RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GGNBP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000278311

Ensembl transcript IDs: ENST00000611219.1, ENST00000612563.1, ENST00000613102.5, ENST00000615952.1, ENST00000616019.1, ENST00000617860.4, ENST00000618837.4, ENST00000619573.1, ENST00000620927.1, ENST00000621686.2, ENST00000632104.1, ENST00000632601.1, ENST00000632761.1, ENST00000633235.1, ENST00000633649.1, ENST00000633758.1, ENST00000633767.1, ENST00000633772.1

Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAAGGAAAATCTGGAGAGAGGGAGTGCGTACGGAGCTCTGGGCTTaGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTT +
Preference number: 1 (lower is better)
Translates to: RRKIWREGVRTELWA*GRQRLPSHPLQRRV
Trigger: AACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCGTACGCACTCCCTCTCTCCAGATTTTCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR GCA 90 bp AAGTTGGCCATTTTAAAGTGCTATATGACAGATGTATTAATGTGCTaGATTCACAAAGGTGGTTATGTGAATATACCAAGAACTAGTGTC +
Preference number: 1 (lower is better)
Translates to: KLAILKCYMTDVLMC*IHKGGYVNIPRTSV
Trigger: GACACTAGTTCTTGGTATATTCACATAACCACCTTTGTGAATGCAGCACATTAATACATCTGTCATATAGCACTTTAAAATGGCCAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR CAA 90 bp AAGAAGGAAAATCTGGAGAGAGGGAGTGCGTACGGAGCTCTGGGCTaGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGT +
Preference number: 2 (lower is better)
Translates to: KKENLERGSAYGALG*GPTEVTEPPTAKAS
Trigger: ACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCGTACGCACTCCCTCTCTCCAGATTTTCCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR GCA 90 bp AGCCTCCCCGAGGGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGATACCGAGCCACCCACTaGAAAGGCGAGTTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: SLPEGRWFLYGVGPKRPRYRATH*KGEFVG
Trigger: CCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTA...TCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACCCTCGGGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR GCA 90 bp GGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGATCCTTCAACCCCTCTGGAGAGAGGGAGTaGGTACGGAGCTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: GRWFLYGVGPKRPRSFNPSGERE*VRSSGL
Trigger: AAGCCCAGAGCTCCGTACGCACTCCCTCTCTCCAGA...GGGGTTGAAGGATCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR TCA 90 bp AGCCTCCCCGAGGGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGACCTTCAACCCCTCTCTaGGATGTGTGCTTTGACAAA +
Preference number: 2 (lower is better)
Translates to: SLPEGRWFLYGVGPKRPRPSTPL*DVCFDK
Trigger: TTTGTCAAAGCACACATCTCAGAGAGGGGTTGAAGG...TCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACCCTCGGGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR TCA 90 bp ACACAGGTAGCAGTGCAGCTGCGACATTACCAGGTAATTAAGCCTCCCCGAGGGCTGAGATGTGTGCTTTaGCAAAAGCAGCGTCTCCTA +
Preference number: 2 (lower is better)
Translates to: TQVAVQLRHYQVIKPPRGLRCVL*QKQRLL
Trigger: TAGGAGACGCTGCTTTTGTCAAAGCACACATCTCAG...CCCTCGGGGAGGCTTAATTACCTGGTAATGTCGCAGCTGCACTGCTACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR CCA 90 bp CCACAGTACAATAAAAGCAAAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCACGGAGCTCTGGGCTTaGGGCCGACAGAGGTTACCG +
Preference number: 2 (lower is better)
Translates to: PQYNKSKIQPPDTVQSKFTELWA*GRQRLP
Trigger: CGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCGT...GAACTTACTTTGCACTGTATCTGGCGGTTGAATTTTGCTTTTATTGTACTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR CCA 90 bp CAGTGCAAAGTAAGTTCCATACTAAACCACATTGCAAGGTTACATCTTTTTCAGGTGCGTACGGAGCTCTaGGCTTGGGGCCGACAGAGG +
Preference number: 2 (lower is better)
Translates to: QCKVSSILNHIARLHLFQVRTEL*AWGRQR
Trigger: CCTCTGTCGGCCCCAAGCCCAGAGCTCCGTACGCAC...CTGAAAAAGATGTAACCTTGCAATGTGGTTTAGTATGGAACTTACTTTGCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR CCA 90 bp GTGCAAAGTAAGTTCCATACTAAACCACATTGCAAGGTTACATCTTTTTCAGTGGTGCGTACGGAGCTCTaGGCTTGGGGCCGACAGAGG +
Preference number: 2 (lower is better)
Translates to: VQSKFHTKPHCKVTSFSVVRTEL*AWGRQR
Trigger: CCTCTGTCGGCCCCAAGCCCAGAGCTCCGTACGCAC...CACTGAAAAAGATGTAACCTTGCAATGTGGTTTAGTATGGAACTTACTTTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR GCA 90 bp AAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCCATACTAAACCACATTGCATCTGGAGAGAGGGAGTaGGTACGGAGCTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: KFNRQIQCKVSSILNHIASGERE*VRSSGL
Trigger: AAGCCCAGAGCTCCGTACGCACTCCCTCTCTCCAGA...TGCAATGTGGTTTAGTATGGAACTTACTTTGCACTGTATCTGGCGGTTGAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR CCA 90 bp CCACAGTACAATAAAAGCAAAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCGCAAAGGCGAGTTTGTaGGGCCTGCTGAAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: PQYNKSKIQPPDTVQSKFAKASL*GLLKRR
Trigger: CCTTCTCTTCAGCAGGCCCCACAAACTCGCCTTTGC...GAACTTACTTTGCACTGTATCTGGCGGTTGAATTTTGCTTTTATTGTACTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR CCA 90 bp GTGCAAAGTAAGTTCCATACTAAACCACATTGCAAGGTTACATCTTTTTCAGTGCTCCCCGAGGGTAGGTaGTTTCTGTATGGGGTAGGC +
Preference number: 2 (lower is better)
Translates to: VQSKFHTKPHCKVTSFSVLPEGR*FLYGVG
Trigger: GCCTACCCCATACAGAAACCACCTACCCTCGGGGAG...CACTGAAAAAGATGTAACCTTGCAATGTGGTTTAGTATGGAACTTACTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR GCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTATCATATGGCAGGCCTaGGCAGCCACGCAACTAAAG +
Preference number: 2 (lower is better)
Translates to: TLRFNITSKHFASGCLLCIIWQA*AATQLK
Trigger: CTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGAT...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
3UTR-3UTR TCA 90 bp AAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCCATACTAAACCACATTGCAGAAGAAAGCCCGTTTTaGAGAAAGGGCCTAGCAATA +
Preference number: 2 (lower is better)
Translates to: KFNRQIQCKVSSILNHIAEESPF*RKGLAI
Trigger: TATTGCTAGGCCCTTTCTTCAAAACGGGCTTTCTTC...TGCAATGTGGTTTAGTATGGAACTTACTTTGCACTGTATCTGGCGGTTGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR CAA 90 bp AATACGAGACTATTTACAACGAAATCAAACCATTTTAGTGGAATCTaGACTGTGCACGAGCATGTCACTCTGCCCCCAGTAATTAAGCTT +
Preference number: 2 (lower is better)
Translates to: NTRLFTTKSNHFSGI*TVHEHVTLPPVIKL
Trigger: AAGCTTAATTACTGGGGGCAGAGTGACATGCTCGTGCACAGTCAAGATTCCACTAAAATGGTTTGATTTCGTTGTAAATAGTCTCGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR TCA 90 bp ATGGGTTTATTGGAATGTAACCCCACTGTAACTCAAGGAATACCTATAATGTCTGTGGAAGGACAGAAATaGAGTCCCCAAACAATAATG +
Preference number: 2 (lower is better)
Translates to: MGLLECNPTVTQGIPIMSVEGQK*SPQTIM
Trigger: CATTATTGTTTGGGGACTTCATTTCTGTCCTTCCAC...AGACATTATAGGTATTCCTTGAGTTACAGTGGGGTTACATTCCAATAAACCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
3UTR-3UTR CCA 90 bp CCACAGTACAATAAAAGCAAAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCCATAAAGGCATAGACTaGCATCTCTACAATGACTTG +
Preference number: 2 (lower is better)
Translates to: PQYNKSKIQPPDTVQSKFHKGID*HLYNDL
Trigger: CAAGTCATTGTAGAGATGCCAGTCTATGCCTTTATG...GAACTTACTTTGCACTGTATCTGGCGGTTGAATTTTGCTTTTATTGTACTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR CCA 90 bp ATGGGTTTATTGGAATGTAACCCCACTGTAACTCAAGGAATACCTATAATGTCTTGCATAAACCACGAGTaGAAGGACAGAAATGAAGTC +
Preference number: 2 (lower is better)
Translates to: MGLLECNPTVTQGIPIMSCINHE*KDRNEV
Trigger: GACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCA...AGACATTATAGGTATTCCTTGAGTTACAGTGGGGTTACATTCCAATAAACCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
3UTR-3UTR TCA 90 bp CCACAGTACAATAAAAGCAAAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCACAAAGGTGGTTATGTaGATATACCAAGAACTAGTG +
Preference number: 2 (lower is better)
Translates to: PQYNKSKIQPPDTVQSKFTKVVM*IYQELV
Trigger: CACTAGTTCTTGGTATATTCACATAACCACCTTTGT...GAACTTACTTTGCACTGTATCTGGCGGTTGAATTTTGCTTTTATTGTACTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR CCA 90 bp CCACAGTACAATAAAAGCAAAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCCTGCATTCACAAAGGTaGTTATGTGAATATACCAAG +
Preference number: 2 (lower is better)
Translates to: PQYNKSKIQPPDTVQSKFLHSQR*LCEYTK
Trigger: CTTGGTATATTCACATAACCACCTTTGTGAATGCAG...GAACTTACTTTGCACTGTATCTGGCGGTTGAATTTTGCTTTTATTGTACTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR GCA 72 bp GGGCTTGGGGCCGACAGAGGTTACCGAGCCACCCACTaGAAAGGCGAGTTTGTGGGGCCTGCTGAAGAGAAG +
Preference number: 3 (lower is better)
Translates to: GLGADRGYRATH*KGEFVGPAEEK
Trigger: CTTCTCTTCAGCAGGCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR CCA 72 bp ATCTGGAGAGAGGGAGTGCGTACGGAGCTCTGGGCTTaGGGCCGACAGAGGTTACCGAGCCACCCACTGCAA +
Preference number: 3 (lower is better)
Translates to: IWREGVRTELWA*GRQRLPSHPLQ
Trigger: TTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCGTACGCACTCCCTCTCTCCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR CCA 72 bp AGGAAAATCTGGAGAGAGGGAGTGCGTACGGAGCTCTaGGCTTGGGGCCGACAGAGGTTACCGAGCCACCCA +
Preference number: 3 (lower is better)
Translates to: RKIWREGVRTEL*AWGRQRLPSHP
Trigger: TGGGTGGCTCGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCGTACGCACTCCCTCTCTCCAGATTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR CAA 90 bp ACACAGGTAGCAGTGCAGCTGCGACATTACCAGGTAATTAAGCCTCCCCGAGGGACTGCAAAGGCGAGTTaGTGGGGCCTGCTGAAGAGA +
Preference number: 3 (lower is better)
Translates to: TQVAVQLRHYQVIKPPRGTAKAS*WGLLKR
Trigger: TCTCTTCAGCAGGCCCCACAAACTCGCCTTTGCAGT...CCCTCGGGGAGGCTTAATTACCTGGTAATGTCGCAGCTGCACTGCTACCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR CAA 90 bp AGTGGAATCTTGACTGTGCACGAGCATGTCACTCTGCCCCCAGTAATTAAGCTTACTGCAAAGGCGAGTTaGTGGGGCCTGCTGAAGAGA +
Preference number: 3 (lower is better)
Translates to: SGILTVHEHVTLPPVIKLTAKAS*WGLLKR
Trigger: TCTCTTCAGCAGGCCCCACAAACTCGCCTTTGCAGT...AAGCTTAATTACTGGGGGCAGAGTGACATGCTCGTGCACAGTCAAGATTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR GCA 72 bp GACAGAGGCGGCCATGGAAACGTGTTCCAGAGTAGTTaGATAAACCACGAGTGGAAGGACAGAAATGAAGTC +
Preference number: 3 (lower is better)
Translates to: DRGGHGNVFQSS*INHEWKDRNEV
Trigger: GACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAACACGTTTCCATGGCCGCCTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
3UTR-3UTR CAA 90 bp CAGTGCAAAGTAAGTTCCATACTAAACCACATTGCAAGGTTACATCTTTTTCAGTACGGAGCTCTGGGCTaGGGGCCGACAGAGGTTACC +
Preference number: 3 (lower is better)
Translates to: QCKVSSILNHIARLHLFQYGALG*GPTEVT
Trigger: GGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCGTA...CTGAAAAAGATGTAACCTTGCAATGTGGTTTAGTATGGAACTTACTTTGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR CAA 90 bp CAGTGCAAAGTAAGTTCCATACTAAACCACATTGCAAGGTTACATCTTTTTCAGTCTGAGATGTGTGCTTaGACAAAAGCAGCGTCTCCT +
Preference number: 3 (lower is better)
Translates to: QCKVSSILNHIARLHLFQSEMCA*TKAASP
Trigger: AGGAGACGCTGCTTTTGTCAAAGCACACATCTCAGA...CTGAAAAAGATGTAACCTTGCAATGTGGTTTAGTATGGAACTTACTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR-3UTR CAA 90 bp GTGCAAAGTAAGTTCCATACTAAACCACATTGCAAGGTTACATCTTTTTCAGTGTCTGAGATGTGTGCTTaGACAAAAGCAGCGTCTCCT +
Preference number: 3 (lower is better)
Translates to: VQSKFHTKPHCKVTSFSVSEMCA*TKAASP
Trigger: AGGAGACGCTGCTTTTGTCAAAGCACACATCTCAGA...CACTGAAAAAGATGTAACCTTGCAATGTGGTTTAGTATGGAACTTACTTTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR TCA 72 bp TCAACTGCCTTTGATAGCAAAAGAATACTGATGAGATaGAGAGACTTAGGTGCACCTTATCGAAATAAGCAA +
Preference number: 3 (lower is better)
Translates to: STAFDSKRILMR*RDLGAPYRNKQ
Trigger: TTGCTTATTTCGATAAGGTGCACCTAAGTCTCTTCATCTCATCAGTATTCTTTTGCTATCAAAGGCAGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR CCA 72 bp AAAGATATTCGGAAAAGGTTAATTTCATTTCTTAAGTaGCAAGCAACTGCACTCATTTCCTGTTCAGATTCA +
Preference number: 3 (lower is better)
Translates to: KDIRKRLISFLK*QATALISCSDS
Trigger: TGAATCTGAACAGGAAATGAGTGCAGTTGCTTGCCACTTAAGAAATGAAATTAACCTTTTCCGAATATCTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp TTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTGGGGCCGCCGCTGCTGTTTCTaGCGCCGCCGCTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LGPTEVTEPPTAKASLWGRRCCF*RRRCRL
Trigger: GAGGCGGCAGCGGCGGCGGCAGAAACAGCAGCGGCG...GCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp TTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTGGGGCCTCCCTGTTACTGGCTaGCGAGGCCCGCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LGPTEVTEPPTAKASLWGLPVTG*RGPRQG
Trigger: GCCCTGACGCGGGCCTCGTCAGCCAGTAACAGGGAG...GCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp TTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTGGGGCCCTCCTCCCAGCTCCTaGCCTTCTCGGAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGPTEVTEPPTAKASLWGPPPSS*PSRRRL
Trigger: CAGCCTCCTCCGAGAAGGGCAGGAGCTGGGAGGAGG...GCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp ACACAGGTAGCAGTGCAGCTGCGACATTACCAGGTAATTAAGCCTCCCCGAGGGCGCCGCTGCTGTTTCTaGCGCCGCCGCTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: TQVAVQLRHYQVIKPPRGRRCCF*RRRCRL
