RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GGT5 (Homo sapiens)

Ensembl gene IDs: ENSG00000099998

Ensembl transcript IDs: ENST00000263112.11, ENST00000327365.10, ENST00000398292.3, ENST00000425408.5, ENST00000623756.1

Found 384 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTaGGAGAGTGGCCCCAGGCAAGAGGCCTGCGGAGGGATAGAGGGG +
Preference number: 1 (lower is better)
Translates to: SASLILDWRIYRSRG*ESGPRQEACGGIEG
Trigger: CCCCTCTATCCCTCCGCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR GCA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCTCAGCTGGACTCCCCTaGCAGGGGTCCAGATCCTGC +
Preference number: 2 (lower is better)
Translates to: WRIYRSRGWESGPRQEACSAGLP*QGSRSC
Trigger: GCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGA...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCACACAGGACTCATGGTaGGGCCAGACTTCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: PARGPDPARVVGPPAMSGTQDSW*GQTSAL
Trigger: CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGT...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR CCA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCTCTCATCTGCCCAGCTaGTCCCCGCCACCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: WRIYRSRGWESGPRQEACSHLPS*SPPPLP
Trigger: TGGAAGAGGTGGCGGGGACCAGCTGGGCAGATGAGA...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR GCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCAGGGGTCCAGATCCTaGCAGAGTAGTTGGTCCCCC +
Preference number: 2 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRQGSRS*QSSWSP
Trigger: GGGGGACCAACTACTCTGGCAGGATCTGGACCCCTG...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR CCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGTCTCATCTGCCCAGCTaGTCCCCGCCACCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRSHLPS*SPPPLP
Trigger: TGGAAGAGGTGGCGGGGACCAGCTGGGCAGATGAGA...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGTCCTGCCAGAGTAGTTaGTCCCCCAGCCATGTCCGG +
Preference number: 2 (lower is better)
Translates to: LDWRIYRSRGWESGPRQESCQSS*SPSHVR
Trigger: CCGGACATGGCTGGGGGACCAACTACTCTGGCAGGA...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR GCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCTCAGCCTCTCATCTaGCCAGCTGGTCCCCGCCAC +
Preference number: 2 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQAQPLI*PAGPRH
Trigger: GTGGCGGGGACCAGCTGGGCAGATGAGAGGCTGAGC...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR GCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGGCTCAGCCTCTCATCTaGCCAGCTGGTCCCCGCCAC +
Preference number: 2 (lower is better)
Translates to: VRLFNLGLEDIQIERVGEAQPLI*PAGPRH
Trigger: GTGGCGGGGACCAGCTGGGCAGATGAGAGGCTGAGC...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR GCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTCCCAGGCAAGAGGCCTaGGGAGGGATAGAGGGGCCG +
Preference number: 2 (lower is better)
Translates to: SASLILDWRIYRSRGWESPRQEA*GGIEGP
Trigger: CGGCCCCTCTATCCCTCCGCAGGCCTCTTGCCTGGG...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR CCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGACACAGGACTCATGGTaGGGCCAGACTTCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRTQDSW*GQTSAL
Trigger: CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGT...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGTGGACACAGGACTCATaGTGGGGCCAGACTTCAGCT +
Preference number: 2 (lower is better)
Translates to: LDWRIYRSRGWESGPRQEWTQDS*WGQTSA
Trigger: AGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCA...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR CCA 90 bp CCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGCAGCCATGTCCGGCCTaGACACAGGACTCATGGTGG +
Preference number: 2 (lower is better)
Translates to: PQSASLILDWRIYRSRGWQPCPA*TQDSWW
Trigger: CCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG...CCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263112.11
3UTR-3UTR CCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGTCCTGCCAGAGTAGTTaGTCCCCCAGCCATGTCCGG +
Preference number: 2 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQSCQSS*SPSHVR
Trigger: CCGGACATGGCTGGGGGACCAACTACTCTGGCAGGA...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR CCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGACACAGGACTCATGGTaGGGCCAGACTTCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: VRLFNLGLEDIQIERVGETQDSW*GQTSAL
Trigger: CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGT...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR-3UTR CCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGACACAGGACTCATaGTGGGGCCAGACTTCAGCT +
Preference number: 2 (lower is better)
Translates to: VRLFNLGLEDIQIERVGEWTQDS*WGQTSA
Trigger: AGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCA...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR CCA 72 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATaGTGGGGCCAGACTTCAGCTCTGGGCAGAGCAGTG +
Preference number: 3 (lower is better)
Translates to: VPQPCPAWTQDS*WGQTSALGRAV
Trigger: CACTGCTCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
3UTR CCA 72 bp TTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTaGGAGAGTGGCCCCAGGCAAGAGGCCTGCGGAGGG +
Preference number: 3 (lower is better)
Translates to: LILDWRIYRSRG*ESGPRQEACGG
Trigger: CCCTCCGCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTGGCACCCCGATCCACTaGGCCCCTGTGCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPGTPIH*APVPSG
Trigger: GCCACTGGGCACAGGGGCCCAGTGGATCGGGGTGCC...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCCGATCTGTTGGCGGATaGGCTGGGCCAGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFRSVGG*AGPGSP
Trigger: GGGAGACCCTGGCCCAGCTCATCCGCCAACAGATCG...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGAGTGGGCTGGAACAGCTaGGCCCAGGGCAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRVGWNS*AQGRRP
Trigger: TGGCCGCCTGCCCTGGGCGCAGCTGTTCCAGCCCAC...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGTGGGCTGGAACAGCTaGGCCCAGGGCAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWVGWNS*AQGRRP
Trigger: TGGCCGCCTGCCCTGGGCGCAGCTGTTCCAGCCCAC...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCCAGAGCCGCGATGGTaGCATCCACGGGTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGPEPRW*HPRVSP
Trigger: AGGGCTCACCCGTGGATGCCACCATCGCGGCTCTGG...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGGAGCAGCGCGATGGTaGGCTGGAACAGCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSGAARW*AGTAAP
Trigger: GGGCGCAGCTGTTCCAGCCCACCATCGCGCTGCTCC...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCCACGGTCTCCAGGGTaGTGGCCAGTGCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGPRSPG*WPVQAM
Trigger: CATGGCCTGCACTGGCCACCACCCTGGAGACCGTGG...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCACCTCCACGCCCTCTGTaGCCACGGTCTCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPPPRPL*PRSPGW
Trigger: CCACCCTGGAGACCGTGGCCACAGAGGGCGTGGAGG...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCTGTTGGCGGATGAGCTaGGCCAGGGTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGCWRMS*ARVSPS
Trigger: GCTGGGGGAGACCCTGGCCCAGCTCATCCGCCAACA...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGGACGTGCCTGTCCCGTaGCCCCAGGCCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEDVPVP*PQASAK
Trigger: CTTGGCCGAGGCCTGGGGCCACGGGACAGGCACGTC...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAACGCTCGCCTGGAACTaGGGGCCAGCACCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSTLAWN*GPAPSG
Trigger: CCCGGAAGGTGCTGGCCCCCAGTTCCAGGCGAGCGT...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGAGCCTGTGCACACTaGTCCAGCAGGCTCGGGGCG +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFRACAH*SSRLGA
Trigger: CGCCCCGAGCCTGCTGGACCAGTGTGCACAGGCTCT...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGGCACCCCGATCCACTaGGCCCCTGTGCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWGTPIH*APVPSG
Trigger: GCCACTGGGCACAGGGGCCCAGTGGATCGGGGTGCC...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTGGTGGCATCCACGGGTaGGCCCTGCTGCTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPGGIHG*ALLLED
Trigger: ATCCTCCAGCAGCAGGGCTCACCCGTGGATGCCACC...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGAGCTGGCGCAGGGTTaGCGCCTGCAAGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWELAQG*RLQGRP
Trigger: CGGCCTTCCTTGCAGGCGTCAACCCTGCGCCAGCTC...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCGGGGTTCTGTCCCGTTaGAGAAGAGCTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFGVLSR*RRAGAG
Trigger: CCCTGCGCCAGCTCTTCTTCAACGGGACAGAACCCC...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCACGGGTGAGCCCTGCTaGTGGAGGATGGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFTGEPC*WRMARP
Trigger: TGGACGAGCCATCCTCCAGCAGCAGGGCTCACCCGT...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCGCAGGGTTGACGCCTaGAAGGAAGGCCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGRRVDA*KEGRRM
Trigger: CATCCTGCGGCCTTCCTTGCAGGCGTCAACCCTGCG...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCTCAGCTGGACTCCCCTaGCAGGGGTCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGSAGLP*QGSRSC
Trigger: GCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGA...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTGCTCAGCCTCTCATCTaGCCAGCTGGTCCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPAQPLI*PAGPRH
Trigger: GTGGCGGGGACCAGCTGGGCAGATGAGAGGCTGAGC...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGACCAGAGCCGCGATaGTGGCATCCACGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFRPEPR*WHPRVS
Trigger: GCTCACCCGTGGATGCCACCATCGCGGCTCTGGTCT...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGAGCGCGATGGTGGGCTaGAACAGCTGCGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALSAMVG*NSCAQG
Trigger: GCCCTGGGCGCAGCTGTTCCAGCCCACCATCGCGCT...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGAGGAGCAGCGCGATGGTaGGCTGGAACAGCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRGAARW*AGTAAP
Trigger: GGGCGCAGCTGTTCCAGCCCACCATCGCGCTGCTCC...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCTTCTGGAGCTTCGGGTaGCTTCGAGGGTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFFWSFG*LRGSPS
Trigger: GCTGGGGGACCCTCGAAGCCACCCGAAGCTCCAGAA...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCTTCTGGAGCTTCGGGTaGCTTCGAGGGTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGFWSFG*LRGSPS
Trigger: GCTGGGGGACCCTCGAAGCCACCCGAAGCTCCAGAA...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCATGTTGGCGGATGAGCTaGGCCAGGGTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSCWRMS*ARVSPS
Trigger: GCTGGGGGAGACCCTGGCCCAGCTCATCCGCCAACA...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCGACGTGCCTGTCCCGTaGCCCCAGGCCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: WRIYRSRGWESGPRQEACDVPVP*PQASAK
Trigger: CTTGGCCGAGGCCTGGGGCCACGGGACAGGCACGTC...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGACGCTCGCCTGGAACTaGGGGCCAGCACCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWTLAWN*GPAPSG
Trigger: CCCGGAAGGTGCTGGCCCCCAGTTCCAGGCGAGCGT...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCGGGCACCATGGAGGATaGGGAACGCTCGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGGHHGG*GTLAWN
Trigger: GTTCCAGGCGAGCGTTCCCCATCCTCCATGGTGCCC...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTAGAGCCTGTGCACACTaGTCCAGCAGGCTCGGGGCG +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPRACAH*SSRLGA
Trigger: CGCCCCGAGCCTGCTGGACCAGTGTGCACAGGCTCT...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGCCCAGGCCCATGCTCTaGGGGTTGACGACGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEPRPML*GLTTLV
Trigger: CACCAGCGTCGTCAACCCTCAGAGCATGGGCCTGGG...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTCATGGGAGTGGGTCCTaGGGCCTCAGGGGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPHGSGS*GLRGSV
