RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GGACT (Homo sapiens)

Ensembl gene IDs: ENSG00000134864

Ensembl transcript IDs: ENST00000376250.6, ENST00000455100.2, ENST00000464500.5, ENST00000467518.5, ENST00000471912.1, ENST00000492399.5, ENST00000683975.1

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTGGAAAGGGCCCTGTTCGGCTTCCGCCTTCACCCAGCATGGGCTaGGCGCATCTTGGAGCCCCAGGGCTCTCAAACCTAGGCCCACCC +
Preference number: 1 (lower is better)
Translates to: IGKGPVRLPPSPSMG*AHLGAPGLSNLGPP
Trigger: GGGTGGGCCTAGGTTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGAAGGCGGAAGCCGAACAGGGCCCTTTCCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 90 bp CTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCACAAGGAGCTTaGGCTGCCTCACCGCCCTCATCAAGCACAGGGCCGCCACGAGCT +
Preference number: 1 (lower is better)
Translates to: LVPSPLHKPGQSQGA*AASPPSSSTGPPRA
Trigger: AGCTCGTGGCGGCCCTGTGCTTGATGAGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR GCA 90 bp CCCTTCCCCATTGCACAAGCCAGGGCAGTCACAAGGAGCTTGGGCTaGCTCACCGCCCTCATCAAGCACAGGGCCGCCACGAGCTCATCA +
Preference number: 1 (lower is better)
Translates to: PFPIAQARAVTRSLG*LTALIKHRAATSSS
Trigger: TGATGAGCTCGTGGCGGCCCTGTGCTTGATGAGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 90 bp TGCTCTCCCTTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTaGGCTCAGATAAACTTCCACTTGAAGTCCGGGCGCTCAGCTGTG +
Preference number: 1 (lower is better)
Translates to: CSPFRGQGRGLATEI*AQINFHLKSGRSAV
Trigger: CACAGCTGAGCGCCCGGACTTCAAGTGGAAGTTTATCTGAGCCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAAGGGAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR GCA 90 bp TTTGTTTGTTTTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTaGACAAGCCAGGGCAGTCACAAGGAGCTTGGGCTGCCTCACCGC +
Preference number: 1 (lower is better)
Translates to: FVCFEDERAAWSLPH*TSQGSHKELGLPHR
Trigger: GCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAAAACAAACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 90 bp TGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTaGCTGACTCCCCTGGAGGTCACCCTGAAGCTTCCTGGTTGGCCG +
Preference number: 1 (lower is better)
Translates to: WQSLSCCVSMWVYCW*LTPLEVTLKLPGWP
Trigger: CGGCCAACCAGGAAGCTTCAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 90 bp AAATCAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTaGAAAGGGCCCTGTTCGGCTTCCGCCTTCACCCAGCATGGGCTG +
Preference number: 1 (lower is better)
Translates to: KSAATERLVPFRQIH*KGPCSASAFTQHGL
Trigger: CAGCCCATGCTGGGTGAAGGCGGAAGCCGAACAGGGCCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTaGTGGCTGACTCCCCTGGAGGTCACCCTGAAGCTTCCTGGTTGG +
Preference number: 1 (lower is better)
Translates to: FWQSLSCCVSMWVYC*WLTPLEVTLKLPGW
Trigger: CCAACCAGGAAGCTTCAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 90 bp TGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTaGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGAAG +
Preference number: 1 (lower is better)
Translates to: CKCRFWQSLSCCVSM*VYCWWLTPLEVTLK
Trigger: CTTCAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR GCA 90 bp CTAAGGACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTaGTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTG +
Preference number: 1 (lower is better)
Translates to: LRTRDCKCRFWQSLS*CVSMWVYCWWLTPL
Trigger: CAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGTCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR TCA 90 bp TCTGTCAGGCCTGAAGAACAAATTACTAATGCATTGGCTCTTCTTTaGAAGGACTCACCCCCAAATGCTCTCCCTTCAGGGGGCAGGGAC +
Preference number: 1 (lower is better)
Translates to: SVRPEEQITNALALL*KDSPPNALPSGGRD
Trigger: GTCCCTGCCCCCTGAAGGGAGAGCATTTGGGGGTGAGTCCTTTCAAAGAAGAGCCAATGCATTAGTAATTTGTTCTTCAGGCCTGACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR TCA 90 bp TTTCAGACTTTGCTGGGAAGCAGAAGCAAGAGCCGTGCACCGAGTTaGATCGATGCTGACAATTATCAGATGGAGGTGGGTAGTAATTGG +
Preference number: 1 (lower is better)
Translates to: FQTLLGSRSKSRAPS*IDADNYQMEVGSNW
Trigger: CCAATTACTACCCACCTCCATCTGATAATTGTCAGCATCGATTCAACTCGGTGCACGGCTCTTGCTTCTGCTTCCCAGCAAAGTCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 90 bp GAAGCTAAGCTTCTGTCAGGCCTGAAGAACAAATTACTAATGCATTaGCTCTTCTTTGAAAGGACTCACCCCCAAATGCTCTCCCTTCAG +
Preference number: 1 (lower is better)
Translates to: EAKLLSGLKNKLLMH*LFFERTHPQMLSLQ
Trigger: CTGAAGGGAGAGCATTTGGGGGTGAGTCCTTTCAAAGAAGAGCCAATGCATTAGTAATTTGTTCTTCAGGCCTGACAGAAGCTTAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 90 bp AACTTCCACTTGAAGTCCGGGCGCTCAGCTGTGTCTACCAGCAAGTaGGTGTTCATTATTTTGCTAGATCAGAATGTAAAGAACCTTCTA +
Preference number: 1 (lower is better)
Translates to: NFHLKSGRSAVSTSK*VFIILLDQNVKNLL
Trigger: TAGAAGGTTCTTTACATTCTGATCTAGCAAAATAATGAACACCCACTTGCTGGTAGACACAGCTGAGCGCCCGGACTTCAAGTGGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 90 bp GCAAGAGCCGTGCACCGAGTTGAATCGATGCTGACAATTATCAGATaGAGGTGGGTAGTAATTGGTACTTCGTGCCTTGCTAAAATTATT +
Preference number: 1 (lower is better)
Translates to: ARAVHRVESMLTIIR*RWVVIGTSCLAKII
Trigger: AATAATTTTAGCAAGGCACGAAGTACCAATTACTACCCACCTCCATCTGATAATTGTCAGCATCGATTCAACTCGGTGCACGGCTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR TCA 90 bp CCTTGCTATTCGTATCTCAACATTATTTGTAAAATCAGCTGCCACTaGAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGCCCTG +
Preference number: 1 (lower is better)
Translates to: PCYSYLNIICKISCH*KIGSFPADSLERAL
Trigger: CAGGGCCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTGATTTTACAAATAATGTTGAGATACGAATAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 90 bp AAGAATGGTGCTATACGCACTCTGATATACAGCATGCTTGCCCTGTaGATCTTTTCTACAAATTCTACCCAGCCGTGTAAAATCGGCTTT +
Preference number: 1 (lower is better)
Translates to: KNGAIRTLIYSMLAL*IFSTNSTQPCKIGF
Trigger: AAAGCCGATTTTACACGGCTGGGTAGAATTTGTAGAAAAGATCCACAGGGCAAGCATGCTGTATATCAGAGTGCGTATAGCACCATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 90 bp GCCGTGCACCGAGTTGAATCGATGCTGACAATTATCAGATGGAGGTaGGTAGTAATTGGTACTTCGTGCCTTGCTAAAATTATTTTAAGT +
Preference number: 1 (lower is better)
Translates to: AVHRVESMLTIIRWR*VVIGTSCLAKIILS
Trigger: ACTTAAAATAATTTTAGCAAGGCACGAAGTACCAATTACTACCCACCTCCATCTGATAATTGTCAGCATCGATTCAACTCGGTGCACGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CAA 90 bp CCTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCACAAGGAGCTaGGGCTGCCTCACCGCCCTCATCAAGCACAGGGCCGCCACGAGC +
Preference number: 2 (lower is better)
Translates to: PGPFPIAQARAVTRS*GCLTALIKHRAATS
Trigger: GCTCGTGGCGGCCCTGTGCTTGATGAGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR GCA 90 bp TTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCACAAGGAGCTTGGGCTaGCTCACCGCCCTCATCAAG +
Preference number: 2 (lower is better)
Translates to: LRMSALPGPFPIAQARAVTRSLG*LTALIK
Trigger: CTTGATGAGGGCGGTGAGGCAGCCCAAGCTCCTTGT...GACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR GCA 90 bp TGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGGGACTCACCCCCAAATaGTCTCCCTTCAGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: CVSMWVYCWWLTPLEVTLGLTPK*SPFRGQ
Trigger: CTGCCCCCTGAAGGGAGAGCATTTGGGGGTGAGTCC...CAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp TCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGAAGCTTTCACCCAGCATGGGCTaGGCGCATCTTGGAGCCCCA +
Preference number: 2 (lower is better)
Translates to: SMWVYCWWLTPLEVTLKLSPSMG*AHLGAP
Trigger: TGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGA...AAGCTTCAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CAA 90 bp GGACGGGGTCTGGCTACTGAGATCTGGGCTCAGATAAACTTCCACTaGAAGTCCGGGCGCTCAGCTGTGTCTACCAGCAAGTGGGTGTTC +
Preference number: 2 (lower is better)
Translates to: GRGLATEIWAQINFH*KSGRSAVSTSKWVF
Trigger: GAACACCCACTTGCTGGTAGACACAGCTGAGCGCCCGGACTTCAAGTGGAAGTTTATCTGAGCCCAGATCTCAGTAGCCAGACCCCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR TCA 90 bp CCCCATTGCACAAGCCAGGGCAGTCACAAGGAGCTTGGGCTGCCTCACCGCCCTAGTCTGCCATTAAGTTaGAGAGTAAGTGAGCTCTCC +
Preference number: 2 (lower is better)
Translates to: PHCTSQGSHKELGLPHRPSLPLS*RVSELS
Trigger: GGAGAGCTCACTTACTCTTCAACTTAATGGCAGACT...AGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp CAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGCCCTGGGCTGGGCGCATCTTaGAGCCCCAGGGCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: QLPLKDWFLSGRFIGKGPGLGAS*SPRALK
Trigger: TTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCC...AGGGCCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR TCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTCCCTGGAGGTCACCCTaGAGCTTCCTGGTTGGCCGG +
Preference number: 2 (lower is better)
Translates to: HLIALLLLEVRPSLLVLIPWRSP*SFLVGR
Trigger: CCGGCCAACCAGGAAGCTTCAGGGTGACCTCCAGGG...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR GCA 90 bp CCCCATTGCACAAGCCAGGGCAGTCACAAGGAGCTTGGGCTGCCTCACCGCCCTGATATACAGCATGCTTaGCCTGTGGATCTTTTCTAC +
Preference number: 2 (lower is better)
Translates to: PHCTSQGSHKELGLPHRPDIQHA*PVDLFY
Trigger: GTAGAAAAGATCCACAGGGCAAGCATGCTGTATATC...AGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR GCA 90 bp TCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGAAGCTTCTGGTTGGCCGGGGGTaGTGTCTCCACTGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: SMWVYCWWLTPLEVTLKLLVGRG*CLHCFC
Trigger: ACAAAAACAGTGGAGACAGCACCCCCGGCCAACCAG...AAGCTTCAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp GGACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTAGGGCTGGGCGCATCTTaGAGCCCCAGGGCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: GPETANADFGNPFPAVSLGLGAS*SPRALK
Trigger: TTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCC...TAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp TCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGAAGCTTTTCCGGCAGATTCATTaGAAAGGGCCCTGTTCGGCT +
Preference number: 2 (lower is better)
Translates to: SMWVYCWWLTPLEVTLKLFRQIH*KGPCSA
Trigger: AGCCGAACAGGGCCCTTTCCAATGAATCTGCCGGAA...AAGCTTCAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp GTAAGTGAGCTCTCCCAACAGAGAATGAGGTTACTAAAGATCACAGCAGCTGCATCACCCAGCATGGGCTaGGCGCATCTTGGAGCCCCA +
Preference number: 2 (lower is better)
Translates to: VSELSQQRMRLLKITAAASPSMG*AHLGAP
Trigger: TGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGA...TGCAGCTGCTGTGATCTTTAGTAACCTCATTCTCTGTTGGGAGAGCTCACTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp TTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCAGCATGCTTGCCCTGTaGATCTTTTCTACAAATTCT +
Preference number: 2 (lower is better)
Translates to: LRMSALPGPFPIAQARAVSMLAL*IFSTNS
Trigger: AGAATTTGTAGAAAAGATCCACAGGGCAAGCATGCT...GACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp GTAAGTGAGCTCTCCCAACAGAGAATGAGGTTACTAAAGATCACAGCAGCTGCAGGCAGGGACGGGGTCTaGCTACTGAGATCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: VSELSQQRMRLLKITAAAGRDGV*LLRSGL
Trigger: GAGCCCAGATCTCAGTAGCCAGACCCCGTCCCTGCC...TGCAGCTGCTGTGATCTTTAGTAACCTCATTCTCTGTTGGGAGAGCTCACTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp TGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGGATGAGCGCGCTGCCTaGTCCCTTCCCCATTGCACA +
Preference number: 2 (lower is better)
Translates to: CRFWQSLSCCVSMWVYCWDERAA*SLPHCT
