RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GGT6 (Homo sapiens)

Ensembl gene IDs: ENSG00000167741

Ensembl transcript IDs: ENST00000301395.7, ENST00000381550.8, ENST00000573591.1, ENST00000574154.5, ENST00000574584.1, ENST00000575573.1

Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTAAGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTaGGCTCTGCCTGTCCTGCTTCGTGGGGCCCAGGGCCTAGGCAGA +
Preference number: 1 (lower is better)
Translates to: VRGVLKGRTEMPTVP*ALPVLLRGAQGLGR
Trigger: TCTGCCTAGGCCCTGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR TCA 90 bp GCCCAGGGCCTAGGCAGAGGCTCTGCACTCTTTCCACTGTCCTCCTaGAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCT +
Preference number: 1 (lower is better)
Translates to: AQGLGRGSALFPLSS*KLDLNSVLAPGPTA
Trigger: AGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGTGGAAAGAGTGCAGAGCCTCTGCCTAGGCCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR GCA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCACTCAAGCGAGCTTCCTaGCTCAGCCTCCCAAGCAGC +
Preference number: 2 (lower is better)
Translates to: DRDANSTLGSACPASWGPLKRAS*LSLPSS
Trigger: GCTGCTTGGGAGGCTGAGGCAGGAAGCTCGCTTGAG...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR GCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCGGGTGCACACTCCATTaGTGCTGTGTCTGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAGCTLH*CCVCSA
Trigger: AGCAGAGCAGACACAGCAGCAATGGAGTGTGCACCC...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR GCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGATAACTCTGCCTTCTaGCAGACCCACCCCCATCCT +
Preference number: 2 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGDNSAF*QTHPHP
Trigger: AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATC...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR GCA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCAGTGATCCTAGCTCTCTaGAGCCTTGAACTCCTGAGC +
Preference number: 2 (lower is better)
Translates to: DRDANSTLGSACPASWGPVILAL*SLELLS
Trigger: GCTCAGGAGTTCAAGGCTGCAGAGAGCTAGGATCAC...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR CCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTAGCCTCCCAAGCAGCTaGGACAACAGGCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPSLPSS*DNRHVP
Trigger: TGGCACATGCCTGTTGTCCCAGCTGCTTGGGAGGCT...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR GCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCCATTGCTGCTGTGTCTaGTCTGCTCCTGCCCCCATG +
Preference number: 2 (lower is better)
Translates to: TVLLKAGSELSASPRPYCHCCCV*SAPAPM
Trigger: CATGGGGGCAGGAGCAGAGCAGACACAGCAGCAATG...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR GCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCACCACACCCTGCGGGTaGACACTCCATTGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: TVLLKAGSELSASPRPYCTTPCG*TLHCCC
Trigger: ACAGCAGCAATGGAGTGTGCACCCGCAGGGTGTGGT...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR GCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCAGCCCCAGGCCCTACTaGTTTTTCGTTATTACCCTG +
Preference number: 2 (lower is better)
Translates to: RTEMPTVPWALPVLLRGASPRPY*FFVITL
Trigger: CAGGGTAATAACGAAAAAGCAGTAGGGCCTGGGGCT...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR TCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCTTTCCACTGTCCTCCTaGAAGCTGGATCTGAACTCA +
Preference number: 2 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAFPLSS*KLDLNS
Trigger: TGAGTTCAGATCCAGCTTTCAGGAGGACAGTGGAAA...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR TCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGGCCTGAGCCAGCAGTaGGCACATAATAAATCCTTT +
Preference number: 2 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGGLSQQ*AHNKSF
Trigger: AAAGGATTTATTATGTGCTCACTGCTGGCTCAGGCC...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR TCA 90 bp GCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTTTTCGTTATTACCCCAGAGGTTGGGGCCTaGGCCAGCAGTGAGCACATA +
Preference number: 2 (lower is better)
Translates to: AGSELSASPRPYCFFVITPEVGA*ASSEHI
Trigger: TATGTGCTCACTGCTGGCTCAGGCCCCAACCTCTGG...GGTAATAACGAAAAAGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR TCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGTTTCCACTGTCCTCCTaGAAGCTGGATCTGAACTCA +
Preference number: 2 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGFPLSS*KLDLNS
Trigger: TGAGTTCAGATCCAGCTTTCAGGAGGACAGTGGAAA...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR GCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCACTCAAGCGAGCTTCCTaGCTCAGCCTCCCAAGCAGC +
Preference number: 2 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPLKRAS*LSLPSS
Trigger: GCTGCTTGGGAGGCTGAGGCAGGAAGCTCGCTTGAG...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR CCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCGCAATGGTGCGATCTTaGTTCACTGCAACCTCCACC +
Preference number: 2 (lower is better)
Translates to: TVLLKAGSELSASPRPYCAMVRS*FTATST
Trigger: GGTGGAGGTTGCAGTGAACCAAGATCGCACCATTGC...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR GCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGGGTGCACACTCCATTaGTGCTGTGTCTGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPGCTLH*CCVCSA
Trigger: AGCAGAGCAGACACAGCAGCAATGGAGTGTGCACCC...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR GCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGGTGATCCTAGCTCTCTaGAGCCTTGAACTCCTGAGC +
Preference number: 2 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVVILAL*SLELLS
Trigger: GCTCAGGAGTTCAAGGCTGCAGAGAGCTAGGATCAC...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR GCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTCAGTACCCTGGGCTCTaGCTGTCCTGCTTCGTGGGG +
Preference number: 2 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCQYPGL*LSCFVG
Trigger: CCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTG...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR GCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGGTGGGGTTGCAATGGTaGGATCTTGGTTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVVGLQW*DLGSLQ
Trigger: TTGCAGTGAACCAAGATCGCACCATTGCAACCCCAC...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR TCA 90 bp GCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTTTTCGTTATTACCGGCCTGAGCCAGCAGTaGGCACATAATAAATCCTTT +
Preference number: 2 (lower is better)
Translates to: AGSELSASPRPYCFFVITGLSQQ*AHNKSF
Trigger: AAAGGATTTATTATGTGCTCACTGCTGGCTCAGGCC...GGTAATAACGAAAAAGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR CCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTGCAATGGTGCGATCTTaGTTCACTGCAACCTCCACC +
Preference number: 2 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCAMVRS*FTATST
Trigger: GGTGGAGGTTGCAGTGAACCAAGATCGCACCATTGC...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR CCA 72 bp GCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTaGGGCCCAGGGCCTAGGCAGAGGCTCTGCACTCTT +
Preference number: 3 (lower is better)
Translates to: ANSTLGSACPAS*GPGPRQRLCTL
Trigger: AAGAGTGCAGAGCCTCTGCCTAGGCCCTGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR CAA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCGACAGGGTTTCCCTCTaGTTGCCCAGGTGGGGTTGC +
Preference number: 3 (lower is better)
Translates to: RTEMPTVPWALPVLLRGADRVSL*LPRWGC
Trigger: GCAACCCCACCTGGGCAACAAGAGGGAAACCCTGTC...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR CAA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGACAGGGTTTCCCTCTaGTTGCCCAGGTGGGGTTGC +
Preference number: 3 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPDRVSL*LPRWGC
Trigger: GCAACCCCACCTGGGCAACAAGAGGGAAACCCTGTC...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR GCA 72 bp CCCAGGTGGGGTTGCAATGGTGCGATCTTGGTTCACTaGAACCTCCACCTCTCGGGTTCAAGTGATTCTCCT +
Preference number: 3 (lower is better)
Translates to: PRWGCNGAILVH*NLHLSGSSDSP
Trigger: AGGAGAATCACTTGAACCCGAGAGGTGGAGGTTGCAGTGAACCAAGATCGCACCATTGCAACCCCACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
3UTR-3UTR CAA 90 bp GCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTTTTCGTTATTACCAGGGTTTCCCTCTTGTaGCCCAGGTGGGGTTGCAAT +
Preference number: 3 (lower is better)
Translates to: AGSELSASPRPYCFFVITRVSLL*PRWGCN
Trigger: ATTGCAACCCCACCTGGGCAACAAGAGGGAAACCCT...GGTAATAACGAAAAAGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR-3UTR CAA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTAGGGTTTCCCTCTTGTaGCCCAGGTGGGGTTGCAAT +
Preference number: 3 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCRVSLL*PRWGCN
Trigger: ATTGCAACCCCACCTGGGCAACAAGAGGGAAACCCT...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCGCAGCAGGTGCAGGGTaGGCAGAGCCGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAAAGAG*AEPRAA
Trigger: GGCTGCCCGCGGCTCTGCCCACCCTGCACCTGCTGC...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCACGGCGGCCAGGGCACTaGTCTCGGGGCTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: DRDANSTLGSACPASWGPRRPGH*SRGSQQ
Trigger: CTGCTGTGAGCCCCGAGAGCAGTGCCCTGGCCGCCG...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCAGGGCTCTGCCTGTCCTaGTTCGTGGGGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DRDANSTLGSACPASWGPGLCLS*FVGPRA
Trigger: GGCCCTGGGCCCCACGAAGCAGGACAGGCAGAGCCC...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGCAGCAGGTGCAGGGTaGGCAGAGCCGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIAAGAG*AEPRAA
Trigger: GGCTGCCCGCGGCTCTGCCCACCCTGCACCTGCTGC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCATCGCCCCAGCCCTCCTaGCTGCCAGCCTTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: DRDANSTLGSACPASWGPSPQPS*LPAFPA
Trigger: AGCCGGAAAGGCTGGCAGGCAGGAGGGCTGGGGCGA...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCACGTGCATGCAGCAGGTaGAGGGTGGGCAGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: DRDANSTLGSACPASWGPRACSR*RVGRAA
Trigger: CGCGGCTCTGCCCACCCTGCACCTGCTGCATGCACG...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCGTGCATGCAGCAGGTaGAGGGTGGGCAGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGARACSR*RVGRAA
Trigger: CGCGGCTCTGCCCACCCTGCACCTGCTGCATGCACG...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCAGGTGGGAGCGAGGGCTaGGCTGCGAAGCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: DRDANSTLGSACPASWGPGGSEG*AAKHSC
Trigger: GCAGCTGTGCTTCGCAGCGCAGCCCTCGCTCCCACC...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGGAGCACAGAGCCGCTaGTGTCCACGGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIGAQSR*CPRRPG
Trigger: CCCTGGCCGCCGTGGACAGCAGCGGCTCTGTGCTCC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGCAGCAGGTGCAGGGTaGGCAGAGCCGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPAAGAG*AEPRAA
