAATAGGAAGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATACTCCAAAGACCTCCTaGAGGCGCCTGACCACCTGC +
Preference number: 4 (lower is better)
Translates to: GPIGRQRAVGAQRREDPDTPKTS*RRLTTC
Trigger: GCAGGTGGTCAGGCGCCTGCAGGAGGTCTTTGGAGT...ATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAAGCCGCAATGGCGCCGTaGAAGGGTCACATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RQRAVGAQRREDPDVLEEAAMAP*KGHIQP
Trigger: TGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGC...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAAACTCCAAAGACCTCCTaGAGGCGCCTGACCACCTGC +
Preference number: 4 (lower is better)
Translates to: RQRAVGAQRREDPDVLEETPKTS*RRLTTC
Trigger: GCAGGTGGTCAGGCGCCTGCAGGAGGTCTTTGGAGT...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGCGCAGTTGGGCCTCCTaGTCCTCCCCCTGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLRSWAS*SSPCAL
Trigger: CAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCG...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCACCCGGGTCTTCCCTGCCTCCTTaGATTGGACCCCCACAAATA +
Preference number: 4 (lower is better)
Translates to: RSTPQEHLGPQRRWGAPGSSLPP*IGPPQI
Trigger: TATTTGTGGGGGTCCAATGCAAGGAGGCAGGGAAGA...CCCGGGTGCACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGTCAAAGGAGGTGGGGTaGACCCGGGGCACATCAGTC +
Preference number: 4 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVSKEVG*TRGTSV
Trigger: GACTGATGTGCCCCGGGTGCACCCCACCTCCTTTGA...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCAGGAGCACGGCGTaGGGCCCTGGGGCGGATAAG +
Preference number: 4 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADTRSTA*GPGADK
Trigger: CTTATCCGCCCCAGGGCCCCACGCCGTGCTCCTGGT...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp GAAGCCGCAATGGCGCCGTGCAAGGGTCACATCCAGCCAGGCAAGGGCCTGGTTCAAGGGCCTGGTTGTTaGTCTCTCGCACATAGTCTT +
Preference number: 4 (lower is better)
Translates to: EAAMAPCKGHIQPGKGLVQGPGC*SLAHSL
Trigger: AAGACTATGTGCGAGAGACCAACAACCAGGCCCTTG...AACCAGGCCCTTGCCTGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp CAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGTTGAAGCCGCAATGGCGTCCTCAGATTCCTTCTaGATCTGGGACAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: QLGLLLLPLCPVVEAAMASSDSF*IWDSPS
Trigger: GGAAGGACTGTCCCAGATCCAGAAGGAATCTGAGGA...CGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAAGTGATCTGGGCATGCTaGACCCTGTCCTCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: RQRAVGAQRREDPDVLEEVIWAC*TLSSSP
Trigger: GGGGCTTGAGGACAGGGTCCAGCATGCCCAGATCAC...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCAGGACCTCAAAGGAGGTaGGGTGCACCCGGGGCACAT +
Preference number: 4 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPGPQRR*GAPGAH
Trigger: ATGTGCCCCGGGTGCACCCCACCTCCTTTGAGGTCC...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGCGCCTGACCACCTGCTaGTCCTCATCCGTGAACCGG +
Preference number: 4 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRRLTTC*SSSVNR
Trigger: CCGGTTCACGGATGAGGATCAGCAGGTGGTCAGGCG...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCACCCGGGTTTAAGTCACTCTACTaGTTCCTTTGCAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RSTPQEHLGPQRRWGAPGFKSLY*FLCRPP
Trigger: AGGGGGCCTGCAAAGGAAGCAGTAGAGTGACTTAAA...CCCGGGTGCACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCATCTCGGCTCCGTCTCTaGGAGGTCTTGGTCACGGGT +
Preference number: 4 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPSRLRL*EVLVTG
Trigger: ACCCGTGACCAAGACCTCCCAGAGACGGAGCCGAGA...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp GGTCCAATAGGAAGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATACGTCCTCAGAGCCTTaGCCCTGGCTTACTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GPIGRQRAVGAQRREDPDTSSEP*PWLTCL
Trigger: AAGGCAAGTAAGCCAGGGCCAAGGCTCTGAGGACGT...ATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp GGTCCAATAGGAAGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATCCAGACGTCATGACCTaGAGACTGGGAAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: GPIGRQRAVGAQRREDPDPDVMT*RLGSTP
Trigger: TGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGG...ATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAAAAGACAGCGTGCTGTTaGGGCACAGAGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RQRAVGAQRREDPDVLEEKTACC*GTEEGG
Trigger: TCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTT...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp GGTCCAATAGGAAGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATTCAGTCTCCTCTTGCTaGCAGGCAGCTTCCTATCCG +
Preference number: 4 (lower is better)
Translates to: GPIGRQRAVGAQRREDPDSVSSC*QAASYP
Trigger: CGGATAGGAAGCTGCCTGCCAGCAAGAGGAGACTGA...ATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAACTGGAGACCTGCCCTTaGAAGAGCAGTGTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQLETCP*KSSVRW
Trigger: CCAGCGGACACTGCTCTTTCAAGGGCAGGTCTCCAG...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp CATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATGTTTACCTGTGCCCTGTTGTTaGAGCCGCAATGGCGCCGTG +
Preference number: 4 (lower is better)
Translates to: HGLQSSPINQAGCLARCLPVPCC*SRNGAV
Trigger: CACGGCGCCATTGCGGCTTCAACAACAGGGCACAGG...TAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp GGTCCAATAGGAAGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATTTGCCGCACCAAACGTaGCTGCATGACTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: GPIGRQRAVGAQRREDPDLPHQT*LHDSNA
Trigger: TGCATTGGAGTCATGCAGTCACGTTTGGTGCGGCAA...ATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTGCATGACTCTTGGTGGGGTGGTGTaGCCTCCTCTGCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SSGQQLAWSCRTKRDCMTLGGVV*PPLPKS
Trigger: GGACTTGGGCAGAGGAGGTCACACCACCCCACCAAG...AGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGGACCAACATCTGCCCTaGAACCAGCGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRDQHLP*NQRWAT
Trigger: GGTGGCCCAGCGCTGGTTTCAGGGCAGATGTTGGTC...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR GCA 90 bp GGATCTGGGACAGTCCTTCCAGCCAAGACTCCTCACCAGGCACGTCCTCAGAGCTTCTTCCTCCATCTCTaGACCAGCTCACAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GSGTVLPAKTPHQARPQSFFLHL*TSSQAR
Trigger: TCTTGCCTGTGAGCTGGTGCAGAGATGGAGGAAGAA...GCTCTGAGGACGTGCCTGGTGAGGAGTCTTGGCTGGAAGGACTGTCCCAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR GCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCATTGGCAGATAGCGTCTaGCACCTCTGGCGAGACCTG +
Preference number: 4 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPLADSV*HLWRDL
Trigger: CAGGTCTCGCCAGAGGTGGCAGACGCTATCTGCCAA...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGGCCGCAATGGCGCCGTaGAAGGGTCACATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRAAMAP*KGHIQP
Trigger: TGGCTGGATGTGACCCTTGCACGGCGCCATTGCGGC...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp GGCAAGGGCCTGGTTGTTGGTCTCTCGCACATAGTCTTCCAGGGAGCCGCCAGCTGGCCCTGGCTTACTTaGCTTTCCTGTAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GKGLVVGLSHIVFQGAASWPWLT*LSCSSF
Trigger: GAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCA...GCTGGCGGCTCCCTGGAAGACTATGTGCGAGAGACCAACAACCAGGCCCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR GCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCAGCTAGGGAACCCGTTTaGACACGCAGACACCCCATC +
Preference number: 4 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPAREPV*TRRHPI
Trigger: GATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGC...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACATGAGCTCTCGCAGTTaGGCCTCCTGCTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADMSSRS*ASCSSP
Trigger: GGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCAT...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGACGTCCTCAGAGCCTTaGCCCTGGCTTACTTGCCTT +
Preference number: 4 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVTSSEP*PWLTCL
Trigger: AAGGCAAGTAAGCCAGGGCCAAGGCTCTGAGGACGT...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCCCAGCAGGCATCTGTaGGCTTCCTCAGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVPSRHL*ASSDSF
Trigger: GAAGGAATCTGAGGAAGCCCACAGATGCCTGCTGGG...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGGGACCTCAAAGGAGGTaGGGTGCACCCGGGGCACAT +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRGPQRR*GAPGAH
Trigger: ATGTGCCCCGGGTGCACCCCACCTCCTTTGAGGTCC...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp GGTCCAATAGGAAGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATAAGGGACCACCTACTTaGCCACAGTCTGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: GPIGRQRAVGAQRREDPDKGPPT*PQSDFL
Trigger: CAAGAAGTCAGACTGTGGTCAAGTAGGTGGTCCCTT...ATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGAGGCCTGAGACAGGATaGCATCCTACTCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVRPETG*HPTPFS
Trigger: TGAGAAGGGAGTAGGATGTCATCCTGTCTCAGGCCT...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAAGAGCACCGGCCTTCCTaGGTCAGAAGAGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQEHRPS*VRRVCC