Trigger: TGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATC...CCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGGATGAGCGCGCTGCCTaGTCCCTTCCCCATTGCACA +
Preference number: 2 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMDERAA*SLPHCT
Trigger: TGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATC...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR GCA 90 bp TGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGCAGAAGCAAGAGCCGTaGACCGAGTTGAATCGATGC +
Preference number: 2 (lower is better)
Translates to: CRFWQSLSCCVSMWVYCWQKQEP*TELNRC
Trigger: GCATCGATTCAACTCGGTGCACGGCTCTTGCTTCTG...CCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp TGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGAGTGCTGTTTGTATTTaGAAGCTAAGCTTCTGTCAG +
Preference number: 2 (lower is better)
Translates to: CVSMWVYCWWLTPLEVTLSAVCI*KLSFCQ
Trigger: CTGACAGAAGCTTAGCTTCCAAATACAAACAGCACT...CAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR TCA 90 bp AGAAGTGAGGCCCTCACTCCTGGTGCTGATTTTCAAAACTTCCTAAGGACCAGAGTGCTATACGCACTCTaGTATACAGCATGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: RSEALTPGADFQNFLRTRVLYAL*YTACLP
Trigger: GGGCAAGCATGCTGTATATCAGAGTGCGTATAGCAC...TCTGGTCCTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGGGCCTCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR TCA 90 bp TACGTTTACGTCGTCATTTATTCCACAGAGTCAAGACCAATATTCTGCCAAAAACCCTGGAGGTCACCCTaGAGCTTCCTGGTTGGCCGG +
Preference number: 2 (lower is better)
Translates to: YVYVVIYSTESRPIFCQKPWRSP*SFLVGR
Trigger: CCGGCCAACCAGGAAGCTTCAGGGTGACCTCCAGGG...TTTTTGGCAGAATATTGGTCTTGACTCTGTGGAATAAATGACGACGTAAACGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR GCA 90 bp TCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGAAGCTTATACATTTCAGACTTTaGTGGGAAGCAGAAGCAAGA +
Preference number: 2 (lower is better)
Translates to: SMWVYCWWLTPLEVTLKLIHFRL*WEAEAR
Trigger: TCTTGCTTCTGCTTCCCAGCAAAGTCTGAAATGTAT...AAGCTTCAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGCTGCCACTGAAAGATTaGTTCCTTTCCGGCAGATTC +
Preference number: 2 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMLPLKD*FLSGRF
Trigger: GAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAG...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR TCA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGAGTCTGCCATTAAGTTaGAGAGTAAGTGAGCTCTCC +
Preference number: 2 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMSLPLS*RVSELS
Trigger: GGAGAGCTCACTTACTCTTCAACTTAATGGCAGACT...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR GCA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGATGATCATGTTTTTGTaGCAGATGCAGTTAGCGATC +
Preference number: 2 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLMIMFL*QMQLAI
Trigger: GATCGCTAACTGCATCTGGCACAAAAACATGATCAT...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR GCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTCTAAGGACCAGAGACTaGAAATGCAGATTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: HLIALLLLEVRPSLLVLILRTRD*KCRFWQ
Trigger: TTGCCAAAATCTGCATTTGCAGTCTCTGGTCCTTAG...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGGTGTCTACCAGCAAGTaGGTGTTCATTATTTTGCTA +
Preference number: 2 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLVSTSK*VFIILL
Trigger: TAGCAAAATAATGAACACCCACTTGCTGGTAGACAC...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGCTGACAATTATCAGATaGAGGTGGGTAGTAATTGGT +
Preference number: 2 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLLTIIR*RWVVIG
Trigger: ACCAATTACTACCCACCTCCATCTGATAATTGTCAG...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR TCA 90 bp GTAAGTGAGCTCTCCCAACAGAGAATGAGGTTACTAAAGATCACAGCAGCTGCAGAGTTGAATCGATGCTaGCAATTATCAGATGGAGGT +
Preference number: 2 (lower is better)
Translates to: VSELSQQRMRLLKITAAAELNRC*QLSDGG
Trigger: ACCTCCATCTGATAATTGTCAGCATCGATTCAACTC...TGCAGCTGCTGTGATCTTTAGTAACCTCATTCTCTGTTGGGAGAGCTCACTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp AGAAGTGAGGCCCTCACTCCTGGTGCTGATTTTCAAAACTTCCTAAGGACCAGAGTGTCTACCAGCAAGTaGGTGTTCATTATTTTGCTA +
Preference number: 2 (lower is better)
Translates to: RSEALTPGADFQNFLRTRVSTSK*VFIILL
Trigger: TAGCAAAATAATGAACACCCACTTGCTGGTAGACAC...TCTGGTCCTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGGGCCTCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CAA 90 bp ATTCGTATCTCAACATTATTTGTAAAATCAGCTGCCACTGAAAGATaGGTTCCTTTCCGGCAGATTCATTGGAAAGGGCCCTGTTCGGCT +
Preference number: 2 (lower is better)
Translates to: IRISTLFVKSAATER*VPFRQIHWKGPCSA
Trigger: AGCCGAACAGGGCCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTGATTTTACAAATAATGTTGAGATACGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR GCA 90 bp TACGTTTACGTCGTCATTTATTCCACAGAGTCAAGACCAATATTCTGCCAAAAACAGAAGCAAGAGCCGTaGACCGAGTTGAATCGATGC +
Preference number: 2 (lower is better)
Translates to: YVYVVIYSTESRPIFCQKQKQEP*TELNRC
Trigger: GCATCGATTCAACTCGGTGCACGGCTCTTGCTTCTG...TTTTTGGCAGAATATTGGTCTTGACTCTGTGGAATAAATGACGACGTAAACGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGATTATCAGATGGAGGTaGGTAGTAATTGGTACTTCG +
Preference number: 2 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMIIRWR*VVIGTS
Trigger: CGAAGTACCAATTACTACCCACCTCCATCTGATAAT...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp GTAAGTGAGCTCTCCCAACAGAGAATGAGGTTACTAAAGATCACAGCAGCTGCACTGACAATTATCAGATaGAGGTGGGTAGTAATTGGT +
Preference number: 2 (lower is better)
Translates to: VSELSQQRMRLLKITAAALTIIR*RWVVIG
Trigger: ACCAATTACTACCCACCTCCATCTGATAATTGTCAG...TGCAGCTGCTGTGATCTTTAGTAACCTCATTCTCTGTTGGGAGAGCTCACTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR TCA 90 bp ATCAGATGGAGGTGGGTAGTAATTGGTACTTCGTGCCTTGCTAAAATTATTTTAGTGCTATACGCACTCTaGTATACAGCATGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: IRWRWVVIGTSCLAKIILVLYAL*YTACLP
Trigger: GGGCAAGCATGCTGTATATCAGAGTGCGTATAGCAC...TAAAATAATTTTAGCAAGGCACGAAGTACCAATTACTACCCACCTCCATCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR TCA 90 bp ACCTTTCAGTCATCACCCAATTTAATTAGCCATTTGCATGATGCTTTCACACACGCATTGGCTCTTCTTTaGAAGGACTCACCCCCAAAT +
Preference number: 2 (lower is better)
Translates to: TFQSSPNLISHLHDAFTHALALL*KDSPPN
Trigger: ATTTGGGGGTGAGTCCTTTCAAAGAAGAGCCAATGC...GTGTGTGAAAGCATCATGCAAATGGCTAATTAAATTGGGTGATGACTGAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455100.2
3UTR-3UTR CCA 90 bp ACCTTTCAGTCATCACCCAATTTAATTAGCCATTTGCATGATGCTTTCACACACCTGGCTACTGAGATCTaGGCTCAGATAAACTTCCAC +
Preference number: 2 (lower is better)
Translates to: TFQSSPNLISHLHDAFTHLATEI*AQINFH
Trigger: GTGGAAGTTTATCTGAGCCCAGATCTCAGTAGCCAG...GTGTGTGAAAGCATCATGCAAATGGCTAATTAAATTGGGTGATGACTGAAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455100.2
3UTR-3UTR TCA 90 bp TACGTTTACGTCGTCATTTATTCCACAGAGTCAAGACCAATATTCTGCCAAAAAAGCCGTGCACCGAGTTaGATCGATGCTGACAATTAT +
Preference number: 2 (lower is better)
Translates to: YVYVVIYSTESRPIFCQKSRAPS*IDADNY
Trigger: ATAATTGTCAGCATCGATTCAACTCGGTGCACGGCT...TTTTTGGCAGAATATTGGTCTTGACTCTGTGGAATAAATGACGACGTAAACGTA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp ATCAGATGGAGGTGGGTAGTAATTGGTACTTCGTGCCTTGCTAAAATTATTTTACTGCCACTGAAAGATTaGTTCCTTTCCGGCAGATTC +
Preference number: 2 (lower is better)
Translates to: IRWRWVVIGTSCLAKIILLPLKD*FLSGRF
Trigger: GAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAG...TAAAATAATTTTAGCAAGGCACGAAGTACCAATTACTACCCACCTCCATCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR TCA 90 bp TACGTTTACGTCGTCATTTATTCCACAGAGTCAAGACCAATATTCTGCCAAAAACCTCACTCCTGGTGCTaGTTTTCAAAACTTCCTAAG +
Preference number: 2 (lower is better)
Translates to: YVYVVIYSTESRPIFCQKPHSWC*FSKLPK
Trigger: CTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGG...TTTTTGGCAGAATATTGGTCTTGACTCTGTGGAATAAATGACGACGTAAACGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR GCA 90 bp ATCAGATGGAGGTGGGTAGTAATTGGTACTTCGTGCCTTGCTAAAATTATTTTAGGGAGGGAAGCACCTTaGTATTCGTATCTCAACATT +
Preference number: 2 (lower is better)
Translates to: IRWRWVVIGTSCLAKIILGREAP*YSYLNI
Trigger: AATGTTGAGATACGAATAGCAAGGTGCTTCCCTCCC...TAAAATAATTTTAGCAAGGCACGAAGTACCAATTACTACCCACCTCCATCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR GCA 90 bp ACCTTTCAGTCATCACCCAATTTAATTAGCCATTTGCATGATGCTTTCACACACACCAGAGACTGCAAATaGAGATTTTGGCAATCCCTT +
Preference number: 2 (lower is better)
Translates to: TFQSSPNLISHLHDAFTHTRDCK*RFWQSL
Trigger: AAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT...GTGTGTGAAAGCATCATGCAAATGGCTAATTAAATTGGGTGATGACTGAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455100.2
3UTR-3UTR GCA 90 bp TACGTTTACGTCGTCATTTATTCCACAGAGTCAAGACCAATATTCTGCCAAAAAATGATCATGTTTTTGTaGCAGATGCAGTTAGCGATC +
Preference number: 2 (lower is better)
Translates to: YVYVVIYSTESRPIFCQKMIMFL*QMQLAI
Trigger: GATCGCTAACTGCATCTGGCACAAAAACATGATCAT...TTTTTGGCAGAATATTGGTCTTGACTCTGTGGAATAAATGACGACGTAAACGTA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CCA 90 bp TACGTTTACGTCGTCATTTATTCCACAGAGTCAAGACCAATATTCTGCCAAAAAAGCATGCTTGCCCTGTaGATCTTTTCTACAAATTCT +
Preference number: 2 (lower is better)
Translates to: YVYVVIYSTESRPIFCQKSMLAL*IFSTNS
Trigger: AGAATTTGTAGAAAAGATCCACAGGGCAAGCATGCT...TTTTTGGCAGAATATTGGTCTTGACTCTGTGGAATAAATGACGACGTAAACGTA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 72 bp GGCCCTGTTCGGCTTCCGCCTTCACCCAGCATGGGCTaGGCGCATCTTGGAGCCCCAGGGCTCTCAAACCTA +
Preference number: 3 (lower is better)
Translates to: GPVRLPPSPSMG*AHLGAPGLSNL
Trigger: TAGGTTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGAAGGCGGAAGCCGAACAGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR GCA 72 bp ATTGCACAAGCCAGGGCAGTCACAAGGAGCTTGGGCTaGCTCACCGCCCTCATCAAGCACAGGGCCGCCACG +
Preference number: 3 (lower is better)
Translates to: IAQARAVTRSLG*LTALIKHRAAT
Trigger: CGTGGCGGCCCTGTGCTTGATGAGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 72 bp TCCCCATTGCACAAGCCAGGGCAGTCACAAGGAGCTTaGGCTGCCTCACCGCCCTCATCAAGCACAGGGCCG +
Preference number: 3 (lower is better)
Translates to: SPLHKPGQSQGA*AASPPSSSTGP
Trigger: CGGCCCTGTGCTTGATGAGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR GCA 72 bp TTTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTaGACAAGCCAGGGCAGTCACAAGGAGCTTGGGCTG +
Preference number: 3 (lower is better)
Translates to: FEDERAAWSLPH*TSQGSHKELGL
Trigger: CAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 72 bp TTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTaGGCTCAGATAAACTTCCACTTGAAGTCCGGGCGC +
Preference number: 3 (lower is better)
Translates to: FRGQGRGLATEI*AQINFHLKSGR
Trigger: GCGCCCGGACTTCAAGTGGAAGTTTATCTGAGCCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CAA 90 bp CCAAATGCTCTCCCTTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTGGGGCTGCCACTGAAAGATaGGTTCCTTTCCGGCAGATT +
Preference number: 3 (lower is better)
Translates to: PNALPSGGRDGVWLLRSGAATER*VPFRQI
Trigger: AATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGC...CCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAAGGGAGAGCATTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CAA 90 bp TTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCTGGGAGGGAAGCACCTaGCTATTCGTATCTCAACAT +
Preference number: 3 (lower is better)
Translates to: LRMSALPGPFPIAQARAVWEGST*LFVSQH
