RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GIMAP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000196329

Ensembl transcript IDs: ENST00000358647.5, ENST00000466347.5, ENST00000469272.1, ENST00000476324.1, ENST00000479556.1, ENST00000493304.2, ENST00000498181.6

Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAACTCTCTGTGCTGCTCTGAGGCACTGCCTTCAATCTCAGGTTaGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGACCC +
Preference number: 1 (lower is better)
Translates to: PNSLCCSEALPSISG*QHKAAESPSVTPRP
Trigger: GGGTCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACCTGAGATTGAAGGCAGTGCCTCAGAGCAGCACAGAGAGTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR TCA 90 bp TTTACTCACTTCTCAGGGACCTGCATGGGATCTCAGGCCCATTCCTaGAGCAGTTGTTGGCAGACAGAGTGGAATAGTGTTTACAGCAGG +
Preference number: 1 (lower is better)
Translates to: FTHFSGTCMGSQAHS*SSCWQTEWNSVYSR
Trigger: CCTGCTGTAAACACTATTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGATCCCATGCAGGTCCCTGAGAAGTGAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR CCA 90 bp TCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGGGCAGGCAGGCAGCCTTaGAGTGGAGGCACACAGCTC +
Preference number: 2 (lower is better)
Translates to: SSIPTSADFYSLLRDLHGAGRQP*SGGTQL
Trigger: GAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCCTGC...CCCATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR TCA 90 bp GGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATTCTCAGGCCCATTCCTaGAGCAGTTGTTGGCAGACA +
Preference number: 2 (lower is better)
Translates to: GWQHKAAESPSVTPRPHNSQAHS*SSCWQT
Trigger: TGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGA...ATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR CCA 90 bp TCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGGCAGGCAGCCTTGGAGTaGAGGCACACAGCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: SSIPTSADFYSLLRDLHGQAALE*RHTAPS
Trigger: ACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTG...CCCATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR CCA 90 bp TCAATCTCAGGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGACAGGCAGCCTTGGAGTaGAGGCACACAGCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: SISGWQHKAAESPSVTPRQAALE*RHTAPS
Trigger: ACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTG...TCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACCTGAGATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR GCA 90 bp TCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGGAGGGGAAATGGGAGCTaGACAGACAGCAAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: SSIPTSADFYSLLRDLHGRGNGS*TDSKQH
Trigger: ATGCTGCTTGCTGTCTGTGCAGCTCCCATTTCCCCT...CCCATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR CAA 90 bp TGTTGGCAGACAGAGTGGAATAGTGTTTACAGCAGGCAGGCAGCCTaGGAGTGGAGGCACACAGCTCCAAGTCTATCAGGAAGAAGGGGA +
Preference number: 2 (lower is better)
Translates to: CWQTEWNSVYSRQAA*EWRHTAPSLSGRRG
Trigger: TCCCCTTCTTCCTGATAGACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCCTGCTGTAAACACTATTCCACTCTGTCTGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR GCA 90 bp CTGCCTTCAATCTCAGGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGAGACAGCAAGCAGCATaGTCCATAGACCACGAGGAT +
Preference number: 2 (lower is better)
Translates to: LPSISGWQHKAAESPSVTRQQAA*SIDHED
Trigger: ATCCTCGTGGTCTATGGAGCATGCTGCTTGCTGTCT...CGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACCTGAGATTGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR TCA 90 bp CTAAGGAGAGATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGTCTCAGGCCCATTCCTaGAGCAGTTGTTGGCAGACA +
Preference number: 2 (lower is better)
Translates to: LRRDLPSPPLRTFTHFSGSQAHS*SSCWQT
Trigger: TGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGA...CCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATCTCTCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR GCA 90 bp GATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGAGACAGCAAGCAGCATaGTCCATAGACCACGAGGAT +
Preference number: 2 (lower is better)
Translates to: DLPSPPLRTFTHFSGTCMRQQAA*SIDHED
Trigger: ATCCTCGTGGTCTATGGAGCATGCTGCTTGCTGTCT...CATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR TCA 90 bp CTAAGGAGAGATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGAATGACTCCATGGGGTaGTACATTAGAAGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: LRRDLPSPPLRTFTHFSGNDSMG*YIRSAP
Trigger: TGGAGCACTTCTAATGTATCACCCCATGGAGTCATT...CCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATCTCTCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR CAA 90 bp ACAGCAAGCAGCATGCTCCATAGACCACGAGGATCTGAGTCTGAATaGGTGATTATTAGAACAATGACTCCATGGGGTGATACATTAGAA +
Preference number: 2 (lower is better)
Translates to: TASSMLHRPRGSESE*VIIRTMTPWGDTLE
Trigger: TTCTAATGTATCACCCCATGGAGTCATTGTTCTAATAATCACCAATTCAGACTCAGATCCTCGTGGTCTATGGAGCATGCTGCTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR GCA 72 bp GTGGCTCAGGGCTCAGGGGGCCCCAACTCTCTGTGCTaGTCTGAGGCACTGCCTTCAATCTCAGGTTGGCAG +
Preference number: 3 (lower is better)
Translates to: VAQGSGGPNSLC*SEALPSISGWQ
Trigger: CTGCCAACCTGAGATTGAAGGCAGTGCCTCAGAGCAGCACAGAGAGTTGGGGCCCCCTGAGCCCTGAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR TCA 72 bp TCAGGGCTCAGGGGGCCCCAACTCTCTGTGCTGCTCTaGGGCACTGCCTTCAATCTCAGGTTGGCAGCACAA +
Preference number: 3 (lower is better)
Translates to: SGLRGPQLSVLL*GTAFNLRLAAQ
Trigger: TTGTGCTGCCAACCTGAGATTGAAGGCAGTGCCTCAGAGCAGCACAGAGAGTTGGGGCCCCCTGAGCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR CAA 90 bp GAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGACTAGCAGGCAGGCAGCCTaGGAGTGGAGGCACACAGCT +
Preference number: 3 (lower is better)
Translates to: EEDRFYLRRDLPSPPLRTSRQAA*EWRHTA
Trigger: AGCTGTGTGCCTCCACTCCAAGGCTGCCTGCCTGCT...AGTCCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR TCA 72 bp ACTGCCTTCAATCTCAGGTTGGCAGCACAAAGCTGCTaGGAGTCCCAGTGTCACGCCCAGACCCCACAATGC +
Preference number: 3 (lower is better)
Translates to: TAFNLRLAAQSC*ESQCHAQTPQC
Trigger: GCATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACCTGAGATTGAAGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR CAA 90 bp GGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATCCATTCCTGAAGCAGTaGTTGGCAGACAGAGTGGAA +
Preference number: 3 (lower is better)
Translates to: GWQHKAAESPSVTPRPHNPFLKQ*LADRVE
Trigger: TTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGG...ATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR TCA 72 bp TTCTCAGGGACCTGCATGGGATCTCAGGCCCATTCCTaGAGCAGTTGTTGGCAGACAGAGTGGAATAGTGTT +
Preference number: 3 (lower is better)
Translates to: FSGTCMGSQAHS*SSCWQTEWNSV
Trigger: AACACTATTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGATCCCATGCAGGTCCCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR CAA 90 bp CAGGCAGGCAGCCTTGGAGTGGAGGCACACAGCTCCAAGTCTATCAGGAAGAAGGGATCTGAGTCTGAATaGGTGATTATTAGAACAATG +
Preference number: 3 (lower is better)
Translates to: QAGSLGVEAHSSKSIRKKGSESE*VIIRTM
Trigger: CATTGTTCTAATAATCACCAATTCAGACTCAGATCC...CTTCTTCCTGATAGACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR-3UTR CAA 90 bp TGGGATCTCAGGCCCATTCCTGAAGCAGTTGTTGGCAGACAGAGTGGAATAGTGGGATCTGAGTCTGAATaGGTGATTATTAGAACAATG +
Preference number: 3 (lower is better)
Translates to: WDLRPIPEAVVGRQSGIVGSESE*VIIRTM
Trigger: CATTGTTCTAATAATCACCAATTCAGACTCAGATCC...CACTATTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGATCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp GGCAGGCAGCCTTGGAGTGGAGGCACACAGCTCCAAGTCTATCAGGAAGAAGGGGGAGATAGGGCAGGCTaGAGGGCTGGTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRQPWSGGTQLQVYQEEGGDRAG*RAGGSG
Trigger: CCCTGAGCCACCAGCCCTGCAGCCTGCCCTATCTCC...CCCTTCTTCCTGATAGACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp TCAATCTCAGGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGAAGGCTGCAGGGCTGGTaGCTCAGGGCTCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SISGWQHKAAESPSVTPRRLQGW*LRAQGA