Trigger: GGCTGCCCGCGGCTCTGCCCACCCTGCACCTGCTGC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCCTGAGCCAGCGTGGTaGGGCCCACTAGCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAPEPAW*GPLAGV
Trigger: CACGCCTGCTAGTGGGCCCCACCACGCTGGCTCAGG...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTACCAGGAAGCCCTCCTaGGCCAGCGTGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPTRKPS*ASVVGP
Trigger: GGGCCCCACCACGCTGGCTCAGGAGGGCTTCCTGGT...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCAGCAGCAGCAGGGCTaGCACTACACGGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAQQQQG*HYTGPG
Trigger: ACCTGGGCCCGTGTAGTGGCAGCCCTGCTGCTGCTG...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGGTGGGAGCGAGGGCTaGGCTGCGAAGCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIGGSEG*AAKHSC
Trigger: GCAGCTGTGCTTCGCAGCGCAGCCCTCGCTCCCACC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCAGGGCTCACAGCAGTCTaGAGGAACGGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DRDANSTLGSACPASWGPGLTAV*RNGGQG
Trigger: CCCCTGCCCACCGTTCCTGCAGACTGCTGTGAGCCC...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCGGCGGCCAGGGCACTaGTCTCGGGGCTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPRRPGH*SRGSQQ
Trigger: CTGCTGTGAGCCCCGAGAGCAGTGCCCTGGCCGCCG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGGAGCACAGAGCCGCTaGTGTCCACGGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPGAQSR*CPRRPG
Trigger: CCCTGGCCGCCGTGGACAGCAGCGGCTCTGTGCTCC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGGAGTGTCCGCCGGGTaGAGGGGCCACAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIGVSAG*RGHRAQ
Trigger: TTGGGCTCTGTGGCCCCTCCACCCGGCGGACACTCC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCATATACGCCAGGGCCGTaGGAGTGTCCGCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: DRDANSTLGSACPASWGPYTPGP*ECPPGG
Trigger: TCCACCCGGCGGACACTCCCACGGCCCTGGCGTATA...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCCTCCTGAGCCAGCGTaGTGGGGCCCACTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIPPEPA*WGPLAG
Trigger: GCCTGCTAGTGGGCCCCACCACGCTGGCTCAGGAGG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCCAGTTGTGGGTTGGTaGCTCGGGCCCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIPVVGW*LGPQRP
Trigger: TGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGCTGCCAGTTGTGGGTTaGTGGCTCGGGCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGLPVVG*WLGPQR
Trigger: GCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAG...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGCCAGTTGTGGGTTaGTGGCTCGGGCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPILPVVG*WLGPQR
Trigger: GCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCACACAGCTGCCAGTTGTaGGTTGGTGGCTCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: DRDANSTLGSACPASWGPHSCQL*VGGSGP
Trigger: GGGGCCCGAGCCACCAACCCACAACTGGCAGCTGTG...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCAGTTCTGGGCCAGCTaGGGGACTGGGGGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAQFWAS*GTGGGE
Trigger: TTCACCACCCCCAGTCCCTCAGCTGGCCCAGAACTG...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCCTAGCCCCGTGGCATaGGGATGCACCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIPSPVA*GCTTAR
Trigger: CCTGGCAGTGGTGCATCCTCATGCCACGGGGCTAGG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGCCCAGCCCTCCTGCCTaGCAGCCTTTCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGPSPPA*QPFRLC
Trigger: ACACAGCCGGAAAGGCTGGCAGGCAGGAGGGCTGGG...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCAGCAGCAGCAGGGCTaGCACTACACGGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIQQQQG*HYTGPG
Trigger: ACCTGGGCCCGTGTAGTGGCAGCCCTGCTGCTGCTG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCGTGCATGCAGCAGGTaGAGGGTGGGCAGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPRACSR*RVGRAA
Trigger: CGCGGCTCTGCCCACCCTGCACCTGCTGCATGCACG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTCGGCCGAAGCGTGCATaGAGCAGGTGCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPRPKRA*SRCRVG
Trigger: GCCCACCCTGCACCTGCTGCATGCACGCTTCGGCCG...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCGGCCGAAGCGTGCATaGAGCAGGTGCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPRPKRA*SRCRVG
Trigger: GCCCACCCTGCACCTGCTGCATGCACGCTTCGGCCG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGGTGGGAGCGAGGGCTaGGCTGCGAAGCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPGGSEG*AAKHSC
Trigger: GCAGCTGTGCTTCGCAGCGCAGCCCTCGCTCCCACC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCCCGGAGCGCAGGGCTaGCTCCAACAGTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPPGAQG*LQQCQQ
Trigger: CTGCTGGCACTGTTGGAGGCAGCCCTGCGCTCCGGG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGGGCTCACAGCAGTCTaGAGGAACGGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIGLTAV*RNGGQG
Trigger: CCCCTGCCCACCGTTCCTGCAGACTGCTGTGAGCCC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGTGCTCTGTGTGGGCTaGCACCTGGAGCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIVLCVG*HLEQGP
Trigger: GGGACCCTGCTCCAGGTGGCAGCCCACACAGAGCAC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCTGGAGACATGGGCGTaGTCTGTGTGGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGALETWA*SVWAAT
Trigger: GGTGGCAGCCCACACAGAGCACGCCCATGTCTCCAG...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCGGGCTCTGCCTGTCCTaGTTCGTGGGGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCGLCLS*FVGPRA
Trigger: GGCCCTGGGCCCCACGAAGCAGGACAGGCAGAGCCC...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGGAGTGTCCGCCGGGTaGAGGGGCCACAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPGVSAG*RGHRAQ
Trigger: TTGGGCTCTGTGGCCCCTCCACCCGGCGGACACTCC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTCCTGAGCCAGCGTGGTaGGGCCCACTAGCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPPEPAW*GPLAGV
Trigger: CACGCCTGCTAGTGGGCCCCACCACGCTGGCTCAGG...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCCTGAGCCAGCGTGGTaGGGCCCACTAGCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPPEPAW*GPLAGV
Trigger: CACGCCTGCTAGTGGGCCCCACCACGCTGGCTCAGG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTCCTCCTGAGCCAGCGTaGTGGGGCCCACTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPPPEPA*WGPLAG
Trigger: GCCTGCTAGTGGGCCCCACCACGCTGGCTCAGGAGG...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCCTCCTGAGCCAGCGTaGTGGGGCCCACTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPPPEPA*WGPLAG
Trigger: GCCTGCTAGTGGGCCCCACCACGCTGGCTCAGGAGG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCCAGTTGTGGGTTGGTaGCTCGGGCCCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPPVVGW*LGPQRP
Trigger: TGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCTGCCAGTTGTGGGTTaGTGGCTCGGGCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPLPVVG*WLGPQR
Trigger: GCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCACAGCTGCCAGTTGTaGGTTGGTGGCTCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIHSCQL*VGGSGP
Trigger: GGGGCCCGAGCCACCAACCCACAACTGGCAGCTGTG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGTGTGGGCTGCCACCTaGAGCAGGGTCCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIVWAAT*SRVPWP
Trigger: TGGCCAAGGGACCCTGCTCCAGGTGGCAGCCCACAC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR TCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCGGTCTGTGCTGGGCCTaGTGTCAGGGCCGTGGAATT +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAGLCWA*CQGRGI
Trigger: AATTCCACGGCCCTGACATCAGGCCCAGCACAGACC...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCAGTTCTGGGCCAGCTaGGGGACTGGGGGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIQFWAS*GTGGGE
Trigger: TTCACCACCCCCAGTCCCTCAGCTGGCCCAGAACTG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR TCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCCAGAGGTTGGGGCCTaGGCCAGCAGTGAGCACATA +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAPEVGA*ASSEHI
Trigger: TATGTGCTCACTGCTGGCTCAGGCCCCAACCTCTGG...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCCTAGCCCCGTGGCATaGGGATGCACCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPPSPVA*GCTTAR
Trigger: CCTGGCAGTGGTGCATCCTCATGCCACGGGGCTAGG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCCCAGCCCTCCTGCCTaGCAGCCTTTCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPPSPPA*QPFRLC
Trigger: ACACAGCCGGAAAGGCTGGCAGGCAGGAGGGCTGGG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCAGCAGCAGCAGGGCTaGCACTACACGGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPQQQQG*HYTGPG
Trigger: ACCTGGGCCCGTGTAGTGGCAGCCCTGCTGCTGCTG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCAGGCGGCCGAAGCGTaGATGCAGCAGGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPQAAEA*MQQVQG
Trigger: ACCCTGCACCTGCTGCATGCACGCTTCGGCCGCCTG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCAGCCACCAGAGCCCTTaGCAGGGGTGTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPISHQSP*QGCVHQ
Trigger: CTGGTGGACACACCCCTGGCAAGGGCTCTGGTGGCT...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGGCTGCCTCCAACAGTaGCAGCAGTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIGCLQQ*QQFWAS
Trigger: GCTGGCCCAGAACTGCTGGCACTGTTGGAGGCAGCC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCCCCGGAGCGCAGGGCTaGCTCCAACAGTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCPGAQG*LQQCQQ
Trigger: CTGCTGGCACTGTTGGAGGCAGCCCTGCGCTCCGGG...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGGGCTCACAGCAGTCTaGAGGAACGGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPGLTAV*RNGGQG
Trigger: CCCCTGCCCACCGTTCCTGCAGACTGCTGTGAGCCC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTGCTCTGTGTGGGCTaGCACCTGGAGCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPVLCVG*HLEQGP
Trigger: GGGACCCTGCTCCAGGTGGCAGCCCACACAGAGCAC...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGTGCTCTGTGTGGGCTaGCACCTGGAGCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPVLCVG*HLEQGP
Trigger: GGGACCCTGCTCCAGGTGGCAGCCCACACAGAGCAC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGGAGACATGGGCGTaGTCTGTGTGGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPILETWA*SVWAAT
Trigger: GGTGGCAGCCCACACAGAGCACGCCCATGTCTCCAG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCAGTGGGAGCATGTGGCTaGAGGGCTGATGATGGCACC +
Preference number: 4 (lower is better)
Translates to: DRDANSTLGSACPASWGPVGACG*RADDGT
Trigger: GGTGCCATCATCAGCCCTGCAGCCACATGCTCCCAC...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381550.8
CDS-3UTR CCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCGCCAGCCTTGTTCCTaGAAGAGTCCTGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGARQPCS*KSPGAS