Trigger: ATGTTGAGATACGAATAGCAAGGTGCTTCCCTCCCA...GACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CAA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTCCTGAAGCTTCCTGGTaGGCCGGGGGTGCTGTCTCC +
Preference number: 3 (lower is better)
Translates to: HLIALLLLEVRPSLLVLIPEASW*AGGAVS
Trigger: GGAGACAGCACCCCCGGCCAACCAGGAAGCTTCAGG...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 72 bp GCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTaGAAAGGGCCCTGTTCGGCTTCCGCCTTCACCCAG +
Preference number: 3 (lower is better)
Translates to: ATERLVPFRQIH*KGPCSASAFTQ
Trigger: CTGGGTGAAGGCGGAAGCCGAACAGGGCCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 72 bp CTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTaGCTGACTCCCCTGGAGGTCACCCTGAAGCTTCCT +
Preference number: 3 (lower is better)
Translates to: LSCCVSMWVYCW*LTPLEVTLKLP
Trigger: AGGAAGCTTCAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 72 bp TCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTaGTGGCTGACTCCCCTGGAGGTCACCCTGAAGCTT +
Preference number: 3 (lower is better)
Translates to: SLSCCVSMWVYC*WLTPLEVTLKL
Trigger: AAGCTTCAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CAA 90 bp AAATCAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGTGGGCTGGGCGCATCTaGGAGCCCCAGGGCTCTCAA +
Preference number: 3 (lower is better)
Translates to: KSAATERLVPFRQIHWKGWAGRI*EPQGSQ
Trigger: TTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCCA...CCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CAA 90 bp CCCCATTGCACAAGCCAGGGCAGTCACAAGGAGCTTGGGCTGCCTCACCGCCCTATAATGATCATGTTTTaGTGCCAGATGCAGTTAGCG +
Preference number: 3 (lower is better)
Translates to: PHCTSQGSHKELGLPHRPIMIMF*CQMQLA
Trigger: CGCTAACTGCATCTGGCACAAAAACATGATCATTAT...AGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 72 bp AGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTaGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTC +
Preference number: 3 (lower is better)
Translates to: RFWQSLSCCVSM*VYCWWLTPLEV
Trigger: GACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CAA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTTTTCCGGCAGATTCATaGGAAAGGGCCCTGTTCGGC +
Preference number: 3 (lower is better)
Translates to: HLIALLLLEVRPSLLVLIFPADS*ERALFG
Trigger: GCCGAACAGGGCCCTTTCCAATGAATCTGCCGGAAA...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CAA 90 bp GGACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTACAGATAAACTTCCACTaGAAGTCCGGGCGCTCAGCT +
Preference number: 3 (lower is better)
Translates to: GPETANADFGNPFPAVSLQINFH*KSGRSA
Trigger: AGCTGAGCGCCCGGACTTCAAGTGGAAGTTTATCTG...TAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR GCA 72 bp AGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTaGTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: RDCKCRFWQSLS*CVSMWVYCWWL
Trigger: CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CAA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGAGGGAAGCACCTaGCTATTCGTATCTCAACAT +
Preference number: 3 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMWEGST*LFVSQH
Trigger: ATGTTGAGATACGAATAGCAAGGTGCTTCCCTCCCA...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR-3UTR CAA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGCTGTTTTTGTTTGTTTaGAGGATGAGCGCGCTGCCT +
Preference number: 3 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMLFLFV*RMSALP
Trigger: AGGCAGCGCGCTCATCCTCAAAACAAACAAAAACAG...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 72 bp GTGCACCGAGTTGAATCGATGCTGACAATTATCAGATaGAGGTGGGTAGTAATTGGTACTTCGTGCCTTGCT +
Preference number: 3 (lower is better)
Translates to: VHRVESMLTIIR*RWVVIGTSCLA
Trigger: AGCAAGGCACGAAGTACCAATTACTACCCACCTCCATCTGATAATTGTCAGCATCGATTCAACTCGGTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR TCA 72 bp CCTGAAGAACAAATTACTAATGCATTGGCTCTTCTTTaGAAGGACTCACCCCCAAATGCTCTCCCTTCAGGG +
Preference number: 3 (lower is better)
Translates to: PEEQITNALALL*KDSPPNALPSG
Trigger: CCCTGAAGGGAGAGCATTTGGGGGTGAGTCCTTTCAAAGAAGAGCCAATGCATTAGTAATTTGTTCTTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR GCA 72 bp GAATGGTGCTATACGCACTCTGATATACAGCATGCTTaGCCTGTGGATCTTTTCTACAAATTCTACCCAGCC +
Preference number: 3 (lower is better)
Translates to: EWCYTHSDIQHA*PVDLFYKFYPA
Trigger: GGCTGGGTAGAATTTGTAGAAAAGATCCACAGGGCAAGCATGCTGTATATCAGAGTGCGTATAGCACCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 72 bp TTGAAGTCCGGGCGCTCAGCTGTGTCTACCAGCAAGTaGGTGTTCATTATTTTGCTAGATCAGAATGTAAAG +
Preference number: 3 (lower is better)
Translates to: LKSGRSAVSTSK*VFIILLDQNVK
Trigger: CTTTACATTCTGATCTAGCAAAATAATGAACACCCACTTGCTGGTAGACACAGCTGAGCGCCCGGACTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CCA 72 bp GCTATACGCACTCTGATATACAGCATGCTTGCCCTGTaGATCTTTTCTACAAATTCTACCCAGCCGTGTAAA +
Preference number: 3 (lower is better)
Translates to: AIRTLIYSMLAL*IFSTNSTQPCK
Trigger: TTTACACGGCTGGGTAGAATTTGTAGAAAAGATCCACAGGGCAAGCATGCTGTATATCAGAGTGCGTATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR TCA 72 bp TCGTATCTCAACATTATTTGTAAAATCAGCTGCCACTaGAAGATTGGTTCCTTTCCGGCAGATTCATTGGAA +
Preference number: 3 (lower is better)
Translates to: SYLNIICKISCH*KIGSFPADSLE
Trigger: TTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTGATTTTACAAATAATGTTGAGATACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp TGTTCGGCTTCCGCCTTCACCCAGCATGGGCTGGGCGCATCTTGGAGCCCCAGGGTACCCGCAGCACCGTaGGCTGGTACAGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: CSASAFTQHGLGASWSPRVPAAP*AGTGPG
Trigger: GCCCGGCCCTGTACCAGCGCACGGTGCTGCGGGTAC...CCTGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGAAGGCGGAAGCCGAACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp GACTCCCCTGGAGGTCACCCTGAAGCTTCCTGGTTGGCCGGGGGTGCTGTCTCCCAGGTCCTGGCAGTCTaGCGCAGCGGAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: DSPGGHPEASWLAGGAVSQVLAV*RSGAQH
Trigger: GTGCTGAGCTCCGCTGCGTCAGACTGCCAGGACCTG...GGAGACAGCACCCCCGGCCAACCAGGAAGCTTCAGGGTGACCTCCAGGGGAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CCAAATGCTCTCCCTTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTGGGAGCACTGCACCGCGGTaGGCGCTGGCGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PNALPSGGRDGVWLLRSGSTAPR*ALAAPL
Trigger: CAGAGGAGCCGCCAGCGCCCACCGCGGTGCAGTGCT...CCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAAGGGAGAGCATTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp TTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCCAGGTCCTGGCAGTCTaGCGCAGCGGAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LRMSALPGPFPIAQARAVQVLAV*RSGAQH
Trigger: GTGCTGAGCTCCGCTGCGTCAGACTGCCAGGACCTG...GACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp CCAAATGCTCTCCCTTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTGGGCCCTGGAGGTCACCCTaGAGCTTCCTGGTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PNALPSGGRDGVWLLRSGPWRSP*SFLVGR
Trigger: CCGGCCAACCAGGAAGCTTCAGGGTGACCTCCAGGG...CCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAAGGGAGAGCATTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp TGTTCGGCTTCCGCCTTCACCCAGCATGGGCTGGGCGCATCTTGGAGCCCCAGGAGCCACGGGATGTTGTaGTCCCCCGCGATCACCAAC +
Preference number: 4 (lower is better)
Translates to: CSASAFTQHGLGASWSPRSHGML*SPAITN
Trigger: GTTGGTGATCGCGGGGGAGCACAACATCCCGTGGCT...CCTGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGAAGGCGGAAGCCGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CCAAATGCTCTCCCTTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTGGGCTGTACACGAAGCACTaGACCGCGGTGGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PNALPSGGRDGVWLLRSGLYTKH*TAVGAG
Trigger: GCCAGCGCCCACCGCGGTGCAGTGCTTCGTGTACAG...CCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAAGGGAGAGCATTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp GACTCCCCTGGAGGTCACCCTGAAGCTTCCTGGTTGGCCGGGGGTGCTGTCTCCGGACTCACCCCCAAATaGTCTCCCTTCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: DSPGGHPEASWLAGGAVSGLTPK*SPFRGQ
Trigger: CTGCCCCCTGAAGGGAGAGCATTTGGGGGTGAGTCC...GGAGACAGCACCCCCGGCCAACCAGGAAGCTTCAGGGTGACCTCCAGGGGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp GACTCCCCTGGAGGTCACCCTGAAGCTTCCTGGTTGGCCGGGGGTGCTGTCTCCGATGAGCGCGCTGCCTaGTCCCTTCCCCATTGCACA +
Preference number: 4 (lower is better)
Translates to: DSPGGHPEASWLAGGAVSDERAA*SLPHCT
Trigger: TGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATC...GGAGACAGCACCCCCGGCCAACCAGGAAGCTTCAGGGTGACCTCCAGGGGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CCCCATTGCACAAGCCAGGGCAGTCACAAGGAGCTTGGGCTGCCTCACCGCCCTAGCCACGGGATGTTGTaGTCCCCCGCGATCACCAAC +
Preference number: 4 (lower is better)
Translates to: PHCTSQGSHKELGLPHRPSHGML*SPAITN
Trigger: GTTGGTGATCGCGGGGGAGCACAACATCCCGTGGCT...AGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGAGCACTGCACCGCGGTaGGCGCTGGCGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CVSMWVYCWWLTPLEVTLSTAPR*ALAAPL
Trigger: CAGAGGAGCCGCCAGCGCCCACCGCGGTGCAGTGCT...CAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CCAAATGCTCTCCCTTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTGGGGGCAGGGACGGGGTCTaGCTACTGAGATCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PNALPSGGRDGVWLLRSGGRDGV*LLRSGL
Trigger: GAGCCCAGATCTCAGTAGCCAGACCCCGTCCCTGCC...CCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAAGGGAGAGCATTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CCTTCACCCAGCATGGGCTGGGCGCATCTTGGAGCCCCAGGGCTCTCAAACCTACACCCTGAAGCTTCCTaGTTGGCCGGGGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PSPSMGWAHLGAPGLSNLHPEAS*LAGGAV
Trigger: GACAGCACCCCCGGCCAACCAGGAAGCTTCAGGGTG...TAGGTTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp TTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCTGTACTGTTGGTGGCTaGCTCCCCTGGAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: LRMSALPGPFPIAQARAVCTVGG*LPWRSP
Trigger: GGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACA...GACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CCTTCACCCAGCATGGGCTGGGCGCATCTTGGAGCCCCAGGGCTCTCAAACCTAGACCCCGCTTCAGGGTaGCGTACACGAAGACTAGGG +
Preference number: 4 (lower is better)
Translates to: PSPSMGWAHLGAPGLSNLDPASG*RTRRLG
Trigger: CCCTAGTCTTCGTGTACGGCACCCTGAAGCGGGGTC...TAGGTTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CCAAATGCTCTCCCTTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTGGGGGACTCACCCCCAAATaGTCTCCCTTCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PNALPSGGRDGVWLLRSGGLTPK*SPFRGQ
Trigger: CTGCCCCCTGAAGGGAGAGCATTTGGGGGTGAGTCC...CCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAAGGGAGAGCATTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CCAAATGCTCTCCCTTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTGGGGTTCCACTCAGGTCCTaGCAGTCTGACGCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: PNALPSGGRDGVWLLRSGVPLRS*QSDAAE
Trigger: CTCCGCTGCGTCAGACTGCCAGGACCTGAGTGGAAC...CCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAAGGGAGAGCATTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGCGCAGCACCGTGCGCTaGTACAGGGCCGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: CVSMWVYCWWLTPLEVTLRSTVR*YRAGQL
Trigger: GAGTTGCCCGGCCCTGTACCAGCGCACGGTGCTGCG...CAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCCAGTCACAAGGAGCTTaGGCTGCCTCACCGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LRMSALPGPFPIAQARAVQSQGA*AASPPS