Trigger: GGCCCCCTGAGCCCTGAGCCACCAGCCCTGCAGCCT...TCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACCTGAGATTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATGCACGTCCTGGTCACTaGCTGGGCCCTCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GWQHKAAESPSVTPRPHNARPGH*LGPQLG
Trigger: TCCAAGCTGAGGGCCCAGTCAGTGACCAGGACGTGC...ATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp GCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATGCCAGGGAGGAAGACTGCTCTGCGTCTGTGTaGGGGGATGCTGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: AAESPSVTPRPHNAREEDCSASV*GDAVHR
Trigger: CCTGTGAACAGCATCCCCGCACACAGACGCAGAGCA...GTCTTCCTCCCTGGCATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GGCAGGCAGCCTTGGAGTGGAGGCACACAGCTCCAAGTCTATCAGGAAGAAGGGGCAGGCAGGCAGCCTTaGAGTGGAGGCACACAGCTC +
Preference number: 4 (lower is better)
Translates to: GRQPWSGGTQLQVYQEEGAGRQP*SGGTQL
Trigger: GAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCCTGC...CCCTTCTTCCTGATAGACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp AGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGAGGCTGCAGGGCTGGTaGCTCAGGGCTCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: REEDRFYLRRDLPSPPLRRLQGW*LRAQGA
Trigger: GGCCCCCTGAGCCCTGAGCCACCAGCCCTGCAGCCT...CCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATGCAGCACAAAGCTGCTaGGAGTCCCAGTGTCACGCC +
Preference number: 4 (lower is better)
Translates to: GWQHKAAESPSVTPRPHNAAQSC*ESQCHA
Trigger: GGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGC...ATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp TCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGGGGAGATAGGGCAGGCTaGAGGGCTGGTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SSIPTSADFYSLLRDLHGGDRAG*RAGGSG
Trigger: CCCTGAGCCACCAGCCCTGCAGCCTGCCCTATCTCC...CCCATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATGCCAGGGAGGAAGACCTCAGGAAGGTGAAGTaGCAGCAGAGAGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: AAESPSVTPRPHNAREEDLRKVK*QQRESC
Trigger: GCAGGACTCTCTCTGCTGCCACTTCACCTTCCTGAG...GTCTTCCTCCCTGGCATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATGCCATGTGCTGGGGCTaGAAGCTCCATGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: GWQHKAAESPSVTPRPHNAMCWG*KLHDSA
Trigger: AGCTGAGTCATGGAGCTTTCAGCCCCAGCACATGGC...ATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp CAGGCAGGCAGCCTTGGAGTGGAGGCACACAGCTCCAAGTCTATCAGGAAGAAGGCAGCACAAAGCTGCTaGGAGTCCCAGTGTCACGCC +
Preference number: 4 (lower is better)
Translates to: QAGSLGVEAHSSKSIRKKAAQSC*ESQCHA
Trigger: GGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGC...CTTCTTCCTGATAGACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp GGCAGGCAGCCTTGGAGTGGAGGCACACAGCTCCAAGTCTATCAGGAAGAAGGGTGCTCTGCGTCTGTGTaGGGGGATGCTGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: GRQPWSGGTQLQVYQEEGCSASV*GDAVHR
Trigger: CCTGTGAACAGCATCCCCGCACACAGACGCAGAGCA...CCCTTCTTCCTGATAGACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp GCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATGCCAGGGAGGAAGACAGGGGAAATGGGAGCTaGACAGACAGCAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: AAESPSVTPRPHNAREEDRGNGS*TDSKQH
Trigger: ATGCTGCTTGCTGTCTGTGCAGCTCCCATTTCCCCT...GTCTTCCTCCCTGGCATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp TCAATCTCAGGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCTGTCCTCCAGGGTaGCAGTCACTGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SISGWQHKAAESPSVTPRPCPPG*QSLRLW
Trigger: CCAGAGCCTCAGTGACTGCCACCCTGGAGGACAGGG...TCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACCTGAGATTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp AGACCCCACAATGCCAGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCACAGGGTGGCAGTCACTaGGGCTCTGGCCGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RPHNAREEDRFYLRRDLPQGGSH*GSGRWS
Trigger: GGACCAGCGGCCAGAGCCTCAGTGACTGCCACCCTG...TGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCTGGCATTGTGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGCACGTCCTGGTCACTaGCTGGGCCCTCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: DLPSPPLRTFTHFSGTCMARPGH*LGPQLG
Trigger: TCCAAGCTGAGGGCCCAGTCAGTGACCAGGACGTGC...CATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp TCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGGTGTCCCCCACACCTCTaGGGACTAGGACACCCTGGT +
Preference number: 4 (lower is better)
Translates to: SSIPTSADFYSLLRDLHGCPPHL*GLGHPG
Trigger: ACCAGGGTGTCCTAGTCCGCAGAGGTGTGGGGGACA...CCCATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358647.5
CDS-3UTR GCA 90 bp GCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATGCCAGGGAGGAAGACAGACAGCAAGCAGCATaGTCCATAGACCACGAGGAT +
Preference number: 4 (lower is better)
Translates to: AAESPSVTPRPHNAREEDRQQAA*SIDHED
Trigger: ATCCTCGTGGTCTATGGAGCATGCTGCTTGCTGTCT...GTCTTCCTCCCTGGCATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATGCCAGGGAGGAAGACCCTTCAATCTCAGGTTaGCAGCACAAAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: AAESPSVTPRPHNAREEDPSISG*QHKAAE
Trigger: CTCAGCAGCTTTGTGCTGCCAACCTGAGATTGAAGG...GTCTTCCTCCCTGGCATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GCCAGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGTGCTGTTCACAGGGCTaGGGGAGGTTGAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: AREEDRFYLRRDLPSPPLCCSQG*GRLSRR
Trigger: GCGTCTGCTCAACCTCCCTCAGCCCTGTGAACAGCA...CAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp GATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGAGAGAGTCCTGCTCTaGGTCTGTGTGCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: DLPSPPLRTFTHFSGTCMERVLL*VCVRGC
Trigger: GCATCCCCGCACACAGACGCAGAGCAGGACTCTCTC...CATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp TACTCACTTCTCAGGGACCTGCATGGGATCTCAGGCCCATTCCTGAAGCAGTTGCAGCAGAGAGAGTCCTaGTCTGCGTCTGTGTGCGGG +
Preference number: 4 (lower is better)
Translates to: YSLLRDLHGISGPFLKQLQQRES*SASVCG
Trigger: CCCGCACACAGACGCAGAGCAGGACTCTCTCTGCTG...CAACTGCTTCAGGAATGGGCCTGAGATCCCATGCAGGTCCCTGAGAAGTGAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp AGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGCAGTCACTGAGGCTCTaGCCGCTGGTCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: REEDRFYLRRDLPSPPLRQSLRL*PLVLSQ
Trigger: CTGAGAGAGGACCAGCGGCCAGAGCCTCAGTGACTG...CCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGACTCCCTGTCCTCCAGGGTaGCAGTCACTGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EEDRFYLRRDLPSPPLRTPCPPG*QSLRLW
Trigger: CCAGAGCCTCAGTGACTGCCACCCTGGAGGACAGGG...AGTCCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGACTGGGCCCTCAGCTTaGACTCAAACACGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: DLPSPPLRTFTHFSGTCMTGPSA*TQTRAG
Trigger: GCCAGCCCGTGTTTGAGTCCAAGCTGAGGGCCCAGT...CATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp CAGGCAGGCAGCCTTGGAGTGGAGGCACACAGCTCCAAGTCTATCAGGAAGAAGCCAGCTCCAGTTCTTTaGAGCAGCTGGGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: QAGSLGVEAHSSKSIRKKPAPVL*SSWASK
Trigger: CTTGGATGCCCAGCTGCTCCAAAGAACTGGAGCTGG...CTTCTTCCTGATAGACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GCACAGACAGCAAGCAGCATGCTCCATAGACCACGAGGATCTGAGTCTGAATTGTGCTGTTCACAGGGCTaGGGGAGGTTGAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: AQTASSMLHRPRGSESELCCSQG*GRLSRR
Trigger: GCGTCTGCTCAACCTCCCTCAGCCCTGTGAACAGCA...CAATTCAGACTCAGATCCTCGTGGTCTATGGAGCATGCTGCTTGCTGTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp AGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGGGGCTGAAAGCTCCATaGCTCAGCTGGAACCTCCTG +
Preference number: 4 (lower is better)
Translates to: REEDRFYLRRDLPSPPLRGLKAP*LSWNLL
Trigger: CAGGAGGTTCCAGCTGAGTCATGGAGCTTTCAGCCC...CCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498181.6