Trigger: GGAGGCACCAGGACTCTTCCAGGAACAAGGCTGGCG...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCGGAGTGTCCGCCGGGTaGAGGGGCCACAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCGVSAG*RGHRAQ
Trigger: TTGGGCTCTGTGGCCCCTCCACCCGGCGGACACTCC...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTTATACGCCAGGGCCGTaGGAGTGTCCGCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPYTPGP*ECPPGG
Trigger: TCCACCCGGCGGACACTCCCACGGCCCTGGCGTATA...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCTGATGATGGCACCGTaGTGGTATACGCCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGALMMAP*WYTPGP
Trigger: CGGCCCTGGCGTATACCACCACGGTGCCATCATCAG...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCCTGCCAGTTGTGGGTTaGTGGCTCGGGCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCLPVVG*WLGPQR
Trigger: GCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAG...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCACAGCTGCCAGTTGTaGGTTGGTGGCTCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPHSCQL*VGGSGP
Trigger: GGGGCCCGAGCCACCAACCCACAACTGGCAGCTGTG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGCTGGTTCCAAAGTaGGCCTGGGCACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPILLVPK*AWAQPR
Trigger: CCTCGGCTGTGCCCAGGCCCACTTTGGAACCAGCAG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCGTAGGGTGTGAGTCATaGCCCTGGCCACATCAGGGG +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAVGCES*PWPHQG
Trigger: CCCCTGATGTGGCCAGGGCCATGACTCACACCCTAC...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGTGTGGGCTGCCACCTaGAGCAGGGTCCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPVWAAT*SRVPWP
Trigger: TGGCCAAGGGACCCTGCTCCAGGTGGCAGCCCACAC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCTGGCACCTAGCCCCGTaGCATGAGGATGCACCACTG +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAWHLAP*HEDAPL
Trigger: CAGTGGTGCATCCTCATGCCACGGGGCTAGGTGCCA...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381550.8
CDS-3UTR TCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCCTGTCGACCTGCCCTaGTTCTGGAGCTGCCTCACA +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIPVDLP*FWSCLT
Trigger: TGTGAGGCAGCTCCAGAATCAGGGCAGGTCGACAGG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR TCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCGGCCGTGGAATTGCCTaGGGAGCTATCGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAGRGIA*GAIVEE
Trigger: CTCTTCCACGATAGCTCCTCAGGCAATTCCACGGCC...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGGTCTGTGCTGGGCCTaGTGTCAGGGCCGTGGAATT +
Preference number: 4 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGGLCWA*CQGRGI
Trigger: AATTCCACGGCCCTGACATCAGGCCCAGCACAGACC...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCAGTTCTGGGCCAGCTaGGGGACTGGGGGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPQFWAS*GTGGGE
Trigger: TTCACCACCCCCAGTCCCTCAGCTGGCCCAGAACTG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCCAGGCGGCCGAAGCGTaGATGCAGCAGGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCQAAEA*MQQVQG
Trigger: ACCCTGCACCTGCTGCATGCACGCTTCGGCCGCCTG...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTAGCCACCAGAGCCCTTaGCAGGGGTGTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPSHQSP*QGCVHQ
Trigger: CTGGTGGACACACCCCTGGCAAGGGCTCTGGTGGCT...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGCTGCGAAGCACAGCTaGCAGTTGTGGGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIAAKHS*QLWVGG
Trigger: GCCACCAACCCACAACTGGCAGCTGTGCTTCGCAGC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGAGCGAGGGCTGCGCTaGGAAGCACAGCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPERGLR*EAQLPV
Trigger: AACTGGCAGCTGTGCTTCGCAGCGCAGCCCTCGCTC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGGCTGCCTCCAACAGTaGCAGCAGTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPGCLQQ*QQFWAS
Trigger: GCTGGCCCAGAACTGCTGGCACTGTTGGAGGCAGCC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCGGGCTCACAGCAGTCTaGAGGAACGGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCGLTAV*RNGGQG
Trigger: CCCCTGCCCACCGTTCCTGCAGACTGCTGTGAGCCC...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCGTGCTCTGTGTGGGCTaGCACCTGGAGCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCVLCVG*HLEQGP
Trigger: GGGACCCTGCTCCAGGTGGCAGCCCACACAGAGCAC...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCTGGAGACATGGGCGTaGTCTGTGTGGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPLETWA*SVWAAT
Trigger: GGTGGCAGCCCACACAGAGCACGCCCATGTCTCCAG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCAAGCGAGCTTCCTaGCTCAGCCTCCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPILKRAS*LSLPSS
Trigger: GCTGCTTGGGAGGCTGAGGCAGGAAGCTCGCTTGAG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCATGATGGCACCGTGGTaGTATACGCCAGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIMMAPW*YTPGPW
Trigger: CCACGGCCCTGGCGTATACCACCACGGTGCCATCAT...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGATGATGGCACCGTaGTGGTATACGCCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPILMMAP*WYTPGP
Trigger: CGGCCCTGGCGTATACCACCACGGTGCCATCATCAG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGGCAGCAGGTGCAGGGTaGGCAGAGCCGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVAAGAG*AEPRAA
Trigger: GGCTGCCCGCGGCTCTGCCCACCCTGCACCTGCTGC...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGTTCCAAAGTGGGCCTaGGCACAGCCGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPVPKWA*AQPRAP
Trigger: AGGTGCCCTCGGCTGTGCCCAGGCCCACTTTGGAAC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCTGCTGGTTCCAAAGTaGGCCTGGGCACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPLLVPK*AWAQPR
Trigger: CCTCGGCTGTGCCCAGGCCCACTTTGGAACCAGCAG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGTAGGGTGTGAGTCATaGCCCTGGCCACATCAGGGG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIVGCES*PWPHQG
Trigger: CCCCTGATGTGGCCAGGGCCATGACTCACACCCTAC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGGGACACTGGAGACATaGGCGTGCTCTGTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIGTLET*ACSVWA
Trigger: AGCCCACACAGAGCACGCCCATGTCTCCAGTGTCCC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCTGGCACCTAGCCCCGTaGCATGAGGATGCACCACTG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIWHLAP*HEDAPL
Trigger: CAGTGGTGCATCCTCATGCCACGGGGCTAGGTGCCA...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGCAGCGGGTGCATCTTaGGCAGACATGGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIAAGAS*ADMGMG
Trigger: TCCCATCCCCATGTCTGCCCAAGATGCACCCGCTGC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573591.1
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCAATCCAGAACAGGTCTaGGCAGGGCACGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPINPEQV*AGHGAK
Trigger: CTTGGCCCCGTGCCCTGCCCAGACCTGTTCTGGATT...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574154.5
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTAGGTGGCAGCGACCTTaGGGAAGGGTGGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPRWQRP*GRVGVE
Trigger: TTCCACCCCCACCCTTCCCCAAGGTCGCTGCCACCT...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000574154.5
CDS-3UTR TCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCCTGTCGACCTGCCCTaGTTCTGGAGCTGCCTCACA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPPVDLP*FWSCLT
Trigger: TGTGAGGCAGCTCCAGAATCAGGGCAGGTCGACAGG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR TCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGGCCGTGGAATTGCCTaGGGAGCTATCGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIGRGIA*GAIVEE
Trigger: CTCTTCCACGATAGCTCCTCAGGCAATTCCACGGCC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR TCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGGTCTGTGCTGGGCCTaGTGTCAGGGCCGTGGAATT +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPGLCWA*CQGRGI
Trigger: AATTCCACGGCCCTGACATCAGGCCCAGCACAGACC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR TCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAACCAGGAAGCCCTCCTaGGCCAGCGTGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPTRKPS*ASVVGP
Trigger: GGGCCCCACCACGCTGGCTCAGGAGGGCTTCCTGGT...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTTGCCTGAGTAGGGTGTaGGTCATGGCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPCLSRV*VMALAT
Trigger: TGTGGCCAGGGCCATGACTCACACCCTACTCAGGCA...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTTGCCTGAGTAGGGTGTaGGTCATGGCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPCLSRV*VMALAT
Trigger: TGTGGCCAGGGCCATGACTCACACCCTACTCAGGCA...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR TCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGGGGCCACAGCTCAGTaGGGTCGAGAAGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPGATAQ*GREGVQ
Trigger: CTGAACTCCTTCTCGACCTCACTGAGCTGTGGCCCC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCAGCTTCCTGTCGACCTaGCCTGATTCTGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPISFLST*PDSGAA
Trigger: GGCAGCTCCAGAATCAGGGCAGGTCGACAGGAAGCT...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGCTGCGAAGCACAGCTaGCAGTTGTGGGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPAAKHS*QLWVGG
Trigger: GCCACCAACCCACAACTGGCAGCTGTGCTTCGCAGC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCACGGCGGCCAGGGCACTaGTCTCGGGGCTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPRRPGH*SRGSQQ
Trigger: CTGCTGTGAGCCCCGAGAGCAGTGCCCTGGCCGCCG...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCCTGGAGACATGGGCGTaGTCTGTGTGGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCLETWA*SVWAAT
Trigger: GGTGGCAGCCCACACAGAGCACGCCCATGTCTCCAG...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCGATAACTCTGCCTTCTaGCAGACCCACCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: RTEMPTVPWALPVLLRGADNSAF*QTHPHP
Trigger: AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATC...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCATTGCTGCTGTGTCTaGTCTGCTCCTGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIHCCCV*SAPAPM
Trigger: CATGGGGGCAGGAGCAGAGCAGACACAGCAGCAATG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCACCACACCCTGCGGGTaGACACTCCATTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPITTPCG*TLHCCC
Trigger: ACAGCAGCAATGGAGTGTGCACCCGCAGGGTGTGGT...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGTGGGAGCATGTGGCTaGAGGGCTGATGATGGCACC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPVGACG*RADDGT
Trigger: GGTGCCATCATCAGCCCTGCAGCCACATGCTCCCAC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000381550.8
ENST00000573591.1