Trigger: TGAGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTG...GACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CCAAATGCTCTCCCTTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTGGGGATGAGCGCGCTGCCTaGTCCCTTCCCCATTGCACA +
Preference number: 4 (lower is better)
Translates to: PNALPSGGRDGVWLLRSGDERAA*SLPHCT
Trigger: TGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATC...CCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAAGGGAGAGCATTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CCAAATGCTCTCCCTTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTGGGACAAGGAGCTTGGGCTaGCTCACCGCCCTCATCAAG +
Preference number: 4 (lower is better)
Translates to: PNALPSGGRDGVWLLRSGTRSLG*LTALIK
Trigger: CTTGATGAGGGCGGTGAGGCAGCCCAAGCTCCTTGT...CCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAAGGGAGAGCATTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CCTTCACCCAGCATGGGCTGGGCGCATCTTGGAGCCCCAGGGCTCTCAAACCTACCACTTGCCTGGGTCTaGGCCACAGACTGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: PSPSMGWAHLGAPGLSNLPLAWV*ATDCKL
Trigger: AAGCTTACAGTCTGTGGCCCAGACCCAGGCAAGTGG...TAGGTTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376250.6
CDS-3UTR CCA 90 bp ATTCTACCCAGCCGTGTAAAATCGGCTTTCTCAGGGGTTACAGGCCAGAATCAGAAGGCTGCGGAGCCGTaGGCGCCGTCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: ILPSRVKSAFSGVTGQNQKAAEP*APSRRT
Trigger: GGTCCTGCGGGACGGCGCCCACGGCTCCGCAGCCTT...CTGATTCTGGCCTGTAACCCCTGAGAAAGCCGATTTTACACGGCTGGGTAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTGGTAGGGCTCCAGCGTaGGGCCGCGCGCCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: HLIALLLLEVRPSLLVLIGRAPA*GRAPER
Trigger: CCTTTCGGGCGCGCGGCCGCACGCTGGAGCCCTACC...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp ATTCTACCCAGCCGTGTAAAATCGGCTTTCTCAGGGGTTACAGGCCAGAATCAGGTACCCGCAGCACCGTaGGCTGGTACAGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: ILPSRVKSAFSGVTGQNQVPAAP*AGTGPG
Trigger: GCCCGGCCCTGTACCAGCGCACGGTGCTGCGGGTAC...CTGATTCTGGCCTGTAACCCCTGAGAAAGCCGATTTTACACGGCTGGGTAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGACCCTGTGGTTGGGCTaGCCCCGCTTCAGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLTLWLG*PRFRVP
Trigger: CGGCACCCTGAAGCGGGGTCAGCCCAACCACAGGGT...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp GACTCCCCTGGAGGTCACCCTGAAGCTTCCTGGTTGGCCGGGGGTGCTGTCTCCAAAATCAGCTGCCACTaGAAGATTGGTTCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: DSPGGHPEASWLAGGAVSKISCH*KIGSFP
Trigger: CGGAAAGGAACCAATCTTTCAGTGGCAGCTGATTTT...GGAGACAGCACCCCCGGCCAACCAGGAAGCTTCAGGGTGACCTCCAGGGGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp ATTCTACCCAGCCGTGTAAAATCGGCTTTCTCAGGGGTTACAGGCCAGAATCAGTCATGGTGCGGGAGCTaGGCCCACTCCGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: ILPSRVKSAFSGVTGQNQSWCGS*AHSGGK
Trigger: CTTCCCGCCGGAGTGGGCCCAGCTCCCGCACCATGA...CTGATTCTGGCCTGTAACCCCTGAGAAAGCCGATTTTACACGGCTGGGTAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CCCCATTGCACAAGCCAGGGCAGTCACAAGGAGCTTGGGCTGCCTCACCGCCCTCATTTCAGACTTTGCTaGGAAGCAGAAGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PHCTSQGSHKELGLPHRPHFRLC*EAEARA
Trigger: GGCTCTTGCTTCTGCTTCCCAGCAAAGTCTGAAATG...AGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp AGAAGTGAGGCCCTCACTCCTGGTGCTGATTTTCAAAACTTCCTAAGGACCAGAACCCTGTGGTTGGGCTaGCCCCGCTTCAGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: RSEALTPGADFQNFLRTRTLWLG*PRFRVP
Trigger: CGGCACCCTGAAGCGGGGTCAGCCCAACCACAGGGT...TCTGGTCCTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGGGCCTCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTCCCGAGCCGGGCAGGTaGAGCAGCCACGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: HLIALLLLEVRPSLLVLIPEPGR*SSHGML
Trigger: CAACATCCCGTGGCTGCTGCACCTGCCCGGCTCGGG...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp AGAAGTGAGGCCCTCACTCCTGGTGCTGATTTTCAAAACTTCCTAAGGACCAGACCCGAGCCGGGCAGGTaGAGCAGCCACGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: RSEALTPGADFQNFLRTRPEPGR*SSHGML
Trigger: CAACATCCCGTGGCTGCTGCACCTGCCCGGCTCGGG...TCTGGTCCTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGGGCCTCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CCTTCACCCAGCATGGGCTGGGCGCATCTTGGAGCCCCAGGGCTCTCAAACCTACTGCCACTGAAAGATTaGTTCCTTTCCGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: PSPSMGWAHLGAPGLSNLLPLKD*FLSGRF
Trigger: GAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAG...TAGGTTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCCTGGCTACTGAGATCTaGGCTCAGATAAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: LRMSALPGPFPIAQARAVLATEI*AQINFH
Trigger: GTGGAAGTTTATCTGAGCCCAGATCTCAGTAGCCAG...GACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp TGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGCCCTGGAGGTCACCCTaGAGCTTCCTGGTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: CRFWQSLSCCVSMWVYCWPWRSP*SFLVGR
Trigger: CCGGCCAACCAGGAAGCTTCAGGGTGACCTCCAGGG...CCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp TTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCCCTCACTCCTGGTGCTaGTTTTCAAAACTTCCTAAG +
Preference number: 4 (lower is better)
Translates to: LRMSALPGPFPIAQARAVPHSWC*FSKLPK
Trigger: CTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGG...GACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp GACTCCCCTGGAGGTCACCCTGAAGCTTCCTGGTTGGCCGGGGGTGCTGTCTCCATGATCATGTTTTTGTaGCAGATGCAGTTAGCGATC +
Preference number: 4 (lower is better)
Translates to: DSPGGHPEASWLAGGAVSMIMFL*QMQLAI
Trigger: GATCGCTAACTGCATCTGGCACAAAAACATGATCAT...GGAGACAGCACCCCCGGCCAACCAGGAAGCTTCAGGGTGACCTCCAGGGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp ATTCTACCCAGCCGTGTAAAATCGGCTTTCTCAGGGGTTACAGGCCAGAATCAGACTCCGGCGGGAAGGTaGCCCTGCTGTACACGAAGC +
Preference number: 4 (lower is better)
Translates to: ILPSRVKSAFSGVTGQNQTPAGR*PCCTRS
Trigger: GCTTCGTGTACAGCAGGGCCACCTTCCCGCCGGAGT...CTGATTCTGGCCTGTAACCCCTGAGAAAGCCGATTTTACACGGCTGGGTAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp ATTCTACCCAGCCGTGTAAAATCGGCTTTCTCAGGGGTTACAGGCCAGAATCAGGGGCTGGGCGCATCTTaGAGCCCCAGGGCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: ILPSRVKSAFSGVTGQNQGLGAS*SPRALK
Trigger: TTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCC...CTGATTCTGGCCTGTAACCCCTGAGAAAGCCGATTTTACACGGCTGGGTAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp GACTCCCCTGGAGGTCACCCTGAAGCTTCCTGGTTGGCCGGGGGTGCTGTCTCCAGCATGCTTGCCCTGTaGATCTTTTCTACAAATTCT +
Preference number: 4 (lower is better)
Translates to: DSPGGHPEASWLAGGAVSSMLAL*IFSTNS
Trigger: AGAATTTGTAGAAAAGATCCACAGGGCAAGCATGCT...GGAGACAGCACCCCCGGCCAACCAGGAAGCTTCAGGGTGACCTCCAGGGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp GACTCCCCTGGAGGTCACCCTGAAGCTTCCTGGTTGGCCGGGGGTGCTGTCTCCATTATCAGATGGAGGTaGGTAGTAATTGGTACTTCG +
Preference number: 4 (lower is better)
Translates to: DSPGGHPEASWLAGGAVSIIRWR*VVIGTS
Trigger: CGAAGTACCAATTACTACCCACCTCCATCTGATAAT...GGAGACAGCACCCCCGGCCAACCAGGAAGCTTCAGGGTGACCTCCAGGGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGCTTAGAGGGCAGTGGTaGTTCACGGGACTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLLRGQW*FTGLPA
Trigger: TGCGGGGAGTCCCGTGAAGCACCACTGCCCTCTAAG...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGGCGGGAAGGTGGCCCTaGTGTACACGAAGCACTGCA +
Preference number: 4 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLAGRWP*CTRSTA
Trigger: TGCAGTGCTTCGTGTACAGCAGGGCCACCTTCCCGC...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGCCCTACAAGGAGCTTGGGCTaGCTCACCGCCCTCATCAAG +
Preference number: 4 (lower is better)
Translates to: QLPLKDWFLSGRFIGKGPTRSLG*LTALIK
Trigger: CTTGATGAGGGCGGTGAGGCAGCCCAAGCTCCTTGT...AGGGCCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CCAAATGCTCTCCCTTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTGGGACCAGAGACTGCAAATaGAGATTTTGGCAATCCCTT +
Preference number: 4 (lower is better)
Translates to: PNALPSGGRDGVWLLRSGTRDCK*RFWQSL
Trigger: AAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT...CCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAAGGGAGAGCATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CCAAATGCTCTCCCTTCAGGGGGCAGGGACGGGGTCTGGCTACTGAGATCTGGGCTAAGGACCAGAGACTaGAAATGCAGATTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PNALPSGGRDGVWLLRSGLRTRD*KCRFWQ
Trigger: TTGCCAAAATCTGCATTTGCAGTCTCTGGTCCTTAG...CCCAGATCTCAGTAGCCAGACCCCGTCCCTGCCCCCTGAAGGGAGAGCATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGGCAGGACCCTGTGGTTaGGCTGACCCCGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMAGPCG*ADPASG
Trigger: CCCTGAAGCGGGGTCAGCCCAACCACAGGGTCCTGC...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTACTCCGGCGGGAAGGTaGCCCTGCTGTACACGAAGC +
Preference number: 4 (lower is better)
Translates to: HLIALLLLEVRPSLLVLITPAGR*PCCTRS
Trigger: GCTTCGTGTACAGCAGGGCCACCTTCCCGCCGGAGT...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTCACCCAGCATGGGCTaGGCGCATCTTGGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CRFWQSLSCCVSMWVYCWSPSMG*AHLGAP
Trigger: TGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGA...CCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CCCCATTGCACAAGCCAGGGCAGTCACAAGGAGCTTGGGCTGCCTCACCGCCCTAGTGCTGTTTGTATTTaGAAGCTAAGCTTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PHCTSQGSHKELGLPHRPSAVCI*KLSFCQ
Trigger: CTGACAGAAGCTTAGCTTCCAAATACAAACAGCACT...AGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CCTTCACCCAGCATGGGCTGGGCGCATCTTGGAGCCCCAGGGCTCTCAAACCTATGCAAATGCAGATTTTaGCAATCCCTTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PSPSMGWAHLGAPGLSNLCKCRF*QSLSCC
Trigger: ACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCA...TAGGTTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCTGCAAATGCAGATTTTaGCAATCCCTTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRMSALPGPFPIAQARAVCKCRF*QSLSCC
Trigger: ACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCA...GACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CAA 72 bp CTGGCTACTGAGATCTGGGCTCAGATAAACTTCCACTaGAAGTCCGGGCGCTCAGCTGTGTCTACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LATEIWAQINFH*KSGRSAVSTSK
Trigger: CTTGCTGGTAGACACAGCTGAGCGCCCGGACTTCAAGTGGAAGTTTATCTGAGCCCAGATCTCAGTAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp CCCCATTGCACAAGCCAGGGCAGTCACAAGGAGCTTGGGCTGCCTCACCGCCCTAGTTTGCCCTTTCTTTaGATGAAGACAATGTACACA +
Preference number: 4 (lower is better)
Translates to: PHCTSQGSHKELGLPHRPSLPFL*MKTMYT
Trigger: TGTGTACATTGTCTTCATTCAAAGAAAGGGCAAACT...AGGGCGGTGAGGCAGCCCAAGCTCCTTGTGACTGCCCTGGCTTGTGCAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTGCGGGAAGGTGGCCCTaGTGTACACGAAGCACTGCA +
Preference number: 4 (lower is better)
Translates to: HLIALLLLEVRPSLLVLIAGRWP*CTRSTA
Trigger: TGCAGTGCTTCGTGTACAGCAGGGCCACCTTCCCGC...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp ATTCTACCCAGCCGTGTAAAATCGGCTTTCTCAGGGGTTACAGGCCAGAATCAGAACCTAGGCCCACCCTaGCCGTCCCCCTTATCTGTT +
Preference number: 4 (lower is better)
Translates to: ILPSRVKSAFSGVTGQNQNLGPP*PSPLSV