CDS-3UTR GCA 90 bp TGGGATCTCAGGCCCATTCCTGAAGCAGTTGTTGGCAGACAGAGTGGAATAGTGGAGAGAGTCCTGCTCTaGGTCTGTGTGCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: WDLRPIPEAVVGRQSGIVERVLL*VCVRGC
Trigger: GCATCCCCGCACACAGACGCAGAGCAGGACTCTCTC...CACTATTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp AGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGCAGAAACGGTTGTTGTaGCCTGTCCTCCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: REEDRFYLRRDLPSPPLRQKRLL*PVLQGG
Trigger: GCCACCCTGGAGGACAGGGCACAACAACCGTTTCTG...CCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp GGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATCCAGGTCTTTCAGGCTaGAGTTGTCCGTGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: GWQHKAAESPSVTPRPHNPGLSG*SCPCLL
Trigger: TAGCAAACACGGACAACTGCAGCCTGAAAGACCTGG...ATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp CTGCCTTCAATCTCAGGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGGCTGCTCTGAGGCACTaGCTTCAATCTCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: LPSISGWQHKAAESPSVTAALRH*LQSQVG
Trigger: GCCAACCTGAGATTGAAGGCAGTGCCTCAGAGCAGC...CGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACCTGAGATTGAAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp TCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGGCCCAACTCTCTGTGCTaGTCTGAGGCACTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SSIPTSADFYSLLRDLHGPNSLC*SEALPS
Trigger: TGAAGGCAGTGCCTCAGAGCAGCACAGAGAGTTGGG...CCCATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GCACAGACAGCAAGCAGCATGCTCCATAGACCACGAGGATCTGAGTCTGAATTGCAGTCACTGAGGCTCTaGCCGCTGGTCCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: AQTASSMLHRPRGSESELQSLRL*PLVLSQ
Trigger: CTGAGAGAGGACCAGCGGCCAGAGCCTCAGTGACTG...CAATTCAGACTCAGATCCTCGTGGTCTATGGAGCATGCTGCTTGCTGTCTGTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGCAGGCAGCCTTGGAGTaGAGGCACACAGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: DLPSPPLRTFTHFSGTCMQAALE*RHTAPS
Trigger: ACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTG...CATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGACTGCCATGTGCTGGGGCTaGAAGCTCCATGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: EEDRFYLRRDLPSPPLRTAMCWG*KLHDSA
Trigger: AGCTGAGTCATGGAGCTTTCAGCCCCAGCACATGGC...AGTCCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGACTAGGGCTGAGGGAGGTTaGGCAGACGCAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: EEDRFYLRRDLPSPPLRTRAEGG*ADAVKE
Trigger: CTCCTTAACTGCGTCTGCTCAACCTCCCTCAGCCCT...AGTCCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp TGGGATCTCAGGCCCATTCCTGAAGCAGTTGTTGGCAGACAGAGTGGAATAGTGAGGGCTGAGGGAGGTTaGGCAGACGCAGTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: WDLRPIPEAVVGRQSGIVRAEGG*ADAVKE
Trigger: CTCCTTAACTGCGTCTGCTCAACCTCCCTCAGCCCT...CACTATTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp CAGGCAGGCAGCCTTGGAGTGGAGGCACACAGCTCCAAGTCTATCAGGAAGAAGCCAGGTCTTTCAGGCTaGAGTTGTCCGTGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: QAGSLGVEAHSSKSIRKKPGLSG*SCPCLL
Trigger: TAGCAAACACGGACAACTGCAGCCTGAAAGACCTGG...CTTCTTCCTGATAGACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp GATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGCTGCTCTGAGGCACTaGCTTCAATCTCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: DLPSPPLRTFTHFSGTCMAALRH*LQSQVG
Trigger: GCCAACCTGAGATTGAAGGCAGTGCCTCAGAGCAGC...CATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp TACTCACTTCTCAGGGACCTGCATGGGATCTCAGGCCCATTCCTGAAGCAGTTGCCCAACTCTCTGTGCTaGTCTGAGGCACTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: YSLLRDLHGISGPFLKQLPNSLC*SEALPS
Trigger: TGAAGGCAGTGCCTCAGAGCAGCACAGAGAGTTGGG...CAACTGCTTCAGGAATGGGCCTGAGATCCCATGCAGGTCCCTGAGAAGTGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp AGACCCCACAATGCCAGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCAGGCCCCAACTCTCTGTaGTGCTCTGAGGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: RPHNAREEDRFYLRRDLPGPNSL*CSEALP
Trigger: AGGCAGTGCCTCAGAGCAGCACAGAGAGTTGGGGCC...TGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCTGGCATTGTGGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGCTCAGGAAGGTGAAGTaGCAGCAGAGAGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: DLPSPPLRTFTHFSGTCMLRKVK*QQRESC
Trigger: GCAGGACTCTCTCTGCTGCCACTTCACCTTCCTGAG...CATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp CTAAGGAGAGATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGGTCCTGGTCACTGACTaGGCCCTCAGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: LRRDLPSPPLRTFTHFSGVLVTD*ALSLDS
Trigger: TGAGTCCAAGCTGAGGGCCCAGTCAGTGACCAGGAC...CCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATCTCTCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp TGGGATCTCAGGCCCATTCCTGAAGCAGTTGTTGGCAGACAGAGTGGAATAGTGCAGGCAGCCTTGGAGTaGAGGCACACAGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: WDLRPIPEAVVGRQSGIVQAALE*RHTAPS
Trigger: ACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTG...CACTATTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp TCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGGGGGCTGAAAGCTCCATaGCTCAGCTGCACAAAAAGA +
Preference number: 4 (lower is better)
Translates to: SSIPTSADFYSLLRDLHGGLKAP*LSCTKR
Trigger: TCTTTTTGTGCAGCTGAGTCATGGAGCTTTCAGCCC...CCCATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000358647.5
CDS-3UTR TCA 90 bp GGCAGGCAGCCTTGGAGTGGAGGCACACAGCTCCAAGTCTATCAGGAAGAAGGGAATGACTCCATGGGGTaGTACATTAGAAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRQPWSGGTQLQVYQEEGNDSMG*YIRSAP
Trigger: TGGAGCACTTCTAATGTATCACCCCATGGAGTCATT...CCCTTCTTCCTGATAGACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp AGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGTCTCAGGCCCATTCCTaGAGCAGTTGTTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: REEDRFYLRRDLPSPPLRSQAHS*SSCWQT
Trigger: TGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGA...CCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp GATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGCTCAGCTCTTGCTTGTaGTTCTCCACCTGCCATTCC +
Preference number: 4 (lower is better)
Translates to: DLPSPPLRTFTHFSGTCMLSSCL*FSTCHS
Trigger: GGAATGGCAGGTGGAGAAGCACAAGCAAGAGCTGAG...CATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp TCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGGAGACAGCAAGCAGCATaGTCCATAGACCACGAGGAT +
Preference number: 4 (lower is better)
Translates to: SSIPTSADFYSLLRDLHGRQQAA*SIDHED
Trigger: ATCCTCGTGGTCTATGGAGCATGCTGCTTGCTGTCT...CCCATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp AGACCCCACAATGCCAGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCAGTCCTGGTCACTGACTaGGCCCTCAGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: RPHNAREEDRFYLRRDLPVLVTD*ALSLDS
Trigger: TGAGTCCAAGCTGAGGGCCCAGTCAGTGACCAGGAC...TGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCTGGCATTGTGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp CTGCCTTCAATCTCAGGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGGTTCTTTGGAGCAGCTaGGCATCCAAGAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LPSISGWQHKAAESPSVTVLWSS*ASKKRS
Trigger: TGACCTCTTCTTGGATGCCCAGCTGCTCCAAAGAAC...CGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACCTGAGATTGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GCCAGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGGTCCTTAGCCTGAGCTaGCAATTGTGCGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: AREEDRFYLRRDLPSPPLVLSLS*QLCACL
Trigger: CAAGCATGCGCACAATTGCCAGCTCAGGCTAAGGAC...CAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498181.6
CDS-3UTR GCA 90 bp GAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGACTCTCAGCTCTTGCTTGTaGTTCTCCACCTGCCATTCC +
Preference number: 4 (lower is better)
Translates to: EEDRFYLRRDLPSPPLRTLSSCL*FSTCHS
