RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GGA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000125447

Ensembl transcript IDs: ENST00000537686.6, ENST00000538886.5, ENST00000577435.5, ENST00000578208.1, ENST00000578348.5, ENST00000578773.1, ENST00000578896.1, ENST00000579743.2, ENST00000580646.5, ENST00000582232.1, ENST00000582376.1, ENST00000582486.5, ENST00000582717.5, ENST00000582821.5, ENST00000583282.5, ENST00000584243.5, ENST00000584550.1, ENST00000613421.4, ENST00000614198.4, ENST00000621217.4, ENST00000621870.4, ENST00000649398.1

Found 1513 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCGGCAGTGGAGCTTGGGAGCTGCTTGAGGAGGGGGCTGAGGGCTaGAGCAGAGGAGCATCGGAGGCGCCACAGGCAGCGGTCCCCGGC +
Preference number: 1 (lower is better)
Translates to: GGSGAWELLEEGAEG*SRGASEAPQAAVPG
Trigger: GCCGGGGACCGCTGCCTGTGGCGCCTCCGATGCTCCTCTGCTCCAGCCCTCAGCCCCCTCCTCAAGCAGCTCCCAAGCTCCACTGCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR TCA 90 bp GAGGAGCATCGGAGGCGCCACAGGCAGCGGTCCCCGGCCTGGGGCTaGAGAAGTCCAGGTCGGACTGTTCCCTCTGGAGCAGGTGCCACT +
Preference number: 1 (lower is better)
Translates to: EEHRRRHRQRSPAWG*RSPGRTVPSGAGAT
Trigger: AGTGGCACCTGCTCCAGAGGGAACAGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGACCGCTGCCTGTGGCGCCTCCGATGCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CCA 90 bp AGGGCATCCAGGTGGTGCAGCGCGCTGTTGCCCAACGCCAAGCCATaGTGCCCAGGGACTGCGGGCTCAACTTTTGGGGCCAAGGCTGGG +
Preference number: 1 (lower is better)
Translates to: RASRWCSALLPNAKP*CPGTAGSTFGAKAG
Trigger: CCCAGCCTTGGCCCCAAAAGTTGAGCCCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR TCA 90 bp AGGCAGAGTCCACCGGGAGGATGGCCCTGGGGCCCTCAGGGTCGCTaGACTTCACTGAGTACCTCCAACTCAGGGTTCTTTGCCCACCCC +
Preference number: 1 (lower is better)
Translates to: RQSPPGGWPWGPQGR*TSLSTSNSGFFAHP
Trigger: GGGGTGGGCAAAGAACCCTGAGTTGGAGGTACTCAGTGAAGTTCAGCGACCCTGAGGGCCCCAGGGCCATCCTCCCGGTGGACTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621217.4
3UTR CCA 90 bp GCCAGTTCCTTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTaGGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTG +
Preference number: 1 (lower is better)
Translates to: ASSLFWARHLPGPPP*GWQQELVGGGSMEL
Trigger: CAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR CCA 90 bp GACTTTGCAGTATGCCAGTTCCTTATTCTGGGCCAGGCACCTTCCTaGGCCACCTCCCTGGGGATGGCAGCAGGAGCTGGTTGGCGGGGG +
Preference number: 1 (lower is better)
Translates to: DFAVCQFLILGQAPS*ATSLGMAAGAGWRG
Trigger: CCCCCGCCAACCAGCTCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGCATACTGCAAAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR TCA 90 bp GTCGGACTGTTCCCTCTGGAGCAGGTGCCACTGGCTGTTCCCAGCTaGCTCTTTGGGAGGAACATTAGGGGCTGGGTCGGCGAGGCCCAA +
Preference number: 1 (lower is better)
Translates to: VGLFPLEQVPLAVPS*LFGRNIRGWVGEAQ
Trigger: TTGGGCCTCGCCGACCCAGCCCCTAATGTTCCTCCCAAAGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCAGAGGGAACAGTCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR GCA 90 bp CAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTaGAGCCCCTTGGGCCGTGCATCTGTCAGGTGTGAGGATGTGGCT +
Preference number: 1 (lower is better)
Translates to: QQELVGGGSMELQQG*SPLGRASVRCEDVA
Trigger: AGCCACATCCTCACACCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR GCA 90 bp CTTCTAGAAGCTGATCGAGGGCATCCAGGTGGTGCAGCGCGCTGTTaGCCAACGCCAAGCCATGGTGCCCAGGGACTGCGGGCTCAACTT +
Preference number: 1 (lower is better)
Translates to: LLEADRGHPGGAARC*PTPSHGAQGLRAQL
Trigger: AAGTTGAGCCCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGATCAGCTTCTAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CCA 90 bp CACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTaGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGGGA +
Preference number: 1 (lower is better)
Translates to: HSLPLPGTSTQLITP*PFQDDAVHQRQGWG
Trigger: TCCCCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CCA 90 bp GAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTaGCTTCAAGGTGGAGATCACAGCGTCCTCTGGGGTCATAGGTTC +
Preference number: 1 (lower is better)
Translates to: ESDGTRALLVSGQPA*LQGGDHSVLWGHRF
Trigger: GAACCTATGACCCCAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR TCA 90 bp CACCGGGAGGATGGCCCTGGGGCCCTCAGGGTCGCTGAACTTCACTaGGTACCTCCAACTCAGGGTTCTTTGCCCACCCCAACAGTCACA +
Preference number: 1 (lower is better)
Translates to: HREDGPGALRVAELH*VPPTQGSLPTPTVT
Trigger: TGTGACTGTTGGGGTGGGCAAAGAACCCTGAGTTGGAGGTACTCAGTGAAGTTCAGCGACCCTGAGGGCCCCAGGGCCATCCTCCCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621217.4
3UTR TCA 90 bp GTGGGTTTCACCAAGCCCGAGGTCACTTTGGCCTCTTCTAGAAGCTaGTCGAGGGCATCCAGGTGGTGCAGCGCGCTGTTGCCCAACGCC +
Preference number: 1 (lower is better)
Translates to: VGFTKPEVTLASSRS*SRASRWCSALLPNA
Trigger: GGCGTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGATCAGCTTCTAGAAGAGGCCAAAGTGACCTCGGGCTTGGTGAAACCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CCA 90 bp GGGCCCCTGTTCCACATCAAAGCTACAAGCACTGTTGTCAGGGCATaGAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTG +
Preference number: 1 (lower is better)
Translates to: GPLFHIKATSTVVRA*RVTGPEPSSSQGSL
Trigger: CAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGTGCTTGTAGCTTTGATGTGGAACAGGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CCA 90 bp ACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTaGGGACTTTGCAGTATGCCAGTTCCTTATTCTGGGCCAGGCACC +
Preference number: 1 (lower is better)
Translates to: TPWPFQDDAVHQRQG*GLCSMPVPYSGPGT
Trigger: GGTGCCTGGCCCAGAATAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR TCA 90 bp TGTTCCACATCAAAGCTACAAGCACTGTTGTCAGGGCATGGAGAGTaGCGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCT +
Preference number: 1 (lower is better)
Translates to: CSTSKLQALLSGHGE*RDQSPPRLRAACLA
Trigger: AGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGTGCTTGTAGCTTTGATGTGGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CCA 90 bp GCCCCTTGGGCCGTGCATCTGTCAGGTGTGAGGATGTGGCTCTTGTaGGGAATGACCCATGACAGTCTCTCTTTAGAGACTCCCACCCCC +
Preference number: 1 (lower is better)
Translates to: APWAVHLSGVRMWLL*GMTHDSLSLETPTP
Trigger: GGGGGTGGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR GCA 90 bp AGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATaGTGTCCACCAGAGGCAGGGCTGGGGACTTTGCAGTATGCCAGT +
Preference number: 1 (lower is better)
Translates to: RDKHTTHHSVAIPGR*CPPEAGLGTLQYAS
Trigger: ACTGGCATACTGCAAAGTCCCCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR GCA 90 bp GGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTaGACTATGCCTGAAAGGGGACATGGCAGCACGTGCACTCAGGCT +
Preference number: 1 (lower is better)
Translates to: GEGISVLSTGIGGSD*TMPERGHGSTCTQA
Trigger: AGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
3UTR CCA 90 bp CATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTaGCGGGGGCCAAGCACTGTTGAAGCAATAGGGTCTGGTGACTCA +
Preference number: 1 (lower is better)
Translates to: HVPGSHPAARVAGTS*RGPSTVEAIGSGDS
Trigger: TGAGTCACCAGACCCTATTGCTTCAACAGTGCTTGGCCCCCGCCAGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CCA 90 bp CGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGCTGGATGGGGCTAAATGGAGAGAGT +
Preference number: 1 (lower is better)
Translates to: RSRTFSFSGLASNMT*VMAAGGWMGLNGES
Trigger: ACTCTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR TCA 90 bp AACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTaGGCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGG +
Preference number: 1 (lower is better)
Translates to: NMVCATFLSPEMSDC*ACSPGLRKLPPCLW
Trigger: CCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR TCA 90 bp CAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATGCCTaGAAGGGGACATGGCAGCACGTGCACTCAGGCTGTGGTTGCCTT +
Preference number: 1 (lower is better)
Translates to: QRPIHRNWWVRLHYA*KGTWQHVHSGCGCL
Trigger: AAGGCAACCACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
3UTR GCA 90 bp GGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATaGCTGAAAGGGGACATGGCAGCACGTGCACTCAGGCTGTGGTTG +
Preference number: 1 (lower is better)
Translates to: GSASYPQELVGQTAL*LKGDMAARALRLWL
Trigger: CAACCACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
3UTR CCA 90 bp AGGGCTGCAGCCCCTTGGGCCGTGCATCTGTCAGGTGTGAGGATGTaGCTCTTGTGGGGAATGACCCATGACAGTCTCTCTTTAGAGACT +
Preference number: 1 (lower is better)
Translates to: RAAAPWAVHLSGVRM*LLWGMTHDSLSLET
Trigger: AGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR CCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTaGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTCTGGAGA +
Preference number: 1 (lower is better)
Translates to: HAKQEVVSRMACPHG*RHAFPRKLSTCFWR
Trigger: TCTCCAGAAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CCA 90 bp GGGACGAGGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTaGTGGGTCAGACTGCACTATGCCCTGTCTCTTCAGCATGTGGTA +
Preference number: 1 (lower is better)
Translates to: GTRWWRGDQRPIHRN*WVRLHYALSLQHVV
Trigger: TACCACATGCTGAAGAGACAGGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACCTCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR TCA 90 bp ACACGGAGGACAAACTGTTGGTCGTGTCCAGCTCCGCAAGGTCGATaGGCGTGCCTTGGTTACTGCACTGACTGTTTCCTTCCGAGTCAG +
Preference number: 1 (lower is better)
Translates to: TRRTNCWSCPAPQGR*ACLGYCTDCFLPSQ
Trigger: CTGACTCGGAAGGAAACAGTCAGTGCAGTAACCAAGGCACGCTCATCGACCTTGCGGAGCTGGACACGACCAACAGTTTGTCCTCCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CCA 90 bp CACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCACCTaGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTTT +
Preference number: 1 (lower is better)
Translates to: HLPFPRDVRLLSLFT*APQASPVSMAAGDF
Trigger: AAAATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR GCA 90 bp TTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCCATGTCCTaGCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAG +
Preference number: 1 (lower is better)
Translates to: FLSLVGPVMRPNSMS*QDVHRTQPATARDK
Trigger: CTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CCA 90 bp ATCACCTCCAGACCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTaGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTC +
Preference number: 1 (lower is better)
Translates to: ITSRPNISLTVPLSS*GTVEVSGQHIRTYV
Trigger: GACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTCTGGAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR TCA 90 bp AGTGAAACCTGCTTGCTAAAGACAGCGAGGGGCAGGGAAGGGATATaGCCTCTTCCCATAGTAAGGAATAAGGAAGCCTGGCAAGGGGCA +
Preference number: 1 (lower is better)
Translates to: SETCLLKTARGREGI*PLPIVRNKEAWQGA
Trigger: TGCCCCTTGCCAGGCTTCCTTATTCCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCCCCTCGCTGTCTTTAGCAAGCAGGTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR GCA 90 bp ATCTCACTGAGCAGTCTCACGTTGTTGTTAACTTCCTCTAACGTGTaGAGACGCTTGGTCACCTTCTGGATCCGTGCCTCGTCTTCCTTC +
Preference number: 1 (lower is better)
Translates to: ISLSSLTLLLTSSNV*RRLVTFWIRASSSF
Trigger: GAAGGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGTTAACAACAACGTGAGACTGCTCAGTGAGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CAGGCAGCGGTCCCCGGCCTGGGGCTGAAGAAGTCCAGGTCGGACTGTTCCCTCCGTTGCTTGTGCTGCTaGGCCCCAGGGTGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: QAAVPGLGLKKSRSDCSLRCLCC*APGWPR
Trigger: CCGAGGCCACCCTGGGGCCCAGCAGCACAAGCAACG...GAGGGAACAGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGACCGCTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCGCCCTAGCCCCGCCTTaGCTGAGGAGGGGTCAGGTG +
Preference number: 2 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVALAPP*LRRGQV
Trigger: CACCTGACCCCTCCTCAGGCAAGGCGGGGCTAGGGC...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621217.4
3UTR-3UTR CCA 90 bp CTGAGGGCTGGAGCAGAGGAGCATCGGAGGCGCCACAGGCAGCGGTCCCCGGCCCGGAGGACAAACTGTTaGTCGTGTCCAGCTCCGCAA +
Preference number: 2 (lower is better)
Translates to: LRAGAEEHRRRHRQRSPARRTNC*SCPAPQ
Trigger: TTGCGGAGCTGGACACGACCAACAGTTTGTCCTCCG...GGCCGGGGACCGCTGCCTGTGGCGCCTCCGATGCTCCTCTGCTCCAGCCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGCAGGGGCACGTGGATGCTaGCCAGGGAGAGCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: VGGGSMELQQGCSPLGRAGARGC*PGRAQA
Trigger: GGCCTGAGCTCTCCCTGGCCAGCATCCACGTGCCCC...TGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GCGGTCCCCGGCCTGGGGCTGAAGAAGTCCAGGTCGGACTGTTCCCTCTGGAGCGGGTGGAGTAGGTGCTaGGGCCAACACGGAGGACAA +
Preference number: 2 (lower is better)
Translates to: AVPGLGLKKSRSDCSLWSGWSRC*GQHGGQ
Trigger: TTGTCCTCCGTGTTGGCCCCAGCACCTACTCCACCC...GCTCCAGAGGGAACAGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp GCGGTCCCCGGCCTGGGGCTGAAGAAGTCCAGGTCGGACTGTTCCCTCTGGAGCGACCCAACATCTCGCTaGCAGTGCCCCTCAGTAGCT +
Preference number: 2 (lower is better)
Translates to: AVPGLGLKKSRSDCSLWSDPTSR*QCPSVA
Trigger: AGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTC...GCTCCAGAGGGAACAGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp CAGGCAGCGGTCCCCGGCCTGGGGCTGAAGAAGTCCAGGTCGGACTGTTCCCTCAGTGACATCAATGGGTaGAGGCGCCGGGAGAAGCTG +
Preference number: 2 (lower is better)
Translates to: QAAVPGLGLKKSRSDCSLSDING*RRREKL
Trigger: CAGCTTCTCCCGGCGCCTTCACCCATTGATGTCACT...GAGGGAACAGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGACCGCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621217.4
3UTR-3UTR TCA 90 bp GGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGTCCCCGGCCTGGGGCTaGAGAAGTCCAGGTCGGACT +
Preference number: 2 (lower is better)
Translates to: GMAAGAGWRGKHGIATGLSPAWG*RSPGRT
Trigger: AGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGA...CAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCCACCTACGCCAAGCCTaGGGGTCCATGTTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVHLRQA*GSMFPG
Trigger: TCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTG...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTTGGGGGCAGGAACACTaGCTGGGACCACAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: LVGGGSMELQQGCSPLGRWGQEH*LGPQEL
Trigger: CAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCCCCCA...ACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: ESDGTRALLVSGQPAWLQASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...TTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAATCCACAGGAGGGAACTaGTCCACCTCGCCCACCTCT +
Preference number: 2 (lower is better)
Translates to: ESDGTRALLVSGQPAWLQSTGGN*STSPTS
Trigger: AGAGGTGGGCGAGGTGGACCAGTTCCCTCCTGTGGA...TTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp AGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGGGCTGCCCTGGGACTaGAAACTCAGTGGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: SWLAGEAWNCNRAAAPWAGLPWD*KLSGWK
Trigger: CTTCCAGCCACTGAGTTTCCAGTCCCAGGGCAGCCC...GGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CAA 90 bp CTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTaGGGCCGTGCATCTGTCAGGTGTGAGGATGTGGCTCTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: LVGGGSMELQQGCSP*GRASVRCEDVALVG
Trigger: CCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp TTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTGGGGATGGCAGCAGGAGCCACATGCCATCTGGTaGGAGGAGAGGGAGGCCAAA +
Preference number: 2 (lower is better)
Translates to: LFWARHLPGPPPWGWQQEPHAIW*EEREAK
Trigger: TTTGGCCTCCCTCTCCTCTCACCAGATGGCATGTGG...CTCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTGCCATTCCAGGACGATaGTGTCCACCAGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAAIPGR*CPPEAG
Trigger: CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGC...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp CTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTTCAGGGCAGCCTGCCTaGCTTCAAGGTGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: LVGGGSMELQQGCSPLGRSGQPA*LQGGDH
Trigger: GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGA...ACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp TGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGTCAGGGCAGCCTGCCTaGCTTCAAGGTGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: WLAGEAWNCNRAAAPWAVSGQPA*LQGGDH
Trigger: GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGA...CACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp AGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGACAGCAGTGGTGGCTGGGACAAGCTaGCGGGGGCCAAGCACTGTT +
Preference number: 2 (lower is better)
Translates to: RKQTPTPSLGVHVPGTAVVAGTS*RGPSTV
Trigger: AACAGTGCTTGGCCCCCGCCAGCTTGTCCCAGCCAC...CACTGCTGTCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTATCCAGCAGCTAGAGTaGCTGGGACAAGCTGGCGGG +
Preference number: 2 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAIQQLE*LGQAGG
Trigger: CCCGCCAGCTTGTCCCAGCCACTCTAGCTGCTGGAT...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp TGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGTCGGACGGCGATCTGTaGCCCTTCCAGCTCCTTGTT +
Preference number: 2 (lower is better)
Translates to: WLAGEAWNCNRAAAPWAVSDGDL*PFQLLV
Trigger: AACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGA...CACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CCA 90 bp CACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGCCACCTCCCTGGGGATaGCAGCAGGAGGCCAAGCCT +
Preference number: 2 (lower is better)
Translates to: HNSSLRGHSRTMLSTRGRPPPWG*QQEAKP
Trigger: AGGCTTGGCCTCCTGCTGCCATCCCCAGGGAGGTGG...CCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580646.5
3UTR-3UTR CCA 90 bp CCCTTGGGCCGTGCATCTGTCAGGTGTGAGGATGTGGCTCTTGTGGGGAATGACGGCGGCAGTGGAGCTTaGGAGCTGCTTGAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: PLGRASVRCEDVALVGNDGGSGA*ELLEEG
Trigger: CCCCTCCTCAAGCAGCTCCCAAGCTCCACTGCCGCC...GTCATTCCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CAA 90 bp TGTTCCCTCTGGAGCAGGTGCCACTGGCTGTTCCCAGCTGACTCTTaGGGAGGAACATTAGGGGCTGGGTCGGCGAGGCCCAAGCAGAGT +
Preference number: 2 (lower is better)
Translates to: CSLWSRCHWLFPADS*GGTLGAGSARPKQS
Trigger: ACTCTGCTTGGGCCTCGCCGACCCAGCCCCTAATGTTCCTCCCAAAGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCAGAGGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR TCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCCACTCCGCACCCCTaGCAGCATATGGCCACTTCA +
Preference number: 2 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHATPHP*QHMATS
Trigger: TGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGC...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp GACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATACCTCTGTGCTCAGCTaGTCCCCCAGGGCGAAGGTC +
Preference number: 2 (lower is better)
Translates to: DTACHCQGQAHNSSLRGHTSVLS*SPRAKV
Trigger: GACCTTCGCCCTGGGGGAGCAGCTGAGCACAGAGGT...ATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp GATGACCCGGGAGAGGTTGTCACTGGCTTGCAGGATGTCCCCCAAACTGTTATCGGGCGTTGCTTGTGCTaGTGGGCCCCAGGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: DDPGEVVTGLQDVPQTVIGRCLC*WAPGWP
Trigger: AGGCCACCCTGGGGCCCAGCAGCACAAGCAACGCCC...GATAACAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGGGTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGCTGGAAGAGCGGGCTaGCGGGCCCCGTGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELAGRAG*RAPWRR
Trigger: CCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGC...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGGCAGCAGGAGCTGGTTaGCGGGGGAAGCATGGAATT +
Preference number: 2 (lower is better)
Translates to: GMAAGAGWRGKHGIATGLAAGAG*RGKHGI
Trigger: AATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGC...CAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp ACCAGGGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGGGTGGCCTCGGCCTaGCTAGAGGAGCGGCTCCGT +
Preference number: 2 (lower is better)
Translates to: TREHGLCHLPFPRDVRLLRVASA*LEERLR
Trigger: ACGGAGCCGCTCCTCTAGCCAGGCCGAGGCCACCCT...CAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTCACGTCAGGTCGTCCTaGGGGACACTCCTTGGCAAA +
Preference number: 2 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAHVRSS*GTLLGK
Trigger: TTTGCCAAGGAGTGTCCCCCAGGACGACCTGACGTG...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CAA 90 bp GAGGAGGGTGGAGTAGGTGCTGGGGCCAACACGGAGGACAAACTGTaGGTCGTGTCCAGCTCCGCAAGGTCGATGAGCGTGCCTTGGTTA +
Preference number: 2 (lower is better)
Translates to: EEGGVGAGANTEDKL*VVSSSARSMSVPWL
Trigger: TAACCAAGGCACGCTCATCGACCTTGCGGAGCTGGACACGACCAACAGTTTGTCCTCCGTGTTGGCCCCAGCACCTACTCCACCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCGACCCAACATCTCGCTaGCAGTGCCCCTCAGTAGCT +
Preference number: 2 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCDPTSR*QCPSVA
Trigger: AGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTC...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp GATGAGAGGGGAGGTAGTGGGTTTCACCAAGCCCGAGGTCACTTTGGCCTCTTCAACGCCAAGCCATGGTaGCCAGGGACTGCGGGCTCA +
Preference number: 2 (lower is better)
Translates to: DERGGSGFHQARGHFGLFNAKPW*PGTAGS
Trigger: TGAGCCCGCAGTCCCTGGGCACCATGGCTTGGCGTT...GAAGAGGCCAAAGTGACCTCGGGCTTGGTGAAACCCACTACCTCCCCTCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CTTCTAGAAGCTGATCGAGGGCATCCAGGTGGTGCAGCGCGCTGTTGCCCAACGGCAGCAGGAGCTGGTTaGCGGGGGAAGCATGGAATT +
Preference number: 2 (lower is better)
Translates to: LLEADRGHPGGAARCCPTAAGAG*RGKHGI
Trigger: AATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGC...CGTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGATCAGCTTCTAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCAGCAGGAGCTGGTTaGCGGGGGAAGCATGGAATT +
Preference number: 2 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHAAGAG*RGKHGI
Trigger: AATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGC...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: QLITPWPFQDDAVHQRQGASSLF*ARHLPG
Trigger: CCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGC...GCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp AGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGACAGCAGTGCACCAGAGGCAGGGCTaGGGACTTTGCAGTATGCCA +