Trigger: AACAGATAAGGGGGACGGGCAGGGTGGGCCTAGGTT...CTGATTCTGGCCTGTAACCCCTGAGAAAGCCGATTTTACACGGCTGGGTAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGCCCTCTGGTTGGCCGGGGGTaGTGTCTCCACTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: QLPLKDWFLSGRFIGKGPLVGRG*CLHCFC
Trigger: ACAAAAACAGTGGAGACAGCACCCCCGGCCAACCAG...AGGGCCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp GGACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTAGGTCTTAGAGGGCAGTaGTGCTTCACGGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: GPETANADFGNPFPAVSLGLRGQ*CFTGLP
Trigger: GGGGAGTCCCGTGAAGCACCACTGCCCTCTAAGACC...TAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp AGAAGTGAGGCCCTCACTCCTGGTGCTGATTTTCAAAACTTCCTAAGGACCAGAGGTCTTAGAGGGCAGTaGTGCTTCACGGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: RSEALTPGADFQNFLRTRGLRGQ*CFTGLP
Trigger: GGGGAGTCCCGTGAAGCACCACTGCCCTCTAAGACC...TCTGGTCCTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGGGCCTCACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTCACCCAGCATGGGCTaGGCGCATCTTGGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMSPSMG*AHLGAP
Trigger: TGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGA...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CCTTCACCCAGCATGGGCTGGGCGCATCTTGGAGCCCCAGGGCTCTCAAACCTAATTATCAGATGGAGGTaGGTAGTAATTGGTACTTCG +
Preference number: 4 (lower is better)
Translates to: PSPSMGWAHLGAPGLSNLIIRWR*VVIGTS
Trigger: CGAAGTACCAATTACTACCCACCTCCATCTGATAAT...TAGGTTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp ATTCTACCCAGCCGTGTAAAATCGGCTTTCTCAGGGGTTACAGGCCAGAATCAGGTCCACTTCACAGGGTaGCCAGAAAGTCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: ILPSRVKSAFSGVTGQNQVHFTG*PESPWG
Trigger: TCCCCATGGACTTTCTGGTCACCCTGTGAAGTGGAC...CTGATTCTGGCCTGTAACCCCTGAGAAAGCCGATTTTACACGGCTGGGTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376250.6
CDS-3UTR TCA 90 bp TGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGAAAATCAGCTGCCACTaGAAGATTGGTTCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: CVSMWVYCWWLTPLEVTLKISCH*KIGSFP
Trigger: CGGAAAGGAACCAATCTTTCAGTGGCAGCTGATTTT...CAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp TGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGCCTCACTCCTGGTGCTaGTTTTCAAAACTTCCTAAG +
Preference number: 4 (lower is better)
Translates to: CVSMWVYCWWLTPLEVTLPHSWC*FSKLPK
Trigger: CTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGG...CAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGCTTAGAGGGCAGTGGTaGTTCACGGGACTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMLRGQW*FTGLPA
Trigger: TGCGGGGAGTCCCGTGAAGCACCACTGCCCTCTAAG...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp ATCAGATGGAGGTGGGTAGTAATTGGTACTTCGTGCCTTGCTAAAATTATTTTAGGTAGGGCTCCAGCGTaGGGCCGCGCGCCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: IRWRWVVIGTSCLAKIILGRAPA*GRAPER
Trigger: CCTTTCGGGCGCGCGGCCGCACGCTGGAGCCCTACC...TAAAATAATTTTAGCAAGGCACGAAGTACCAATTACTACCCACCTCCATCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp GGACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTAAACCTAGGCCCACCCTaGCCGTCCCCCTTATCTGTT +
Preference number: 4 (lower is better)
Translates to: GPETANADFGNPFPAVSLNLGPP*PSPLSV
Trigger: AACAGATAAGGGGGACGGGCAGGGTGGGCCTAGGTT...TAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp GGACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGGTCCCTTCCCCATTaGACAAGCCAGGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GPETANADFGNPFPAVSLWSLPH*TSQGSH
Trigger: GTGACTGCCCTGGCTTGTGCAATGGGGAAGGGACCA...TAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp ATTCTACCCAGCCGTGTAAAATCGGCTTTCTCAGGGGTTACAGGCCAGAATCAGTCCCCGCAGCGATCTTaGCTCCAGCGTGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: ILPSRVKSAFSGVTGQNQSPQRS*LQREGK
Trigger: TTTACCTTCACGCTGGAGCCAAGATCGCTGCGGGGA...CTGATTCTGGCCTGTAACCCCTGAGAAAGCCGATTTTACACGGCTGGGTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TACGTTTACGTCGTCATTTATTCCACAGAGTCAAGACCAATATTCTGCCAAAAAAAGGCTGCGGAGCCGTaGGCGCCGTCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: YVYVVIYSTESRPIFCQKKAAEP*APSRRT
Trigger: GGTCCTGCGGGACGGCGCCCACGGCTCCGCAGCCTT...TTTTTGGCAGAATATTGGTCTTGACTCTGTGGAATAAATGACGACGTAAACGTA
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGCCCTTTCCGGCAGATTCATTaGAAAGGGCCCTGTTCGGCT +
Preference number: 4 (lower is better)
Translates to: QLPLKDWFLSGRFIGKGPFRQIH*KGPCSA
Trigger: AGCCGAACAGGGCCCTTTCCAATGAATCTGCCGGAA...AGGGCCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CGCTCAGCTGTGTCTACCAGCAAGTGGGTGTTCATTATTTTGCTAGATCAGAATCACCCTGAAGCTTCCTaGTTGGCCGGGGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RSAVSTSKWVFIILLDQNHPEAS*LAGGAV
Trigger: GACAGCACCCCCGGCCAACCAGGAAGCTTCAGGGTG...ATTCTGATCTAGCAAAATAATGAACACCCACTTGCTGGTAGACACAGCTGAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp AGAAGTGAGGCCCTCACTCCTGGTGCTGATTTTCAAAACTTCCTAAGGACCAGATGGGTGTACTGTTGGTaGCTGACTCCCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: RSEALTPGADFQNFLRTRWVYCW*LTPLEV
Trigger: GACCTCCAGGGGAGTCAGCCACCAACAGTACACCCA...TCTGGTCCTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGGGCCTCACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGCCCTTGGCAATCCCTTTCCTaGTGTGTCTCTATGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QLPLKDWFLSGRFIGKGPWQSLS*CVSMWV
Trigger: CACCCACATAGAGACACAGCAGGAAAGGGATTGCCA...AGGGCCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTCCCCGCAGCGATCTTaGCTCCAGCGTGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: CRFWQSLSCCVSMWVYCWSPQRS*LQREGK
Trigger: TTTACCTTCACGCTGGAGCCAAGATCGCTGCGGGGA...CCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CGCTCAGCTGTGTCTACCAGCAAGTGGGTGTTCATTATTTTGCTAGATCAGAATGTTCCACTCAGGTCCTaGCAGTCTGACGCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: RSAVSTSKWVFIILLDQNVPLRS*QSDAAE
Trigger: CTCCGCTGCGTCAGACTGCCAGGACCTGAGTGGAAC...ATTCTGATCTAGCAAAATAATGAACACCCACTTGCTGGTAGACACAGCTGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp AATCCTAAATTTTTCTTACCAGGTAGAAAGATGGGAGGGAAGCACCTTGCTATTCGCAGCACCGTGCGCTaGTACAGGGCCGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: NPKFFLPGRKMGGKHLAIRSTVR*YRAGQL
Trigger: GAGTTGCCCGGCCCTGTACCAGCGCACGGTGCTGCG...AATAGCAAGGTGCTTCCCTCCCATCTTTCTACCTGGTAAGAAAAATTTAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGTTCCGGCAGATTCATTaGAAAGGGCCCTGTTCGGCT +
Preference number: 4 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLFRQIH*KGPCSA
Trigger: AGCCGAACAGGGCCCTTTCCAATGAATCTGCCGGAA...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp AGAAGTGAGGCCCTCACTCCTGGTGCTGATTTTCAAAACTTCCTAAGGACCAGAATGTGGGTGTACTGTTaGTGGCTGACTCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RSEALTPGADFQNFLRTRMWVYC*WLTPLE
Trigger: CTCCAGGGGAGTCAGCCACCAACAGTACACCCACAT...TCTGGTCCTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGGGCCTCACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGATGTGGGTGTACTGTTaGTGGCTGACTCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CRFWQSLSCCVSMWVYCWMWVYC*WLTPLE
Trigger: CTCCAGGGGAGTCAGCCACCAACAGTACACCCACAT...CCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp ACCTTTCAGTCATCACCCAATTTAATTAGCCATTTGCATGATGCTTTCACACACCTGTACACGAAGCACTaGACCGCGGTGGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TFQSSPNLISHLHDAFTHLYTKH*TAVGAG
Trigger: GCCAGCGCCCACCGCGGTGCAGTGCTTCGTGTACAG...GTGTGTGAAAGCATCATGCAAATGGCTAATTAAATTGGGTGATGACTGAAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455100.2
CDS-3UTR GCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTACAGGAACACCCCTGTaGAGCTACGTTTACGTCGTC +
Preference number: 4 (lower is better)
Translates to: HLIALLLLEVRPSLLVLITGTPL*SYVYVV
Trigger: GACGACGTAAACGTAGCTGCACAGGGGTGTTCCTGT...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp AATCCTAAATTTTTCTTACCAGGTAGAAAGATGGGAGGGAAGCACCTTGCTATTGCAGGACCCTGTGGTTaGGCTGACCCCGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: NPKFFLPGRKMGGKHLAIAGPCG*ADPASG
Trigger: CCCTGAAGCGGGGTCAGCCCAACCACAGGGTCCTGC...AATAGCAAGGTGCTTCCCTCCCATCTTTCTACCTGGTAAGAAAAATTTAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGGCATTGGCTCTTCTTTaGAAGGACTCACCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLALALL*KDSPPN
Trigger: ATTTGGGGGTGAGTCCTTTCAAAGAAGAGCCAATGC...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp ATTCTACCCAGCCGTGTAAAATCGGCTTTCTCAGGGGTTACAGGCCAGAATCAGAGCCGTGCACCGAGTTaGATCGATGCTGACAATTAT +
Preference number: 4 (lower is better)
Translates to: ILPSRVKSAFSGVTGQNQSRAPS*IDADNY
Trigger: ATAATTGTCAGCATCGATTCAACTCGGTGCACGGCT...CTGATTCTGGCCTGTAACCCCTGAGAAAGCCGATTTTACACGGCTGGGTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp TGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGAGTTTGCCCTTTCTTTaGATGAAGACAATGTACACA +
Preference number: 4 (lower is better)
Translates to: CVSMWVYCWWLTPLEVTLSLPFL*MKTMYT
Trigger: TGTGTACATTGTCTTCATTCAAAGAAAGGGCAAACT...CAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp TCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGAAGCTTTTTGTACTTCTGCTGTaGGATTCCCTAGTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: SMWVYCWWLTPLEVTLKLFVLLL*DSLVSK
Trigger: TTTTGACACTAGGGAATCTCACAGCAGAAGTACAAA...AAGCTTCAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp GTAAGTGAGCTCTCCCAACAGAGAATGAGGTTACTAAAGATCACAGCAGCTGCAGAGCTGCTATCCAGCTaGAGTGAGAACCCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: VSELSQQRMRLLKITAAAELLSS*SENPGF
Trigger: GAAACCTGGGTTCTCACTGCAGCTGGATAGCAGCTC...TGCAGCTGCTGTGATCTTTAGTAACCTCATTCTCTGTTGGGAGAGCTCACTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp AAATCAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGGAGCTGCTATCCAGCTaGAGTGAGAACCCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: KSAATERLVPFRQIHWKGELLSS*SENPGF
Trigger: GAAACCTGGGTTCTCACTGCAGCTGGATAGCAGCTC...CCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CGCTCAGCTGTGTCTACCAGCAAGTGGGTGTTCATTATTTTGCTAGATCAGAATCTGGTTGGCCGGGGGTaGTGTCTCCACTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: RSAVSTSKWVFIILLDQNLVGRG*CLHCFC
Trigger: ACAAAAACAGTGGAGACAGCACCCCCGGCCAACCAG...ATTCTGATCTAGCAAAATAATGAACACCCACTTGCTGGTAGACACAGCTGAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTTGGCAATCCCTTTCCTaGTGTGTCTCTATGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HLIALLLLEVRPSLLVLIWQSLS*CVSMWV
Trigger: CACCCACATAGAGACACAGCAGGAAAGGGATTGCCA...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp AGAAGTGAGGCCCTCACTCCTGGTGCTGATTTTCAAAACTTCCTAAGGACCAGATATTTACCACTTGCCTaGGTCTGGGCCACAGACTGT +
Preference number: 4 (lower is better)
Translates to: RSEALTPGADFQNFLRTRYLPLA*VWATDC
Trigger: ACAGTCTGTGGCCCAGACCCAGGCAAGTGGTAAATA...TCTGGTCCTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGGGCCTCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGAAGCTTAGCATGCTTGCCCTGTaGATCTTTTCTACAAATTCT +
Preference number: 4 (lower is better)
Translates to: SMWVYCWWLTPLEVTLKLSMLAL*IFSTNS
Trigger: AGAATTTGTAGAAAAGATCCACAGGGCAAGCATGCT...AAGCTTCAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGAAGCTTGTGTCTACCAGCAAGTaGGTGTTCATTATTTTGCTA +
Preference number: 4 (lower is better)
Translates to: SMWVYCWWLTPLEVTLKLVSTSK*VFIILL
Trigger: TAGCAAAATAATGAACACCCACTTGCTGGTAGACAC...AAGCTTCAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp ACCTTTCAGTCATCACCCAATTTAATTAGCCATTTGCATGATGCTTTCACACACGGCAGGGACGGGGTCTaGCTACTGAGATCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TFQSSPNLISHLHDAFTHGRDGV*LLRSGL