Trigger: GAGGCGGCAGCGGCGGCGGCAGAAACAGCAGCGGCG...CCCTCGGGGAGGCTTAATTACCTGGTAATGTCGCAGCTGCACTGCTACCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp CGGAGCTCTGGGCTTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGCTAACTCCCACCTCTaGTCCCTGTTACTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RSSGLGADRGYRATHCKGANSHL*SLLLAD
Trigger: GTCAGCCAGTAACAGGGAGCAGAGGTGGGAGTTAGC...GCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp TGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTGGGGCCTACCGAGCCACCCACTaGAAAGGCGAGTTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: WGRQRLPSHPLQRRVCGAYRATH*KGEFVG
Trigger: CCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTA...GGCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CCA 90 bp TTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTGGGGCTCTGCTCCCTGTTACTaGCTGACGAGGCCCGCGTCA +
Preference number: 4 (lower is better)
Translates to: LGPTEVTEPPTAKASLWGSAPCY*LTRPAS
Trigger: TGACGCGGGCCTCGTCAGCCAGTAACAGGGAGCAGA...GCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
3UTR CAA 72 bp AATCTGGAGAGAGGGAGTGCGTACGGAGCTCTGGGCTaGGGGCCGACAGAGGTTACCGAGCCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: NLERGSAYGALG*GPTEVTEPPTA
Trigger: TGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCGTACGCACTCCCTCTCTCCAGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp GCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGAACTAATGCGCCGCTGCTGTTTCTaGCGCCGCCGCTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: AGLRSHATKDTSLKKELMRRCCF*RRRCRL
Trigger: GAGGCGGCAGCGGCGGCGGCAGAAACAGCAGCGGCG...CATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp TGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTGGGGCCGCAAAGGCGAGTTTGTaGGGCCTGCTGAAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: WGRQRLPSHPLQRRVCGAAKASL*GLLKRR
Trigger: CCTTCTCTTCAGCAGGCCCCACAAACTCGCCTTTGC...GGCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CCA 90 bp AGCCTCCCCGAGGGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGAACGGAGCTCTGGGCTTaGGGCCGACAGAGGTTACCG +
Preference number: 4 (lower is better)
Translates to: SLPEGRWFLYGVGPKRPRTELWA*GRQRLP
Trigger: CGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCGT...TCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACCCTCGGGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CCA 90 bp TTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTGGGGCCTCCCCGAGGGTAGGTaGTTTCTGTATGGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LGPTEVTEPPTAKASLWGLPEGR*FLYGVG
Trigger: GCCTACCCCATACAGAAACCACCTACCCTCGGGGAG...GCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp ACACAGGTAGCAGTGCAGCTGCGACATTACCAGGTAATTAAGCCTCCCCGAGGGCCCGTCCCTGCACACTaGCACGAGTCGCGCCATCGT +
Preference number: 4 (lower is better)
Translates to: TQVAVQLRHYQVIKPPRGPVPAH*HESRHR
Trigger: ACGATGGCGCGACTCGTGGCAGTGTGCAGGGACGGG...CCCTCGGGGAGGCTTAATTACCTGGTAATGTCGCAGCTGCACTGCTACCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp AGCCTCCCCGAGGGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGATCTGGAGAGAGGGAGTaGGTACGGAGCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLPEGRWFLYGVGPKRPRSGERE*VRSSGL
Trigger: AAGCCCAGAGCTCCGTACGCACTCCCTCTCTCCAGA...TCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACCCTCGGGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CCA 90 bp GGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGATCCTTCAACCCCACGGAGCTCTGGGCTTaGGGCCGACAGAGGTTACCG +
Preference number: 4 (lower is better)
Translates to: GRWFLYGVGPKRPRSFNPTELWA*GRQRLP
Trigger: CGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCGT...GGGGTTGAAGGATCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp CGGAGCTCTGGGCTTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAAGAAAGCCCGTTTTaGAGAAAGGGCCTAGCAATA +
Preference number: 4 (lower is better)
Translates to: RSSGLGADRGYRATHCKGEESPF*RKGLAI
Trigger: TATTGCTAGGCCCTTTCTTCAAAACGGGCTTTCTTC...GCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp AGCCTCCCCGAGGGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGAGCTAACTCCCACCTCTaGTCCCTGTTACTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SLPEGRWFLYGVGPKRPRANSHL*SLLLAD
Trigger: GTCAGCCAGTAACAGGGAGCAGAGGTGGGAGTTAGC...TCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACCCTCGGGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAACCTCCTCCCCGTCCCTaGACACTGCCACGAGTCGCG +
Preference number: 4 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKPPPRP*TLPRVA
Trigger: CGCGACTCGTGGCAGTGTGCAGGGACGGGGAGGAGG...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp TTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTGGGGCCCTTCAACCCCTCTCTaGGATGTGTGCTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: LGPTEVTEPPTAKASLWGPSTPL*DVCFDK
Trigger: TTTGTCAAAGCACACATCTCAGAGAGGGGTTGAAGG...GCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp AGCCTCCCCGAGGGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGAGCCTCGCCTAGGAGTTaGAACACACTCTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLPEGRWFLYGVGPKRPRASPRS*NTLFLQ
Trigger: CTGGAGAAAGAGTGTGTTGCAACTCCTAGGCGAGGC...TCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACCCTCGGGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCCTCCCTGTTACTGGCTaGCGAGGCCCGCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPLPVTG*RGPRQG
Trigger: GCCCTGACGCGGGCCTCGTCAGCCAGTAACAGGGAG...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp AGTGGAATCTTGACTGTGCACGAGCATGTCACTCTGCCCCCAGTAATTAAGCTTCCCGTCCCTGCACACTaGCACGAGTCGCGCCATCGT +
Preference number: 4 (lower is better)
Translates to: SGILTVHEHVTLPPVIKLPVPAH*HESRHR
Trigger: ACGATGGCGCGACTCGTGGCAGTGTGCAGGGACGGG...AAGCTTAATTACTGGGGGCAGAGTGACATGCTCGTGCACAGTCAAGATTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CCA 90 bp GCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGAACTAATGTCTGCTCCCTGTTACTaGCTGACGAGGCCCGCGTCA +
Preference number: 4 (lower is better)
Translates to: AGLRSHATKDTSLKKELMSAPCY*LTRPAS
Trigger: TGACGCGGGCCTCGTCAGCCAGTAACAGGGAGCAGA...CATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGACCTCCTCCCCGTCCCTaGACACTGCCACGAGTCGCG +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRPPPRP*TLPRVA
Trigger: CGCGACTCGTGGCAGTGTGCAGGGACGGGGAGGAGG...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACACAGGTAGCAGTGCAGCTGCGACATTACCAGGTAATTAAGCCTCCCCGAGGGGCCTCGCCTAGGAGTTaGAACACACTCTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TQVAVQLRHYQVIKPPRGASPRS*NTLFLQ
Trigger: CTGGAGAAAGAGTGTGTTGCAACTCCTAGGCGAGGC...CCCTCGGGGAGGCTTAATTACCTGGTAATGTCGCAGCTGCACTGCTACCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CCA 90 bp CGGAGCTCTGGGCTTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCCTGCATTCACAAAGGTaGTTATGTGAATATACCAAG +
Preference number: 4 (lower is better)
Translates to: RSSGLGADRGYRATHCKGLHSQR*LCEYTK
Trigger: CTTGGTATATTCACATAACCACCTTTGTGAATGCAG...GCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp TGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTGGGGCCACAAAGGTGGTTATGTaGATATACCAAGAACTAGTG +
Preference number: 4 (lower is better)
Translates to: WGRQRLPSHPLQRRVCGATKVVM*IYQELV
Trigger: CACTAGTTCTTGGTATATTCACATAACCACCTTTGT...GGCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp AAGTCCACCTGTAAACTAAATAATGCGAAGAAAGCCCGTTTTGAAGAAAGGGCCCCTCCTCCCCGTCCCTaGACACTGCCACGAGTCGCG +
Preference number: 4 (lower is better)
Translates to: KSTCKLNNAKKARFEERAPPPRP*TLPRVA
Trigger: CGCGACTCGTGGCAGTGTGCAGGGACGGGGAGGAGG...GGCCCTTTCTTCAAAACGGGCTTTCTTCGCATTATTTAGTTTACAGGTGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CCA 90 bp AGTGGAATCTTGACTGTGCACGAGCATGTCACTCTGCCCCCAGTAATTAAGCTTTCTGCTCCCTGTTACTaGCTGACGAGGCCCGCGTCA +
Preference number: 4 (lower is better)
Translates to: SGILTVHEHVTLPPVIKLSAPCY*LTRPAS
Trigger: TGACGCGGGCCTCGTCAGCCAGTAACAGGGAGCAGA...AAGCTTAATTACTGGGGGCAGAGTGACATGCTCGTGCACAGTCAAGATTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp GGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGATCCTTCAACCCCCTGAGATGTGTGCTTTaGCAAAAGCAGCGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: GRWFLYGVGPKRPRSFNPLRCVL*QKQRLL
Trigger: TAGGAGACGCTGCTTTTGTCAAAGCACACATCTCAG...GGGGTTGAAGGATCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp GGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGATCCTTCAACCCCCCTTCAACCCCTCTCTaGGATGTGTGCTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: GRWFLYGVGPKRPRSFNPPSTPL*DVCFDK
Trigger: TTTGTCAAAGCACACATCTCAGAGAGGGGTTGAAGG...GGGGTTGAAGGATCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACCGCCGCTGCTGTTTCTaGCGCCGCCGCTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYRRCCF*RRRCRL
Trigger: GAGGCGGCAGCGGCGGCGGCAGAAACAGCAGCGGCG...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp GCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGAACTAATGATCATATGGCAGGCCTaGGCAGCCACGCAACTAAAG +
Preference number: 4 (lower is better)
Translates to: AGLRSHATKDTSLKKELMIIWQA*AATQLK
Trigger: CTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGAT...CATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCTCTGCTCCCTGTTACTaGCTGACGAGGCCCGCGTCA +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPSAPCY*LTRPAS
Trigger: TGACGCGGGCCTCGTCAGCCAGTAACAGGGAGCAGA...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAACTCAGGACTTCGCGTaGTGTCACCACCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKTQDFA*CHHHGN
Trigger: ATTGCCATGGTGGTGACATCACGCGAAGTCCTGAGT...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp GCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGAACTAATGGTGCATGGTATTTCCTaGGGTCTCTCGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: AGLRSHATKDTSLKKELMVHGIS*GLSITW
Trigger: CCAGGTAATCGAGAGACCTCAGGAAATACCATGCAC...CATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATCCCGTCCCTGCACACTaGCACGAGTCGCGCCATCGT +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDPVPAH*HESRHR
Trigger: ACGATGGCGCGACTCGTGGCAGTGTGCAGGGACGGG...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp AAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCCATACTAAACCACATTGCACCTCCTCCCCGTCCCTaGACACTGCCACGAGTCGCG +
Preference number: 4 (lower is better)
Translates to: KFNRQIQCKVSSILNHIAPPPRP*TLPRVA
Trigger: CGCGACTCGTGGCAGTGTGCAGGGACGGGGAGGAGG...TGCAATGTGGTTTAGTATGGAACTTACTTTGCACTGTATCTGGCGGTTGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAAACCAAGGCAATGGCTaGCCACCCTTTTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKNQGNG*PPFSEL
Trigger: CAGCTCTGAAAAGGGTGGGCAGCCATTGCCTTGGTT...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCCCCTCCTGCGAACTCTaGCTCAGCACGACCCAAAAG +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPPSCEL*LSTTQK
Trigger: CTTTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGG...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACCTCCCTGTTACTGGCTaGCGAGGCCCGCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYLPVTG*RGPRQG
Trigger: GCCCTGACGCGGGCCTCGTCAGCCAGTAACAGGGAG...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp GGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGATCCTTCAACCCCAGAATACTGATGAGATaGAGAGACTTAGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: GRWFLYGVGPKRPRSFNPRILMR*RDLGAP
Trigger: AGGTGCACCTAAGTCTCTTCATCTCATCAGTATTCT...GGGGTTGAAGGATCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp GGAATACCTATAATGTCTTCTACTGAGACAGAGGCGGCCATGGAAACGTGTTCCAACCAAGGCAATGGCTaGCCACCCTTTTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GIPIMSSTETEAAMETCSNQGNG*PPFSEL
Trigger: CAGCTCTGAAAAGGGTGGGCAGCCATTGCCTTGGTT...GGAACACGTTTCCATGGCCGCCTCTGTCTCAGTAGAAGACATTATAGGTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR CCA 90 bp CCACAGTACAATAAAAGCAAAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCGTGCGTACGGAGCTCTaGGCTTGGGGCCGACAGAGG +
Preference number: 4 (lower is better)
Translates to: PQYNKSKIQPPDTVQSKFVRTEL*AWGRQR
Trigger: CCTCTGTCGGCCCCAAGCCCAGAGCTCCGTACGCAC...GAACTTACTTTGCACTGTATCTGGCGGTTGAATTTTGCTTTTATTGTACTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp GCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGCATACCATGTCGCTaGATGAACTGCTTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: AGLRSHATKDTSLKKELMSIPCR*MNCFSC
Trigger: ACAGCTAAAGCAGTTCATTCAGCGACATGGTATGCT...CATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACCCCGTCCCTGCACACTaGCACGAGTCGCGCCATCGT +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYPVPAH*HESRHR
Trigger: ACGATGGCGCGACTCGTGGCAGTGTGCAGGGACGGG...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp AGCCTCCCCGAGGGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGAATTTCATTTCTTAAGTaGCAAGCAACTGCACTCATT +