Preference number: 2 (lower is better)
Translates to: RKQTPTPSLGVHVPGTAVHQRQG*GLCSMP
Trigger: TGGCATACTGCAAAGTCCCCAGCCCTGCCTCTGGTG...CACTGCTGTCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp AGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCCAACTCATCACTCCGTaGCCATTCCAGGACGATGCT +
Preference number: 2 (lower is better)
Translates to: SWLAGEAWNCNRAAAPWAQLITP*PFQDDA
Trigger: AGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG...GGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp TGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGGTGCCCCTCAGTAGCTaGGGAACAGTTGAGGTTTCT +
Preference number: 2 (lower is better)
Translates to: WLAGEAWNCNRAAAPWAVVPLSS*GTVEVS
Trigger: AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCAC...CACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: DVRLLSLFTWAPQASPVSASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...AGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp AGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: SQGPLRTPDSIWPLQVTQASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCCGCTTGGTCACCTTCTaGATCCGTGCCTCGTCTTCC +
Preference number: 2 (lower is better)
Translates to: QEVVSRMACPHGWRHAFPRLVTF*IRASSS
Trigger: GGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCG...GGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CAA 90 bp GGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTaGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCT +
Preference number: 2 (lower is better)
Translates to: GLCHLPFPRDVRLLS*FTWAPQASPVSMAA
Trigger: AGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CAA 90 bp TGTTCCCTCTGGAGCAGGTGCCACTGGCTGTTCCCAGCTGACTCTTaGGGAGGAACATTAGGGGCTGGGTCGGCGAGGCCTGACAATAGA +
Preference number: 2 (lower is better)
Translates to: CSLWSRCHWLFPADS*GGTLGAGSARPDNR
Trigger: TCTATTGTCAGGCCTCGCCGACCCAGCCCCTAATGTTCCTCCCAAAGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCAGAGGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621217.4
3UTR-3UTR TCA 90 bp GGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCATCAGGGCATGGAGAGTaGCGGGACCAGAGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: GQIPCPAKMSIGHSLPLPSGHGE*RDQSPP
Trigger: AGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGA...TGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR TCA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTTTCCCGGGACAGCAGTaGAGTCAGGGGCCACTCCGC +
Preference number: 2 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQAFPGQQ*SQGPLR
Trigger: GCGGAGTGGCCCCTGACTTCACTGCTGTCCCGGGAA...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR TCA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCGTGGGGAATGACCCATaGCAGTCTCTCTTTAGAGAC +
Preference number: 2 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVVGNDP*QSLFRD
Trigger: GTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCAC...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp CCACCTCCCTGGGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGGTGGGGAATGACCCATaGCAGTCTCTCTTTAGAGAC +
Preference number: 2 (lower is better)
Translates to: PPPWGWQQELVGGGSMELVGNDP*QSLFRD
Trigger: GTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCAC...CAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCCCAGGGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGTGCATCTGTCAGGTGTaGGGATGTGGCTCTTGTGGG +
Preference number: 2 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLCICQV*GCGSCG
Trigger: CCCACAAGAGCCACATCCTCACACCTGACAGATGCA...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp GCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTCCACATGCCATCTGGTaGGAGGAGAGGGAGGCCAAA +
Preference number: 2 (lower is better)
Translates to: ACSPGLRKLPPCLWQLVIPHAIW*EEREAK
Trigger: TTTGGCCTCCCTCTCCTCTCACCAGATGGCATGTGG...AATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp ACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGAATTGCAACAGGGCTaGAGCCCCTTGGGCCGTGCA +
Preference number: 2 (lower is better)
Translates to: TQLITPWPFQDDAVHQRQELQQG*SPLGRA
Trigger: TGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTC...CTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCAGACATTCCCAGGGCTaGAGCAGCCAGTCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCRHSQG*SSQSLE
Trigger: TTCCAGAGACTGGCTGCTGCAGCCCTGGGAATGTCT...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp AGCTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCTGCCTGGCTTCAAGGTaGAGATCACAGCGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: SCSPRAKVSLYRSRTFSFCLASR*RSQRPL
Trigger: CAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCA...GAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCTCAGGGCAGCCTGCCTaGCTTCAAGGTGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: HSLPLPGTSTQLITPWPFSGQPA*LQGGDH
Trigger: GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGA...GAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp CAAGGGCAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACGATGGCAGCAGGAGCTaGTTGGCGGGGGAAGCATGG +
Preference number: 2 (lower is better)
Translates to: QGQQSWDIQYSHLPRSTDDGSRS*LAGEAW
Trigger: CCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATC...GTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAA +
Preference number: 2 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVLPIPS*ACHEAK
Trigger: TTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAG...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp GATGAGAGGGGAGGTAGTGGGTTTCACCAAGCCCGAGGTCACTTTGGCCTCTTCATCCAGCAGCTAGAGTaGCTGGGACAAGCTGGCGGG +
Preference number: 2 (lower is better)
Translates to: DERGGSGFHQARGHFGLFIQQLE*LGQAGG
Trigger: CCCGCCAGCTTGTCCCAGCCACTCTAGCTGCTGGAT...GAAGAGGCCAAAGTGACCTCGGGCTTGGTGAAACCCACTACCTCCCCTCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATGCAGGAGGCCAAGCCTaGGGGTCCATGTTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: QDVHRTQPATARDKHTTHAGGQA*GSMFPG
Trigger: TCCCGGGAACATGGACCCCCAGGCTTGGCCTCCTGC...ATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580646.5
3UTR CAA 90 bp AGGGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATaGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCT +
Preference number: 2 (lower is better)
Translates to: REHGLCHLPFPRDVR*LSLFTWAPQASPVS
Trigger: AGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CAA 90 bp TGGGACGAGGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATaGGTGGGTCAGACTGCACTATGCCTGAAAGGGGACATGGCAGCA +
Preference number: 2 (lower is better)
Translates to: WDEVVERGSASYPQE*VGQTALCLKGDMAA
Trigger: TGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACCTCGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
3UTR-3UTR TCA 90 bp GCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTCCCCAGTGGCTTCAGTaGATGCCAGTAGAAGGAAGC +
Preference number: 2 (lower is better)
Translates to: ACSPGLRKLPPCLWQLVIPQWLQ*MPVEGS
Trigger: GCTTCCTTCTACTGGCATTCACTGAAGCCACTGGGG...AATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp GACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCAGAAGCAGCATCTCACTaGGCAGTCTCACGTTGTTGT +
Preference number: 2 (lower is better)
Translates to: DQSPPRLRAACLASRWRSEAASH*AVSRCC
Trigger: ACAACAACGTGAGACTGCTCAGTGAGATGCTGCTTC...TGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp TGTCACAGGAAGGGCACTGCTAGGCTTGATCGATTCCAGGGGCACGTGGATGCTGCCTCTTCTAGAAGCTaGTCGAGGGCATCCAGGTGG +
Preference number: 2 (lower is better)
Translates to: CHRKGTARLDRFQGHVDAASSRS*SRASRW
Trigger: CCACCTGGATGCCCTCGATCAGCTTCTAGAAGAGGC...AGCATCCACGTGCCCCTGGAATCGATCAAGCCTAGCAGTGCCCTTCCTGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTCCAGTACAGCCATTTaGCACGAAGCACTGACCTCA +
Preference number: 2 (lower is better)
Translates to: AKQEVVSRMACPHGWRHASSTAI*HEALTS
Trigger: TGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGA...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp GGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGACTTCCTCTAACGTGTaGAGACGCTTGGTCACCTTC +
Preference number: 2 (lower is better)
Translates to: GMAAGAGWRGKHGIATGLTSSNV*RRLVTF
Trigger: GAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGT...CAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp CCAAGCACTGTTGAAGCAATAGGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATGGAGGGTGGAGTAGGTaGTGGGGCCAACACGGAGGA +
Preference number: 2 (lower is better)
Translates to: PSTVEAIGSGDSAQVWPDGGWSR*WGQHGG
Trigger: TCCTCCGTGTTGGCCCCAGCACCTACTCCACCCTCC...ATCGGGCCACACTTGAGCTGAGTCACCAGACCCTATTGCTTCAACAGTGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGTCAGGGCAGCCTGCCTaGCTTCAAGGTGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: HRTQPATARDKHTTHHSVSGQPA*LQGGDH
Trigger: GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGA...CACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp CCCTTGGGCCGTGCATCTGTCAGGTGTGAGGATGTGGCTCTTGTGGGGAATGACACTGTTGTCAGGGCATaGAGAGTGACGGGACCAGAG +
Preference number: 2 (lower is better)
Translates to: PLGRASVRCEDVALVGNDTVVRA*RVTGPE
Trigger: CTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGT...GTCATTCCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTACTGTTGTCAGGGCATaGAGAGTGACGGGACCAGAG +
Preference number: 2 (lower is better)
Translates to: ACSPGLRKLPPCLWQLVITVVRA*RVTGPE
Trigger: CTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGT...AATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCGTGCCCCTCAGTAGCTaGGGAACAGTTGAGGTTTCT +
Preference number: 2 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCVPLSS*GTVEVS
Trigger: AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCAC...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp GGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGTTTGTGACGGAGGCTTaGAGTACATGTCCCAGGATC +
Preference number: 2 (lower is better)
Translates to: GMAAGAGWRGKHGIATGLFVTEA*STCPRI
Trigger: GATCCTGGGACATGTACTCCAAGCCTCCGTCACAAA...CAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp ATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAACATGACCTGGGTGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: IPKPHLLLQWIGQQHDLGASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...ACCCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GAGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTCCCAACGCCAAGCCATaGTGCCCAGGGACTGCGGGC +
Preference number: 2 (lower is better)
Translates to: ESSVPEGGCNFTFIDLGTPNAKP*CPGTAG
Trigger: GCCCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGG...AGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CAA 90 bp TGGGACGAGGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATaGGTGGGTCAGACTGCACTATGCCCTGTCTCTTCAGCATGTGGT +
Preference number: 2 (lower is better)
Translates to: WDEVVERGSASYPQE*VGQTALCPVSSACG
Trigger: ACCACATGCTGAAGAGACAGGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACCTCGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR TCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGCTCCGCAAGGTCGATaGGCGTGCCTTGGTTACTGC +
Preference number: 2 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELAPQGR*ACLGYC
Trigger: GCAGTAACCAAGGCACGCTCATCGACCTTGCGGAGC...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp CAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACCTCAACGCTCCGCAAGGTCGATaGGCGTGCCTTGGTTACTGC +
Preference number: 2 (lower is better)
Translates to: QQSWDIQYSHLPRSTDLNAPQGR*ACLGYC
Trigger: GCAGTAACCAAGGCACGCTCATCGACCTTGCGGAGC...GTTGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp CAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCGGGGACTTTGCAGTATaGCAGTTCCTTATTCTGGGC +
Preference number: 2 (lower is better)
Translates to: QLITPWPFQDDAVHQRQGGDFAV*QFLILG
Trigger: GCCCAGAATAAGGAACTGGCATACTGCAAAGTCCCC...GCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp GGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGACACAGCCTGCCACTaGCAGGGACAAGCACACAAC +
Preference number: 2 (lower is better)
Translates to: GLEYMSQDHIQQLEWLGQDTACH*QGQAHN
Trigger: GTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC...TTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp CCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCTTGGGCACTGCAGCCTaGAGCACGATGCTCTTGACA +
Preference number: 2 (lower is better)
Translates to: PGTSTQLITPWPFQDDAVLGTAA*STMLLT
Trigger: TGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAA...GACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp AGGATGTGGCTCTTGTGGGGAATGACCCATGACAGTCTCTCTTTAGAGACTCCCGACCTGGGTGATGGCTaGAGGTGGCTGGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: RMWLLWGMTHDSLSLETPDLGDG*RWLDGA
Trigger: AGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTC...GGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp GAGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTGCCAGGAGAGGGCGTTaGTTGTGCTGCTGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: ESSVPEGGCNFTFIDLGTARRGR*LCCWAP
Trigger: TGGGGCCCAGCAGCACAAGCAACGCCCTCTCCTGGC...AGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp ACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGACAGTTCTTCATGCATaGCTCCAGCACCGTCAGGGC +
Preference number: 2 (lower is better)
Translates to: TQLITPWPFQDDAVHQRQTVLHA*LQHRQG
Trigger: GCCCTGACGGTGCTGGAGGCATGCATGAAGAACTGT...CTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CCA 90 bp TGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTGCCTGGCTTCAAGGTaGAGATCACAGCGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: CQGQAHNSSLRGHSRTMLCLASR*RSQRPL
Trigger: CAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCA...CAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp GGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGATCACAGCAGCAGTTTaGTTCTCAGCAGAAATGCCC +
Preference number: 2 (lower is better)
Translates to: GMAAGAGWRGKHGIATGLITAAV*FSAEMP
Trigger: GGGCATTTCTGCTGAGAACCAAACTGCTGCTGTGAT...CAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTATCACAGCAGCAGTTTaGTTCTCAGCAGAAATGCCC +
Preference number: 2 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAITAAV*FSAEMP
Trigger: GGGCATTTCTGCTGAGAACCAAACTGCTGCTGTGAT...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACACCCCTGACAGCATATaGCCACTTCAAGTCACACAG +
Preference number: 2 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHTPDSI*PLQVTQ
Trigger: CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACAGGATGTGGCTCTTGTaGGGAATGACCCATGACAGT +
Preference number: 2 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHRMWLL*GMTHDS
Trigger: ACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CCCTTGGGCCGTGCATCTGTCAGGTGTGAGGATGTGGCTCTTGTGGGGAATGACTCAGGTGTGAGGATGTaGCTCTTGTGGGGAATGACC +
Preference number: 2 (lower is better)
Translates to: PLGRASVRCEDVALVGNDSGVRM*LLWGMT
Trigger: GGTCATTCCCCACAAGAGCCACATCCTCACACCTGA...GTCATTCCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp AGGATGTGGCTCTTGTGGGGAATGACCCATGACAGTCTCTCTTTAGAGACTCCCAGGGCTGCAGCCCCTTaGGCCGTGCATCTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: RMWLLWGMTHDSLSLETPRAAAP*AVHLSG
Trigger: ACCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCT...GGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAACACCAGAGGCAGGGCTaGGGACTTTGCAGTATGCCA +
Preference number: 2 (lower is better)
Translates to: GLEYMSQDHIQQLEWLGQHQRQG*GLCSMP
Trigger: TGGCATACTGCAAAGTCCCCAGCCCTGCCTCTGGTG...TTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp CTTCTAGAAGCTGATCGAGGGCATCCAGGTGGTGCAGCGCGCTGTTGCCCAACGCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAA +
Preference number: 2 (lower is better)
Translates to: LLEADRGHPGGAARCCPTLPIPS*ACHEAK
Trigger: TTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAG...CGTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGATCAGCTTCTAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCCACCTTCTCCTTCAGTaGATTGGCCAGCAACATGAC +
Preference number: 2 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCHLLLQ*IGQQHD
Trigger: GTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTG...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CTATCCACAGGAATTGGTGGGTCAGACTGCACTATGCCTGAAAGGGGACATGGCCGTGCACTCAGGCTGTaGTTGCCTTGTCACCCCTCC +
Preference number: 2 (lower is better)
Translates to: LSTGIGGSDCTMPERGHGRALRL*LPCHPS
Trigger: GGAGGGGTGACAAGGCAACCACAGCCTGAGTGCACG...GCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
3UTR-3UTR CCA 90 bp TGTCACAGGAAGGGCACTGCTAGGCTTGATCGATTCCAGGGGCACGTGGATGCTATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: CHRKGTARLDRFQGHVDAMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...AGCATCCACGTGCCCCTGGAATCGATCAAGCCTAGCAGTGCCCTTCCTGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp TTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTTTTGCATCTGTCAGGTGTaGGGATGTGGCTCTTGTGGG +
Preference number: 2 (lower is better)
Translates to: LFTWAPQASPVSMAAGDFCICQV*GCGSCG
Trigger: CCCACAAGAGCCACATCCTCACACCTGACAGATGCA...AAAATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp GAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAAGCTCCTTGTTGATCTaGTCACAGAAGCCAATTATG +
Preference number: 2 (lower is better)
Translates to: ESDGTRALLVSGQPAWLQSSLLI*SQKPIM
Trigger: CATAATTGGCTTCTGTGATCAGATCAACAAGGAGCT...TTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR TCA 90 bp CAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCTTCCCCACTTCGTTATaGAATCTCCTCCCACAGTTC +
Preference number: 2 (lower is better)
Translates to: QEVVSRMACPHGWRHAFPFPTSL*NLLPQF
Trigger: GAACTGTGGGAGGAGATTTCATAACGAAGTGGGGAA...GGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR GCA 90 bp GGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACCAGGGCTGGGGACTTTaGAGTATGCCAGTTCCTTAT +
Preference number: 2 (lower is better)
Translates to: GSGDSAQVWPDLITSRPNQGWGL*SMPVPY
Trigger: ATAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTG...GTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTGACACAGCCTGCCACTaGCAGGGACAAGCACACAAC +
Preference number: 2 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQADTACH*QGQAHN
Trigger: GTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp CAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGTGCCTGGCTTCAAGGTaGAGATCACAGCGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: QIPCPAKMSIGHSLPLPGCLASR*RSQRPL
Trigger: CAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCA...CCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp GGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAACTGTTGTCAGGGCATaGAGAGTGACGGGACCAGAG +
Preference number: 2 (lower is better)
Translates to: GLEYMSQDHIQQLEWLGQTVVRA*RVTGPE
Trigger: CTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGT...TTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp AGACCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTTGGCGGGGGAAGCATaGAATTGCAACAGGGCTGCA +
Preference number: 2 (lower is better)
Translates to: RPNISLTVPLSSWGTVEVLAGEA*NCNRAA
Trigger: TGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAA...AACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACCTCAACGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: QQSWDIQYSHLPRSTDLNASSLF*ARHLPG
Trigger: CCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGC...GTTGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp CCGGGAGAGGTTGTCACTGGCTTGCAGGATGTCCCCCAAACTGTTATCATTGTCGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: PGEVVTGLQDVPQTVIIVASSLF*ARHLPG
Trigger: CCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGC...GACAATGATAACAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp AGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGTCACTTTCATTGACTTaGGCACTGCAGCCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: SQGPLRTPDSIWPLQVTQSLSLT*ALQPAA
Trigger: TGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGA...CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGTGGGACCACAGGAGCTaGGAAGGGAGGCGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQEWDHRS*EGRRQW
Trigger: CCACTGCCGCCTCCCTTCCCAGCTCCTGTGGTCCCA...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CTTCTAGAAGCTGATCGAGGGCATCCAGGTGGTGCAGCGCGCTGTTGCCCAACGCTCCTGCAGGTCATCTaGGTTTTTGCTTTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: LLEADRGHPGGAARCCPTLLQVI*VFAFQQ
Trigger: CTGCTGAAAAGCAAAAACCCAGATGACCTGCAGGAG...CGTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGATCAGCTTCTAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR TCA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGCCCCAGTGGCTTCAGTaGATGCCAGTAGAAGGAAGC +
Preference number: 2 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLPQWLQ*MPVEGS
Trigger: GCTTCCTTCTACTGGCATTCACTGAAGCCACTGGGG...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp AGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGCTTCCAGCTCCTTGTTaGTCTGATCACAGAAGCCAA +
Preference number: 2 (lower is better)
Translates to: SQGPLRTPDSIWPLQVTQLPAPC*SDHRSQ
Trigger: TTGGCTTCTGTGATCAGATCAACAAGGAGCTGGAAG...CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR GCA 90 bp CCATTTCCACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTCGACACAGCCTGCCACTaGCAGGGACAAGCACACAAC +
Preference number: 2 (lower is better)
Translates to: PFPHSNSTDIPRAAAASLDTACH*QGQAHN
Trigger: GTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC...GAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTGGAAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp GGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAAGGTTGTCACTGGCTTaGAGGATGTCCCCCAAACTG +
Preference number: 2 (lower is better)
Translates to: GLEYMSQDHIQQLEWLGQRLSLA*RMSPKL