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCAGCATCCACGACGTTaGCCCCGGCAACAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPQHPRR*PRQQAA
Trigger: AGCTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTATGATGGCACCGTGGTaGTATACGCCAGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPMMAPW*YTPGPW
Trigger: CCACGGCCCTGGCGTATACCACCACGGTGCCATCAT...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCGTTCCAAAGTGGGCCTaGGCACAGCCGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCVPKWA*AQPRAP
Trigger: AGGTGCCCTCGGCTGTGCCCAGGCCCACTTTGGAAC...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGTGAACAGGATGCCCTaGGGCACAGGTAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIVNRMP*GTGSCS
Trigger: AGAGCAGCTACCTGTGCCCCAGGGCATCCTGTTCAC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTTGTGAGTCATGGCCCTaGCCACATCAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPCESWP*PHQGSL
Trigger: CAGGGACCCCTGATGTGGCCAGGGCCATGACTCACA...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGTAGGGTGTGAGTCATaGCCCTGGCCACATCAGGGG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPVGCES*PWPHQG
Trigger: CCCCTGATGTGGCCAGGGCCATGACTCACACCCTAC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTTGGAGCAGGGTCCCTTaGCCACAAGTGCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPWSRVP*PQVLGC
Trigger: GCATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCA...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTTGGAGCAGGGTCCCTTaGCCACAAGTGCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPWSRVP*PQVLGC
Trigger: GCATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCA...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTAAGGGGCAGCAGGCATaGGGGACACTGGAGACATGG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPKGQQA*GTLETW
Trigger: CCATGTCTCCAGTGTCCCCCATGCCTGCTGCCCCTT...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTTGGCACCTAGCCCCGTaGCATGAGGATGCACCACTG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPWHLAP*HEDAPL
Trigger: CAGTGGTGCATCCTCATGCCACGGGGCTAGGTGCCA...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGGAGAAAGGGCTTCTTaGCAGCGGGTGCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIGERAS*QRVHLG
Trigger: CCCAAGATGCACCCGCTGCCAAGAAGCCCTTTCTCC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573591.1
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGACCTTGGGGAAGGGTaGGGGTGGAATCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIDLGEG*GWNPEQ
Trigger: CTGTTCTGGATTCCACCCCCACCCTTCCCCAAGGTC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000574154.5
CDS-3UTR TCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCTTGCTGCCAGATGCCTaGGTAGGGTGTGAGTCATGG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPILLPDA*VGCESW
Trigger: CCATGACTCACACCCTACTCAGGCATCTGGCAGCAA...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR TCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCAAGGAGGCTGCATGTaGGCCTGCCCCATTAGGACA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPQGGCM*ACPIRT
Trigger: TGTCCTAATGGGGCAGGCTCACATGCAGCCTCCTTG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCTGGAAGAGTCCTGGTaGCTCCGGGGGTTTAGAACC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPLEESW*LRGFRT
Trigger: GGTTCTAAACCCCCGGAGGCACCAGGACTCTTCCAG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTAGCTTCCTGTCGACCTaGCCTGATTCTGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPSFLST*PDSGAA
Trigger: GGCAGCTCCAGAATCAGGGCAGGTCGACAGGAAGCT...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCTGGGGCACAGGTAGCTaGTCTGCTGGTTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIWGTGS*SAGSKV
Trigger: CACTTTGGAACCAGCAGAGCAGCTACCTGTGCCCCA...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTTTTCGTTATTACCCCCGGAGCGCAGGGCTaGCTCCAACAGTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGSELSASPRPYCFFVITPGAQG*LQQCQQ
Trigger: CTGCTGGCACTGTTGGAGGCAGCCCTGCGCTCCGGG...GGTAATAACGAAAAAGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGATAACTCTGCCTTCTaGCAGACCCACCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIDNSAF*QTHPHP
Trigger: AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTCATTGCTGCTGTGTCTaGTCTGCTCCTGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPHCCCV*SAPAPM
Trigger: CATGGGGGCAGGAGCAGAGCAGACACAGCAGCAATG...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGGGTGCACACTCCATTaGTGCTGTGTCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGGCTLH*CCVCSA
Trigger: AGCAGAGCAGACACAGCAGCAATGGAGTGTGCACCC...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGGGTGCACACTCCATTaGTGCTGTGTCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIGCTLH*CCVCSA
Trigger: AGCAGAGCAGACACAGCAGCAATGGAGTGTGCACCC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTACCACACCCTGCGGGTaGACACTCCATTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPTTPCG*TLHCCC
Trigger: ACAGCAGCAATGGAGTGTGCACCCGCAGGGTGTGGT...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCCTAGGCAGAGGCTCTaGACTCTTTCCACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIPRQRL*TLSTVL
Trigger: GAGGACAGTGGAAAGAGTGCAGAGCCTCTGCCTAGG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCACTGCCAGGCACAATaGAGCTCCAACTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIHCQAQ*SSNSSI
Trigger: GATGCTGGAGTTGGAGCTGCATTGTGCCTGGCAGTG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGATGAGGATGCACCACTaGCAGGCACAATGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGMRMHH*QAQCSS
Trigger: GGAGCTGCATTGTGCCTGGCAGTGGTGCATCCTCAT...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCATGAGGATGCACCACTaGCAGGCACAATGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIMRMHH*QAQCSS
Trigger: GGAGCTGCATTGTGCCTGGCAGTGGTGCATCCTCAT...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCTTCTTGGCAGCGGGTaGATCTTGGGCAGACATGGG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPLLGSG*ILGRHG
Trigger: CCCATGTCTGCCCAAGATGCACCCGCTGCCAAGAAG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573591.1
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCTTCCTGGAAGAGTCCTaGTGCCTCCGGGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIFLEES*CLRGFR
Trigger: TCTAAACCCCCGGAGGCACCAGGACTCTTCCAGGAA...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR CCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCACCAGTTGTGGGTTGGTaGCTCGGGCCCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPPVVGW*LGPQRP
Trigger: TGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGG...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTTTTCGTTATTACCCCAGTTGTGGGTTGGTaGCTCGGGCCCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: AGSELSASPRPYCFFVITPVVGW*LGPQRP
Trigger: TGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGG...GGTAATAACGAAAAAGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGTGAACAGGATGCCCTaGGGCACAGGTAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPVNRMP*GTGSCS
Trigger: AGAGCAGCTACCTGTGCCCCAGGGCATCCTGTTCAC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCAAGGGGCAGCAGGCATaGGGGACACTGGAGACATGG +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCKGQQA*GTLETW
Trigger: CCATGTCTCCAGTGTCCCCCATGCCTGCTGCCCCTT...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTAGCCTCCCAAGCAGCTaGGACAACAGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPSLPSS*DNRHVP
Trigger: TGGCACATGCCTGTTGTCCCAGCTGCTTGGGAGGCT...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR CCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGGCCTGTCCTGCTTCGTaGGGCCCAGGGCCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVACPAS*GPGPRQ
Trigger: CTGCCTAGGCCCTGGGCCCCACGAAGCAGGACAGGC...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGATGCCAACAGTACCCTaGGCTCTGCCTGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGMPTVP*ALPVLL
Trigger: AAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCAT...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTTTGCTGCCAGATGCCTaGGTAGGGTGTGAGTCATGG +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPLLPDA*VGCESW
Trigger: CCATGACTCACACCCTACTCAGGCATCTGGCAGCAA...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTTTGCTGCCAGATGCCTaGGTAGGGTGTGAGTCATGG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPLLPDA*VGCESW
Trigger: CCATGACTCACACCCTACTCAGGCATCTGGCAGCAA...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR TCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGCCTAGCCCCGTGGCATaGGGATGCACCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVPSPVA*GCTTAR
Trigger: CCTGGCAGTGGTGCATCCTCATGCCACGGGGCTAGG...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTTTTCGTTATTACCCCCAGCCCTCCTGCCTaGCAGCCTTTCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: AGSELSASPRPYCFFVITPSPPA*QPFRLC
Trigger: ACACAGCCGGAAAGGCTGGCAGGCAGGAGGGCTGGG...GGTAATAACGAAAAAGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTCCAAAACATGGCACCTaGAGGGCTGATGATGGCACC +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPPKHGT*RADDGT
Trigger: GGTGCCATCATCAGCCCTGCAGGTGCCATGTTTTGG...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301395.7
CDS-3UTR GCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTTCAGGGCCGTGGAATTaGCTGAGGAGCTATCGTGGA +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPSGPWN*LRSYRG
Trigger: TCCACGATAGCTCCTCAGGCAATTCCACGGCCCTGA...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTTCAGGGCCGTGGAATTaGCTGAGGAGCTATCGTGGA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPSGPWN*LRSYRG
Trigger: TCCACGATAGCTCCTCAGGCAATTCCACGGCCCTGA...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTTTTCGTTATTACCCAGGCGGCCGAAGCGTaGATGCAGCAGGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: AGSELSASPRPYCFFVITQAAEA*MQQVQG
Trigger: ACCCTGCACCTGCTGCATGCACGCTTCGGCCGCCTG...GGTAATAACGAAAAAGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTTGGGGCACAGGTAGCTaGTCTGCTGGTTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPWGTGS*SAGSKV
Trigger: CACTTTGGAACCAGCAGAGCAGCTACCTGTGCCCCA...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGGGTGCACACTCCATTaGTGCTGTGTCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPGCTLH*CCVCSA
Trigger: AGCAGAGCAGACACAGCAGCAATGGAGTGTGCACCC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGTGATCCTAGCTCTCTaGAGCCTTGAACTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIVILAL*SLELLS
Trigger: GCTCAGGAGTTCAAGGCTGCAGAGAGCTAGGATCAC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR GCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGTGATCCTAGCTCTCTaGAGCCTTGAACTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGVILAL*SLELLS
