RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GIMAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000106560

Ensembl transcript IDs: ENST00000223293.10, ENST00000474605.1, ENST00000487388.1

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp AATCTTATTTTCTGTAGGCCAGTGAAATTATGGCCTCACAGTAGACATGCAATGCCTGATACACCGCGCTaGAGCTTGCTTAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: NLIFCRPVKLWPHSRHAMPDTPR*SLLRGS
Trigger: GCTGCCTCTAAGCAAGCTCCAGCGCGGTGTATCAGG...CATTGCATGTCTACTGTGAGGCCATAATTTCACTGGCCTACAGAAAATAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS-3UTR TCA 90 bp AATCTTATTTTCTGTAGGCCAGTGAAATTATGGCCTCACAGTAGACATGCAATGTTCCTCTCGCCCCAGTaGCTGTGTTCATTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: NLIFCRPVKLWPHSRHAMFLSPQ*LCSFWS
Trigger: GGACCAAAATGAACACAGTCACTGGGGCGAGAGGAA...CATTGCATGTCTACTGTGAGGCCATAATTTCACTGGCCTACAGAAAATAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS-3UTR CCA 90 bp AATCTTATTTTCTGTAGGCCAGTGAAATTATGGCCTCACAGTAGACATGCAATGAGGCCAGTGAAATTATaGCCTCACAGTAGACATGCA +
Preference number: 4 (lower is better)
Translates to: NLIFCRPVKLWPHSRHAMRPVKL*PHSRHA
Trigger: TGCATGTCTACTGTGAGGCCATAATTTCACTGGCCT...CATTGCATGTCTACTGTGAGGCCATAATTTCACTGGCCTACAGAAAATAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS-3UTR TCA 90 bp AATCTTATTTTCTGTAGGCCAGTGAAATTATGGCCTCACAGTAGACATGCAATGTTTTCTGTAGGCCAGTaGAATTATGGCCTCACAGTA +
Preference number: 4 (lower is better)
Translates to: NLIFCRPVKLWPHSRHAMFSVGQ*NYGLTV
Trigger: TACTGTGAGGCCATAATTTCACTGGCCTACAGAAAA...CATTGCATGTCTACTGTGAGGCCATAATTTCACTGGCCTACAGAAAATAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS-3UTR TCA 90 bp AATCTTATTTTCTGTAGGCCAGTGAAATTATGGCCTCACAGTAGACATGCAATGGTCCATTGGTGTTCCTaGTTTACTGTTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: NLIFCRPVKLWPHSRHAMVHWCS*FTVQRN
Trigger: GTTTCTTTGAACAGTAAATCAGGAACACCAATGGAC...CATTGCATGTCTACTGTGAGGCCATAATTTCACTGGCCTACAGAAAATAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS-3UTR CCA 90 bp AATCTTATTTTCTGTAGGCCAGTGAAATTATGGCCTCACAGTAGACATGCAATGACAGTAGACATGCAATaGACACTTGTACTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: NLIFCRPVKLWPHSRHAMTVDMQ*TLVLKR
Trigger: CCTTTTAAGTACAAGTGTCCATTGCATGTCTACTGT...CATTGCATGTCTACTGTGAGGCCATAATTTCACTGGCCTACAGAAAATAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS CCA 90 bp CTATATTCTGAAAACAGCAGCCAAGCAGCTCCTGATACACCGCGCTaGAGCTTGCTTAGAGGCAGCCAAATTGCACGTTTAACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LYSENSSQAAPDTPR*SLLRGSQIARLTFL
Trigger: GAGGAAGGTTAAACGTGCAATTTGGCTGCCTCTAAGCAAGCTCCAGCGCGGTGTATCAGGAGCTGCTTGGCTGCTGTTTTCAGAATATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS TCA 90 bp TCTGGTGTGTCAATAATGACAATCTCTCTATTTCCCCAGCTTCCCTaGCTTTTGCTGCAAGTCTTAGTCAAGGTCTGGGAACCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SGVSIMTISLFPQLP*LLLQVLVKVWEPSF
Trigger: GAAGCTGGGTTCCCAGACCTTGACTAAGACTTGCAGCAAAAGTCAGGGAAGCTGGGGAAATAGAGAGATTGTCATTATTGACACACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223293.10
CDS TCA 90 bp CTTAGAGGCAGCCAAATTGCACGTTTAACCTTCCTCTCGCCCCAGTaGCTGTGTTCATTTTGGTCCATTGGTGTTCCTGATTTACTGTTC +
Preference number: 5 (lower is better)
Translates to: LRGSQIARLTFLSPQ*LCSFWSIGVPDLLF