Trigger: CAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCT...TTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp CCCTTGGGCCGTGCATCTGTCAGGTGTGAGGATGTGGCTCTTGTGGGGAATGACATCACAGCAGCAGTTTaGTTCTCAGCAGAAATGCCC +
Preference number: 2 (lower is better)
Translates to: PLGRASVRCEDVALVGNDITAAV*FSAEMP
Trigger: GGGCATTTCTGCTGAGAACCAAACTGCTGCTGTGAT...GTCATTCCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGCACCTACGCCAAGCCTaGGGGTCCATGTTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQEHLRQA*GSMFPG
Trigger: TCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTG...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GCTAAAGACAGCGAGGGGCAGGGAAGGGATATGACCTCTTCCCATAGTAAGGAAGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: AKDSEGQGRDMTSSHSKEASSLF*ARHLPG
Trigger: CCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGC...TTCCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCCCCTCGCTGTCTTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTGAGAAGGGGAAATACTaGCTCTCTTCATTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAEKGKY*LSSFSF
Trigger: GAAGGAAAATGAAGAGAGCCAGTATTTCCCCTTCTC...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp CAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACCTCAACGACTCAGCTCAAGTGTaGCCCGATCTCATCACCTCC +
Preference number: 2 (lower is better)
Translates to: QQSWDIQYSHLPRSTDLNDSAQV*PDLITS
Trigger: GGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTC...GTTGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp AGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGACAGCAGTGGCAGCAGCCAGTCTCTaGAAAGCTCTTGGATTTATT +
Preference number: 2 (lower is better)
Translates to: RKQTPTPSLGVHVPGTAVAAASL*KALGFI
Trigger: AATAAATCCAAGAGCTTTCCAGAGACTGGCTGCTGC...CACTGCTGTCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATGCTATTCCCAGTCCTCCTaGCGGTTGGAAGGATTGGTG +
Preference number: 2 (lower is better)
Translates to: ERGSASYPQELVGQTALCYSQSS*RLEGLV
Trigger: CACCAATCCTTCCAACCGCCAGGAGGACTGGGAATA...GCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CCA 90 bp CAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTATCGGACGGCGATCTGTaGCCCTTCCAGCTCCTTGTT +
Preference number: 2 (lower is better)
Translates to: QQLNNLGLHFLRHPVPQVSDGDL*PFQLLV
Trigger: AACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGA...TACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577435.5
ENST00000621870.4
3UTR-3UTR CCA 90 bp CCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTTTGGGACGAGGTGGTaGAGAGGGGATCAGCGTCCT +
Preference number: 2 (lower is better)
Translates to: PSVAGEQLRFLGSTLGHMFGTRW*RGDQRP
Trigger: AGGACGCTGATCCCCTCTCCACCACCTCGTCCCAAA...CATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CCA 90 bp GGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATCGAGGGCATCCAGGTaGTGCAGCGCGCTGTTGCCC +
Preference number: 2 (lower is better)
Translates to: GEQLRFLGSTLGHMSSVTSRASR*CSALLP
Trigger: GGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGA...TGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTCAGGGCATGGAGAGTaGCGGGACCAGAGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYSGHGE*RDQSPP
Trigger: AGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR TCA 90 bp GAGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTGCAGCACGATGCTCTTaGCAGGTAAGGGAGCCGTGT +
Preference number: 2 (lower is better)
Translates to: ESSVPEGGCNFTFIDLGTAARCS*QVREPC
Trigger: ACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGC...AGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATACCTCTGTGCTCAGCTaGTCCCCCAGGGCGAAGGTC +
Preference number: 2 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYTSVLS*SPRAKV
Trigger: GACCTTCGCCCTGGGGGAGCAGCTGAGCACAGAGGT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGTGCCTGGCTTCAAGGTaGAGATCACAGCGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: VQQLNNLGLHFLRHPVPQCLASR*RSQRPL
Trigger: CAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCA...CTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CCA 90 bp TCCGCCTCTTGTTCTCACACTGATCAAACAGCTCCTTCATCAGCTCTCTGTCCCACTGTTGTCAGGGCATaGAGAGTGACGGGACCAGAG +
Preference number: 2 (lower is better)
Translates to: SASCSHTDQTAPSSALCPTVVRA*RVTGPE
Trigger: CTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGT...GGGACAGAGAGCTGATGAAGGAGCTGTTTGATCAGTGTGAGAACAAGAGGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp TTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCACCCCTGACAGCATATaGCCACTTCAAGTCACACAG +
Preference number: 2 (lower is better)
Translates to: FPQRCPIAELVHLGSASFTPDSI*PLQVTQ
Trigger: CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT...GAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp CCGGGAGAGGTTGTCACTGGCTTGCAGGATGTCCCCCAAACTGTTATCATTGTCTCAGGTGTGAGGATGTaGCTCTTGTGGGGAATGACC +
Preference number: 2 (lower is better)
Translates to: PGEVVTGLQDVPQTVIIVSGVRM*LLWGMT
Trigger: GGTCATTCCCCACAAGAGCCACATCCTCACACCTGA...GACAATGATAACAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTCAACTCATCACTCCGTaGCCATTCCAGGACGATGCT +
Preference number: 2 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQAQLITP*PFQDDA
Trigger: AGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp ACCAGGGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGCTGAGTACCTGCTTCTaGAGAAGGGGAAATACTGGC +
Preference number: 2 (lower is better)
Translates to: TREHGLCHLPFPRDVRLLLSTCF*RRGNTG
Trigger: GCCAGTATTTCCCCTTCTCCAGAAGCAGGTACTCAG...CAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp TGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCCTGAGCTTGTTCACCTaGGCTCCGCAAGCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: CRVAVDSKGRIAVYFMPSLSLFT*APQASP
Trigger: GGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAG...GCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CAA 90 bp AGCAGTCTCACGTTGTTGTTAACTTCCTCTAACGTGTGCAGACGCTaGGTCACCTTCTGGATCCGTGCCTCGTCTTCCTTCACCATGGAC +
Preference number: 2 (lower is better)
Translates to: SSLTLLLTSSNVCRR*VTFWIRASSSFTMD
Trigger: GTCCATGGTGAAGGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGTTAACAACAACGTGAGACTGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp AGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTTCAGGGCATGGAGAGTaGCGGGACCAGAGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: RFQGEDSSLFHAKQEVVSSGHGE*RDQSPP
Trigger: AGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGA...ACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR TCA 90 bp GTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGCTGTCAGATTTGGGCTaGGGGCGCTTCAGAAAAAGC +
Preference number: 2 (lower is better)
Translates to: VQQLNNLGLHFLRHPVPQLSDLG*GRFRKS
Trigger: GCTTTTTCTGAAGCGCCCTCAGCCCAAATCTGACAG...CTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582376.1
3UTR-3UTR GCA 90 bp TGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCGGGGAAGCATGGAATTaGAACAGGGCTGCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: CRVAVDSKGRIAVYFMPSGEAWN*NRAAAP
Trigger: AGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCC...GCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATGCCATTCCAGGACGATaGTGTCCACCAGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYAIPGR*CPPEAG
Trigger: CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGC...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp TGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCGACACAGCCTGCCACTaGCAGGGACAAGCACACAAC +
Preference number: 2 (lower is better)
Translates to: CRVAVDSKGRIAVYFMPSDTACH*QGQAHN
Trigger: GTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC...GCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp ATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAACATGACCTGGGTGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAC +
Preference number: 2 (lower is better)
Translates to: IPKPHLLLQWIGQQHDLGVPEGG*NFTFID
Trigger: GTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...ACCCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp AGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTCACCTACGCCAAGCCTaGGGGTCCATGTTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: RFQGEDSSLFHAKQEVVSHLRQA*GSMFPG
Trigger: TCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTG...ACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAA +
Preference number: 2 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLLPIPS*ACHEAK
Trigger: TTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAG...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp AAAAGCCTGTCTCTTCAGCATGTGGTAGGCGTCTTTGATCTTTGCTTCTTCTGGAGGTACGTCAGGGCCTaGAGCGCCTCCCATTCCTGT +
Preference number: 2 (lower is better)
Translates to: KSLSLQHVVGVFDLCFFWRYVRA*SASHSC
Trigger: ACAGGAATGGGAGGCGCTCCAGGCCCTGACGTACCT...CCAGAAGAAGCAAAGATCAAAGACGCCTACCACATGCTGAAGAGACAGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577435.5
3UTR-3UTR CCA 90 bp TGCAGGATGTCCCCCAAACTGTTATCATTGTCCTCAGTCTCACTGGCGAGTTTAGATCACAGCGTCCTCTaGGGTCATAGGTTCCCCCAC +
Preference number: 2 (lower is better)
Translates to: CRMSPKLLSLSSVSLASLDHSVL*GHRFPH
Trigger: GTGGGGGAACCTATGACCCCAGAGGACGCTGTGATC...TAAACTCGCCAGTGAGACTGAGGACAATGATAACAGTTTGGGGGACATCCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGAGCAATAGGGTCTGGTaGCTCAGCTCAAGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQESNRVW*LSSSVA
Trigger: GGCCACACTTGAGCTGAGTCACCAGACCCTATTGCT...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp CCATTTCCACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTCCAGGGCTGGGGACTTTaGAGTATGCCAGTTCCTTAT +
Preference number: 2 (lower is better)
Translates to: PFPHSNSTDIPRAAAASLQGWGL*SMPVPY
Trigger: ATAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTG...GAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTGGAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp TTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTTTCCAAATTCCATGTCCTaGCAAGATGTCCATAGGACA +
Preference number: 2 (lower is better)
Translates to: LFTWAPQASPVSMAAGDFPNSMS*QDVHRT
Trigger: TGTCCTATGGACATCTTGGCAGGACATGGAATTTGG...AAAATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR GCA 90 bp CAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAC +
Preference number: 2 (lower is better)
Translates to: QDVHRTQPATARDKHTTHVPEGG*NFTFID
Trigger: GTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...ATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp GCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTTCGCCATTGATGACCTaGCCTTCAATAATTGTTTTG +
Preference number: 2 (lower is better)
Translates to: ACSPGLRKLPPCLWQLVISPLMT*PSIIVL
Trigger: CAAAACAATTATTGAAGGGCAGGTCATCAATGGCGA...AATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp CAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGAGGTCATCTGGGTTTTTaGTTTTCAGCAGCTTGGCTA +
Preference number: 2 (lower is better)
Translates to: QCPSVAGEQLRFLGSTLGGHLGF*FSAAWL
Trigger: TAGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACC...TCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CCA 90 bp CCATTTCCACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTCCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAA +
Preference number: 2 (lower is better)
Translates to: PFPHSNSTDIPRAAAASLLPIPS*ACHEAK
Trigger: TTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAG...GAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTGGAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTGAGAAGGGGAAATACTaGCTCTCTTCATTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFEKGKY*LSSFSF
Trigger: GAAGGAAAATGAAGAGAGCCAGTATTTCCCCTTCTC...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp TCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACATCGCAGCAGCCAGTCTCTaGAAAGCTCTTGGATTTATT +
Preference number: 2 (lower is better)
Translates to: SGDSAQVWPDLITSRPNIAAASL*KALGFI
Trigger: AATAAATCCAAGAGCTTTCCAGAGACTGGCTGCTGC...GATGTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp CCAGCTGTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCTATTCCCAGTCCTCCTaGCGGTTGGAAGGATTGGTG +
Preference number: 2 (lower is better)
Translates to: PAVQQLNNLGLHFLRHPVYSQSS*RLEGLV
Trigger: CACCAATCCTTCCAACCGCCAGGAGGACTGGGAATA...GACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTACAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577435.5
ENST00000621870.4
3UTR-3UTR CCA 90 bp CCGGGAGAGGTTGTCACTGGCTTGCAGGATGTCCCCCAAACTGTTATCATTGTCCCTATCCACAGGAATTaGTGGGTCAGACTGCACTAT +
Preference number: 2 (lower is better)
Translates to: PGEVVTGLQDVPQTVIIVPIHRN*WVRLHY
Trigger: ATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGG...GACAATGATAACAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CCA 90 bp ACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACAGGTCCATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: TPDSIWPLQVTQVDKNRSMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...GGACCTGTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR GCA 90 bp CAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACCTCAACAGAAAGCTGAGTACCTaGTTCTGGAGAAGGGGAAAT +
Preference number: 2 (lower is better)
Translates to: QQSWDIQYSHLPRSTDLNRKLST*FWRRGN
Trigger: ATTTCCCCTTCTCCAGAAGCAGGTACTCAGCTTTCT...GTTGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTGCCTGGCTTCAAGGTaGAGATCACAGCGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYCLASR*RSQRPL
Trigger: CAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR TCA 90 bp AATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACGTCAGGGCAGCTCCTTGTTGATCTaGTCACAGAAGCCAATTATG +
Preference number: 2 (lower is better)
Translates to: NNLGLHFLRHPVPQVRQGSSLLI*SQKPIM
Trigger: CATAATTGGCTTCTGTGATCAGATCAACAAGGAGCT...GCCCTGACGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577435.5
3UTR-3UTR TCA 90 bp TTATCATTGTCCTCAGTCTCACTGGCGAGTTTAAATAAAGTCCGCCTCTTGTTCGCAGCACGATGCTCTTaGCAGGTAAGGGAGCCGTGT +
Preference number: 2 (lower is better)
Translates to: LSLSSVSLASLNKVRLLFAARCS*QVREPC
Trigger: ACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGC...GAACAAGAGGCGGACTTTATTTAAACTCGCCAGTGAGACTGAGGACAATGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCACCCCTGACAGCATATaGCCACTTCAAGTCACACAG +
Preference number: 2 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFTPDSI*PLQVTQ
Trigger: CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CCA 90 bp CCCTTGGGCCGTGCATCTGTCAGGTGTGAGGATGTGGCTCTTGTGGGGAATGACTCTCTGGAAAGCTCTTaGATTTATTCCTTAAGTAGT +
Preference number: 2 (lower is better)
Translates to: PLGRASVRCEDVALVGNDSLESS*IYSLSS
Trigger: ACTACTTAAGGAATAAATCCAAGAGCTTTCCAGAGA...GTCATTCCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GTTGGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACATTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 2 (lower is better)
Translates to: VGPVMRPNSMSCQDVHRTFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...TGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATCACCTTCTCCTTCAGTaGATTGGCCAGCAACATGAC +
Preference number: 2 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYHLLLQ*IGQQHD
Trigger: GTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTG...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATCACTTTCATTGACTTaGGCACTGCAGCCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: GEQLRFLGSTLGHMSSVTSLSLT*ALQPAA
Trigger: TGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGA...TGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CCA 90 bp GAGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTTTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 2 (lower is better)
Translates to: ESSVPEGGCNFTFIDLGTFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...AGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp CAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACCTCAACTTGGAGAGACGACTTTaGTTAACTCATTCAAAAAGC +
Preference number: 2 (lower is better)
Translates to: QQSWDIQYSHLPRSTDLNLERRL*LTHSKS
Trigger: GCTTTTTGAATGAGTTAATCAAAGTCGTCTCTCCAA...GTTGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CCA 90 bp GGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 2 (lower is better)
Translates to: GEQLRFLGSTLGHMSSVTFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...TGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR TCA 90 bp CAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGCTCTTGTTCTCACACTaGTCAAACAGCTCCTTCATC +
Preference number: 2 (lower is better)
Translates to: QLRFLGSTLGHMSSVTFVLLFSH*SNSSFI
Trigger: GATGAAGGAGCTGTTTGATCAGTGTGAGAACAAGAG...CACAAATGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR GCA 72 bp CCTGGGACTGGAAACTCAGTGGCTGGAAGAGCGGGCTaGCGGGCCCCGTGGAGAAGGGCAGGAGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: PGTGNSVAGRAG*RAPWRRAGGAW
Trigger: CCAGGCCCCTCCTGCCCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCAGTCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR TCA 72 bp CGGAGGCGCCACAGGCAGCGGTCCCCGGCCTGGGGCTaGAGAAGTCCAGGTCGGACTGTTCCCTCTGGAGCA +
Preference number: 3 (lower is better)
Translates to: RRRHRQRSPAWG*RSPGRTVPSGA
Trigger: TGCTCCAGAGGGAACAGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGACCGCTGCCTGTGGCGCCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR GCA 72 bp GCTGATCGAGGGCATCCAGGTGGTGCAGCGCGCTGTTaGCCAACGCCAAGCCATGGTGCCCAGGGACTGCGG +
Preference number: 3 (lower is better)
Translates to: ADRGHPGGAARC*PTPSHGAQGLR
Trigger: CCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGATCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CCA 72 bp TTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTaGGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGC +
Preference number: 3 (lower is better)
Translates to: LFWARHLPGPPP*GWQQELVGGGS
Trigger: GCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR CCA 72 bp AGGTGGTGCAGCGCGCTGTTGCCCAACGCCAAGCCATaGTGCCCAGGGACTGCGGGCTCAACTTTTGGGGCC +
Preference number: 3 (lower is better)
Translates to: RWCSALLPNAKP*CPGTAGSTFGA
Trigger: GGCCCCAAAAGTTGAGCCCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR GCA 72 bp GGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTaGAACAGGGCTGCAGCCCCTTGGGCCGTGCATCTG +
Preference number: 3 (lower is better)
Translates to: GSRSWLAGEAWN*NRAAAPWAVHL
Trigger: CAGATGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR GCA 72 bp TGGTGCAGCGCGCTGTTGCCCAACGCCAAGCCATGGTaGCCAGGGACTGCGGGCTCAACTTTTGGGGCCAAG +
Preference number: 3 (lower is better)
Translates to: WCSALLPNAKPW*PGTAGSTFGAK
Trigger: CTTGGCCCCAAAAGTTGAGCCCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CCA 72 bp GGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTaGCTTCAAGGTGGAGATCACAGCGTCCTCTGGGGT +
Preference number: 3 (lower is better)
Translates to: GTRALLVSGQPA*LQGGDHSVLWG
Trigger: ACCCCAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CAA 90 bp CAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCCAGGGCTGCAGCCCCTaGGGCCGTGCATCTGTCAGG +
Preference number: 3 (lower is better)
Translates to: QLITPWPFQDDAVHQRQGQGCSP*GRASVR
Trigger: CCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCTG...GCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CAA 90 bp AACTCAGTGGCTGGAAGAGCGGGCTGCCGGGCCCCGTGGAGAAGGGCAGGAGGGGAGGTTGTCACTGGCTaGCAGGATGTCCCCCAAACT +
Preference number: 3 (lower is better)
Translates to: NSVAGRAGCRAPWRRAGGEVVTG*QDVPQT
Trigger: AGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTC...CCCTCCTGCCCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGCCACTGAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CAA 90 bp GGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGTGGTGCAGCGCGCTGTaGCCCAACGCCAAGCCATGG +
Preference number: 3 (lower is better)
Translates to: GMAAGAGWRGKHGIATGLWCSAL*PNAKPW
Trigger: CCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACCA...CAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CAA 90 bp CAGCTCTCTGTCCCCGTCCGAAGAGTCCTCCTGGCTGTAATGAAGCAGCATCTCCAGGGCTGCAGCCCCTaGGGCCGTGCATCTGTCAGG +
Preference number: 3 (lower is better)
Translates to: QLSVPVRRVLLAVMKQHLQGCSP*GRASVR
Trigger: CCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCTG...GAGATGCTGCTTCATTACAGCCAGGAGGACTCTTCGGACGGGGACAGAGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CAA 90 bp CTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTACGGAGGACAAACTGTaGGTCGTGTCCAGCTCCGCA +
Preference number: 3 (lower is better)
Translates to: LVGGGSMELQQGCSPLGRTEDKL*VVSSSA
Trigger: TGCGGAGCTGGACACGACCAACAGTTTGTCCTCCGT...ACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR GCA 72 bp CTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTaGAGCCCCTTGGGCCGTGCATCTGTCAGGTGTGAG +
Preference number: 3 (lower is better)
Translates to: LVGGGSMELQQG*SPLGRASVRCE
Trigger: CTCACACCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR CCA 72 bp GGGCTGGGGACTTTGCAGTATGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGGCCACCTCCCTGGGGA +
Preference number: 3 (lower is better)
Translates to: GLGTLQYASSLF*ARHLPGPPPWG
Trigger: TCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGCATACTGCAAAGTCCCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
3UTR CCA 72 bp GGGCTGGGGACTTTGCAGTATGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGGCCACCTCCGCCAAGC +
Preference number: 3 (lower is better)
Translates to: GLGTLQYASSLF*ARHLPGPPPPS
Trigger: GCTTGGCGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGCATACTGCAAAGTCCCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649398.1
3UTR-3UTR CAA 90 bp CTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTCCCAGAGATGTCCGATaGCTGAGCTTGTTCACCTGG +
Preference number: 3 (lower is better)
Translates to: LVGGGSMELQQGCSPLGRPRDVR*LSLFTW
Trigger: CCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGG...ACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR TCA 72 bp CCACCGGGAGGATGGCCCTGGGGCCCTCAGGGTCGCTaGACTTCACTGAGTACCTCCAACTCAGGGTTCTTT +