Trigger: ACAGCAGACTCTTCTGACTCAGGAAGGCCGGTGCTC...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR GCA 90 bp ACCAGACGTCATGACCTGGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAAAAGGGCTGCTCCTCCTaGCTCCATCCCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TRRHDLETGKHSMGWKEKKGCSS*LHPCSC
Trigger: GCAGGAACAGGGATGGAGGCAGGAGGAGCAGCCCTT...TTTCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAAGCTAGGGAACCCGTTTaGACACGCAGACACCCCATC +
Preference number: 4 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQAREPV*TRRHPI
Trigger: GATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGC...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATGTTTAGCCCCCTTTCTTCCCTaGCTCCTTGCATTGGACCCC +
Preference number: 4 (lower is better)
Translates to: HGLQSSPINQAGCLARCLAPFLP*LLALDP
Trigger: GGGGTCCAATGCAAGGAGGCAGGGAAGAAAGGGGGC...TAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGAAAGGACCACGTTTCTaGTCTCCCGGCCACGCACTC +
Preference number: 4 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRKGPRF*SPGHAL
Trigger: GAGTGCGTGGCCGGGAGACCAGAAACGTGGTCCTTT...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGGATAAGACGATGGCTTaGCAGATAGCGTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVDKTMA*QIASAT
Trigger: GGTGGCAGACGCTATCTGCCAAGCCATCGTCTTATC...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp GAGCCTTGGCCCTGGCTTACTTGCCTTTCCTGTAGTTCTTTCAGCCGAAAGTTTATGAGCTCTCGCAGTTaGGCCTCCTGCTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: EPWPWLTCLSCSSFSRKFMSSRS*ASCSSP
Trigger: GGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCAT...AAACTTTCGGCTGAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp ACCAGACGTCATGACCTGGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAAGTGATCTGGGCATGCTaGACCCTGTCCTCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: TRRHDLETGKHSMGWKEKVIWAC*TLSSSP
Trigger: GGGGCTTGAGGACAGGGTCCAGCATGCCCAGATCAC...TTTCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAAGGTCAACAGCTTGCATaGAGTTGCCGCACCAAACGT +
Preference number: 4 (lower is better)
Translates to: RQRAVGAQRREDPDVLEEGQQLA*SCRTKR
Trigger: ACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACC...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp GGTCCAATAGGAAGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATCCTGCCTCCTTGCATTaGACCCCCACAAATACTTTG +
Preference number: 4 (lower is better)
Translates to: GPIGRQRAVGAQRREDPDPASLH*TPTNTL
Trigger: CAAAGTATTTGTGGGGGTCCAATGCAAGGAGGCAGG...ATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATTGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCAAGGGAAGATGGGGGATaGCTTCAGAGCAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPREDGG*LQSKRP
Trigger: TGGCCTCTTGCTCTGAAGCCATCCCCCATCTTCCCT...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CAA 72 bp TTCCCTGCCTCCTTGCATTGGACCCCCACAAATACTTaGCTAGGGAACCCGTTTGCACACGCAGACACCCCA +
Preference number: 4 (lower is better)
Translates to: FPASLHWTPTNT*LGNPFAHADTP
Trigger: TGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAAGGAGGCAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCATTGCCGCACCAAACGTaGCTGCATGACTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPLPHQT*LHDSNA
Trigger: TGCATTGGAGTCATGCAGTCACGTTTGGTGCGGCAA...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGAAGAGCAGAGCCTCCTaGCAGCTCCAGCACAGGATC +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRKSRAS*QLQHRI
Trigger: GATCCTGTGCTGGAGCTGTCAGGAGGCTCTGCTCTT...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR GCA 90 bp TCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTGCATGACTTTGGCAGATAGCGTCTaGCACCTCTGGCGAGACCTG +
Preference number: 4 (lower is better)
Translates to: SSGQQLAWSCRTKRDCMTLADSV*HLWRDL
Trigger: CAGGTCTCGCCAGAGGTGGCAGACGCTATCTGCCAA...AGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGCTGCTCCTCCCCCTGTaGCCTGTTGTTGAAGCCGCA +
Preference number: 4 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKLLLPL*PVVEAA
Trigger: TGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAG...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCAAAGAGCAGTGTCCGCTaGAGATGGAGGAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPKSSVR*RWRNRK
Trigger: CTTCCTGTTCCTCCATCTCCAGCGGACACTGCTCTT...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp ATGGCGCCGTGCAAGGGTCACATCCAGCCAGGCAAGGGCCTGGTTGTTGGTCTCTCTGGGGGATTCTCCTaGGGAATTTGTTCATATTCT +
Preference number: 4 (lower is better)
Translates to: MAPCKGHIQPGKGLVVGLSGGFS*GICSYS
Trigger: AGAATATGAACAAATTCCCCAGGAGAATCCCCCAGA...GAGACCAACAACCAGGCCCTTGCCTGGCTGGATGTGACCCTTGCACGGCGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp ACCAGACGTCATGACCTGGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAAAGCCAGGCAAGGGCCTaGTTGTTGGTCTCTCGCACA +
Preference number: 4 (lower is better)
Translates to: TRRHDLETGKHSMGWKEKSQARA*LLVSRT
Trigger: TGTGCGAGAGACCAACAACCAGGCCCTTGCCTGGCT...TTTCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACAGCCAGGCAAGGGCCTaGTTGTTGGTCTCTCGCACA +
Preference number: 4 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADSQARA*LLVSRT
Trigger: TGTGCGAGAGACCAACAACCAGGCCCTTGCCTGGCT...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAATTGTTGAAGCCGCAATaGCGCCGTGCAAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQLLKPQ*RRARVT
Trigger: TGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAA...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAATGAGCTCTCGCAGTTaGGCCTCCTGCTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGMSSRS*ASCSSP
Trigger: GGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCAT...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCATCAGAGCCTTGGCCCTaGCTTACTTGCCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPSEPWP*LTCLSC
Trigger: ACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCTCTGA...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATCTACCTTGGTGGGGTaGTGTGACCTCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KHHGLQSSPINQAGCLARSTLVG*CDLLCP
Trigger: TGGGCAGAGGAGGTCACACCACCCCACCAAGGTAGA...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACTCCCCAGGAGCATCTTaGACCTCAAAGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADSPGAS*TSKEVG
Trigger: CCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGA...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGTCCCCAGGAGCATCTTaGACCTCAAAGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRSPGAS*TSKEVG
Trigger: CCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGA...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAAGAGCATCTCCAACAGTaGATGAGTGTCCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: RQRAVGAQRREDPDVLEEEHLQQ*MSVQVD
Trigger: GTCTACCTGGACACTCATCCACTGTTGGAGATGCTC...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGGCTGGGCCACCATTCTaGGCCCACATCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLAGPPF*AHILEG
Trigger: ACCTTCAAGGATGTGGGCCCAGAATGGTGGCCCAGC...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR TCA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGTCTTCCTTCCGGGTaGACACCAGGATGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLGLPSG*TPGWCD
Trigger: GTCACACCATCCTGGTGTTCACCCGGAAGGAAGACC...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCATACTTGACCACAGTCTaGCTTCTTGGATACCCTGCC +
Preference number: 4 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPYLTTV*LLGYPA
Trigger: GGCAGGGTATCCAAGAAGTCAGACTGTGGTCAAGTA...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGTTCCTATCCGAGGCCTaGGACAGGATGACATCCTAC +
Preference number: 4 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRFLSEA*DRMTSY
Trigger: GTAGGATGTCATCCTGTCTCAGGCCTCGGATAGGAA...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAATCTGTGTCTAGCTGTTaGGCATCTCCAACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: RQRAVGAQRREDPDVLEESVSSC*ASPTVD
Trigger: ATCCACTGTTGGAGATGCTCAACAGCTAGACACAGA...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAAAGGAGTGACTTTCCCTaGTCTCTCTTTTCTGAACCC +
Preference number: 4 (lower is better)
Translates to: RQRAVGAQRREDPDVLEERSDFP*SLFSEP
Trigger: GGGTTCAGAAAAGAGAGATCAGGGAAAGTCACTCCT...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR GCA 90 bp TCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTGCATGACTACTCGAAGACGTCCCTaGCGAGGATGCTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SSGQQLAWSCRTKRDCMTTRRRP*RGCCFL
Trigger: CAGGAAACAGCATCCTCGGCAGGGACGTCTTCGAGT...AGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGTGGCCCTGGCTTACTTaGCTTTCCTGTAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVWPWLT*LSCSSF
Trigger: GAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCA...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTGCATGACTTGTCCTCAAGCCCCATaGCCCTCTTCCTACACCAGA +
Preference number: 4 (lower is better)
Translates to: SSGQQLAWSCRTKRDCMTCPQAP*PSSYTR