Trigger: GCTCAGGAGTTCAAGGCTGCAGAGAGCTAGGATCAC...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCACTGCCAGGCACAATaGAGCTCCAACTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPHCQAQ*SSNSSI
Trigger: GATGCTGGAGTTGGAGCTGCATTGTGCCTGGCAGTG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTATGAGGATGCACCACTaGCAGGCACAATGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPMRMHH*QAQCSS
Trigger: GGAGCTGCATTGTGCCTGGCAGTGGTGCATCCTCAT...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTTTCCTGGAAGAGTCCTaGTGCCTCCGGGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPFLEES*CLRGFR
Trigger: TCTAAACCCCCGGAGGCACCAGGACTCTTCCAGGAA...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCCTGAGGAGCTATCGTaGAAGAGGCCCCAAAACATG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIPEELS*KRPQNM
Trigger: CATGTTTTGGGGCCTCTTCCACGATAGCTCCTCAGG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGATGTCAGGGCCGTaGAATTGCCTGAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPILMSGP*NCLRSY
Trigger: ATAGCTCCTCAGGCAATTCCACGGCCCTGACATCAG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGGTGTCCCATCAGCATaGCAAAGTAGTGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: APAPMLQITLPSARPTPIGVPSA*QSSGQR
Trigger: CCTCTGTCCACTACTTTGCCATGCTGATGGGACACC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCGTGAACAGGATGCCCTaGGGCACAGGTAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCVNRMP*GTGSCS
Trigger: AGAGCAGCTACCTGTGCCCCAGGGCATCCTGTTCAC...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGTGTGGGCTGCCACCTaGAGCAGGGTCCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPVWAAT*SRVPWP
Trigger: TGGCCAAGGGACCCTGCTCCAGGTGGCAGCCCACAC...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTATGCCAACAGTACCCTaGGCTCTGCCTGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPMPTVP*ALPVLL
Trigger: AAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCAT...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTCAGGGCCGTGGAATTaGCTGAGGAGCTATCGTGGA +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCSGPWN*LRSYRG
Trigger: TCCACGATAGCTCCTCAGGCAATTCCACGGCCCTGA...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTTTTCGTTATTACCAGCCACCAGAGCCCTTaGCAGGGGTGTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: AGSELSASPRPYCFFVITSHQSP*QGCVHQ
Trigger: CTGGTGGACACACCCCTGGCAAGGGCTCTGGTGGCT...GGTAATAACGAAAAAGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGGGCTGCCTCCAACAGTaGCAGCAGTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVGCLQQ*QQFWAS
Trigger: GCTGGCCCAGAACTGCTGGCACTGTTGGAGGCAGCC...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCGATAACTCTGCCTTCTaGCAGACCCACCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCDNSAF*QTHPHP
Trigger: AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATC...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGAGCCCCAGGCCCTACTaGTTTTTCGTTATTACCCTG +
Preference number: 4 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGSPRPY*FFVITL
Trigger: CAGGGTAATAACGAAAAAGCAGTAGGGCCTGGGGCT...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCCTGAGGAGCTATCGTaGAAGAGGCCCCAAAACATG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPPEELS*KRPQNM
Trigger: CATGTTTTGGGGCCTCTTCCACGATAGCTCCTCAGG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCTGATGTCAGGGCCGTaGAATTGCCTGAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPLMSGP*NCLRSY
Trigger: ATAGCTCCTCAGGCAATTCCACGGCCCTGACATCAG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGGTGTCCCATCAGCATaGCAAAGTAGTGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPGVPSA*QSSGQR
Trigger: CCTCTGTCCACTACTTTGCCATGCTGATGGGACACC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGTTCCAAAGTGGGCCTaGGCACAGCCGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPVPKWA*AQPRAP
Trigger: AGGTGCCCTCGGCTGTGCCCAGGCCCACTTTGGAAC...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGCTGCTGGTTCCAAAGTaGGCCTGGGCACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVLLVPK*AWAQPR
Trigger: CCTCGGCTGTGCCCAGGCCCACTTTGGAACCAGCAG...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGCAATGGTGCGATCTTaGTTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPAMVRS*FTATST
Trigger: GGTGGAGGTTGCAGTGAACCAAGATCGCACCATTGC...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGCAATGGTGCGATCTTaGTTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPAMVRS*FTATST
Trigger: GGTGGAGGTTGCAGTGAACCAAGATCGCACCATTGC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR TCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCATGCCTGAGTAGGGTGTaGGTCATGGCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPCLSRV*VMALAT
Trigger: TGTGGCCAGGGCCATGACTCACACCCTACTCAGGCA...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGCCGGTGTGGGTGATCTaGAGAATGATTGTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGPVWVI*RMIVSS
Trigger: AGAGCTAACAATCATTCTTCAGATCACCCACACCGG...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCAGGTTTCCGGGAGACTTaGTCTTTATTTTGTACCCAG +
Preference number: 4 (lower is better)
Translates to: DRDANSTLGSACPASWGPGFRET*SLFCTQ
Trigger: CTGGGTACAAAATAAAGATCAAGTCTCCCGGAAACC...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTTTTCGTTATTACCGCTGCGAAGCACAGCTaGCAGTTGTGGGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: AGSELSASPRPYCFFVITAAKHS*QLWVGG
Trigger: GCCACCAACCCACAACTGGCAGCTGTGCTTCGCAGC...GGTAATAACGAAAAAGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTGGAGCACAGAGCCGCTaGTGTCCACGGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCGAQSR*CPRRPG
Trigger: CCCTGGCCGCCGTGGACAGCAGCGGCTCTGTGCTCC...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTGGGGTTGCAATGGTaGGATCTTGGTTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPVGLQW*DLGSLQ
Trigger: TTGCAGTGAACCAAGATCGCACCATTGCAACCCCAC...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGTGGGGTTGCAATGGTaGGATCTTGGTTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPVGLQW*DLGSLQ
Trigger: TTGCAGTGAACCAAGATCGCACCATTGCAACCCCAC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR GCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGCAGCATCCACGACGTTaGCCCCGGCAACAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVQHPRR*PRQQAA
Trigger: AGCTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTG...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381550.8
CDS-3UTR CCA 90 bp GCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTTTTCGTTATTACCCGCCAGCCTTGTTCCTaGAAGAGTCCTGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: AGSELSASPRPYCFFVITRQPCS*KSPGAS
Trigger: GGAGGCACCAGGACTCTTCCAGGAACAAGGCTGGCG...GGTAATAACGAAAAAGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGATGATGGCACCGTGGTaGTATACGCCAGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVMMAPW*YTPGPW
Trigger: CCACGGCCCTGGCGTATACCACCACGGTGCCATCAT...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCCCTGAGGAGCTATCGTaGAAGAGGCCCCAAAACATG +
Preference number: 4 (lower is better)
Translates to: TVLLKAGSELSASPRPYCPEELS*KRPQNM
Trigger: CATGTTTTGGGGCCTCTTCCACGATAGCTCCTCAGG...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGGGGACACTGGAGACATaGGCGTGCTCTGTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVGTLET*ACSVWA
Trigger: AGCCCACACAGAGCACGCCCATGTCTCCAGTGTCCC...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAAAGGGGCAGCAGGCATaGGGGACACTGGAGACATGG +
Preference number: 4 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPKGQQA*GTLETW
Trigger: CCATGTCTCCAGTGTCCCCCATGCCTGCTGCCCCTT...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGGCCTGAGCCAGCAGTaGGCACATAATAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPGLSQQ*AHNKSF
Trigger: AAAGGATTTATTATGTGCTCACTGCTGGCTCAGGCC...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTTTTCCACTGTCCTCCTaGAAGCTGGATCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPFPLSS*KLDLNS
Trigger: TGAGTTCAGATCCAGCTTTCAGGAGGACAGTGGAAA...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTTTTCCACTGTCCTCCTaGAAGCTGGATCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPFPLSS*KLDLNS
Trigger: TGAGTTCAGATCCAGCTTTCAGGAGGACAGTGGAAA...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTTCGCCCCAGCCCTCCTaGCTGCCAGCCTTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCSPQPS*LPAFPA
Trigger: AGCCGGAAAGGCTGGCAGGCAGGAGGGCTGGGGCGA...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTTTTCGTTATTACCAGCTTCCTGTCGACCTaGCCTGATTCTGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: AGSELSASPRPYCFFVITSFLST*PDSGAA
Trigger: GGCAGCTCCAGAATCAGGGCAGGTCGACAGGAAGCT...GGTAATAACGAAAAAGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTTTTCGTTATTACCACCACACCCTGCGGGTaGACACTCCATTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: AGSELSASPRPYCFFVITTTPCG*TLHCCC
Trigger: ACAGCAGCAATGGAGTGTGCACCCGCAGGGTGTGGT...GGTAATAACGAAAAAGCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTGCCTGTCCTGCTTCGTaGGGCCCAGGGCCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCACPAS*GPGPRQ
Trigger: CTGCCTAGGCCCTGGGCCCCACGAAGCAGGACAGGC...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGGTTTCCGGGAGACTTaGTCTTTATTTTGTACCCAG +
Preference number: 4 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPGFRET*SLFCTQ
Trigger: CTGGGTACAAAATAAAGATCAAGTCTCCCGGAAACC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCACCTAGGCAGAGGCTCTaGACTCTTTCCACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPPRQRL*TLSTVL
Trigger: GAGGACAGTGGAAAGAGTGCAGAGCCTCTGCCTAGG...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGCACTGCCAGGCACAATaGAGCTCCAACTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVHCQAQ*SSNSSI
Trigger: GATGCTGGAGTTGGAGCTGCATTGTGCCTGGCAGTG...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381550.8
CDS-3UTR CCA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGATTTTGTACCCAGTCTaGTTGAGGCAGATAGGTAAG +
Preference number: 4 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGILYPV*LRQIGK
Trigger: CTTACCTATCTGCCTCAACCAGACTGGGTACAAAAT...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTGAGCGAGGGCTGCGCTaGGAAGCACAGCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCERGLR*EAQLPV
Trigger: AACTGGCAGCTGTGCTTCGCAGCGCAGCCCTCGCTC...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTGGCTGCCTCCAACAGTaGCAGCAGTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCGCLQQ*QQFWAS
Trigger: GCTGGCCCAGAACTGCTGGCACTGTTGGAGGCAGCC...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCACCTGAGGAGCTATCGTaGAAGAGGCCCCAAAACATG +
Preference number: 4 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPPEELS*KRPQNM
Trigger: CATGTTTTGGGGCCTCTTCCACGATAGCTCCTCAGG...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCACTGATGTCAGGGCCGTaGAATTGCCTGAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPLMSGP*NCLRSY