Preference number: 4 (lower is better)
Translates to: SLPEGRWFLYGVGPKRPRISFLK*QATALI
Trigger: AATGAGTGCAGTTGCTTGCCACTTAAGAAATGAAAT...TCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACCCTCGGGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CCA 90 bp GGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGATCCTTCAACCCCCATAAAGGCATAGACTaGCATCTCTACAATGACTTG +
Preference number: 4 (lower is better)
Translates to: GRWFLYGVGPKRPRSFNPHKGID*HLYNDL
Trigger: CAAGTCATTGTAGAGATGCCAGTCTATGCCTTTATG...GGGGTTGAAGGATCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGACAGACAGGACTCCCTTaGGCCCTACTGTTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRQTGLP*ALLLGV
Trigger: AACCCCTAACAGTAGGGCCCAAGGGAGTCCTGTCTG...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp GCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGAACTAATGGGTCTCTCGATTACCTaGATCTGTAATACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: AGLRSHATKDTSLKKELMGLSIT*ICNTAS
Trigger: GGAAGCTGTATTACAGATCCAGGTAATCGAGAGACC...CATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAACTCAGGACTTCGCGTaGTGTCACCACCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRTQDFA*CHHHGN
Trigger: ATTGCCATGGTGGTGACATCACGCGAAGTCCTGAGT...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCTCTGCCCGTAGCTTCTaGCAGATTCGATGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPSARSF*QIRCSL
Trigger: AAGACTGCATCGAATCTGGCAGAAGCTACGGGCAGA...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp ACACAGGTAGCAGTGCAGCTGCGACATTACCAGGTAATTAAGCCTCCCCGAGGGCTGCATTCACAAAGGTaGTTATGTGAATATACCAAG +
Preference number: 4 (lower is better)
Translates to: TQVAVQLRHYQVIKPPRGLHSQR*LCEYTK
Trigger: CTTGGTATATTCACATAACCACCTTTGTGAATGCAG...CCCTCGGGGAGGCTTAATTACCTGGTAATGTCGCAGCTGCACTGCTACCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CCA 90 bp GCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGAACTAATGGTGATGTCACCACCATaGCAATACTTAGATCCTGTT +
Preference number: 4 (lower is better)
Translates to: AGLRSHATKDTSLKKELMVMSPP*QYLDPV
Trigger: AACAGGATCTAAGTATTGCCATGGTGGTGACATCAC...CATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCTACCATGTCGCTGAATaGACTGCTTTAGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPYHVAE*TALAVH
Trigger: GTGCACAGCTAAAGCAGTTCATTCAGCGACATGGTA...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp AACGTGTTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCGTGCATGGTATTTCCTaGGGTCTCTCGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: NVFQSSCINHEWKDRNEVVHGIS*GLSITW
Trigger: CCAGGTAATCGAGAGACCTCAGGAAATACCATGCAC...GACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAACACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR TCA 90 bp TTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCCCCAAAGTGCATGGTATTTCCTaGGGTCTCTCGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: FQSSCINHEWKDRNEVPKVHGIS*GLSITW
Trigger: CCAGGTAATCGAGAGACCTCAGGAAATACCATGCAC...TTTGGGGACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR GCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATGCTAACTCCCACCTCTaGTCCCTGTTACTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDANSHL*SLLLAD
Trigger: GTCAGCCAGTAACAGGGAGCAGAGGTGGGAGTTAGC...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp CCACAGTACAATAAAAGCAAAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCTCTGGAGAGAGGGAGTaGGTACGGAGCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PQYNKSKIQPPDTVQSKFSGERE*VRSSGL
Trigger: AAGCCCAGAGCTCCGTACGCACTCCCTCTCTCCAGA...GAACTTACTTTGCACTGTATCTGGCGGTTGAATTTTGCTTTTATTGTACTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp GGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGATCCTTCAACCCCAGCTTAAGTTTTATTTaGCTTAGTCACAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: GRWFLYGVGPKRPRSFNPSLSFI*LSHKST
Trigger: TGTGGACTTGTGACTAAGGCAAATAAAACTTAAGCT...GGGGTTGAAGGATCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCTACAAATGCCTTCAGTaGAGGCAACATCCGAACCCT +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPYKCLQ*RQHPNP
Trigger: AGGGTTCGGATGTTGCCTGCACTGAAGGCATTTGTA...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp GCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGAACTAATGATACTTAGATCCTGTTaGTTAAGCATACCATGTCGC +
Preference number: 4 (lower is better)
Translates to: AGLRSHATKDTSLKKELMILRSC*LSIPCR
Trigger: GCGACATGGTATGCTTAAGCAACAGGATCTAAGTAT...CATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCTATTACCATCTTCAGTaGTGCCACAGGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPYYHLQ*CHRLCS
Trigger: GCTGCAAAGCCTGTGGCAGCACTGAAGATGGTAATA...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp GGTAGGTGGTTTCTGTATGGGGTAGGCCCTAAACGCCCAAGATCCTTCAACCCCATTTCATTTCTTAAGTaGCAAGCAACTGCACTCATT +
Preference number: 4 (lower is better)
Translates to: GRWFLYGVGPKRPRSFNPISFLK*QATALI
Trigger: AATGAGTGCAGTTGCTTGCCACTTAAGAAATGAAAT...GGGGTTGAAGGATCTTGGGCGTTTAGGGCCTACCCCATACAGAAACCACCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGACCAGACTCTACAAGCTaGGAAAAGAGACGCTCCACA +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRPDSTS*EKRRST
Trigger: TGTGGAGCGTCTCTTTTCCCAGCTTGTAGAGTCTGG...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATCAGACAGGACTCCCTTaGGCCCTACTGTTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDQTGLP*ALLLGV
Trigger: AACCCCTAACAGTAGGGCCCAAGGGAGTCCTGTCTG...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGATATGTGTCGTTCATGTaGACAGCACCGCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRYVSFM*TAPQAF
Trigger: GAAGGCTTGCGGTGCTGTCCACATGAACGACACATA...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp GCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGAACTAATGCAGCTTCCAAGCTTCTaGATATGTTCATCACATTTC +
Preference number: 4 (lower is better)
Translates to: AGLRSHATKDTSLKKELMQLPSF*ICSSHF
Trigger: GAAATGTGATGAACATATCCAGAAGCTTGGAAGCTG...CATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp GGAATACCTATAATGTCTTCTACTGAGACAGAGGCGGCCATGGAAACGTGTTCCGAAACACTGTGTGCATaGTATTTCCTGAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GIPIMSSTETEAAMETCSETLCA*YFLRSL
Trigger: GAGAGACCTCAGGAAATACCATGCACACAGTGTTTC...GGAACACGTTTCCATGGCCGCCTCTGTCTCAGTAGAAGACATTATAGGTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR CCA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAACCAGCCACTACAAATaGGCCTCTTGTGATCATTTA +
Preference number: 4 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKTSHYK*ASCDHL
Trigger: TAAATGATCACAAGAGGCCCATTTGTAGTGGCTGGT...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAATGTGCACCATTATTCTaGTGTCCATCGAGATTTAAC +
Preference number: 4 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKCAPLF*CPSRFN
Trigger: GTTAAATCTCGATGGACATCAGAATAATGGTGCACA...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAATACTCGTTCCTCTTCTaGAAATTCCTCACAAAGTTG +
Preference number: 4 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKYSFLF*KFLTKL
Trigger: CAACTTTGTGAGGAATTTTCAGAAGAGGAACGAGTA...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGCTAGGACAGGTACATaGTGTATTTTCATTGGTAAC +
Preference number: 4 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKARTGT*CIFIGN
Trigger: GTTACCAATGAAAATACATCATGTACCTGTCCTAGC...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp TTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCCCCAAATATAATGTCTTCTACTaGGACAGAGGCGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: FQSSCINHEWKDRNEVPKYNVFY*DRGGHG
Trigger: TCCATGGCCGCCTCTGTCTCAGTAGAAGACATTATA...TTTGGGGACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR GCA 90 bp GTGCAAAGTAAGTTCCATACTAAACCACATTGCAAGGTTACATCTTTTTCAGTGTACCGAGCCACCCACTaGAAAGGCGAGTTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VQSKFHTKPHCKVTSFSVYRATH*KGEFVG
Trigger: CCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTA...CACTGAAAAAGATGTAACCTTGCAATGTGGTTTAGTATGGAACTTACTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCTCATCCCTGCATTCCTaGGACATTAGTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPSSLHS*DISSHT
Trigger: TGTATGGGAACTAATGTCGCAGGAATGCAGGGATGA...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAAAACTACTTCATCCCTaGATTCCTGCGACATTAGTT +
Preference number: 4 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKKLLHP*IPATLV
Trigger: AACTAATGTCGCAGGAATGCAGGGATGAAGTAGTTT...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTCTCTTCGCCCTCCTaGGAACTCTGGCTCAGCACG +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYFSSPS*ELWLST
Trigger: CGTGCTGAGCCAGAGTTCGCAGGAGGGCGAAGAGAA...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGACACCCTTTTCAGAGCTaGAACAGCTTTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRHPFQS*NSFQDV
Trigger: CACATCCTGAAAGCTGTTGCAGCTCTGAAAAGGGTG...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp GCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGAACTAATGCGTTTCTGTAGGTTCTaGAAACTGTGGTACATTTTT +
Preference number: 4 (lower is better)
Translates to: AGLRSHATKDTSLKKELMRFCRF*KLWYIF
Trigger: AAAAATGTACCACAGTTTGCAGAACCTACAGAAACG...CATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATATCATATGGCAGGCCTaGGCAGCCACGCAACTAAAG +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDIIWQA*AATQLK
Trigger: CTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGAT...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAACGACAACCAACACATaGGACAAGCTGAGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRTTTNT*DKLRKC
Trigger: GCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGT...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAACAGCTTCCAAGCTTCTaGATATGTTCATCACATTTC +
Preference number: 4 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKQLPSF*ICSSHF
Trigger: GAAATGTGATGAACATATCCAGAAGCTTGGAAGCTG...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAAAAGATTTCCTCATCTaGAGTACATTCAGACTCATC +
Preference number: 4 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKKDFLI*STFRLI
Trigger: GATGAGTCTGAATGTACTTCAGATGAGGAAATCTTT...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATTCTGCCCGTAGCTTCTaGCAGATTCGATGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDSARSF*QIRCSL
Trigger: AAGACTGCATCGAATCTGGCAGAAGCTACGGGCAGA...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTAAGAGTTTTTCGAAAGAGAAGGCGCAGTAGTCATCGTGAGTGTTTCATTGAAAACCAAGGCAATGGCTaGCCACCCTTTTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRVFRKRRRSSHRECFIENQGNG*PPFSEL
Trigger: CAGCTCTGAAAAGGGTGGGCAGCCATTGCCTTGGTT...TTCAATGAAACACTCACGATGACTACTGCGCCTTCTCTTTCGAAAAACTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAAATTTCTCCTTCAGATaGTGTCGGTATTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKNFSFR*CRYCSL
Trigger: TAGAGAACAATACCGACAGCATCTGAAGGAGAAATT...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp AGTGGAATCTTGACTGTGCACGAGCATGTCACTCTGCCCCCAGTAATTAAGCTTCATAAAGGCATAGACTaGCATCTCTACAATGACTTG +
Preference number: 4 (lower is better)
Translates to: SGILTVHEHVTLPPVIKLHKGID*HLYNDL
Trigger: CAAGTCATTGTAGAGATGCCAGTCTATGCCTTTATG...AAGCTTAATTACTGGGGGCAGAGTGACATGCTCGTGCACAGTCAAGATTCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTCCCTCCTGCGAACTCTaGCTCAGCACGACCCAAAAG +
Preference number: 4 (lower is better)
Translates to: TLRFNITSKHFASGCLLCPSCEL*LSTTQK
Trigger: CTTTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGG...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp GGAATACCTATAATGTCTTCTACTGAGACAGAGGCGGCCATGGAAACGTGTTCCCAGCTTCCAAGCTTCTaGATATGTTCATCACATTTC +
Preference number: 4 (lower is better)
Translates to: GIPIMSSTETEAAMETCSQLPSF*ICSSHF
Trigger: GAAATGTGATGAACATATCCAGAAGCTTGGAAGCTG...GGAACACGTTTCCATGGCCGCCTCTGTCTCAGTAGAAGACATTATAGGTATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR CCA 90 bp TTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCCCCAAAGGTCTCTCGATTACCTaGATCTGTAATACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FQSSCINHEWKDRNEVPKGLSIT*ICNTAS
Trigger: GGAAGCTGTATTACAGATCCAGGTAATCGAGAGACC...TTTGGGGACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR CCA 90 bp AACGTGTTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCGAAACACTGTGTGCATaGTATTTCCTGAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: NVFQSSCINHEWKDRNEVETLCA*YFLRSL
Trigger: GAGAGACCTCAGGAAATACCATGCACACAGTGTTTC...GACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAACACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR CCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCACCAGCCACTACAAATaGGCCTCTTGTGATCATTTA +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPTSHYK*ASCDHL
Trigger: TAAATGATCACAAGAGGCCCATTTGTAGTGGCTGGT...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCCCAAAAGATGTGCAATaGAGTCTGTTTCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPPKDVQ*SLFHSK