Trigger: GACAGAACCCCTGAGGCCTCAGGACCCACTCCCATG...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCACATGGGAGTGGGTCCTaGGGCCTCAGGGGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPHGSGS*GLRGSV
Trigger: GACAGAACCCCTGAGGCCTCAGGACCCACTCCCATG...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCATGCAGGCGGCGGTGGTaGGTACAGGGTATAGTCCCC +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSCRRRW*VQGIVP
Trigger: GGGGACTATACCCTGTACTCACCACCGCCGCCTGCA...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGCGATCTGTTGGCGGATaGGCTGGGCCAGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALRSVGG*AGPGSP
Trigger: GGGAGACCCTGGCCCAGCTCATCCGCCAACAGATCG...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCATCCACGGGTGAGCCCTaGTGCTGGAGGATGGCTCGT +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSSTGEP*CWRMAR
Trigger: ACGAGCCATCCTCCAGCAGCAGGGCTCACCCGTGGA...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGACAGGGGCCACCACATaGCCCCCTCGGAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRTGATT*PPRSSA
Trigger: CGCGCTGCTCCGAGGGGGGCATGTGGTGGCCCCTGT...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAACTTGGCCAGGTCCTaGAGCGTCAGCTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFNLARS*SVSWLP
Trigger: AGGGAGCCAGCTGACGCTGCAGGACCTGGCCAAGTT...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCCCCAGCCTCCACCTCTaGCCCTTGGCAAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFPSLHL*PLANLS
Trigger: GCTCAAGTTTGCCAAGGGGCAGAGGTGGAGGCTGGG...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCATGCAGGATGGGGGCTaGAATGGCCGCTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFMQDGG*NGRSQV
Trigger: GACCTGAGAGCGGCCATTGCAGCCCCCATCCTGCAT...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCCAGGGGTCCAGATCCTaGCAGAGTAGTTGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFQGSRS*QSSWSP
Trigger: GGGGGACCAACTACTCTGGCAGGATCTGGACCCCTG...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGCCAGAGCCGCGATGGTaGCATCCACGGGTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALPEPRW*HPRVSP
Trigger: AGGGCTCACCCGTGGATGCCACCATCGCGGCTCTGG...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGCCAGAGCCGCGATGGTaGCATCCACGGGTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEPEPRW*HPRVSP
Trigger: AGGGCTCACCCGTGGATGCCACCATCGCGGCTCTGG...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGACTCGGAGCAGCGCGATaGTGGGCTGGAACAGCTGCG +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRLGAAR*WAGTAA
Trigger: CGCAGCTGTTCCAGCCCACCATCGCGCTGCTCCGAG...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGACCACGGTCTCCAGGGTaGTGGCCAGTGCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRPRSPG*WPVQAM
Trigger: CATGGCCTGCACTGGCCACCACCCTGGAGACCGTGG...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCCCTCCACGCCCTCTGTaGCCACGGTCTCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: WRIYRSRGWESGPRQEACPPRPL*PRSPGW
Trigger: CCACCCTGGAGACCGTGGCCACAGAGGGCGTGGAGG...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTCCTCGGGCTGGAACTTaGCCAGGTCCTGCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPPRAGT*PGPAAS
Trigger: TGACGCTGCAGGACCTGGCCAAGTTCCAGCCCGAGG...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCACCTCGGGCTGGAACTTaGCCAGGTCCTGCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPPRAGT*PGPAAS
Trigger: TGACGCTGCAGGACCTGGCCAAGTTCCAGCCCGAGG...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCACGGCCATCGATCTGTTaGCGGATGAGCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPRPSIC*RMSWAR
Trigger: CCTGGCCCAGCTCATCCGCCAACAGATCGATGGCCG...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGGACGTGCCTGTCCCGTaGCCCCAGGCCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRDVPVP*PQASAK
Trigger: CTTGGCCGAGGCCTGGGGCCACGGGACAGGCACGTC...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCACCCAGCACAGACACATaGGACGTGCCTGTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPPSTDT*DVPVPW
Trigger: CCACGGGACAGGCACGTCCCATGTGTCTGTGCTGGG...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGATGGGGAACGCTCGCCTaGAACTGGGGGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRWGTLA*NWGPAP
Trigger: AGGTGCTGGCCCCCAGTTCCAGGCGAGCGTTCCCCA...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGTGGGGAACGCTCGCCTaGAACTGGGGGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEWGTLA*NWGPAP
Trigger: AGGTGCTGGCCCCCAGTTCCAGGCGAGCGTTCCCCA...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCAGATGGAGGGCACCATaGAGGATGGGGAACGCTCGC +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGRWRAP*RMGNAR
Trigger: GCGAGCGTTCCCCATCCTCCATGGTGCCCTCCATCT...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCGGATGGGGGCTGCAATaGCCGCTCTCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFGWGLQ*PLSGQS
Trigger: GCTTTGACCTGAGAGCGGCCATTGCAGCCCCCATCC...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCTTCTGGCCACGGTCTTaGAGTCCCCTCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFFWPRS*SPLCTS
Trigger: GGAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAA...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCCTCTGGGTCTGGTTCTaGCCACGGTCTTGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFLWVWF*PRSWSP
Trigger: GGGACTCCAAGACCGTGGCCAGAACCAGACCCAGAG...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCAAGGGCCTCTGGGTCTaGTTCTGGCCACGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGKGLWV*FWPRSW
Trigger: CCAAGACCGTGGCCAGAACCAGACCCAGAGGCCCTT...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCAGCCATGTCCGGCCTaGACACAGGACTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGQPCPA*TQDSWW
Trigger: CCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCTCTCATCTGCCCAGCTaGTCCCCGCCACCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFSHLPS*SPPPLP
Trigger: TGGAAGAGGTGGCGGGGACCAGCTGGGCAGATGAGA...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGAGCAGGCTCGGGGCGTaGCTGGCCGGCACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQESRLGA*LAGTVS
Trigger: GGAGACGGTGCCGGCCAGCCACGCCCCGAGCCTGCT...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCACAGACAGACAGGTCTaGACAGCGGGCTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGTDRQV*TAGCQM
Trigger: CATCTGGCAGCCCGCTGTTCAGACCTGTCTGTCTGT...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCACCATGCTCTGAGGGTTaGCGACGCTGGTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSPCSEG*RRWCRP
Trigger: TGGTCTGCACCAGCGTCGTCAACCCTCAGAGCATGG...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTTGTGCAGGAAACGGCTaGGGACAGGGGCCACCACAT +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPCAGNG*GQGPPH
Trigger: ATGTGGTGGCCCCTGTCCTCAGCCGTTTCCTGCACA...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGCATGGGAGTGGGTCCTaGGGCCTCAGGGGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALHGSGS*GLRGSV
Trigger: GACAGAACCCCTGAGGCCTCAGGACCCACTCCCATG...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGTGCAGGCGGCGGTGGTaGGTACAGGGTATAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWCRRRW*VQGIVP
Trigger: GGGGACTATACCCTGTACTCACCACCGCCGCCTGCA...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGATGCAGGCGGCGGTGGTaGGTACAGGGTATAGTCCCC +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRCRRRW*VQGIVP
Trigger: GGGGACTATACCCTGTACTCACCACCGCCGCCTGCA...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTCCAAAGGGTGTGTTaGTGGTGCTGGTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGLQRVC*WCWWQP
Trigger: TGGCTGCCACCAGCACCATCAACACACCCTTTGGAG...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGAGCCACAGCTTGCTCATaGTGGCCTGGGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRATACS*WPGPQQ
Trigger: CTGCTGTGGCCCAGGCCATCATGAGCAAGCTGTGGC...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGATCCACGGGTGAGCCCTaGTGCTGGAGGATGGCTCGT +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRSTGEP*CWRMAR
Trigger: ACGAGCCATCCTCCAGCAGCAGGGCTCACCCGTGGA...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGCGCAGGGTTGACGCCTaGAAGGAAGGCCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALRRVDA*KEGRRM
Trigger: CATCCTGCGGCCTTCCTTGCAGGCGTCAACCCTGCG...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCACAGGGGTCCAGATCCTaGCAGAGTAGTTGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSQGSRS*QSSWSP
Trigger: GGGGGACCAACTACTCTGGCAGGATCTGGACCCCTG...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCGCTCAGCCTCTCATCTaGCCAGCTGGTCCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: WRIYRSRGWESGPRQEACAQPLI*PAGPRH
Trigger: GTGGCGGGGACCAGCTGGGCAGATGAGAGGCTGAGC...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCCAGGCAAGAGGCCTaGGGAGGGATAGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRPRQEA*GGIEGP
Trigger: CGGCCCCTCTATCCCTCCGCAGGCCTCTTGCCTGGG...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCGCTGGCTCCCTTCCTTaGCAATGTCCTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFAGSLP*QCPPPA
Trigger: TGCTGGTGGAGGACATTGCCAAGGAAGGGAGCCAGC...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCTCCTGCAGCGTCAGCTaGCTCCCTTCCTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGSCSVS*LPSLAM
Trigger: CATTGCCAAGGAAGGGAGCCAGCTGACGCTGCAGGA...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGTTCTGGAGCTTCGGGTaGCTTCGAGGGTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWFWSFG*LRGSPS
Trigger: GCTGGGGGACCCTCGAAGCCACCCGAAGCTCCAGAA...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGCCCAGCACAGACACATaGGACGTGCCTGTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEPSTDT*DVPVPW
Trigger: CCACGGGACAGGCACGTCCCATGTGTCTGTGCTGGG...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGCCCAGCACAGACACATaGGACGTGCCTGTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALPSTDT*DVPVPW
Trigger: CCACGGGACAGGCACGTCCCATGTGTCTGTGCTGGG...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCTGGGGAACGCTCGCCTaGAACTGGGGGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: WRIYRSRGWESGPRQEACWGTLA*NWGPAP
Trigger: AGGTGCTGGCCCCCAGTTCCAGGCGAGCGTTCCCCA...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGGCACCATGGAGGATaGGGAACGCTCGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALGHHGG*GTLAWN
Trigger: GTTCCAGGCGAGCGTTCCCCATCCTCCATGGTGCCC...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGAGGGCACCATGGAGGATaGGGAACGCTCGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRGHHGG*GTLAWN
Trigger: GTTCCAGGCGAGCGTTCCCCATCCTCCATGGTGCCC...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTGGATGGGGGCTGCAATaGCCGCTCTCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPGWGLQ*PLSGQS
Trigger: GCTTTGACCTGAGAGCGGCCATTGCAGCCCCCATCC...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTTTCTGGCCACGGTCTTaGAGTCCCCTCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPFWPRS*SPLCTS
Trigger: GGAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAA...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCATTCTGGCCACGGTCTTaGAGTCCCCTCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPFWPRS*SPLCTS
Trigger: GGAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAA...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAAGGAAGAAGGGCCTCTaGGTCTGGTTCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPRKKGL*VWFWPR
Trigger: CCGTGGCCAGAACCAGACCCAGAGGCCCTTCTTCCT...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAACAGACAGACAGGTCTaGACAGCGGGCTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPTDRQV*TAGCQM
Trigger: CATCTGGCAGCCCGCTGTTCAGACCTGTCTGTCTGT...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGACCATGCTCTGAGGGTTaGCGACGCTGGTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRPCSEG*RRWCRP
Trigger: TGGTCTGCACCAGCGTCGTCAACCCTCAGAGCATGG...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGTGTGCAGGAAACGGCTaGGGACAGGGGCCACCACAT +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALCAGNG*GQGPPH