Preference number: 3 (lower is better)
Translates to: PPGGWPWGPQGR*TSLSTSNSGFF
Trigger: AAAGAACCCTGAGTTGGAGGTACTCAGTGAAGTTCAGCGACCCTGAGGGCCCCAGGGCCATCCTCCCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621217.4
3UTR TCA 72 bp AGCCCCGCCTTGCCTGAGGAGGGGTCAGGTGACAAGTaGCATCAATGGGTGAAGGCGCCGGGAGAAGCTGTT +
Preference number: 3 (lower is better)
Translates to: SPALPEEGSGDK*HQWVKAPGEAV
Trigger: AACAGCTTCTCCCGGCGCCTTCACCCATTGATGTCACTTGTCACCTGACCCCTCCTCAGGCAAGGCGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621217.4
3UTR CCA 72 bp GGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTaGGCCGTGCATCTGTCAGGTGTGAGGATGTGGCTC +
Preference number: 3 (lower is better)
Translates to: GEAWNCNRAAAP*AVHLSGVRMWL
Trigger: GAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR CCA 72 bp CCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCCTCTaGGGTCATAGGTTCCCCCACTGTTCCACAGGAGGG +
Preference number: 3 (lower is better)
Translates to: PAWLQGGDHSVL*GHRFPHCSTGG
Trigger: CCCTCCTGTGGAACAGTGGGGGAACCTATGACCCCAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CAA 90 bp CCACCTCCCTGGGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGTCCTTCACCATGGACTaGATGAGCTTGTTGGCCTCC +
Preference number: 3 (lower is better)
Translates to: PPPWGWQQELVGGGSMELSFTMD*MSLLAS
Trigger: GGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGA...CAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCCCAGGGAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR TCA 72 bp TCAAAGCTACAAGCACTGTTGTCAGGGCATGGAGAGTaGCGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: SKLQALLSGHGE*RDQSPPRLRAA
Trigger: GGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGTGCTTGTAGCTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR TCA 72 bp TGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTaGGCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCG +
Preference number: 3 (lower is better)
Translates to: CATFLSPEMSDC*ACSPGLRKLPP
Trigger: CGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR GCA 72 bp GGCAAGGGGCAGGGAGGAACCAGGGAACATGGTCTGTaGCACCTTCCTTTCCCCAGAGATGTCCGATTGCTG +
Preference number: 3 (lower is better)
Translates to: GKGQGGTREHGL*HLPFPRDVRLL
Trigger: CAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCTGGTTCCTCCCTGCCCCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CCA 72 bp CCACTGCCAGGGACAAGCACACAACTCATCACTCCGTaGCCATTCCAGGACGATGCTGTCCACCAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: PLPGTSTQLITP*PFQDDAVHQRQ
Trigger: CTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CCA 72 bp GAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTaGCTGGGACAAGCTGGCGGGGGCCAAGCACTGTTG +
Preference number: 3 (lower is better)
Translates to: EYMSQDHIQQLE*LGQAGGGQALL
Trigger: CAACAGTGCTTGGCCCCCGCCAGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CAA 90 bp AGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTTTCTCCTTCAGTGGATaGGCCAGCAACATGACCTGG +
Preference number: 3 (lower is better)
Translates to: SPPRLRAACLASRWRSQRFSFSG*ASNMTW
Trigger: CCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAA...ACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR CCA 72 bp GCCCCTTGGGCCGTGCATCTGTCAGGTGTGAGGATGTaGCTCTTGTGGGGAATGACCCATGACAGTCTCTCT +
Preference number: 3 (lower is better)
Translates to: APWAVHLSGVRM*LLWGMTHDSLS
Trigger: AGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR CCA 72 bp CAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTaGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGC +
Preference number: 3 (lower is better)
Translates to: QEVVSRMACPHG*RHAFPRKLSTC
Trigger: GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CCA 72 bp TTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCACCTaGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCT +
Preference number: 3 (lower is better)
Translates to: FPRDVRLLSLFT*APQASPVSMAA
Trigger: AGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CAA 90 bp TGTCACAGGAAGGGCACTGCTAGGCTTGATCGATTCCAGGGGCACGTGGATGCTAACGTGTGCAGACGCTaGGTCACCTTCTGGATCCGT +
Preference number: 3 (lower is better)
Translates to: CHRKGTARLDRFQGHVDANVCRR*VTFWIR
Trigger: ACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTT...AGCATCCACGTGCCCCTGGAATCGATCAAGCCTAGCAGTGCCCTTCCTGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR TCA 72 bp TTGACTTGGGCACTGCAGCCTGCAGCACGATGCTCTTaGCAGGTAAGGGAGCCGTGTTCAGCATGGACACCA +
Preference number: 3 (lower is better)
Translates to: LTWALQPAARCS*QVREPCSAWTP
Trigger: TGGTGTCCATGCTGAACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAAGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR CCA 72 bp CCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTaGGGACTTTGCAGTATGCCAGTTCCTTATTCTGGG +
Preference number: 3 (lower is better)
Translates to: PFQDDAVHQRQG*GLCSMPVPYSG
Trigger: CCCAGAATAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CCA 72 bp TCCAGGTCGGACTGTTCCCTCTGGAGCAGGTGCCACTaGCTGTTCCCAGCTGACTCTTTGGGAGGAACATTA +
Preference number: 3 (lower is better)
Translates to: SRSDCSLWSRCH*LFPADSLGGTL
Trigger: TAATGTTCCTCCCAAAGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCAGAGGGAACAGTCCGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CAA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGTATCACAGCAGCAGTTaGGTTCTCAGCAGAAATGCC +
Preference number: 3 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLYHSSS*VLSRNA
Trigger: GGCATTTCTGCTGAGAACCAAACTGCTGCTGTGATA...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CAA 90 bp GATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTTTTTGTGACGGAGGCTaGGAGTACATGTCCCAGGAT +
Preference number: 3 (lower is better)
Translates to: DVRLLSLFTWAPQASPVSFCDGG*EYMSQD
Trigger: ATCCTGGGACATGTACTCCAAGCCTCCGTCACAAAA...AGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CAA 90 bp ACCAGGGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGCCCAGAGATGTCCGATaGCTGAGCTTGTTCACCTGG +
Preference number: 3 (lower is better)
Translates to: TREHGLCHLPFPRDVRLLPRDVR*LSLFTW
Trigger: CCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGG...CAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR TCA 72 bp ATCCACAGGAATTGGTGGGTCAGACTGCACTATGCCTaGAAGGGGACATGGCAGCACGTGCACTCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: IHRNWWVRLHYA*KGTWQHVHSGC
Trigger: ACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
3UTR GCA 72 bp TCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATaGCTGAAAGGGGACATGGCAGCACGTGCACTCAGG +
Preference number: 3 (lower is better)
Translates to: SYPQELVGQTAL*LKGDMAARALR
Trigger: CCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
3UTR GCA 72 bp ATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTaGACTATGCCTGAAAGGGGACATGGCAGCACGTGC +
Preference number: 3 (lower is better)
Translates to: ISVLSTGIGGSD*TMPERGHGSTC
Trigger: GCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
3UTR CCA 72 bp TTCCACATCAAAGCTACAAGCACTGTTGTCAGGGCATaGAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAG +
Preference number: 3 (lower is better)
Translates to: FHIKATSTVVRA*RVTGPEPSSSQ
Trigger: CTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGTGCTTGTAGCTTTGATGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CCA 72 bp AGACCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTaGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGG +
Preference number: 3 (lower is better)
Translates to: RPNISLTVPLSS*GTVEVSGQHIR
Trigger: CCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CCA 72 bp TGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTaGTGGGTCAGACTGCACTATGCCCTGTCTCTTCAG +
Preference number: 3 (lower is better)
Translates to: WWRGDQRPIHRN*WVRLHYALSLQ
Trigger: CTGAAGAGACAGGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CAA 90 bp AGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGTATCACAGCAGCAGTTaGGTTCTCAGCAGAAATGCC +
Preference number: 3 (lower is better)
Translates to: SQGPLRTPDSIWPLQVTQYHSSS*VLSRNA
Trigger: GGCATTTCTGCTGAGAACCAAACTGCTGCTGTGATA...CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR GCA 72 bp TGCAACTTCACTTTCATTGACTTGGGCACTGCAGCCTaGAGCACGATGCTCTTGACAGGTAAGGGAGCCGTG +
Preference number: 3 (lower is better)
Translates to: CNFTFIDLGTAA*STMLLTGKGAV
Trigger: CACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR CCA 72 bp ACTTCCTCTAACGTGTGCAGACGCTTGGTCACCTTCTaGATCCGTGCCTCGTCTTCCTTCACCATGGACTTG +
Preference number: 3 (lower is better)
Translates to: TSSNVCRRLVTF*IRASSSFTMDL
Trigger: CAAGTCCATGGTGAAGGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CAA 90 bp CAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTA +
Preference number: 3 (lower is better)
Translates to: QQLNNLGLHFLRHPVPQVQSSWR*EGLVAL
Trigger: TAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTG...TACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577435.5
ENST00000621870.4
3UTR-3UTR CAA 90 bp GAGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTTGCAGCACGATGCTCTaGACAGGTAAGGGAGCCGTG +
Preference number: 3 (lower is better)
Translates to: ESSVPEGGCNFTFIDLGTCSTML*TGKGAV
Trigger: CACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCA...AGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR TCA 72 bp ACAAACTGTTGGTCGTGTCCAGCTCCGCAAGGTCGATaGGCGTGCCTTGGTTACTGCACTGACTGTTTCCTT +
Preference number: 3 (lower is better)
Translates to: TNCWSCPAPQGR*ACLGYCTDCFL
Trigger: AAGGAAACAGTCAGTGCAGTAACCAAGGCACGCTCATCGACCTTGCGGAGCTGGACACGACCAACAGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR GCA 72 bp GGGCTAAATGGAGAGAGTTCTGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGACTTGGGCACTGCAGCC +
Preference number: 3 (lower is better)
Translates to: GLNGESSVPEGG*NFTFIDLGTAA
Trigger: GGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCTCTCCATTTAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
3UTR GCA 72 bp AGCAGTCTCACGTTGTTGTTAACTTCCTCTAACGTGTaGAGACGCTTGGTCACCTTCTGGATCCGTGCCTCG +
Preference number: 3 (lower is better)
Translates to: SSLTLLLTSSNV*RRLVTFWIRAS
Trigger: CGAGGCACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGTTAACAACAACGTGAGACTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CCA 72 bp GCCGTGCATCTGTCAGGTGTGAGGATGTGGCTCTTGTaGGGAATGACCCATGACAGTCTCTCTTTAGAGACT +
Preference number: 3 (lower is better)
Translates to: AVHLSGVRMWLL*GMTHDSLSLET
Trigger: AGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CAA 90 bp CAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGATATCACAGCAGCAGTTaGGTTCTCAGCAGAAATGCC +
Preference number: 3 (lower is better)
Translates to: QCPSVAGEQLRFLGSTLGYHSSS*VLSRNA
Trigger: GGCATTTCTGCTGAGAACCAAACTGCTGCTGTGATA...TCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CAA 90 bp CCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTTATCACAGCAGCAGTTaGGTTCTCAGCAGAAATGCC +
Preference number: 3 (lower is better)
Translates to: PNISLTVPLSSWGTVEVSYHSSS*VLSRNA
Trigger: GGCATTTCTGCTGAGAACCAAACTGCTGCTGTGATA...AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CAA 90 bp CCAGCTGTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCAACGTGTGCAGACGCTaGGTCACCTTCTGGATCCGT +
Preference number: 3 (lower is better)
Translates to: PAVQQLNNLGLHFLRHPVNVCRR*VTFWIR
Trigger: ACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTT...GACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTACAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CAA 90 bp AGGATGTGGCTCTTGTGGGGAATGACCCATGACAGTCTCTCTTTAGAGACTCCCTTCCCAGCTGACTCTTaGGGAGGAACATTAGGGGCT +
Preference number: 3 (lower is better)
Translates to: RMWLLWGMTHDSLSLETPFPADS*GGTLGA
Trigger: AGCCCCTAATGTTCCTCCCAAAGAGTCAGCTGGGAA...GGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR-3UTR CAA 90 bp AGGATGTGGCTCTTGTGGGGAATGACCCATGACAGTCTCTCTTTAGAGACTCCCGACTTGATGAGCTTGTaGGCCTCCTGCAGGTCATCT +
Preference number: 3 (lower is better)
Translates to: RMWLLWGMTHDSLSLETPDLMSL*ASCRSS
Trigger: AGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTC...GGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CAA 90 bp TGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCCAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTA +
Preference number: 3 (lower is better)
Translates to: CRVAVDSKGRIAVYFMPSQSSWR*EGLVAL
Trigger: TAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTG...GCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR TCA 72 bp TGCTTGCTAAAGACAGCGAGGGGCAGGGAAGGGATATaGCCTCTTCCCATAGTAAGGAATAAGGAAGCCTGG +
Preference number: 3 (lower is better)
Translates to: CLLKTARGREGI*PLPIVRNKEAW
Trigger: CCAGGCTTCCTTATTCCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCCCCTCGCTGTCTTTAGCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR TCA 72 bp ACGGCGATCTGTGGCCCTTCCAGCTCCTTGTTGATCTaGTCACAGAAGCCAATTATGTATTCCCAGTCCTCC +
Preference number: 3 (lower is better)
Translates to: TAICGPSSSLLI*SQKPIMYSQSS
Trigger: GGAGGACTGGGAATACATAATTGGCTTCTGTGATCAGATCAACAAGGAGCTGGAAGGGCCACAGATCGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577435.5
ENST00000621870.4
3UTR GCA 72 bp AAGGGCAGCAGAGCTGGGATATCCAGTACAGCCATTTaGCACGAAGCACTGACCTCAACAGTAACGAGTAAC +
Preference number: 3 (lower is better)
Translates to: KGSRAGISSTAI*HEALTSTVTSN
Trigger: GTTACTCGTTACTGTTGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CAA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTGCTTTTCAGCAGCTaGGCTAAAAGCTTGGACTTC +
Preference number: 3 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLLLFSS*AKSLDF
Trigger: GAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCAA...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CAA 90 bp GCTAAAGACAGCGAGGGGCAGGGAAGGGATATGACCTCTTCCCATAGTAAGGAAAGGTCATCTGGGTTTTaGCTTTTCAGCAGCTTGGCT +
Preference number: 3 (lower is better)
Translates to: AKDSEGQGRDMTSSHSKERSSGF*LFSSLA
Trigger: AGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACCT...TTCCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCCCCTCGCTGTCTTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CAA 90 bp AGGATGTGGCTCTTGTGGGGAATGACCCATGACAGTCTCTCTTTAGAGACTCCCAGCTTGGCTAAAAGCTaGGACTTCTCCTCATCATCA +
Preference number: 3 (lower is better)
Translates to: RMWLLWGMTHDSLSLETPSLAKS*DFSSSS
Trigger: TGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGCT...GGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CAA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGCAACTTCACTTTCATaGACTTGGGCACTGCAGCCT +
Preference number: 3 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQEATSLS*TWALQP
Trigger: AGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGC...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR TCA 72 bp GCGAGTTTAAATAAAGTCCGCCTCTTGTTCTCACACTaGTCAAACAGCTCCTTCATCAGCTCTCTGTCCCCG +
Preference number: 3 (lower is better)
Translates to: ASLNKVRLLFSH*SNSSFISSLSP
Trigger: CGGGGACAGAGAGCTGATGAAGGAGCTGTTTGATCAGTGTGAGAACAAGAGGCGGACTTTATTTAAACTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR CCA 72 bp ATACTGGCTCTCTTCATTTTCCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCA +
Preference number: 3 (lower is better)
Translates to: ILALFIFLPIPS*ACHEAKFHVLP
Trigger: TGGCAGGACATGGAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGCCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CAA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGTATCACAGCAGCAGTTaGGTTCTCAGCAGAAATGCC +
Preference number: 3 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQEYHSSS*VLSRNA
Trigger: GGCATTTCTGCTGAGAACCAAACTGCTGCTGTGATA...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR-3UTR CAA 90 bp AGCATCTCACTGAGCAGTCTCACGTTGTTGTTAACTTCCTCTAACGTGTGCAGATCCTATCCACAGGAATaGGTGGGTCAGACTGCACTA +
Preference number: 3 (lower is better)
Translates to: SISLSSLTLLLTSSNVCRSYPQE*VGQTAL
Trigger: TAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGA...TCTGCACACGTTAGAGGAAGTTAACAACAACGTGAGACTGCTCAGTGAGATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR-3UTR CAA 90 bp CAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGTTCACTTTCATTGACTaGGGCACTGCAGCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: QLRFLGSTLGHMSSVTFVFTFID*GTAACS
Trigger: GCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAA...CACAAATGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
3UTR TCA 72 bp GATTCACTTTTGACTTGTCCTCTTCTAATGAAGCAGTaGAACCTGCTTGCTAAAGACAGCGAGGGGCAGGGA +
Preference number: 3 (lower is better)
Translates to: DSLLTCPLLMKQ*NLLAKDSEGQG
Trigger: TCCCTGCCCCTCGCTGTCTTTAGCAAGCAGGTTTCACTGCTTCATTAGAAGAGGACAAGTCAAAAGTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TGGAAACTCAGTGGCTGGAAGAGCGGGCTGCCGGGCCCCGTGGAGAAGGGCAGGGGGCGTTGCTTGTGCTaGTGGGCCCCAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: WKLSGWKSGLPGPVEKGRGRCLC*WAPGWP
Trigger: AGGCCACCCTGGGGCCCAGCAGCACAAGCAACGCCC...CCTGCCCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp TGGAAACTCAGTGGCTGGAAGAGCGGGCTGCCGGGCCCCGTGGAGAAGGGCAGGGAGGGGGCTGAGGGCTaGAGCAGAGGAGCATCGGAG +
Preference number: 4 (lower is better)
Translates to: WKLSGWKSGLPGPVEKGREGAEG*SRGASE
Trigger: CTCCGATGCTCCTCTGCTCCAGCCCTCAGCCCCCTC...CCTGCCCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGGCGTTGCTTGTGCTaGTGGGCCCCAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: ESDGTRALLVSGQPAWLQGRCLC*WAPGWP
Trigger: AGGCCACCCTGGGGCCCAGCAGCACAAGCAACGCCC...TTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTGCTGGAAGAGCGGGCTaGCGGGCCCCGTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAAGRAG*RAPWRR
Trigger: CCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGC...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCGGTCCCCGGCCTGGGGCTGAAGAAGTCCAGGTCGGACTGTTCCCTCTGGAGCTGGGGGCAGGAACACTaGCTGGGACCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AVPGLGLKKSRSDCSLWSWGQEH*LGPQEL
Trigger: CAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCCCCCA...GCTCCAGAGGGAACAGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGACCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGGGCATGGAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTCACCTCCGCCAAGCCTaGGGGTCCATGTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: RAWRVTGPEPSSSQGSLPHLRQA*GSMFPG
Trigger: TCCCGGGAACATGGACCCCCAGGCTTGGCGGAGGTG...AGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649398.1
CDS-3UTR TCA 90 bp CTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTTTCCCGGGACAGCAGTaGAGTCAGGGGCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: LVGGGSMELQQGCSPLGRFPGQQ*SQGPLR
Trigger: GCGGAGTGGCCCCTGACTTCACTGCTGTCCCGGGAA...ACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CGGGACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCCCGGGACAGCAGTaGAGTCAGGGGCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: RDSSEVRGHSAPLTAYGHFPGQQ*SQGPLR
Trigger: GCGGAGTGGCCCCTGACTTCACTGCTGTCCCGGGAA...GTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCAGGAGGAGCCCGCACTaGGGGCAGGAACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVRRSPH*GQEHWL
Trigger: CAGCCAGTGTTCCTGCCCCCAGTGCGGGCTCCTCCT...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CGGGACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTCGAGGGCATCCAGGTaGTGCAGCGCGCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: RDSSEVRGHSAPLTAYGHSRASR*CSALLP
Trigger: GGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGA...GTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCTCGAGGGCATCCAGGTaGTGCAGCGCGCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: SWLAGEAWNCNRAAAPWASRASR*CSALLP
Trigger: GGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGA...GGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCAGGGGCACGTGGATGCTaGCCAGGGAGAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: DQSPPRLRAACLASRWRSGARGC*PGRAQA
Trigger: GGCCTGAGCTCTCCCTGGCCAGCATCCACGTGCCCC...TGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTGGGGCACGTGGATGCTaGCCAGGGAGAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAGARGC*PGRAQA
Trigger: GGCCTGAGCTCTCCCTGGCCAGCATCCACGTGCCCC...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACGGGGCACGTGGATGCTaGCCAGGGAGAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TRALLVSGQPAWLQGGDHGARGC*PGRAQA
Trigger: GGCCTGAGCTCTCCCTGGCCAGCATCCACGTGCCCC...GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGTTCCCGGGACAGCAGTaGAGTCAGGGGCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: LITPWPFQDDAVHQRQGWFPGQQ*SQGPLR
Trigger: GCGGAGTGGCCCCTGACTTCACTGCTGTCCCGGGAA...CCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CTTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTGGGGATGGCAGCAGGAAGGGCTGCAGGGATCTaGGTAGCGACAGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LILGQAPSWATSLGMAAGRAAGI*VATAAR
Trigger: CCTGGCAGCTGTCGCTACTCAGATCCCTGCAGCCCT...TCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR GCA 90 bp GAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGAGGGTGGAGTAGGTaGTGGGGCCAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: ESDGTRALLVSGQPAWLQGGWSR*WGQHGG
Trigger: TCCTCCGTGTTGGCCCCAGCACCTACTCCACCCTCC...TTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCGGGCGTTGCTTGTGCTaGTGGGCCCCAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTGRCLC*WAPGWP
Trigger: AGGCCACCCTGGGGCCCAGCAGCACAAGCAACGCCC...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CTTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTGGGGATGGCAGCAGGAAGGGCATCCAGGTGGTaGAGCGCGCTGTTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LILGQAPSWATSLGMAAGRASRW*SALLPN
Trigger: GTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCT...TCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCAGGGCATCCAGGTGGTaGAGCGCGCTGTTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVRASRW*SALLPN