Trigger: TTTGCTGTGAAACAGACTTCATTGCACATCTTTTGG...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp TTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCCCCAAAGTGGAAGGACAGAAATaGAGTCCCCAAACAATAATG +
Preference number: 4 (lower is better)
Translates to: FQSSCINHEWKDRNEVPKVEGQK*SPQTIM
Trigger: CATTATTGTTTGGGGACTTCATTTCTGTCCTTCCAC...TTTGGGGACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR TCA 90 bp AACGTGTTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCGTGGAAGGACAGAAATaGAGTCCCCAAACAATAATG +
Preference number: 4 (lower is better)
Translates to: NVFQSSCINHEWKDRNEVVEGQK*SPQTIM
Trigger: CATTATTGTTTGGGGACTTCATTTCTGTCCTTCCAC...GACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAACACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR TCA 90 bp GGAATACCTATAATGTCTTCTACTGAGACAGAGGCGGCCATGGAAACGTGTTCCGGTTTATTGGGATGTTaGATGTATTTTCAACTCGCA +
Preference number: 4 (lower is better)
Translates to: GIPIMSSTETEAAMETCSGLLGC*MYFQLA
Trigger: TGCGAGTTGAAAATACATTCAACATCCCAATAAACC...GGAACACGTTTCCATGGCCGCCTCTGTCTCAGTAGAAGACATTATAGGTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR GCA 90 bp TTTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTAGCTAACTCCCACCTCTaGTCCCTGTTACTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: FCTLRFNITSKHFASGCLANSHL*SLLLAD
Trigger: GTCAGCCAGTAACAGGGAGCAGAGGTGGGAGTTAGC...TAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAACTACTTCATCCCTaGATTCCTGCGACATTAGTT +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPKLLHP*IPATLV
Trigger: AACTAATGTCGCAGGAATGCAGGGATGAAGTAGTTT...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTACCATCTTCAGTGCTaGCACAGGCTTTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYYHLQC*HRLCSC
Trigger: GCAGCTGCAAAGCCTGTGGCAGCACTGAAGATGGTA...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAGGTACATTTTTCCTATaGTCAAACCAAGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRGTFFL*SNQGNG
Trigger: GCCATTGCCTTGGTTTGAGCATAGGAAAAATGTACC...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCCCCAAAGGTACATTTTTCCTATaGTCAAACCAAGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: FQSSCINHEWKDRNEVPKGTFFL*SNQGNG
Trigger: GCCATTGCCTTGGTTTGAGCATAGGAAAAATGTACC...TTTGGGGACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR GCA 90 bp GGAATACCTATAATGTCTTCTACTGAGACAGAGGCGGCCATGGAAACGTGTTCCCGTTTCTGTAGGTTCTaGAAACTGTGGTACATTTTT +
Preference number: 4 (lower is better)
Translates to: GIPIMSSTETEAAMETCSRFCRF*KLWYIF
Trigger: AAAAATGTACCACAGTTTGCAGAACCTACAGAAACG...GGAACACGTTTCCATGGCCGCCTCTGTCTCAGTAGAAGACATTATAGGTATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR CCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAGGTTCTGCAAACTGTaGTACATTTTTCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPRFCKL*YIFPML
Trigger: GAGCATAGGAAAAATGTACCACAGTTTGCAGAACCT...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp TTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCCCCAAATGCATAAACCACGAGTaGAAGGACAGAAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: FQSSCINHEWKDRNEVPKCINHE*KDRNEV
Trigger: GACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCA...TTTGGGGACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
3UTR CAA 72 bp CTATTTACAACGAAATCAAACCATTTTAGTGGAATCTaGACTGTGCACGAGCATGTCACTCTGCCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: LFTTKSNHFSGI*TVHEHVTLPPV
Trigger: TACTGGGGGCAGAGTGACATGCTCGTGCACAGTCAAGATTCCACTAAAATGGTTTGATTTCGTTGTAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATAGCATACCATGTCGCTaGATGAACTGCTTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDSIPCR*MNCFSC
Trigger: ACAGCTAAAGCAGTTCATTCAGCGACATGGTATGCT...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACACACATGGGACAAGCTaGGAAAGTGCACTCAGGACT +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYTHGTS*ESALRT
Trigger: AGTCCTGAGTGCACTTTCTCAGCTTGTCCCATGTGT...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAGCTAGGACAGGTACATaGTGTATTTTCATTGGTAAC +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRARTGT*CIFIGN
Trigger: GTTACCAATGAAAATACATCATGTACCTGTCCTAGC...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCGTTCTCTTCAGAATTTaGCCAACATTCAACACAACT +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPVLFRI*PTFNTT
Trigger: AGTTGTGTTGAATGTTGGGCAAATTCTGAAGAGAAC...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTAGAGACGCTCCACACTaGGACGACAACCAACACATG +
Preference number: 4 (lower is better)
Translates to: TLRFNITSKHFASGCLLCRDAPH*DDNQHM
Trigger: CATGTGTTGGTTGTCGTCGCAGTGTGGAGCGTCTCT...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCTGTATAAAGCTTCTTTaGATCAGTCATGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPCIKLL*ISHAAS
Trigger: AGAAGCTGCATGACTGATGCAAAGAAGCTTTATACA...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGATATATCTATTGTCTTTaGATGCCTTTCTCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRYIYCL*MPFSSP
Trigger: GGGCGAAGAGAAAGGCATGCAAAGACAATAGATATA...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTTACCATCTTCAGTGCTaGCACAGGCTTTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TLRFNITSKHFASGCLLCYHLQC*HRLCSC
Trigger: GCAGCTGCAAAGCCTGTGGCAGCACTGAAGATGGTA...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTAAGAGTTTTTCGAAAGAGAAGGCGCAGTAGTCATCGTGAGTGTTTCATTGAATATTACCATCTTCAGTaGTGCCACAGGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LRVFRKRRRSSHRECFIEYYHLQ*CHRLCS
Trigger: GCTGCAAAGCCTGTGGCAGCACTGAAGATGGTAATA...TTCAATGAAACACTCACGATGACTACTGCGCCTTCTCTTTCGAAAAACTCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCCGTTTCTGTAGGTTCTaGAAACTGTGGTACATTTTT +
Preference number: 4 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPRFCRF*KLWYIF
Trigger: AAAAATGTACCACAGTTTGCAGAACCTACAGAAACG...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp TTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCCCCAAACAGCTTCCAAGCTTCTaGATATGTTCATCACATTTC +
Preference number: 4 (lower is better)
Translates to: FQSSCINHEWKDRNEVPKQLPSF*ICSSHF
Trigger: GAAATGTGATGAACATATCCAGAAGCTTGGAAGCTG...TTTGGGGACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR CCA 90 bp AACGTGTTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCAGGTTCTGCAAACTGTaGTACATTTTTCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: NVFQSSCINHEWKDRNEVRFCKL*YIFPML
Trigger: GAGCATAGGAAAAATGTACCACAGTTTGCAGAACCT...GACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAACACGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR TCA 90 bp CAGTGCAAAGTAAGTTCCATACTAAACCACATTGCAAGGTTACATCTTTTTCAGCTGAGATGTGTGCTTTaGCAAAAGCAGCGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: QCKVSSILNHIARLHLFQLRCVL*QKQRLL
Trigger: TAGGAGACGCTGCTTTTGTCAAAGCACACATCTCAG...CTGAAAAAGATGTAACCTTGCAATGTGGTTTAGTATGGAACTTACTTTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATTCACCGTGTTCATCATaGTTACAAATGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDSPCSS*LQMPSV
Trigger: CACTGAAGGCATTTGTAATCATGATGAACACGGTGA...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTACCATGTCGCTGAATaGACTGCTTTAGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYYHVAE*TALAVH
Trigger: GTGCACAGCTAAAGCAGTTCATTCAGCGACATGGTA...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTACACATGGGACAAGCTaGGAAAGTGCACTCAGGACT +
Preference number: 4 (lower is better)
Translates to: TLRFNITSKHFASGCLLCTHGTS*ESALRT
Trigger: AGTCCTGAGTGCACTTTCTCAGCTTGTCCCATGTGT...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp TTAAGAGTTTTTCGAAAGAGAAGGCGCAGTAGTCATCGTGAGTGTTTCATTGAACCCTTCCATGCTAGATaGATATCCACAATCACTACC +
Preference number: 4 (lower is better)
Translates to: LRVFRKRRRSSHRECFIEPFHAR*ISTITT
Trigger: GGTAGTGATTGTGGATATTCATCTAGCATGGAAGGG...TTCAATGAAACACTCACGATGACTACTGCGCCTTCTCTTTCGAAAAACTCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTGTGCATGGTATTTCCTaGGGTCTCTCGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: TLRFNITSKHFASGCLLCVHGIS*GLSITW
Trigger: CCAGGTAATCGAGAGACCTCAGGAAATACCATGCAC...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAAGATTTCCTCATCTaGAGTACATTCAGACTCATC +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRKDFLI*STFRLI
Trigger: GATGAGTCTGAATGTACTTCAGATGAGGAAATCTTT...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp ATGGGTTTATTGGAATGTAACCCCACTGTAACTCAAGGAATACCTATAATGTCTTATAATGTCTTCTACTaGGACAGAGGCGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: MGLLECNPTVTQGIPIMSYNVFY*DRGGHG
Trigger: TCCATGGCCGCCTCTGTCTCAGTAGAAGACATTATA...AGACATTATAGGTATTCCTTGAGTTACAGTGGGGTTACATTCCAATAAACCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR TCA 90 bp AACGTGTTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCGGTTTATTGGGATGTTaGATGTATTTTCAACTCGCA +
Preference number: 4 (lower is better)
Translates to: NVFQSSCINHEWKDRNEVGLLGC*MYFQLA
Trigger: TGCGAGTTGAAAATACATTCAACATCCCAATAAACC...GACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAACACGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR GCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTACAAATGCCTTCAGTaGAGGCAACATCCGAACCCT +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYYKCLQ*RQHPNP
Trigger: AGGGTTCGGATGTTGCCTGCACTGAAGGCATTTGTA...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATAAAGGTTTTGGCTTGTaGGTATCTAAGGAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDKGFGL*VSKECN
Trigger: GTTGCACTCCTTAGATACGCACAAGCCAAAACCTTT...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATAGTAGCCCTTTTCTTTaGTGCAGTCAAGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDSSPFL*CSQVHQ
Trigger: TTGGTGAACTTGACTGCAGCAAAGAAAAGGGCTACT...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTAAGAGTTTTTCGAAAGAGAAGGCGCAGTAGTCATCGTGAGTGTTTCATTGAATCTATTGTCTTTGCATaGCTTTCTCTTCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LRVFRKRRRSSHRECFIESIVFA*LSLRPP
Trigger: AGGAGGGCGAAGAGAAAGGCATGCAAAGACAATAGA...TTCAATGAAACACTCACGATGACTACTGCGCCTTCTCTTTCGAAAAACTCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGATCATCTCAAAACTCTTaGGTAAAGCATCAACACCAA +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRSSQNS*VKHQHQ
Trigger: TTGGTGTTGATGCTTTACGCAAGAGTTTTGAGATGA...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ATGGGTTTATTGGAATGTAACCCCACTGTAACTCAAGGAATACCTATAATGTCTCACCCTTTTCAGAGCTaGAACAGCTTTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: MGLLECNPTVTQGIPIMSHPFQS*NSFQDV
Trigger: CACATCCTGAAAGCTGTTGCAGCTCTGAAAAGGGTG...AGACATTATAGGTATTCCTTGAGTTACAGTGGGGTTACATTCCAATAAACCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR GCA 90 bp AACGTGTTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCCGTTTCTGTAGGTTCTaGAAACTGTGGTACATTTTT +
Preference number: 4 (lower is better)
Translates to: NVFQSSCINHEWKDRNEVRFCRF*KLWYIF
Trigger: AAAAATGTACCACAGTTTGCAGAACCTACAGAAACG...GACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAACACGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR CCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATGTGATGTCACCACCATaGCAATACTTAGATCCTGTT +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDVMSPP*QYLDPV
Trigger: AACAGGATCTAAGTATTGCCATGGTGGTGACATCAC...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp TTTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACCAGACTCTACAAGCTaGGAAAAGAGACGCTCCACA +
Preference number: 4 (lower is better)
Translates to: FCTLRFNITSKHFASGCLPDSTS*EKRRST
Trigger: TGTGGAGCGTCTCTTTTCCCAGCTTGTAGAGTCTGG...TAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTTATGTGTCGTTCATGTaGACAGCACCGCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TLRFNITSKHFASGCLLCYVSFM*TAPQAF
Trigger: GAAGGCTTGCGGTGCTGTCCACATGAACGACACATA...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp AACGTGTTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCTACAGTAAGACCACATaGAATACTTACAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: NVFQSSCINHEWKDRNEVYSKTT*NTYKEF
Trigger: GAACTCCTTGTAAGTATTCCATGTGGTCTTACTGTA...GACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAACACGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR CCA 90 bp TTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCCCCAAATACAGTAAGACCACATaGAATACTTACAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: FQSSCINHEWKDRNEVPKYSKTT*NTYKEF
Trigger: GAACTCCTTGTAAGTATTCCATGTGGTCTTACTGTA...TTTGGGGACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR TCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATTACTCGTTCCTCTTCTaGAAATTCCTCACAAAGTTG +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDYSFLF*KFLTKL
Trigger: CAACTTTGTGAGGAATTTTCAGAAGAGGAACGAGTA...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACCAAATGGGCCTCTTGTaGTCATTTAACCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYQMGLL*SFNRQY