Trigger: ATGTGGTGGCCCCTGTCCTCAGCCGTTTCCTGCACA...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCACTCCAAAGGGTGTGTTaGTGGTGCTGGTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSLQRVC*WCWWQP
Trigger: TGGCTGCCACCAGCACCATCAACACACCCTTTGGAG...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTCTCCAAAGGGTGTGTTaGTGGTGCTGGTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPLQRVC*WCWWQP
Trigger: TGGCTGCCACCAGCACCATCAACACACCCTTTGGAG...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCGCCACAGCTTGCTCATaGTGGCCTGGGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: WRIYRSRGWESGPRQEACATACS*WPGPQQ
Trigger: CTGCTGTGGCCCAGGCCATCATGAGCAAGCTGTGGC...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCATCTGCACCTCCTGGCTaGAGTTGGGCTCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPSAPPG*SWARTP
Trigger: TGGAGTACGAGCCCAACTTCAGCCAGGAGGTGCAGA...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCATCTGCACCTCCTGGCTaGAGTTGGGCTCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSSAPPG*SWARTP
Trigger: TGGAGTACGAGCCCAACTTCAGCCAGGAGGTGCAGA...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGAACTTGGCCAGGTCCTaGAGCGTCAGCTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALNLARS*SVSWLP
Trigger: AGGGAGCCAGCTGACGCTGCAGGACCTGGCCAAGTT...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGCCCAGCCTCCACCTCTaGCCCTTGGCAAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALPSLHL*PLANLS
Trigger: GCTCAAGTTTGCCAAGGGGCAGAGGTGGAGGCTGGG...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGCCCAGCCTCCACCTCTaGCCCTTGGCAAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEPSLHL*PLANLS
Trigger: GCTCAAGTTTGCCAAGGGGCAGAGGTGGAGGCTGGG...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGATGCAGGATGGGGGCTaGAATGGCCGCTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWMQDGG*NGRSQV
Trigger: GACCTGAGAGCGGCCATTGCAGCCCCCATCCTGCAT...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGATGCAGGATGGGGGCTaGAATGGCCGCTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEMQDGG*NGRSQV
Trigger: GACCTGAGAGCGGCCATTGCAGCCCCCATCCTGCAT...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCCCTTGCTGTTGACATaGAGGATGGGGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGPLLLT*RMGAAM
Trigger: CATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGG...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCCCCTTGCTGTTGACATaGAGGATGGGGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFPLLLT*RMGAAM
Trigger: CATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGG...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGCAGGGGTCCAGATCCTaGCAGAGTAGTTGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEQGSRS*QSSWSP
Trigger: GGGGGACCAACTACTCTGGCAGGATCTGGACCCCTG...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGTCCACTGGGCCCCTGTaGCCAGTGGCAGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRSTGPL*PVAEPV
Trigger: CACAGGCTCTGCCACTGGGCACAGGGGCCCAGTGGA...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGGTGAGCCCTGCTGCTaGAGGATGGCTCGTCCAATA +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPGEPCC*RMARPI
Trigger: TATTGGACGAGCCATCCTCCAGCAGCAGGGCTCACC...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGAGCGCGATGGTGGGCTaGAACAGCTGCGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQESAMVG*NSCAQG
Trigger: GCCCTGGGCGCAGCTGTTCCAGCCCACCATCGCGCT...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCTCGGAGCAGCGCGATaGTGGGCTGGAACAGCTGCG +
Preference number: 4 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRLGAAR*WAGTAA
Trigger: CGCAGCTGTTCCAGCCCACCATCGCGCTGCTCCGAG...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCCGGCCATCGATCTGTTaGCGGATGAGCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WRIYRSRGWESGPRQEACRPSIC*RMSWAR
Trigger: CCTGGCCCAGCTCATCCGCCAACAGATCGATGGCCG...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGACGCTCGCCTGGAACTaGGGGCCAGCACCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQETLAWN*GPAPSG
Trigger: CCCGGAAGGTGCTGGCCCCCAGTTCCAGGCGAGCGT...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGAGATGGAGGGCACCATaGAGGATGGGGAACGCTCGC +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPERWRAP*RMGNAR
Trigger: GCGAGCGTTCCCCATCCTCCATGGTGCCCTCCATCT...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGAGATGGAGGGCACCATaGAGGATGGGGAACGCTCGC +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALRWRAP*RMGNAR
Trigger: GCGAGCGTTCCCCATCCTCCATGGTGCCCTCCATCT...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGGATGGGGGCTGCAATaGCCGCTCTCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWGWGLQ*PLSGQS
Trigger: GCTTTGACCTGAGAGCGGCCATTGCAGCCCCCATCC...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGCCCCTCTGCACCTCCTaGCTGAAGTTGGGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWPLCTS*LKLGSY
Trigger: GTACGAGCCCAACTTCAGCCAGGAGGTGCAGAGGGG...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGTTCTGGCCACGGTCTTaGAGTCCCCTCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEFWPRS*SPLCTS
Trigger: GGAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAA...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGACTCTGGGTCTGGTTCTaGCCACGGTCTTGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRLWVWF*PRSWSP
Trigger: GGGACTCCAAGACCGTGGCCAGAACCAGACCCAGAG...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGCTCTGGGTCTGGTTCTaGCCACGGTCTTGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALLWVWF*PRSWSP
Trigger: GGGACTCCAAGACCGTGGCCAGAACCAGACCCAGAG...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGCTCTGGGTCTGGTTCTaGCCACGGTCTTGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWLWVWF*PRSWSP
Trigger: GGGACTCCAAGACCGTGGCCAGAACCAGACCCAGAG...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGAAGGGCCTCTGGGTCTaGTTCTGGCCACGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEKGLWV*FWPRSW
Trigger: CCAAGACCGTGGCCAGAACCAGACCCAGAGGCCCTT...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGAGGAAGAAGGGCCTCTaGGTCTGGTTCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPERKKGL*VWFWPR
Trigger: CCGTGGCCAGAACCAGACCCAGAGGCCCTTCTTCCT...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCTCCTGGGACACAGCCTaGACCACGTTCAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFSWDTA*TTFRKK
Trigger: CTTCTTCCTGAACGTGGTCCAGGCTGTGTCCCAGGA...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCTCCTGGGACACAGCCTaGACCACGTTCAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGSWDTA*TTFRKK
Trigger: CTTCTTCCTGAACGTGGTCCAGGCTGTGTCCCAGGA...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCACACAGGACTCATGGTaGGGCCAGACTTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFTQDSW*GQTSAL
Trigger: CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGT...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCTGGACACAGGACTCATaGTGGGGCCAGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGWTQDS*WGQTSA
Trigger: AGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCA...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGTCCTGCCAGAGTAGTTaGTCCCCCAGCCATGTCCGG +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPESCQSS*SPSHVR
Trigger: CCGGACATGGCTGGGGGACCAACTACTCTGGCAGGA...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGTCCTGCCAGAGTAGTTaGTCCCCCAGCCATGTCCGG +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWSCQSS*SPSHVR
Trigger: CCGGACATGGCTGGGGGACCAACTACTCTGGCAGGA...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGTCTCATCTGCCCAGCTaGTCCCCGCCACCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALSHLPS*SPPPLP
Trigger: TGGAAGAGGTGGCGGGGACCAGCTGGGCAGATGAGA...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTGCCCCTTGGCAAACTTaGGCGTCTCTACAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPAPWQT*ASLQGG
Trigger: ACCACCTTGTAGAGACGCTCAAGTTTGCCAAGGGGC...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGAGGAAGGCCGCAGGATaGTGTTGTGCAGGAAACGGC +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPERKAAG*CCAGNG
Trigger: GCCGTTTCCTGCACAACAGCATCCTGCGGCCTTCCT...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCATCTTGGAGTCCCCTCTaGACCTCCTGGCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPSWSPL*TSWLKL
Trigger: CAACTTCAGCCAGGAGGTGCAGAGGGGACTCCAAGA...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAAGTGTCTTAGTAGCCTaGGGCCTCCCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPSVLVA*GLPTLP
Trigger: AGGAAGAGTGGGGAGGCCGCAGGCTACTAAGACACT...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTAGTGTCTTAGTAGCCTaGGGCCTCCCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPSVLVA*GLPTLP
Trigger: AGGAAGAGTGGGGAGGCCGCAGGCTACTAAGACACT...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCATCTTGGAGTCCCCTCTaGACCTCCTGTAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSSWSPL*TSCNAS
Trigger: GCTGGCATTACAGGAGGTGCAGAGGGGACTCCAAGA...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425408.5
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGTGAGCCCTGCTGCTaGAGGATGGCTCGTCCAATA +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALGEPCC*RMARPI
Trigger: TATTGGACGAGCCATCCTCCAGCAGCAGGGCTCACC...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGAGCTGGCTCCCTTCCTTaGCAATGTCCTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRAGSLP*QCPPPA
Trigger: TGCTGGTGGAGGACATTGCCAAGGAAGGGAGCCAGC...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGTCCTGCAGCGTCAGCTaGCTCCCTTCCTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALSCSVS*LPSLAM
Trigger: CATTGCCAAGGAAGGGAGCCAGCTGACGCTGCAGGA...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCGTCTCTACAAGGTaGTGGTACACGTTCACCCTC +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFSVSTR*WYTFTL
Trigger: GAGGGTGAACGTGTACCACCACCTTGTAGAGACGCT...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGTGTTGGCGGATGAGCTaGGCCAGGGTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQECWRMS*ARVSPS
Trigger: GCTGGGGGAGACCCTGGCCCAGCTCATCCGCCAACA...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGTGGGGAACGCTCGCCTaGAACTGGGGGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQEWGTLA*NWGPAP
Trigger: AGGTGCTGGCCCCCAGTTCCAGGCGAGCGTTCCCCA...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCAGGAAGAAGGGCCTCTaGGTCTGGTTCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: WRIYRSRGWESGPRQEACRKKGL*VWFWPR
Trigger: CCGTGGCCAGAACCAGACCCAGAGGCCCTTCTTCCT...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTTCCTGGGACACAGCCTaGACCACGTTCAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPSWDTA*TTFRKK
Trigger: CTTCTTCCTGAACGTGGTCCAGGCTGTGTCCCAGGA...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAACACAGGACTCATGGTaGGGCCAGACTTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPTQDSW*GQTSAL
Trigger: CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGT...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGATACAGATCGAGAGGGTaGGAGAGTGGCCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRYRSRG*ESGPRQ
Trigger: TTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTA...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGCCAGCAGGACTAGGCTaGCCGTGGCCCCGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQPAGLG*PWPRSP
Trigger: GGGGCTACGGGGCCACGGTCAGCCTAGTCCTGCTGG...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGATCCTGTTTCTGGCTaGAGTTGGGCTCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSDPVSG*SWARTP
Trigger: TGGAGTACGAGCCCAACTTCAGCCAGAAACAGGATC...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425408.5
CDS-3UTR TCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGGGAAGGAGGATCACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEGRRIT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTGATCCTCCTTCC...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425408.5