Trigger: GAACAGTAAATCAGGAACACCAATGGACCAAAATGAACACAGTCACTGGGGCGAGAGGAAGGTTAAACGTGCAATTTGGCTGCCTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS TCA 90 bp ACACACACACACACACACACACGTGAAGTCACCTTCTTACCCCAGTaGCTGTGTTCATTTTGGTCCATTGGTGTTCCTGATTTACTGTTC +
Preference number: 5 (lower is better)
Translates to: THTHTHTREVTFLPQ*LCSFWSIGVPDLLF
Trigger: GAACAGTAAATCAGGAACACCAATGGACCAAAATGAACACAGTCACTGGGGTAAGAAGGTGACTTCACGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487388.1
CDS CCA 90 bp CTCTTTGTACAGAGCTTCACAGTGGTCCTTCCAAGAAAACATATCTaGTGTGTCAATAATGACAATCTCTCTATTTCCCCAGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: LFVQSFTVVLPRKHI*CVNNDNLSISPASL
Trigger: CAGGGAAGCTGGGGAAATAGAGAGATTGTCATTATTGACACACCAGATATGTTTTCTTGGAAGGACCACTGTGAAGCTCTGTACAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223293.10
CDS-3UTR CAA 90 bp AATCTTATTTTCTGTAGGCCAGTGAAATTATGGCCTCACAGTAGACATGCAATGACATGCAATGGACACTaGTACTTAAAAGGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: NLIFCRPVKLWPHSRHAMTCNGH*YLKGSR
Trigger: CCTGCTTCCTTTTAAGTACAAGTGTCCATTGCATGT...CATTGCATGTCTACTGTGAGGCCATAATTTCACTGGCCTACAGAAAATAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS-3UTR CAA 90 bp AATCTTATTTTCTGTAGGCCAGTGAAATTATGGCCTCACAGTAGACATGCAATGGTTCATTTTGGTCCATaGGTGTTCCTGATTTACTGT +
Preference number: 5 (lower is better)
Translates to: NLIFCRPVKLWPHSRHAMVHFGP*VFLIYC
Trigger: ACAGTAAATCAGGAACACCAATGGACCAAAATGAAC...CATTGCATGTCTACTGTGAGGCCATAATTTCACTGGCCTACAGAAAATAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS CAA 90 bp TCTGAAAACAGCAGCCAAGCAGCTCCTGATACACCGCGCTGGAGCTaGCTTAGAGGCAGCCAAATTGCACGTTTAACCTTCCTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: SENSSQAAPDTPRWS*LRGSQIARLTFLSP
Trigger: GGGCGAGAGGAAGGTTAAACGTGCAATTTGGCTGCCTCTAAGCAAGCTCCAGCGCGGTGTATCAGGAGCTGCTTGGCTGCTGTTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS CCA 72 bp GAAAACAGCAGCCAAGCAGCTCCTGATACACCGCGCTaGAGCTTGCTTAGAGGCAGCCAAATTGCACGTTTA +
Preference number: 6 (lower is better)
Translates to: ENSSQAAPDTPR*SLLRGSQIARL
Trigger: TAAACGTGCAATTTGGCTGCCTCTAAGCAAGCTCCAGCGCGGTGTATCAGGAGCTGCTTGGCTGCTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS GCA 72 bp GTCAAGGTCTGGGAACCCAGCTTCGATTCAAATGCTTaGTTCCTGAGGATGCTGTTCCCTGCAGCACTTTTG +
Preference number: 6 (lower is better)
Translates to: VKVWEPSFDSNA*FLRMLFPAALL
Trigger: CAAAAGTGCTGCAGGGAACAGCATCCTCAGGAAGCAAGCATTTGAATCGAAGCTGGGTTCCCAGACCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223293.10
CDS GCA 72 bp AGGCACAGATTCGCCCACCACATGCTGCCACCAGCTTaGTTAGGGCTTTGTTATCTGAGTCGTGCATGTAAT +
Preference number: 6 (lower is better)
Translates to: RHRFAHHMLPPA*LGLCYLSRACN
Trigger: ATTACATGCACGACTCAGATAACAAAGCCCTAAGCAAGCTGGTGGCAGCATGTGGTGGGCGAATCTGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223293.10
CDS TCA 72 bp AGCCAAATTGCACGTTTAACCTTCCTCTCGCCCCAGTaGCTGTGTTCATTTTGGTCCATTGGTGTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: SQIARLTFLSPQ*LCSFWSIGVPD
Trigger: ATCAGGAACACCAATGGACCAAAATGAACACAGTCACTGGGGCGAGAGGAAGGTTAAACGTGCAATTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474605.1
CDS TCA 72 bp CACACACACACACGTGAAGTCACCTTCTTACCCCAGTaGCTGTGTTCATTTTGGTCCATTGGTGTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: HTHTREVTFLPQ*LCSFWSIGVPD
Trigger: ATCAGGAACACCAATGGACCAAAATGAACACAGTCACTGGGGTAAGAAGGTGACTTCACGTGTGTGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487388.1