Trigger: GGAATGGCAGGTGGAGAAGCACAAGCAAGAGCTGAG...AGTCCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp GCACAGACAGCAAGCAGCATGCTCCATAGACCACGAGGATCTGAGTCTGAATTGAGGGGAAATGGGAGCTaGACAGACAGCAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: AQTASSMLHRPRGSESELRGNGS*TDSKQH
Trigger: ATGCTGCTTGCTGTCTGTGCAGCTCCCATTTCCCCT...CAATTCAGACTCAGATCCTCGTGGTCTATGGAGCATGCTGCTTGCTGTCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp TGGGATCTCAGGCCCATTCCTGAAGCAGTTGTTGGCAGACAGAGTGGAATAGTGCGGACTAGGACACCCTaGTGTTGGCTGGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: WDLRPIPEAVVGRQSGIVRTRTP*CWLETD
Trigger: ATCAGTTTCCAGCCAACACCAGGGTGTCCTAGTCCG...CACTATTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358647.5
CDS-3UTR CCA 90 bp GAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGACTGTTCCTGTTTTCACCTaGCACGTCCTGGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: EEDRFYLRRDLPSPPLRTVPVFT*HVLVTD
Trigger: GTCAGTGACCAGGACGTGCCAGGTGAAAACAGGAAC...AGTCCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp TGGGATCTCAGGCCCATTCCTGAAGCAGTTGTTGGCAGACAGAGTGGAATAGTGGTTCCTGTTTTCACCTaGCACGTCCTGGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: WDLRPIPEAVVGRQSGIVVPVFT*HVLVTD
Trigger: GTCAGTGACCAGGACGTGCCAGGTGAAAACAGGAAC...CACTATTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp AGACCCCACAATGCCAGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCACCAGCTCCAGTTCTTTaGAGCAGCTGGGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: RPHNAREEDRFYLRRDLPPAPVL*SSWASK
Trigger: CTTGGATGCCCAGCTGCTCCAAAGAACTGGAGCTGG...TGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCTGGCATTGTGGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GAATTGGTGATTATTAGAACAATGACTCCATGGGGTGATACATTAGAAGTGCTCCAGGGTGGCAGTCACTaGGGCTCTGGCCGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ELVIIRTMTPWGDTLEVLQGGSH*GSGRWS
Trigger: GGACCAGCGGCCAGAGCCTCAGTGACTGCCACCCTG...GAGCACTTCTAATGTATCACCCCATGGAGTCATTGTTCTAATAATCACCAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GGCAGGCAGCCTTGGAGTGGAGGCACACAGCTCCAAGTCTATCAGGAAGAAGGGAGACAAGTTATCTTCTaGTCTACCTTCAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: GRQPWSGGTQLQVYQEEGRQVIF*STFSHS
Trigger: ACTATGGCTGAAGGTAGATCAGAAGATAACTTGTCT...CCCTTCTTCCTGATAGACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp AGACCCCACAATGCCAGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCTCAGGCCCATTCCTaGAGCAGTTGTTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: RPHNAREEDRFYLRRDLPSQAHS*SSCWQT
Trigger: TGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGA...TGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCTGGCATTGTGGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGTTCTTGTACAGCTCTTaGGTATCGGCCTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: DLPSPPLRTFTHFSGTCMFLYSS*VSACDS
Trigger: TGAGTCACAGGCCGATACCCAAGAGCTGTACAAGAA...CATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp TGGGATCTCAGGCCCATTCCTGAAGCAGTTGTTGGCAGACAGAGTGGAATAGTGCCTTCAATCTCAGGTTaGCAGCACAAAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: WDLRPIPEAVVGRQSGIVPSISG*QHKAAE
Trigger: CTCAGCAGCTTTGTGCTGCCAACCTGAGATTGAAGG...CACTATTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GCACAGACAGCAAGCAGCATGCTCCATAGACCACGAGGATCTGAGTCTGAATTGTTCTTGTACAGCTCTTaGGTATCGGCCTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: AQTASSMLHRPRGSESELFLYSS*VSACDS
Trigger: TGAGTCACAGGCCGATACCCAAGAGCTGTACAAGAA...CAATTCAGACTCAGATCCTCGTGGTCTATGGAGCATGCTGCTTGCTGTCTGTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGACTAATCCTCAATGCCGGTaGTGTTGCAGACAAGTTATC +
Preference number: 4 (lower is better)
Translates to: EEDRFYLRRDLPSPPLRTNPQCR*CCRQVI
Trigger: GATAACTTGTCTGCAACACCACCGGCATTGAGGATT...AGTCCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GAGTCTGAATTGGTGATTATTAGAACAATGACTCCATGGGGTGATACATTAGAAGCAGGCAGGCAGCCTTaGAGTGGAGGCACACAGCTC +
Preference number: 4 (lower is better)
Translates to: ESELVIIRTMTPWGDTLEAGRQP*SGGTQL
Trigger: GAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCCTGC...TTCTAATGTATCACCCCATGGAGTCATTGTTCTAATAATCACCAATTCAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGACTAGACAAGTTATCTTCTaGTCTACCTTCAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: EEDRFYLRRDLPSPPLRTRQVIF*STFSHS
Trigger: ACTATGGCTGAAGGTAGATCAGAAGATAACTTGTCT...AGTCCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR GCA 90 bp GAATTGGTGATTATTAGAACAATGACTCCATGGGGTGATACATTAGAAGTGCTCCAGAAACGGTTGTTGTaGCCTGTCCTCCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ELVIIRTMTPWGDTLEVLQKRLL*PVLQGG
Trigger: GCCACCCTGGAGGACAGGGCACAACAACCGTTTCTG...GAGCACTTCTAATGTATCACCCCATGGAGTCATTGTTCTAATAATCACCAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GAGTCTGAATTGGTGATTATTAGAACAATGACTCCATGGGGTGATACATTAGAAACTGGGCCCTCAGCTTaGACTCAAACACGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ESELVIIRTMTPWGDTLETGPSA*TQTRAG
Trigger: GCCAGCCCGTGTTTGAGTCCAAGCTGAGGGCCCAGT...TTCTAATGTATCACCCCATGGAGTCATTGTTCTAATAATCACCAATTCAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GAGTCTGAATTGGTGATTATTAGAACAATGACTCCATGGGGTGATACATTAGAATTGGGTATCGGCCTGTaGCTCAAAGATGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: ESELVIIRTMTPWGDTLELGIGL*LKDGGR
Trigger: ACGCCCTCCATCTTTGAGTCACAGGCCGATACCCAA...TTCTAATGTATCACCCCATGGAGTCATTGTTCTAATAATCACCAATTCAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
3UTR CAA 72 bp AGCATGCTCCATAGACCACGAGGATCTGAGTCTGAATaGGTGATTATTAGAACAATGACTCCATGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: SMLHRPRGSESE*VIIRTMTPWGD
Trigger: ATCACCCCATGGAGTCATTGTTCTAATAATCACCAATTCAGACTCAGATCCTCGTGGTCTATGGAGCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GAATTGGTGATTATTAGAACAATGACTCCATGGGGTGATACATTAGAAGTGCTCGTTCTTTGGAGCAGCTaGGCATCCAAGAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ELVIIRTMTPWGDTLEVLVLWSS*ASKKRS
Trigger: TGACCTCTTCTTGGATGCCCAGCTGCTCCAAAGAAC...GAGCACTTCTAATGTATCACCCCATGGAGTCATTGTTCTAATAATCACCAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR TCA 90 bp GAGTCTGAATTGGTGATTATTAGAACAATGACTCCATGGGGTGATACATTAGAAAATGACTCCATGGGGTaGTACATTAGAAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ESELVIIRTMTPWGDTLENDSMG*YIRSAP
Trigger: TGGAGCACTTCTAATGTATCACCCCATGGAGTCATT...TTCTAATGTATCACCCCATGGAGTCATTGTTCTAATAATCACCAATTCAGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CCA 90 bp GAGTCTGAATTGGTGATTATTAGAACAATGACTCCATGGGGTGATACATTAGAAAATCCTCAATGCCGGTaGTGTTGCAGACAAGTTATC +
Preference number: 4 (lower is better)
Translates to: ESELVIIRTMTPWGDTLENPQCR*CCRQVI
Trigger: GATAACTTGTCTGCAACACCACCGGCATTGAGGATT...TTCTAATGTATCACCCCATGGAGTCATTGTTCTAATAATCACCAATTCAGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS GCA 90 bp GGCAATGGGGCAGCAAAGCCCGCTGTCCTGGGACTGGGCTGTGAGTaGAGGCACAGATTCTTCAGGCTGTGCTCCACCAGCTGTGCACCT +
Preference number: 5 (lower is better)
Translates to: GNGAAKPAVLGLGCE*RHRFFRLCSTSCAP
Trigger: AGGTGCACAGCTGGTGGAGCACAGCCTGAAGAATCTGTGCCTGCACTCACAGCCCAGTCCCAGGACAGCGGGCTTTGCTGCCCCATTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS TCA 90 bp CTCCAGAAACGGTTGTTGTGCCCTGTCCTCCAGGGTGGCAGTCACTaGGGCTCTGGCCGCTGGTCCTCTCTCAGGAAGGTGAAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LQKRLLCPVLQGGSH*GSGRWSSLRKVKWQ
Trigger: CTGCCACTTCACCTTCCTGAGAGAGGACCAGCGGCCAGAGCCTCAGTGACTGCCACCCTGGAGGACAGGGCACAACAACCGTTTCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS GCA 90 bp CGCTGGTCCTCTCTCAGGAAGGTGAAGTGGCAGCAGAGAGAGTCCTaGTCTGCGTCTGTGTGCGGGGATGCTGTTCACAGGGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: RWSSLRKVKWQQRES*SASVCGDAVHRAEG
Trigger: TCCCTCAGCCCTGTGAACAGCATCCCCGCACACAGACGCAGAGCAGGACTCTCTCTGCTGCCACTTCACCTTCCTGAGAGAGGACCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS CCA 90 bp ACGGTTGTTGTGCCCTGTCCTCCAGGGTGGCAGTCACTGAGGCTCTaGCCGCTGGTCCTCTCTCAGGAAGGTGAAGTGGCAGCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: TVVVPCPPGWQSLRL*PLVLSQEGEVAAER
Trigger: TCTCTCTGCTGCCACTTCACCTTCCTGAGAGAGGACCAGCGGCCAGAGCCTCAGTGACTGCCACCCTGGAGGACAGGGCACAACAACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358647.5