Trigger: TCTGGTGTAGGAAGAGGGGCATGGGGCTTGAGGACA...AGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAAAATAGGAAGACAGCGTaGTGTTGGGGCACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQNRKTA*CWGTEE
Trigger: CTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATT...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGCAGCTTGCATGGAGTTaGCGCACCAAACGTGACTGC +
Preference number: 4 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLQLAWS*RTKRDC
Trigger: GCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTG...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGACTTCTTGGATACCCTaGCCCAAACTTCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVTSWIP*PKLLPS
Trigger: TGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGT...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCCAAGTCCACTTaGATCCCTAGGGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRLPKST*IPRGFH
Trigger: ATGGAAGCCCCTAGGGATGCAAGTGGACTTGGGCAG...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAAGTTGAAAGTAGTCTGTaGCTTCTAGGAGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RQRAVGAQRREDPDVLEEVESSL*LLGAEG
Trigger: GCCTTCTGCTCCTAGAAGGCACAGACTACTTTCAAC...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGCTCTACTGCTTCCTTTaGAGGCCCCCTTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRLYCFL*RPPFFP
Trigger: AGGGAAGAAAGGGGGCCTGCAAAGGAAGCAGTAGAG...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACCTGGGACAGCTCTTCTaGGGGATTCTCCTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADLGQLF*GILLGN
Trigger: ATTCCCCAGGAGAATCCCCCAGAAGAGCTGTCCCAG...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TCCTCAGAGCCTTGGCCCTGGCTTACTTGCCTTTCCTGTAGTTCTTTCAGCCGAGATAAGACGATGGCTTaGCAGATAGCGTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SSEPWPWLTCLSCSSFSRDKTMA*QIASAT
Trigger: GGTGGCAGACGCTATCTGCCAAGCCATCGTCTTATC...TCGGCTGAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCTCTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCCCAGCAGGCATCTGTaGGCTTCCTCAGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRPSRHL*ASSDSF
Trigger: GAAGGAATCTGAGGAAGCCCACAGATGCCTGCTGGG...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGTCAGTCTCCTCTTGCTaGCAGGCAGCTTCCTATCCG +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRSVSSC*QAASYP
Trigger: CGGATAGGAAGCTGCCTGCCAGCAAGAGGAGACTGA...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGATCACCAGGAGCCTCTaGGTGTACCCCCAGACTGCA +
Preference number: 4 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKITRSL*VYPQTA
Trigger: TGCAGTCTGGGGGTACACCCAGAGGCTCCTGGTGAT...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR TCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAGCTGATCCTCATCCGTaGACCGGCCCAGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGADPHP*TGPVVS
Trigger: TGACACAACTGGGCCGGTTCACGGATGAGGATCAGC...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATCGCCTGACCACCTGCTaGTCCTCATCCGTGAACCGG +
Preference number: 4 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYRLTTC*SSSVNR
Trigger: CCGGTTCACGGATGAGGATCAGCAGGTGGTCAGGCG...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCACCAAACGTGACTGCATaGCTCCAATGCAGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPPNVTA*LQCSQK
Trigger: CTTTTGACTGCATTGGAGTCATGCAGTCACGTTTGG...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGTATCATGAGGGGCCATaGAACCCATGGAAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRYHEGP*NPWKKG
Trigger: CCCCTTTTTCCATGGGTTTCATGGCCCCTCATGATA...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGGATGCTGTTTCCTGTTaGACTCTTCCCACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRDAVSC*TLPTPC
Trigger: ACAGGGAGTGGGAAGAGTGCAACAGGAAACAGCATC...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTACTCGAAGACGTCCCTaGCGAGGATGCTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLTRRRP*RGCCFL
Trigger: CAGGAAACAGCATCCTCGGCAGGGACGTCTTCGAGT...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CAGGATGGTGTGACCCAGAACCCCCACTCCAAAGACCTCCTGCAGGCGCCTGACATTGGTAAGCCTTGTTaGTGTAATAATCTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: QDGVTQNPHSKDLLQAPDIGKPC*CNNLLR
Trigger: ACGAAGGAGATTATTACAGCAACAAGGCTTACCAAT...GTCAGGCGCCTGCAGGAGGTCTTTGGAGTGGGGGTTCTGGGTCACACCATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR GCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGATCTGGTCAACAGCTTaGATGGAGTTGCCGCACCAA +
Preference number: 4 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRIWSTA*MELPHQ
Trigger: TTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGAT...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp ACCAGACGTCATGACCTGGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAAATGTCTCAGCACCACTaGCATGTTCCAGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: TRRHDLETGKHSMGWKEKMSQHH*HVPATR
Trigger: TCTGGTGGCTGGAACATGGCAGTGGTGCTGAGACAT...TTTCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGAATGTCTCAGCACCACTaGCATGTTCCAGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: KHHGLQSSPINQAGCLARMSQHH*HVPATR
Trigger: TCTGGTGGCTGGAACATGGCAGTGGTGCTGAGACAT...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGGACACCCCATCCACATaGTCCCATTATCAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRDTPST*SHYQGR
Trigger: TCTCCCTTGATAATGGGAGCATGTGGATGGGGTGTC...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp ACCAGACGTCATGACCTGGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAACTCTACTGCTTCCTTTaGAGGCCCCCTTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TRRHDLETGKHSMGWKEKLYCFL*RPPFFP
Trigger: AGGGAAGAAAGGGGGCCTGCAAAGGAAGCAGTAGAG...TTTCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGTCTGCTGTTGCACTTTaGAGCCTCGGAAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVSAVAL*SLGSRK
Trigger: TTTTCTACTTCCGAGGCTGCAAAGTGCAACAGCAGA...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR CCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGAAGAGCAGTGTCCGCTaGAGATGGAGGAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRKSSVR*RWRNRK
Trigger: CTTCCTGTTCCTCCATCTCCAGCGGACACTGCTCTT...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATGTTTATTCAGAGAGCTGGGCTaGAGACCTGCCCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: HGLQSSPINQAGCLARCLFRELG*RPALER
Trigger: TCTTTCAAGGGCAGGTCTCCAGCCCAGCTCTCTGAA...TAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp ACCAGACGTCATGACCTGGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAAATGTTTTCAGAGAGCTaGGCTGGAGACCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: TRRHDLETGKHSMGWKEKMFSES*AGDLPL
Trigger: CAAGGGCAGGTCTCCAGCCCAGCTCTCTGAAAACAT...TTTCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAATCCTCAGATTCCTTCTaGATCTGGGACAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQSSDSF*IWDSPS
Trigger: GGAAGGACTGTCCCAGATCCAGAAGGAATCTGAGGA...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTCCAGACGTCATGACCTaGAGACTGGGAAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLPDVMT*RLGSTP
Trigger: TGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGG...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGAATCTAAGTCTACCTTaGTGGGGTGGTGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRNLSLP*WGGVTS
Trigger: GGAGGTCACACCACCCCACCAAGGTAGACTTAGATT...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGTTCTGGAAGAAGGAATaGAGGAACTGGAATGTGATC +
Preference number: 4 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVFWKKE*RNWNVI
Trigger: GATCACATTCCAGTTCCTTCATTCCTTCTTCCAGAA...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp CATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATGTTTATGGTGTGGGGAGAGATaGGAAGTCATCTGGTCAACA +
Preference number: 4 (lower is better)
Translates to: HGLQSSPINQAGCLARCLWCGER*EVIWST
Trigger: TGTTGACCAGATGACTTCTCATCTCTCCCCACACCA...TAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAAGTTACAGCTCAAGAGTaGATAAAAGGGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQVTAQE*IKGLLL
Trigger: GAGGAGCAGCCCTTTTATTCACTCTTGAGCTGTAAC...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGTACTTGACCACAGTCTaGCTTCTTGGATACCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLYLTTV*LLGYPA
Trigger: GGCAGGGTATCCAAGAAGTCAGACTGTGGTCAAGTA...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGAAGGGACCACCTACTTaGCCACAGTCTGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRKGPPT*PQSDFL
Trigger: CAAGAAGTCAGACTGTGGTCAAGTAGGTGGTCCCTT...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTGCATGACTTATCATGAGGGGCCATaGAACCCATGGAAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: SSGQQLAWSCRTKRDCMTYHEGP*NPWKKG
Trigger: CCCCTTTTTCCATGGGTTTCATGGCCCCTCATGATA...AGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGAGAAGGCAAATATCATaGGGGGCCATGAAACCCATG +
Preference number: 4 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRRRQIS*GAMKPM
Trigger: CATGGGTTTCATGGCCCCTCATGATATTTGCCTTCT...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp GTTTTGCTGGGTATATTGGTAAGCCTTGTTGCTGTAATAATCTCCTTCGTTTTCCGCAGTTGGGCCTCCTaGTCCTCCCCCTGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: VLLGILVSLVAVIISFVFRSWAS*SSPCAL