Trigger: GAGCCCAGATCTCAGTAGCCAGACCCCGTCCCTGCC...GTGTGTGAAAGCATCATGCAAATGGCTAATTAAATTGGGTGATGACTGAAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455100.2
CDS-3UTR CCA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGCATTTCAGACTTTGCTaGGAAGCAGAAGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLHFRLC*EAEARA
Trigger: GGCTCTTGCTTCTGCTTCCCAGCAAAGTCTGAAATG...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGCCACTTGCCTGGGTCTaGGCCACAGACTGTTACATA +
Preference number: 4 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMPLAWV*ATDCYI
Trigger: TATGTAACAGTCTGTGGCCCAGACCCAGGCAAGTGG...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455100.2
CDS-3UTR TCA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGGTGCTATACGCACTCTaGTATACAGCATGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMVLYAL*YTACLP
Trigger: GGGCAAGCATGCTGTATATCAGAGTGCGTATAGCAC...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CGCTCAGCTGTGTCTACCAGCAAGTGGGTGTTCATTATTTTGCTAGATCAGAATACAGGAACACCCCTGTaGAGCTACGTTTACGTCGTC +
Preference number: 4 (lower is better)
Translates to: RSAVSTSKWVFIILLDQNTGTPL*SYVYVV
Trigger: GACGACGTAAACGTAGCTGCACAGGGGTGTTCCTGT...ATTCTGATCTAGCAAAATAATGAACACCCACTTGCTGGTAGACACAGCTGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp ATCAGATGGAGGTGGGTAGTAATTGGTACTTCGTGCCTTGCTAAAATTATTTTAGGGCTGGGCGCATCTTaGAGCCCCAGGGCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: IRWRWVVIGTSCLAKIILGLGAS*SPRALK
Trigger: TTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCC...TAAAATAATTTTAGCAAGGCACGAAGTACCAATTACTACCCACCTCCATCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTCTGCCACTGAAAGATTaGTTCCTTTCCGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: HLIALLLLEVRPSLLVLILPLKD*FLSGRF
Trigger: GAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAG...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp GTAAGTGAGCTCTCCCAACAGAGAATGAGGTTACTAAAGATCACAGCAGCTGCAAGCCGTGCACCGAGTTaGATCGATGCTGACAATTAT +
Preference number: 4 (lower is better)
Translates to: VSELSQQRMRLLKITAAASRAPS*IDADNY
Trigger: ATAATTGTCAGCATCGATTCAACTCGGTGCACGGCT...TGCAGCTGCTGTGATCTTTAGTAACCTCATTCTCTGTTGGGAGAGCTCACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp TGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGAGTCTGCCATTAAGTTaGAGAGTAAGTGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CRFWQSLSCCVSMWVYCWSLPLS*RVSELS
Trigger: GGAGAGCTCACTTACTCTTCAACTTAATGGCAGACT...CCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp TACGTTTACGTCGTCATTTATTCCACAGAGTCAAGACCAATATTCTGCCAAAAAGACCCCGCTTCAGGGTaGCGTACACGAAGACTAGGG +
Preference number: 4 (lower is better)
Translates to: YVYVVIYSTESRPIFCQKDPASG*RTRRLG
Trigger: CCCTAGTCTTCGTGTACGGCACCCTGAAGCGGGGTC...TTTTTGGCAGAATATTGGTCTTGACTCTGTGGAATAAATGACGACGTAAACGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp TGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGGAGTTGAATCGATGCTaGCAATTATCAGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: CRFWQSLSCCVSMWVYCWELNRC*QLSDGG
Trigger: ACCTCCATCTGATAATTGTCAGCATCGATTCAACTC...CCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTGAGTTGAATCGATGCTaGCAATTATCAGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: HLIALLLLEVRPSLLVLIELNRC*QLSDGG
Trigger: ACCTCCATCTGATAATTGTCAGCATCGATTCAACTC...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp CAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGCCCTGCTTTCACACACAATTaGTTCAAGCATTATACAGGA +
Preference number: 4 (lower is better)
Translates to: QLPLKDWFLSGRFIGKGPAFTHN*FKHYTG
Trigger: TCCTGTATAATGCTTGAATCAATTGTGTGTGAAAGC...AGGGCCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTTCTTCAAGGAAGTGTTaGCTTAGAATCCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: HLIALLLLEVRPSLLVLISSRKC*LRIQIH
Trigger: GTGGATCTGGATTCTAAGGCAACACTTCCTTGAAGA...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376250.6
CDS-3UTR GCA 90 bp AAATCAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGGGGAGGGAAGCACCTTaGTATTCGTATCTCAACATT +
Preference number: 4 (lower is better)
Translates to: KSAATERLVPFRQIHWKGGREAP*YSYLNI
Trigger: AATGTTGAGATACGAATAGCAAGGTGCTTCCCTCCC...CCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTGATTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGGGGAGGGAAGCACCTTaGTATTCGTATCTCAACATT +
Preference number: 4 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMGREAP*YSYLNI
Trigger: AATGTTGAGATACGAATAGCAAGGTGCTTCCCTCCC...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp TGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGGATATACAGCATGCTTaGCCTGTGGATCTTTTCTAC +
Preference number: 4 (lower is better)
Translates to: CRFWQSLSCCVSMWVYCWDIQHA*PVDLFY
Trigger: GTAGAAAAGATCCACAGGGCAAGCATGCTGTATATC...CCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp TACGTTTACGTCGTCATTTATTCCACAGAGTCAAGACCAATATTCTGCCAAAAATGGTCCCTTCCCCATTaGACAAGCCAGGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: YVYVVIYSTESRPIFCQKWSLPH*TSQGSH
Trigger: GTGACTGCCCTGGCTTGTGCAATGGGGAAGGGACCA...TTTTTGGCAGAATATTGGTCTTGACTCTGTGGAATAAATGACGACGTAAACGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp AGAAGTGAGGCCCTCACTCCTGGTGCTGATTTTCAAAACTTCCTAAGGACCAGAACCAGAGACTGCAAATaGAGATTTTGGCAATCCCTT +
Preference number: 4 (lower is better)
Translates to: RSEALTPGADFQNFLRTRTRDCK*RFWQSL
Trigger: AAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT...TCTGGTCCTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGGGCCTCACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp CGCTCAGCTGTGTCTACCAGCAAGTGGGTGTTCATTATTTTGCTAGATCAGAATCTGGCTACTGAGATCTaGGCTCAGATAAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: RSAVSTSKWVFIILLDQNLATEI*AQINFH
Trigger: GTGGAAGTTTATCTGAGCCCAGATCTCAGTAGCCAG...ATTCTGATCTAGCAAAATAATGAACACCCACTTGCTGGTAGACACAGCTGAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp TACGTTTACGTCGTCATTTATTCCACAGAGTCAAGACCAATATTCTGCCAAAAATGGGTGTACTGTTGGTaGCTGACTCCCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: YVYVVIYSTESRPIFCQKWVYCW*LTPLEV
Trigger: GACCTCCAGGGGAGTCAGCCACCAACAGTACACCCA...TTTTTGGCAGAATATTGGTCTTGACTCTGTGGAATAAATGACGACGTAAACGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
3UTR CAA 72 bp AAACTTCCTAAGGACCAGAGACTGCAAATGCAGATTTaGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGT +
Preference number: 4 (lower is better)
Translates to: KLPKDQRLQMQI*AIPFLLCLYVG
Trigger: ACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGTCCTTAGGAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTTGCCCTTTCTTTGAATaGAGACAATGTACACATAGG +
Preference number: 4 (lower is better)
Translates to: HLIALLLLEVRPSLLVLICPFFE*RQCTHR
Trigger: CCTATGTGTACATTGTCTTCATTCAAAGAAAGGGCA...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp CATCTGATTGCCTTACTACTTCTAGAAGTGAGGCCCTCACTCCTGGTGCTGATTTTTGTACTTCTGCTGTaGGATTCCCTAGTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: HLIALLLLEVRPSLLVLIFVLLL*DSLVSK
Trigger: TTTTGACACTAGGGAATCTCACAGCAGAAGTACAAA...AATCAGCACCAGGAGTGAGGGCCTCACTTCTAGAAGTAGTAAGGCAATCAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp AGAAGTGAGGCCCTCACTCCTGGTGCTGATTTTCAAAACTTCCTAAGGACCAGAATACATTTCAGACTTTaGTGGGAAGCAGAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: RSEALTPGADFQNFLRTRIHFRL*WEAEAR
Trigger: TCTTGCTTCTGCTTCCCAGCAAAGTCTGAAATGTAT...TCTGGTCCTTAGGAAGTTTTGAAAATCAGCACCAGGAGTGAGGGCCTCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp GTAAGTGAGCTCTCCCAACAGAGAATGAGGTTACTAAAGATCACAGCAGCTGCACTAAGGACCAGAGACTaGAAATGCAGATTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VSELSQQRMRLLKITAAALRTRD*KCRFWQ
Trigger: TTGCCAAAATCTGCATTTGCAGTCTCTGGTCCTTAG...TGCAGCTGCTGTGATCTTTAGTAACCTCATTCTCTGTTGGGAGAGCTCACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp GGACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTACTGACAATTATCAGATaGAGGTGGGTAGTAATTGGT +
Preference number: 4 (lower is better)
Translates to: GPETANADFGNPFPAVSLLTIIR*RWVVIG
Trigger: ACCAATTACTACCCACCTCCATCTGATAATTGTCAG...TAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp ACCTTTCAGTCATCACCCAATTTAATTAGCCATTTGCATGATGCTTTCACACACGTGCTATACGCACTCTaGTATACAGCATGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: TFQSSPNLISHLHDAFTHVLYAL*YTACLP
Trigger: GGGCAAGCATGCTGTATATCAGAGTGCGTATAGCAC...GTGTGTGAAAGCATCATGCAAATGGCTAATTAAATTGGGTGATGACTGAAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455100.2
CDS-3UTR TCA 90 bp GTAAGTGAGCTCTCCCAACAGAGAATGAGGTTACTAAAGATCACAGCAGCTGCATGCCCTTTCTTTGAATaGAGACAATGTACACATAGG +
Preference number: 4 (lower is better)
Translates to: VSELSQQRMRLLKITAAACPFFE*RQCTHR
Trigger: CCTATGTGTACATTGTCTTCATTCAAAGAAAGGGCA...TGCAGCTGCTGTGATCTTTAGTAACCTCATTCTCTGTTGGGAGAGCTCACTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGATACATTTCAGACTTTaGTGGGAAGCAGAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMIHFRL*WEAEAR
Trigger: TCTTGCTTCTGCTTCCCAGCAAAGTCTGAAATGTAT...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp AAATCAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGATGATCATGTTTTTGTaGCAGATGCAGTTAGCGATC +
Preference number: 4 (lower is better)
Translates to: KSAATERLVPFRQIHWKGMIMFL*QMQLAI
Trigger: GATCGCTAACTGCATCTGGCACAAAAACATGATCAT...CCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGGTCAGTTCTCTGCCTTaGTTTATTAAATTAGCACTT +
Preference number: 4 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLVSSLP*FIKLAL
Trigger: AAGTGCTAATTTAATAAAGCAAGGCAGAGAACTGAC...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp ACCTTTCAGTCATCACCCAATTTAATTAGCCATTTGCATGATGCTTTCACACACTATTTACCACTTGCCTaGGTCTGGGCCACAGACTGT +
Preference number: 4 (lower is better)
Translates to: TFQSSPNLISHLHDAFTHYLPLA*VWATDC
Trigger: ACAGTCTGTGGCCCAGACCCAGGCAAGTGGTAAATA...GTGTGTGAAAGCATCATGCAAATGGCTAATTAAATTGGGTGATGACTGAAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455100.2
CDS-3UTR CCA 90 bp GTAAGTGAGCTCTCCCAACAGAGAATGAGGTTACTAAAGATCACAGCAGCTGCAAGTGCTGTTTGTATTTaGAAGCTAAGCTTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: VSELSQQRMRLLKITAAASAVCI*KLSFCQ
Trigger: CTGACAGAAGCTTAGCTTCCAAATACAAACAGCACT...TGCAGCTGCTGTGATCTTTAGTAACCTCATTCTCTGTTGGGAGAGCTCACTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CCA 90 bp ACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGCTGACAATTATCAGATaGAGGTGGGTAGTAATTGGT +
Preference number: 4 (lower is better)
Translates to: TRDCKCRFWQSLSCCVSMLTIIR*RWVVIG
Trigger: ACCAATTACTACCCACCTCCATCTGATAATTGTCAG...CATAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp ATCAGATGGAGGTGGGTAGTAATTGGTACTTCGTGCCTTGCTAAAATTATTTTAGCATTGGCTCTTCTTTaGAAGGACTCACCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: IRWRWVVIGTSCLAKIILALALL*KDSPPN
Trigger: ATTTGGGGGTGAGTCCTTTCAAAGAAGAGCCAATGC...TAAAATAATTTTAGCAAGGCACGAAGTACCAATTACTACCCACCTCCATCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp ATCAGATGGAGGTGGGTAGTAATTGGTACTTCGTGCCTTGCTAAAATTATTTTAAGTCTGCCATTAAGTTaGAGAGTAAGTGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: IRWRWVVIGTSCLAKIILSLPLS*RVSELS