Trigger: GTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCT...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCGCTGGAAGAGCGGGCTaGCGGGCCCCGTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PCPAKMSIGHSLPLPGTSAGRAG*RAPWRR
Trigger: CCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGC...GCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCGACCTGGGTGATGGCTaGAGGTGGCTGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVDLGDG*RWLDGA
Trigger: AGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTC...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCACCTCTGTGCTCAGCTaGTCCCCCAGGGCGAAGGTC +
Preference number: 4 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVTSVLS*SPRAKV
Trigger: GACCTTCGCCCTGGGGGAGCAGCTGAGCACAGAGGT...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCAGGGTGGCCTCGGCCTaGCTAGAGGAGCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCRVASA*LEERLR
Trigger: ACGGAGCCGCTCCTCTAGCCAGGCCGAGGCCACCCT...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTCGTTGCTTGTGCTGCTaGGCCCCAGGGTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLRCLCC*APGWPR
Trigger: CCGAGGCCACCCTGGGGCCCAGCAGCACAAGCAACG...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGCGTTGCTTGTGCTGCTaGGCCCCAGGGTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LLPQGEGQLIPKPHLLLQRCLCC*APGWPR
Trigger: CCGAGGCCACCCTGGGGCCCAGCAGCACAAGCAACG...CTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCAGAGGGGGCTGAGGGCTaGAGCAGAGGAGCATCGGAG +
Preference number: 4 (lower is better)
Translates to: DQSPPRLRAACLASRWRSEGAEG*SRGASE
Trigger: CTCCGATGCTCCTCTGCTCCAGCCCTCAGCCCCCTC...TGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGAGGGGGCTGAGGGCTaGAGCAGAGGAGCATCGGAG +
Preference number: 4 (lower is better)
Translates to: PEPSSSQGSLPGFKVEITEGAEG*SRGASE
Trigger: CTCCGATGCTCCTCTGCTCCAGCCCTCAGCCCCCTC...TGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGCATGGGGGCAGGAACACTaGCTGGGACCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VGGGSMELQQGCSPLGRAWGQEH*LGPQEL
Trigger: CAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCCCCCA...TGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTAGGAGGAGCCCGCACTaGGGGCAGGAACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPPRLRAACLASRWRSQRRRSPH*GQEHWL
Trigger: CAGCCAGTGTTCCTGCCCCCAGTGCGGGCTCCTCCT...ACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTCCCAACGCCAAGCCATaGTGCCCAGGGACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLPNAKP*CPGTAG
Trigger: GCCCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGG...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTTCTAGAAGCTGATCGAGGGCATCCAGGTGGTGCAGCGCGCTGTTGCCCAACGCCCAACGCCAAGCCATaGTGCCCAGGGACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: LLEADRGHPGGAARCCPTPNAKP*CPGTAG
Trigger: GCCCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGG...CGTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGATCAGCTTCTAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGCATGGAAACTCAGTGGCTaGAAGAGCGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VGGGSMELQQGCSPLGRAWKLSG*KSGLPG
Trigger: GCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCA...TGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCGGGGCACGTGGATGCTaGCCAGGGAGAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QLITPWPFQDDAVHQRQGGARGC*PGRAQA
Trigger: GGCCTGAGCTCTCCCTGGCCAGCATCCACGTGCCCC...GCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGGGGCACGTGGATGCTaGCCAGGGAGAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: APPGRRSAYTEAAPSPSVGARGC*PGRAQA
Trigger: GGCCTGAGCTCTCCCTGGCCAGCATCCACGTGCCCC...CACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CAGGCAGCGGTCCCCGGCCTGGGGCTGAAGAAGTCCAGGTCGGACTGTTCCCTCGGTGATGGCTGCAGGTaGCTGGATGGGGCTAAATGG +
Preference number: 4 (lower is better)
Translates to: QAAVPGLGLKKSRSDCSLGDGCR*LDGAKW
Trigger: CCATTTAGCCCCATCCAGCCACCTGCAGCCATCACC...GAGGGAACAGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGACCGCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAAGGGCTGCAGCCCCTTaGGCCGTGCATCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ESDGTRALLVSGQPAWLQRAAAP*AVHLSG
Trigger: ACCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCT...TTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CGGGACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACAGGGCTGCAGCCCCTTaGGCCGTGCATCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RDSSEVRGHSAPLTAYGHRAAAP*AVHLSG
Trigger: ACCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCT...GTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CCACCTCCCTGGGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGGATGGCAGCAGGAGCTaGTTGGCGGGGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: PPPWGWQQELVGGGSMELDGSRS*LAGEAW
Trigger: CCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATC...CAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCCCAGGGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CTGAGGGCTGGAGCAGAGGAGCATCGGAGGCGCCACAGGCAGCGGTCCCCGGCCCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LRAGAEEHRRRHRQRSPALPIPS*ACHEAK
Trigger: TTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAG...GGCCGGGGACCGCTGCCTGTGGCGCCTCCGATGCTCCTCTGCTCCAGCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CTTCTAGAAGCTGATCGAGGGCATCCAGGTGGTGCAGCGCGCTGTTGCCCAACGCCCCAACAGTCACACTaGGGCCCCGCTCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LLEADRGHPGGAARCCPTPQQSH*GPAQGS
Trigger: GGAGCCCTGAGCGGGGCCCCAGTGTGACTGTTGGGG...CGTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGATCAGCTTCTAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS-3UTR TCA 90 bp GACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCTCCCCGGCCTGGGGCTaGAGAAGTCCAGGTCGGACT +
Preference number: 4 (lower is better)
Translates to: DSSEVRGHSAPLTAYGHFSPAWG*RSPGRT
Trigger: AGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGA...GAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTTCCCCGGCCTGGGGCTaGAGAAGTCCAGGTCGGACT +
Preference number: 4 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLSPAWG*RSPGRT
Trigger: AGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGA...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GCCAGTAGAAGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGTCCCCGGCCTGGGGCTaGAGAAGTCCAGGTCGGACT +
Preference number: 4 (lower is better)
Translates to: ASRRKQTPTPSLGVHVPGSPAWG*RSPGRT
Trigger: AGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGA...CCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCTTCTACTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCGCCACTCCGCACCCCTaGCAGCATATGGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVATPHP*QHMATS
Trigger: TGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGC...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGGCTGGAAGAGCGGGCTaGCGGGCCCCGTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GEGQLIPKPHLLLQWIGQAGRAG*RAPWRR
Trigger: CCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGC...CTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp CAGCTCTCTGTCCCCGTCCGAAGAGTCCTCCTGGCTGTAATGAAGCAGCATCTCGCTGGAAGAGCGGGCTaGCGGGCCCCGTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QLSVPVRRVLLAVMKQHLAGRAG*RAPWRR
Trigger: CCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGC...GAGATGCTGCTTCATTACAGCCAGGAGGACTCTTCGGACGGGGACAGAGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp ACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTGCTGGAAGAGCGGGCTaGCGGGCCCCGTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TQPATARDKHTTHHSVAIAGRAG*RAPWRR
Trigger: CCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGC...AATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGGACCTGGGTGATGGCTaGAGGTGGCTGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: LITPWPFQDDAVHQRQGWDLGDG*RWLDGA
Trigger: AGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTC...CCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGACCTCTGTGCTCAGCTaGTCCCCCAGGGCGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GMAAGAGWRGKHGIATGLTSVLS*SPRAKV
Trigger: GACCTTCGCCCTGGGGGAGCAGCTGAGCACAGAGGT...CAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp CACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCGCCCTAGCCCCGCCTTaGCTGAGGAGGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: HSLPLPGTSTQLITPWPFALAPP*LRRGQV
Trigger: CACCTGACCCCTCCTCAGGCAAGGCGGGGCTAGGGC...GAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS-3UTR CCA 90 bp GACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGACGCTTGGTCACCTTCTaGATCCGTGCCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: DGTRALLVSGQPAWLQGGRLVTF*IRASSS
Trigger: GGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCG...TCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGGGTGGAGTAGGTGCTaGGGCCAACACGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: LVGGGSMELQQGCSPLGRGWSRC*GQHGGQ
Trigger: TTGTCCTCCGTGTTGGCCCCAGCACCTACTCCACCC...ACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACTGGGACCACAGGAGCTaGGAAGGGAGGCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHWDHRS*EGRRQW
Trigger: CCACTGCCGCCTCCCTTCCCAGCTCCTGTGGTCCCA...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGGGCAGGAACACTGGCTaGGACCACAGGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: WLAGEAWNCNRAAAPWAVGRNTG*DHRSWE
Trigger: TTCCCAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCC...CACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGCCCAACGCCAAGCCATaGTGCCCAGGGACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SQGPLRTPDSIWPLQVTQPNAKP*CPGTAG
Trigger: GCCCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGG...CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCCTCTGGGGTCATAGGTTCCCCCAACGCCAAGCCATaGTGCCCAGGGACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SLPGFKVEITASSGVIGSPNAKP*CPGTAG
Trigger: GCCCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGG...GGAACCTATGACCCCAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTCGAGGGCATCCAGGTaGTGCAGCGCGCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTSRASR*CSALLP
Trigger: GGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGA...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTCGAGGGCATCCAGGTaGTGCAGCGCGCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCSRASR*CSALLP
Trigger: GGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGA...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCATGGAAACTCAGTGGCTaGAAGAGCGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: DQSPPRLRAACLASRWRSWKLSG*KSGLPG
Trigger: GCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCA...TGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTGGGGATGGCAGCAGGAGTCCACAGGAGGGAACTaGTCCACCTCGCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: LFWARHLPGPPPWGWQQESTGGN*STSPTS
Trigger: AGAGGTGGGCGAGGTGGACCAGTTCCCTCCTGTGGA...CTCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGGGCATGGAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTTCAGGGCAGCCTGCCTaGCTTCAAGGTGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: RAWRVTGPEPSSSQGSLPSGQPA*LQGGDH
Trigger: GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGA...AGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCAGATGGCAGCAGGAGCTaGTTGGCGGGGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: DQSPPRLRAACLASRWRSDGSRS*LAGEAW
Trigger: CCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATC...TGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTGATGGCAGCAGGAGCTaGTTGGCGGGGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: SPPRLRAACLASRWRSQRDGSRS*LAGEAW
Trigger: CCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATC...ACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGGCCTGTCCCCACGGCTaGAGGCACGCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GMAAGAGWRGKHGIATGLACPHG*RHAFPR
Trigger: TCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGC...CAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AACTCAGTGGCTGGAAGAGCGGGCTGCCGGGCCCCGTGGAGAAGGGCAGGAGGGCAAGGGCAGCAGAGCTaGGATATCCAGTACAGCCAT +
Preference number: 4 (lower is better)
Translates to: NSVAGRAGCRAPWRRAGGQGQQS*DIQYSH
Trigger: ATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG...CCCTCCTGCCCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGCCACTGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGGGCCAGGCACCTTCCTaGGCCACCTCCGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: VVSRMACPHGWRHAFPRKGQAPS*ATSAKP
Trigger: AGGCTTGGCGGAGGTGGCCCAGGAAGGTGCCTGGCC...CTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649398.1
CDS-3UTR TCA 90 bp ACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACGCTCCGCAAGGTCGATaGGCGTGCCTTGGTTACTGC +
Preference number: 4 (lower is better)
Translates to: TRALLVSGQPAWLQGGDHAPQGR*ACLGYC
Trigger: GCAGTAACCAAGGCACGCTCATCGACCTTGCGGAGC...GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTGCTCCGCAAGGTCGATaGGCGTGCCTTGGTTACTGC +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAAPQGR*ACLGYC
Trigger: GCAGTAACCAAGGCACGCTCATCGACCTTGCGGAGC...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACTCCCCGGCCTGGGGCTaGAGAAGTCCAGGTCGGACT +
Preference number: 4 (lower is better)
Translates to: GSGDSAQVWPDLITSRPNSPAWG*RSPGRT
Trigger: AGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGA...GTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp TGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGGCAGCACGATGCTCTTaGCAGGTAAGGGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: WLAGEAWNCNRAAAPWAVAARCS*QVREPC
Trigger: ACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGC...CACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CGGGACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACCCACATGCCATCTGGTaGGAGGAGAGGGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: RDSSEVRGHSAPLTAYGHPHAIW*EEREAK
Trigger: TTTGGCCTCCCTCTCCTCTCACCAGATGGCATGTGG...GTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGACCCAACATCTCGCTaGCAGTGCCCCTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: SWLAGEAWNCNRAAAPWADPTSR*QCPSVA
Trigger: AGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTC...GGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CTTGTGGGCCAGCAGTCGGACGGCGATCTGTGGCCCTTCCAGCTCCTTGTTGATAGGGCTGCAGGGATCTaGGTAGCGACAGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LVGQQSDGDLWPFQLLVDRAAGI*VATAAR
Trigger: CCTGGCAGCTGTCGCTACTCAGATCCCTGCAGCCCT...ATCAACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGACTGCTGGCCCACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577435.5
ENST00000621870.4
CDS-3UTR GCA 90 bp TCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGGGGCGTTGCTTGTGCTaGTGGGCCCCAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SMSCQDVHRTQPATARDKGRCLC*WAPGWP
Trigger: AGGCCACCCTGGGGCCCAGCAGCACAAGCAACGCCC...CTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTGGTGCAGCGCGCTGTTaGCCAACGCCAAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLGAARC*PTPSHG
Trigger: ACCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACC...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCAGGGCATCCAGGTGGTaGAGCGCGCTGTTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTRASRW*SALLPN
Trigger: GTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCT...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGGCTGGAAGAGCGGGCTaGCGGGCCCCGTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QIPCPAKMSIGHSLPLPGAGRAG*RAPWRR
Trigger: CCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGC...CCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCGCTGGAAGAGCGGGCTaGCGGGCCCCGTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FPQRCPIAELVHLGSASFAGRAG*RAPWRR
Trigger: CCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGC...GAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTGACCTGGGTGATGGCTaGAGGTGGCTGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLDLGDG*RWLDGA
Trigger: AGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTC...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGGACCTGGGTGATGGCTaGAGGTGGCTGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLDLGDG*RWLDGA
Trigger: AGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTC...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCGACCTGGGTGATGGCTaGAGGTGGCTGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: SCSPRAKVSLYRSRTFSFDLGDG*RWLDGA
Trigger: AGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTC...GAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp CTTCTAGAAGCTGATCGAGGGCATCCAGGTGGTGCAGCGCGCTGTTGCCCAACGGACCTGGGTGATGGCTaGAGGTGGCTGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLEADRGHPGGAARCCPTDLGDG*RWLDGA
Trigger: AGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTC...CGTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGATCAGCTTCTAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCACCTCTGTGCTCAGCTaGTCCCCCAGGGCGAAGGTC +
Preference number: 4 (lower is better)
Translates to: DSSEVRGHSAPLTAYGHFTSVLS*SPRAKV
Trigger: GACCTTCGCCCTGGGGGAGCAGCTGAGCACAGAGGT...GAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGGCCATTCCAGGACGATaGTGTCCACCAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GMAAGAGWRGKHGIATGLAIPGR*CPPEAG
Trigger: CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGC...CAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp TTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTGGGGATGGCAGCAGGAGCACTGGCAACAGGGCTaGAGGGATCTGAGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: LFWARHLPGPPPWGWQQEHWQQG*RDLSSD
Trigger: GTCGCTACTCAGATCCCTGCAGCCCTGTTGCCAGTG...CTCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp TTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTGGGGATGGCAGCAGGAGTCGGACGGCGATCTGTaGCCCTTCCAGCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LFWARHLPGPPPWGWQQESDGDL*PFQLLV
Trigger: AACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGA...CTCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGGAGAGGTTGTCACTaGCTTGCAGGATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: ESDGTRALLVSGQPAWLQGRGCH*LAGCPP
Trigger: TGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCC...TTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCAGGGTGGCCTCGGCCTaGCTAGAGGAGCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: PGTSTQLITPWPFQDDAVRVASA*LEERLR
Trigger: ACGGAGCCGCTCCTCTAGCCAGGCCGAGGCCACCCT...GACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCAAGGGTGGCCTCGGCCTaGCTAGAGGAGCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: VVERGSASYPQELVGQTARVASA*LEERLR
Trigger: ACGGAGCCGCTCCTCTAGCCAGGCCGAGGCCACCCT...TGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp CCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATCGTTGCTTGTGCTGCTaGGCCCCAGGGTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PLPGTSTQLITPWPFQDDRCLCC*APGWPR
Trigger: CCGAGGCCACCCTGGGGCCCAGCAGCACAAGCAACG...ATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAAGGAACATTAGGGGCTaGGTCGGCGAGGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PEPSSSQGSLPGFKVEITRNIRG*VGEAQA
Trigger: TGCTTGGGCCTCGCCGACCCAGCCCCTAATGTTCCT...TGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGTCGGACTGTTCCCTCTaGAGCAGGTGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GMAAGAGWRGKHGIATGLSDCSL*SRCHWL
Trigger: CAGCCAGTGGCACCTGCTCCAGAGGGAACAGTCCGA...CAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTCGGACTGTTCCCTCTaGAGCAGGTGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHASDCSL*SRCHWL
Trigger: CAGCCAGTGGCACCTGCTCCAGAGGGAACAGTCCGA...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGGAGGGGGCTGAGGGCTaGAGCAGAGGAGCATCGGAG +
Preference number: 4 (lower is better)
Translates to: VVSRMACPHGWRHAFPRKEGAEG*SRGASE
Trigger: CTCCGATGCTCCTCTGCTCCAGCCCTCAGCCCCCTC...CTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTGGCGGCAGTGGAGCTTaGGAGCTGCTTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ACSPGLRKLPPCLWQLVIGGSGA*ELLEEG
Trigger: CCCCTCCTCAAGCAGCTCCCAAGCTCCACTGCCGCC...AATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCTGGGACCACAGGAGCTaGGAAGGGAGGCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HSLPLPGTSTQLITPWPFWDHRS*EGRRQW
Trigger: CCACTGCCGCCTCCCTTCCCAGCTCCTGTGGTCCCA...GAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGGGGCAGGAACACTaGCTGGGACCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QLITPWPFQDDAVHQRQGWGQEH*LGPQEL
Trigger: CAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCCCCCA...GCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCAGGAGGAGCCCGCACTaGGGGCAGGAACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: HSLPLPGTSTQLITPWPFRRSPH*GQEHWL
Trigger: CAGCCAGTGTTCCTGCCCCCAGTGCGGGCTCCTCCT...GAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCCCCAACGCCAAGCCATaGTGCCCAGGGACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: GQAHNSSLRGHSRTMLSTPNAKP*CPGTAG
Trigger: GCCCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGG...GGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGTCGAGGGCATCCAGGTaGTGCAGCGCGCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: SLPLPGTSTQLITPWPFQSRASR*CSALLP
Trigger: GGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGA...CTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCTGGAAACTCAGTGGCTaGAAGAGCGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SCSPRAKVSLYRSRTFSFWKLSG*KSGLPG
Trigger: GCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCA...GAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGGACTGGAAACTCAGTaGCTGGAAGAGCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RALLVSGQPAWLQGGDHSGLETQ*LEERAA
Trigger: GGCAGCCCGCTCTTCCAGCCACTGAGTTTCCAGTCC...GCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTGGGGATGGCAGCAGGACACGTCAGGTCGTCCTaGGGGACACTCCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LILGQAPSWATSLGMAAGHVRSS*GTLLGK