Trigger: CAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCG...GAAAACGAAGGAGATTATTACAGCAACAAGGCTTACCAATATACCCAGCAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR GCA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACCGCACCAAACGTGACTaGATGACTCCAATGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADRTKRD*MTPMQS
Trigger: TGACTGCATTGGAGTCATGCAGTCACGTTTGGTGCG...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGGACACCCCATCCACATaGTCCCATTATCAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRDTPST*SHYQGR
Trigger: TCTCCCTTGATAATGGGAGCATGTGGATGGGGTGTC...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATGCCCCCTTTCTTCCCTaGCTCCTTGCATTGGACCCC +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHAPFLP*LLALDP
Trigger: GGGGTCCAATGCAAGGAGGCAGGGAAGAAAGGGGGC...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCAATAAACCAGGCAGGCTaGCTCGCAAGATGTTTAAGT +
Preference number: 4 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPINQAG*LARCLS
Trigger: ACTTAAACATCTTGCGAGGCAGCCTGCCTGGTTTAT...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGTCTGGGGGATTCTCCTaGGGAATTTGTTCATATTCT +
Preference number: 4 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVSGGFS*GICSYS
Trigger: AGAATATGAACAAATTCCCCAGGAGAATCCCCCAGA...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGAGAGCCTCAGTCTCCTTaGGGTCTTCTGTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KHHGLQSSPINQAGCLAREPQSP*GLLFFL
Trigger: GAGAAAGAACAGAAGACCCCAAGGAGACTGAGGCTC...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGGATAAGACGATGGCTTaGCAGATAGCGTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKDKTMA*QIASAT
Trigger: GGTGGCAGACGCTATCTGCCAAGCCATCGTCTTATC...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGACAAGGGCCTGGTTGTTaGTCTCTCGCACATAGTCTT +
Preference number: 4 (lower is better)
Translates to: KHHGLQSSPINQAGCLARQGPGC*SLAHSL
Trigger: AAGACTATGTGCGAGAGACCAACAACCAGGCCCTTG...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp GAGCCTTGGCCCTGGCTTACTTGCCTTTCCTGTAGTTCTTTCAGCCGAAAGTTTTCAGAGCCTTGGCCCTaGCTTACTTGCCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: EPWPWLTCLSCSSFSRKFSEPWP*LTCLSC
Trigger: ACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCTCTGA...AAACTTTCGGCTGAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp AGCCTTGGCCCTGGCTTACTTGCCTTTCCTGTAGTTCTTTCAGCCGAAAGTTTTACGTCCTCAGAGCCTTaGCCCTGGCTTACTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SLGPGLLAFPVVLSAESFTSSEP*PWLTCL
Trigger: AAGGCAAGTAAGCCAGGGCCAAGGCTCTGAGGACGT...AAAACTTTCGGCTGAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACTCCTCAGATTCCTTCTaGATCTGGGACAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADSSDSF*IWDSPS
Trigger: GGAAGGACTGTCCCAGATCCAGAAGGAATCTGAGGA...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AGCCTTGGCCCTGGCTTACTTGCCTTTCCTGTAGTTCTTTCAGCCGAAAGTTTTCCCAGCAGGCATCTGTaGGCTTCCTCAGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLGPGLLAFPVVLSAESFPSRHL*ASSDSF
Trigger: GAAGGAATCTGAGGAAGCCCACAGATGCCTGCTGGG...AAAACTTTCGGCTGAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGCTAAGTCTACCTTGGTaGGGTGGTGTGACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKLSLPW*GGVTSS
Trigger: AGAGGAGGTCACACCACCCCACCAAGGTAGACTTAG...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGCCTGCCTCCTTGCATTaGACCCCCACAAATACTTTG +
Preference number: 4 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLPASLH*TPTNTL
Trigger: CAAAGTATTTGTGGGGGTCCAATGCAAGGAGGCAGG...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATGGTCTTCCTTCCGGGTaGACACCAGGATGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYGLPSG*TPGWCD
Trigger: GTCACACCATCCTGGTGTTCACCCGGAAGGAAGACC...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTGCATGACTCCCTGCTACGCAGCTTaGAGAAAGGAAAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SSGQQLAWSCRTKRDCMTPCYAA*RKEKRN
Trigger: ATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGG...AGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGTCTGTGTCTAGCTGTTaGGCATCTCCAACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLSVSSC*ASPTVD
Trigger: ATCCACTGTTGGAGATGCTCAACAGCTAGACACAGA...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATGCCACAGGTCGGCTGTaGGCATCTGTGTCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYATGRL*ASVSSC
Trigger: ACAGCTAGACACAGATGCTCACAGCCGACCTGTGGC...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAACGCTTATTTAATAAGTaGTTGTGGCACAAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RQRAVGAQRREDPDVLEERLFNK*LWHKGC
Trigger: ACAGCCTTTGTGCCACAATCACTTATTAAATAAGCG...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAATTGCCAGTTAGTCGCTaGATGGATCTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQLPVSR*MDLIWS
Trigger: TGACCAAATGAGATCCATTCAGCGACTAACTGGCAA...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TTTCTCCATGAGCTCTCGCAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGACAAGGCCGATGTTTaGTTATATTTTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: FLHELSQLGLLLLPLCPVDKADV*LYFQQN
Trigger: ATTTTGCTGAAAATATAAGCAAACATCGGCCTTGTC...AACAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATGGAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR GCA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTTTCTTCCTCCATCTCTaGACCAGCTCACAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLFFLHL*TSSQAR
Trigger: TCTTGCCTGTGAGCTGGTGCAGAGATGGAGGAAGAA...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGTGGCCCTGGCTTACTTaGCTTTCCTGTAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRWPWLT*LSCSSF
Trigger: GAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCA...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGAACTTCTTGGATACCCTaGCCCAAACTTCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: KHHGLQSSPINQAGCLARTSWIP*PKLLPS
Trigger: TGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGT...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGATTCAGAGAGCTGGGCTaGAGACCTGCCCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGFRELG*RPALER
Trigger: TCTTTCAAGGGCAGGTCTCCAGCCCAGCTCTCTGAA...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCATCTGGGGGATTCTCCTaGGGAATTTGTTCATATTCT +
Preference number: 4 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPSGGFS*GICSYS
Trigger: AGAATATGAACAAATTCCCCAGGAGAATCCCCCAGA...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATACCTCTGGCGAGACCTaGGGGGACAGAATGTTGGGT +
Preference number: 4 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYTSGET*GDRMLG
Trigger: ACCCAACATTCTGTCCCCCCAGGTCTCGCCAGAGGT...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATACCTCTGGCGAGACCTaGGGGGACAGAATGTTGGGT +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHTSGET*GDRMLG
Trigger: ACCCAACATTCTGTCCCCCCAGGTCTCGCCAGAGGT...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTCAAGGGCCTGGTTGTTaGTCTCTCGCACATAGTCTT +
Preference number: 4 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLQGPGC*SLAHSL
Trigger: AAGACTATGTGCGAGAGACCAACAACCAGGCCCTTG...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACCACAGTCTGACTTCTTaGATACCCTGCCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADHSLTS*IPCPKL
Trigger: AAGTTTGGGGCAGGGTATCCAAGAAGTCAGACTGTG...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCACAGTCTGACTTCTTaGATACCCTGCCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRHSLTS*IPCPKL
Trigger: AAGTTTGGGGCAGGGTATCCAAGAAGTCAGACTGTG...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAATCCAGGAAAACATCATaGGCTTCAGAGTTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQSRKTS*ASEFSH
Trigger: ATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGA...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGGTTACAGCTCAAGAGTaGATAAAAGGGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKVTAQE*IKGLLL
Trigger: GAGGAGCAGCCCTTTTATTCACTCTTGAGCTGTAAC...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGAGAAGGCAAATATCATaGGGGGCCATGAAACCCATG +
Preference number: 4 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKRRQIS*GAMKPM
Trigger: CATGGGTTTCATGGCCCCTCATGATATTTGCCTTCT...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACCTCTGTGCTCTGCTTTaGGACACTTTTCTGAATCTG +
Preference number: 4 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADLCALL*DTFLNL
Trigger: CAGATTCAGAAAAGTGTCTCAAAGCAGAGCACAGAG...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGATGAATGACATGTTTTaGGTGCCTTGCCAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRMNDMF*VPCQLV
Trigger: GACTAACTGGCAAGGCACTCAAAACATGTCATTCAT...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAAATGAATGACATGTTTTaGGTGCCTTGCCAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQMNDMF*VPCQLV