CDS-3UTR GCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGACGGGTGAGCCCTGCTaGTGGAGGATGGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQETGEPC*WRMARP
Trigger: TGGACGAGCCATCCTCCAGCAGCAGGGCTCACCCGT...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGACAGGGGCCACCACATaGCCCCCTCGGAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGETGATT*PPRSSA
Trigger: CGCGCTGCTCCGAGGGGGGCATGTGGTGGCCCCTGT...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGTCTTGGAGTCCCCTCTaGACCTCCTGGCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWSWSPL*TSWLKL
Trigger: CAACTTCAGCCAGGAGGTGCAGAGGGGACTCCAAGA...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGTCTTGGAGTCCCCTCTaGACCTCCTGGCTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPESWSPL*TSWLKL
Trigger: CAACTTCAGCCAGGAGGTGCAGAGGGGACTCCAAGA...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGAGTGTCTTAGTAGCCTaGGGCCTCCCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWSVLVA*GLPTLP
Trigger: AGGAAGAGTGGGGAGGCCGCAGGCTACTAAGACACT...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAAGATGGGCTTACAGATaGGCGGACAGACAGACAGGT +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPRWAYR*ADRQTG
Trigger: ACCTGTCTGTCTGTCCGCCCATCTGTAAGCCCATCT...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAACAATGGGACAGAGATaGGCTTACAGATGGGCGGAC +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPTMGQR*AYRWAD
Trigger: GTCCGCCCATCTGTAAGCCCATCTCTGTCCCATTGT...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGAGACCAGAGCCGCGATaGTGGCATCCACGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQERPEPR*WHPRVS
Trigger: GCTCACCCGTGGATGCCACCATCGCGGCTCTGGTCT...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGGGCACCCCGATCCACTaGGCCCCTGTTGTCACATTG +
Preference number: 4 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRGTPIH*APVVTL
Trigger: CAATGTGACAACAGGGGCCCAGTGGATCGGGGTGCC...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS-3UTR CCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGTCTCTACAAGGTGGTaGTACACGTTCACCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSVSTRW*YTFTLP
Trigger: AGGGAGGGTGAACGTGTACCACCACCTTGTAGAGAC...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCATTGCTCATGATGGCCTaGGCCACAGCAGAGATGATG +
Preference number: 4 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPLLMMA*ATAEMM
Trigger: CATCATCTCTGCTGTGGCCCAGGCCATCATGAGCAA...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGTGGACACAGGACTCATaGTGGGGCCAGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALWTQDS*WGQTSA
Trigger: AGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCA...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGTCCTGCCAGAGTAGTTaGTCCCCCAGCCATGTCCGG +
Preference number: 4 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRSCQSS*SPSHVR
Trigger: CCGGACATGGCTGGGGGACCAACTACTCTGGCAGGA...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCGCAAGATCCTGTTTCTaGCTGAAGTTGGGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: PARGPDPARVVGPPAMSGARSCF*LKLGSY
Trigger: GTACGAGCCCAACTTCAGCCAGAAACAGGATCTTGC...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425408.5
CDS-3UTR TCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTCCAGCAGGACTAGGCTaGCCGTGGCCCCGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: SASLILDWRIYRSRGWESPAGLG*PWPRSP
Trigger: GGGGCTACGGGGCCACGGTCAGCCTAGTCCTGCTGG...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp CCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGCTGGCGCAGGGTTaGCGCCTGCAAGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: PQSASLILDWRIYRSRGWELAQG*RLQGRP
Trigger: CGGCCTTCCTTGCAGGCGTCAACCCTGCGCCAGCTC...CCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS-3UTR TCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGGAGCTGGCGCAGGGTTaGCGCCTGCAAGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGEELAQG*RLQGRP
Trigger: CGGCCTTCCTTGCAGGCGTCAACCCTGCGCCAGCTC...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCGCCCCTTGGCAAACTTaGGCGTCTCTACAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: WRIYRSRGWESGPRQEACAPWQT*ASLQGG
Trigger: ACCACCTTGTAGAGACGCTCAAGTTTGCCAAGGGGC...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGGATGCCTGTCCGTGGTaGATACACCATCGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEDACPW*IHHRSK
Trigger: TTTGGAGCGATGGTGTATTCACCACGGACAGGCATC...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGATGCCTGTCCGTGGTaGATACACCATCGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWDACPW*IHHRSK
Trigger: TTTGGAGCGATGGTGTATTCACCACGGACAGGCATC...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTACAGGGGCCACCACATaGCCCCCTCGGAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: SASLILDWRIYRSRGWESTGATT*PPRSSA
Trigger: CGCGCTGCTCCGAGGGGGGCATGTGGTGGCCCCTGT...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCCCCTTGCTGTTGACATaGAGGATGGGGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: WRIYRSRGWESGPRQEACPLLLT*RMGAAM
Trigger: CATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGG...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGCCCAGGCAAGAGGCCTaGGGAGGGATAGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGEPRQEA*GGIEGP
Trigger: CGGCCCCTCTATCCCTCCGCAGGCCTCTTGCCTGGG...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGCCCAGGCAAGAGGCCTaGGGAGGGATAGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQPRQEA*GGIEGP
Trigger: CGGCCCCTCTATCCCTCCGCAGGCCTCTTGCCTGGG...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGAGATGGGCTTACAGATaGGCGGACAGACAGACAGGT +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALRWAYR*ADRQTG
Trigger: ACCTGTCTGTCTGTCCGCCCATCTGTAAGCCCATCT...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp CCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGAGCGCGATGGTGGGCTaGAACAGCTGCGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PQSASLILDWRIYRSRGWSAMVG*NSCAQG
Trigger: GCCCTGGGCGCAGCTGTTCCAGCCCACCATCGCGCT...CCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS-3UTR CCA 90 bp CCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGGAGCAGCGCGATGGTaGGCTGGAACAGCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: PQSASLILDWRIYRSRGWGAARW*AGTAAP
Trigger: GGGCGCAGCTGTTCCAGCCCACCATCGCGCTGCTCC...CCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS-3UTR CCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGGTCTCTACAAGGTGGTaGTACACGTTCACCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEVSTRW*YTFTLP
Trigger: AGGGAGGGTGAACGTGTACCACCACCTTGTAGAGAC...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGTCCCGGGAGGCATTCTaGAGCTTCGGGTGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQESREAF*SFGWLR
Trigger: TCGAAGCCACCCGAAGCTCCAGAATGCCTCCCGGGA...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGAGATGGAGGGCACCATaGAGGATGGGGAACGCTCGC +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQERWRAP*RMGNAR
Trigger: GCGAGCGTTCCCCATCCTCCATGGTGCCCTCCATCT...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCACTAGCTTCGACCCCTaGGCTTTGTTGATCAAGATG +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFTSFDP*ALLIKM
Trigger: CATCTTGATCAACAAAGCCCAGGGGTCGAAGCTAGT...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGTTGCTCATGATGGCCTaGGCCACAGCAGAGATGATG +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALLLMMA*ATAEMM
Trigger: CATCATCTCTGCTGTGGCCCAGGCCATCATGAGCAA...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGTTGCTCATGATGGCCTaGGCCACAGCAGAGATGATG +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWLLMMA*ATAEMM
Trigger: CATCATCTCTGCTGTGGCCCAGGCCATCATGAGCAA...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGGATGGGGGCTGCAATaGCCGCTCTCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQEGWGLQ*PLSGQS
Trigger: GCTTTGACCTGAGAGCGGCCATTGCAGCCCCCATCC...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGCCCCTCTGCACCTCCTaGCTGAAGTTGGGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQEPLCTS*LKLGSY
Trigger: GTACGAGCCCAACTTCAGCCAGGAGGTGCAGAGGGG...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGCAGCCATGTCCGGCCTaGACACAGGACTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQEQPCPA*TQDSWW
Trigger: CCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGTACAGATCGAGAGGGTaGGAGAGTGGCCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRYRSRG*ESGPRQ
Trigger: TTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTA...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGACAGACAGACAGGTCTaGACAGCGGGCTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQETDRQV*TAGCQM
Trigger: CATCTGGCAGCCCGCTGTTCAGACCTGTCTGTCTGT...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGCCCAGGCCCATGCTCTaGGGGTTGACGACGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGEPRPML*GLTTLV
Trigger: CACCAGCGTCGTCAACCCTCAGAGCATGGGCCTGGG...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGCAGGGTGGTGGCCAGTaGAGGCCATGGGAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGEQGGGQ*RPWEWV
Trigger: GACCCACTCCCATGGCCTGCACTGGCCACCACCCTG...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp AGGCCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGCCACGGTCTCCAGGGTaGTGGCCAGTGCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: RPQSASLILDWRIYRSRGPRSPG*WPVQAM
Trigger: CATGGCCTGCACTGGCCACCACCCTGGAGACCGTGG...CCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCTGGCTCCCTTCCTTaGCAATGTCCTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQEAGSLP*QCPPPA
Trigger: TGCTGGTGGAGGACATTGCCAAGGAAGGGAGCCAGC...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAACTAGCTTCGACCCCTaGGCTTTGTTGATCAAGATG +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSTSFDP*ALLIKM
Trigger: CATCTTGATCAACAAAGCCCAGGGGTCGAAGCTAGT...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCTTGCTCATGATGGCCTaGGCCACAGCAGAGATGATG +
Preference number: 4 (lower is better)
Translates to: WRIYRSRGWESGPRQEACLLMMA*ATAEMM
Trigger: CATCATCTCTGCTGTGGCCCAGGCCATCATGAGCAA...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGTGGACACAGGACTCATaGTGGGGCCAGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRWTQDS*WGQTSA
Trigger: AGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCA...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGTACAGATCGAGAGGGTaGGAGAGTGGCCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQEYRSRG*ESGPRQ
Trigger: TTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTA...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGGGGTTCTGTCCCGTTaGAGAAGAGCTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQGVLSR*RRAGAG
Trigger: CCCTGCGCCAGCTCTTCTTCAACGGGACAGAACCCC...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGGGGGTTCTGTCCCGTTaGAGAAGAGCTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGEGVLSR*RRAGAG
Trigger: CCCTGCGCCAGCTCTTCTTCAACGGGACAGAACCCC...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGGATGCCTGTCCGTGGTaGATACACCATCGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRDACPW*IHHRSK
Trigger: TTTGGAGCGATGGTGTATTCACCACGGACAGGCATC...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp AGGCCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGGCCACAGCTTGCTCATaGTGGCCTGGGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: RPQSASLILDWRIYRSRGATACS*WPGPQQ
Trigger: CTGCTGTGGCCCAGGCCATCATGAGCAAGCTGTGGC...CCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS-3UTR TCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCCACAGCTTGCTCATaGTGGCCTGGGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQATACS*WPGPQQ
Trigger: CTGCTGTGGCCCAGGCCATCATGAGCAAGCTGTGGC...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGACGGGTGAGCCCTGCTaGTGGAGGATGGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGETGEPC*WRMARP