ENST00000476324.1
ENST00000479556.1
ENST00000498181.6
CDS TCA 90 bp TCTGCGTCTGTGTGCGGGGATGCTGTTCACAGGGCTGAGGGAGGTTaGGCAGACGCAGTTAAGGAGGAGCCATGTGCTGGGGCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: SASVCGDAVHRAEGG*ADAVKEEPCAGAES
Trigger: GCTTTCAGCCCCAGCACATGGCTCCTCCTTAACTGCGTCTGCTCAACCTCCCTCAGCCCTGTGAACAGCATCCCCGCACACAGACGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS TCA 90 bp CTTCAGAAACGGTTGTTGTGCCCTGTCCTCCAGGGTGGCAGTCACTaGGGCTCTGGCCGCTGGTCCTCTCTCAGGAAGGTGAAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LQKRLLCPVLQGGSH*GSGRWSSLRKVKWQ
Trigger: CTGCCACTTCACCTTCCTGAGAGAGGACCAGCGGCCAGAGCCTCAGTGACTGCCACCCTGGAGGACAGGGCACAACAACCGTTTCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479556.1
CDS TCA 90 bp TACCAGAAACGGTTGTTGTGCCCTGTCCTCCAGGGTGGCAGTCACTaGGGCTCTGGCCGCTGGTCCTCTCTCAGGAAGGTGAAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: YQKRLLCPVLQGGSH*GSGRWSSLRKVKWQ
Trigger: CTGCCACTTCACCTTCCTGAGAGAGGACCAGCGGCCAGAGCCTCAGTGACTGCCACCCTGGAGGACAGGGCACAACAACCGTTTCTGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS GCA 90 bp GTCCTGGGACTGGGCTGTGAGTGCAGGCACAGATTCTTCAGGCTGTaGTCCACCAGCTGTGCACCTGCTGATGCCCGCAACACTCATCAC +
Preference number: 5 (lower is better)
Translates to: VLGLGCECRHRFFRL*STSCAPADARNTHH
Trigger: GTGATGAGTGTTGCGGGCATCAGCAGGTGCACAGCTGGTGGAGCACAGCCTGAAGAATCTGTGCCTGCACTCACAGCCCAGTCCCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CCA 90 bp CTCCCATTCTCTCCAGAAACGGTTGTTGTGCCCTGTCCTCCAGGGTaGCAGTCACTGAGGCTCTGGCCGCTGGTCCTCTCTCAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: LPFSPETVVVPCPPG*QSLRLWPLVLSQEG
Trigger: ACCTTCCTGAGAGAGGACCAGCGGCCAGAGCCTCAGTGACTGCCACCCTGGAGGACAGGGCACAACAACCGTTTCTGGAGAGAATGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358647.5
ENST00000466347.5
ENST00000498181.6
CDS CCA 90 bp CAGTTCTCCTTACCAGAAACGGTTGTTGTGCCCTGTCCTCCAGGGTaGCAGTCACTGAGGCTCTGGCCGCTGGTCCTCTCTCAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: QFSLPETVVVPCPPG*QSLRLWPLVLSQEG
Trigger: ACCTTCCTGAGAGAGGACCAGCGGCCAGAGCCTCAGTGACTGCCACCCTGGAGGACAGGGCACAACAACCGTTTCTGGTAAGGAGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS-3UTR CAA 90 bp TCAATCTCAGGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGAGACTGGGCCCTCAGCTaGGACTCAAACACGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SISGWQHKAAESPSVTPRDWALS*DSNTGW
Trigger: CCAGCCCGTGTTTGAGTCCAAGCTGAGGGCCCAGTC...TCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACCTGAGATTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS GCA 90 bp ACTCAGCTGGAACCTCCTGCAGTCCTTAGCCTGAGCTGGCAATTGTaGGCATGCTTGCAGACCCCTTCTTCCCAACGTGTGCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: TQLEPPAVLSLSWQL*ACLQTPSSQRVLGK
Trigger: CTTCCCCAGCACACGTTGGGAAGAAGGGGTCTGCAAGCATGCGCACAATTGCCAGCTCAGGCTAAGGACTGCAGGAGGTTCCAGCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498181.6
CDS-3UTR CAA 90 bp GCCAGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGGACTGGGCCCTCAGCTaGGACTCAAACACGGGCTGG +
Preference number: 5 (lower is better)
Translates to: AREEDRFYLRRDLPSPPLDWALS*DSNTGW
Trigger: CCAGCCCGTGTTTGAGTCCAAGCTGAGGGCCCAGTC...CAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CAA 90 bp TACTCACTTCTCAGGGACCTGCATGGGATCTCAGGCCCATTCCTGAAGCAGTTGAGCAGGCAGGCAGCCTaGGAGTGGAGGCACACAGCT +
Preference number: 5 (lower is better)
Translates to: YSLLRDLHGISGPFLKQLSRQAA*EWRHTA
Trigger: AGCTGTGTGCCTCCACTCCAAGGCTGCCTGCCTGCT...CAACTGCTTCAGGAATGGGCCTGAGATCCCATGCAGGTCCCTGAGAAGTGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS TCA 90 bp CAGGCACAGATTCTTCAGGCTGTGCTCCACCAGCTGTGCACCTGCTaGTGCCCGCAACACTCATCACCATTGCCCCGTTTTACTGACCAG +
Preference number: 5 (lower is better)
Translates to: QAQILQAVLHQLCTC*CPQHSSPLPRFTDQ
Trigger: CTGGTCAGTAAAACGGGGCAATGGTGATGAGTGTTGCGGGCATCAGCAGGTGCACAGCTGGTGGAGCACAGCCTGAAGAATCTGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS GCA 90 bp TCCACCAGCTGTGCACCTGCTGATGCCCGCAACACTCATCACCATTaGCCCGTTTTACTGACCAGCGAACCCAGAAGTGAGGGGATCTGT +
Preference number: 5 (lower is better)
Translates to: STSCAPADARNTHHH*PVLLTSEPRSEGIC
Trigger: ACAGATCCCCTCACTTCTGGGTTCGCTGGTCAGTAAAACGGGGCAATGGTGATGAGTGTTGCGGGCATCAGCAGGTGCACAGCTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CCA 90 bp GACAAGTTATCTTCAGAAACGGTTGTTGTGCCCTGTCCTCCAGGGTaGCAGTCACTGAGGCTCTGGCCGCTGGTCCTCTCTCAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: DKLSSETVVVPCPPG*QSLRLWPLVLSQEG
Trigger: ACCTTCCTGAGAGAGGACCAGCGGCCAGAGCCTCAGTGACTGCCACCCTGGAGGACAGGGCACAACAACCGTTTCTGAAGATAACTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479556.1
CDS CCA 90 bp AGCTCCATGACTCAGCTGGAACCTCCTGCAGTCCTTAGCCTGAGCTaGCAATTGTGCGCATGCTTGCAGACCCCTTCTTCCCAACGTGTG +
Preference number: 5 (lower is better)
Translates to: SSMTQLEPPAVLSLS*QLCACLQTPSSQRV
Trigger: CACACGTTGGGAAGAAGGGGTCTGCAAGCATGCGCACAATTGCCAGCTCAGGCTAAGGACTGCAGGAGGTTCCAGCTGAGTCATGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498181.6
CDS-3UTR CAA 90 bp GGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATGCCATAGTTCCATATTaGCCCCTCTGGAATCCTCCC +
Preference number: 5 (lower is better)
Translates to: GWQHKAAESPSVTPRPHNAIVPY*PLWNPP
Trigger: GGGAGGATTCCAGAGGGGCAAATATGGAACTATGGC...ATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CAA 90 bp GGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGACCCCACAATTTCCCGCAGCCTGTTTaGCCCACTAGGATAATCCTC +
Preference number: 5 (lower is better)
Translates to: GWQHKAAESPSVTPRPHNFPQPV*PTRIIL
Trigger: GAGGATTATCCTAGTGGGCAAAACAGGCTGCGGGAA...ATTGTGGGGTCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CAA 90 bp GGCAGGCAGCCTTGGAGTGGAGGCACACAGCTCCAAGTCTATCAGGAAGAAGGGTCCACAGAGCCCCAGTaGTTGAAGGCACAGTACCTT +
Preference number: 5 (lower is better)
Translates to: GRQPWSGGTQLQVYQEEGSTEPQ*LKAQYL
Trigger: AAGGTACTGTGCCTTCAACAACTGGGGCTCTGTGGA...CCCTTCTTCCTGATAGACTTGGAGCTGTGTGCCTCCACTCCAAGGCTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CAA 90 bp TGGGATCTCAGGCCCATTCCTGAAGCAGTTGTTGGCAGACAGAGTGGAATAGTGAGCAGGCAGGCAGCCTaGGAGTGGAGGCACACAGCT +
Preference number: 5 (lower is better)
Translates to: WDLRPIPEAVVGRQSGIVSRQAA*EWRHTA
Trigger: AGCTGTGTGCCTCCACTCCAAGGCTGCCTGCCTGCT...CACTATTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGGGCCTGAGATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS TCA 90 bp ACACGAAGAACTGACGTGAGAGGAAATGGTATAGGGGGACCGGTATaGCCGCTTTCCCACCCTGACGGTTGGTGGAGAGGAGGTAGTGAG +
Preference number: 5 (lower is better)
Translates to: TRRTDVRGNGIGGPV*PLSHPDGWWRGGSE
Trigger: CTCACTACCTCCTCTCCACCAACCGTCAGGGTGGGAAAGCGGTCATACCGGTCCCCCTATACCATTTCCTCTCACGTCAGTTCTTCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000469272.1
ENST00000476324.1
ENST00000493304.2
CDS TCA 90 bp CTGTCCAGTGGGAGGATGGAAGTGGGGATCAGGGACACGAAGAACTaGCGTGAGAGGAAATGGTATAGGGGGACCGGTATGACCGCTTTC +
Preference number: 5 (lower is better)
Translates to: LSSGRMEVGIRDTKN*RERKWYRGTGMTAF
Trigger: GAAAGCGGTCATACCGGTCCCCCTATACCATTTCCTCTCACGTCAGTTCTTCGTGTCCCTGATCCCCACTTCCATCCTCCCACTGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469272.1
ENST00000476324.1
ENST00000493304.2
CDS CCA 90 bp TGGAACATGAGGCTCCTGGGGTGGGAAAATATCCCACATTTGCCCTaGGGAGCCCTAAGAATCCATCCTCAGCTCCCAGGCTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: WNMRLLGWENIPHLP*GALRIHPQLPGLSE
Trigger: CTCAGACAAGCCTGGGAGCTGAGGATGGATTCTTAGGGCTCCCCAGGGCAAATGTGGGATATTTTCCCACCCCAGGAGCCTCATGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS-3UTR CAA 90 bp GATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGCCCAGCTCCAGTTCTTaGGAGCAGCTGGGCATCCAA +
Preference number: 5 (lower is better)
Translates to: DLPSPPLRTFTHFSGTCMPSSSS*EQLGIQ
Trigger: TTGGATGCCCAGCTGCTCCAAAGAACTGGAGCTGGG...CATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CAA 90 bp GCCAGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCCCAGCTCCAGTTCTTaGGAGCAGCTGGGCATCCAA +