Trigger: GACTAACTGGCAAGGCACTCAAAACATGTCATTCAT...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTCGCAGTTGGGCCTCCTaGTCCTCCCCCTGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALIRSWAS*SSPCAL
Trigger: CAGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCG...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATTGTCCTCAAGCCCCATaGCCCTCTTCCTACACCAGA +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHCPQAP*PSSYTR
Trigger: TCTGGTGTAGGAAGAGGGGCATGGGGCTTGAGGACA...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAATCTGGTCAACAGCTTaGATGGAGTTGCCGCACCAA +
Preference number: 4 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGIWSTA*MELPHQ
Trigger: TTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGAT...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATTGGTGTGACCTCCTCTaGCCAAGTCCACTTGCATCC +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHWCDLL*PSPLAS
Trigger: GGATGCAAGTGGACTTGGGCAGAGGAGGTCACACCA...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGGTAGACCTGAGGCTGTaGCCTGAGATTTCTGATCAT +
Preference number: 4 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKVDLRL*PEISDH
Trigger: ATGATCAGAAATCTCAGGGCACAGCCTCAGGTCTAC...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAAGAAGAGTCTGCTGTTaGACTTTGCAGCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGRRVCC*TLQPRK
Trigger: CTTCCGAGGCTGCAAAGTGCAACAGCAGACTCTTCT...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR CCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATCTGGGACAGCTCTTCTaGGGGATTCTCCTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYLGQLF*GILLGN
Trigger: ATTCCCCAGGAGAATCCCCCAGAAGAGCTGTCCCAG...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATTTGTTGAAGCCGCAATaGCGCCGTGCAAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYLLKPQ*RRARVT
Trigger: TGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAA...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAAATCTAAGTCTACCTTaGTGGGGTGGTGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGNLSLP*WGGVTS
Trigger: GGAGGTCACACCACCCCACCAAGGTAGACTTAGATT...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTGCATGACTTCCAGGAAAACATCATaGGCTTCAGAGTTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SSGQQLAWSCRTKRDCMTSRKTS*ASEFSH
Trigger: ATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGA...AGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp GGTCCAATAGGAAGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGCATGTTCAGTTCAATaGGAAATTGATCGCTTATTT +
Preference number: 4 (lower is better)
Translates to: GPIGRQRAVGAQRREDPDACSVQ*EIDRLF
Trigger: AAATAAGCGATCAATTTCCCATTGAACTGAACATGC...ATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATTGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAAGACAAGGCCGATGTTTaGTTATATTTTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: RQRAVGAQRREDPDVLEEDKADV*LYFQQN
Trigger: ATTTTGCTGAAAATATAAGCAAACATCGGCCTTGTC...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATAATAGGAAGACAGCGTaGTGTTGGGGCACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYNRKTA*CWGTEE
Trigger: CTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATT...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTATAAACCAGGCAGGCTaGCTCGCAAGATGTTTAAGT +
Preference number: 4 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLINQAG*LARCLS
Trigger: ACTTAAACATCTTGCGAGGCAGCCTGCCTGGTTTAT...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATTCAGAGCCTTGGCCCTaGCTTACTTGCCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHSEPWP*LTCLSC
Trigger: ACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCTCTGA...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATGGTCAACAGCTTGCATaGAGTTGCCGCACCAAACGT +
Preference number: 4 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYGQQLA*SCRTKR
Trigger: ACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACC...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAAAAAAGAGGAATATATTaGGGAGCAGTTTCCCCAATG +
Preference number: 4 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQKRGIY*GAVSPM
Trigger: CATTGGGGAAACTGCTCCCCAATATATTCCTCTTTT...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATCTATGCCTCAGTATTaGGGCAAACAGTCATTGTCT +
Preference number: 4 (lower is better)
Translates to: KHHGLQSSPINQAGCLARSMPQY*GKQSLS
Trigger: AGACAATGACTGTTTGCCCCAATACTGAGGCATAGA...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR TCA 90 bp GAAAGTTTTGCTGGGTATATTGGTAAGCCTTGTTGCTGTAATAATCTCCTTCGTGCTGATCCTCATCCGTaGACCGGCCCAGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: ESFAGYIGKPCCCNNLLRADPHP*TGPVVS
Trigger: TGACACAACTGGGCCGGTTCACGGATGAGGATCAGC...ACGAAGGAGATTATTACAGCAACAAGGCTTACCAATATACCCAGCAAAACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR TCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATTGGTGTGGGGAGAGATaGGAAGTCATCTGGTCAACA +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHWCGER*EVIWST
Trigger: TGTTGACCAGATGACTTCTCATCTCTCCCCACACCA...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTCTTGGTGGGGTGGTGTaGCCTCCTCTGCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALILGGVV*PPLPKS
Trigger: GGACTTGGGCAGAGGAGGTCACACCACCCCACCAAG...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATGATGCTGTTTCCTGTTaGACTCTTCCCACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHDAVSC*TLPTPC
Trigger: ACAGGGAGTGGGAAGAGTGCAACAGGAAACAGCATC...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATCGCACCAAACGTGACTaGATGACTCCAATGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHRTKRD*MTPMQS
Trigger: TGACTGCATTGGAGTCATGCAGTCACGTTTGGTGCG...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAGAGCAGTTTCCCCAATaGCTCCTATTATCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGEQFPQ*LLLSSQ
Trigger: TTGGGAAGATAATAGGAGGCATTGGGGAAACTGCTC...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp ACCAGACGTCATGACCTGGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAACACCAAATAACTCTGTaGTCTGCTTTGAGACACTTT +
Preference number: 4 (lower is better)
Translates to: TRRHDLETGKHSMGWKEKHQITL*SALRHF
Trigger: AAAGTGTCTCAAAGCAGAGCACAGAGTTATTTGGTG...TTTCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATGTTTACACCAAATAACTCTGTaGTCTGCTTTGAGACACTTT +
Preference number: 4 (lower is better)
Translates to: HGLQSSPINQAGCLARCLHQITL*SALRHF
Trigger: AAAGTGTCTCAAAGCAGAGCACAGAGTTATTTGGTG...TAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp GAAAGTTTTGCTGGGTATATTGGTAAGCCTTGTTGCTGTAATAATCTCCTTCGTAAAGGACCACGTTTCTaGTCTCCCGGCCACGCACTC +
Preference number: 4 (lower is better)
Translates to: ESFAGYIGKPCCCNNLLRKGPRF*SPGHAL
Trigger: GAGTGCGTGGCCGGGAGACCAGAAACGTGGTCCTTT...ACGAAGGAGATTATTACAGCAACAAGGCTTACCAATATACCCAGCAAAACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATGAGCCTCAGTCTCCTTaGGGTCTTCTGTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYEPQSP*GLLFFL
Trigger: GAGAAAGAACAGAAGACCCCAAGGAGACTGAGGCTC...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGTGCAGTCAAAAGCTGTaGAAGTTACACAGAAGTAAA +
Preference number: 4 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRCSQKL*KLHRSK
Trigger: TTTACTTCTGTGTAACTTCCACAGCTTTTGACTGCA...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATGAGCATCTCCAACAGTaGATGAGTGTCCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYEHLQQ*MSVQVD
Trigger: GTCTACCTGGACACTCATCCACTGTTGGAGATGCTC...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGAAGGGAGGATACCAGTaGTGGGATTATTTTTATCCT +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRKGGYQ*WDYFYP
Trigger: AGGATAAAAATAATCCCACCACTGGTATCCTCCCTT...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR TCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATCCCTGCTACGCAGCTTaGAGAAAGGAAAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHPCYAA*RKEKRN
Trigger: ATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGG...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATTTGTGTCAGGAGGAGTaGCTTTCCCTGATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHLCQEE*LSLISL
Trigger: AAGAGAGATCAGGGAAAGTCACTCCTCCTGACACAA...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR GCA 90 bp TCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTGCATGACTATTGGTAAGCCTTGTTaGTGTAATAATCTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: SSGQQLAWSCRTKRDCMTIGKPC*CNNLLR
Trigger: ACGAAGGAGATTATTACAGCAACAAGGCTTACCAAT...AGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp ACCAGACGTCATGACCTGGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAAATTGGTAAGCCTTGTTaGTGTAATAATCTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: TRRHDLETGKHSMGWKEKIGKPC*CNNLLR
Trigger: ACGAAGGAGATTATTACAGCAACAAGGCTTACCAAT...TTTCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTTCAAAGGAGGTGGGGTaGACCCGGGGCACATCAGTC +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALISKEVG*TRGTSV
Trigger: GACTGATGTGCCCCGGGTGCACCCCACCTCCTTTGA...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp GTTTTGCTGGGTATATTGGTAAGCCTTGTTGCTGTAATAATCTCCTTCGTTTTCCTGGGACAGCTCTTCTaGGGGATTCTCCTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: VLLGILVSLVAVIISFVFLGQLF*GILLGN