Trigger: ATAGCTCCTCAGGCAATTCCACGGCCCTGACATCAG...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTCTGCTGGTTCCAAAGTaGGCCTGGGCACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCLLVPK*AWAQPR
Trigger: CCTCGGCTGTGCCCAGGCCCACTTTGGAACCAGCAG...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAATGGTGCGATCTTaGTTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPAMVRS*FTATST
Trigger: GGTGGAGGTTGCAGTGAACCAAGATCGCACCATTGC...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTATTTTGTACCCAGTCTaGTTGAGGCAGATAGGTAAG +
Preference number: 4 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPILYPV*LRQIGK
Trigger: CTTACCTATCTGCCTCAACCAGACTGGGTACAAAAT...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTCCTGTCGACCTGCCCTaGTTCTGGAGCTGCCTCACA +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCPVDLP*FWSCLT
Trigger: TGTGAGGCAGCTCCAGAATCAGGGCAGGTCGACAGG...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTGCTGCGAAGCACAGCTaGCAGTTGTGGGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCAAKHS*QLWVGG
Trigger: GCCACCAACCCACAACTGGCAGCTGTGCTTCGCAGC...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGAGCCCCAGGCCCTACTaGTTTTTCGTTATTACCCTG +
Preference number: 4 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVSPRPY*FFVITL
Trigger: CAGGGTAATAACGAAAAAGCAGTAGGGCCTGGGGCT...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTCTGATGATGGCACCGTaGTGGTATACGCCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCLMMAP*WYTPGP
Trigger: CGGCCCTGGCGTATACCACCACGGTGCCATCATCAG...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTTGTGAGTCATGGCCCTaGCCACATCAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCCESWP*PHQGSL
Trigger: CAGGGACCCCTGATGTGGCCAGGGCCATGACTCACA...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTGGGACACTGGAGACATaGGCGTGCTCTGTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCGTLET*ACSVWA
Trigger: AGCCCACACAGAGCACGCCCATGTCTCCAGTGTCCC...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGGCCTGAGCCAGCAGTaGGCACATAATAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPGLSQQ*AHNKSF
Trigger: AAAGGATTTATTATGTGCTCACTGCTGGCTCAGGCC...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR TCA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGCCGGTGTGGGTGATCTaGAGAATGATTGTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVPVWVI*RMIVSS
Trigger: AGAGCTAACAATCATTCTTCAGATCACCCACACCGG...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTCTGGAAGAGTCCTGGTaGCTCCGGGGGTTTAGAACC +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCLEESW*LRGFRT
Trigger: GGTTCTAAACCCCCGGAGGCACCAGGACTCTTCCAG...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR GCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTCATTGCTGCTGTGTCTaGTCTGCTCCTGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCHCCCV*SAPAPM
Trigger: CATGGGGGCAGGAGCAGAGCAGACACAGCAGCAATG...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTGTGAACAGGATGCCCTaGGGCACAGGTAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCVNRMP*GTGSCS
Trigger: AGAGCAGCTACCTGTGCCCCAGGGCATCCTGTTCAC...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
3UTR CAA 72 bp CCGGGAGACTTGATCTTTATTTTGTACCCAGTCTGGTaGAGGCAGATAGGTAAGGGGTGTCCTGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PGDLIFILYPVW*RQIGKGCPEGK
Trigger: CTTCCCTTCAGGACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTCTCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CCA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTTTCCTGGAAGAGTCCTaGTGCCTCCGGGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCFLEES*CLRGFR
Trigger: TCTAAACCCCCGGAGGCACCAGGACTCTTCCAGGAA...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS CCA 90 bp CCCTTGCCAGGGGTGTGTCCACCAGGAAGCCCTCCTGAGCCAGCGTaGTGGGGCCCACTAGCAGGCGTGGCCAGGGCAGGCGGCCGAAGC +
Preference number: 5 (lower is better)
Translates to: PLPGVCPPGSPPEPA*WGPLAGVARAGGRS
Trigger: GCTTCGGCCGCCTGCCCTGGCCACGCCTGCTAGTGGGCCCCACCACGCTGGCTCAGGAGGGCTTCCTGGTGGACACACCCCTGGCAAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS TCA 90 bp GCCACCAGAGCCCTTGCCAGGGGTGTGTCCACCAGGAAGCCCTCCTaGGCCAGCGTGGTGGGGCCCACTAGCAGGCGTGGCCAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ATRALARGVSTRKPS*ASVVGPTSRRGQGR
Trigger: CCTGCCCTGGCCACGCCTGCTAGTGGGCCCCACCACGCTGGCTCAGGAGGGCTTCCTGGTGGACACACCCCTGGCAAGGGCTCTGGTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 90 bp TTGCCAGGGGTGTGTCCACCAGGAAGCCCTCCTGAGCCAGCGTGGTaGGGCCCACTAGCAGGCGTGGCCAGGGCAGGCGGCCGAAGCGTG +
Preference number: 5 (lower is better)
Translates to: LPGVCPPGSPPEPAW*GPLAGVARAGGRSV
Trigger: CACGCTTCGGCCGCCTGCCCTGGCCACGCCTGCTAGTGGGCCCCACCACGCTGGCTCAGGAGGGCTTCCTGGTGGACACACCCCTGGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 90 bp TGGGAGCGAGGGCTGCGCTGCGAAGCACAGCTGCCAGTTGTGGGTTaGTGGCTCGGGCCCCAGCGCCCAGGGGTGTCCCATCAGCATGGC +
Preference number: 5 (lower is better)
Translates to: WERGLRCEAQLPVVG*WLGPQRPGVSHQHG
Trigger: GCCATGCTGATGGGACACCCCTGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAGCTGTGCTTCGCAGCGCAGCCCTCGCTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 90 bp GGCACCGTGGTGGTATACGCCAGGGCCGTGGGAGTGTCCGCCGGGTaGAGGGGCCACAGAGCCCAAGCTTCCTGTCGACCTGCCCTGATT +
Preference number: 5 (lower is better)
Translates to: GTVVVYARAVGVSAG*RGHRAQASCRPALI
Trigger: AATCAGGGCAGGTCGACAGGAAGCTTGGGCTCTGTGGCCCCTCCACCCGGCGGACACTCCCACGGCCCTGGCGTATACCACCACGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
ENST00000574584.1
ENST00000575573.1
CDS CCA 90 bp CCTGCAGGGCTGATGATGGCACCGTGGTGGTATACGCCAGGGCCGTaGGAGTGTCCGCCGGGTGGAGGGGCCACAGAGCCCAAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: PAGLMMAPWWYTPGP*ECPPGGGATEPKLP
Trigger: AGGAAGCTTGGGCTCTGTGGCCCCTCCACCCGGCGGACACTCCCACGGCCCTGGCGTATACCACCACGGTGCCATCATCAGCCCTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000574154.5
ENST00000574584.1
ENST00000575573.1
CDS CCA 90 bp GAGCGAGGGCTGCGCTGCGAAGCACAGCTGCCAGTTGTGGGTTGGTaGCTCGGGCCCCAGCGCCCAGGGGTGTCCCATCAGCATGGCAAA +
Preference number: 5 (lower is better)
Translates to: ERGLRCEAQLPVVGW*LGPQRPGVSHQHGK
Trigger: TTTGCCATGCTGATGGGACACCCCTGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAGCTGTGCTTCGCAGCGCAGCCCTCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 90 bp GCTGCAGGGCTGATGATGGCACCGTGGTGGTATACGCCAGGGCCGTaGGAGTGTCCGCCGGGTGGAGGGGCCACAGAGCCCAAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: AAGLMMAPWWYTPGP*ECPPGGGATEPKLP
Trigger: AGGAAGCTTGGGCTCTGTGGCCCCTCCACCCGGCGGACACTCCCACGGCCCTGGCGTATACCACCACGGTGCCATCATCAGCCCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381550.8
ENST00000573591.1
CDS-3UTR CAA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGCTGCCAGTTGTGGGTaGGTGGCTCGGGCCCCAGCG +
Preference number: 5 (lower is better)
Translates to: APAPMLQITLPSARPTPIAASCG*VARAPA
Trigger: CGCTGGGGCCCGAGCCACCAACCCACAACTGGCAGC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCCTCCGACTCCAAGCTaGGCTCCCAGGGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAPPTPS*APRAAA
Trigger: AGCTGCTGCCCTGGGAGCCAAGCTTGGAGTCGGAGG...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCAGGCAGCCCGCCAGCCTaGTTCCTGGAAGAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: DRDANSTLGSACPASWGPGSPPA*FLEESW
Trigger: CCAGGACTCTTCCAGGAACAAGGCTGGCGGGCTGCC...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS GCA 90 bp CCACTGCCAGGCACAATGCAGCTCCAACTCCAGCATCCACGACGTTaGCCCCGGCAACAAGCAGCTCTCGGCCTAGGTGGGAGCATGTGG +
Preference number: 5 (lower is better)
Translates to: PLPGTMQLQLQHPRR*PRQQAALGLGGSMW
Trigger: CCACATGCTCCCACCTAGGCCGAGAGCTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTGGAGTTGGAGCTGCATTGTGCCTGGCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381550.8
ENST00000573591.1
CDS CCA 90 bp CTCCCGCCAGTAGACTCAGTAGAGCATCCCCAGCAAGGTCTGAGGTaGGAGCGAGGGCTGCGCTGCGAAGCACAGCTGCCAGTTGTGGGT +
Preference number: 5 (lower is better)
Translates to: LPPVDSVEHPQQGLR*ERGLRCEAQLPVVG
Trigger: ACCCACAACTGGCAGCTGTGCTTCGCAGCGCAGCCCTCGCTCCCACCTCAGACCTTGCTGGGGATGCTCTACTGAGTCTACTGGCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 90 bp CACCTGGAGCAGGGTCCCTTGGCCACAAGTGCTGGGATGCTCTGTTaGTTCTTGCTGACCCTGATGCTGGTGCTGGGCCTGGGTAGGGGG +
Preference number: 5 (lower is better)
Translates to: HLEQGPLATSAGMLC*FLLTLMLVLGLGRG
Trigger: CCCCCTACCCAGGCCCAGCACCAGCATCAGGGTCAGCAAGAACCAACAGAGCATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCCTCCGACTCCAAGCTaGGCTCCCAGGGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: APAPMLQITLPSARPTPIPPTPS*APRAAA
Trigger: AGCTGCTGCCCTGGGAGCCAAGCTTGGAGTCGGAGG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR CAA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGAGCCACCAGAGCCCTaGCCAGGGGTGTGTCCACCA +
Preference number: 5 (lower is better)
Translates to: APAPMLQITLPSARPTPIEPPEP*PGVCPP
Trigger: TGGTGGACACACCCCTGGCAAGGGCTCTGGTGGCTC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCTGGAGCAGGGTCCCTaGGCCACAAGTGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: RTEMPTVPWALPVLLRGALEQGP*ATSAGM
Trigger: CATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCAG...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCCAGCATCCACGACGTaGCCCCCGGCAACAAGCAGC +
Preference number: 5 (lower is better)
Translates to: APAPMLQITLPSARPTPIPASTT*PPATSS
Trigger: GCTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTGG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGGCAGCGGGTGCATCTaGGGCAGACATGGGGATGGG +
Preference number: 5 (lower is better)
Translates to: APAPMLQITLPSARPTPIGSGCI*GRHGDG
Trigger: CCCATCCCCATGTCTGCCCAAGATGCACCCGCTGCC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573591.1
CDS-3UTR CAA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGAGGTGGCAGCGACCTaGGGGAAGGGTGGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPEVAAT*GKGGGG
Trigger: TCCACCCCCACCCTTCCCCAAGGTCGCTGCCACCTC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000574154.5
CDS CCA 90 bp CTGTGTGGGCTGCCACCTGGAGCAGGGTCCCTTGGCCACAAGTGCTaGGATGCTCTGTTGGTTCTTGCTGACCCTGATGCTGGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LCGLPPGAGSLGHKC*DALLVLADPDAGAG
Trigger: CCCAGCACCAGCATCAGGGTCAGCAAGAACCAACAGAGCATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCAGGTGGCAGCCCACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 90 bp GCATCCACGACGTTGCCCCCGGCAACAAGCAGCTCTCGGCCTAGGTaGGAGCATGTGGCTGCAGCAAGGAAGGCACTGTCATGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: ASTTLPPATSSSRPR*EHVAAARKALSCSK