Preference number: 5 (lower is better)
Translates to: AREEDRFYLRRDLPSPPLPSSSS*EQLGIQ
Trigger: TTGGATGCCCAGCTGCTCCAAAGAACTGGAGCTGGG...CAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS CCA 90 bp GGATCAGTTCAGCCTTACTCCCTGAGAGTTTCATGGAGATCGACTTaGCTAAGTAATGGGCAATGGGGCAGCAAAGCCCGCTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GSVQPYSLRVSWRST*LSNGQWGSKARCPG
Trigger: CCCAGGACAGCGGGCTTTGCTGCCCCATTGCCCATTACTTAGCCAAGTCGATCTCCATGAAACTCTCAGGGAGTAAGGCTGAACTGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS-3UTR CAA 90 bp TACTCACTTCTCAGGGACCTGCATGGGATCTCAGGCCCATTCCTGAAGCAGTTGTCTCTCCAGAAACGGTaGTTGTGCCCTGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: YSLLRDLHGISGPFLKQLSLQKR*LCPVLQ
Trigger: CTGGAGGACAGGGCACAACAACCGTTTCTGGAGAGA...CAACTGCTTCAGGAATGGGCCTGAGATCCCATGCAGGTCCCTGAGAAGTGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CAA 90 bp TCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGGGCCATAGTTCCATATTaGCCCCTCTGGAATCCTCCC +
Preference number: 5 (lower is better)
Translates to: SSIPTSADFYSLLRDLHGAIVPY*PLWNPP
Trigger: GGGAGGATTCCAGAGGGGCAAATATGGAACTATGGC...CCCATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS CCA 90 bp TCCAGCGGCGGAGAGGAAATTACAAGGTACTGTCCAGTGGGAGGATaGAAGTGGGGATCAGGGACACGAAGAACTGACGTGAGAGGAAAT +
Preference number: 5 (lower is better)
Translates to: SSGGEEITRYCPVGG*KWGSGTRRTDVRGN
Trigger: ATTTCCTCTCACGTCAGTTCTTCGTGTCCCTGATCCCCACTTCCATCCTCCCACTGGACAGTACCTTGTAATTTCCTCTCCGCCGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469272.1
ENST00000476324.1
ENST00000493304.2
CDS CCA 90 bp GTATCTCCTTCACCCATCTGCCCCAGCCCATGTATTTCCAGGTATTaGAATCATGTGTTTTGCGGTTTGGTGTGCGTCCGGCAGGGTGTC +
Preference number: 5 (lower is better)
Translates to: VSPSPICPSPCISRY*NHVFCGLVCVRQGV
Trigger: GACACCCTGCCGGACGCACACCAAACCGCAAAACACATGATTCCAATACCTGGAAATACATGGGCTGGGGCAGATGGGTGAAGGAGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS-3UTR CAA 90 bp GCACAGACAGCAAGCAGCATGCTCCATAGACCACGAGGATCTGAGTCTGAATTGTCTCTCCAGAAACGGTaGTTGTGCCCTGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: AQTASSMLHRPRGSESELSLQKR*LCPVLQ
Trigger: CTGGAGGACAGGGCACAACAACCGTTTCTGGAGAGA...CAATTCAGACTCAGATCCTCGTGGTCTATGGAGCATGCTGCTTGCTGTCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CAA 90 bp TCAATCTCAGGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGACCATTCCTGAAGCAGTaGTTGGCAGACAGAGTGGAA +
Preference number: 5 (lower is better)
Translates to: SISGWQHKAAESPSVTPRPFLKQ*LADRVE
Trigger: TTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGG...TCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACCTGAGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS CCA 90 bp TGCAAGCAAGACAGTAGCAGCCTCTGGCAAGCTGGTGGGAGGGTCTaGCTCAGGGAAAAGGGTGAAGCAAATGAACAAAATGCACATTCC +
Preference number: 5 (lower is better)
Translates to: CKQDSSSLWQAGGRV*LREKGEANEQNAHS
Trigger: GGAATGTGCATTTTGTTCATTTGCTTCACCCTTTTCCCTGAGCCAGACCCTCCCACCAGCTTGCCAGAGGCTGCTACTGTCTTGCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS-3UTR CAA 90 bp GAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGCGGACTTCCACAGAGCCCCAGTaGTTGAAGGCACAGTACCTT +
Preference number: 5 (lower is better)
Translates to: EEDRFYLRRDLPSPPLRTSTEPQ*LKAQYL
Trigger: AAGGTACTGTGCCTTCAACAACTGGGGCTCTGTGGA...AGTCCGCAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CAA 90 bp TCAATCTCAGGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCACGCCCAGAAAAAGCATCAAGTGTTaGACTCTGAGGAGCGCCTTG +
Preference number: 5 (lower is better)
Translates to: SISGWQHKAAESPSVTPRKSIKC*TLRSAL
Trigger: CAAGGCGCTCCTCAGAGTCAAACACTTGATGCTTTT...TCTGGGCGTGACACTGGGACTCTCAGCAGCTTTGTGCTGCCAACCTGAGATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS-3UTR CAA 90 bp TACTCACTTCTCAGGGACCTGCATGGGATCTCAGGCCCATTCCTGAAGCAGTTGCCATTCCTGAAGCAGTaGTTGGCAGACAGAGTGGAA +
Preference number: 5 (lower is better)
Translates to: YSLLRDLHGISGPFLKQLPFLKQ*LADRVE
Trigger: TTCCACTCTGTCTGCCAACAACTGCTTCAGGAATGG...CAACTGCTTCAGGAATGGGCCTGAGATCCCATGCAGGTCCCTGAGAAGTGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS GCA 90 bp TCTGGATGCCTTTGCCTTCTGTCTTTTGGCACCTCCTCCTCAGAATaGAGTTTTTATACCCTCACTCTTCACCCGCTCTCACAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: SGCLCLLSFGTSSSE*SFYTLTLHPLSQAE
Trigger: CTCAGCCTGTGAGAGCGGGTGAAGAGTGAGGGTATAAAAACTGCATTCTGAGGAGGAGGTGCCAAAAGACAGAAGGCAAAGGCATCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466347.5
CDS GCA 90 bp CTGCATGCTTCATTGTGCCAGGGTGCCAGTGCCTCTGGATGCCTTTaGCTTCTGTCTTTTGGCACCTCCTCCTCAGAATGCAGTTTTTAT +
Preference number: 5 (lower is better)
Translates to: LHASLCQGASASGCL*LLSFGTSSSECSFY
Trigger: ATAAAAACTGCATTCTGAGGAGGAGGTGCCAAAAGACAGAAGGCAAAGGCATCCAGAGGCACTGGCACCCTGGCACAATGAAGCATGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466347.5
CDS CCA 90 bp CCACTGATGAGAGGATCAGTTCAGCCTTACTCCCTGAGAGTTTCATaGAGATCGACTTGGCTAAGTAATGGGCAATGGGGCAGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: PLMRGSVQPYSLRVS*RSTWLSNGQWGSKA
Trigger: GGCTTTGCTGCCCCATTGCCCATTACTTAGCCAAGTCGATCTCCATGAAACTCTCAGGGAGTAAGGCTGAACTGATCCTCTCATCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS-3UTR CAA 90 bp GCCAGGGAGGAAGACAGGTTCTATCTAAGGAGAGATCTTCCATCCCCACCTCTGAAAAGCATCAAGTGTTaGACTCTGAGGAGCGCCTTG +
Preference number: 5 (lower is better)
Translates to: AREEDRFYLRRDLPSPPLKSIKC*TLRSAL
Trigger: CAAGGCGCTCCTCAGAGTCAAACACTTGATGCTTTT...CAGAGGTGGGGATGGAAGATCTCTCCTTAGATAGAACCTGTCTTCCTCCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS TCA 90 bp GAACTGAATAGAGCGTGGTGGACACACCGTAGGCTTGAAGGAATGTaGTACGTGTTGGTCTACAGGGCAGACAAAAGTGGAGGAATTGAG +
Preference number: 5 (lower is better)
Translates to: ELNRAWWTHRRLEGM*YVLVYRADKSGGIE
Trigger: CTCAATTCCTCCACTTTTGTCTGCCCTGTAGACCAACACGTATCACATTCCTTCAAGCCTACGGTGTGTCCACCACGCTCTATTCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS-3UTR CAA 90 bp GATCTTCCATCCCCACCTCTGCGGACTTTTACTCACTTCTCAGGGACCTGCATGGGATCTGAGTCTGAATaGGTGATTATTAGAACAATG +
Preference number: 5 (lower is better)
Translates to: DLPSPPLRTFTHFSGTCMGSESE*VIIRTM
Trigger: CATTGTTCTAATAATCACCAATTCAGACTCAGATCC...CATGCAGGTCCCTGAGAAGTGAGTAAAAGTCCGCAGAGGTGGGGATGGAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS TCA 90 bp GAAGTGAGGGGATCTGTGCAAGGTCATGTCAGAAATGAACAGCTGTaGCCAAACTGTGATCCTTTCAATTCCCAAAGTCTCTGTGAGCAT +
Preference number: 5 (lower is better)
Translates to: EVRGSVQGHVRNEQL*PNCDPFNSQSLCEH
Trigger: ATGCTCACAGAGACTTTGGGAATTGAAAGGATCACAGTTTGGTCACAGCTGTTCATTTCTGACATGACCTTGCACAGATCCCCTCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS GCA 90 bp CGAATTCAAGAACAACTCATTGCCTGCTCCGGGTTTCCAGCATTGTaGAACAGTATTGGGGATGTACATTTTCCACGTGACTGGTTATTG +
Preference number: 5 (lower is better)
Translates to: RIQEQLIACSGFPAL*NSIGDVHFPRDWLL
Trigger: CAATAACCAGTCACGTGGAAAATGTACATCCCCAATACTGTTGCACAATGCTGGAAACCCGGAGCAGGCAATGAGTTGTTCTTGAATTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469272.1
ENST00000476324.1
CDS GCA 90 bp GAGAAAGAATCAACTTCAGGCCGAATTCAAGAACAACTCATTGCCTaGTCCGGGTTTCCAGCATTGTGCAACAGTATTGGGGATGTACAT +
Preference number: 5 (lower is better)
Translates to: EKESTSGRIQEQLIA*SGFPALCNSIGDVH
Trigger: ATGTACATCCCCAATACTGTTGCACAATGCTGGAAACCCGGAGCAGGCAATGAGTTGTTCTTGAATTCGGCCTGAAGTTGATTCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469272.1
ENST00000476324.1
CDS CCA 90 bp AAGTCAACAAACCTCTTGGAACATGTGTACAATGCTGCCACTCCCTaGTCAGGAGACAAATTAATTGGACAGCTAGAAGCCTACCCTAAA +
Preference number: 5 (lower is better)
Translates to: KSTNLLEHVYNAATP*SGDKLIGQLEAYPK
Trigger: TTTAGGGTAGGCTTCTAGCTGTCCAATTAATTTGTCTCCTGACCAGGGAGTGGCAGCATTGTACACATGTTCCAAGAGGTTTGTTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CCA 90 bp ACCTGCCAAAGGTCACATATTTACAATGGAGCTAGCATCAGGAAATaGCTCCTTTTGCTGTGTATTGTCCTTGATTCCACAGGTGGAAAA +
Preference number: 5 (lower is better)
Translates to: TCQRSHIYNGASIRK*LLLLCIVLDSTGGK