Trigger: ATACTGCCGGTTAAATGATCACAAGAGGCCCATTTG...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTCATCCCTGCATTCCTaGGACATTAGTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYSSLHS*DISSHT
Trigger: TGTATGGGAACTAATGTCGCAGGAATGCAGGGATGA...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTCACCCTTTTCAGAGCTaGAACAGCTTTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: TLRFNITSKHFASGCLLCHPFQS*NSFQDV
Trigger: CACATCCTGAAAGCTGTTGCAGCTCTGAAAAGGGTG...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGATACATCCAAACATTTTaGAAGTGGATGTCTACTTTG +
Preference number: 4 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRYIQTF*KWMSTL
Trigger: CAAAGTAGACATCCACTTGCAAAATGTTTGGATGTA...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTACGACAACCAACACATaGGACAAGCTGAGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: TLRFNITSKHFASGCLLCTTTNT*DKLRKC
Trigger: GCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGT...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACGGTCTCTCGATTACCTaGATCTGTAATACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYGLSIT*ICNTAS
Trigger: GGAAGCTGTATTACAGATCCAGGTAATCGAGAGACC...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp ATGGGTTTATTGGAATGTAACCCCACTGTAACTCAAGGAATACCTATAATGTCTGGTCTCTCGATTACCTaGATCTGTAATACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: MGLLECNPTVTQGIPIMSGLSIT*ICNTAS
Trigger: GGAAGCTGTATTACAGATCCAGGTAATCGAGAGACC...AGACATTATAGGTATTCCTTGAGTTACAGTGGGGTTACATTCCAATAAACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR CCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACGAAACACTGTGTGCATaGTATTTCCTGAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYETLCA*YFLRSL
Trigger: GAGAGACCTCAGGAAATACCATGCACACAGTGTTTC...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp CAGTGCAAAGTAAGTTCCATACTAAACCACATTGCAAGGTTACATCTTTTTCAGATTTTAGTGGAATCTTaGCTGTGCACGAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: QCKVSSILNHIARLHLFQILVES*LCTSMS
Trigger: TGACATGCTCGTGCACAGTCAAGATTCCACTAAAAT...CTGAAAAAGATGTAACCTTGCAATGTGGTTTAGTATGGAACTTACTTTGCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp GTGCAAAGTAAGTTCCATACTAAACCACATTGCAAGGTTACATCTTTTTCAGTGATTTTAGTGGAATCTTaGCTGTGCACGAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: VQSKFHTKPHCKVTSFSVILVES*LCTSMS
Trigger: TGACATGCTCGTGCACAGTCAAGATTCCACTAAAAT...CACTGAAAAAGATGTAACCTTGCAATGTGGTTTAGTATGGAACTTACTTTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp CAGTGCAAAGTAAGTTCCATACTAAACCACATTGCAAGGTTACATCTTTTTCAGAGAATACTGATGAGATaGAGAGACTTAGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: QCKVSSILNHIARLHLFQRILMR*RDLGAP
Trigger: AGGTGCACCTAAGTCTCTTCATCTCATCAGTATTCT...CTGAAAAAGATGTAACCTTGCAATGTGGTTTAGTATGGAACTTACTTTGCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp TTAAGAGTTTTTCGAAAGAGAAGGCGCAGTAGTCATCGTGAGTGTTTCATTGAATGTGCACCATTATTCTaGTGTCCATCGAGATTTAAC +
Preference number: 4 (lower is better)
Translates to: LRVFRKRRRSSHRECFIECAPLF*CPSRFN
Trigger: GTTAAATCTCGATGGACATCAGAATAATGGTGCACA...TTCAATGAAACACTCACGATGACTACTGCGCCTTCTCTTTCGAAAAACTCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATTCTAAGGAGTGCAACTaGCATCTCTTATTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDSKECN*HLLFFL
Trigger: TAAGAAGAATAAGAGATGTCAGTTGCACTCCTTAGA...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTCCCTTCCATGCTAGATaGATATCCACAATCACTACC +
Preference number: 4 (lower is better)
Translates to: TLRFNITSKHFASGCLLCPFHAR*ISTITT
Trigger: GGTAGTGATTGTGGATATTCATCTAGCATGGAAGGG...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTCAAATGGGCCTCTTGTaGTCATTTAACCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: TLRFNITSKHFASGCLLCQMGLL*SFNRQY
Trigger: ATACTGCCGGTTAAATGATCACAAGAGGCCCATTTG...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp AAGTCCACCTGTAAACTAAATAATGCGAAGAAAGCCCGTTTTGAAGAAAGGGCCAGCTTAAGTTTTATTTaGCTTAGTCACAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: KSTCKLNNAKKARFEERASLSFI*LSHKST
Trigger: TGTGGACTTGTGACTAAGGCAAATAAAACTTAAGCT...GGCCCTTTCTTCAAAACGGGCTTTCTTCGCATTATTTAGTTTACAGGTGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR GCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATGTTCTCTTCAGAATTTaGCCAACATTCAACACAACT +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDVLFRI*PTFNTT
Trigger: AGTTGTGTTGAATGTTGGGCAAATTCTGAAGAGAAC...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATTGTATAAAGCTTCTTTaGATCAGTCATGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDCIKLL*ISHAAS
Trigger: AGAAGCTGCATGACTGATGCAAAGAAGCTTTATACA...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACAAAGGTTTTGGCTTGTaGGTATCTAAGGAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYKGFGL*VSKECN
Trigger: GTTGCACTCCTTAGATACGCACAAGCCAAAACCTTT...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACAGTAGCCCTTTTCTTTaGTGCAGTCAAGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYSSPFL*CSQVHQ
Trigger: TTGGTGAACTTGACTGCAGCAAAGAAAAGGGCTACT...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTAAGAGTTTTTCGAAAGAGAAGGCGCAGTAGTCATCGTGAGTGTTTCATTGAATATATCTATTGTCTTTaGATGCCTTTCTCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: LRVFRKRRRSSHRECFIEYIYCL*MPFSSP
Trigger: GGGCGAAGAGAAAGGCATGCAAAGACAATAGATATA...TTCAATGAAACACTCACGATGACTACTGCGCCTTCTCTTTCGAAAAACTCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ATGGGTTTATTGGAATGTAACCCCACTGTAACTCAAGGAATACCTATAATGTCTGGTACATTTTTCCTATaGTCAAACCAAGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: MGLLECNPTVTQGIPIMSGTFFL*SNQGNG
Trigger: GCCATTGCCTTGGTTTGAGCATAGGAAAAATGTACC...AGACATTATAGGTATTCCTTGAGTTACAGTGGGGTTACATTCCAATAAACCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR TCA 90 bp AAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCCATACTAAACCACATTGCAACAAAGGTGGTTATGTaGATATACCAAGAACTAGTG +
Preference number: 4 (lower is better)
Translates to: KFNRQIQCKVSSILNHIATKVVM*IYQELV
Trigger: CACTAGTTCTTGGTATATTCACATAACCACCTTTGT...TGCAATGTGGTTTAGTATGGAACTTACTTTGCACTGTATCTGGCGGTTGAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR TCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTTCACCGTGTTCATCATaGTTACAAATGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: TLRFNITSKHFASGCLLCSPCSS*LQMPSV
Trigger: CACTGAAGGCATTTGTAATCATGATGAACACGGTGA...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTAAGAGTTTTTCGAAAGAGAAGGCGCAGTAGTCATCGTGAGTGTTTCATTGAAGGAGGACTTTATTTTTaGAATCAGTGCAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: LRVFRKRRRSSHRECFIEGGLYF*NQCKTC
Trigger: ACAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCC...TTCAATGAAACACTCACGATGACTACTGCGCCTTCTCTTTCGAAAAACTCTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTAAGAGTTTTTCGAAAGAGAAGGCGCAGTAGTCATCGTGAGTGTTTCATTGAAAATTTCTCCTTCAGATaGTGTCGGTATTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LRVFRKRRRSSHRECFIENFSFR*CRYCSL
Trigger: TAGAGAACAATACCGACAGCATCTGAAGGAGAAATT...TTCAATGAAACACTCACGATGACTACTGCGCCTTCTCTTTCGAAAAACTCTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACAGGTTCTGCAAACTGTaGTACATTTTTCCTATGCTC +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYRFCKL*YIFPML
Trigger: GAGCATAGGAAAAATGTACCACAGTTTGCAGAACCT...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR TCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTCTAAGGAGTGCAACTaGCATCTCTTATTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYSKECN*HLLFFL
Trigger: TAAGAAGAATAAGAGATGTCAGTTGCACTCCTTAGA...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTAATACTTAGATCCTGTTaGTTAAGCATACCATGTCGC +
Preference number: 4 (lower is better)
Translates to: FCTLRFNITSKHFASGCLILRSC*LSIPCR
Trigger: GCGACATGGTATGCTTAAGCAACAGGATCTAAGTAT...TAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACGGAGGACTTTATTTTTaGAATCAGTGCAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: FAHCALTLHPNILQVDVYGGLYF*NQCKTC
Trigger: ACAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCC...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTATCATCTCAAAACTCTTaGGTAAAGCATCAACACCAA +
Preference number: 4 (lower is better)
Translates to: FCTLRFNITSKHFASGCLSSQNS*VKHQHQ
Trigger: TTGGTGTTGATGCTTTACGCAAGAGTTTTGAGATGA...TAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTGGTATTGTTCTCTATTaGTGTAGAAAGACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: TLRFNITSKHFASGCLLCGIVLY*CRKTGY
Trigger: ATAACCAGTCTTTCTACAGCAATAGAGAACAATACC...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTAGGTATTGTTCTCTATTaGTGTAGAAAGACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: FCTLRFNITSKHFASGCLGIVLY*CRKTGY
Trigger: ATAACCAGTCTTTCTACAGCAATAGAGAACAATACC...TAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR GCA 90 bp TTTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTATACATCCAAACATTTTaGAAGTGGATGTCTACTTTG +
Preference number: 4 (lower is better)
Translates to: FCTLRFNITSKHFASGCLYIQTF*KWMSTL
Trigger: CAAAGTAGACATCCACTTGCAAAATGTTTGGATGTA...TAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS GCA 90 bp TCGTCCCCGACGCTGCCGTTGCCACCGTCACCACCTCCTCCCAGCTaGCGCCGCCGCCGCCGCTGCTGTTTCTGCCGCCGCCGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: SSPTLPLPPSPPPPS*RRRRRCCFCRRRCR
Trigger: GCGGCAGCGGCGGCGGCAGAAACAGCAGCGGCGGCGGCGGCGGCAGCTGGGAGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGGACGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000611219.1
ENST00000613102.5
ENST00000616019.1
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633758.1
ENST00000633767.1
ENST00000633772.1
CDS GCA 90 bp CCCGTCCCTGCACACTGCCACGAGTCGCGCCATCGTCCCCGACGCTaGCGTTGCCACCGTCACCACCTCCTCCCAGCTGCCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: PVPAHCHESRHRPRR*RCHRHHLLPAAAAA
Trigger: GGCGGCGGCGGCAGCTGGGAGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGGACGATGGCGCGACTCGTGGCAGTGTGCAGGGACGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000611219.1
ENST00000613102.5
ENST00000616019.1
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633758.1
ENST00000633767.1
ENST00000633772.1
CDS CCA 90 bp TCTGCTCCCTGTTACTGGCTGACGAGGCCCGCGTCAGGGCCGGCGTaGGCGGGAGCGCAGCTCCGAATGTCGTTTCCTCTACGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SAPCYWLTRPASGPA*AGAQLRMSFPLRAV
Trigger: GACTGCCCGTAGAGGAAACGACATTCGGAGCTGCGCTCCCGCCCACGCCGGCCCTGACGCGGGCCTCGTCAGCCAGTAACAGGGAGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000611219.1
ENST00000613102.5
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633758.1
ENST00000633767.1
CDS GCA 90 bp TCCGACCTTCACCGTTTTCGTGGTCGCCTCGCTAACTCCCACCTCTaGTCCCTGTTACTGGCTGACGAGGCCCGCGTCAGGGCCGGCGTG +
Preference number: 5 (lower is better)
Translates to: SDLHRFRGRLANSHL*SLLLADEARVRAGV
Trigger: CACGCCGGCCCTGACGCGGGCCTCGTCAGCCAGTAACAGGGAGCAGAGGTGGGAGTTAGCGAGGCGACCACGAAAACGGTGAAGGTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000611219.1
ENST00000613102.5
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633758.1
ENST00000633767.1
CDS-3UTR CAA 90 bp CGGAGCTCTGGGCTTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCTACGGAGCTCTGGGCTaGGGGCCGACAGAGGTTACC +
Preference number: 5 (lower is better)
Translates to: RSSGLGADRGYRATHCKGYGALG*GPTEVT
Trigger: GGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCGTA...GCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS GCA 90 bp CGGAGCTCTGGGCTTGGGGCCGACAGAGGTTACCGAGCCACCCACTaGAAAGGCGAGTTTGTGGGGCCTGCTGAAGAGAAGGCCTCGCCT +
Preference number: 5 (lower is better)
Translates to: RSSGLGADRGYRATH*KGEFVGPAEEKASP
Trigger: AGGCGAGGCCTTCTCTTCAGCAGGCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS GCA 90 bp GGCGAGTTTGTGGGGCCTGCTGAAGAGAAGGCCTCGCCTAGGAGTTaGAACACACTCTTTCTCCAGTGCGCAGCGCTCGGCCTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: GEFVGPAEEKASPRS*NTLFLQCAALGLGE
Trigger: CTCCCCCAGGCCGAGCGCTGCGCACTGGAGAAAGAGTGTGTTGCAACTCCTAGGCGAGGCCTTCTCTTCAGCAGGCCCCACAAACTCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS CCA 90 bp GGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTaGGGCCTGCTGAAGAGAAGGCCTCGCCTAGGAGTTGCAACACAC +
Preference number: 5 (lower is better)
Translates to: GPTEVTEPPTAKASL*GLLKRRPRLGVATH
Trigger: GTGTGTTGCAACTCCTAGGCGAGGCCTTCTCTTCAGCAGGCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CAA 90 bp TTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTGGGGCACTGCAAAGGCGAGTTaGTGGGGCCTGCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LGPTEVTEPPTAKASLWGTAKAS*WGLLKR
Trigger: TCTCTTCAGCAGGCCCCACAAACTCGCCTTTGCAGT...GCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CAA 90 bp ACACAGGTAGCAGTGCAGCTGCGACATTACCAGGTAATTAAGCCTCCCCGAGGGTACGGAGCTCTGGGCTaGGGGCCGACAGAGGTTACC +
Preference number: 5 (lower is better)
Translates to: TQVAVQLRHYQVIKPPRGYGALG*GPTEVT