Trigger: CTTGCTGCATGACAGTGCCTTCCTTGCTGCAGCCACATGCTCCCACCTAGGCCGAGAGCTGCTTGTTGCCGGGGGCAACGTCGTGGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575573.1
CDS-3UTR CAA 90 bp AGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCGTCAGGGCCGTGGAATaGCCTGAGGAGCTATCGTGG +
Preference number: 5 (lower is better)
Translates to: RTEMPTVPWALPVLLRGAVRAVE*PEELSW
Trigger: CCACGATAGCTCCTCAGGCAATTCCACGGCCCTGAC...GGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGAGCCACCAGAGCCCTaGCCAGGGGTGTGTCCACCA +
Preference number: 5 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPEPPEP*PGVCPP
Trigger: TGGTGGACACACCCCTGGCAAGGGCTCTGGTGGCTC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGGAGCAGGGTCCCTaGGCCACAAGTGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: APAPMLQITLPSARPTPILEQGP*ATSAGM
Trigger: CATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCAG...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS GCA 90 bp GCTCTGTGTGGGCTGCCACCTGGAGCAGGGTCCCTTGGCCACAAGTaGTGGGATGCTCTGTTGGTTCTTGCTGACCCTGATGCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: ALCGLPPGAGSLGHK*WDALLVLADPDAGA
Trigger: AGCACCAGCATCAGGGTCAGCAAGAACCAACAGAGCATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCAGGTGGCAGCCCACACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCCCTCCGACTCCAAGCTaGGCTCCCAGGGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TVLLKAGSELSASPRPYCPPTPS*APRAAA
Trigger: AGCTGCTGCCCTGGGAGCCAAGCTTGGAGTCGGAGG...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGTCAGGGCCGTGGAATaGCCTGAGGAGCTATCGTGG +
Preference number: 5 (lower is better)
Translates to: APAPMLQITLPSARPTPIVRAVE*PEELSW
Trigger: CCACGATAGCTCCTCAGGCAATTCCACGGCCCTGAC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGCAGAACCCCAGTGCTaGGGGACAGGTGTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPAEPQC*GTGVQS
Trigger: GCTCTGCACACCTGTCCCCAAGCACTGGGGTTCTGC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTCTGGAGCAGGGTCCCTaGGCCACAAGTGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPLEQGP*ATSAGM
Trigger: CATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCAG...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGACAGGGTTTCCCTCTaGTTGCCCAGGTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGDRVSL*LPRWGC
Trigger: GCAACCCCACCTGGGCAACAAGAGGGAAACCCTGTC...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS CCA 90 bp GCTGGGCCTGATGTCAGGGCCGTGGAATTGCCTGAGGAGCTATCGTaGAAGAGGCCCCAAAACATGGCACCTGCAGGGCTGATGATGGCA +
Preference number: 5 (lower is better)
Translates to: AGPDVRAVELPEELS*KRPQNMAPAGLMMA
Trigger: TGCCATCATCAGCCCTGCAGGTGCCATGTTTTGGGGCCTCTTCCACGATAGCTCCTCAGGCAATTCCACGGCCCTGACATCAGGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301395.7
CDS-3UTR CAA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCTGCCAGTTGTGGGTaGGTGGCTCGGGCCCCAGCG +
Preference number: 5 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPAASCG*VARAPA
Trigger: CGCTGGGGCCCGAGCCACCAACCCACAACTGGCAGC...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGCACTAGTGGTAGACTaGGCCACCAGGTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: APAPMLQITLPSARPTPIALVVD*ATRLLS
Trigger: GCTCAGCAACCTGGTGGCCAAGTCTACCACTAGTGC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTGACAGGGTTTCCCTCTaGTTGCCCAGGTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPDRVSL*LPRWGC
Trigger: GCAACCCCACCTGGGCAACAAGAGGGAAACCCTGTC...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR CAA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCAGGAGAAAGGGCTTCTaGGCAGCGGGTGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: APAPMLQITLPSARPTPIRRKGF*AAGASW
Trigger: CCAAGATGCACCCGCTGCCAAGAAGCCCTTTCTCCT...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573591.1
CDS CCA 90 bp AGTGGTAGACTTGGCCACCAGGTTGCTGAGCAGAACCCCAGTGCTTaGGGACAGGTGTGCAGAGCCAAAGGAGCAGTTGAGCGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: SGRLGHQVAEQNPSA*GQVCRAKGAVERGG
Trigger: ACCTCCTCGCTCAACTGCTCCTTTGGCTCTGCACACCTGTCCCCAAGCACTGGGGTTCTGCTCAGCAACCTGGTGGCCAAGTCTACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCGTCAGGGCCGTGGAATaGCCTGAGGAGCTATCGTGG +
Preference number: 5 (lower is better)
Translates to: TVLLKAGSELSASPRPYCVRAVE*PEELSW
Trigger: CCACGATAGCTCCTCAGGCAATTCCACGGCCCTGAC...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp AGGGGTGTCCTGAAGGGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGCACTAGTGGTAGACTaGGCCACCAGGTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RGVLKGRTEMPTVPWALPALVVD*ATRLLS
Trigger: GCTCAGCAACCTGGTGGCCAAGTCTACCACTAGTGC...AGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCCCTTCAGGACACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCAATGCTCTGTTGGTTCTaGCTGACCCTGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: DRDANSTLGSACPASWGPMLCWF*LTLMLV
Trigger: CACCAGCATCAGGGTCAGCAAGAACCAACAGAGCAT...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCAGGGTTTCCCTCTTGTaGCCCAGGTGGGGTTGCAAT +
Preference number: 5 (lower is better)
Translates to: APAPMLQITLPSARPTPIRVSLL*PRWGCN
Trigger: ATTGCAACCCCACCTGGGCAACAAGAGGGAAACCCT...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR CAA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGGGCAGCCCGCCAGCCTaGTTCCTGGAAGAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVGSPPA*FLEESW
Trigger: CCAGGACTCTTCCAGGAACAAGGCTGGCGGGCTGCC...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGAGCCACCAGAGCCCTaGCCAGGGGTGTGTCCACCA +
Preference number: 5 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPEPPEP*PGVCPP
Trigger: TGGTGGACACACCCCTGGCAAGGGCTCTGGTGGCTC...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCATGCTCTGTTGGTTCTaGCTGACCCTGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: APAPMLQITLPSARPTPIMLCWF*LTLMLV
Trigger: CACCAGCATCAGGGTCAGCAAGAACCAACAGAGCAT...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTAGGGTTTCCCTCTTGTaGCCCAGGTGGGGTTGCAAT +
Preference number: 5 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPRVSLL*PRWGCN
Trigger: ATTGCAACCCCACCTGGGCAACAAGAGGGAAACCCT...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
CDS-3UTR CAA 90 bp GGAAGGACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGTTGTACCCAGTCTGGTaGAGGCAGATAGGTAAGGGG +
Preference number: 5 (lower is better)
Translates to: GRTEMPTVPWALPVLLRGLYPVW*RQIGKG
Trigger: CCCCTTACCTATCTGCCTCAACCAGACTGGGTACAA...CCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp AACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCAGTGCCAGCATCCACGACGTaGCCCCCGGCAACAAGCAGC +
Preference number: 5 (lower is better)
Translates to: NSSLGNLKGQRLGPEPAVPASTT*PPATSS
Trigger: GCTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTGG...CACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381550.8
CDS-3UTR CAA 90 bp TCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCCTATGCTCTGTTGGTTCTaGCTGACCCTGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SCPHASDNSAFCQTHPHPMLCWF*LTLMLV
Trigger: CACCAGCATCAGGGTCAGCAAGAACCAACAGAGCAT...AGGATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS-3UTR CAA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCAGGGTTTCCCTCTTGTaGCCCAGGTGGGGTTGCAAT +
Preference number: 5 (lower is better)
Translates to: TVLLKAGSELSASPRPYCRVSLL*PRWGCN
Trigger: ATTGCAACCCCACCTGGGCAACAAGAGGGAAACCCT...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTGCTGCCAGTTGTGGGTaGGTGGCTCGGGCCCCAGCG +
Preference number: 5 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCAASCG*VARAPA
Trigger: CGCTGGGGCCCGAGCCACCAACCCACAACTGGCAGC...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp ACTGTCCTCCTGAAAGCTGGATCTGAACTCAGTGCTAGCCCCAGGCCCTACTGCTTGTACCCAGTCTGGTaGAGGCAGATAGGTAAGGGG +
Preference number: 5 (lower is better)
Translates to: TVLLKAGSELSASPRPYCLYPVW*RQIGKG
Trigger: CCCCTTACCTATCTGCCTCAACCAGACTGGGTACAA...GCAGTAGGGCCTGGGGCTAGCACTGAGTTCAGATCCAGCTTTCAGGAGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp TGCCAGAACTCAAGTCTAGGTAACTTAAAAGGCCAGAGGTTGGGGCCTGAGCCAGCACTAGTGGTAGACTaGGCCACCAGGTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: CQNSSLGNLKGQRLGPEPALVVD*ATRLLS
Trigger: GCTCAGCAACCTGGTGGCCAAGTCTACCACTAGTGC...TGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGACTTGAGTTCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp GACAGAGATGCCAACAGTACCCTGGGCTCTGCCTGTCCTGCTTCGTGGGGCCCAGACTTGATCTTTATTTaGTACCCAGTCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: DRDANSTLGSACPASWGPDLIFI*YPVWLR
Trigger: CCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC...TGGGCCCCACGAAGCAGGACAGGCAGAGCCCAGGGTACTGTTGGCATCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp GCTCCTGCCCCCATGCTTCAGATAACTCTGCCTTCTGCCAGACCCACCCCCATCGACTTGATCTTTATTTaGTACCCAGTCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: APAPMLQITLPSARPTPIDLIFI*YPVWLR
Trigger: CCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC...GATGGGGGTGGGTCTGGCAGAAGGCAGAGTTATCTGAAGCATGGGGGCAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTGCAGAACCCCAGTGCTaGGGGACAGGTGTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCAEPQC*GTGVQS
Trigger: GCTCTGCACACCTGTCCCCAAGCACTGGGGTTCTGC...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS-3UTR CAA 90 bp GACTTGATCTTTATTTTGTACCCAGTCTGGTTGAGGCAGATAGGTAAGGGGTGTCTGGAGCAGGGTCCCTaGGCCACAAGTGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: DLIFILYPVWLRQIGKGCLEQGP*ATSAGM
Trigger: CATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCAG...ACACCCCTTACCTATCTGCCTCAACCAGACTGGGTACAAAATAAAGATCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301395.7
ENST00000381550.8
CDS CCA 72 bp GGGCTGCGCTGCGAAGCACAGCTGCCAGTTGTGGGTTaGTGGCTCGGGCCCCAGCGCCCAGGGGTGTCCCAT +
Preference number: 6 (lower is better)
Translates to: GLRCEAQLPVVG*WLGPQRPGVSH
Trigger: ATGGGACACCCCTGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAGCTGTGCTTCGCAGCGCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 72 bp AGCGAGGGCTGCGCTGCGAAGCACAGCTGCCAGTTGTaGGTTGGTGGCTCGGGCCCCAGCGCCCAGGGGTGT +
Preference number: 6 (lower is better)
Translates to: SEGCAAKHSCQL*VGGSGPSAQGC
Trigger: ACACCCCTGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAGCTGTGCTTCGCAGCGCAGCCCTCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CAA 72 bp AGGGCTGCGCTGCGAAGCACAGCTGCCAGTTGTGGGTaGGTGGCTCGGGCCCCAGCGCCCAGGGGTGTCCCA +
Preference number: 6 (lower is better)
Translates to: RAALRSTAASCG*VARAPAPRGVP
Trigger: TGGGACACCCCTGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAGCTGTGCTTCGCAGCGCAGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CAA 90 bp GTGGGAGCGAGGGCTGCGCTGCGAAGCACAGCTGCCAGTTGTGGGTaGGTGGCTCGGGCCCCAGCGCCCAGGGGTGTCCCATCAGCATGG +