Trigger: TTTTCCACCTGTGGAATCAAGGACAATACACAGCAAAAGGAGCCATTTCCTGATGCTAGCTCCATTGTAAATATGTGACCTTTGGCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS GCA 90 bp GGTCACATATTTACAATGGAGCTAGCATCAGGAAATGGCTCCTTTTaGTGTGTATTGTCCTTGATTCCACAGGTGGAAAAAGAGACTTTT +
Preference number: 5 (lower is better)
Translates to: GHIFTMELASGNGSF*CVLSLIPQVEKETF
Trigger: AAAAGTCTCTTTTTCCACCTGTGGAATCAAGGACAATACACAGCAAAAGGAGCCATTTCCTGATGCTAGCTCCATTGTAAATATGTGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CCA 72 bp GTGCCCTGTCCTCCAGGGTGGCAGTCACTGAGGCTCTaGCCGCTGGTCCTCTCTCAGGAAGGTGAAGTGGCA +
Preference number: 6 (lower is better)
Translates to: VPCPPGWQSLRL*PLVLSQEGEVA
Trigger: TGCCACTTCACCTTCCTGAGAGAGGACCAGCGGCCAGAGCCTCAGTGACTGCCACCCTGGAGGACAGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358647.5
ENST00000476324.1
ENST00000479556.1
ENST00000498181.6
CDS GCA 72 bp CTGGGCTGTGAGTGCAGGCACAGATTCTTCAGGCTGTaGTCCACCAGCTGTGCACCTGCTGATGCCCGCAAC +
Preference number: 6 (lower is better)
Translates to: LGCECRHRFFRL*STSCAPADARN
Trigger: GTTGCGGGCATCAGCAGGTGCACAGCTGGTGGAGCACAGCCTGAAGAATCTGTGCCTGCACTCACAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CCA 72 bp TGGGCAATGGGGCAGCAAAGCCCGCTGTCCTGGGACTaGGCTGTGAGTGCAGGCACAGATTCTTCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: WAMGQQSPLSWD*AVSAGTDSSGC
Trigger: ACAGCCTGAAGAATCTGTGCCTGCACTCACAGCCCAGTCCCAGGACAGCGGGCTTTGCTGCCCCATTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CCA 72 bp GTTCCTGTTTTCACCTGGCACGTCCTGGTCACTGACTaGGCCCTCAGCTTGGACTCAAACACGGGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: VPVFTWHVLVTD*ALSLDSNTGWP
Trigger: TGGCCAGCCCGTGTTTGAGTCCAAGCTGAGGGCCCAGTCAGTGACCAGGACGTGCCAGGTGAAAACAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358647.5
ENST00000476324.1
ENST00000479556.1
ENST00000493304.2
ENST00000498181.6
CDS CAA 90 bp ATGACTCAGCTGGAACCTCCTGCAGTCCTTAGCCTGAGCTGGCAATaGTGCGCATGCTTGCAGACCCCTTCTTCCCAACGTGTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: MTQLEPPAVLSLSWQ*CACLQTPSSQRVLG
Trigger: CCCCAGCACACGTTGGGAAGAAGGGGTCTGCAAGCATGCGCACAATTGCCAGCTCAGGCTAAGGACTGCAGGAGGTTCCAGCTGAGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498181.6
CDS CCA 72 bp TGGAAGGCAGTGTGCAAGCAAGACAGTAGCAGCCTCTaGCAAGCTGGTGGGAGGGTCTGGCTCAGGGAAAAG +
Preference number: 6 (lower is better)
Translates to: WKAVCKQDSSSL*QAGGRVWLREK
Trigger: CTTTTCCCTGAGCCAGACCCTCCCACCAGCTTGCCAGAGGCTGCTACTGTCTTGCTTGCACACTGCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS TCA 72 bp ACTGACGTGAGAGGAAATGGTATAGGGGGACCGGTATaGCCGCTTTCCCACCCTGACGGTTGGTGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: TDVRGNGIGGPV*PLSHPDGWWRG
Trigger: TCCTCTCCACCAACCGTCAGGGTGGGAAAGCGGTCATACCGGTCCCCCTATACCATTTCCTCTCACGTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000469272.1
ENST00000476324.1
ENST00000493304.2
CDS CCA 72 bp ACTCAGCTGGAACCTCCTGCAGTCCTTAGCCTGAGCTaGCAATTGTGCGCATGCTTGCAGACCCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: TQLEPPAVLSLS*QLCACLQTPSS
Trigger: GGAAGAAGGGGTCTGCAAGCATGCGCACAATTGCCAGCTCAGGCTAAGGACTGCAGGAGGTTCCAGCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498181.6
CDS TCA 72 bp GGGAGGATGGAAGTGGGGATCAGGGACACGAAGAACTaGCGTGAGAGGAAATGGTATAGGGGGACCGGTATG +
Preference number: 6 (lower is better)
Translates to: GRMEVGIRDTKN*RERKWYRGTGM
Trigger: CATACCGGTCCCCCTATACCATTTCCTCTCACGTCAGTTCTTCGTGTCCCTGATCCCCACTTCCATCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469272.1
ENST00000476324.1
ENST00000493304.2
CDS TCA 72 bp ATTCTTCAGGCTGTGCTCCACCAGCTGTGCACCTGCTaGTGCCCGCAACACTCATCACCATTGCCCCGTTTT +
Preference number: 6 (lower is better)
Translates to: ILQAVLHQLCTC*CPQHSSPLPRF
Trigger: AAAACGGGGCAATGGTGATGAGTGTTGCGGGCATCAGCAGGTGCACAGCTGGTGGAGCACAGCCTGAAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS GCA 72 bp TGTGCACCTGCTGATGCCCGCAACACTCATCACCATTaGCCCGTTTTACTGACCAGCGAACCCAGAAGTGAG +
Preference number: 6 (lower is better)
Translates to: CAPADARNTHHH*PVLLTSEPRSE
Trigger: CTCACTTCTGGGTTCGCTGGTCAGTAAAACGGGGCAATGGTGATGAGTGTTGCGGGCATCAGCAGGTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CCA 72 bp CCAGCGGCGGAGAGGAAATTACAAGGTACTGTCCAGTaGGAGGATGGAAGTGGGGATCAGGGACACGAAGAA +
Preference number: 6 (lower is better)
Translates to: PAAERKLQGTVQ*EDGSGDQGHEE
Trigger: TTCTTCGTGTCCCTGATCCCCACTTCCATCCTCCCACTGGACAGTACCTTGTAATTTCCTCTCCGCCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469272.1
ENST00000476324.1
ENST00000493304.2
CDS GCA 72 bp AAAAGTAGAGATTATGGAGTGTGTCCCCCACACCTCTaGGGACTAGGACACCCTGGTGTTGGCTGGAAACTG +
Preference number: 6 (lower is better)
Translates to: KSRDYGVCPPHL*GLGHPGVGWKL
Trigger: CAGTTTCCAGCCAACACCAGGGTGTCCTAGTCCGCAGAGGTGTGGGGGACACACTCCATAATCTCTACTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358647.5
CDS CCA 72 bp GGAGAGGAAATTACAAGGTACTGTCCAGTGGGAGGATaGAAGTGGGGATCAGGGACACGAAGAACTGACGTG +
Preference number: 6 (lower is better)
Translates to: GEEITRYCPVGG*KWGSGTRRTDV
Trigger: CACGTCAGTTCTTCGTGTCCCTGATCCCCACTTCCATCCTCCCACTGGACAGTACCTTGTAATTTCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469272.1
ENST00000476324.1
ENST00000493304.2
CDS CCA 72 bp GACAGTAGCAGCCTCTGGCAAGCTGGTGGGAGGGTCTaGCTCAGGGAAAAGGGTGAAGCAAATGAACAAAAT +
Preference number: 6 (lower is better)
Translates to: DSSSLWQAGGRV*LREKGEANEQN
Trigger: ATTTTGTTCATTTGCTTCACCCTTTTCCCTGAGCCAGACCCTCCCACCAGCTTGCCAGAGGCTGCTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CAA 90 bp TGTGCCAGGGTGCCAGTGCCTCTGGATGCCTTTGCCTTCTGTCTTTaGGCACCTCCTCCTCAGAATGCAGTTTTTATACCCTCACTCTTC +
Preference number: 6 (lower is better)
Translates to: CARVPVPLDAFAFCL*APPPQNAVFIPSLF
Trigger: GAAGAGTGAGGGTATAAAAACTGCATTCTGAGGAGGAGGTGCCAAAAGACAGAAGGCAAAGGCATCCAGAGGCACTGGCACCCTGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466347.5
CDS CAA 90 bp CCTGCATGCTTCATTGTGCCAGGGTGCCAGTGCCTCTGGATGCCTTaGCCTTCTGTCTTTTGGCACCTCCTCCTCAGAATGCAGTTTTTA +
Preference number: 6 (lower is better)
Translates to: PACFIVPGCQCLWMP*PSVFWHLLLRMQFL
Trigger: TAAAAACTGCATTCTGAGGAGGAGGTGCCAAAAGACAGAAGGCAAAGGCATCCAGAGGCACTGGCACCCTGGCACAATGAAGCATGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466347.5
CDS CAA 90 bp AGTATCTCCTTCACCCATCTGCCCCAGCCCATGTATTTCCAGGTATaGGAATCATGTGTTTTGCGGTTTGGTGTGCGTCCGGCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: SISFTHLPQPMYFQV*ESCVLRFGVRPAGC
Trigger: ACACCCTGCCGGACGCACACCAAACCGCAAAACACATGATTCCAATACCTGGAAATACATGGGCTGGGGCAGATGGGTGAAGGAGATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS TCA 72 bp AGAGCGTGGTGGACACACCGTAGGCTTGAAGGAATGTaGTACGTGTTGGTCTACAGGGCAGACAAAAGTGGA +
Preference number: 6 (lower is better)
Translates to: RAWWTHRRLEGM*YVLVYRADKSG
Trigger: TCCACTTTTGTCTGCCCTGTAGACCAACACGTATCACATTCCTTCAAGCCTACGGTGTGTCCACCACGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CCA 72 bp CTCCCAGGCTTGTCTGAGACATGGTACGTGTCTGGCTaGTCTGGGACAGGAGAAATTAGGAGGGTAAAATTG +
Preference number: 6 (lower is better)
Translates to: LPGLSETWYVSG*SGTGEIRRVKL
Trigger: CAATTTTACCCTCCTAATTTCTCCTGTCCCAGACCAGCCAGACACGTACCATGTCTCAGACAAGCCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CAA 72 bp GTGCCAGTGCCTCTGGATGCCTTTGCCTTCTGTCTTTaGGCACCTCCTCCTCAGAATGCAGTTTTTATACCC +
Preference number: 6 (lower is better)
Translates to: VPVPLDAFAFCL*APPPQNAVFIP
Trigger: GGGTATAAAAACTGCATTCTGAGGAGGAGGTGCCAAAAGACAGAAGGCAAAGGCATCCAGAGGCACTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466347.5
CDS CAA 72 bp TTCACCCATCTGCCCCAGCCCATGTATTTCCAGGTATaGGAATCATGTGTTTTGCGGTTTGGTGTGCGTCCG +
Preference number: 6 (lower is better)
Translates to: FTHLPQPMYFQV*ESCVLRFGVRP
Trigger: CGGACGCACACCAAACCGCAAAACACATGATTCCAATACCTGGAAATACATGGGCTGGGGCAGATGGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CAA 90 bp CATCTGCCCCAGCCCATGTATTTCCAGGTATTGGAATCATGTGTTTaGCGGTTTGGTGTGCGTCCGGCAGGGTGTCATAGGAAAAATGTG +