Trigger: TTTGCCAAGGAGTGTCCCCCAGGACGACCTGACGTG...TCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp TGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGCACGTCAGGTCGTCCTaGGGGACACTCCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: WLAGEAWNCNRAAAPWAVHVRSS*GTLLGK
Trigger: TTTGCCAAGGAGTGTCCCCCAGGACGACCTGACGTG...CACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CGGGACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACGGTGATGGCTGCAGGTaGCTGGATGGGGCTAAATGG +
Preference number: 4 (lower is better)
Translates to: RDSSEVRGHSAPLTAYGHGDGCR*LDGAKW
Trigger: CCATTTAGCCCCATCCAGCCACCTGCAGCCATCACC...GTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGGCATGGAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTTTGGCGGGGGAAGCATaGAATTGCAACAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RAWRVTGPEPSSSQGSLPLAGEA*NCNRAA
Trigger: TGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAA...AGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ESDGTRALLVSGQPAWLQASSLF*ARHLPG
Trigger: CCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGC...TTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CGGGACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACCACCAGAGGCAGGGCTaGGGACTTTGCAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: RDSSEVRGHSAPLTAYGHHQRQG*GLCSMP
Trigger: TGGCATACTGCAAAGTCCCCAGCCCTGCCTCTGGTG...GTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCGCCTGTCCCCACGGCTaGAGGCACGCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTACPHG*RHAFPR
Trigger: TCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGC...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCGTGGCTGGGACAAGCTaGCGGGGGCCAAGCACTGTT +
Preference number: 4 (lower is better)
Translates to: DSSEVRGHSAPLTAYGHFVAGTS*RGPSTV
Trigger: AACAGTGCTTGGCCCCCGCCAGCTTGTCCCAGCCAC...GAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATCCACCTCCCTGGGGATaGCAGCAGGAGGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: DTACHCQGQAHNSSLRGHPPPWG*QQEAKP
Trigger: AGGCTTGGCCTCCTGCTGCCATCCCCAGGGAGGTGG...ATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580646.5
CDS-3UTR TCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTGCCTCTTCTAGAAGCTaGTCGAGGGCATCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAASSRS*SRASRW
Trigger: CCACCTGGATGCCCTCGATCAGCTTCTAGAAGAGGC...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACTCAGGGCATGGAGAGTaGCGGGACCAGAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPLPGTSTQLITPWPFQDSGHGE*RDQSPP
Trigger: AGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGA...GTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTCAGGGCATGGAGAGTaGCGGGACCAGAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPGRRSAYTEAAPSPSVDSGHGE*RDQSPP
Trigger: AGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGA...ATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGTTCCCGGGACAGCAGTaGAGTCAGGGGCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: HRTQPATARDKHTTHHSVFPGQQ*SQGPLR
Trigger: GCGGAGTGGCCCCTGACTTCACTGCTGTCCCGGGAA...CACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CGGGACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTGCATCTGTCAGGTGTaGGGATGTGGCTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: RDSSEVRGHSAPLTAYGHCICQV*GCGSCG
Trigger: CCCACAAGAGCCACATCCTCACACCTGACAGATGCA...GTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp AGGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAGGGCGTTGCTTGTGCTaGTGGGCCCCAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RLGVHVPGSHPAARVAGTGRCLC*WAPGWP
Trigger: AGGCCACCCTGGGGCCCAGCAGCACAAGCAACGCCC...TGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp ACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTGCCAGGAGAGGGCGTTaGTTGTGCTGCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TQPATARDKHTTHHSVAIARRGR*LCCWAP
Trigger: TGGGGCCCAGCAGCACAAGCAACGCCCTCTCCTGGC...AATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGGTGCAGCGCGCTGTTaGCCAACGCCAAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: LPLPGTSTQLITPWPFQDGAARC*PTPSHG
Trigger: ACCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACC...GTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACGGTGCAGCGCGCTGTTaGCCAACGCCAAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: GSGDSAQVWPDLITSRPNGAARC*PTPSHG
Trigger: ACCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACC...GTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATGGTGCAGCGCGCTGTTaGCCAACGCCAAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: DTACHCQGQAHNSSLRGHGAARC*PTPSHG
Trigger: ACCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACC...ATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCAGGGCATCCAGGTGGTaGAGCGCGCTGTTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: HSLPLPGTSTQLITPWPFRASRW*SALLPN
Trigger: GTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCT...GAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACCTCAACGCTGGAAGAGCGGGCTaGCGGGCCCCGTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QQSWDIQYSHLPRSTDLNAGRAG*RAPWRR
Trigger: CCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGC...GTTGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGACCTGGGTGATGGCTaGAGGTGGCTGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: LPLPGTSTQLITPWPFQDDLGDG*RWLDGA
Trigger: AGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTC...GTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TGGGACGAGGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTACCTCTGTGCTCAGCTaGTCCCCCAGGGCGAAGGTC +
Preference number: 4 (lower is better)
Translates to: WDEVVERGSASYPQELVGTSVLS*SPRAKV
Trigger: GACCTTCGCCCTGGGGGAGCAGCTGAGCACAGAGGT...ACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACCTCGTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR GCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGAATTGCAACAGGGCTaGAGCCCCTTGGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHELQQG*SPLGRA
Trigger: TGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTC...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCGAATTGCAACAGGGCTaGAGCCCCTTGGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTELQQG*SPLGRA
Trigger: TGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTC...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp CAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCGCCATTCCAGGACGATaGTGTCCACCAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QLITPWPFQDDAVHQRQGAIPGR*CPPEAG
Trigger: CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGC...GCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCGCCATTCCAGGACGATaGTGTCCACCAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTAIPGR*CPPEAG
Trigger: CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGC...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGAGCACCGTCAGGGCCTaGAGCGCCTCCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: HNSSLRGHSRTMLSTRGRSTVRA*SASHSC
Trigger: ACAGGAATGGGAGGCGCTCCAGGCCCTGACGGTGCT...CCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTTTTGGGACGAGGTGGTaGAGAGGGGATCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: SPPRLRAACLASRWRSQRFGTRW*RGDQRP
Trigger: AGGACGCTGATCCCCTCTCCACCACCTCGTCCCAAA...ACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACATTTGGGACGAGGTGGTaGAGAGGGGATCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: PEPSSSQGSLPGFKVEITFGTRW*RGDQRP
Trigger: AGGACGCTGATCCCCTCTCCACCACCTCGTCCCAAA...TGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGCGCTTGGTCACCTTCTaGATCCGTGCCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LITPWPFQDDAVHQRQGWRLVTF*IRASSS
Trigger: GGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCG...CCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCCGGAGGACAAACTGTTaGTCGTGTCCAGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: SWLAGEAWNCNRAAAPWARRTNC*SCPAPQ
Trigger: TTGCGGAGCTGGACACGACCAACAGTTTGTCCTCCG...GGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGGGTGGAGTAGGTGCTaGGGCCAACACGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: APPGRRSAYTEAAPSPSVGWSRC*GQHGGQ
Trigger: TTGTCCTCCGTGTTGGCCCCAGCACCTACTCCACCC...CACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGACCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTAGGGTGGCCTCGGCCTaGCTAGAGGAGCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: RPNISLTVPLSSWGTVEVRVASA*LEERLR
Trigger: ACGGAGCCGCTCCTCTAGCCAGGCCGAGGCCACCCT...AACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCACGTTGCTTGTGCTGCTaGGCCCCAGGGTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GQIPCPAKMSIGHSLPLPRCLCC*APGWPR
Trigger: CCGAGGCCACCCTGGGGCCCAGCAGCACAAGCAACG...TGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCAGGAACATTAGGGGCTaGGTCGGCGAGGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QLITPWPFQDDAVHQRQGRNIRG*VGEAQA
Trigger: TGCTTGGGCCTCGCCGACCCAGCCCCTAATGTTCCT...GCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGGAACATTAGGGGCTaGGTCGGCGAGGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLRNIRG*VGEAQA
Trigger: TGCTTGGGCCTCGCCGACCCAGCCCCTAATGTTCCT...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACTCGGACTGTTCCCTCTaGAGCAGGTGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHSDCSL*SRCHWL
Trigger: CAGCCAGTGGCACCTGCTCCAGAGGGAACAGTCCGA...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTCGGACTGTTCCCTCTaGAGCAGGTGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLPQGEGQLIPKPHLLLQSDCSL*SRCHWL
Trigger: CAGCCAGTGGCACCTGCTCCAGAGGGAACAGTCCGA...CTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTCGGACTGTTCCCTCTaGAGCAGGTGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTSDCSL*SRCHWL
Trigger: CAGCCAGTGGCACCTGCTCCAGAGGGAACAGTCCGA...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCGGCAGGAACACTGGCTaGGACCACAGGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCGRNTG*DHRSWE
Trigger: TTCCCAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCC...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGTGGGGGCAGGAACACTaGCTGGGACCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VVSRMACPHGWRHAFPRKWGQEH*LGPQEL
Trigger: CAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCCCCCA...CTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTAGGAGGAGCCCGCACTaGGGGCAGGAACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFRRSPH*GQEHWL
Trigger: CAGCCAGTGTTCCTGCCCCCAGTGCGGGCTCCTCCT...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGTGCGGGCTCAACTTTTaGGGCCAAGGCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: VVSRMACPHGWRHAFPRKCGLNF*GQGWGH
Trigger: GTGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCA...CTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGGGACTGGAAACTCAGTaGCTGGAAGAGCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLPQGEGQLIPKPHLLLQGLETQ*LEERAA
Trigger: GGCAGCCCGCTCTTCCAGCCACTGAGTTTCCAGTCC...CTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTGGACTGGAAACTCAGTaGCTGGAAGAGCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLGLETQ*LEERAA
Trigger: GGCAGCCCGCTCTTCCAGCCACTGAGTTTCCAGTCC...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGGGACTGGAAACTCAGTaGCTGGAAGAGCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLGLETQ*LEERAA
Trigger: GGCAGCCCGCTCTTCCAGCCACTGAGTTTCCAGTCC...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTGGGCTGCCCTGGGACTaGAAACTCAGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLGLPWD*KLSGWK
Trigger: CTTCCAGCCACTGAGTTTCCAGTCCCAGGGCAGCCC...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGGGCTGCCCTGGGACTaGAAACTCAGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: APPGRRSAYTEAAPSPSVGLPWD*KLSGWK
Trigger: CTTCCAGCCACTGAGTTTCCAGTCCCAGGGCAGCCC...CACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGGGGCTGCCCTGGGACTaGAAACTCAGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLGLPWD*KLSGWK
Trigger: CTTCCAGCCACTGAGTTTCCAGTCCCAGGGCAGCCC...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGGCACGTGGATGCTaGCCAGGGAGAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GQIPCPAKMSIGHSLPLPGARGC*PGRAQA
Trigger: GGCCTGAGCTCTCCCTGGCCAGCATCCACGTGCCCC...TGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CGGGACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: RDSSEVRGHSAPLTAYGHMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...GTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: AAPPGRRSAYTEAAPSPSASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...TGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QLITPWPFQDDAVHQRQGASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...GCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QEVVSRMACPHGWRHAFPASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...GGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACTCCACAGGAGGGAACTaGTCCACCTCGCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHSTGGN*STSPTS
Trigger: AGAGGTGGGCGAGGTGGACCAGTTCCCTCCTGTGGA...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTCCACAGGAGGGAACTaGTCCACCTCGCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: LLPQGEGQLIPKPHLLLQSTGGN*STSPTS
Trigger: AGAGGTGGGCGAGGTGGACCAGTTCCCTCCTGTGGA...CTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGTCAGGGCAGCCTGCCTaGCTTCAAGGTGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: LITPWPFQDDAVHQRQGWSGQPA*LQGGDH
Trigger: GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGA...CCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCAGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: DQSPPRLRAACLASRWRSASSLF*ARHLPG
Trigger: CCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGC...TGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACGCCTGTCCCCACGGCTaGAGGCACGCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GSGDSAQVWPDLITSRPNACPHG*RHAFPR
Trigger: TCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGC...GTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATGCCTGTCCCCACGGCTaGAGGCACGCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: DTACHCQGQAHNSSLRGHACPHG*RHAFPR
Trigger: TCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGC...ATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGTGGCTGGGACAAGCTaGCGGGGGCCAAGCACTGTT +
Preference number: 4 (lower is better)
Translates to: SLPLPGTSTQLITPWPFQVAGTS*RGPSTV
Trigger: AACAGTGCTTGGCCCCCGCCAGCTTGTCCCAGCCAC...CTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCATCCAGCAGCTAGAGTaGCTGGGACAAGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTIQQLE*LGQAGG
Trigger: CCCGCCAGCTTGTCCCAGCCACTCTAGCTGCTGGAT...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGAGGTACGTCAGGGCCTaGAGCGCCTCCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: ACHCQGQAHNSSLRGHSRRYVRA*SASHSC
Trigger: ACAGGAATGGGAGGCGCTCCAGGCCCTGACGTACCT...CCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538886.5
CDS-3UTR CCA 90 bp TGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACAGCAGGAGGCCAAGCCTaGGGGTCCATGTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: CPAKMSIGHSLPLPGTSTAGGQA*GSMFPG
Trigger: TCCCGGGAACATGGACCCCCAGGCTTGGCCTCCTGC...TGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580646.5
CDS-3UTR TCA 90 bp GATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTGCTCCGCAAGGTCGATaGGCGTGCCTTGGTTACTGC +
Preference number: 4 (lower is better)
Translates to: DVRLLSLFTWAPQASPVSAPQGR*ACLGYC
Trigger: GCAGTAACCAAGGCACGCTCATCGACCTTGCGGAGC...AGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp TTTCCTTCCGAGTCAGGCAGGGTTAAGGTAGCCACCTCGCCATTGATGACCTGCTCCCCGGCCTGGGGCTaGAGAAGTCCAGGTCGGACT +
Preference number: 4 (lower is better)
Translates to: FPSESGRVKVATSPLMTCSPAWG*RSPGRT
Trigger: AGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGA...GCAGGTCATCAATGGCGAGGTGGCTACCTTAACCCTGCCTGACTCGGAAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCGCAGCACGATGCTCTTaGCAGGTAAGGGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: QEVVSRMACPHGWRHAFPAARCS*QVREPC
Trigger: ACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGC...GGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCGCAGCACGATGCTCTTaGCAGGTAAGGGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCAARCS*QVREPC
Trigger: ACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGC...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCTCAGGGCATGGAGAGTaGCGGGACCAGAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: AKMSIGHSLPLPGTSTQLSGHGE*RDQSPP
Trigger: AGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGA...GAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGCCACTCCGCACCCCTaGCAGCATATGGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LPLPGTSTQLITPWPFQDATPHP*QHMATS
Trigger: TGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGC...GTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCATTCCCGGGACAGCAGTaGAGTCAGGGGCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: DKHTTHHSVAIPGRCCPPFPGQQ*SQGPLR
Trigger: GCGGAGTGGCCCCTGACTTCACTGCTGTCCCGGGAA...TGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGAGATGTCCGATTGCTaGGCTTGTTCACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PEPSSSQGSLPGFKVEITEMSDC*ACSPGL
Trigger: GAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTC...TGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCAGAGATGTCCGATTGCTaGGCTTGTTCACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: DQSPPRLRAACLASRWRSEMSDC*ACSPGL
Trigger: GAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTC...TGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGAGATGTCCGATTGCTaGGCTTGTTCACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RALLVSGQPAWLQGGDHSEMSDC*ACSPGL
Trigger: GAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTC...GCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTGGAGGGTGGAGTAGGTaGTGGGGCCAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFGGWSR*WGQHGG
Trigger: TCCTCCGTGTTGGCCCCAGCACCTACTCCACCCTCC...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCGGAGGGTGGAGTAGGTaGTGGGGCCAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: AKMSIGHSLPLPGTSTQLGGWSR*WGQHGG
Trigger: TCCTCCGTGTTGGCCCCAGCACCTACTCCACCCTCC...GAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGGAGGGTGGAGTAGGTaGTGGGGCCAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: HRTQPATARDKHTTHHSVGGWSR*WGQHGG
Trigger: TCCTCCGTGTTGGCCCCAGCACCTACTCCACCCTCC...CACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCAACGCCAAGCCATGGTaGCCAGGGACTGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PGTSTQLITPWPFQDDAVNAKPW*PGTAGS
Trigger: TGAGCCCGCAGTCCCTGGGCACCATGGCTTGGCGTT...GACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCGGTGCAGCGCGCTGTTaGCCAACGCCAAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: PGTSTQLITPWPFQDDAVGAARC*PTPSHG
Trigger: ACCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACC...GACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCGACCTGGGTGATGGCTaGAGGTGGCTGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: QGEGQLIPKPHLLLQWIGDLGDG*RWLDGA
Trigger: AGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTC...GCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGGCCATTCCAGGACGATaGTGTCCACCAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VVSRMACPHGWRHAFPRKAIPGR*CPPEAG
Trigger: CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGC...CTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGGGCATGGAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTTCCAGTACAGCCATTTaGCACGAAGCACTGACCTCA +
Preference number: 4 (lower is better)
Translates to: RAWRVTGPEPSSSQGSLPSSTAI*HEALTS
Trigger: TGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGA...AGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCTGAGTAGCGACAGCTaGCAGGCAGAGGGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GEGQLIPKPHLLLQWIGQLSSDS*QAEGRP
Trigger: GGGCCTTCCCTCTGCCTGGCAGCTGTCGCTACTCAG...CTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR GCA 90 bp AGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCCAACTCAGGGTTCTTTaGCCACCCCAACAGTCACAC +
Preference number: 4 (lower is better)
Translates to: SWLAGEAWNCNRAAAPWAQLRVL*PPQQSH
Trigger: GTGTGACTGTTGGGGTGGGCAAAGAACCCTGAGTTG...GGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS-3UTR CCA 90 bp GAAAGGGGACATGGCAGCACGTGCACTCAGGCTGTGGTTGCCTTGTCACCCCTCTTTGGGACGAGGTGGTaGAGAGGGGATCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: ERGHGSTCTQAVVALSPLFGTRW*RGDQRP
Trigger: AGGACGCTGATCCCCTCTCCACCACCTCGTCCCAAA...GAGGGGTGACAAGGCAACCACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR CCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGCGCTTGGTCACCTTCTaGATCCGTGCCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLRLVTF*IRASSS
Trigger: GGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCG...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGGGAGAGGTTGTCACTaGCTTGCAGGATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHGRGCH*LAGCPP
Trigger: TGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCC...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTCGGAGGACAAACTGTTaGTCGTGTCCAGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHARRTNC*SCPAPQ
Trigger: TTGCGGAGCTGGACACGACCAACAGTTTGTCCTCCG...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGAGGGTGGAGTAGGTGCTaGGGCCAACACGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRGWSRC*GQHGGQ
Trigger: TTGTCCTCCGTGTTGGCCCCAGCACCTACTCCACCC...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAAGCACTGTTGAAGCAATAGGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATAGGGTGGCCTCGGCCTaGCTAGAGGAGCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: PSTVEAIGSGDSAQVWPDRVASA*LEERLR