Preference number: 6 (lower is better)
Translates to: VGARAALRSTAASCG*VARAPAPRGVPSAW
Trigger: CCATGCTGATGGGACACCCCTGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAGCTGTGCTTCGCAGCGCAGCCCTCGCTCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 72 bp CTGATGATGGCACCGTGGTGGTATACGCCAGGGCCGTaGGAGTGTCCGCCGGGTGGAGGGGCCACAGAGCCC +
Preference number: 6 (lower is better)
Translates to: LMMAPWWYTPGP*ECPPGGGATEP
Trigger: GGGCTCTGTGGCCCCTCCACCCGGCGGACACTCCCACGGCCCTGGCGTATACCACCACGGTGCCATCATCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
ENST00000574584.1
ENST00000575573.1
CDS CCA 72 bp CTGCGCTGCGAAGCACAGCTGCCAGTTGTGGGTTGGTaGCTCGGGCCCCAGCGCCCAGGGGTGTCCCATCAG +
Preference number: 6 (lower is better)
Translates to: LRCEAQLPVVGW*LGPQRPGVSHQ
Trigger: CTGATGGGACACCCCTGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAGCTGTGCTTCGCAGCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 72 bp AGCTCTCGGCCTGCAGGGCTGATGATGGCACCGTGGTaGTATACGCCAGGGCCGTGGGAGTGTCCGCCGGGT +
Preference number: 6 (lower is better)
Translates to: SSRPAGLMMAPW*YTPGPWECPPG
Trigger: ACCCGGCGGACACTCCCACGGCCCTGGCGTATACCACCACGGTGCCATCATCAGCCCTGCAGGCCGAGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574154.5
ENST00000574584.1
CDS CCA 72 bp AGCAGCTCTCGGCCTGCAGGGCTGATGATGGCACCGTaGTGGTATACGCCAGGGCCGTGGGAGTGTCCGCCG +
Preference number: 6 (lower is better)
Translates to: SSSRPAGLMMAP*WYTPGPWECPP
Trigger: CGGCGGACACTCCCACGGCCCTGGCGTATACCACCACGGTGCCATCATCAGCCCTGCAGGCCGAGAGCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574154.5
ENST00000574584.1
CDS GCA 72 bp GGCACAATGCAGCTCCAACTCCAGCATCCACGACGTTaGCCCCGGCAACAAGCAGCTCTCGGCCTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: GTMQLQLQHPRR*PRQQAALGLQG
Trigger: GCCCTGCAGGCCGAGAGCTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTGGAGTTGGAGCTGCATTGTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574154.5
ENST00000574584.1
CDS CCA 72 bp AACATGGCACCTGCAGGGCTGATGATGGCACCGTGGTaGTATACGCCAGGGCCGTGGGAGTGTCCGCCGGGT +
Preference number: 6 (lower is better)
Translates to: NMAPAGLMMAPW*YTPGPWECPPG
Trigger: ACCCGGCGGACACTCCCACGGCCCTGGCGTATACCACCACGGTGCCATCATCAGCCCTGCAGGTGCCATGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301395.7
CDS CCA 72 bp CTGGAGACATGGGCGTGCTCTGTGTGGGCTGCCACCTaGAGCAGGGTCCCTTGGCCACAAGTGCTGGGATGC +
Preference number: 6 (lower is better)
Translates to: LETWACSVWAAT*SRVPWPQVLGC
Trigger: GCATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCAGGTGGCAGCCCACACAGAGCACGCCCATGTCTCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS GCA 72 bp GGCAGCCCGCCAGCCTTGTTCCTGGAAGAGTCCTGGTaGCTCCGGGGGTTTAGAACCAGCGCCTCTGATGTC +
Preference number: 6 (lower is better)
Translates to: GSPPALFLEESW*LRGFRTSASDV
Trigger: GACATCAGAGGCGCTGGTTCTAAACCCCCGGAGGCACCAGGACTCTTCCAGGAACAAGGCTGGCGGGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
ENST00000574584.1
ENST00000575573.1
CDS GCA 72 bp GGCACAATGCAGCTCCAACTCCAGCATCCACGACGTTaGCCCCGGCAACAAGCAGCTCTCGGCCTAGGTGGG +
Preference number: 6 (lower is better)
Translates to: GTMQLQLQHPRR*PRQQAALGLGG
Trigger: CCCACCTAGGCCGAGAGCTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTGGAGTTGGAGCTGCATTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381550.8
ENST00000573591.1
CDS CCA 72 bp CAAAACATGGCACCTGCAGGGCTGATGATGGCACCGTaGTGGTATACGCCAGGGCCGTGGGAGTGTCCGCCG +
Preference number: 6 (lower is better)
Translates to: QNMAPAGLMMAP*WYTPGPWECPP
Trigger: CGGCGGACACTCCCACGGCCCTGGCGTATACCACCACGGTGCCATCATCAGCCCTGCAGGTGCCATGTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301395.7
CDS CAA 72 bp AGGCACAATGCAGCTCCAACTCCAGCATCCACGACGTaGCCCCCGGCAACAAGCAGCTCTCGGCCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: RHNAAPTPASTT*PPATSSSRPAG
Trigger: CCCTGCAGGCCGAGAGCTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTGGAGTTGGAGCTGCATTGTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574154.5
ENST00000574584.1
CDS CAA 90 bp GAGCAGGGTCCCTTGGCCACAAGTGCTGGGATGCTCTGTTGGTTCTaGCTGACCCTGATGCTGGTGCTGGGCCTGGGTAGGGGGCCTTGC +
Preference number: 6 (lower is better)
Translates to: EQGPLATSAGMLCWF*LTLMLVLGLGRGPC
Trigger: GCAAGGCCCCCTACCCAGGCCCAGCACCAGCATCAGGGTCAGCAAGAACCAACAGAGCATCCCAGCACTTGTGGCCAAGGGACCCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CAA 90 bp GACATGGGCGTGCTCTGTGTGGGCTGCCACCTGGAGCAGGGTCCCTaGGCCACAAGTGCTGGGATGCTCTGTTGGTTCTTGCTGACCCTG +
Preference number: 6 (lower is better)
Translates to: DMGVLCVGCHLEQGP*ATSAGMLCWFLLTL
Trigger: CAGGGTCAGCAAGAACCAACAGAGCATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCAGGTGGCAGCCCACACAGAGCACGCCCATGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CAA 90 bp ACCACTGCCAGGCACAATGCAGCTCCAACTCCAGCATCCACGACGTaGCCCCCGGCAACAAGCAGCTCTCGGCCTAGGTGGGAGCATGTG +
Preference number: 6 (lower is better)
Translates to: TTARHNAAPTPASTT*PPATSSSRPRWEHV
Trigger: CACATGCTCCCACCTAGGCCGAGAGCTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTGGAGTTGGAGCTGCATTGTGCCTGGCAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381550.8
ENST00000573591.1
CDS CAA 90 bp ACCACTGCCAGGCACAATGCAGCTCCAACTCCAGCATCCACGACGTaGCCCCCGGCAACAAGCAGCTCTCGGCCTGCAGGGCTGATGATG +
Preference number: 6 (lower is better)
Translates to: TTARHNAAPTPASTT*PPATSSSRPAGLMM
Trigger: CATCATCAGCCCTGCAGGCCGAGAGCTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTGGAGTTGGAGCTGCATTGTGCCTGGCAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574154.5
ENST00000574584.1
CDS TCA 72 bp TGCTCTCGGGGCTCACAGCAGTCTAGCCCCGTGGCATaGGGATGCACCACTGCCAGGCACAATGCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: CSRGSQQSSPVA*GCTTARHNAAP
Trigger: TGGAGCTGCATTGTGCCTGGCAGTGGTGCATCCTCATGCCACGGGGCTAGACTGCTGTGAGCCCCGAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574584.1
CDS CCA 72 bp GTAGACTCAGTAGAGCATCCCCAGCAAGGTCTGAGGTaGGAGCGAGGGCTGCGCTGCGAAGCACAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: VDSVEHPQQGLR*ERGLRCEAQLP
Trigger: TGGCAGCTGTGCTTCGCAGCGCAGCCCTCGCTCCCACCTCAGACCTTGCTGGGGATGCTCTACTGAGTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 72 bp ACGTTGCCCCCGGCAACAAGCAGCTCTCGGCCTAGGTaGGAGCATGTGGCTGCAGCAAGGAAGGCACTGTCA +
Preference number: 6 (lower is better)
Translates to: TLPPATSSSRPR*EHVAAARKALS
Trigger: TGACAGTGCCTTCCTTGCTGCAGCCACATGCTCCCACCTAGGCCGAGAGCTGCTTGTTGCCGGGGGCAACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575573.1
CDS CAA 72 bp AGGCACAATGCAGCTCCAACTCCAGCATCCACGACGTaGCCCCCGGCAACAAGCAGCTCTCGGCCTAGGTGG +
Preference number: 6 (lower is better)
Translates to: RHNAAPTPASTT*PPATSSSRPRW
Trigger: CCACCTAGGCCGAGAGCTGCTTGTTGCCGGGGGCAACGTCGTGGATGCTGGAGTTGGAGCTGCATTGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381550.8
ENST00000573591.1
CDS CCA 72 bp CAGGGTCCCTTGGCCACAAGTGCTGGGATGCTCTGTTaGTTCTTGCTGACCCTGATGCTGGTGCTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: QGPLATSAGMLC*FLLTLMLVLGL
Trigger: CAGGCCCAGCACCAGCATCAGGGTCAGCAAGAACCAACAGAGCATCCCAGCACTTGTGGCCAAGGGACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 72 bp CGGCAACAAGCAGCTCTCGGCCTAGGTGGGAGCATGTaGCTGCAGCAAGGAAGGCACTGTCATGCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: RQQAALGLGGSM*LQQGRHCHAAR
Trigger: CCTTGCTGCATGACAGTGCCTTCCTTGCTGCAGCCACATGCTCCCACCTAGGCCGAGAGCTGCTTGTTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575573.1
CDS CAA 72 bp TCTCCTCCTCCTCCACTTCCTCCTCCGACTCCAAGCTaGGCTCCCAGGGCAGCAGCTTCTGATAGACCACGG +
Preference number: 6 (lower is better)
Translates to: SPPPPLPPPTPS*APRAAASDRPR
Trigger: CCGTGGTCTATCAGAAGCTGCTGCCCTGGGAGCCAAGCTTGGAGTCGGAGGAGGAAGTGGAGGAGGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
ENST00000574584.1
ENST00000575573.1
CDS CAA 72 bp AGGATGAGGGGGCAGGCCCAGGCACTAGTGGTAGACTaGGCCACCAGGTTGCTGAGCAGAACCCCAGTGCTT +
Preference number: 6 (lower is better)
Translates to: RMRGQAQALVVD*ATRLLSRTPVL
Trigger: AAGCACTGGGGTTCTGCTCAGCAACCTGGTGGCCAAGTCTACCACTAGTGCCTGGGCCTGCCCCCTCATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CAA 72 bp CCCTTGGCCACAAGTGCTGGGATGCTCTGTTGGTTCTaGCTGACCCTGATGCTGGTGCTGGGCCTGGGTAGG +
Preference number: 6 (lower is better)
Translates to: PLATSAGMLCWF*LTLMLVLGLGR
Trigger: CCTACCCAGGCCCAGCACCAGCATCAGGGTCAGCAAGAACCAACAGAGCATCCCAGCACTTGTGGCCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CAA 72 bp GCAGGGTCCCTTGGCCACAAGTGCTGGGATGCTCTGTaGGTTCTTGCTGACCCTGATGCTGGTGCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: AGSLGHKCWDAL*VLADPDAGAGP
Trigger: AGGCCCAGCACCAGCATCAGGGTCAGCAAGAACCAACAGAGCATCCCAGCACTTGTGGCCAAGGGACCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CAA 72 bp GTGCTCTGTGTGGGCTGCCACCTGGAGCAGGGTCCCTaGGCCACAAGTGCTGGGATGCTCTGTTGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: VLCVGCHLEQGP*ATSAGMLCWFL
Trigger: CAAGAACCAACAGAGCATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCAGGTGGCAGCCCACACAGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CAA 90 bp CCTCTGATGTCTCCTCCTCCTCCACTTCCTCCTCCGACTCCAAGCTaGGCTCCCAGGGCAGCAGCTTCTGATAGACCACGGGCTCTTCTG +
Preference number: 6 (lower is better)
Translates to: PLMSPPPPLPPPTPS*APRAAASDRPRALL
Trigger: CAGAAGAGCCCGTGGTCTATCAGAAGCTGCTGCCCTGGGAGCCAAGCTTGGAGTCGGAGGAGGAAGTGGAGGAGGAGGAGACATCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000574154.5
ENST00000574584.1
ENST00000575573.1
CDS GCA 72 bp GGGTCTGTGCTGGGCCTGATGTCAGGGCCGTGGAATTaGCTGAGGAGCTATCGTGGAAGAGGCCCCAAAACA +
Preference number: 6 (lower is better)
Translates to: GSVLGLMSGPWN*LRSYRGRGPKT
Trigger: TGTTTTGGGGCCTCTTCCACGATAGCTCCTCAGGCAATTCCACGGCCCTGACATCAGGCCCAGCACAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 72 bp GATGTCAGGGCCGTGGAATTGCCTGAGGAGCTATCGTaGAAGAGGCCCCAAAACATGGCACCTGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: DVRAVELPEELS*KRPQNMAPAGL
Trigger: CAGCCCTGCAGGTGCCATGTTTTGGGGCCTCTTCCACGATAGCTCCTCAGGCAATTCCACGGCCCTGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301395.7
CDS CCA 72 bp CTGCCACCTGGAGCAGGGTCCCTTGGCCACAAGTGCTaGGATGCTCTGTTGGTTCTTGCTGACCCTGATGCT +
Preference number: 6 (lower is better)
Translates to: LPPGAGSLGHKC*DALLVLADPDA
Trigger: AGCATCAGGGTCAGCAAGAACCAACAGAGCATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCAGGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301395.7
ENST00000381550.8
ENST00000573591.1
ENST00000574154.5
CDS CCA 72 bp AGAGGAGCACAAGTCAGCCAAGGAGAAAGGGCTTCTTaGCAGCGGGTGCATCTTGGGCAGACATGGGGATGG +
Preference number: 6 (lower is better)
Translates to: RGAQVSQGERAS*QRVHLGQTWGW
Trigger: CCATCCCCATGTCTGCCCAAGATGCACCCGCTGCCAAGAAGCCCTTTCTCCTTGGCTGACTTGTGCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573591.1