Trigger: ATTCCCCAGGAGAATCCCCCAGAAGAGCTGTCCCAG...GAAAACGAAGGAGATTATTACAGCAACAAGGCTTACCAATATACCCAGCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTTCTCGGCTCCGTCTCTaGGAGGTCTTGGTCACGGGT +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALISRLRL*EVLVTG
Trigger: ACCCGTGACCAAGACCTCCCAGAGACGGAGCCGAGA...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATAAGCACTCCATGGGATaGAAAGAGAAACAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYKHSMG*KEKQRA
Trigger: AGCCCTCTGTTTCTCTTTCCATCCCATGGAGTGCTT...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATAAGCACTCCATGGGATaGAAAGAGAAACAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHKHSMG*KEKQRA
Trigger: AGCCCTCTGTTTCTCTTTCCATCCCATGGAGTGCTT...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGCCCTCAAGAAACTTTaGTTCTATCAGAGTATAGAC +
Preference number: 4 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLALKKL*FYQSID
Trigger: GTCTATACTCTGATAGAACCAAAGTTTCTTGAGGGC...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGTGCAGTCAAAAGCTGTaGAAGTTACACAGAAGTAAA +
Preference number: 4 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLCSQKL*KLHRSK
Trigger: TTTACTTCTGTGTAACTTCCACAGCTTTTGACTGCA...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAGGAGGATACCAGTGGTaGGATTATTTTTATCCTGAG +
Preference number: 4 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGGGYQW*DYFYPE
Trigger: CTCAGGATAAAAATAATCCCACCACTGGTATCCTCC...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR TCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATCTCTGTGCTCTGCTTTaGGACACTTTTCTGAATCTG +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHLCALL*DTFLNL
Trigger: CAGATTCAGAAAAGTGTCTCAAAGCAGAGCACAGAG...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATTTGCCAGTTAGTCGCTaGATGGATCTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHLPVSR*MDLIWS
Trigger: TGACCAAATGAGATCCATTCAGCGACTAACTGGCAA...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGGACAAGGCCGATGTTTaGTTATATTTTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRDKADV*LYFQQN
Trigger: ATTTTGCTGAAAATATAAGCAAACATCGGCCTTGTC...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTAAAGGACCACGTTTCTaGTCTCCCGGCCACGCACTC +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALIKGPRF*SPGHAL
Trigger: GAGTGCGTGGCCGGGAGACCAGAAACGTGGTCCTTT...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGGCATGTTCAGTTCAATaGGAAATTGATCGCTTATTT +
Preference number: 4 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLACSVQ*EIDRLF
Trigger: AAATAAGCGATCAATTTCCCATTGAACTGAACATGC...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACAGTTAGTCGCTGAATaGATCTCATTTGGTCAAATG +
Preference number: 4 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGQLVAE*ISFGQM
Trigger: CATTTGACCAAATGAGATCCATTCAGCGACTAACTG...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTCAGCTTGCATGGAGTTaGCGCACCAAACGTGACTGC +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALIQLAWS*RTKRDC
Trigger: GCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTG...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTTGGTGTGACCTCCTCTaGCCAAGTCCACTTGCATCC +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALIWCDLL*PSPLAS
Trigger: GGATGCAAGTGGACTTGGGCAGAGGAGGTCACACCA...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTAGGCCTGAGACAGGATaGCATCCTACTCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALIRPETG*HPTPFS
Trigger: TGAGAAGGGAGTAGGATGTCATCCTGTCTCAGGCCT...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATACTCATGAAAGGCAATaGAATGAGATAGAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHTHERQ*NEIEGP
Trigger: TGGACCTTCTATCTCATTGCATTGCCTTTCATGAGT...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTCTAAGTCTACCTTGGTaGGGTGGTGTGACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALILSLPW*GGVTSS
Trigger: AGAGGAGGTCACACCACCCCACCAAGGTAGACTTAG...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATAAAAGAGGAATATATTaGGGAGCAGTTTCCCCAATG +
Preference number: 4 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHKRGIY*GAVSPM
Trigger: CATTGGGGAAACTGCTCCCCAATATATTCCTCTTTT...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CCA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATCAGTTAGTCGCTGAATaGATCTCATTTGGTCAAATG +
Preference number: 4 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYQLVAE*ISFGQM
Trigger: CATTTGACCAAATGAGATCCATTCAGCGACTAACTG...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTCCAAACGTGACTGCATaGCTCCAATGCAGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALIPNVTA*LQCSQK
Trigger: CTTTTGACTGCATTGGAGTCATGCAGTCACGTTTGG...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTGTTGAAAGTAGTCTGTaGCTTCTAGGAGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALIVESSL*LLGAEG
Trigger: GCCTTCTGCTCCTAGAAGGCACAGACTACTTTCAAC...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
3UTR CAA 72 bp GTCTTCAGCAAACACCAAATAACTCTGTGCTCTGCTTaGAGACACTTTTCTGAATCTGTTAGCAAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: VFSKHQITLCSA*RHFSESVSKRN
Trigger: ATTTCTCTTGCTAACAGATTCAGAAAAGTGTCTCAAAGCAGAGCACAGAGTTATTTGGTGTTTGCTGAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR TCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTTTCTGGAAGAAGGAATaGAGGAACTGGAATGTGATC +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALIFWKKE*RNWNVI
Trigger: GATCACATTCCAGTTCCTTCATTCCTTCTTCCAGAA...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR GCA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTACTCATGAAAGGCAATaGAATGAGATAGAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SVALEFQVCSLRNKMALITHERQ*NEIEGP
Trigger: TGGACCTTCTATCTCATTGCATTGCCTTTCATGAGT...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp GGCAAGGGCCTGGTTGTTGGTCTCTCGCACATAGTCTTCCAGGGAGCCGCCAGCCATGAGCTCTCGCAGTaGGGCCTCCTGCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GKGLVVGLSHIVFQGAASHELSQ*GLLLLP
Trigger: GGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATG...GCTGGCGGCTCCCTGGAAGACTATGTGCGAGAGACCAACAACCAGGCCCTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CAA 90 bp AACTTTCTCCATGAGCTCTCGCAGTTGGGCCTCCTGCTCCTCCCCCTGTGCCCTCACGTCCTCAGAGCCTaGGCCCTGGCTTACTTGCCT +
Preference number: 5 (lower is better)
Translates to: NFLHELSQLGLLLLPLCPHVLRA*ALAYLP
Trigger: AGGCAAGTAAGCCAGGGCCAAGGCTCTGAGGACGTG...AGGGCACAGGGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATGGAGAAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CAA 90 bp AAGGGCCTGGTTGTTGGTCTCTCGCACATAGTCTTCCAGGGAGCCGCCAGCCAGAGGCTGATGGTGTCCTaGGCTCAAGTCCAGCACAGG +
Preference number: 5 (lower is better)
Translates to: KGLVVGLSHIVFQGAASQRLMVS*AQVQHR
Trigger: CCTGTGCTGGACTTGAGCCAAGGACACCATCAGCCT...CTGGCTGGCGGCTCCCTGGAAGACTATGTGCGAGAGACCAACAACCAGGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CAA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCACGTCTCTGGGAGGTCTaGGTCACGGGTCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPRLWEV*VTGLVL
Trigger: CAGCACCAGACCCGTGACCAAGACCTCCCAGAGACG...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCATCCCCCTGTGCCCTGTaGTTGAAGCCGCAATGGCGC +
Preference number: 5 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPSPCAL*LKPQWR
Trigger: GCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGA...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp CCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCTCCCCAGGAGCATCTaGGACCTCAAAGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PNVGQLPRSILDLKGGGVLPRSI*DLKGGG
Trigger: CCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAG...CACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCGACATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS CCA 90 bp TCCATCTCTGCACCAGCTCACAGGCAAGAGAAAGGACCACGTTTCTaGTCTCCCGGCCACGCACTCTCACGGAGGAGGCAGAGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: SISAPAHRQEKGPRF*SPGHALSRRRQRKA
Trigger: AGCTTTTCTCTGCCTCCTCCGTGAGAGTGCGTGGCCGGGAGACCAGAAACGTGGTCCTTTCTCTTGCCTGTGAGCTGGTGCAGAGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328902.9
ENST00000493969.2
ENST00000618759.4
CDS-3UTR CAA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGACGTGAACCGGCCCAGTaGTGTCACCAGGAGCACGGC +
Preference number: 5 (lower is better)
Translates to: KHHGLQSSPINQAGCLARREPAQ*CHQEHG
Trigger: GCCGTGCTCCTGGTGACACAACTGGGCCGGTTCACG...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGCCCTGTGCCCTGTTGTaGAAGCCGCAATGGCGCCGT +
Preference number: 5 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRPCALL*KPQWRR
Trigger: ACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGG...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACCATGAGCTCTCGCAGTaGGGCCTCCTGCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADHELSQ*GLLLLP