Trigger: GGTAACCTCTGTCGGCCCCAAGCCCAGAGCTCCGTA...CCCTCGGGGAGGCTTAATTACCTGGTAATGTCGCAGCTGCACTGCTACCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CAA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAATCCCCGACGCTGCCGTaGCCACCGTCACCACCTCCT +
Preference number: 5 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKSPTLP*PPSPPP
Trigger: AGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGGA...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp TTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTGGGGCACCCGGAACTGGGTCTaGACACTCAAGATGAGCAAT +
Preference number: 5 (lower is better)
Translates to: LGPTEVTEPPTAKASLWGTRNWV*TLKMSN
Trigger: ATTGCTCATCTTGAGTGTCAAGACCCAGTTCCGGGT...GCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CAA 90 bp TTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTGGGGCCGAAGAAAGCCCGTTTaGAAGAAAGGGCCTAGCAAT +
Preference number: 5 (lower is better)
Translates to: LGPTEVTEPPTAKASLWGRRKPV*KKGPSN
Trigger: ATTGCTAGGCCCTTTCTTCAAAACGGGCTTTCTTCG...GCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS TCA 90 bp AAGAGACGCTCCACACTGCGACGACAACCAACACATGGGACAAGCTaGGAAAGTGCACTCAGGACTTCGCGTGATGTCACCACCATGGCA +
Preference number: 5 (lower is better)
Translates to: KRRSTLRRQPTHGTS*ESALRTSRDVTTMA
Trigger: TGCCATGGTGGTGACATCACGCGAAGTCCTGAGTGCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGTCGCAGTGTGGAGCGTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000613102.5
ENST00000616019.1
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633767.1
ENST00000633772.1
CDS-3UTR CAA 90 bp AAGTCCACCTGTAAACTAAATAATGCGAAGAAAGCCCGTTTTGAAGAAAGGGCCTCCCCGACGCTGCCGTaGCCACCGTCACCACCTCCT +
Preference number: 5 (lower is better)
Translates to: KSTCKLNNAKKARFEERASPTLP*PPSPPP
Trigger: AGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGGA...GGCCCTTTCTTCAAAACGGGCTTTCTTCGCATTATTTAGTTTACAGGTGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CAA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAACAGACAGGACTCCCTaGGGCCCTACTGTTAGGGGT +
Preference number: 5 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKTDRTP*GPTVRG
Trigger: ACCCCTAACAGTAGGGCCCAAGGGAGTCCTGTCTGT...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp CCACAGTACAATAAAAGCAAAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCTCCCCGACGCTGCCGTaGCCACCGTCACCACCTCCT +
Preference number: 5 (lower is better)
Translates to: PQYNKSKIQPPDTVQSKFSPTLP*PPSPPP
Trigger: AGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGGA...GAACTTACTTTGCACTGTATCTGGCGGTTGAATTTTGCTTTTATTGTACTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CAA 90 bp TTAAGAGTTTTTCGAAAGAGAAGGCGCAGTAGTCATCGTGAGTGTTTCATTGAATCCCCGACGCTGCCGTaGCCACCGTCACCACCTCCT +
Preference number: 5 (lower is better)
Translates to: LRVFRKRRRSSHRECFIESPTLP*PPSPPP
Trigger: AGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGGA...TTCAATGAAACACTCACGATGACTACTGCGCCTTCTCTTTCGAAAAACTCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp GCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGAACTAATGCCCAAAGGTTTTGGCTaGTGCGTATCTAAGGAGTGC +
Preference number: 5 (lower is better)
Translates to: AGLRSHATKDTSLKKELMPKGFG*CVSKEC
Trigger: GCACTCCTTAGATACGCACAAGCCAAAACCTTTGGG...CATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS GCA 90 bp TTTCTGACTCACAAGGACTGTTGCACAAATGATCACATCTCTCTCTaGCCCCAACCCACACTCTCACACGATGAGCACCCAATGGAACTG +
Preference number: 5 (lower is better)
Translates to: FLTHKDCCTNDHISL*PQPTLSHDEHPMEL
Trigger: CAGTTCCATTGGGTGCTCATCGTGTGAGAGTGTGGGTTGGGGGCAGAGAGAGATGTGATCATTTGTGCAACAGTCCTTGTGAGTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612563.1
ENST00000633235.1
CDS-3UTR CAA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGTGCTGCCACAGGCTTaGCAGCTGCTATTTTCTATG +
Preference number: 5 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKVLPQA*QLLFSM
Trigger: CATAGAAAATAGCAGCTGCAAAGCCTGTGGCAGCAC...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS GCA 90 bp CACAAGAGTCATCACCGTGTTCATCATGATTACAAATGCCTTCAGTaGAGGCAACATCCGAACCCTCCCGAGAACCTGTTTCACTCCCTT +
Preference number: 5 (lower is better)
Translates to: HKSHHRVHHDYKCLQ*RQHPNPPENLFHSL
Trigger: AAGGGAGTGAAACAGGTTCTCGGGAGGGTTCGGATGTTGCCTGCACTGAAGGCATTTGTAATCATGATGAACACGGTGATGACTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613102.5
ENST00000619573.1
ENST00000621686.2
ENST00000633649.1
CDS GCA 90 bp TCCTATGCTCAAACCAAGGCAATGGCTGCCCACCCTTTTCAGAGCTaGAACAGCTTTCAGGATGTGTATCTTTGGTCTTGTCACGGTGAA +
Preference number: 5 (lower is better)
Translates to: SYAQTKAMAAHPFQS*NSFQDVYLWSCHGE
Trigger: TTCACCGTGACAAGACCAAAGATACACATCCTGAAAGCTGTTGCAGCTCTGAAAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS CCA 90 bp GCCCACCCTTTTCAGAGCTGCAACAGCTTTCAGGATGTGTATCTTTaGTCTTGTCACGGTGAAACACTGTGTGCATGGTATTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: AHPFQSCNSFQDVYL*SCHGETLCAWYFLR
Trigger: CCTCAGGAAATACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATACACATCCTGAAAGCTGTTGCAGCTCTGAAAAGGGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS CCA 90 bp TCCGGAATCGGGACCAAACAACGTTTCTGTAGGTTCTGCAAACTGTaGTACATTTTTCCTATGCTCAAACCAAGGCAATGGCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: SGIGTKQRFCRFCKL*YIFPMLKPRQWLPT
Trigger: GGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAATGTACCACAGTTTGCAGAACCTACAGAAACGTTGTTTGGTCCCGATTCCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS-3UTR CAA 90 bp AGTGGAATCTTGACTGTGCACGAGCATGTCACTCTGCCCCCAGTAATTAAGCTTCGAAGAAAGCCCGTTTaGAAGAAAGGGCCTAGCAAT +
Preference number: 5 (lower is better)
Translates to: SGILTVHEHVTLPPVIKLRRKPV*KKGPSN
Trigger: ATTGCTAGGCCCTTTCTTCAAAACGGGCTTTCTTCG...AAGCTTAATTACTGGGGGCAGAGTGACATGCTCGTGCACAGTCAAGATTCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CAA 90 bp GGAATACCTATAATGTCTTCTACTGAGACAGAGGCGGCCATGGAAACGTGTTCCAGTTCAACTAAGCTCTaGGCACCTTTTCCGGAATCG +
Preference number: 5 (lower is better)
Translates to: GIPIMSSTETEAAMETCSSSTKL*APFPES
Trigger: CGATTCCGGAAAAGGTGCCAAGAGCTTAGTTGAACT...GGAACACGTTTCCATGGCCGCCTCTGTCTCAGTAGAAGACATTATAGGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS TCA 90 bp GAGCTGCAACAGCTTTCAGGATGTGTATCTTTGGTCTTGTCACGGTaGAACACTGTGTGCATGGTATTTCCTGAGGTCTCTCGATTACCT +
Preference number: 5 (lower is better)
Translates to: ELQQLSGCVSLVLSR*NTVCMVFPEVSRLP
Trigger: AGGTAATCGAGAGACCTCAGGAAATACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATACACATCCTGAAAGCTGTTGCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS GCA 90 bp ATGTATGTGTCGTTCATGTGGACAGCACCGCAAGCCTTCATAAAGTaGAGCACAGTAGCCCTTTTCTTTGCTGCAGTCAAGTTCACCAAT +
Preference number: 5 (lower is better)
Translates to: MYVSFMWTAPQAFIK*STVALFFAAVKFTN
Trigger: ATTGGTGAACTTGACTGCAGCAAAGAAAAGGGCTACTGTGCTGCACTTTATGAAGGCTTGCGGTGCTGTCCACATGAACGACACATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000613102.5
ENST00000617860.4
ENST00000618837.4
ENST00000619573.1
ENST00000621686.2
ENST00000632601.1
ENST00000633649.1
ENST00000633767.1
CDS GCA 90 bp GCAAACTGTGGTACATTTTTCCTATGCTCAAACCAAGGCAATGGCTaGCCACCCTTTTCAGAGCTGCAACAGCTTTCAGGATGTGTATCT +
Preference number: 5 (lower is better)
Translates to: ANCGTFFLCSNQGNG*PPFSELQQLSGCVS
Trigger: AGATACACATCCTGAAAGCTGTTGCAGCTCTGAAAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAATGTACCACAGTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS GCA 90 bp GGCACCTTTTCCGGAATCGGGACCAAACAACGTTTCTGTAGGTTCTaGAAACTGTGGTACATTTTTCCTATGCTCAAACCAAGGCAATGG +
Preference number: 5 (lower is better)
Translates to: GTFSGIGTKQRFCRF*KLWYIFPMLKPRQW
Trigger: CCATTGCCTTGGTTTGAGCATAGGAAAAATGTACCACAGTTTGCAGAACCTACAGAAACGTTGTTTGGTCCCGATTCCGGAAAAGGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS CCA 90 bp TGCAATGAAGTCTGTTTCACAGCAAACATGTATGTGTCGTTCATGTaGACAGCACCGCAAGCCTTCATAAAGTGCAGCACAGTAGCCCTT +
Preference number: 5 (lower is better)
Translates to: CNEVCFTANMYVSFM*TAPQAFIKCSTVAL
Trigger: AAGGGCTACTGTGCTGCACTTTATGAAGGCTTGCGGTGCTGTCCACATGAACGACACATACATGTTTGCTGTGAAACAGACTTCATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000613102.5
ENST00000617860.4
ENST00000618837.4
ENST00000619573.1
ENST00000621686.2
ENST00000632601.1
ENST00000633649.1
ENST00000633767.1
CDS CCA 90 bp TTCTGCAAACTGTGGTACATTTTTCCTATGCTCAAACCAAGGCAATaGCTGCCCACCCTTTTCAGAGCTGCAACAGCTTTCAGGATGTGT +
Preference number: 5 (lower is better)
Translates to: FCKLWYIFPMLKPRQ*LPTLFRAATAFRMC
Trigger: ACACATCCTGAAAGCTGTTGCAGCTCTGAAAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAATGTACCACAGTTTGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS-3UTR CAA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAACCTCCCAAAGGTTTaGGCTTGTGCGTATCTAAGG +
Preference number: 5 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPNLPKV*ACAYLR
Trigger: CCTTAGATACGCACAAGCCAAAACCTTTGGGAGGTT...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAACGGAGGACTTTATTTTaGCAATCAGTGCAAAACCTG +
Preference number: 5 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKRRTLF*QSVQNL
Trigger: CAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCCG...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS GCA 90 bp AACAACGTTTCTGTAGGTTCTGCAAACTGTGGTACATTTTTCCTATaGTCAAACCAAGGCAATGGCTGCCCACCCTTTTCAGAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: NNVSVGSANCGTFFL*SNQGNGCPPFSELQ
Trigger: TTGCAGCTCTGAAAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAATGTACCACAGTTTGCAGAACCTACAGAAACGTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS-3UTR CAA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAATGTATAAAGCTTCTTaGCATCAGTCATGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKMYKAS*HQSCSF
Trigger: GAAGCTGCATGACTGATGCAAAGAAGCTTTATACAT...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAATCACCAATAAGGATATaGTATGCTCGGAGGACTTTA +
Preference number: 5 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKSPIRI*YARRTL
Trigger: TAAAGTCCTCCGAGCATACAATATCCTTATTGGTGA...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp GCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAGAACTAATGTCTATTCTTCCGTTTTaGGCGTTTCTTTTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: AGLRSHATKDTSLKKELMSILPF*AFLFLL
Trigger: AAGCAAGAAAAGAAACGCCAAAAACGGAAGAATAGA...CATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp TTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCCCCAAAAGTTCAACTAAGCTCTaGGCACCTTTTCCGGAATCG +
Preference number: 5 (lower is better)
Translates to: FQSSCINHEWKDRNEVPKSSTKL*APFPES
Trigger: CGATTCCGGAAAAGGTGCCAAGAGCTTAGTTGAACT...TTTGGGGACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS TCA 90 bp ATCTTTGGTCTTGTCACGGTGAAACACTGTGTGCATGGTATTTCCTaGGGTCTCTCGATTACCTGGATCTGTAATACAGCTTCCAAGCTT +
Preference number: 5 (lower is better)
Translates to: IFGLVTVKHCVHGIS*GLSITWICNTASKL
Trigger: AAGCTTGGAAGCTGTATTACAGATCCAGGTAATCGAGAGACCTCAGGAAATACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS CCA 90 bp TTAATAAGAACACTGCCATTCACAGCCATTCAGAGTCACCCAGGCTaGAAATCTGAGTTAATTCCAACTTCTCCCTGGGTCTTCCTATTG +
Preference number: 5 (lower is better)
Translates to: LIRTLPFTAIQSHPG*KSELIPTSPWVFLL
Trigger: CAATAGGAAGACCCAGGGAGAAGTTGGAATTAACTCAGATTTCCAGCCTGGGTGACTCTGAATGGCTGTGAATGGCAGTGTTCTTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619573.1
ENST00000633649.1
CDS-3UTR CAA 90 bp AAGTCCACCTGTAAACTAAATAATGCGAAGAAAGCCCGTTTTGAAGAAAGGGCCTCTGAGATGTGTGCTTaGACAAAAGCAGCGTCTCCT +
Preference number: 5 (lower is better)
Translates to: KSTCKLNNAKKARFEERASEMCA*TKAASP
Trigger: AGGAGACGCTGCTTTTGTCAAAGCACACATCTCAGA...GGCCCTTTCTTCAAAACGGGCTTTCTTCGCATTATTTAGTTTACAGGTGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CAA 90 bp AATCATATGGCAGGCCTGCGCAGCCACGCAACTAAAGACACAAGCCTGAAGAAAAAATTCCTCACAAAGTaGTTCCAATCTGCTAATACC +
Preference number: 5 (lower is better)
Translates to: NHMAGLRSHATKDTSLKKKFLTK*FQSANT
Trigger: GGTATTAGCAGATTGGAACAACTTTGTGAGGAATTT...TTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCCATATGATT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp GGAATACCTATAATGTCTTCTACTGAGACAGAGGCGGCCATGGAAACGTGTTCCGGGTTTATTGGGATGTaGAATGTATTTTCAACTCGC +
Preference number: 5 (lower is better)
Translates to: GIPIMSSTETEAAMETCSGFIGM*NVFSTR
Trigger: GCGAGTTGAAAATACATTCAACATCCCAATAAACCC...GGAACACGTTTCCATGGCCGCCTCTGTCTCAGTAGAAGACATTATAGGTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS TCA 90 bp TTTGCTCCAGCCGTTGTCAACCAGCCACTACAAATGGGCCTCTTGTaGTCATTTAACCGGCAGTATTTATTAAATTTCTCCTTCAGATGC +
Preference number: 5 (lower is better)
Translates to: FAPAVVNQPLQMGLL*SFNRQYLLNFSFRC
Trigger: GCATCTGAAGGAGAAATTTAATAAATACTGCCGGTTAAATGATCACAAGAGGCCCATTTGTAGTGGCTGGTTGACAACGGCTGGAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613102.5
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
CDS-3UTR CAA 90 bp AAGTCCACCTGTAAACTAAATAATGCGAAGAAAGCCCGTTTTGAAGAAAGGGCCCATTTTAGTGGAATCTaGACTGTGCACGAGCATGTC +