Trigger: TGGACGAGCCATCCTCCAGCAGCAGGGCTCACCCGT...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGCGCAGGGTTGACGCCTaGAAGGAAGGCCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGERRVDA*KEGRRM
Trigger: CATCCTGCGGCCTTCCTTGCAGGCGTCAACCCTGCG...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTCAGGGTGGTGGCCAGTaGAGGCCATGGGAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SASLILDWRIYRSRGWESQGGGQ*RPWEWV
Trigger: GACCCACTCCCATGGCCTGCACTGGCCACCACCCTG...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGTCAGCTGGACTCCCCTaGCAGGGGTCCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQSAGLP*QGSRSC
Trigger: GCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGA...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGCTCAGCCTCTCATCTaGCCAGCTGGTCCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: SASLILDWRIYRSRGWESAQPLI*PAGPRH
Trigger: GTGGCGGGGACCAGCTGGGCAGATGAGAGGCTGAGC...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGAGATGGGCTTACAGATaGGCGGACAGACAGACAGGT +
Preference number: 4 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRRWAYR*ADRQTG
Trigger: ACCTGTCTGTCTGTCCGCCCATCTGTAAGCCCATCT...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGAGACCAGAGCCGCGATaGTGGCATCCACGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGERPEPR*WHPRVS
Trigger: GCTCACCCGTGGATGCCACCATCGCGGCTCTGGTCT...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGGGCACCATGGAGGATaGGGAACGCTCGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQGHHGG*GTLAWN
Trigger: GTTCCAGGCGAGCGTTCCCCATCCTCCATGGTGCCC...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGTCCTGGGACACAGCCTaGACCACGTTCAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQESWDTA*TTFRKK
Trigger: CTTCTTCCTGAACGTGGTCCAGGCTGTGTCCCAGGA...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR GCA 90 bp CCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGAACTTGGCCAGGTCCTaGAGCGTCAGCTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PQSASLILDWRIYRSRGWNLARS*SVSWLP
Trigger: AGGGAGCCAGCTGACGCTGCAGGACCTGGCCAAGTT...CCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS-3UTR GCA 90 bp AGGCCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGATGCAGGATGGGGGCTaGAATGGCCGCTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: RPQSASLILDWRIYRSRGMQDGG*NGRSQV
Trigger: GACCTGAGAGCGGCCATTGCAGCCCCCATCCTGCAT...CCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS-3UTR CCA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCACAGTAAGAGAAAGATaGTCAGATAGACAATGGGAC +
Preference number: 4 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFTVRER*SDRQWD
Trigger: GTCCCATTGTCTATCTGACCATCTTTCTCTTACTGT...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTCCTCGGGCTGGAACTTaGCCAGGTCCTGCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: SASLILDWRIYRSRGWESPRAGT*PGPAAS
Trigger: TGACGCTGCAGGACCTGGCCAAGTTCCAGCCCGAGG...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTCCCGGGAGGCATTCTaGAGCTTCGGGTGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGESREAF*SFGWLR
Trigger: TCGAAGCCACCCGAAGCTCCAGAATGCCTCCCGGGA...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGTCCCGGGAGGCATTCTaGAGCTTCGGGTGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQSREAF*SFGWLR
Trigger: TCGAAGCCACCCGAAGCTCCAGAATGCCTCCCGGGA...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGAGGAAGAAGGGCCTCTaGGTCTGGTTCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQRKKGL*VWFWPR
Trigger: CCGTGGCCAGAACCAGACCCAGAGGCCCTTCTTCCT...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGCAGCCATGTCCGGCCTaGACACAGGACTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGEQPCPA*TQDSWW
Trigger: CCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTCCTGCCAGAGTAGTTaGTCCCCCAGCCATGTCCGG +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGESCQSS*SPSHVR
Trigger: CCGGACATGGCTGGGGGACCAACTACTCTGGCAGGA...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGTCTCATCTGCCCAGCTaGTCCCCGCCACCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQSHLPS*SPPPLP
Trigger: TGGAAGAGGTGGCGGGGACCAGCTGGGCAGATGAGA...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTCCATGCTCTGAGGGTTaGCGACGCTGGTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: SASLILDWRIYRSRGWESPCSEG*RRWCRP
Trigger: TGGTCTGCACCAGCGTCGTCAACCCTCAGAGCATGG...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTTGTGCAGGAAACGGCTaGGGACAGGGGCCACCACAT +
Preference number: 4 (lower is better)
Translates to: SASLILDWRIYRSRGWESCAGNG*GQGPPH
Trigger: ATGTGGTGGCCCCTGTCCTCAGCCGTTTCCTGCACA...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR TCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTCTGCACCTCCTGGCTaGAGTTGGGCTCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGESAPPG*SWARTP
Trigger: TGGAGTACGAGCCCAACTTCAGCCAGGAGGTGCAGA...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGAGGAAGGCCGCAGGATaGTGTTGTGCAGGAAACGGC +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGERKAAG*CCAGNG
Trigger: GCCGTTTCCTGCACAACAGCATCCTGCGGCCTTCCT...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR GCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGAGGAAGGCCGCAGGATaGTGTTGTGCAGGAAACGGC +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQRKAAG*CCAGNG
Trigger: GCCGTTTCCTGCACAACAGCATCCTGCGGCCTTCCT...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGGTGAGCCCTGCTGCTaGAGGATGGCTCGTCCAATA +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQGEPCC*RMARPI
Trigger: TATTGGACGAGCCATCCTCCAGCAGCAGGGCTCACC...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTAAGGGCCTCTGGGTCTaGTTCTGGCCACGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SASLILDWRIYRSRGWESKGLWV*FWPRSW
Trigger: CCAAGACCGTGGCCAGAACCAGACCCAGAGGCCCTT...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGTACAGATCGAGAGGGTaGGAGAGTGGCCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQYRSRG*ESGPRQ
Trigger: TTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTA...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp CCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGCCCCTTGGCAAACTTaGGCGTCTCTACAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PQSASLILDWRIYRSRGWAPWQT*ASLQGG
Trigger: ACCACCTTGTAGAGACGCTCAAGTTTGCCAAGGGGC...CCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS-3UTR GCA 90 bp AGGCCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGAGTGTCTTAGTAGCCTaGGGCCTCCCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RPQSASLILDWRIYRSRGSVLVA*GLPTLP
Trigger: AGGAAGAGTGGGGAGGCCGCAGGCTACTAAGACACT...CCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS-3UTR CCA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGACAGTAAGAGAAAGATaGTCAGATAGACAATGGGAC +
Preference number: 4 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALTVRER*SDRQWD
Trigger: GTCCCATTGTCTATCTGACCATCTTTCTCTTACTGT...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGACAGTAAGAGAAAGATaGTCAGATAGACAATGGGAC +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPETVRER*SDRQWD
Trigger: GTCCCATTGTCTATCTGACCATCTTTCTCTTACTGT...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTTCCTGCAGCGTCAGCTaGCTCCCTTCCTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: SASLILDWRIYRSRGWESSCSVS*LPSLAM
Trigger: CATTGCCAAGGAAGGGAGCCAGCTGACGCTGCAGGA...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCATCTTTAATCTTGGACTaGAGGATATACAGATCGAGA +
Preference number: 4 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSSLILD*RIYRSR
Trigger: TCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGA...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGACAATGGGACAGAGATaGGCTTACAGATGGGCGGAC +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQTMGQR*AYRWAD
Trigger: GTCCGCCCATCTGTAAGCCCATCTCTGTCCCATTGT...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGTCTCTACAAGGTGGTaGTACACGTTCACCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQVSTRW*YTFTLP
Trigger: AGGGAGGGTGAACGTGTACCACCACCTTGTAGAGAC...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGAGCGTCTCTACAAGGTaGTGGTACACGTTCACCCTC +
Preference number: 4 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQSVSTR*WYTFTL
Trigger: GAGGGTGAACGTGTACCACCACCTTGTAGAGACGCT...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTACACAGGACTCATGGTaGGGCCAGACTTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SASLILDWRIYRSRGWESTQDSW*GQTSAL
Trigger: CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGT...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGTCTTTAATCTTGGACTaGAGGATATACAGATCGAGA +
Preference number: 4 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWSLILD*RIYRSR
Trigger: TCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGA...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGTCTTTAATCTTGGACTaGAGGATATACAGATCGAGA +
Preference number: 4 (lower is better)
Translates to: TSSTLSWTPLPGVQILPESLILD*RIYRSR
Trigger: TCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGA...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR TCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGATGCCTGTCCGTGGTaGATACACCATCGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SASLILDWRIYRSRGWESDACPW*IHHRSK
Trigger: TTTGGAGCGATGGTGTATTCACCACGGACAGGCATC...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTAGCGTCTCTACAAGGTaGTGGTACACGTTCACCCTC +
Preference number: 4 (lower is better)
Translates to: SASLILDWRIYRSRGWESSVSTR*WYTFTL
Trigger: GAGGGTGAACGTGTACCACCACCTTGTAGAGACGCT...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CCA 90 bp CCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGACTAGCTTCGACCCCTaGGCTTTGTTGATCAAGATG +
Preference number: 4 (lower is better)
Translates to: PQSASLILDWRIYRSRGWTSFDP*ALLIKM
Trigger: CATCTTGATCAACAAAGCCCAGGGGTCGAAGCTAGT...CCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS-3UTR CCA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGACTAGCTTCGACCCCTaGGCTTTGTTGATCAAGATG +
Preference number: 4 (lower is better)
Translates to: VRLFNLGLEDIQIERVGETSFDP*ALLIKM
Trigger: CATCTTGATCAACAAAGCCCAGGGGTCGAAGCTAGT...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CCA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGTCTTTAATCTTGGACTaGAGGATATACAGATCGAGA +
Preference number: 4 (lower is better)
Translates to: LDWRIYRSRGWESGPRQESLILD*RIYRSR
Trigger: TCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGA...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CCA 90 bp CCGATCCACTGGGCCCCTGTGCCCAGTGGCAGAGCCTGTGCACACTaGTCCAGCAGGCTCGGGGCGTGGCTGGCCGGCACCGTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PIHWAPVPSGRACAH*SSRLGAWLAGTVSR
Trigger: CCGGGAGACGGTGCCGGCCAGCCACGCCCCGAGCCTGCTGGACCAGTGTGCACAGGCTCTGCCACTGGGCACAGGGGCCCAGTGGATCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327365.10
ENST00000398292.3
CDS CCA 90 bp CCCAGTGGCAGAGCCTGTGCACACTGGTCCAGCAGGCTCGGGGCGTaGCTGGCCGGCACCGTCTCCCGGGCATTGATGACCTCCACCTTC +
Preference number: 5 (lower is better)
Translates to: PSGRACAHWSSRLGA*LAGTVSRALMTSTF
Trigger: GAAGGTGGAGGTCATCAATGCCCGGGAGACGGTGCCGGCCAGCCACGCCCCGAGCCTGCTGGACCAGTGTGCACAGGCTCTGCCACTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327365.10
ENST00000398292.3
CDS CCA 90 bp GCATCTGGCCCAGCCTCCCCGTGTAGAAGACCTCCACGCCCTCTGTaGCCACGGTCTCCAGGGTGGTGGCCAGTGCAGGCCATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: ASGPASPCRRPPRPL*PRSPGWWPVQAMGV
Trigger: CACTCCCATGGCCTGCACTGGCCACCACCCTGGAGACCGTGGCCACAGAGGGCGTGGAGGTCTTCTACACGGGGAGGCTGGGCCAGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS GCA 90 bp AGGATGCTGTTGTGCAGGAAACGGCTGAGGACAGGGGCCACCACATaGCCCCCTCGGAGCAGCGCGATGGTGGGCTGGAACAGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: RMLLCRKRLRTGATT*PPRSSAMVGWNSCA