Trigger: GGAGAGCTCACTTACTCTTCAACTTAATGGCAGACT...TAAAATAATTTTAGCAAGGCACGAAGTACCAATTACTACCCACCTCCATCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp TACGTTTACGTCGTCATTTATTCCACAGAGTCAAGACCAATATTCTGCCAAAAAGATATACAGCATGCTTaGCCTGTGGATCTTTTCTAC +
Preference number: 4 (lower is better)
Translates to: YVYVVIYSTESRPIFCQKDIQHA*PVDLFY
Trigger: GTAGAAAAGATCCACAGGGCAAGCATGCTGTATATC...TTTTTGGCAGAATATTGGTCTTGACTCTGTGGAATAAATGACGACGTAAACGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR TCA 90 bp AATCCTAAATTTTTCTTACCAGGTAGAAAGATGGGAGGGAAGCACCTTGCTATTGCTTTCACACACAATTaGTTCAAGCATTATACAGGA +
Preference number: 4 (lower is better)
Translates to: NPKFFLPGRKMGGKHLAIAFTHN*FKHYTG
Trigger: TCCTGTATAATGCTTGAATCAATTGTGTGTGAAAGC...AATAGCAAGGTGCTTCCCTCCCATCTTTCTACCTGGTAAGAAAAATTTAGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR GCA 90 bp ACCTTTCAGTCATCACCCAATTTAATTAGCCATTTGCATGATGCTTTCACACACGTCAGTTCTCTGCCTTaGTTTATTAAATTAGCACTT +
Preference number: 4 (lower is better)
Translates to: TFQSSPNLISHLHDAFTHVSSLP*FIKLAL
Trigger: AAGTGCTAATTTAATAAAGCAAGGCAGAGAACTGAC...GTGTGTGAAAGCATCATGCAAATGGCTAATTAAATTGGGTGATGACTGAAAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455100.2
CDS GCA 90 bp CACCAACGGGTAGGGCTCCAGCGTGCGGCCGCGCGCCCGAAAGGCTaGGGAGCCGTGGGCGCCGTCCCGCAGGACCCTGTGGTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: HQRVGLQRAAARPKG*GAVGAVPQDPVVGL
Trigger: CAGCCCAACCACAGGGTCCTGCGGGACGGCGCCCACGGCTCCGCAGCCTTTCGGGCGCGCGGCCGCACGCTGGAGCCCTACCCGTTGGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS GCA 90 bp GGATGTTGTGCTCCCCCGCGATCACCAACGGGTAGGGCTCCAGCGTaGGGCCGCGCGCCCGAAAGGCTGCGGAGCCGTGGGCGCCGTCCC +
Preference number: 5 (lower is better)
Translates to: GCCAPPRSPTGRAPA*GRAPERLRSRGRRP
Trigger: GGGACGGCGCCCACGGCTCCGCAGCCTTTCGGGCGCGCGGCCGCACGCTGGAGCCCTACCCGTTGGTGATCGCGGGGGAGCACAACATCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS GCA 90 bp GCTGTACACGAAGCACTGCACCGCGGTGGGCGCTGGCGGCTCCTCTaGGCCCGGGGCCCGGTCCTCCAGCAGCTGTACCCGCAGCACCGT +
Preference number: 5 (lower is better)
Translates to: AVHEALHRGGRWRLL*ARGPVLQQLYPQHR
Trigger: ACGGTGCTGCGGGTACAGCTGCTGGAGGACCGGGCCCCGGGCGCAGAGGAGCCGCCAGCGCCCACCGCGGTGCAGTGCTTCGTGTACAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS CCA 90 bp GAAGGTGGCCCTGCTGTACACGAAGCACTGCACCGCGGTGGGCGCTaGCGGCTCCTCTGCGCCCGGGGCCCGGTCCTCCAGCAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: EGGPAVHEALHRGGR*RLLCARGPVLQQLY
Trigger: GTACAGCTGCTGGAGGACCGGGCCCCGGGCGCAGAGGAGCCGCCAGCGCCCACCGCGGTGCAGTGCTTCGTGTACAGCAGGGCCACCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS TCA 90 bp GCTGCGGAGCCGTGGGCGCCGTCCCGCAGGACCCTGTGGTTGGGCTaGCCCCGCTTCAGGGTGCCGTACACGAAGACTAGGGCCATCCGG +
Preference number: 5 (lower is better)
Translates to: AAEPWAPSRRTLWLG*PRFRVPYTKTRAIR
Trigger: CCGGATGGCCCTAGTCTTCGTGTACGGCACCCTGAAGCGGGGTCAGCCCAACCACAGGGTCCTGCGGGACGGCGCCCACGGCTCCGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000467518.5
ENST00000492399.5
ENST00000683975.1
CDS GCA 90 bp TGTCATGGTGCGGGAGCTGGGCCCACTCCGGCGGGAAGGTGGCCCTaGTGTACACGAAGCACTGCACCGCGGTGGGCGCTGGCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: CHGAGAGPTPAGRWP*CTRSTAPRWALAAP
Trigger: AGGAGCCGCCAGCGCCCACCGCGGTGCAGTGCTTCGTGTACAGCAGGGCCACCTTCCCGCCGGAGTGGGCCCAGCTCCCGCACCATGACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS CCA 90 bp CGTAGCTGTCATGGTGCGGGAGCTGGGCCCACTCCGGCGGGAAGGTaGCCCTGCTGTACACGAAGCACTGCACCGCGGTGGGCGCTGGCG +
Preference number: 5 (lower is better)
Translates to: RSCHGAGAGPTPAGR*PCCTRSTAPRWALA
Trigger: CGCCAGCGCCCACCGCGGTGCAGTGCTTCGTGTACAGCAGGGCCACCTTCCCGCCGGAGTGGGCCCAGCTCCCGCACCATGACAGCTACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS CCA 90 bp GAAAGGCTGCGGAGCCGTGGGCGCCGTCCCGCAGGACCCTGTGGTTaGGCTGACCCCGCTTCAGGGTGCCGTACACGAAGACTAGGGCCA +
Preference number: 5 (lower is better)
Translates to: ERLRSRGRRPAGPCG*ADPASGCRTRRLGP
Trigger: TGGCCCTAGTCTTCGTGTACGGCACCCTGAAGCGGGGTCAGCCCAACCACAGGGTCCTGCGGGACGGCGCCCACGGCTCCGCAGCCTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000467518.5
ENST00000492399.5
ENST00000683975.1
CDS CCA 90 bp CCCGGGGCCCGGTCCTCCAGCAGCTGTACCCGCAGCACCGTGCGCTaGTACAGGGCCGGGCAACTCTCGAAGTCATCCAGAAAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: PGARSSSSCTRSTVR*YRAGQLSKSSRKRS
Trigger: GCTGCGCTTTCTGGATGACTTCGAGAGTTGCCCGGCCCTGTACCAGCGCACGGTGCTGCGGGTACAGCTGCTGGAGGACCGGGCCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS GCA 90 bp CGCCGTCCCGCAGGACCCTGTGGTTGGGCTGACCCCGCTTCAGGGTaGCGTACACGAAGACTAGGGCCATCCGGGCAGAGCTGCTATCCA +
Preference number: 5 (lower is better)
Translates to: RRPAGPCGWADPASG*RTRRLGPSGQSCYP
Trigger: TGGATAGCAGCTCTGCCCGGATGGCCCTAGTCTTCGTGTACGGCACCCTGAAGCGGGGTCAGCCCAACCACAGGGTCCTGCGGGACGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS GCA 90 bp CGCCGTCCCGCAGGACCCTGTGGTTGGGCTGACCCCGCTTCAGGGTaGCGTACACGAAGACTAGGGCCATCCGGGCAGAGCTTACTGTTC +
Preference number: 5 (lower is better)
Translates to: RRPAGPCGWADPASG*RTRRLGPSGQSLLF
Trigger: GAACAGTAAGCTCTGCCCGGATGGCCCTAGTCTTCGTGTACGGCACCCTGAAGCGGGGTCAGCCCAACCACAGGGTCCTGCGGGACGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464500.5
ENST00000467518.5
CDS GCA 90 bp CGCCGTCCCGCAGGACCCTGTGGTTGGGCTGACCCCGCTTCAGGGTaGCGTACACGAAGACTAGGGCCATCCGGGCAGAGCTGTAAGCTT +
Preference number: 5 (lower is better)
Translates to: RRPAGPCGWADPASG*RTRRLGPSGQSCKL
Trigger: AAGCTTACAGCTCTGCCCGGATGGCCCTAGTCTTCGTGTACGGCACCCTGAAGCGGGGTCAGCCCAACCACAGGGTCCTGCGGGACGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471912.1
ENST00000492399.5
ENST00000683975.1
CDS GCA 90 bp GGCAGAGCTTACTGTTCTCAGCCCTTGTGTGGTGGGCGCGGAGGTTaGGGAGGTTCCAGGCAAGGCCGCCACCCTCTAGAGCTGCTGATC +
Preference number: 5 (lower is better)
Translates to: GRAYCSQPLCGGRGG*GGSRQGRHPLELLI
Trigger: GATCAGCAGCTCTAGAGGGTGGCGGCCTTGCCTGGAACCTCCGCAACCTCCGCGCCCACCACACAAGGGCTGAGAACAGTAAGCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464500.5
ENST00000467518.5
CDS CCA 90 bp AGGTCCTGGCAGTCTGACGCAGCGGAGCTCAGCACCCACACCTTCTaGTGTTTCCCCTTCCAAGGTCTTAGAGGGCAGTGGTGCTTCACG +
Preference number: 5 (lower is better)
Translates to: RSWQSDAAELSTHTF*CFPFQGLRGQWCFT
Trigger: CGTGAAGCACCACTGCCCTCTAAGACCTTGGAAGGGGAAACACCAGAAGGTGTGGGTGCTGAGCTCCGCTGCGTCAGACTGCCAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp TGTTCGGCTTCCGCCTTCACCCAGCATGGGCTGGGCGCATCTTGGAGCCCCAGGGTAAATATTTACCACTaGCCTGGGTCTGGGCCACAG +
Preference number: 5 (lower is better)
Translates to: CSASAFTQHGLGASWSPRVNIYH*PGSGPQ
Trigger: CTGTGGCCCAGACCCAGGCAAGTGGTAAATATTTAC...CCTGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGAAGGCGGAAGCCGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp TTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCTTTCCGGCAGATTCATaGGAAAGGGCCCTGTTCGGC +
Preference number: 5 (lower is better)
Translates to: LRMSALPGPFPIAQARAVFPADS*ERALFG
Trigger: GCCGAACAGGGCCCTTTCCAATGAATCTGCCGGAAA...GACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp CAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGCCCTTGGGCTGGGCGCATCTaGGAGCCCCAGGGCTCTCAA +
Preference number: 5 (lower is better)
Translates to: QLPLKDWFLSGRFIGKGPWAGRI*EPQGSQ
Trigger: TTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCCA...AGGGCCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS CCA 90 bp GTCTTAGAGGGCAGTGGTGCTTCACGGGACTCCCCGCAGCGATCTTaGCTCCAGCGTGAAGGTAAATATTTACCACTTGCCTGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: VLEGSGASRDSPQRS*LQREGKYLPLAWVW
Trigger: CCAGACCCAGGCAAGTGGTAAATATTTACCTTCACGCTGGAGCCAAGATCGCTGCGGGGAGTCCCGTGAAGCACCACTGCCCTCTAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS CCA 90 bp TGCGGAGGTTCCAGGCAAGGCCGCCACCCTCTAGAGCTGCTGATCTaGGAAAAGGCGCTCCTTGTATTAGGACAGTCTGTCAAACCTGTC +
Preference number: 5 (lower is better)
Translates to: CGGSRQGRHPLELLI*EKALLVLGQSVKPV
Trigger: GACAGGTTTGACAGACTGTCCTAATACAAGGAGCGCCTTTTCCCAGATCAGCAGCTCTAGAGGGTGGCGGCCTTGCCTGGAACCTCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464500.5
CDS-3UTR CAA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGAGCAGCCACGGGATGTaGTGCTCCCCCGCGATCACC +
Preference number: 5 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLSSHGM*CSPAIT
Trigger: GGTGATCGCGGGGGAGCACAACATCCCGTGGCTGCT...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp ATTCTACCCAGCCGTGTAAAATCGGCTTTCTCAGGGGTTACAGGCCAGAATCAGAGCAGCCACGGGATGTaGTGCTCCCCCGCGATCACC +
Preference number: 5 (lower is better)
Translates to: ILPSRVKSAFSGVTGQNQSSHGM*CSPAIT
Trigger: GGTGATCGCGGGGGAGCACAACATCCCGTGGCTGCT...CTGATTCTGGCCTGTAACCCCTGAGAAAGCCGATTTTACACGGCTGGGTAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp CCTTCACCCAGCATGGGCTGGGCGCATCTTGGAGCCCCAGGGCTCTCAAACCTATGGGAGGGAAGCACCTaGCTATTCGTATCTCAACAT +
Preference number: 5 (lower is better)
Translates to: PSPSMGWAHLGAPGLSNLWEGST*LFVSQH
Trigger: ATGTTGAGATACGAATAGCAAGGTGCTTCCCTCCCA...TAGGTTTGAGAGCCCTGGGGCTCCAAGATGCGCCCAGCCCATGCTGGGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp TTGAGGATGAGCGCGCTGCCTGGTCCCTTCCCCATTGCACAAGCCAGGGCAGTCCTGTTTTTGTTTGTTTaGAGGATGAGCGCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: LRMSALPGPFPIAQARAVLFLFV*RMSALP
Trigger: AGGCAGCGCGCTCATCCTCAAAACAAACAAAAACAG...GACTGCCCTGGCTTGTGCAATGGGGAAGGGACCAGGCAGCGCGCTCATCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp TGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGACTCCCCTGGAGGTCACCCTGTGGGAGGGAAGCACCTaGCTATTCGTATCTCAACAT +
Preference number: 5 (lower is better)
Translates to: CVSMWVYCWWLTPLEVTLWEGST*LFVSQH
Trigger: ATGTTGAGATACGAATAGCAAGGTGCTTCCCTCCCA...CAGGGTGACCTCCAGGGGAGTCAGCCACCAACAGTACACCCACATAGAGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp CGCTCAGCTGTGTCTACCAGCAAGTGGGTGTTCATTATTTTGCTAGATCAGAATCCTGAAGCTTCCTGGTaGGCCGGGGGTGCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RSAVSTSKWVFIILLDQNPEASW*AGGAVS
Trigger: GGAGACAGCACCCCCGGCCAACCAGGAAGCTTCAGG...ATTCTGATCTAGCAAAATAATGAACACCCACTTGCTGGTAGACACAGCTGAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGGCTGCCACTGAAAGATaGGTTCCTTTCCGGCAGATT +
Preference number: 5 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLAATER*VPFRQI
Trigger: AATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGC...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp GGACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTAGTAAATATTTACCACTaGCCTGGGTCTGGGCCACAG +
Preference number: 5 (lower is better)
Translates to: GPETANADFGNPFPAVSLVNIYH*PGSGPQ
Trigger: CTGTGGCCCAGACCCAGGCAAGTGGTAAATATTTAC...TAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp TTTTGGCAATCCCTTTCCTGCTGTGTCTCTATGTGGGTGTACTGTTGGTGGCTGTGCATTGGCTCTTCTTaGAAAGGACTCACCCCCAAA +
Preference number: 5 (lower is better)
Translates to: FWQSLSCCVSMWVYCWWLCIGSS*KGLTPK
Trigger: TTTGGGGGTGAGTCCTTTCAAAGAAGAGCCAATGCA...CAGCCACCAACAGTACACCCACATAGAGACACAGCAGGAAAGGGATTGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS CCA 90 bp CAGCGATCTTGGCTCCAGCGTGAAGGTAAATATTTACCACTTGCCTaGGTCTGGGCCACAGACTGTTACATAAAGACAGAAGTGATTTGT +
Preference number: 5 (lower is better)
Translates to: QRSWLQREGKYLPLA*VWATDCYIKTEVIC
Trigger: ACAAATCACTTCTGTCTTTATGTAACAGTCTGTGGCCCAGACCCAGGCAAGTGGTAAATATTTACCTTCACGCTGGAGCCAAGATCGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455100.2