Preference number: 5 (lower is better)
Translates to: KSTCKLNNAKKARFEERAHFSGI*TVHEHV
Trigger: GACATGCTCGTGCACAGTCAAGATTCCACTAAAATG...GGCCCTTTCTTCAAAACGGGCTTTCTTCGCATTATTTAGTTTACAGGTGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CAA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGACGTTCTCTTCAGAATTaGCCCAACATTCAACACAAC +
Preference number: 5 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRRSLQN*PNIQHN
Trigger: GTTGTGTTGAATGTTGGGCAAATTCTGAAGAGAACG...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATAACCTCCCAAAGGTTTaGGCTTGTGCGTATCTAAGG +
Preference number: 5 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDNLPKV*ACAYLR
Trigger: CCTTAGATACGCACAAGCCAAAACCTTTGGGAGGTT...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp TTAAGAGTTTTTCGAAAGAGAAGGCGCAGTAGTCATCGTGAGTGTTTCATTGAAGTGCTGCCACAGGCTTaGCAGCTGCTATTTTCTATG +
Preference number: 5 (lower is better)
Translates to: LRVFRKRRRSSHRECFIEVLPQA*QLLFSM
Trigger: CATAGAAAATAGCAGCTGCAAAGCCTGTGGCAGCAC...TTCAATGAAACACTCACGATGACTACTGCGCCTTCTCTTTCGAAAAACTCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATAATTTGCTCCAGCCGTaGTCAACCAGCCACTACAAA +
Preference number: 5 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDNLLQP*STSHYK
Trigger: TTTGTAGTGGCTGGTTGACAACGGCTGGAGCAAATT...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp CCACAGTACAATAAAAGCAAAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCTCTGAGATGTGTGCTTaGACAAAAGCAGCGTCTCCT +
Preference number: 5 (lower is better)
Translates to: PQYNKSKIQPPDTVQSKFSEMCA*TKAASP
Trigger: AGGAGACGCTGCTTTTGTCAAAGCACACATCTCAGA...GAACTTACTTTGCACTGTATCTGGCGGTTGAATTTTGCTTTTATTGTACTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CAA 90 bp CAGTGCAAAGTAAGTTCCATACTAAACCACATTGCAAGGTTACATCTTTTTCAGACCCGGAACTGGGTCTaGACACTCAAGATGAGCAAT +
Preference number: 5 (lower is better)
Translates to: QCKVSSILNHIARLHLFQTRNWV*TLKMSN
Trigger: ATTGCTCATCTTGAGTGTCAAGACCCAGTTCCGGGT...CTGAAAAAGATGTAACCTTGCAATGTGGTTTAGTATGGAACTTACTTTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CAA 90 bp ACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGACTTGAGCTATATCTATaGTCTTTGCATGCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: TSLKKELMRIPPPSPKTRLELYL*SLHAFL
Trigger: GAGAAAGGCATGCAAAGACAATAGATATAGCTCAAG...TCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp ACTAAAGACACAAGCCTGAAGAAAGAACTAATGAGGATACCTCCACCGTCTCCCAAATTCCTCACAAAGTaGTTCCAATCTGCTAATACC +
Preference number: 5 (lower is better)
Translates to: TKDTSLKKELMRIPPPSPKFLTK*FQSANT
Trigger: GGTATTAGCAGATTGGAACAACTTTGTGAGGAATTT...GGGAGACGGTGGAGGTATCCTCATTAGTTCTTTCTTCAGGCTTGTGTCTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp TTAAGAGTTTTTCGAAAGAGAAGGCGCAGTAGTCATCGTGAGTGTTTCATTGAAAATTTGCTCCAGCCGTaGTCAACCAGCCACTACAAA +
Preference number: 5 (lower is better)
Translates to: LRVFRKRRRSSHRECFIENLLQP*STSHYK
Trigger: TTTGTAGTGGCTGGTTGACAACGGCTGGAGCAAATT...TTCAATGAAACACTCACGATGACTACTGCGCCTTCTCTTTCGAAAAACTCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp AAATTCAACCGCCAGATACAGTGCAAAGTAAGTTCCATACTAAACCACATTGCACATTTTAGTGGAATCTaGACTGTGCACGAGCATGTC +
Preference number: 5 (lower is better)
Translates to: KFNRQIQCKVSSILNHIAHFSGI*TVHEHV
Trigger: GACATGCTCGTGCACAGTCAAGATTCCACTAAAATG...TGCAATGTGGTTTAGTATGGAACTTACTTTGCACTGTATCTGGCGGTTGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS-3UTR CAA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATCGGAGGACTTTATTTTaGCAATCAGTGCAAAACCTG +
Preference number: 5 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDRRTLF*QSVQNL
Trigger: CAGGTTTTGCACTGATTGCAAAAATAAAGTCCTCCG...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACAGTTCAACTAAGCTCTaGGCACCTTTTCCGGAATCG +
Preference number: 5 (lower is better)
Translates to: FAHCALTLHPNILQVDVYSSTKL*APFPES
Trigger: CGATTCCGGAAAAGGTGCCAAGAGCTTAGTTGAACT...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp TTCCAGAGTAGTTGCATAAACCACGAGTGGAAGGACAGAAATGAAGTCCCCAAAGTTATAATGGGTTTATaGGAATGTAACCCCACTGTA +
Preference number: 5 (lower is better)
Translates to: FQSSCINHEWKDRNEVPKVIMGL*ECNPTV
Trigger: TACAGTGGGGTTACATTCCAATAAACCCATTATAAC...TTTGGGGACTTCATTTCTGTCCTTCCACTCGTGGTTTATGCAACTACTCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS GCA 90 bp TCCCAAGCAGGTCAGAACTTCTTCTTGAGCTATATCTATTGTCTTTaGATGCCTTTCTCTTCGCCTATAAAAGGGAATAATCACACACTA +
Preference number: 5 (lower is better)
Translates to: SQAGQNFFLSYIYCL*MPFSSPIKGNNHTL
Trigger: TAGTGTGTGATTATTCCCTTTTATAGGCGAAGAGAAAGGCATGCAAAGACAATAGATATAGCTCAAGAAGAAGTTCTGACCTGCTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617860.4
ENST00000632601.1
CDS-3UTR CAA 90 bp GAACTAATGAGGATACCTCCACCGTCTCCCAAAACAAGAAAGAATCACATTGATTCACCAATAAGGATATaGTATGCTCGGAGGACTTTA +
Preference number: 5 (lower is better)
Translates to: ELMRIPPPSPKTRKNHIDSPIRI*YARRTL
Trigger: TAAAGTCCTCCGAGCATACAATATCCTTATTGGTGA...ATCAATGTGATTCTTTCTTGTTTTGGGAGACGGTGGAGGTATCCTCATTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTAGTTCAACTAAGCTCTaGGCACCTTTTCCGGAATCG +
Preference number: 5 (lower is better)
Translates to: TLRFNITSKHFASGCLLCSSTKL*APFPES
Trigger: CGATTCCGGAAAAGGTGCCAAGAGCTTAGTTGAACT...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp TTAAGAGTTTTTCGAAAGAGAAGGCGCAGTAGTCATCGTGAGTGTTTCATTGAAATGTATAAAGCTTCTTaGCATCAGTCATGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LRVFRKRRRSSHRECFIEMYKAS*HQSCSF
Trigger: GAAGCTGCATGACTGATGCAAAGAAGCTTTATACAT...TTCAATGAAACACTCACGATGACTACTGCGCCTTCTCTTTCGAAAAACTCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp TTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTGGCGTTTCTTTTCTaGCTTGAGTTCTCTTACTCG +
Preference number: 5 (lower is better)
Translates to: FAHCALTLHPNILQVDVYLAFLF*LEFSYS
Trigger: CGAGTAAGAGAACTCAAGCAAGAAAAGAAACGCCAA...GTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS GCA 90 bp TGCATAGACTATATGCAAATATTACACCATTTTACATCAGGGACTTaGACATCTGCAGATTTTGGTATCTACAGGAAGTCCTGGAATCAA +
Preference number: 5 (lower is better)
Translates to: CIDYMQILHHFTSGT*TSADFGIYRKSWNQ
Trigger: TTGATTCCAGGACTTCCTGTAGATACCAAAATCTGCAGATGTGCAAGTCCCTGATGTAAAATGGTGTAATATTTGCATATAGTCTATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617860.4
ENST00000632601.1
CDS-3UTR CAA 90 bp ACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTACTTTGTCGTTCTCTTCAGAATTaGCCCAACATTCAACACAAC +
Preference number: 5 (lower is better)
Translates to: TLRFNITSKHFASGCLLCRSLQN*PNIQHN
Trigger: GTTGTGTTGAATGTTGGGCAAATTCTGAAGAGAACG...ACAAAGTAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp TTTTGCACATTGCGCTTTAACATTACATCCAAACATTTTGCAAGTGGATGTCTATTGGCGTTTCTTTTCTaGCTTGAGTTCTCTTACTCG +
Preference number: 5 (lower is better)
Translates to: FCTLRFNITSKHFASGCLLAFLF*LEFSYS
Trigger: CGAGTAAGAGAACTCAAGCAAGAAAAGAAACGCCAA...TAGACATCCACTTGCAAAATGTTTGGATGTAATGTTAAAGCGCAATGTGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613102.5
ENST00000621686.2
CDS-3UTR CAA 90 bp ATGGGTTTATTGGAATGTAACCCCACTGTAACTCAAGGAATACCTATAATGTCTGGGTTTATTGGGATGTaGAATGTATTTTCAACTCGC +
Preference number: 5 (lower is better)
Translates to: MGLLECNPTVTQGIPIMSGFIGM*NVFSTR
Trigger: GCGAGTTGAAAATACATTCAACATCCCAATAAACCC...AGACATTATAGGTATTCCTTGAGTTACAGTGGGGTTACATTCCAATAAACCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS-3UTR CAA 90 bp ATGGGTTTATTGGAATGTAACCCCACTGTAACTCAAGGAATACCTATAATGTCTGTTATAATGGGTTTATaGGAATGTAACCCCACTGTA +
Preference number: 5 (lower is better)
Translates to: MGLLECNPTVTQGIPIMSVIMGL*ECNPTV
Trigger: TACAGTGGGGTTACATTCCAATAAACCCATTATAAC...AGACATTATAGGTATTCCTTGAGTTACAGTGGGGTTACATTCCAATAAACCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS GCA 72 bp CCTCCCAGCTGCCGCCGCCGCCGCCGCTGCTGTTTCTaGCGCCGCCGCTGCCGCCTCCTCCCAGCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: PPSCRRRRRCCF*RRRCRLLPAPA
Trigger: GGCAGGAGCTGGGAGGAGGCGGCAGCGGCGGCGGCAGAAACAGCAGCGGCGGCGGCGGCGGCAGCTGGGAGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000611219.1
ENST00000613102.5
ENST00000616019.1
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633758.1
ENST00000633767.1
ENST00000633772.1
CDS CAA 72 bp CTGCCACGAGTCGCGCCATCGTCCCCGACGCTGCCGTaGCCACCGTCACCACCTCCTCCCAGCTGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: LPRVAPSSPTLP*PPSPPPPSCRR
Trigger: GCGGCGGCAGCTGGGAGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGGACGATGGCGCGACTCGTGGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000611219.1
ENST00000613102.5
ENST00000616019.1
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633758.1
ENST00000633767.1
ENST00000633772.1
CDS GCA 72 bp GCACACTGCCACGAGTCGCGCCATCGTCCCCGACGCTaGCGTTGCCACCGTCACCACCTCCTCCCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: AHCHESRHRPRR*RCHRHHLLPAA
Trigger: GGCAGCTGGGAGGAGGTGGTGACGGTGGCAACGGCAGCGTCGGGGACGATGGCGCGACTCGTGGCAGTGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000611219.1
ENST00000613102.5
ENST00000616019.1
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633758.1
ENST00000633767.1
ENST00000633772.1
CDS CCA 72 bp GTCGCCTCGCTAACTCCCACCTCTGCTCCCTGTTACTaGCTGACGAGGCCCGCGTCAGGGCCGGCGTGGGCG +
Preference number: 6 (lower is better)
Translates to: VASLTPTSAPCY*LTRPASGPAWA
Trigger: CGCCCACGCCGGCCCTGACGCGGGCCTCGTCAGCCAGTAACAGGGAGCAGAGGTGGGAGTTAGCGAGGCGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000611219.1
ENST00000613102.5
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633758.1
ENST00000633767.1
CDS CCA 72 bp TGTTACTGGCTGACGAGGCCCGCGTCAGGGCCGGCGTaGGCGGGAGCGCAGCTCCGAATGTCGTTTCCTCTA +
Preference number: 6 (lower is better)
Translates to: CYWLTRPASGPA*AGAQLRMSFPL
Trigger: TAGAGGAAACGACATTCGGAGCTGCGCTCCCGCCCACGCCGGCCCTGACGCGGGCCTCGTCAGCCAGTAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000611219.1
ENST00000613102.5
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633758.1
ENST00000633767.1
CDS GCA 72 bp GTGGGGCCTGCTGAAGAGAAGGCCTCGCCTAGGAGTTaGAACACACTCTTTCTCCAGTGCGCAGCGCTCGGC +
Preference number: 6 (lower is better)
Translates to: VGPAEEKASPRS*NTLFLQCAALG
Trigger: GCCGAGCGCTGCGCACTGGAGAAAGAGTGTGTTGCAACTCCTAGGCGAGGCCTTCTCTTCAGCAGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS CAA 90 bp TTGGGGCCGACAGAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTaGTGGGGCCTGCTGAAGAGAAGGCCTCGCCTAGGAGTTGCAACA +
Preference number: 6 (lower is better)
Translates to: LGPTEVTEPPTAKAS*WGLLKRRPRLGVAT
Trigger: TGTTGCAACTCCTAGGCGAGGCCTTCTCTTCAGCAGGCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTCTGTCGGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS CCA 72 bp GAGGTTACCGAGCCACCCACTGCAAAGGCGAGTTTGTaGGGCCTGCTGAAGAGAAGGCCTCGCCTAGGAGTT +
Preference number: 6 (lower is better)
Translates to: EVTEPPTAKASL*GLLKRRPRLGV
Trigger: AACTCCTAGGCGAGGCCTTCTCTTCAGCAGGCCCCACAAACTCGCCTTTGCAGTGGGTGGCTCGGTAACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611219.1
ENST00000633758.1
CDS TCA 72 bp TCCACACTGCGACGACAACCAACACATGGGACAAGCTaGGAAAGTGCACTCAGGACTTCGCGTGATGTCACC +
Preference number: 6 (lower is better)
Translates to: STLRRQPTHGTS*ESALRTSRDVT
Trigger: GGTGACATCACGCGAAGTCCTGAGTGCACTTTCTCAGCTTGTCCCATGTGTTGGTTGTCGTCGCAGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000613102.5
ENST00000616019.1
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633767.1
ENST00000633772.1
CDS GCA 72 bp CACAAGGACTGTTGCACAAATGATCACATCTCTCTCTaGCCCCAACCCACACTCTCACACGATGAGCACCCA +
Preference number: 6 (lower is better)
Translates to: HKDCCTNDHISL*PQPTLSHDEHP
Trigger: TGGGTGCTCATCGTGTGAGAGTGTGGGTTGGGGGCAGAGAGAGATGTGATCATTTGTGCAACAGTCCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612563.1
ENST00000633235.1
CDS CCA 72 bp CTTTGCATGCCTTTCTCTTCGCCCTCCTGCGAACTCTaGCTCAGCACGACCCAAAAGATGTGCAATGAAGTC +
Preference number: 6 (lower is better)
Translates to: LCMPFSSPSCEL*LSTTQKMCNEV
Trigger: GACTTCATTGCACATCTTTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGCGAAGAGAAAGGCATGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000618837.4
ENST00000619573.1
ENST00000621686.2
ENST00000633649.1
ENST00000633767.1
CDS GCA 72 bp CACAAGAGTCATCACCGTGTTCATCATGATTACAAATaGCTTCAGTGCAGGCAACATCCGAACCCTCCCGAG +
Preference number: 6 (lower is better)
Translates to: HKSHHRVHHDYK*LQCRQHPNPPE
Trigger: CTCGGGAGGGTTCGGATGTTGCCTGCACTGAAGGCATTTGTAATCATGATGAACACGGTGATGACTCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612563.1
ENST00000613102.5
ENST00000619573.1
ENST00000621686.2
ENST00000633235.1
ENST00000633649.1
CDS GCA 72 bp TCGTTCATGTGGACAGCACCGCAAGCCTTCATAAAGTaGAGCACAGTAGCCCTTTTCTTTGCTGCAGTCAAG +
Preference number: 6 (lower is better)
Translates to: SFMWTAPQAFIK*STVALFFAAVK
Trigger: CTTGACTGCAGCAAAGAAAAGGGCTACTGTGCTGCACTTTATGAAGGCTTGCGGTGCTGTCCACATGAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000613102.5