Preference number: 6 (lower is better)
Translates to: HLPQPMYFQVLESCV*RFGVRPAGCHRKNV
Trigger: CACATTTTTCCTATGACACCCTGCCGGACGCACACCAAACCGCAAAACACATGATTCCAATACCTGGAAATACATGGGCTGGGGCAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CCA 72 bp AGAGGATCAGTTCAGCCTTACTCCCTGAGAGTTTCATaGAGATCGACTTGGCTAAGTAATGGGCAATGGGGC +
Preference number: 6 (lower is better)
Translates to: RGSVQPYSLRVS*RSTWLSNGQWG
Trigger: GCCCCATTGCCCATTACTTAGCCAAGTCGATCTCCATGAAACTCTCAGGGAGTAAGGCTGAACTGATCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS GCA 72 bp CTTTGCCTTCTGTCTTTTGGCACCTCCTCCTCAGAATaGAGTTTTTATACCCTCACTCTTCACCCGCTCTCA +
Preference number: 6 (lower is better)
Translates to: LCLLSFGTSSSE*SFYTLTLHPLS
Trigger: TGAGAGCGGGTGAAGAGTGAGGGTATAAAAACTGCATTCTGAGGAGGAGGTGCCAAAAGACAGAAGGCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466347.5
CDS GCA 72 bp GAACAACTCATTGCCTGCTCCGGGTTTCCAGCATTGTaGAACAGTATTGGGGATGTACATTTTCCACGTGAC +
Preference number: 6 (lower is better)
Translates to: EQLIACSGFPAL*NSIGDVHFPRD
Trigger: GTCACGTGGAAAATGTACATCCCCAATACTGTTGCACAATGCTGGAAACCCGGAGCAGGCAATGAGTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469272.1
ENST00000476324.1
CDS GCA 72 bp TCAACTTCAGGCCGAATTCAAGAACAACTCATTGCCTaGTCCGGGTTTCCAGCATTGTGCAACAGTATTGGG +
Preference number: 6 (lower is better)
Translates to: STSGRIQEQLIA*SGFPALCNSIG
Trigger: CCCAATACTGTTGCACAATGCTGGAAACCCGGAGCAGGCAATGAGTTGTTCTTGAATTCGGCCTGAAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469272.1
ENST00000476324.1
CDS CAA 72 bp TTGCCTGCTCCGGGTTTCCAGCATTGTGCAACAGTATaGGGGATGTACATTTTCCACGTGACTGGTTATTGC +
Preference number: 6 (lower is better)
Translates to: LPAPGFQHCATV*GMYIFHVTGYC
Trigger: GCAATAACCAGTCACGTGGAAAATGTACATCCCCAATACTGTTGCACAATGCTGGAAACCCGGAGCAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469272.1
ENST00000476324.1
CDS CAA 90 bp GGCCGAATTCAAGAACAACTCATTGCCTGCTCCGGGTTTCCAGCATaGTGCAACAGTATTGGGGATGTACATTTTCCACGTGACTGGTTA +
Preference number: 6 (lower is better)
Translates to: GRIQEQLIACSGFPA*CNSIGDVHFPRDWL
Trigger: TAACCAGTCACGTGGAAAATGTACATCCCCAATACTGTTGCACAATGCTGGAAACCCGGAGCAGGCAATGAGTTGTTCTTGAATTCGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469272.1
ENST00000476324.1
CDS CAA 72 bp CAAGAACAACTCATTGCCTGCTCCGGGTTTCCAGCATaGTGCAACAGTATTGGGGATGTACATTTTCCACGT +
Preference number: 6 (lower is better)
Translates to: QEQLIACSGFPA*CNSIGDVHFPR
Trigger: ACGTGGAAAATGTACATCCCCAATACTGTTGCACAATGCTGGAAACCCGGAGCAGGCAATGAGTTGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469272.1
ENST00000476324.1
CDS CAA 90 bp TTGAAGAGAAAGAATCAACTTCAGGCCGAATTCAAGAACAACTCATaGCCTGCTCCGGGTTTCCAGCATTGTGCAACAGTATTGGGGATG +
Preference number: 6 (lower is better)
Translates to: LKRKNQLQAEFKNNS*PAPGFQHCATVLGM
Trigger: CATCCCCAATACTGTTGCACAATGCTGGAAACCCGGAGCAGGCAATGAGTTGTTCTTGAATTCGGCCTGAAGTTGATTCTTTCTCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469272.1
ENST00000476324.1
CDS GCA 72 bp AGAATCAACTTCAGGCCGAATTCAAGAACAACTCATTaGCTGCTCCGGGTTTCCAGCATTGTGCAACAGTAT +
Preference number: 6 (lower is better)
Translates to: RINFRPNSRTTH*LLRVSSIVQQY
Trigger: ATACTGTTGCACAATGCTGGAAACCCGGAGCAGGCAATGAGTTGTTCTTGAATTCGGCCTGAAGTTGATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469272.1
ENST00000476324.1
CDS CCA 72 bp TGGAAACTTCCAGTCCCAGAAAGTCTTTGTGTCAAATaGACATTCCAGCGGCGGAGAGGAAATTACAAGGTA +
Preference number: 6 (lower is better)
Translates to: WKLPVPESLCVK*TFQRRRGNYKV
Trigger: TACCTTGTAATTTCCTCTCCGCCGCTGGAATGTCCATTTGACACAAAGACTTTCTGGGACTGGAAGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469272.1
ENST00000476324.1
ENST00000493304.2
CDS CAA 72 bp AAGAATCAACTTCAGGCCGAATTCAAGAACAACTCATaGCCTGCTCCGGGTTTCCAGCATTGTGCAACAGTA +
Preference number: 6 (lower is better)
Translates to: KNQLQAEFKNNS*PAPGFQHCATV
Trigger: TACTGTTGCACAATGCTGGAAACCCGGAGCAGGCAATGAGTTGTTCTTGAATTCGGCCTGAAGTTGATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469272.1
ENST00000476324.1
CDS CAA 72 bp TTTGAAGTAGTGGAAACTTCCAGTCCCAGAAAGTCTTaGTGTCAAATGGACATTCCAGCGGCGGAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: FEVVETSSPRKS*CQMDIPAAERK
Trigger: TTTCCTCTCCGCCGCTGGAATGTCCATTTGACACAAAGACTTTCTGGGACTGGAAGTTTCCACTACTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469272.1
ENST00000476324.1
ENST00000493304.2
CDS CAA 72 bp TGTATTTCCAGGTATTGGAATCATGTGTTTTGCGGTTaGGTGTGCGTCCGGCAGGGTGTCATAGGAAAAATG +
Preference number: 6 (lower is better)
Translates to: CISRYWNHVFCG*VCVRQGVIGKM
Trigger: CATTTTTCCTATGACACCCTGCCGGACGCACACCAAACCGCAAAACACATGATTCCAATACCTGGAAATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS TCA 72 bp GGATCTGTGCAAGGTCATGTCAGAAATGAACAGCTGTaGCCAAACTGTGATCCTTTCAATTCCCAAAGTCTC +
Preference number: 6 (lower is better)
Translates to: GSVQGHVRNEQL*PNCDPFNSQSL
Trigger: GAGACTTTGGGAATTGAAAGGATCACAGTTTGGTCACAGCTGTTCATTTCTGACATGACCTTGCACAGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CCA 72 bp TGCAACAGTATTGGGGATGTACATTTTCCACGTGACTaGTTATTGCCAAATATGACTCCCAGGGAGTTGAGT +
Preference number: 6 (lower is better)
Translates to: CNSIGDVHFPRD*LLPNMTPRELS
Trigger: ACTCAACTCCCTGGGAGTCATATTTGGCAATAACCAGTCACGTGGAAAATGTACATCCCCAATACTGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469272.1
ENST00000476324.1
CDS CAA 72 bp TTATCTTCTGATCTACCTTCAGCCATAGTTCCATATTaGCCCCTCTGGAATCCTCCCATTCTCTCCAGAAAC +
Preference number: 6 (lower is better)
Translates to: LSSDLPSAIVPY*PLWNPPILSRN
Trigger: GTTTCTGGAGAGAATGGGAGGATTCCAGAGGGGCAAATATGGAACTATGGCTGAAGGTAGATCAGAAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358647.5
ENST00000498181.6
CDS CAA 72 bp TTATCTTCTGATCTACCTTCAGCCATAGTTCCATATTaGCCCCTCTGGAATCCTCCCATTCTCTCCTGGAAT +
Preference number: 6 (lower is better)
Translates to: LSSDLPSAIVPY*PLWNPPILSWN
Trigger: ATTCCAGGAGAGAATGGGAGGATTCCAGAGGGGCAAATATGGAACTATGGCTGAAGGTAGATCAGAAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS TCA 72 bp ATTGTGCAACAGTATTGGGGATGTACATTTTCCACGTaGCTGGTTATTGCCAAATATGACTCCCAGGGAGTT +
Preference number: 6 (lower is better)
Translates to: IVQQYWGCTFST*LVIAKYDSQGV
Trigger: AACTCCCTGGGAGTCATATTTGGCAATAACCAGTCACGTGGAAAATGTACATCCCCAATACTGTTGCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469272.1
ENST00000476324.1
CDS GCA 72 bp AAAGTCAACAAACCTCTTGGAACATGTGTACAATGCTaGCACTCCCTGGTCAGGAGACAAATTAATTGGACA +
Preference number: 6 (lower is better)
Translates to: KVNKPLGTCVQC*HSLVRRQINWT
Trigger: TGTCCAATTAATTTGTCTCCTGACCAGGGAGTGGCAGCATTGTACACATGTTCCAAGAGGTTTGTTGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CAA 72 bp TTATCTTCTGATCTACCTTCAGCCATAGTTCCATATTaGCCCCTCTGGAATCCTCCCATTCTCTCCAGAATA +
Preference number: 6 (lower is better)
Translates to: LSSDLPSAIVPY*PLWNPPILSRI
Trigger: TATTCTGGAGAGAATGGGAGGATTCCAGAGGGGCAAATATGGAACTATGGCTGAAGGTAGATCAGAAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493304.2
CDS CAA 90 bp ATTGGTTTATTTGAAGTAGTGGAAACTTCCAGTCCCAGAAAGTCTTaGTGTCAAATGGACATTCCAGCGGCGGAGAGGAAATTACAAGGT +
Preference number: 6 (lower is better)
Translates to: IGLFEVVETSSPRKS*CQMDIPAAERKLQG
Trigger: ACCTTGTAATTTCCTCTCCGCCGCTGGAATGTCCATTTGACACAAAGACTTTCTGGGACTGGAAGTTTCCACTACTTCAAATAAACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469272.1
ENST00000476324.1
ENST00000493304.2
CDS CCA 72 bp AGGTCACATATTTACAATGGAGCTAGCATCAGGAAATaGCTCCTTTTGCTGTGTATTGTCCTTGATTCCACA +
Preference number: 6 (lower is better)
Translates to: RSHIYNGASIRK*LLLLCIVLDST
Trigger: TGTGGAATCAAGGACAATACACAGCAAAAGGAGCCATTTCCTGATGCTAGCTCCATTGTAAATATGTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476324.1
CDS CAA 72 bp ATTTACAATGGAGCTAGCATCAGGAAATGGCTCCTTTaGCTGTGTATTGTCCTTGATTCCACAGGTGGAAAA +
Preference number: 6 (lower is better)
Translates to: IYNGASIRKWLL*LCIVLDSTGGK
Trigger: TTTTCCACCTGTGGAATCAAGGACAATACACAGCAAAAGGAGCCATTTCCTGATGCTAGCTCCATTGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476324.1