CDS-3UTR CAA 90 bp GTAAGTGAGCTCTCCCAACAGAGAATGAGGTTACTAAAGATCACAGCAGCTGCACTGTTTTTGTTTGTTTaGAGGATGAGCGCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: VSELSQQRMRLLKITAAALFLFV*RMSALP
Trigger: AGGCAGCGCGCTCATCCTCAAAACAAACAAAAACAG...TGCAGCTGCTGTGATCTTTAGTAACCTCATTCTCTGTTGGGAGAGCTCACTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp ACCTTTCAGTCATCACCCAATTTAATTAGCCATTTGCATGATGCTTTCACACACTTTCCGGCAGATTCATaGGAAAGGGCCCTGTTCGGC +
Preference number: 5 (lower is better)
Translates to: TFQSSPNLISHLHDAFTHFPADS*ERALFG
Trigger: GCCGAACAGGGCCCTTTCCAATGAATCTGCCGGAAA...GTGTGTGAAAGCATCATGCAAATGGCTAATTAAATTGGGTGATGACTGAAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455100.2
CDS-3UTR CAA 90 bp ATTCTACCCAGCCGTGTAAAATCGGCTTTCTCAGGGGTTACAGGCCAGAATCAGATAATGATCATGTTTTaGTGCCAGATGCAGTTAGCG +
Preference number: 5 (lower is better)
Translates to: ILPSRVKSAFSGVTGQNQIMIMF*CQMQLA
Trigger: CGCTAACTGCATCTGGCACAAAAACATGATCATTAT...CTGATTCTGGCCTGTAACCCCTGAGAAAGCCGATTTTACACGGCTGGGTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp CAGCTGCCACTGAAAGATTGGTTCCTTTCCGGCAGATTCATTGGAAAGGGCCCTTGCTTTCACACACAATaGATTCAAGCATTATACAGG +
Preference number: 5 (lower is better)
Translates to: QLPLKDWFLSGRFIGKGPCFHTQ*IQALYR
Trigger: CCTGTATAATGCTTGAATCAATTGTGTGTGAAAGCA...AGGGCCCTTTCCAATGAATCTGCCGGAAAGGAACCAATCTTTCAGTGGCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS TCA 90 bp AATACTCTTAAAATGAAACTGTGGCCGAAGGAGACAATGGAAGGATaGCATCACCTCTTCCCTAGCTCCAGGACTAATTTAAGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: NTLKMKLWPKETMEG*HHLFPSSRTNLSPR
Trigger: TCTGGGGCTTAAATTAGTCCTGGAGCTAGGGAAGAGGTGATGTCATCCTTCCATTGTCTCCTTCGGCCACAGTTTCATTTTAAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492399.5
CDS-3UTR CAA 90 bp AATCCTAAATTTTTCTTACCAGGTAGAAAGATGGGAGGGAAGCACCTTGCTATTCAGATAAACTTCCACTaGAAGTCCGGGCGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: NPKFFLPGRKMGGKHLAIQINFH*KSGRSA
Trigger: AGCTGAGCGCCCGGACTTCAAGTGGAAGTTTATCTG...AATAGCAAGGTGCTTCCCTCCCATCTTTCTACCTGGTAAGAAAAATTTAGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp GGACCAGAGACTGCAAATGCAGATTTTGGCAATCCCTTTCCTGCTGTGTCTCTAATAATGATCATGTTTTaGTGCCAGATGCAGTTAGCG +
Preference number: 5 (lower is better)
Translates to: GPETANADFGNPFPAVSLIMIMF*CQMQLA
Trigger: CGCTAACTGCATCTGGCACAAAAACATGATCATTAT...TAGAGACACAGCAGGAAAGGGATTGCCAAAATCTGCATTTGCAGTCTCTGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp ATTCTACCCAGCCGTGTAAAATCGGCTTTCTCAGGGGTTACAGGCCAGAATCAGTGCTTTCACACACAATaGATTCAAGCATTATACAGG +
Preference number: 5 (lower is better)
Translates to: ILPSRVKSAFSGVTGQNQCFHTQ*IQALYR
Trigger: CCTGTATAATGCTTGAATCAATTGTGTGTGAAAGCA...CTGATTCTGGCCTGTAACCCCTGAGAAAGCCGATTTTACACGGCTGGGTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS-3UTR CAA 90 bp ATCAGATGGAGGTGGGTAGTAATTGGTACTTCGTGCCTTGCTAAAATTATTTTATGCATTGGCTCTTCTTaGAAAGGACTCACCCCCAAA +
Preference number: 5 (lower is better)
Translates to: IRWRWVVIGTSCLAKIILCIGSS*KGLTPK
Trigger: TTTGGGGGTGAGTCCTTTCAAAGAAGAGCCAATGCA...TAAAATAATTTTAGCAAGGCACGAAGTACCAATTACTACCCACCTCCATCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS GCA 72 bp GTAGGGCTCCAGCGTGCGGCCGCGCGCCCGAAAGGCTaGGGAGCCGTGGGCGCCGTCCCGCAGGACCCTGTG +
Preference number: 6 (lower is better)
Translates to: VGLQRAAARPKG*GAVGAVPQDPV
Trigger: CACAGGGTCCTGCGGGACGGCGCCCACGGCTCCGCAGCCTTTCGGGCGCGCGGCCGCACGCTGGAGCCCTAC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS GCA 72 bp GCTCCCCCGCGATCACCAACGGGTAGGGCTCCAGCGTaGGGCCGCGCGCCCGAAAGGCTGCGGAGCCGTGGG +
Preference number: 6 (lower is better)
Translates to: APPRSPTGRAPA*GRAPERLRSRG
Trigger: CCCACGGCTCCGCAGCCTTTCGGGCGCGCGGCCGCACGCTGGAGCCCTACCCGTTGGTGATCGCGGGGGAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS CCA 72 bp CCTGCTGTACACGAAGCACTGCACCGCGGTGGGCGCTaGCGGCTCCTCTGCGCCCGGGGCCCGGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: PAVHEALHRGGR*RLLCARGPVLQ
Trigger: CTGGAGGACCGGGCCCCGGGCGCAGAGGAGCCGCCAGCGCCCACCGCGGTGCAGTGCTTCGTGTACAGCAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS GCA 72 bp ACCTCGCCCTCCACGAGGCGCCCCGAGCCGGGCAGGTaGAGCAGCCACGGGATGTTGTGCTCCCCCGCGATC +
Preference number: 6 (lower is better)
Translates to: TSPSTRRPEPGR*SSHGMLCSPAI
Trigger: GATCGCGGGGGAGCACAACATCCCGTGGCTGCTGCACCTGCCCGGCTCGGGGCGCCTCGTGGAGGGCGAGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS GCA 72 bp TCCGGCGGGAAGGTGGCCCTGCTGTACACGAAGCACTaGACCGCGGTGGGCGCTGGCGGCTCCTCTGCGCCC +
Preference number: 6 (lower is better)
Translates to: SGGKVALLYTKH*TAVGAGGSSAP
Trigger: GGGCGCAGAGGAGCCGCCAGCGCCCACCGCGGTGCAGTGCTTCGTGTACAGCAGGGCCACCTTCCCGCCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS GCA 72 bp GCGGGAGCTGGGCCCACTCCGGCGGGAAGGTGGCCCTaGTGTACACGAAGCACTGCACCGCGGTGGGCGCTG +
Preference number: 6 (lower is better)
Translates to: AGAGPTPAGRWP*CTRSTAPRWAL
Trigger: CAGCGCCCACCGCGGTGCAGTGCTTCGTGTACAGCAGGGCCACCTTCCCGCCGGAGTGGGCCCAGCTCCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS GCA 72 bp ATATCCAGTTTTCAGTCCCGCGGGGACGCCGAGTGCTaGGGCCTCGACCCGGACGCCGCGCAGGGAGCGACG +
Preference number: 6 (lower is better)
Translates to: ISSFQSRGDAEC*GLDPDAAQGAT
Trigger: CGTCGCTCCCTGCGCGGCGTCCGGGTCGAGGCCGCAGCACTCGGCGTCCCCGCGGGACTGAAAACTGGATAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471912.1
CDS CCA 72 bp CATGGTGCGGGAGCTGGGCCCACTCCGGCGGGAAGGTaGCCCTGCTGTACACGAAGCACTGCACCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: HGAGAGPTPAGR*PCCTRSTAPRW
Trigger: CCACCGCGGTGCAGTGCTTCGTGTACAGCAGGGCCACCTTCCCGCCGGAGTGGGCCCAGCTCCCGCACCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000683975.1
CDS TCA 72 bp CCGTGGGCGCCGTCCCGCAGGACCCTGTGGTTGGGCTaGCCCCGCTTCAGGGTGCCGTACACGAAGACTAGG +
Preference number: 6 (lower is better)
Translates to: PWAPSRRTLWLG*PRFRVPYTKTR
Trigger: CCTAGTCTTCGTGTACGGCACCCTGAAGCGGGGTCAGCCCAACCACAGGGTCCTGCGGGACGGCGCCCACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000464500.5
ENST00000467518.5
ENST00000471912.1
ENST00000492399.5
ENST00000683975.1
CDS GCA 72 bp GCAGGACCCTGTGGTTGGGCTGACCCCGCTTCAGGGTaGCGTACACGAAGACTAGGGCCATCCGGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: AGPCGWADPASG*RTRRLGPSGQS
Trigger: GCTCTGCCCGGATGGCCCTAGTCTTCGTGTACGGCACCCTGAAGCGGGGTCAGCCCAACCACAGGGTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000464500.5
ENST00000467518.5
ENST00000471912.1
ENST00000492399.5
ENST00000683975.1
CDS CCA 72 bp TCCGGGCAGAGCTTACTGTTCTCAGCCCTTGTGTGGTaGGCGCGGAGGTTGCGGAGGTTCCAGGCAAGGCCG +
Preference number: 6 (lower is better)
Translates to: SGQSLLFSALVW*ARRLRRFQARP
Trigger: CGGCCTTGCCTGGAACCTCCGCAACCTCCGCGCCCACCACACAAGGGCTGAGAACAGTAAGCTCTGCCCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464500.5
ENST00000467518.5
CDS GCA 72 bp TACTGTTCTCAGCCCTTGTGTGGTGGGCGCGGAGGTTaGGGAGGTTCCAGGCAAGGCCGCCACCCTCTAGAG +
Preference number: 6 (lower is better)
Translates to: YCSQPLCGGRGG*GGSRQGRHPLE
Trigger: CTCTAGAGGGTGGCGGCCTTGCCTGGAACCTCCGCAACCTCCGCGCCCACCACACAAGGGCTGAGAACAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464500.5
ENST00000467518.5
CDS CAA 72 bp TTACTGTTCTCAGCCCTTGTGTGGTGGGCGCGGAGGTaGCGGAGGTTCCAGGCAAGGCCGCCACCCTCTAGA +
Preference number: 6 (lower is better)
Translates to: LLFSALVWWARR*RRFQARPPPSR
Trigger: TCTAGAGGGTGGCGGCCTTGCCTGGAACCTCCGCAACCTCCGCGCCCACCACACAAGGGCTGAGAACAGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464500.5
ENST00000467518.5
CDS TCA 72 bp GTTTCAGCACTGAGTTCCACTCAGGTCCTGGCAGTCTaGCGCAGCGGAGCTCAGCACCCACACCTTCTGGTG +
Preference number: 6 (lower is better)
Translates to: VSALSSTQVLAV*RSGAQHPHLLV
Trigger: CACCAGAAGGTGTGGGTGCTGAGCTCCGCTGCGTCAGACTGCCAGGACCTGAGTGGAACTCAGTGCTGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376250.6
ENST00000455100.2
ENST00000467518.5
CDS GCA 72 bp TGGTGTTTCCCCTTCCAAGGTCTTAGAGGGCAGTGGTaGTTCACGGGACTCCCCGCAGCGATCTTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: WCFPFQGLRGQW*FTGLPAAILAP
Trigger: TGGAGCCAAGATCGCTGCGGGGAGTCCCGTGAAGCACCACTGCCCTCTAAGACCTTGGAAGGGGAAACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS CCA 72 bp CAGTCTGACGCAGCGGAGCTCAGCACCCACACCTTCTaGTGTTTCCCCTTCCAAGGTCTTAGAGGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: QSDAAELSTHTF*CFPFQGLRGQW
Trigger: CCACTGCCCTCTAAGACCTTGGAAGGGGAAACACCAGAAGGTGTGGGTGCTGAGCTCCGCTGCGTCAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS CCA 72 bp TTCTGGTGTTTCCCCTTCCAAGGTCTTAGAGGGCAGTaGTGCTTCACGGGACTCCCCGCAGCGATCTTGGCT +
Preference number: 6 (lower is better)
Translates to: FWCFPFQGLRGQ*CFTGLPAAILA
Trigger: AGCCAAGATCGCTGCGGGGAGTCCCGTGAAGCACCACTGCCCTCTAAGACCTTGGAAGGGGAAACACCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS CCA 72 bp GGCAGTGGTGCTTCACGGGACTCCCCGCAGCGATCTTaGCTCCAGCGTGAAGGTAAATATTTACCACTTGCC +
Preference number: 6 (lower is better)
Translates to: GSGASRDSPQRS*LQREGKYLPLA
Trigger: GGCAAGTGGTAAATATTTACCTTCACGCTGGAGCCAAGATCGCTGCGGGGAGTCCCGTGAAGCACCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376250.6
ENST00000455100.2
CDS CCA 72 bp TCCAGGCAAGGCCGCCACCCTCTAGAGCTGCTGATCTaGGAAAAGGCGCTCCTTGTATTAGGACAGTCTGTC +
Preference number: 6 (lower is better)
Translates to: SRQGRHPLELLI*EKALLVLGQSV
Trigger: GACAGACTGTCCTAATACAAGGAGCGCCTTTTCCCAGATCAGCAGCTCTAGAGGGTGGCGGCCTTGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464500.5
CDS CAA 90 bp CCCCGCAGCGATCTTGGCTCCAGCGTGAAGGTAAATATTTACCACTaGCCTGGGTCTGGGCCACAGACTGTAAGCTTGTTTCTTCAAGGA +
Preference number: 6 (lower is better)
Translates to: PRSDLGSSVKVNIYH*PGSGPQTVSLFLQG
Trigger: TCCTTGAAGAAACAAGCTTACAGTCTGTGGCCCAGACCCAGGCAAGTGGTAAATATTTACCTTCACGCTGGAGCCAAGATCGCTGCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376250.6
CDS CCA 72 bp TGGCTCCAGCGTGAAGGTAAATATTTACCACTTGCCTaGGTCTGGGCCACAGACTGTAAGCTTGTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: WLQREGKYLPLA*VWATDCKLVSS
Trigger: TGAAGAAACAAGCTTACAGTCTGTGGCCCAGACCCAGGCAAGTGGTAAATATTTACCTTCACGCTGGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376250.6
CDS CAA 72 bp GATCTTGGCTCCAGCGTGAAGGTAAATATTTACCACTaGCCTGGGTCTGGGCCACAGACTGTAAGCTTGTTT +
Preference number: 6 (lower is better)
Translates to: DLGSSVKVNIYH*PGSGPQTVSLF
Trigger: AAACAAGCTTACAGTCTGTGGCCCAGACCCAGGCAAGTGGTAAATATTTACCTTCACGCTGGAGCCAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376250.6
CDS CCA 72 bp TGGCTCCAGCGTGAAGGTAAATATTTACCACTTGCCTaGGTCTGGGCCACAGACTGTTACATAAAGACAGAA +
Preference number: 6 (lower is better)
Translates to: WLQREGKYLPLA*VWATDCYIKTE
Trigger: TTCTGTCTTTATGTAACAGTCTGTGGCCCAGACCCAGGCAAGTGGTAAATATTTACCTTCACGCTGGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455100.2
CDS TCA 72 bp AAAATGAAACTGTGGCCGAAGGAGACAATGGAAGGATaGCATCACCTCTTCCCTAGCTCCAGGACTAATTTA +
Preference number: 6 (lower is better)
Translates to: KMKLWPKETMEG*HHLFPSSRTNL
Trigger: TAAATTAGTCCTGGAGCTAGGGAAGAGGTGATGTCATCCTTCCATTGTCTCCTTCGGCCACAGTTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492399.5
CDS TCA 72 bp ACCAAATATCCAGTTTTCAGTCCAATACTCTTAAAATaGAACTGTGGCCGAAGGAGACAATGGAAGGATGAC +
Preference number: 6 (lower is better)
Translates to: TKYPVFSPILLK*NCGRRRQWKDD
Trigger: GTCATCCTTCCATTGTCTCCTTCGGCCACAGTTTCATTTTAAGAGTATTGGACTGAAAACTGGATATTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492399.5