ENST00000617860.4
ENST00000618837.4
ENST00000619573.1
ENST00000621686.2
ENST00000632601.1
ENST00000633649.1
ENST00000633767.1
CDS GCA 72 bp GCCTACCGTGTTCATCATGATTACAAATGCCTTCAGTaGAGGCAACATCCGAACCCTCCCGAGAACCTGTTT +
Preference number: 6 (lower is better)
Translates to: AYRVHHDYKCLQ*RQHPNPPENLF
Trigger: AAACAGGTTCTCGGGAGGGTTCGGATGTTGCCTGCACTGAAGGCATTTGTAATCATGATGAACACGGTAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618837.4
ENST00000633767.1
CDS CAA 90 bp TTCTTTGCATCAGTCATGCAGCTTCTAGTTACAGACAGGACTCCCTaGGGCCCTACTGTTAGGGGTTCAAGAGCAGGATTTCCAGACTCT +
Preference number: 6 (lower is better)
Translates to: FFASVMQLLVTDRTP*GPTVRGSRAGFPDS
Trigger: AGAGTCTGGAAATCCTGCTCTTGAACCCCTAACAGTAGGGCCCAAGGGAGTCCTGTCTGTAACTAGAAGCTGCATGACTGATGCAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000613102.5
ENST00000616019.1
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633767.1
ENST00000633772.1
CDS GCA 72 bp CATCACCGTGTTCATCATGATTACAAATGCCTTCAGTaGAGGCAACATCCGAACCCTCCCGAGAACCTGTTT +
Preference number: 6 (lower is better)
Translates to: HHRVHHDYKCLQ*RQHPNPPENLF
Trigger: AAACAGGTTCTCGGGAGGGTTCGGATGTTGCCTGCACTGAAGGCATTTGTAATCATGATGAACACGGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612563.1
ENST00000613102.5
ENST00000619573.1
ENST00000621686.2
ENST00000633235.1
ENST00000633649.1
CDS GCA 72 bp CAAACCAAGGCAATGGCTGCCCACCCTTTTCAGAGCTaGAACAGCTTTCAGGATGTGTATCTTTGGTCTTGT +
Preference number: 6 (lower is better)
Translates to: QTKAMAAHPFQS*NSFQDVYLWSC
Trigger: ACAAGACCAAAGATACACATCCTGAAAGCTGTTGCAGCTCTGAAAAGGGTGGGCAGCCATTGCCTTGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS GCA 72 bp GGTACATTTTTCCTATGCTCAAACCAAGGCAATGGCTaGCCACCCTTTTCAGAGCTGCAACAGCTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: GTFFLCSNQGNG*PPFSELQQLSG
Trigger: TCCTGAAAGCTGTTGCAGCTCTGAAAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAATGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS CCA 72 bp CTGTGGTACATTTTTCCTATGCTCAAACCAAGGCAATaGCTGCCCACCCTTTTCAGAGCTGCAACAGCTTTC +
Preference number: 6 (lower is better)
Translates to: LWYIFPMLKPRQ*LPTLFRAATAF
Trigger: GAAAGCTGTTGCAGCTCTGAAAAGGGTGGGCAGCCATTGCCTTGGTTTGAGCATAGGAAAAATGTACCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS CAA 90 bp GATGAATTCCCAAGCAGGTCAGAACTTCTTCTTGAGCTATATCTATaGTCTTTGCATGCCTTTCTCTTCGCCCTCCTGCGAACTCTGGCT +
Preference number: 6 (lower is better)
Translates to: DEFPSRSELLLELYL*SLHAFLFALLRTLA
Trigger: AGCCAGAGTTCGCAGGAGGGCGAAGAGAAAGGCATGCAAAGACAATAGATATAGCTCAAGAAGAAGTTCTGACCTGCTTGGGAATTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000618837.4
ENST00000619573.1
ENST00000621686.2
ENST00000633649.1
ENST00000633767.1
CDS GCA 72 bp GGTCAGAACTTCTTCTTGAGCTATATCTATTGTCTTTaGATGCCTTTCTCTTCGCCCTCCTGCGAACTCTGG +
Preference number: 6 (lower is better)
Translates to: GQNFFLSYIYCL*MPFSSPSCELW
Trigger: CCAGAGTTCGCAGGAGGGCGAAGAGAAAGGCATGCAAAGACAATAGATATAGCTCAAGAAGAAGTTCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000618837.4
ENST00000619573.1
ENST00000621686.2
ENST00000633649.1
ENST00000633767.1
CDS GCA 72 bp CTTGTGACTCTACAGCTCCATTCAAATCTCTGCTATTaGCTGAGGGCCAGACCCATATCGAAAAGTGACAAG +
Preference number: 6 (lower is better)
Translates to: LVTLQLHSNLCY*LRARPISKSDK
Trigger: CTTGTCACTTTTCGATATGGGTCTGGCCCTCAGGCAATAGCAGAGATTTGAATGGAGCTGTAGAGTCACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619573.1
ENST00000633649.1
CDS CCA 72 bp GTCTGTTTCACAGCAAACATGTATGTGTCGTTCATGTaGACAGCACCGCAAGCCTTCATAAAGTGCAGCACA +
Preference number: 6 (lower is better)
Translates to: VCFTANMYVSFM*TAPQAFIKCST
Trigger: TGTGCTGCACTTTATGAAGGCTTGCGGTGCTGTCCACATGAACGACACATACATGTTTGCTGTGAAACAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000613102.5
ENST00000617860.4
ENST00000618837.4
ENST00000619573.1
ENST00000621686.2
ENST00000632601.1
ENST00000633649.1
ENST00000633767.1
CDS CCA 72 bp CTAGCAAATTACATACTCATACCCTCCTGCGAACTCTaGCTCAGCACGACCCAAAAGATGTGCAATGAAGTC +
Preference number: 6 (lower is better)
Translates to: LANYILIPSCEL*LSTTQKMCNEV
Trigger: GACTTCATTGCACATCTTTTGGGTCGTGCTGAGCCAGAGTTCGCAGGAGGGTATGAGTATGTAATTTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617860.4
ENST00000632601.1
CDS TCA 72 bp CGAACTCTGGCTCAGCACGACCCAAAAGATGTGCAATaGAGTCTGTTTCACAGCAAACATGTATGTGTCGTT +
Preference number: 6 (lower is better)
Translates to: RTLAQHDPKDVQ*SLFHSKHVCVV
Trigger: AACGACACATACATGTTTGCTGTGAAACAGACTTCATTGCACATCTTTTGGGTCGTGCTGAGCCAGAGTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000613102.5
ENST00000617860.4
ENST00000618837.4
ENST00000619573.1
ENST00000621686.2
ENST00000632601.1
ENST00000633649.1
ENST00000633767.1
CDS TCA 72 bp CTCCCGAGAACCTGTTTCACTCCCTTCCATGCTAGATaGATATCCACAATCACTACCATTACAGTGTGGAGA +
Preference number: 6 (lower is better)
Translates to: LPRTCFTPFHAR*ISTITTITVWR
Trigger: TCTCCACACTGTAATGGTAGTGATTGTGGATATTCATCTAGCATGGAAGGGAGTGAAACAGGTTCTCGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000618837.4
ENST00000619573.1
ENST00000621686.2
ENST00000633649.1
ENST00000633767.1
CDS TCA 72 bp CTTGTCACGGTGAAACACTGTGTGCATGGTATTTCCTaGGGTCTCTCGATTACCTGGATCTGTAATACAGCT +
Preference number: 6 (lower is better)
Translates to: LVTVKHCVHGIS*GLSITWICNTA
Trigger: AGCTGTATTACAGATCCAGGTAATCGAGAGACCTCAGGAAATACCATGCACACAGTGTTTCACCGTGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS TCA 72 bp CAGCTTTCAGGATGTGTATCTTTGGTCTTGTCACGGTaGAACACTGTGTGCATGGTATTTCCTGAGGTCTCT +
Preference number: 6 (lower is better)
Translates to: QLSGCVSLVLSR*NTVCMVFPEVS
Trigger: AGAGACCTCAGGAAATACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATACACATCCTGAAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS TCA 72 bp AGCCTGCCTCCCTTCAAGCAAGAACTAGCAGAGGACTaGACCAAACACCAGAGAACAGTTTTTCCCTATTTT +
Preference number: 6 (lower is better)
Translates to: SLPPFKQELAED*TKHQRTVFPYF
Trigger: AAAATAGGGAAAAACTGTTCTCTGGTGTTTGGTTCAGTCCTCTGCTAGTTCTTGCTTGAAGGGAGGCAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617860.4
ENST00000632601.1
CDS CCA 72 bp TATCTTTGGTCTTGTCACGGTGAAACACTGTGTGCATaGTATTTCCTGAGGTCTCTCGATTACCTGGATCTG +
Preference number: 6 (lower is better)
Translates to: YLWSCHGETLCA*YFLRSLDYLDL
Trigger: CAGATCCAGGTAATCGAGAGACCTCAGGAAATACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS CAA 72 bp GTACATTCAGACTCATCAAGGAGTTCAACTAAGCTCTaGGCACCTTTTCCGGAATCGGGACCAAACAACGTT +
Preference number: 6 (lower is better)
Translates to: VHSDSSRSSTKL*APFPESGPNNV
Trigger: AACGTTGTTTGGTCCCGATTCCGGAAAAGGTGCCAAGAGCTTAGTTGAACTCCTTGATGAGTCTGAATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613102.5
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
CDS CAA 72 bp CCACATGGAATACTTACAAGGAGTTCAACTAAGCTCTaGGCACCTTTTCCGGAATCGGGACCAAACAACGTT +
Preference number: 6 (lower is better)
Translates to: PHGILTRSSTKL*APFPESGPNNV
Trigger: AACGTTGTTTGGTCCCGATTCCGGAAAAGGTGCCAAGAGCTTAGTTGAACTCCTTGTAAGTATTCCATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS CAA 90 bp ACAGTAAGACCACATGGAATACTTACAAGGAGTTCAACTAAGCTCTaGGCACCTTTTCCGGAATCGGGACCAAACAACGTTTCTGTAGGT +
Preference number: 6 (lower is better)
Translates to: TVRPHGILTRSSTKL*APFPESGPNNVSVG
Trigger: ACCTACAGAAACGTTGTTTGGTCCCGATTCCGGAAAAGGTGCCAAGAGCTTAGTTGAACTCCTTGTAAGTATTCCATGTGGTCTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS GCA 72 bp TCCGGAATCGGGACCAAACAACGTTTCTGTAGGTTCTaGAAACTGTGGTACATTTTTCCTATGCTCAAACCA +
Preference number: 6 (lower is better)
Translates to: SGIGTKQRFCRF*KLWYIFPMLKP
Trigger: TGGTTTGAGCATAGGAAAAATGTACCACAGTTTGCAGAACCTACAGAAACGTTGTTTGGTCCCGATTCCGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS CCA 72 bp TTTCAGAGCTGCAACAGCTTTCAGGATGTGTATCTTTaGTCTTGTCACGGTGAAACACTGTGTGCATGGTAT +
Preference number: 6 (lower is better)
Translates to: FQSCNSFQDVYL*SCHGETLCAWY
Trigger: ATACCATGCACACAGTGTTTCACCGTGACAAGACCAAAGATACACATCCTGAAAGCTGTTGCAGCTCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS CCA 72 bp GGGACCAAACAACGTTTCTGTAGGTTCTGCAAACTGTaGTACATTTTTCCTATGCTCAAACCAAGGCAATGG +
Preference number: 6 (lower is better)
Translates to: GTKQRFCRFCKL*YIFPMLKPRQW
Trigger: CCATTGCCTTGGTTTGAGCATAGGAAAAATGTACCACAGTTTGCAGAACCTACAGAAACGTTGTTTGGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000615952.1
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
ENST00000632761.1
CDS CCA 72 bp TACATTCAGACTCATCAAGGAGTTCAACTAAGCTCTTaGCACCTTTTCCGGAATCGGGACCAAACAACGTTT +
Preference number: 6 (lower is better)
Translates to: YIQTHQGVQLSS*HLFRNRDQTTF
Trigger: AAACGTTGTTTGGTCCCGATTCCGGAAAAGGTGCCAAGAGCTTAGTTGAACTCCTTGATGAGTCTGAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613102.5
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
CDS CCA 72 bp AATTTGCTCCAGCCGTTGTCAACCAGCCACTACAAATaGGCCTCTTGTGATCATTTAACCGGCAGTATTTAT +
Preference number: 6 (lower is better)
Translates to: NLLQPLSTSHYK*ASCDHLTGSIY
Trigger: ATAAATACTGCCGGTTAAATGATCACAAGAGGCCCATTTGTAGTGGCTGGTTGACAACGGCTGGAGCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613102.5
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
CDS CCA 72 bp CACATGGAATACTTACAAGGAGTTCAACTAAGCTCTTaGCACCTTTTCCGGAATCGGGACCAAACAACGTTT +
Preference number: 6 (lower is better)
Translates to: HMEYLQGVQLSS*HLFRNRDQTTF
Trigger: AAACGTTGTTTGGTCCCGATTCCGGAAAAGGTGCCAAGAGCTTAGTTGAACTCCTTGTAAGTATTCCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615952.1
ENST00000632761.1
CDS CAA 72 bp ACCATTTTACATCAGGGACTTGCACATCTGCAGATTTaGGTATCTACAGGAAGTCCTGGAATCAAACCCCAC +
Preference number: 6 (lower is better)
Translates to: TILHQGLAHLQI*VSTGSPGIKPH
Trigger: GTGGGGTTTGATTCCAGGACTTCCTGTAGATACCAAAATCTGCAGATGTGCAAGTCCCTGATGTAAAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617860.4
ENST00000632601.1
CDS TCA 72 bp GCCGTTGTCAACCAGCCACTACAAATGGGCCTCTTGTaGTCATTTAACCGGCAGTATTTATTAAATTTCTCC +
Preference number: 6 (lower is better)
Translates to: AVVNQPLQMGLL*SFNRQYLLNFS
Trigger: GGAGAAATTTAATAAATACTGCCGGTTAAATGATCACAAGAGGCCCATTTGTAGTGGCTGGTTGACAACGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613102.5
ENST00000620927.1
ENST00000621686.2
ENST00000632104.1
CDS GCA 72 bp CTCGAGTCAATTAAAACTACTTCATCCCTGCATTCCTaGGACATTAGTTCCCATACATCCATCCAACAACCT +
Preference number: 6 (lower is better)
Translates to: LESIKTTSSLHS*DISSHTSIQQP
Trigger: AGGTTGTTGGATGGATGTATGGGAACTAATGTCGCAGGAATGCAGGGATGAAGTAGTTTTAATTGACTCGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613102.5
ENST00000617860.4
ENST00000618837.4
ENST00000621686.2
ENST00000632601.1
ENST00000633767.1
CDS CAA 90 bp GTGCATAGACTATATGCAAATATTACACCATTTTACATCAGGGACTaGCACATCTGCAGATTTTGGTATCTACAGGAAGTCCTGGAATCA +
Preference number: 6 (lower is better)
Translates to: VHRLYANITPFYIRD*HICRFWYLQEVLES
Trigger: TGATTCCAGGACTTCCTGTAGATACCAAAATCTGCAGATGTGCAAGTCCCTGATGTAAAATGGTGTAATATTTGCATATAGTCTATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617860.4
ENST00000632601.1
CDS GCA 72 bp AATATTACACCATTTTACATCAGGGACTTGCACATCTaGAGATTTTGGTATCTACAGGAAGTCCTGGAATCA +
Preference number: 6 (lower is better)
Translates to: NITPFYIRDLHI*RFWYLQEVLES
Trigger: TGATTCCAGGACTTCCTGTAGATACCAAAATCTGCAGATGTGCAAGTCCCTGATGTAAAATGGTGTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617860.4
ENST00000632601.1
CDS TCA 72 bp CTTTTCTTGCTTGAGTTCTCTTACTCGTTCCTCTTCTaGAAATTCCTCACAAAGTTGTTCCAATCTGCTAAT +
Preference number: 6 (lower is better)
Translates to: LFLLEFSYSFLF*KFLTKLFQSAN
Trigger: ATTAGCAGATTGGAACAACTTTGTGAGGAATTTTCAGAAGAGGAACGAGTAAGAGAACTCAAGCAAGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000613102.5
ENST00000617860.4
ENST00000618837.4
ENST00000619573.1
ENST00000621686.2
ENST00000632601.1
ENST00000633649.1
ENST00000633767.1
CDS GCA 72 bp GGTCAGAACTTCTTCTTGAGCTATATCTATTGTCTTTaGATGCCTTTCTCTTCGCCTATAAAAGGGAATAAT +
Preference number: 6 (lower is better)
Translates to: GQNFFLSYIYCL*MPFSSPIKGNN
Trigger: ATTATTCCCTTTTATAGGCGAAGAGAAAGGCATGCAAAGACAATAGATATAGCTCAAGAAGAAGTTCTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617860.4
ENST00000632601.1
CDS GCA 72 bp TATATGCAAATATTACACCATTTTACATCAGGGACTTaGACATCTGCAGATTTTGGTATCTACAGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: YMQILHHFTSGT*TSADFGIYRKS
Trigger: GGACTTCCTGTAGATACCAAAATCTGCAGATGTGCAAGTCCCTGATGTAAAATGGTGTAATATTTGCATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617860.4
ENST00000632601.1
CDS CAA 72 bp CTATATGCAAATATTACACCATTTTACATCAGGGACTaGCACATCTGCAGATTTTGGTATCTACAGGAAGTC +
Preference number: 6 (lower is better)
Translates to: LYANITPFYIRD*HICRFWYLQEV
Trigger: GACTTCCTGTAGATACCAAAATCTGCAGATGTGCAAGTCCCTGATGTAAAATGGTGTAATATTTGCATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617860.4
ENST00000632601.1