Trigger: ACGGAGCCGCTCCTCTAGCCAGGCCGAGGCCACCCT...ATCGGGCCACACTTGAGCTGAGTCACCAGACCCTATTGCTTCAACAGTGCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTCGTTGCTTGTGCTGCTaGGCCCCAGGGTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQARCLCC*APGWPR
Trigger: CCGAGGCCACCCTGGGGCCCAGCAGCACAAGCAACG...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGGAGCAGGTGCCACTaGCTGTTCCCAGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTWSRCH*LFPADS
Trigger: AGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCA...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCTGGAGCAGGTGCCACTaGCTGTTCCCAGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: QEVVSRMACPHGWRHAFPWSRCH*LFPADS
Trigger: AGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCA...GGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGATGGGACCACAGGAGCTaGGAAGGGAGGCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QCPSVAGEQLRFLGSTLGWDHRS*EGRRQW
Trigger: CCACTGCCGCCTCCCTTCCCAGCTCCTGTGGTCCCA...TCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAACATGACCTGGGTTGGGACCACAGGAGCTaGGAAGGGAGGCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: IPKPHLLLQWIGQQHDLGWDHRS*EGRRQW
Trigger: CCACTGCCGCCTCCCTTCCCAGCTCCTGTGGTCCCA...ACCCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATGCTGGGACCACAGGAGCTaGGAAGGGAGGCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ERGSASYPQELVGQTALCWDHRS*EGRRQW
Trigger: CCACTGCCGCCTCCCTTCCCAGCTCCTGTGGTCCCA...GCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp TCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACATCTGGGACCACAGGAGCTaGGAAGGGAGGCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SGDSAQVWPDLITSRPNIWDHRS*EGRRQW
Trigger: CCACTGCCGCCTCCCTTCCCAGCTCCTGTGGTCCCA...GATGTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTGGCAGGAACACTGGCTaGGACCACAGGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: DVRLLSLFTWAPQASPVSGRNTG*DHRSWE
Trigger: TTCCCAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCC...AGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCTGCGGGCTCAACTTTTaGGGCCAAGGCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PGTSTQLITPWPFQDDAVCGLNF*GQGWGH
Trigger: GTGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCA...GACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTTGCGGGCTCAACTTTTaGGGCCAAGGCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFCGLNF*GQGWGH
Trigger: GTGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCA...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTGCGGGCTCAACTTTTaGGGCCAAGGCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: CQGQAHNSSLRGHSRTMLCGLNF*GQGWGH
Trigger: GTGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCA...CAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACATGGAAACTCAGTGGCTaGAAGAGCGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: CPAKMSIGHSLPLPGTSTWKLSG*KSGLPG
Trigger: GCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCA...TGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGAGGACTGGAAACTCAGTaGCTGGAAGAGCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRGLETQ*LEERAA
Trigger: GGCAGCCCGCTCTTCCAGCCACTGAGTTTCCAGTCC...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCTTGGGCCGTGCATCTGTCAGGTGTGAGGATGTGGCTCTTGTGGGGAATGACCGGACTGGAAACTCAGTaGCTGGAAGAGCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PWAVHLSGVRMWLLWGMTGLETQ*LEERAA
Trigger: GGCAGCCCGCTCTTCCAGCCACTGAGTTTCCAGTCC...GGTCATTCCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGGGCTGCCCTGGGACTaGAAACTCAGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLPLPGTSTQLITPWPFQGLPWD*KLSGWK
Trigger: CTTCCAGCCACTGAGTTTCCAGTCCCAGGGCAGCCC...CTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGCTGGGGGACACTCCTTaGCAAAGTGGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: LITPWPFQDDAVHQRQGWLGDTP*QSGRGC
Trigger: GCATCCTCTTCCACTTTGCCAAGGAGTGTCCCCCAG...CCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTCTGGGGGACACTCCTTaGCAAAGTGGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHALGDTP*QSGRGC
Trigger: GCATCCTCTTCCACTTTGCCAAGGAGTGTCCCCCAG...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACCACGTCAGGTCGTCCTaGGGGACACTCCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHHVRSS*GTLLGK
Trigger: TTTGCCAAGGAGTGTCCCCCAGGACGACCTGACGTG...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTCACGTCAGGTCGTCCTaGGGGACACTCCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLHVRSS*GTLLGK
Trigger: TTTGCCAAGGAGTGTCCCCCAGGACGACCTGACGTG...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGACTGGATGGGGCTAAATaGAGAGAGTTCTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: DGTRALLVSGQPAWLQGGLDGAK*REFCPR
Trigger: TCTGGGACAGAACTCTCTCCATTTAGCCCCATCCAG...TCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCGGTGATGGCTGCAGGTaGCTGGATGGGGCTAAATGG +
Preference number: 4 (lower is better)
Translates to: QEVVSRMACPHGWRHAFPGDGCR*LDGAKW
Trigger: CCATTTAGCCCCATCCAGCCACCTGCAGCCATCACC...GGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGAGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QPATARDKHTTHHSVAIPASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...TGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PPGRRSAYTEAAPSPSVDASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...ATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp ACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGTCCACAGGAGGGAACTaGTCCACCTCGCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: TTHHSVAIPGRCCPPEAGSTGGN*STSPTS
Trigger: AGAGGTGGGCGAGGTGGACCAGTTCCCTCCTGTGGA...CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTACTGTTGTCAGGGCATaGAGAGTGACGGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: SPPRLRAACLASRWRSQRTVVRA*RVTGPE
Trigger: CTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGT...ACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGCACCTACGCCAAGCCTaGGGGTCCATGTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: TQLITPWPFQDDAVHQRQHLRQA*GSMFPG
Trigger: TCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTG...CTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGAGGGCTGCAGCCCCTTaGGCCGTGCATCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: HRTQPATARDKHTTHHSVRAAAP*AVHLSG
Trigger: ACCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCT...CACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCGCCTGTCCCCACGGCTaGAGGCACGCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QGEGQLIPKPHLLLQWIGACPHG*RHAFPR
Trigger: TCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGC...GCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACATCCAGCAGCTAGAGTaGCTGGGACAAGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LPLPGTSTQLITPWPFQDIQQLE*LGQAGG
Trigger: CCCGCCAGCTTGTCCCAGCCACTCTAGCTGCTGGAT...GTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACCTGAGCTTGTTCACCTaGGCTCCGCAAGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LPLPGTSTQLITPWPFQDLSLFT*APQASP
Trigger: GGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAG...GTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAACAAGGGCAGCAGAGCTaGGATATCCAGTACAGCCAT +
Preference number: 4 (lower is better)
Translates to: ESDGTRALLVSGQPAWLQQGQQS*DIQYSH
Trigger: ATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG...TTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGCAGAGGGAAGGCCCGTaGCACCCAGTGTATCACCCT +
Preference number: 4 (lower is better)
Translates to: HNSSLRGHSRTMLSTRGRQREGP*HPVYHP
Trigger: AGGGTGATACACTGGGTGCCACGGGCCTTCCCTCTG...CCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR TCA 90 bp GATGAGAGGGGAGGTAGTGGGTTTCACCAAGCCCGAGGTCACTTTGGCCTCTTCGCTCCGCAAGGTCGATaGGCGTGCCTTGGTTACTGC +
Preference number: 4 (lower is better)
Translates to: DERGGSGFHQARGHFGLFAPQGR*ACLGYC
Trigger: GCAGTAACCAAGGCACGCTCATCGACCTTGCGGAGC...GAAGAGGCCAAAGTGACCTCGGGCTTGGTGAAACCCACTACCTCCCCTCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp TCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGGCTCCGCAAGGTCGATaGGCGTGCCTTGGTTACTGC +
Preference number: 4 (lower is better)
Translates to: SMSCQDVHRTQPATARDKAPQGR*ACLGYC
Trigger: GCAGTAACCAAGGCACGCTCATCGACCTTGCGGAGC...CTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGAGCCTCTTCTAGAAGCTaGTCGAGGGCATCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRASSRS*SRASRW
Trigger: CCACCTGGATGCCCTCGATCAGCTTCTAGAAGAGGC...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGATCAGGGCATGGAGAGTaGCGGGACCAGAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QAHNSSLRGHSRTMLSTRSGHGE*RDQSPP
Trigger: AGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGA...TCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CTTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTGGGGATGGCAGCAGGAGTGGGGAATGACCCATaGCAGTCTCTCTTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: LILGQAPSWATSLGMAAGVGNDP*QSLFRD
Trigger: GTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCAC...TCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCGGGTCAGGTGACAAGTaGCATCAATGGGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTGSGDK*HQWVKA
Trigger: CGCCTTCACCCATTGATGTCACTTGTCACCTGACCC...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS-3UTR GCA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTACAGTTCTTCATGCATaGCTCCAGCACCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLTVLHA*LQHRQG
Trigger: GCCCTGACGGTGCTGGAGGCATGCATGAAGAACTGT...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAATTGGTGGGTCAGACTaGACTATGCCCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ESDGTRALLVSGQPAWLQIGGSD*TMPCLF
Trigger: GAAGAGACAGGGCATAGTGCAGTCTGACCCACCAAT...TTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTCACCTTCTGGATCCGTaGCTCGTCTTCCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAHLLDP*LVFLHH
Trigger: ATGGTGAAGGAAGACGAGGCACGGATCCAGAAGGTG...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACCTCAACGCCAGGAGAGGGCGTTaGTTGTGCTGCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: QQSWDIQYSHLPRSTDLNARRGR*LCCWAP
Trigger: TGGGGCCCAGCAGCACAAGCAACGCCCTCTCCTGGC...GTTGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGGCCAGGAGAGGGCGTTaGTTGTGCTGCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLARRGR*LCCWAP
Trigger: TGGGGCCCAGCAGCACAAGCAACGCCCTCTCCTGGC...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTAACGCCAAGCCATGGTaGCCAGGGACTGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PNISLTVPLSSWGTVEVSNAKPW*PGTAGS
Trigger: TGAGCCCGCAGTCCCTGGGCACCATGGCTTGGCGTT...AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp ACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGAACGCCAAGCCATGGTaGCCAGGGACTGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: TVPLSSWGTVEVSGQHIRNAKPW*PGTAGS
Trigger: TGAGCCCGCAGTCCCTGGGCACCATGGCTTGGCGTT...CCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTGGCTGGAAGAGCGGGCTaGCGGGCCCCGTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RVLSQKVAATSLSLTWALAGRAG*RAPWRR
Trigger: CCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGC...CAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGTTGGGCACTGCAGCCTaGAGCACGATGCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLLGTAA*STMLLT
Trigger: TGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAA...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGACAGCAGTGTTGGGCACTGCAGCCTaGAGCACGATGCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: RKQTPTPSLGVHVPGTAVLGTAA*STMLLT
Trigger: TGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAA...CACTGCTGTCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGACCTGGGTGATGGCTaGAGGTGGCTGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLEYMSQDHIQQLEWLGQDLGDG*RWLDGA
Trigger: AGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTC...TTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAAGGGCAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACACCTCTGTGCTCAGCTaGTCCCCCAGGGCGAAGGTC +
Preference number: 4 (lower is better)
Translates to: QGQQSWDIQYSHLPRSTDTSVLS*SPRAKV
Trigger: GACCTTCGCCCTGGGGGAGCAGCTGAGCACAGAGGT...GTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGGAATTGCAACAGGGCTaGAGCCCCTTGGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: CQGQAHNSSLRGHSRTMLELQQG*SPLGRA
Trigger: TGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTC...CAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCGCCATTCCAGGACGATaGTGTCCACCAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AKMSIGHSLPLPGTSTQLAIPGR*CPPEAG
Trigger: CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGC...GAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGACACAGCCTGCCACTaGCAGGGACAAGCACACAAC +
Preference number: 4 (lower is better)
Translates to: HNSSLRGHSRTMLSTRGRDTACH*QGQAHN
Trigger: GTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC...CCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGACAGCAGTGAGACATTCCCAGGGCTaGAGCAGCCAGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RKQTPTPSLGVHVPGTAVRHSQG*SSQSLE
Trigger: TTCCAGAGACTGGCTGCTGCAGCCCTGGGAATGTCT...CACTGCTGTCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGCATCCAGTACAGCCATTTaGCACGAAGCACTGACCTCA +
Preference number: 4 (lower is better)
Translates to: VGGGSMELQQGCSPLGRASSTAI*HEALTS
Trigger: TGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGA...TGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGTATTCCCAGTCCTCCTaGCGGTTGGAAGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: LITPWPFQDDAVHQRQGWYSQSS*RLEGLV
Trigger: CACCAATCCTTCCAACCGCCAGGAGGACTGGGAATA...CCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGTCAGACTGCACTATGCCTGAAAGGGGACATGGCAGCACGTGCACTCAGGCTGTCGGACGGCGATCTGTaGCCCTTCCAGCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GQTALCLKGDMAARALRLSDGDL*PFQLLV
Trigger: AACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGA...CAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR CCA 90 bp CCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATCGCTTGGTCACCTTCTaGATCCGTGCCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PPGRRSAYTEAAPSPSVDRLVTF*IRASSS
Trigger: GGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCG...ATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp ACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCCGCTTGGTCACCTTCTaGATCCGTGCCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TACHCQGQAHNSSLRGHSRLVTF*IRASSS
Trigger: GGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCG...GGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCCGGAGGACAAACTGTTaGTCGTGTCCAGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTRRTNC*SCPAPQ
Trigger: TTGCGGAGCTGGACACGACCAACAGTTTGTCCTCCG...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGTGGAGCAGGTGCCACTaGCTGTTCCCAGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: VVSRMACPHGWRHAFPRKWSRCH*LFPADS
Trigger: AGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCA...CTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GATGAGAGGGGAGGTAGTGGGTTTCACCAAGCCCGAGGTCACTTTGGCCTCTTCTCGGACTGTTCCCTCTaGAGCAGGTGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: DERGGSGFHQARGHFGLFSDCSL*SRCHWL
Trigger: CAGCCAGTGGCACCTGCTCCAGAGGGAACAGTCCGA...GAAGAGGCCAAAGTGACCTCGGGCTTGGTGAAACCCACTACCTCCCCTCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CCAAGCACTGTTGAAGCAATAGGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATGAGGGGGCTGAGGGCTaGAGCAGAGGAGCATCGGAG +
Preference number: 4 (lower is better)
Translates to: PSTVEAIGSGDSAQVWPDEGAEG*SRGASE
Trigger: CTCCGATGCTCCTCTGCTCCAGCCCTCAGCCCCCTC...ATCGGGCCACACTTGAGCTGAGTCACCAGACCCTATTGCTTCAACAGTGCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGGAGGGGGCTGAGGGCTaGAGCAGAGGAGCATCGGAG +
Preference number: 4 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLEGAEG*SRGASE
Trigger: CTCCGATGCTCCTCTGCTCCAGCCCTCAGCCCCCTC...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGGCGGCAGTGGAGCTTaGGAGCTGCTTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELGGSGA*ELLEEG
Trigger: CCCCTCCTCAAGCAGCTCCCAAGCTCCACTGCCGCC...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCGGCAGGAACACTGGCTaGGACCACAGGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: AKMSIGHSLPLPGTSTQLGRNTG*DHRSWE
Trigger: TTCCCAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCC...GAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGTGGGGGCAGGAACACTaGCTGGGACCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TVPLSSWGTVEVSGQHIRWGQEH*LGPQEL
Trigger: CAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCCCCCA...CCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTTGGGGCCAAGGCTaGGGCCACTCCAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAFWGQG*GHSSRK
Trigger: TTTTCTACTGGAGTGGCCCCAGCCTTGGCCCCAAAA...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCTGCGGGCTCAACTTTTaGGGCCAAGGCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: FPQRCPIAELVHLGSASFCGLNF*GQGWGH
Trigger: GTGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCA...GAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCATTTCCACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTCCCCAACGCCAAGCCATaGTGCCCAGGGACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PFPHSNSTDIPRAAAASLPNAKP*CPGTAG
Trigger: GCCCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGG...GAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTGGAAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCACCTCCCTGGGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGAGCCCGAGGTCACTTTaGCCTCTTCTAGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: PPPWGWQQELVGGGSMELSPRSL*PLLEAD
Trigger: ATCAGCTTCTAGAAGAGGCCAAAGTGACCTCGGGCT...CAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCCCAGGGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACATGGAAACTCAGTGGCTaGAAGAGCGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RLGVHVPGSHPAARVAGTWKLSG*KSGLPG
Trigger: GCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCA...TGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGTGGAAACTCAGTGGCTaGAAGAGCGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: TVPLSSWGTVEVSGQHIRWKLSG*KSGLPG
Trigger: GCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCA...CCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTGGGCTGCCCTGGGACTaGAAACTCAGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TQPATARDKHTTHHSVAIGLPWD*KLSGWK
Trigger: CTTCCAGCCACTGAGTTTCCAGTCCCAGGGCAGCCC...AATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTGGGGCACGTGGATGCTaGCCAGGGAGAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVGARGC*PGRAQA
Trigger: GGCCTGAGCTCTCCCTGGCCAGCATCCACGTGCCCC...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTAAAGACAGCGAGGGGCAGGGAAGGGATATGACCTCTTCCCATAGTAAGGAAGGGGCACGTGGATGCTaGCCAGGGAGAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: AKDSEGQGRDMTSSHSKEGARGC*PGRAQA
Trigger: GGCCTGAGCTCTCCCTGGCCAGCATCCACGTGCCCC...TTCCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCCCCTCGCTGTCTTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACCTGGGGGACACTCCTTaGCAAAGTGGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHLGDTP*QSGRGC
Trigger: GCATCCTCTTCCACTTTGCCAAGGAGTGTCCCCCAG...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGACACGTCAGGTCGTCCTaGGGGACACTCCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRHVRSS*GTLLGK
Trigger: TTTGCCAAGGAGTGTCCCCCAGGACGACCTGACGTG...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: SCSPRAKVSLYRSRTFSFMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...GAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATGGTGATGGCTGCAGGTaGCTGGATGGGGCTAAATGG +
Preference number: 4 (lower is better)
Translates to: PPGRRSAYTEAAPSPSVDGDGCR*LDGAKW
Trigger: CCATTTAGCCCCATCCAGCCACCTGCAGCCATCACC...ATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGAGGTGATGGCTGCAGGTaGCTGGATGGGGCTAAATGG +
Preference number: 4 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRGDGCR*LDGAKW
Trigger: CCATTTAGCCCCATCCAGCCACCTGCAGCCATCACC...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGTCCACAGGAGGGAACTaGTCCACCTCGCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: TQLITPWPFQDDAVHQRQSTGGN*STSPTS
Trigger: AGAGGTGGGCGAGGTGGACCAGTTCCCTCCTGTGGA...CTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCCTCTGGGGTCATAGGTTCCGATCACAGCGTCCTCTaGGGTCATAGGTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SLPGFKVEITASSGVIGSDHSVL*GHRFPH
Trigger: GTGGGGGAACCTATGACCCCAGAGGACGCTGTGATC...GGAACCTATGACCCCAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATCACAGCGTCCTCTaGGGTCATAGGTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LPLPGTSTQLITPWPFQDDHSVL*GHRFPH
Trigger: GTGGGGGAACCTATGACCCCAGAGGACGCTGTGATC...GTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGCCTGGCTTCAAGGTaGAGATCACAGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LLPQGEGQLIPKPHLLLQCLASR*RSQRPL
Trigger: CAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCA...CTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACTCAGGGCAGCCTGCCTaGCTTCAAGGTGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: GSGDSAQVWPDLITSRPNSGQPA*LQGGDH
Trigger: GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGA...GTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGACACCTACGCCAAGCCTaGGGGTCCATGTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: QAHNSSLRGHSRTMLSTRHLRQA*GSMFPG
Trigger: TCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTG...TCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp TGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGAGGATGTGGCTCTTGTaGGGAATGACCCATGACAGT +
Preference number: 4 (lower is better)
Translates to: WLAGEAWNCNRAAAPWAVRMWLL*GMTHDS
Trigger: ACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT...CACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGCTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCTTGGCGGGGGAAGCATaGAATTGCAACAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SCSPRAKVSLYRSRTFSFLAGEA*NCNRAA