Trigger: GGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATG...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGCATGAGCTCTCGCAGTaGGGCCTCCTGCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLHELSQ*GLLLLP
Trigger: GGGGAGGAGCAGGAGGCCCAACTGCGAGAGCTCATG...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGCGTGAACCGGCCCAGTaGTGTCACCAGGAGCACGGC +
Preference number: 5 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKREPAQ*CHQEHG
Trigger: GCCGTGCTCCTGGTGACACAACTGGGCCGGTTCACG...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp GAGCCTTGGCCCTGGCTTACTTGCCTTTCCTGTAGTTCTTTCAGCCGAAAGTTTCGTGAACCGGCCCAGTaGTGTCACCAGGAGCACGGC +
Preference number: 5 (lower is better)
Translates to: EPWPWLTCLSCSSFSRKFREPAQ*CHQEHG
Trigger: GCCGTGCTCCTGGTGACACAACTGGGCCGGTTCACG...AAACTTTCGGCTGAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CAA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCCCTGTGCCCTGTTGTaGAAGCCGCAATGGCGCCGT +
Preference number: 5 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRPCALL*KPQWRR
Trigger: ACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGG...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TTGGGCCTCCTGCTCCTCCCCCTGTGCCCTGTTGTTGAAGCCGCAATGGCGCCGTTTCAGCCGAAAGTTTaGCTGGGTATATTGGTAAGC +
Preference number: 5 (lower is better)
Translates to: LGLLLLPLCPVVEAAMAPFQPKV*LGILVS
Trigger: GCTTACCAATATACCCAGCAAAACTTTCGGCTGAAA...CGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CAA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAACTCCCCAGGAGCATCTaGGACCTCAAAGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQLPRSI*DLKGGG
Trigger: CCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAG...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp GGTCCAATAGGAAGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATCAGAAGAGTCTGCTGTaGCACTTTGCAGCCTCGGAA +
Preference number: 5 (lower is better)
Translates to: GPIGRQRAVGAQRREDPDQKSLL*HFAASE
Trigger: TTCCGAGGCTGCAAAGTGCAACAGCAGACTCTTCTG...ATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR CAA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGCGTCTCTGGGAGGTCTaGGTCACGGGTCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKRLWEV*VTGLVL
Trigger: CAGCACCAGACCCGTGACCAAGACCTCCCAGAGACG...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp CCTTGGCCCTGGCTTACTTGCCTTTCCTGTAGTTCTTTCAGCCGAAAGTTTTGCCCCTGTGCCCTGTTGTaGAAGCCGCAATGGCGCCGT +
Preference number: 5 (lower is better)
Translates to: PWPWLTCLSCSSFSRKFCPCALL*KPQWRR
Trigger: ACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGG...GCAAAACTTTCGGCTGAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CAA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACCACGTCCTCAGAGCCTaGGCCCTGGCTTACTTGCCT +
Preference number: 5 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADHVLRA*ALAYLP
Trigger: AGGCAAGTAAGCCAGGGCCAAGGCTCTGAGGACGTG...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp CGGTCAACTCCCCAGGAGCATCTTGGACCTCAAAGGAGGTGGGGTGCACCCGGGACTCTGTGCTCTGCTTaGAGACACTTTTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: RSTPQEHLGPQRRWGAPGTLCSA*RHFSES
Trigger: AGATTCAGAAAAGTGTCTCAAAGCAGAGCACAGAGT...CCCGGGTGCACCCCACCTCCTTTGAGGTCCAAGATGCTCCTGGGGAGTTGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AGCCTTGGCCCTGGCTTACTTGCCTTTCCTGTAGTTCTTTCAGCCGAAAGTTTTTCCCCCTGTGCCCTGTaGTTGAAGCCGCAATGGCGC +
Preference number: 5 (lower is better)
Translates to: SLGPGLLAFPVVLSAESFSPCAL*LKPQWR
Trigger: GCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGA...AAAACTTTCGGCTGAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CAA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACCATCTGGTCAACAGCTaGCATGGAGTTGCCGCACCA +
Preference number: 5 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADHLVNS*HGVAAP
Trigger: TGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATG...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAACCACAGTCTGACTTCTaGGATACCCTGCCCCAAACT +
Preference number: 5 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQPQSDF*DTLPQT
Trigger: AGTTTGGGGCAGGGTATCCAAGAAGTCAGACTGTGG...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGGAAGGGCGAGGCAGGTaGAAAGTAGTCTGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLEGRGR*KVVCAF
Trigger: GAAGGCACAGACTACTTTCAACCTGCCTCGCCCTTC...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAATTCTTCCCTGCCTCCTaGCATTGGACCCCCACAAAT +
Preference number: 5 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQFFPAS*HWTPTN
Trigger: ATTTGTGGGGGTCCAATGCAAGGAGGCAGGGAAGAA...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTGCATGACTACTCTACTGCTTCCTTaGCAGGCCCCCTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SSGQQLAWSCRTKRDCMTTLLLP*QAPFLP
Trigger: GGGAAGAAAGGGGGCCTGCAAAGGAAGCAGTAGAGT...AGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACACTCTACTGCTTCCTTaGCAGGCCCCCTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADTLLLP*QAPFLP
Trigger: GGGAAGAAAGGGGGCCTGCAAAGGAAGCAGTAGAGT...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp CATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGATGTTTACACATCAGTCTCCTCTaGCTGGCAGGCAGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: HGLQSSPINQAGCLARCLHISLL*LAGSFL
Trigger: TAGGAAGCTGCCTGCCAGCAAGAGGAGACTGATGTG...TAAACATCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp GGTCCAATAGGAAGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATTTTCAGCCGAAAGTTTaGCTGGGTATATTGGTAAGC +
Preference number: 5 (lower is better)
Translates to: GPIGRQRAVGAQRREDPDFQPKV*LGILVS
Trigger: GCTTACCAATATACCCAGCAAAACTTTCGGCTGAAA...ATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCTTCCTATTGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAAGGCTGATGGTGTCCTaGGCTCAAGTCCAGCACAGG +
Preference number: 5 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGRLMVS*AQVQHR
Trigger: CCTGTGCTGGACTTGAGCCAAGGACACCATCAGCCT...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTCATCTGGTCAACAGCTaGCATGGAGTTGCCGCACCA +
Preference number: 5 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLHLVNS*HGVAAP
Trigger: TGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATG...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCATCCACATGCTCCCATCCAACGGGGCTTGTTaGTTACAGCTCAAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: YFAREPVCTRRHPIHMLPSNGAC*LQLKSE
Trigger: TTCACTCTTGAGCTGTAACAAACAAGCCCCGTTGGA...TGGGAGCATGTGGATGGGGTGTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAAACCCCCACAAATACTTaGCTAGGGAACCCGTTTGCA +
Preference number: 5 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQTPTNT*LGNPFA
Trigger: TGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGT...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGCTGCCTCGCAAGACCCTGCCTCCTTGCATaGGACCCCCACAAATACTTT +
Preference number: 5 (lower is better)
Translates to: KHHGLQSSPINQAGCLARPCLLA*DPHKYF
Trigger: AAAGTATTTGTGGGGGTCCAATGCAAGGAGGCAGGG...TCTTGCGAGGCAGCCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAATTCTATGCCTCAGTATaGGGGCAAACAGTCATTGTC +
Preference number: 5 (lower is better)
Translates to: RQRAVGAQRREDPDVLEEFYASV*GQTVIV
Trigger: GACAATGACTGTTTGCCCCAATACTGAGGCATAGAA...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR CAA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGCCCATGTACCCCATCTaGTCATCACCAGGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKPMYPI*SSPGAS
Trigger: AGAGGCTCCTGGTGATGACAAGATGGGGTACATGGG...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS-3UTR CAA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATCACGTCCTCAGAGCCTaGGCCCTGGCTTACTTGCCT +
Preference number: 5 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYHVLRA*ALAYLP
Trigger: AGGCAAGTAAGCCAGGGCCAAGGCTCTGAGGACGTG...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TTGCATTGGACCCCCACAAATACTTTGCTAGGGAACCCGTTTGCACACGCAGACACCCCCACAAATACTTaGCTAGGGAACCCGTTTGCA +
Preference number: 5 (lower is better)
Translates to: LHWTPTNTLLGNPFAHADTPTNT*LGNPFA
Trigger: TGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGT...GTCTGCGTGTGCAAACGGGTTCCCTAGCAAAGTATTTGTGGGGGTCCAATGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TCTGACTTCTTGGATACCCTGCCCCAAACTTCTCCCATCATTCCCACTAGGAAGCCCTGCCTCCTTGCATaGGACCCCCACAAATACTTT +
Preference number: 5 (lower is better)
Translates to: SDFLDTLPQTSPIIPTRKPCLLA*DPHKYF
Trigger: AAAGTATTTGTGGGGGTCCAATGCAAGGAGGCAGGG...CTTCCTAGTGGGAATGATGGGAGAAGTTTGGGGCAGGGTATCCAAGAAGTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AGACAGCGTGCTGTTGGGGCACAGAGGAGGGAGGACCCAGATGTTCTGGAAGAAACTCTGTGCTCTGCTTaGAGACACTTTTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: RQRAVGAQRREDPDVLEETLCSA*RHFSES
Trigger: AGATTCAGAAAAGTGTCTCAAAGCAGAGCACAGAGT...TTCTTCCAGAACATCTGGGTCCTCCCTCCTCTGTGCCCCAACAGCACGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATAGGCTGATGGTGTCCTaGGCTCAAGTCCAGCACAGG +
Preference number: 5 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYRLMVS*AQVQHR