Trigger: GGCGCAGCTGTTCCAGCCCACCATCGCGCTGCTCCGAGGGGGGCATGTGGTGGCCCCTGTCCTCAGCCGTTTCCTGCACAACAGCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCCGGCCATCGATCTGTaGGCGGATGAGCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: PARGPDPARVVGPPAMSGPAIDL*ADELGQ
Trigger: CTGGCCCAGCTCATCCGCCAACAGATCGATGGCCGG...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CCA 90 bp GCCCTCTGTGGCCACGGTCTCCAGGGTGGTGGCCAGTGCAGGCCATaGGAGTGGGTCCTGAGGCCTCAGGGGTTCTGTCCCGTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: ALCGHGLQGGGQCRP*EWVLRPQGFCPVEE
Trigger: TTCTTCAACGGGACAGAACCCCTGAGGCCTCAGGACCCACTCCCATGGCCTGCACTGGCCACCACCCTGGAGACCGTGGCCACAGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CCA 90 bp CAAGATGGAGGGCACCATGGAGGATGGGGAACGCTCGCCTGGAACTaGGGGCCAGCACCTTCCGGGAGCTCCACCCACCCTGTCTCCACT +
Preference number: 5 (lower is better)
Translates to: QDGGHHGGWGTLAWN*GPAPSGSSTHPVST
Trigger: AGTGGAGACAGGGTGGGTGGAGCTCCCGGAAGGTGCTGGCCCCCAGTTCCAGGCGAGCGTTCCCCATCCTCCATGGTGCCCTCCATCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAAGAGCTGGCGCAGGGTaGACGCCTGCAAGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPRAGAG*TPARKA
Trigger: GGCCTTCCTTGCAGGCGTCAACCCTGCGCCAGCTCT...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTCCGGCCATCGATCTGTaGGCGGATGAGCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPPAIDL*ADELGQ
Trigger: CTGGCCCAGCTCATCCGCCAACAGATCGATGGCCGG...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCGTTCTGGCCACGGTCTaGGAGTCCCCTCTGCACCTC +
Preference number: 5 (lower is better)
Translates to: PARGPDPARVVGPPAMSGVLATV*ESPLHL
Trigger: GAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAAC...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS TCA 90 bp GACGACGCTGGTGCAGACCAGAGCCGCGATGGTGGCATCCACGGGTaGGCCCTGCTGCTGGAGGATGGCTCGTCCAATATCCGAGCAGAC +
Preference number: 5 (lower is better)
Translates to: DDAGADQSRDGGIHG*ALLLEDGSSNIRAD
Trigger: GTCTGCTCGGATATTGGACGAGCCATCCTCCAGCAGCAGGGCTCACCCGTGGATGCCACCATCGCGGCTCTGGTCTGCACCAGCGTCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CCA 90 bp GTTGATCAAGATGGAGGGCACCATGGAGGATGGGGAACGCTCGCCTaGAACTGGGGGCCAGCACCTTCCGGGAGCTCCACCCACCCTGTC +
Preference number: 5 (lower is better)
Translates to: VDQDGGHHGGWGTLA*NWGPAPSGSSTHPV
Trigger: GACAGGGTGGGTGGAGCTCCCGGAAGGTGCTGGCCCCCAGTTCCAGGCGAGCGTTCCCCATCCTCCATGGTGCCCTCCATCTTGATCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CCA 90 bp CGACCCCTGGGCTTTGTTGATCAAGATGGAGGGCACCATGGAGGATaGGGAACGCTCGCCTGGAACTGGGGGCCAGCACCTTCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: RPLGFVDQDGGHHGG*GTLAWNWGPAPSGS
Trigger: GCTCCCGGAAGGTGCTGGCCCCCAGTTCCAGGCGAGCGTTCCCCATCCTCCATGGTGCCCTCCATCTTGATCAACAAAGCCCAGGGGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGGCCGCAGGATGCTGTaGTGCAGGAAACGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPGRRML*CRKRLR
Trigger: CCTCAGCCGTTTCCTGCACAACAGCATCCTGCGGCC...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGAGAGCTGGCGCAGGGTaGACGCCTGCAAGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALRAGAG*TPARKA
Trigger: GGCCTTCCTTGCAGGCGTCAACCCTGCGCCAGCTCT...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCAGGGGTTCTGTCCCGTaGAAGAAGAGCTGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: PARGPDPARVVGPPAMSGRGSVP*KKSWRR
Trigger: CCTGCGCCAGCTCTTCTTCAACGGGACAGAACCCCT...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCAGCTGGCTCCCTTCCTaGGCAATGTCCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: PARGPDPARVVGPPAMSGSWLPS*AMSSTS
Trigger: GCTGGTGGAGGACATTGCCAAGGAAGGGAGCCAGCT...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGGCAGAACCTCGGGCTGGAACTaGGCCAGGTCCTGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: CPAWTQDSWWGQTSALGRTSGWN*ARSCSV
Trigger: GACGCTGCAGGACCTGGCCAAGTTCCAGCCCGAGGT...TCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGACCTCGGGCTGGAACTaGGCCAGGTCCTGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: TSSTLSWTPLPGVQILPETSGWN*ARSCSV
Trigger: GACGCTGCAGGACCTGGCCAAGTTCCAGCCCGAGGT...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGTTCTGGCCACGGTCTaGGAGTCCCCTCTGCACCTC +
Preference number: 5 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSVLATV*ESPLHL
Trigger: GAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAAC...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CCA 90 bp GTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTaGGCAGAGCAGTGTCTTAGTAGCCTGCGGCCTCCCCACTCTTCC +
Preference number: 5 (lower is better)
Translates to: VRPGHRTHGGARLQL*AEQCLSSLRPPHSS
Trigger: GGAAGAGTGGGGAGGCCGCAGGCTACTAAGACACTGCTCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAAGGGGTTCTGTCCCGTaGAAGAAGAGCTGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPRGSVP*KKSWRR
Trigger: CCTGCGCCAGCTCTTCTTCAACGGGACAGAACCCCT...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCACCTCGGGCTGGAACTaGGCCAGGTCCTGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: WRIYRSRGWESGPRQEACTSGWN*ARSCSV
Trigger: GACGCTGCAGGACCTGGCCAAGTTCCAGCCCGAGGT...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTGCTCCAAAGGGTGTGTaGATGGTGCTGGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPAPKGV*MVLVAA
Trigger: GGCTGCCACCAGCACCATCAACACACCCTTTGGAGC...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGGTTCTGGCCACGGTCTaGGAGTCCCCTCTGCACCTC +
Preference number: 5 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEVLATV*ESPLHL
Trigger: GAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAAC...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAACCGTCTCCCGGGCATaGATGACCTCCACCTTCCCT +
Preference number: 5 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSTVSRA*MTSTFP
Trigger: AGGGAAGGTGGAGGTCATCAATGCCCGGGAGACGGT...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327365.10
ENST00000398292.3
CDS GCA 90 bp GTGGGGCCAGACTTCAGCTCTGGGCAGAGCAGTGTCTTAGTAGCCTaGGGCCTCCCCACTCTTCCTCAGGTCCGAGACGGCGTACACACA +
Preference number: 5 (lower is better)
Translates to: VGPDFSSGQSSVLVA*GLPTLPQVRDGVHT
Trigger: TGTGTGTACGCCGTCTCGGACCTGAGGAAGAGTGGGGAGGCCGCAGGCTACTAAGACACTGCTCTGCCCAGAGCTGAAGTCTGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGAGGGGTTCTGTCCCGTaGAAGAAGAGCTGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: TSSTLSWTPLPGVQILPERGSVP*KKSWRR
Trigger: CCTGCGCCAGCTCTTCTTCAACGGGACAGAACCCCT...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGAGCTGGCTCCCTTCCTaGGCAATGTCCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALSWLPS*AMSSTS
Trigger: GCTGGTGGAGGACATTGCCAAGGAAGGGAGCCAGCT...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCTGCCCCTTGGCAAACTaGAGCGTCTCTACAAGGTGG +
Preference number: 5 (lower is better)
Translates to: PARGPDPARVVGPPAMSGCPLAN*SVSTRW
Trigger: CCACCTTGTAGAGACGCTCAAGTTTGCCAAGGGGCA...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCCTCTCCACCTCTGCCCCTaGGCAAACTTGAGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: CQGSRSCQSSWSPSHVRPLHLCP*ANLSVS
Trigger: AGAGACGCTCAAGTTTGCCAAGGGGCAGAGGTGGAG...AGGCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAACACAGCCCTTGCTGTaGACATGCAGGATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSTQPLL*TCRMGA
Trigger: AGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGT...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS GCA 90 bp TTCTGGAGCTTCGGGTGGCTTCGAGGGTCCCCCAGCCTCCACCTCTaGCCCTTGGCAAACTTGAGCGTCTCTACAAGGTGGTGGTACACG +
Preference number: 5 (lower is better)
Translates to: FWSFGWLRGSPSLHL*PLANLSVSTRWWYT
Trigger: CGTGTACCACCACCTTGTAGAGACGCTCAAGTTTGCCAAGGGGCAGAGGTGGAGGCTGGGGGACCCTCGAAGCCACCCGAAGCTCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CCA 90 bp ACAGCCTGGACCACGTTCAGGAAGAAGGGCCTCTGGGTCTGGTTCTaGCCACGGTCTTGGAGTCCCCTCTGCACCTCCTGGCTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: TAWTTFRKKGLWVWF*PRSWSPLCTSWLKL
Trigger: CAACTTCAGCCAGGAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAACCAGACCCAGAGGCCCTTCTTCCTGAACGTGGTCCAGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CCA 90 bp ACAGCCTGGACCACGTTCAGGAAGAAGGGCCTCTGGGTCTGGTTCTaGCCACGGTCTTGGAGTCCCCTCTGCACCTCCTGTAATGCCAGC +
Preference number: 5 (lower is better)
Translates to: TAWTTFRKKGLWVWF*PRSWSPLCTSCNAS
Trigger: GCTGGCATTACAGGAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAACCAGACCCAGAGGCCCTTCTTCCTGAACGTGGTCCAGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425408.5
CDS-3UTR CAA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGGGCCGCAGGATGCTGTaGTGCAGGAAACGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRGRRML*CRKRLR
Trigger: CCTCAGCCGTTTCCTGCACAACAGCATCCTGCGGCC...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGCTCCACCTCTGCCCCTaGGCAAACTTGAGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALLHLCP*ANLSVS
Trigger: AGAGACGCTCAAGTTTGCCAAGGGGCAGAGGTGGAG...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCATCCAGGAGCTCGTTGTaGAGGATGATGCCTGTCCGT +
Preference number: 5 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSSRSSL*RMMPVR
Trigger: ACGGACAGGCATCATCCTCAACAACGAGCTCCTGGA...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAAGTCCAGGAGCTCGTaGTTGAGGATGATGCCTGTC +
Preference number: 5 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFKSRSS*LRMMPV
Trigger: GACAGGCATCATCCTCAACAACGAGCTCCTGGACTT...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCATTCGACCCCTGGGCTTaGTTGATCAAGATGGAGGGC +
Preference number: 5 (lower is better)
Translates to: VPQPCPAWTQDSWWGQTSFDPWA*LIKMEG
Trigger: GCCCTCCATCTTGATCAACAAAGCCCAGGGGTCGAA...TGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCATTCGACCCCTGGGCTTaGTTGATCAAGATGGAGGGC +
Preference number: 5 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPFDPWA*LIKMEG
Trigger: GCCCTCCATCTTGATCAACAAAGCCCAGGGGTCGAA...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGACACAGCCCTTGCTGTaGACATGCAGGATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWTQPLL*TCRMGA
Trigger: AGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGT...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGACCTCCTGGCTGAAGTaGGGCTCGTACTCCACACAG +
Preference number: 5 (lower is better)
Translates to: TSSTLSWTPLPGVQILPETSWLK*GSYSTQ
Trigger: CTGTGTGGAGTACGAGCCCAACTTCAGCCAGGAGGT...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp GGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCTGTTTCTGGCTGAAGTaGGGCTCGTACTCCACACAG +
Preference number: 5 (lower is better)
Translates to: GPPAMSGLDTGLMVGPDFCFWLK*GSYSTQ
Trigger: CTGTGTGGAGTACGAGCCCAACTTCAGCCAGAAACA...GAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425408.5
CDS-3UTR CAA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGTGCCCCTTGGCAAACTaGAGCGTCTCTACAAGGTGG +
Preference number: 5 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALCPLAN*SVSTRW
Trigger: CCACCTTGTAGAGACGCTCAAGTTTGCCAAGGGGCA...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGGCTCCAAAGGGTGTGTaGATGGTGCTGGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRAPKGV*MVLVAA
Trigger: GGCTGCCACCAGCACCATCAACACACCCTTTGGAGC...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGTTCGACCCCTGGGCTTaGTTGATCAAGATGGAGGGC +
Preference number: 5 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALFDPWA*LIKMEG
Trigger: GCCCTCCATCTTGATCAACAAAGCCCAGGGGTCGAA...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCACACAGCCCTTGCTGTaGACATGCAGGATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: WRIYRSRGWESGPRQEACTQPLL*TCRMGA
Trigger: AGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGT...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS GCA 90 bp TGGCTGAAGTTGGGCTCGTACTCCACACAGCCCTTGCTGTTGACATaGAGGATGGGGGCTGCAATGGCCGCTCTCAGGTCAAAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: WLKLGSYSTQPLLLT*RMGAAMAALRSKPS
Trigger: GCTTGGCTTTGACCTGAGAGCGGCCATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTACGAGCCCAACTTCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CCA 90 bp ACGTTCAGGAAGAAGGGCCTCTGGGTCTGGTTCTGGCCACGGTCTTaGAGTCCCCTCTGCACCTCCTGTAATGCCAGCAATTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: TFRKKGLWVWFWPRS*SPLCTSCNASNLGG
Trigger: GCCTCCCAAATTGCTGGCATTACAGGAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAACCAGACCCAGAGGCCCTTCTTCCTGAACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425408.5
CDS-3UTR CAA 90 bp CCTGCCAGGGGTCCAGATCCTGCCAGAGTAGTTGGTCCCCCAGCCATGTCCGGCGACTCTGTTGAGAAGTaGAACCCTCTTAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: PARGPDPARVVGPPAMSGDSVEK*NPLSTL
Trigger: CAACGTGCTAAGAGGGTTCAACTTCTCAACAGAGTC...GCCGGACATGGCTGGGGGACCAACTACTCTGGCAGGATCTGGACCCCTGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGTACTCCACACAGCCCTaGCTGTTGACATGCAGGATG +
Preference number: 5 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALYSTQP*LLTCRM
Trigger: CATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTA...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp ACCTCTTCCACTCTCAGCTGGACTCCCCTGCCAGGGGTCCAGATCCTGCCAGAGTACTCCACACAGCCCTaGCTGTTGACATGCAGGATG +
Preference number: 5 (lower is better)
Translates to: TSSTLSWTPLPGVQILPEYSTQP*LLTCRM
Trigger: CATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTA...CTCTGGCAGGATCTGGACCCCTGGCAGGGGAGTCCAGCTGAGAGTGGAAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS GCA 90 bp CTCGTACTCCACACAGCCCTTGCTGTTGACATGCAGGATGGGGGCTaGAATGGCCGCTCTCAGGTCAAAGCCAAGCCACAGCTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: LVLHTALAVDMQDGG*NGRSQVKAKPQLAH
Trigger: ATGAGCAAGCTGTGGCTTGGCTTTGACCTGAGAGCGGCCATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CCA 90 bp AGCCTCCACCTCTGCCCCTTGGCAAACTTGAGCGTCTCTACAAGGTaGTGGTACACGTTCACCCTCCCTTCAGGCCTGGCCATAGACTCT +
Preference number: 5 (lower is better)
Translates to: SLHLCPLANLSVSTR*WYTFTLPSGLAIDS
Trigger: AGAGTCTATGGCCAGGCCTGAAGGGAGGGTGAACGTGTACCACCACCTTGTAGAGACGCTCAAGTTTGCCAAGGGGCAGAGGTGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGTGCCCCTTGGCAAACTaGAGCGTCTCTACAAGGTGG +
Preference number: 5 (lower is better)
Translates to: WTGGYTDREGGRVAPGKRCPLAN*SVSTRW
Trigger: CCACCTTGTAGAGACGCTCAAGTTTGCCAAGGGGCA...CCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp AGGCCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGCCGGCCATCGATCTGTaGGCGGATGAGCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RPQSASLILDWRIYRSRGPAIDL*ADELGQ
Trigger: CTGGCCCAGCTCATCCGCCAACAGATCGATGGCCGG...CCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS CCA 90 bp CTCCACCTCTGCCCCTTGGCAAACTTGAGCGTCTCTACAAGGTGGTaGTACACGTTCACCCTCCCTTCAGGCCTGGCCATAGACTCTGTT +
Preference number: 5 (lower is better)
Translates to: LHLCPLANLSVSTRW*YTFTLPSGLAIDSV
Trigger: AACAGAGTCTATGGCCAGGCCTGAAGGGAGGGTGAACGTGTACCACCACCTTGTAGAGACGCTCAAGTTTGCCAAGGGGCAGAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGGGCCGCAGGATGCTGTaGTGCAGGAAACGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: VRLFNLGLEDIQIERVGEGRRML*CRKRLR
Trigger: CCTCAGCCGTTTCCTGCACAACAGCATCCTGCGGCC...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGACTCTGTTGAGAAGTaGAACCCTCTTAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALDSVEK*NPLSTL
Trigger: CAACGTGCTAAGAGGGTTCAACTTCTCAACAGAGTC...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGTCCAGGAGCTCGTTGTaGAGGATGATGCCTGTCCGT +
Preference number: 5 (lower is better)
Translates to: LDWRIYRSRGWESGPRQESRSSL*RMMPVR
Trigger: ACGGACAGGCATCATCCTCAACAACGAGCTCCTGGA...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGGTTCTGGCCACGGTCTaGGAGTCCCCTCTGCACCTC +
Preference number: 5 (lower is better)
Translates to: VRLFNLGLEDIQIERVGEVLATV*ESPLHL
Trigger: GAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAAC...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GTAGTTGGTCCCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCATCCGCCTCTTTAATCTaGGACTGGAGGATATACAGA +
Preference number: 5 (lower is better)
Translates to: VVGPPAMSGLDTGLMVGPSASLI*DWRIYR
Trigger: TCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA...TGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGGGACCAACTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGAGCTGGCTCCCTTCCTaGGCAATGTCCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: VRLFNLGLEDIQIERVGESWLPS*AMSSTS
Trigger: GCTGGTGGAGGACATTGCCAAGGAAGGGAGCCAGCT...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCTCCAAAGGGTGTGTaGATGGTGCTGGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQAPKGV*MVLVAA
Trigger: GGCTGCCACCAGCACCATCAACACACCCTTTGGAGC...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGAAGTCCAGGAGCTCGTaGTTGAGGATGATGCCTGTC +
Preference number: 5 (lower is better)
Translates to: LDWRIYRSRGWESGPRQEKSRSS*LRMMPV
Trigger: GACAGGCATCATCCTCAACAACGAGCTCCTGGACTT...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp CAGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGTCCGCCTCTTTAATCTaGGACTGGAGGATATACAGA +
Preference number: 5 (lower is better)
Translates to: QPCPAWTQDSWWGQTSALSASLI*DWRIYR
Trigger: TCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA...CAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp AGCCATGTCCGGCCTGGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTGGTCCGCCTCTTTAATCTaGGACTGGAGGATATACAGA +
Preference number: 5 (lower is better)
Translates to: SHVRPGHRTHGGARLQLWSASLI*DWRIYR
Trigger: TCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA...CCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGACCGTCTCCCGGGCATaGATGACCTCCACCTTCCCT +
Preference number: 5 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQTVSRA*MTSTFP
Trigger: AGGGAAGGTGGAGGTCATCAATGCCCGGGAGACGGT...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGCCTGCAACCCTCTTAGCACGTaGAGGATAAAGCTGAGAATG +
Preference number: 5 (lower is better)
Translates to: WRIYRSRGWESGPRQEACNPLST*RIKLRM
Trigger: CATTCTCAGCTTTATCCTCAACGTGCTAAGAGGGTT...GCAGGCCTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGCTCCACCTCTGCCCCTaGGCAAACTTGAGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQLHLCP*ANLSVS
Trigger: AGAGACGCTCAAGTTTGCCAAGGGGCAGAGGTGGAG...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGCTCCAAAGGGTGTGTaGATGGTGCTGGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SASLILDWRIYRSRGWESAPKGV*MVLVAA
Trigger: GGCTGCCACCAGCACCATCAACACACCCTTTGGAGC...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGACACAGCCCTTGCTGTaGACATGCAGGATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQTQPLL*TCRMGA
Trigger: AGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGT...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp AGGCCACAGTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGACCTCCTGGCTGAAGTaGGGCTCGTACTCCACACAG +
Preference number: 5 (lower is better)
Translates to: RPQSASLILDWRIYRSRGTSWLK*GSYSTQ
Trigger: CTGTGTGGAGTACGAGCCCAACTTCAGCCAGGAGGT...CCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGACTGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263112.11
CDS-3UTR CAA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGACCTCCTGGCTGAAGTaGGGCTCGTACTCCACACAG +
Preference number: 5 (lower is better)
Translates to: VRLFNLGLEDIQIERVGETSWLK*GSYSTQ
Trigger: CTGTGTGGAGTACGAGCCCAACTTCAGCCAGGAGGT...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGGCAAGAGGACTCTGTTGAGAAGTaGAACCCTCTTAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: LDWRIYRSRGWESGPRQEDSVEK*NPLSTL
Trigger: CAACGTGCTAAGAGGGTTCAACTTCTCAACAGAGTC...CTCTTGCCTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTTCCAGGAGCTCGTTGTaGAGGATGATGCCTGTCCGT +
Preference number: 5 (lower is better)
Translates to: SASLILDWRIYRSRGWESSRSSL*RMMPVR
Trigger: ACGGACAGGCATCATCCTCAACAACGAGCTCCTGGA...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGAAGTCCAGGAGCTCGTaGTTGAGGATGATGCCTGTC +
Preference number: 5 (lower is better)
Translates to: VRLFNLGLEDIQIERVGEKSRSS*LRMMPV
Trigger: GACAGGCATCATCCTCAACAACGAGCTCCTGGACTT...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTTTCGACCCCTGGGCTTaGTTGATCAAGATGGAGGGC +
Preference number: 5 (lower is better)
Translates to: SASLILDWRIYRSRGWESFDPWA*LIKMEG
Trigger: GCCCTCCATCTTGATCAACAAAGCCCAGGGGTCGAA...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp TTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTGGCCCCAGTACTCCACACAGCCCTaGCTGTTGACATGCAGGATG +
Preference number: 5 (lower is better)
Translates to: FNLGLEDIQIERVGEWPQYSTQP*LLTCRM
Trigger: CATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTA...CTGGGGCCACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTACTCCACACAGCCCTaGCTGTTGACATGCAGGATG +
Preference number: 5 (lower is better)
Translates to: VRLFNLGLEDIQIERVGEYSTQP*LLTCRM
Trigger: CATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTA...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS-3UTR CAA 90 bp GTCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGAACCCTCTTAGCACGTaGAGGATAAAGCTGAGAATG +
Preference number: 5 (lower is better)
Translates to: VRLFNLGLEDIQIERVGENPLST*RIKLRM
Trigger: CATTCTCAGCTTTATCCTCAACGTGCTAAGAGGGTT...CTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS-3UTR CAA 90 bp TCCGCCTCTTTAATCTTGGACTGGAGGATATACAGATCGAGAGGGTGGGAGAGTAACCCTCTTAGCACGTaGAGGATAAAGCTGAGAATG +
Preference number: 5 (lower is better)
Translates to: SASLILDWRIYRSRGWESNPLST*RIKLRM
Trigger: CATTCTCAGCTTTATCCTCAACGTGCTAAGAGGGTT...ACTCTCCCACCCTCTCGATCTGTATATCCTCCAGTCCAAGATTAAAGAGGCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS TCA 90 bp AAAATCTGTAGGGCAAGCCAGCAGGCTATAAATTCAGGTAAGAGTTaGTCTCGAAGTCTGGAACCTAACATCTGTAGAGCAGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: KICRASQQAINSGKS*SRSLEPNICRAVSR
Trigger: CCTGCTGACTGCTCTACAGATGTTAGGTTCCAGACTTCGAGATCAACTCTTACCTGAATTTATAGCCTGCTGGCTTGCCCTACAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623756.1
CDS GCA 90 bp AAACTCAGGCAGGGTTTGTGTGTTATAGTGTTGAAGCAGAATTCCTaGTTCTCTGGGAAACCTCAGTTTTTGTTCTTACGGCCTTCAACT +
Preference number: 5 (lower is better)
Translates to: KLRQGLCVIVLKQNS*FSGKPQFLFLRPST
Trigger: AGTTGAAGGCCGTAAGAACAAAAACTGAGGTTTCCCAGAGAAGCAGGAATTCTGCTTCAACACTATAACACACAAACCCTGCCTGAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623756.1
CDS CCA 72 bp GGGCACCATGGAGGATGGGGAACGCTCGCCTGGAACTaGGGGCCAGCACCTTCCGGGAGCTCCACCCACCCT +
Preference number: 6 (lower is better)
Translates to: GHHGGWGTLAWN*GPAPSGSSTHP
Trigger: AGGGTGGGTGGAGCTCCCGGAAGGTGCTGGCCCCCAGTTCCAGGCGAGCGTTCCCCATCCTCCATGGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CCA 72 bp AGAGCCTGTGCACACTGGTCCAGCAGGCTCGGGGCGTaGCTGGCCGGCACCGTCTCCCGGGCATTGATGACC +
Preference number: 6 (lower is better)
Translates to: RACAHWSSRLGA*LAGTVSRALMT
Trigger: GGTCATCAATGCCCGGGAGACGGTGCCGGCCAGCCACGCCCCGAGCCTGCTGGACCAGTGTGCACAGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327365.10
ENST00000398292.3
CDS CCA 72 bp GATGGAGGGCACCATGGAGGATGGGGAACGCTCGCCTaGAACTGGGGGCCAGCACCTTCCGGGAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: DGGHHGGWGTLA*NWGPAPSGSST
Trigger: GGTGGAGCTCCCGGAAGGTGCTGGCCCCCAGTTCCAGGCGAGCGTTCCCCATCCTCCATGGTGCCCTCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CAA 72 bp GGCACCTCCAGGGCATCCACCACCTCGGGCTGGAACTaGGCCAGGTCCTGCAGCGTCAGCTGGCTCCCTTCC +
Preference number: 6 (lower is better)
Translates to: GTSRASTTSGWN*ARSCSVSWLPS
Trigger: GGAAGGGAGCCAGCTGACGCTGCAGGACCTGGCCAAGTTCCAGCCCGAGGTGGTGGATGCCCTGGAGGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS TCA 72 bp ATGGTGAAGATGACCCCTCCGCCCAGGCCCATGCTCTaGGGGTTGACGACGCTGGTGCAGACCAGAGCCGCG +
Preference number: 6 (lower is better)
Translates to: MVKMTPPPRPML*GLTTLVQTRAA
Trigger: CGCGGCTCTGGTCTGCACCAGCGTCGTCAACCCTCAGAGCATGGGCCTGGGCGGAGGGGTCATCTTCACCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS TCA 72 bp GGTGCAGACCAGAGCCGCGATGGTGGCATCCACGGGTaGGCCCTGCTGCTGGAGGATGGCTCGTCCAATATC +