Trigger: CCTGTGCTGGACTTGAGCCAAGGACACCATCAGCCT...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp CAGCCTTCCAGGAAAACATCATGGGCTTCAGAGTTCTCCCATAAACCAGGCAGGTCCAACGGGGCTTGTTaGTTACAGCTCAAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: QPSRKTSWASEFSHKPGRSNGAC*LQLKSE
Trigger: TTCACTCTTGAGCTGTAACAAACAAGCCCCGTTGGA...CCTGCCTGGTTTATGGGAGAACTCTGAAGCCCATGATGTTTTCCTGGAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp ACCAGACGTCATGACCTGGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAAAAGTTCCAACGGGGCTaGTTTGTTACAGCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: TRRHDLETGKHSMGWKEKKFQRG*FVTAQE
Trigger: CTCTTGAGCTGTAACAAACAAGCCCCGTTGGAACTT...TTTCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGATTCTTCCCTGCCTCCTaGCATTGGACCCCCACAAAT +
Preference number: 5 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGFFPAS*HWTPTN
Trigger: ATTTGTGGGGGTCCAATGCAAGGAGGCAGGGAAGAA...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp CCACATAATGGCTTCAACTTTCTCCATGAGCTCTCGCAGTTGGGCCTCCTGCTCGTTTTGCTGGGTATATaGGTAAGCCTTGTTGCTGTA +
Preference number: 5 (lower is better)
Translates to: PHNGFNFLHELSQLGLLLVLLGI*VSLVAV
Trigger: TACAGCAACAAGGCTTACCAATATACCCAGCAAAAC...GAGCAGGAGGCCCAACTGCGAGAGCTCATGGAGAAAGTTGAAGCCATTATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CAA 90 bp AAGAGGCCACAGGTCGGCTGTGAGCATCTGTGTCTAGCTGTTGAGCATCTCCAAGTTTTGCTGGGTATATaGGTAAGCCTTGTTGCTGTA +
Preference number: 5 (lower is better)
Translates to: KRPQVGCEHLCLAVEHLQVLLGI*VSLVAV
Trigger: TACAGCAACAAGGCTTACCAATATACCCAGCAAAAC...TTGGAGATGCTCAACAGCTAGACACAGATGCTCACAGCCGACCTGTGGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp CCCAATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTAAGTTCCAACGGGGCTaGTTTGTTACAGCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: PNASYYLPKCRSTPQEHLKFQRG*FVTAQE
Trigger: CTCTTGAGCTGTAACAAACAAGCCCCGTTGGAACTT...AAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATCACATCAGTCTCCTCTaGCTGGCAGGCAGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYHISLL*LAGSFL
Trigger: TAGGAAGCTGCCTGCCAGCAAGAGGAGACTGATGTG...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TCCTCAGAGCCTTGGCCCTGGCTTACTTGCCTTTCCTGTAGTTCTTTCAGCCGAATTCTCCTGGGGAATTaGTTCATATTCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SSEPWPWLTCLSCSSFSRILLGN*FIFFFL
Trigger: GAGGAAGAAGAATATGAACAAATTCCCCAGGAGAAT...TCGGCTGAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCAAGGCTCTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS-3UTR CAA 90 bp CTGTGTCTAGCTGTTGAGCATCTCCAACAGTGGATGAGTGTCCAGGTAGACCTGGTTTTGCTGGGTATATaGGTAAGCCTTGTTGCTGTA +
Preference number: 5 (lower is better)
Translates to: LCLAVEHLQQWMSVQVDLVLLGI*VSLVAV
Trigger: TACAGCAACAAGGCTTACCAATATACCCAGCAAAAC...CAGGTCTACCTGGACACTCATCCACTGTTGGAGATGCTCAACAGCTAGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TCATCTGGTCAACAGCTTGCATGGAGTTGCCGCACCAAACGTGACTGCATGACTTTTCAGCCGAAAGTTTaGCTGGGTATATTGGTAAGC +
Preference number: 5 (lower is better)
Translates to: SSGQQLAWSCRTKRDCMTFQPKV*LGILVS
Trigger: GCTTACCAATATACCCAGCAAAACTTTCGGCTGAAA...AGTCATGCAGTCACGTTTGGTGCGGCAACTCCATGCAAGCTGTTGACCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AAACTAGCTAAAGGCCCCCTGCTACGCAGCTTGAAGAAAGGAAAAGAGGAATATCCACAGTCTGACTTCTaGGATACCCTGCCCCAAACT +
Preference number: 5 (lower is better)
Translates to: KLAKGPLLRSLKKGKEEYPQSDF*DTLPQT
Trigger: AGTTTGGGGCAGGGTATCCAAGAAGTCAGACTGTGG...ATATTCCTCTTTTCCTTTCTTCAAGCTGCGTAGCAGGGGGCCTTTAGCTAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp ACCAGACGTCATGACCTGGAGACTGGGAAGCACTCCATGGGATGGAAAGAGAAAGGACAAGGCCGATGTTaGCTTATATTTTCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: TRRHDLETGKHSMGWKEKGQGRC*LIFSAK
Trigger: TTTTGCTGAAAATATAAGCAAACATCGGCCTTGTCC...TTTCTCTTTCCATCCCATGGAGTGCTTCCCAGTCTCCAGGTCATGACGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTTCCCCCTGTGCCCTGTaGTTGAAGCCGCAATGGCGC +
Preference number: 5 (lower is better)
Translates to: SVALEFQVCSLRNKMALISPCAL*LKPQWR
Trigger: GCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGA...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TCTCAGATGTCTGCTGTGTCTAGGGAAGATGGGGGATGGCTTCAGAGCAAGAGGCTGAATGGATCTCATTaGGTCAAATGCTTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: SQMSAVSREDGGWLQSKRLNGSH*VKCLCF
Trigger: AAAACACAAGCATTTGACCAAATGAGATCCATTCAG...CCTCTTGCTCTGAAGCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp AATGCCTCCTATTATCTTCCCAAATGTCGGTCAACTCCCCAGGAGCATCTTGGAATTCTCCTGGGGAATTaGTTCATATTCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: NASYYLPKCRSTPQEHLGILLGN*FIFFFL
Trigger: GAGGAAGAAGAATATGAACAAATTCCCCAGGAGAAT...TCCAAGATGCTCCTGGGGAGTTGACCGACATTTGGGAAGATAATAGGAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TCAGTAGCTCTGGAGTTTCAAGTCTGTTCACTTAGAAATAAAATGGCCTTAATTGAAGGGCGAGGCAGGTaGAAAGTAGTCTGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: SVALEFQVCSLRNKMALIEGRGR*KVVCAF
Trigger: GAAGGCACAGACTACTTTCAACCTGCCTCGCCCTTC...AATTAAGGCCATTTTATTTCTAAGTGAACAGACTTGAAACTCCAGAGCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATATTCTCCTGGGGAATTaGTTCATATTCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHILLGN*FIFFFL
Trigger: GAGGAAGAAGAATATGAACAAATTCCCCAGGAGAAT...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp CCAGTATCAGTACTTATAAACCCCGTCTGTAGGAACAGCCTTCCAGGAAAACATCTGAATGGATCTCATTaGGTCAAATGCTTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: PVSVLINPVCRNSLPGKHLNGSH*VKCLCF
Trigger: AAAACACAAGCATTTGACCAAATGAGATCCATTCAG...ATGTTTTCCTGGAAGGCTGTTCCTACAGACGGGGTTTATAAGTACTGATACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS-3UTR CAA 90 bp TTTGCTGGGTATATTGGTAAGCCTTGTTGCTGTAATAATCTCCTTCGTTTTCCCGGACAAGGCCGATGTTaGCTTATATTTTCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: FAGYIGKPCCCNNLLRFPGQGRC*LIFSAK
Trigger: TTTTGCTGAAAATATAAGCAAACATCGGCCTTGTCC...GGGAAAACGAAGGAGATTATTACAGCAACAAGGCTTACCAATATACCCAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS CCA 72 bp ACGGCGTGGGGCCCTGGGGCGGATAAGACGATGGCTTaGCAGATAGCGTCTGCCACCTCTGGCGAGACCTGG +
Preference number: 6 (lower is better)
Translates to: TAWGPGADKTMA*QIASATSGETW
Trigger: CCAGGTCTCGCCAGAGGTGGCAGACGCTATCTGCCAAGCCATCGTCTTATCCGCCCCAGGGCCCCACGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS CCA 72 bp ACGGCGTGGGGCCCTGGGGCGGATAAGACGATGGCTTaGCAGATAGCGTCTGCCACCTCTGGCGAGACCTCC +
Preference number: 6 (lower is better)
Translates to: TAWGPGADKTMA*QIASATSGETS
Trigger: GGAGGTCTCGCCAGAGGTGGCAGACGCTATCTGCCAAGCCATCGTCTTATCCGCCCCAGGGCCCCACGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493969.2
CDS CAA 90 bp TCTGCCCTGAAACCAGCGCTGGGCCACCATTCTGGGCCCACATCCTaGAAGGTGGGGCTGAACGTTCTCTCCCAGTGCAAGAGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: SALKPALGHHSGPTS*KVGLNVLSQCKSRA
Trigger: GGCTCTGCTCTTGCACTGGGAGAGAACGTTCAGCCCCACCTTCAAGGATGTGGGCCCAGAATGGTGGCCCAGCGCTGGTTTCAGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS CAA 72 bp TTCCCAGCCCACTCTCGGCTCCGTCTCTGGGAGGTCTaGGTCACGGGTCTGGTGCTGAGTTTAGACTCGAAG +
Preference number: 6 (lower is better)
Translates to: FPAHSRLRLWEV*VTGLVLSLDSK
Trigger: CTTCGAGTCTAAACTCAGCACCAGACCCGTGACCAAGACCTCCCAGAGACGGAGCCGAGAGTGGGCTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328902.9
ENST00000618759.4
CDS CAA 72 bp AAACCAGCGCTGGGCCACCATTCTGGGCCCACATCCTaGAAGGTGGGGCTGAACGTTCTCTCCCAGTGCAAG +
Preference number: 6 (lower is better)
Translates to: KPALGHHSGPTS*KVGLNVLSQCK
Trigger: CTTGCACTGGGAGAGAACGTTCAGCCCCACCTTCAAGGATGTGGGCCCAGAATGGTGGCCCAGCGCTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS CAA 90 bp AAGTGGGTAGGAGCACCGGCCTTCCTGAGTCAGAAGAGTCTGCTGTaGCACTTTGCAGCCTCGGAAGTAGAAAAAGGGAGGATACCAGTG +
Preference number: 6 (lower is better)
Translates to: KWVGAPAFLSQKSLL*HFAASEVEKGRIPV
Trigger: CACTGGTATCCTCCCTTTTTCTACTTCCGAGGCTGCAAAGTGCAACAGCAGACTCTTCTGACTCAGGAAGGCCGGTGCTCCTACCCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS CCA 72 bp ACAGGATCCTGGGACAGCTCTTCTGGGGGATTCTCCTaGGGAATTTGTTCATATTCTTCTTCCTCCATCTCT +
Preference number: 6 (lower is better)
Translates to: TGSWDSSSGGFS*GICSYSSSSIS
Trigger: AGAGATGGAGGAAGAAGAATATGAACAAATTCCCCAGGAGAATCCCCCAGAAGAGCTGTCCCAGGATCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328902.9
ENST00000493969.2
ENST00000618759.4
CDS GCA 72 bp AGGATAACTAGAACTCAGAGCTTAAAAAGAGGCAGATaGCTCAGAAAGATTTGTGTCAGGAGGAGTGACTTT +
Preference number: 6 (lower is better)
Translates to: RITRTQSLKRGR*LRKICVRRSDF
Trigger: AAAGTCACTCCTCCTGACACAAATCTTTCTGAGGCATCTGCCTCTTTTTAAGCTCTGAGTTCTAGTTATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618759.4
CDS TCA 72 bp AAAGGGAGGATACCAGTGGTGGGATTATTTTTATCCTaGGCCAGGATAACTAGAACTCAGAGCTTAAAAAGA +
Preference number: 6 (lower is better)
Translates to: KGRIPVVGLFLS*ARITRTQSLKR
Trigger: TCTTTTTAAGCTCTGAGTTCTAGTTATCCTGGCTCAGGATAAAAATAATCCCACCACTGGTATCCTCCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618759.4