Preference number: 6 (lower is better)
Translates to: GADQSRDGGIHG*ALLLEDGSSNI
Trigger: GATATTGGACGAGCCATCCTCCAGCAGCAGGGCTCACCCGTGGATGCCACCATCGCGGCTCTGGTCTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS TCA 72 bp GGAGTGGGTCCTGAGGCCTCAGGGGTTCTGTCCCGTTaGAGAAGAGCTGGCGCAGGGTTGACGCCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: GVGPEASGVLSR*RRAGAGLTPAR
Trigger: CCTTGCAGGCGTCAACCCTGCGCCAGCTCTTCTTCAACGGGACAGAACCCCTGAGGCCTCAGGACCCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS GCA 72 bp AGAGCCGCGATGGTGGCATCCACGGGTGAGCCCTGCTaGTGGAGGATGGCTCGTCCAATATCCGAGCAGACC +
Preference number: 6 (lower is better)
Translates to: RAAMVASTGEPC*WRMARPISEQT
Trigger: GGTCTGCTCGGATATTGGACGAGCCATCCTCCAGCAGCAGGGCTCACCCGTGGATGCCACCATCGCGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS GCA 72 bp ACCAGAGCCGCGATGGTGGCATCCACGGGTGAGCCCTaGTGCTGGAGGATGGCTCGTCCAATATCCGAGCAG +
Preference number: 6 (lower is better)
Translates to: TRAAMVASTGEP*CWRMARPISEQ
Trigger: CTGCTCGGATATTGGACGAGCCATCCTCCAGCAGCAGGGCTCACCCGTGGATGCCACCATCGCGGCTCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS GCA 72 bp GCATCCACCACCTCGGGCTGGAACTTGGCCAGGTCCTaGAGCGTCAGCTGGCTCCCTTCCTTGGCAATGTCC +
Preference number: 6 (lower is better)
Translates to: ASTTSGWNLARS*SVSWLPSLAMS
Trigger: GGACATTGCCAAGGAAGGGAGCCAGCTGACGCTGCAGGACCTGGCCAAGTTCCAGCCCGAGGTGGTGGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CCA 72 bp GCCTGGACCACGTTCAGGAAGAAGGGCCTCTGGGTCTaGTTCTGGCCACGGTCTTGGAGTCCCCTCTGCACC +
Preference number: 6 (lower is better)
Translates to: AWTTFRKKGLWV*FWPRSWSPLCT
Trigger: GGTGCAGAGGGGACTCCAAGACCGTGGCCAGAACCAGACCCAGAGGCCCTTCTTCCTGAACGTGGTCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CCA 72 bp CCCCAGCCATGTCCGGCCTGGACACAGGACTCATGGTaGGGCCAGACTTCAGCTCTGGGCAGAGCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: PQPCPAWTQDSW*GQTSALGRAVS
Trigger: AGACACTGCTCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCCAGGCCGGACATGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CCA 72 bp AAGAAGGGCCTCTGGGTCTGGTTCTGGCCACGGTCTTaGAGTCCCCTCTGCACCTCCTGGCTGAAGTTGGGC +
Preference number: 6 (lower is better)
Translates to: KKGLWVWFWPRS*SPLCTSWLKLG
Trigger: GCCCAACTTCAGCCAGGAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAACCAGACCCAGAGGCCCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CCA 72 bp GGACACAGGACTCATGGTGGGGCCAGACTTCAGCTCTaGGCAGAGCAGTGTCTTAGTAGCCTGCGGCCTCCC +
Preference number: 6 (lower is better)
Translates to: GHRTHGGARLQL*AEQCLSSLRPP
Trigger: GGGAGGCCGCAGGCTACTAAGACACTGCTCTGCCCAGAGCTGAAGTCTGGCCCCACCATGAGTCCTGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CAA 72 bp AGGGTTGACGCCTGCAAGGAAGGCCGCAGGATGCTGTaGTGCAGGAAACGGCTGAGGACAGGGGCCACCACA +
Preference number: 6 (lower is better)
Translates to: RVDACKEGRRML*CRKRLRTGATT
Trigger: TGTGGTGGCCCCTGTCCTCAGCCGTTTCCTGCACAACAGCATCCTGCGGCCTTCCTTGCAGGCGTCAACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CAA 72 bp GAAGAAGGGCCTCTGGGTCTGGTTCTGGCCACGGTCTaGGAGTCCCCTCTGCACCTCCTGGCTGAAGTTGGG +
Preference number: 6 (lower is better)
Translates to: EEGPLGLVLATV*ESPLHLLAEVG
Trigger: CCCAACTTCAGCCAGGAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAACCAGACCCAGAGGCCCTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CAA 90 bp CTCTGCACCTCCTGGCTGAAGTTGGGCTCGTACTCCACACAGCCCTaGCTGTTGACATGCAGGATGGGGGCTGCAATGGCCGCTCTCAGG +
Preference number: 6 (lower is better)
Translates to: LCTSWLKLGSYSTQP*LLTCRMGAAMAALR
Trigger: CCTGAGAGCGGCCATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTACGAGCCCAACTTCAGCCAGGAGGTGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CCA 72 bp GGCTTTGTTGATCAAGATGGAGGGCACCATGGAGGATaGGGAACGCTCGCCTGGAACTGGGGGCCAGCACCT +
Preference number: 6 (lower is better)
Translates to: GFVDQDGGHHGG*GTLAWNWGPAP
Trigger: AGGTGCTGGCCCCCAGTTCCAGGCGAGCGTTCCCCATCCTCCATGGTGCCCTCCATCTTGATCAACAAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CAA 90 bp GTGCCGGAACCCCGGGGGCATCGCTCGCATAAGTCCAGGAGCTCGTaGTTGAGGATGATGCCTGTCCGTGGTGAATACACCATCGCTCCA +
Preference number: 6 (lower is better)
Translates to: VPEPRGHRSHKSRSS*LRMMPVRGEYTIAP
Trigger: TGGAGCGATGGTGTATTCACCACGGACAGGCATCATCCTCAACAACGAGCTCCTGGACTTATGCGAGCGATGCCCCCGGGGTTCCGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS GCA 72 bp GTCCCGTTGAAGAAGAGCTGGCGCAGGGTTGACGCCTaGAAGGAAGGCCGCAGGATGCTGTTGTGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: VPLKKSWRRVDA*KEGRRMLLCRK
Trigger: TTTCCTGCACAACAGCATCCTGCGGCCTTCCTTGCAGGCGTCAACCCTGCGCCAGCTCTTCTTCAACGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS GCA 72 bp CACACAGCCCTTGCTGTTGACATGCAGGATGGGGGCTaGAATGGCCGCTCTCAGGTCAAAGCCAAGCCACAG +
Preference number: 6 (lower is better)
Translates to: HTALAVDMQDGG*NGRSQVKAKPQ
Trigger: CTGTGGCTTGGCTTTGACCTGAGAGCGGCCATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS GCA 72 bp TTGGGCTCGTACTCCACACAGCCCTTGCTGTTGACATaGAGGATGGGGGCTGCAATGGCCGCTCTCAGGTCA +
Preference number: 6 (lower is better)
Translates to: LGSYSTQPLLLT*RMGAAMAALRS
Trigger: TGACCTGAGAGCGGCCATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTACGAGCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CCA 72 bp CTCTGCCCCTTGGCAAACTTGAGCGTCTCTACAAGGTaGTGGTACACGTTCACCCTCCCTTCAGGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: LCPLANLSVSTR*WYTFTLPSGLA
Trigger: GGCCAGGCCTGAAGGGAGGGTGAACGTGTACCACCACCTTGTAGAGACGCTCAAGTTTGCCAAGGGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CAA 72 bp CCCCGGGGGCATCGCTCGCATAAGTCCAGGAGCTCGTaGTTGAGGATGATGCCTGTCCGTGGTGAATACACC +
Preference number: 6 (lower is better)
Translates to: PRGHRSHKSRSS*LRMMPVRGEYT
Trigger: GGTGTATTCACCACGGACAGGCATCATCCTCAACAACGAGCTCCTGGACTTATGCGAGCGATGCCCCCGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CAA 72 bp CCAGCCCCGCCAATCACTAGCTTCGACCCCTGGGCTTaGTTGATCAAGATGGAGGGCACCATGGAGGATGGG +
Preference number: 6 (lower is better)
Translates to: PAPPITSFDPWA*LIKMEGTMEDG
Trigger: CCCATCCTCCATGGTGCCCTCCATCTTGATCAACAAAGCCCAGGGGTCGAAGCTAGTGATTGGCGGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CAA 72 bp CTGAAGTTGGGCTCGTACTCCACACAGCCCTTGCTGTaGACATGCAGGATGGGGGCTGCAATGGCCGCTCTC +
Preference number: 6 (lower is better)
Translates to: LKLGSYSTQPLL*TCRMGAAMAAL
Trigger: GAGAGCGGCCATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTACGAGCCCAACTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CAA 72 bp TCCTGGCTGAAGTTGGGCTCGTACTCCACACAGCCCTaGCTGTTGACATGCAGGATGGGGGCTGCAATGGCC +
Preference number: 6 (lower is better)
Translates to: SWLKLGSYSTQP*LLTCRMGAAMA
Trigger: GGCCATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTACGAGCCCAACTTCAGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CAA 90 bp CCGGAACCCCGGGGGCATCGCTCGCATAAGTCCAGGAGCTCGTTGTaGAGGATGATGCCTGTCCGTGGTGAATACACCATCGCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: PEPRGHRSHKSRSSL*RMMPVRGEYTIAPK
Trigger: CTTTGGAGCGATGGTGTATTCACCACGGACAGGCATCATCCTCAACAACGAGCTCCTGGACTTATGCGAGCGATGCCCCCGGGGTTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CAA 90 bp ACCTCCTGGCTGAAGTTGGGCTCGTACTCCACACAGCCCTTGCTGTaGACATGCAGGATGGGGGCTGCAATGGCCGCTCTCAGGTCAAAG +
Preference number: 6 (lower is better)
Translates to: TSWLKLGSYSTQPLL*TCRMGAAMAALRSK
Trigger: CTTTGACCTGAGAGCGGCCATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTACGAGCCCAACTTCAGCCAGGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CAA 90 bp AGATCCTGTTTCTGGCTGAAGTTGGGCTCGTACTCCACACAGCCCTaGCTGTTGACATGCAGGATGGGGGCTGCAATGGCCGCTCTCAGG +
Preference number: 6 (lower is better)
Translates to: RSCFWLKLGSYSTQP*LLTCRMGAAMAALR
Trigger: CCTGAGAGCGGCCATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTACGAGCCCAACTTCAGCCAGAAACAGGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425408.5
CDS CCA 72 bp AAGAAGGGCCTCTGGGTCTGGTTCTGGCCACGGTCTTaGAGTCCCCTCTGCACCTCCTGTAATGCCAGCAAT +
Preference number: 6 (lower is better)
Translates to: KKGLWVWFWPRS*SPLCTSCNASN
Trigger: ATTGCTGGCATTACAGGAGGTGCAGAGGGGACTCCAAGACCGTGGCCAGAACCAGACCCAGAGGCCCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425408.5
CDS CAA 72 bp TTCTGGCTGAAGTTGGGCTCGTACTCCACACAGCCCTaGCTGTTGACATGCAGGATGGGGGCTGCAATGGCC +
Preference number: 6 (lower is better)
Translates to: FWLKLGSYSTQP*LLTCRMGAAMA
Trigger: GGCCATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTACGAGCCCAACTTCAGCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425408.5
CDS CAA 90 bp TGTTTCTGGCTGAAGTTGGGCTCGTACTCCACACAGCCCTTGCTGTaGACATGCAGGATGGGGGCTGCAATGGCCGCTCTCAGGTCAAAG +
Preference number: 6 (lower is better)
Translates to: CFWLKLGSYSTQPLL*TCRMGAAMAALRSK
Trigger: CTTTGACCTGAGAGCGGCCATTGCAGCCCCCATCCTGCATGTCAACAGCAAGGGCTGTGTGGAGTACGAGCCCAACTTCAGCCAGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425408.5
CDS CCA 72 bp TGCCCCTTGGCAAACTTGAGCGTCTCTACAAGGTGGTaGTACACGTTCACCCTCCCTTCAGGCCTGGCCATA +
Preference number: 6 (lower is better)
Translates to: CPLANLSVSTRW*YTFTLPSGLAI
Trigger: TATGGCCAGGCCTGAAGGGAGGGTGAACGTGTACCACCACCTTGTAGAGACGCTCAAGTTTGCCAAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
CDS CAA 72 bp CTGGGCAATGCAGCAAGATCCTGTTTCTGGCTGAAGTaGGGCTCGTACTCCACACAGCCCTTGCTGTTGACA +
Preference number: 6 (lower is better)
Translates to: LGNAARSCFWLK*GSYSTQPLLLT
Trigger: TGTCAACAGCAAGGGCTGTGTGGAGTACGAGCCCAACTTCAGCCAGAAACAGGATCTTGCTGCATTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425408.5
CDS TCA 72 bp CAGGAGCTCGTTGTTGAGGATGATGCCTGTCCGTGGTaGATACACCATCGCTCCAAAGGGTGTGTTGATGGT +
Preference number: 6 (lower is better)
Translates to: QELVVEDDACPW*IHHRSKGCVDG
Trigger: ACCATCAACACACCCTTTGGAGCGATGGTGTATTCACCACGGACAGGCATCATCCTCAACAACGAGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263112.11
ENST00000327365.10
ENST00000398292.3
ENST00000425408.5
CDS CAA 72 bp AAGCAGAATTCCTGCTTCTCTGGGAAACCTCAGTTTTaGTTCTTACGGCCTTCAACTGATTGGAGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: KQNSCFSGKPQF*FLRPSTDWRWP
Trigger: GGGCCACCTCCAATCAGTTGAAGGCCGTAAGAACAAAAACTGAGGTTTCCCAGAGAAGCAGGAATTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623756.1
CDS CAA 72 bp GTAGAGCAGTCAGCAGGCCAGAAACTCAGGCAGGGTTaGTGTGTTATAGTGTTGAAGCAGAATTCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: VEQSAGQKLRQG*CVIVLKQNSCF
Trigger: GAAGCAGGAATTCTGCTTCAACACTATAACACACAAACCCTGCCTGAGTTTCTGGCCTGCTGACTGCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623756.1
CDS CAA 90 bp CAGTCAGCAGGCCAGAAACTCAGGCAGGGTTTGTGTGTTATAGTGTaGAAGCAGAATTCCTGCTTCTCTGGGAAACCTCAGTTTTTGTTC +
Preference number: 6 (lower is better)
Translates to: QSAGQKLRQGLCVIV*KQNSCFSGKPQFLF
Trigger: GAACAAAAACTGAGGTTTCCCAGAGAAGCAGGAATTCTGCTTCAACACTATAACACACAAACCCTGCCTGAGTTTCTGGCCTGCTGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623756.1
CDS CAA 90 bp CTAACATCTGTAGAGCAGTCAGCAGGCCAGAAACTCAGGCAGGGTTaGTGTGTTATAGTGTTGAAGCAGAATTCCTGCTTCTCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: LTSVEQSAGQKLRQG*CVIVLKQNSCFSGK
Trigger: TTTCCCAGAGAAGCAGGAATTCTGCTTCAACACTATAACACACAAACCCTGCCTGAGTTTCTGGCCTGCTGACTGCTCTACAGATGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623756.1
CDS TCA 72 bp AGGGCAAGCCAGCAGGCTATAAATTCAGGTAAGAGTTaGTCTCGAAGTCTGGAACCTAACATCTGTAGAGCA +
Preference number: 6 (lower is better)
Translates to: RASQQAINSGKS*SRSLEPNICRA
Trigger: TGCTCTACAGATGTTAGGTTCCAGACTTCGAGATCAACTCTTACCTGAATTTATAGCCTGCTGGCTTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623756.1
CDS GCA 72 bp CAGGGTTTGTGTGTTATAGTGTTGAAGCAGAATTCCTaGTTCTCTGGGAAACCTCAGTTTTTGTTCTTACGG +
Preference number: 6 (lower is better)
Translates to: QGLCVIVLKQNS*FSGKPQFLFLR
Trigger: CCGTAAGAACAAAAACTGAGGTTTCCCAGAGAAGCAGGAATTCTGCTTCAACACTATAACACACAAACCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623756.1