Trigger: TGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAA...GAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCAGCAGGAGCTGGTTaGCGGGGGAAGCATGGAATT +
Preference number: 4 (lower is better)
Translates to: HNSSLRGHSRTMLSTRGRAAGAG*RGKHGI
Trigger: AATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGC...CCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGATGGCAGCAGGAGCTaGTTGGCGGGGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: PNISLTVPLSSWGTVEVSDGSRS*LAGEAW
Trigger: CCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATC...AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HNSSLRGHSRTMLSTRGRASSLF*ARHLPG
Trigger: CCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGC...CCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATCACCAGAGGCAGGGCTaGGGACTTTGCAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: DTACHCQGQAHNSSLRGHHQRQG*GLCSMP
Trigger: TGGCATACTGCAAAGTCCCCAGCCCTGCCTCTGGTG...ATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCACCAGAGGCAGGGCTaGGGACTTTGCAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: TTHHSVAIPGRCCPPEAGHQRQG*GLCSMP
Trigger: TGGCATACTGCAAAGTCCCCAGCCCTGCCTCTGGTG...CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACACAACTCATCACTCCGTaGCCATTCCAGGACGATGCT +
Preference number: 4 (lower is better)
Translates to: PEPSSSQGSLPGFKVEITQLITP*PFQDDA
Trigger: AGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG...TGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SWLAGEAWNCNRAAAPWALPIPS*ACHEAK
Trigger: TTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAG...GGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGTGCCCCTCAGTAGCTaGGGAACAGTTGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PEPSSSQGSLPGFKVEITVPLSS*GTVEVS
Trigger: AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCAC...TGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTTTGTGGCTGGGACAAGCTaGCGGGGGCCAAGCACTGTT +
Preference number: 4 (lower is better)
Translates to: LFTWAPQASPVSMAAGDFVAGTS*RGPSTV
Trigger: AACAGTGCTTGGCCCCCGCCAGCTTGTCCCAGCCAC...AAAATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCAAGGGCAGCAGAGCTaGGATATCCAGTACAGCCAT +
Preference number: 4 (lower is better)
Translates to: SPPRLRAACLASRWRSQRQGQQS*DIQYSH
Trigger: ATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG...ACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAGGTACTGTCAGATTTGGGCTGAGGGCGCTTCAGAAAAAGCTGCCGGTCCCTAGCTGCCGGTCCCTGTaGCCTGTTTGGTCATCCCGT +
Preference number: 4 (lower is better)
Translates to: PGTVRFGLRALQKKLPVPSCRSL*PVWSSR
Trigger: ACGGGATGACCAAACAGGCCACAGGGACCGGCAGCT...AGGGACCGGCAGCTTTTTCTGAAGCGCCCTCAGCCCAAATCTGACAGTACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS-3UTR TCA 90 bp ACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACCCTTGGTTACTGCACTaGCTGTTTCCTTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: TRALLVSGQPAWLQGGDHPWLLH*LFPSES
Trigger: TGACTCGGAAGGAAACAGTCAGTGCAGTAACCAAGG...GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp ACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGGCTCCGCAAGGTCGATaGGCGTGCCTTGGTTACTGC +
Preference number: 4 (lower is better)
Translates to: TVPLSSWGTVEVSGQHIRAPQGR*ACLGYC
Trigger: GCAGTAACCAAGGCACGCTCATCGACCTTGCGGAGC...CCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCGCCTCTTCTAGAAGCTaGTCGAGGGCATCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AKMSIGHSLPLPGTSTQLASSRS*SRASRW
Trigger: CCACCTGGATGCCCTCGATCAGCTTCTAGAAGAGGC...GAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCGCAGCACGATGCTCTTaGCAGGTAAGGGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: AKMSIGHSLPLPGTSTQLAARCS*QVREPC
Trigger: ACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGC...GAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGGCAGCACGATGCTCTTaGCAGGTAAGGGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GEGQLIPKPHLLLQWIGQAARCS*QVREPC
Trigger: ACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGC...CTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp ACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTGCAGCACGATGCTCTTaGCAGGTAAGGGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: TQPATARDKHTTHHSVAIAARCS*QVREPC
Trigger: ACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGC...AATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CCAAGCACTGTTGAAGCAATAGGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATTCAGGGCATGGAGAGTaGCGGGACCAGAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSTVEAIGSGDSAQVWPDSGHGE*RDQSPP
Trigger: AGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGA...ATCGGGCCACACTTGAGCTGAGTCACCAGACCCTATTGCTTCAACAGTGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGCCACTCCGCACCCCTaGCAGCATATGGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: QAHNSSLRGHSRTMLSTRATPHP*QHMATS
Trigger: TGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGC...TCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGACCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTGCCACTCCGCACCCCTaGCAGCATATGGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: RPNISLTVPLSSWGTVEVATPHP*QHMATS
Trigger: TGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGC...AACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACCCCCAGTGGCTTCAGTaGATGCCAGTAGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LPLPGTSTQLITPWPFQDPQWLQ*MPVEGS
Trigger: GCTTCCTTCTACTGGCATTCACTGAAGCCACTGGGG...GTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCTGCATCTGTCAGGTGTaGGGATGTGGCTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: HSLPLPGTSTQLITPWPFCICQV*GCGSCG
Trigger: CCCACAAGAGCCACATCCTCACACCTGACAGATGCA...GAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATCCACATGCCATCTGGTaGGAGGAGAGGGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PLPGTSTQLITPWPFQDDPHAIW*EEREAK
Trigger: TTTGGCCTCCCTCTCCTCTCACCAGATGGCATGTGG...ATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCGACCCAACATCTCGCTaGCAGTGCCCCTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: GQAHNSSLRGHSRTMLSTDPTSR*QCPSVA
Trigger: AGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTC...GGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGAGCAATAGGGTCTGGTaGCTCAGCTCAAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: HNSSLRGHSRTMLSTRGRSNRVW*LSSSVA
Trigger: GGCCACACTTGAGCTGAGTCACCAGACCCTATTGCT...CCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCAGACTGCACTATGCCTaGAAGGGGACATGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GGGEGISVLSTGIGGSDCRLHYA*KGTWQH
Trigger: GTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCT...GCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR GCA 90 bp CCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGGCGTCTTTGATCTTTaGTTCTTCTGGCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PEPSSSQGSLPGFKVEITGVFDL*FFWQGH
Trigger: ATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCC...TGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTATTGGTGGGTCAGACTaGACTATGCCCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAIGGSD*TMPCLF
Trigger: GAAGAGACAGGGCATAGTGCAGTCTGACCCACCAAT...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCAGGTTGTCACTGGCTTaGAGGATGTCCCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCRLSLA*RMSPKL
Trigger: CAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCT...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAAGGTTGTCACTGGCTTaGAGGATGTCCCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: AAPPGRRSAYTEAAPSPSRLSLA*RMSPKL
Trigger: CAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCT...TGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGAGGTTGTCACTGGCTTaGAGGATGTCCCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: APPGRRSAYTEAAPSPSVRLSLA*RMSPKL
Trigger: CAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCT...CACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCGTGCCTTGGTTACTaGACTGACTGTTTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHACLGY*TDCFLP
Trigger: CGGAAGGAAACAGTCAGTGCAGTAACCAAGGCACGC...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCGCGTGCCTTGGTTACTaGACTGACTGTTTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: DSSEVRGHSAPLTAYGHFACLGY*TDCFLP
Trigger: CGGAAGGAAACAGTCAGTGCAGTAACCAAGGCACGC...GAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACCTCAACGGAGGGTGGAGTAGGTaGTGGGGCCAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: QQSWDIQYSHLPRSTDLNGGWSR*WGQHGG
Trigger: TCCTCCGTGTTGGCCCCAGCACCTACTCCACCCTCC...GTTGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTGCCAGGAGAGGGCGTTaGTTGTGCTGCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVARRGR*LCCWAP
Trigger: TGGGGCCCAGCAGCACAAGCAACGCCCTCTCCTGGC...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTAACGCCAAGCCATGGTaGCCAGGGACTGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQANAKPW*PGTAGS
Trigger: TGAGCCCGCAGTCCCTGGGCACCATGGCTTGGCGTT...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CCTTGGGCCGTGCATCTGTCAGGTGTGAGGATGTGGCTCTTGTGGGGAATGACCTTGGGCACTGCAGCCTaGAGCACGATGCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: PWAVHLSGVRMWLLWGMTLGTAA*STMLLT
Trigger: TGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAA...GGTCATTCCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp CCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTTGGGCACTGCAGCCTaGAGCACGATGCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: PPGRRSAYTEAAPSPSVDLGTAA*STMLLT
Trigger: TGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAA...ATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp CTTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTGGGGATGGCAGCAGGAGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: LILGQAPSWATSLGMAAGVPEGG*NFTFID
Trigger: GTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...TCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAAACCTCTGTGCTCAGCTaGTCCCCCAGGGCGAAGGTC +
Preference number: 4 (lower is better)
Translates to: EGQLIPKPHLLLQWIGQQTSVLS*SPRAKV
Trigger: GACCTTCGCCCTGGGGGAGCAGCTGAGCACAGAGGT...TTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp CAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGAGAATTGCAACAGGGCTaGAGCCCCTTGGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: QCPSVAGEQLRFLGSTLGELQQG*SPLGRA
Trigger: TGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTC...TCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTGGGGACTTTGCAGTATaGCAGTTCCTTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAGDFAV*QFLILG
Trigger: GCCCAGAATAAGGAACTGGCATACTGCAAAGTCCCC...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCGCCATTCCAGGACGATaGTGTCCACCAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FPQRCPIAELVHLGSASFAIPGR*CPPEAG
Trigger: CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGC...GAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTGACACAGCCTGCCACTaGCAGGGACAAGCACACAAC +
Preference number: 4 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFDTACH*QGQAHN
Trigger: GTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAGCTCTCTGTCCCCGTCCGAAGAGTCCTCCTGGCTGTAATGAAGCAGCATCTCGACACAGCCTGCCACTaGCAGGGACAAGCACACAAC +
Preference number: 4 (lower is better)
Translates to: QLSVPVRRVLLAVMKQHLDTACH*QGQAHN
Trigger: GTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC...GAGATGCTGCTTCATTACAGCCAGGAGGACTCTTCGGACGGGGACAGAGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp ACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGACACAGCCTGCCACTaGCAGGGACAAGCACACAAC +
Preference number: 4 (lower is better)
Translates to: TQLITPWPFQDDAVHQRQDTACH*QGQAHN
Trigger: GTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC...CTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGAGGGAACATGGTCTGTaGCACCTTCCTTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: ACHCQGQAHNSSLRGHSRREHGL*HLPFPR
Trigger: TCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCT...CCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACAGGGAACATGGTCTGTaGCACCTTCCTTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHREHGL*HLPFPR
Trigger: TCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCT...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCAGGGAACATGGTCTGTaGCACCTTCCTTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCREHGL*HLPFPR
Trigger: TCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCT...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGAAGACATTCCCAGGGCTaGAGCAGCCAGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SPRAKVSLYRSRTFSFSGRHSQG*SSQSLE
Trigger: TTCCAGAGACTGGCTGCTGCAGCCCTGGGAATGTCT...TCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGAGCACCGTCAGGGCCTaGAGCGCCTCCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLSTVRA*SASHSC
Trigger: ACAGGAATGGGAGGCGCTCCAGGCCCTGACGGTGCT...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTGCAACTTCACTTTCATTGACTTGGGCACTGCAGCCTGCAGCACGATGCTCTAGCACCGTCAGGGCCTaGAGCGCCTCCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: AATSLSLTWALQPAARCSSTVRA*SASHSC
Trigger: ACAGGAATGGGAGGCGCTCCAGGCCCTGACGGTGCT...AGAGCATCGTGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTTTTGGGACGAGGTGGTaGAGAGGGGATCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFFGTRW*RGDQRP
Trigger: AGGACGCTGATCCCCTCTCCACCACCTCGTCCCAAA...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGGGGTGGAGTAGGTGCTaGGGCCAACACGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: QIPCPAKMSIGHSLPLPGGWSRC*GQHGGQ
Trigger: TTGTCCTCCGTGTTGGCCCCAGCACCTACTCCACCC...CCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCAGGAACATTAGGGGCTaGGTCGGCGAGGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: FPQRCPIAELVHLGSASFRNIRG*VGEAQA
Trigger: TGCTTGGGCCTCGCCGACCCAGCCCCTAATGTTCCT...GAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGGGCAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACAGGAACATTAGGGGCTaGGTCGGCGAGGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QGQQSWDIQYSHLPRSTDRNIRG*VGEAQA
Trigger: TGCTTGGGCCTCGCCGACCCAGCCCCTAATGTTCCT...GTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTGGCGGCAGTGGAGCTTaGGAGCTGCTTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVGGSGA*ELLEEG
Trigger: CCCCTCCTCAAGCAGCTCCCAAGCTCCACTGCCGCC...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTCGAGGGCATCCAGGTaGTGCAGCGCGCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVSRASR*CSALLP
Trigger: GGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGA...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCGGGAGAGGTTGTCACTGGCTTGCAGGATGTCCCCCAAACTGTTATCATTGTCTGGAAACTCAGTGGCTaGAAGAGCGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PGEVVTGLQDVPQTVIIVWKLSG*KSGLPG
Trigger: GCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCA...GACAATGATAACAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGGACTGGAAACTCAGTaGCTGGAAGAGCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLEYMSQDHIQQLEWLGQGLETQ*LEERAA
Trigger: GGCAGCCCGCTCTTCCAGCCACTGAGTTTCCAGTCC...TTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCAGGGCTGCCCTGGGACTaGAAACTCAGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RDKHTTHHSVAIPGRCCPGLPWD*KLSGWK
Trigger: CTTCCAGCCACTGAGTTTCCAGTCCCAGGGCAGCCC...TGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTGGGGGCACGTGGATGCTaGCCAGGGAGAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RVLSQKVAATSLSLTWALGARGC*PGRAQA
Trigger: GGCCTGAGCTCTCCCTGGCCAGCATCCACGTGCCCC...CAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATCACGTCAGGTCGTCCTaGGGGACACTCCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PLPGTSTQLITPWPFQDDHVRSS*GTLLGK
Trigger: TTTGCCAAGGAGTGTCCCCCAGGACGACCTGACGTG...ATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCGGTGATGGCTGCAGGTaGCTGGATGGGGCTAAATGG +
Preference number: 4 (lower is better)
Translates to: QGEGQLIPKPHLLLQWIGGDGCR*LDGAKW
Trigger: CCATTTAGCCCCATCCAGCCACCTGCAGCCATCACC...GCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp TGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGGGTGATGGCTGCAGGTaGCTGGATGGGGCTAAATGG +
Preference number: 4 (lower is better)
Translates to: CQGQAHNSSLRGHSRTMLGDGCR*LDGAKW
Trigger: CCATTTAGCCCCATCCAGCCACCTGCAGCCATCACC...CAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QIPCPAKMSIGHSLPLPGASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...CCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCCACCTTCTCCTTCAGTaGATTGGCCAGCAACATGAC +
Preference number: 4 (lower is better)
Translates to: RALLVSGQPAWLQGGDHSHLLLQ*IGQQHD
Trigger: GTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTG...GCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAACATGACCTGGGTTCCACAGGAGGGAACTaGTCCACCTCGCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: IPKPHLLLQWIGQQHDLGSTGGN*STSPTS
Trigger: AGAGGTGGGCGAGGTGGACCAGTTCCCTCCTGTGGA...ACCCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCCTCTGGGGTCATAGGTTCCACTGTTGTCAGGGCATaGAGAGTGACGGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: SLPGFKVEITASSGVIGSTVVRA*RVTGPE
Trigger: CTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGT...GGAACCTATGACCCCAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTATCACAGCAGCAGTTTaGTTCTCAGCAGAAATGCCC +
Preference number: 4 (lower is better)
Translates to: LVGGGSMELQQGCSPLGRITAAV*FSAEMP
Trigger: GGGCATTTCTGCTGAGAACCAAACTGCTGCTGTGAT...ACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGACCCCTGACAGCATATaGCCACTTCAAGTCACACAG +
Preference number: 4 (lower is better)
Translates to: LITPWPFQDDAVHQRQGWTPDSI*PLQVTQ
Trigger: CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT...CCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTGCAACTTCACTTTCATTGACTTGGGCACTGCAGCCTGCAGCACGATGCTCTCACCTACGCCAAGCCTaGGGGTCCATGTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: AATSLSLTWALQPAARCSHLRQA*GSMFPG
Trigger: TCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTG...AGAGCATCGTGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTTGGCGGGGGAAGCATaGAATTGCAACAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PPGRRSAYTEAAPSPSVDLAGEA*NCNRAA
Trigger: TGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAA...ATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp TGTCACAGGAAGGGCACTGCTAGGCTTGATCGATTCCAGGGGCACGTGGATGCTCACCAGAGGCAGGGCTaGGGACTTTGCAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: CHRKGTARLDRFQGHVDAHQRQG*GLCSMP
Trigger: TGGCATACTGCAAAGTCCCCAGCCCTGCCTCTGGTG...AGCATCCACGTGCCCCTGGAATCGATCAAGCCTAGCAGTGCCCTTCCTGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCGCCTGTCCCCACGGCTaGAGGCACGCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VMRPNSMSCQDVHRTQPAACPHG*RHAFPR
Trigger: TCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGC...GGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTTCCTTCCGAGTCAGGCAGGGTTAAGGTAGCCACCTCGCCATTGATGACCTGCATCCAGCAGCTAGAGTaGCTGGGACAAGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: FPSESGRVKVATSPLMTCIQQLE*LGQAGG
Trigger: CCCGCCAGCTTGTCCCAGCCACTCTAGCTGCTGGAT...GCAGGTCATCAATGGCGAGGTGGCTACCTTAACCCTGCCTGACTCGGAAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp TTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCATCCAGCAGCTAGAGTaGCTGGGACAAGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: FPQRCPIAELVHLGSASFIQQLE*LGQAGG
Trigger: CCCGCCAGCTTGTCCCAGCCACTCTAGCTGCTGGAT...GAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACTGAGCTTGTTCACCTaGGCTCCGCAAGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: RDKHTTHHSVAIPGRCCPLSLFT*APQASP
Trigger: GGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAG...TGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAACATGACCTGGGTCTGAGCTTGTTCACCTaGGCTCCGCAAGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: IPKPHLLLQWIGQQHDLGLSLFT*APQASP
Trigger: GGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAG...ACCCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp ACCAGGGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGCTGAGCTTGTTCACCTaGGCTCCGCAAGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: TREHGLCHLPFPRDVRLLLSLFT*APQASP
Trigger: GGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAG...CAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGGCATGGAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGCAGCAGCCAGTCTCTaGAAAGCTCTTGGATTTATT +
Preference number: 4 (lower is better)
Translates to: RAWRVTGPEPSSSQGSLPAAASL*KALGFI
Trigger: AATAAATCCAAGAGCTTTCCAGAGACTGGCTGCTGC...AGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCCTTTACCCGCCTGCTTaGGGAATGTCCTCCTACTTG +
Preference number: 4 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCLYPPA*GMSSYL
Trigger: CAAGTAGGAGGACATTCCCCAAGCAGGCGGGTAAAG...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582486.5
CDS-3UTR CCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGCCTGCCACTTCAGTaGATTGGCCAGCAACATGAC +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLSLPLQ*IGQQHD
Trigger: GTCATGTTGCTGGCCAATCCACTGAAGTGGCAGGCT...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582486.5
3UTR CAA 72 bp CACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTaGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCT +
Preference number: 4 (lower is better)
Translates to: HLPFPRDVRLLS*FTWAPQASPVS
Trigger: AGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CAA 72 bp GGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATaGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLCHLPFPRDVR*LSLFTWAPQAS
Trigger: GGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CAA 72 bp GGTCGTGTCCAGCTCCGCAAGGTCGATGAGCGTGCCTaGGTTACTGCACTGACTGTTTCCTTCCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: GRVQLRKVDERA*VTALTVSFRVR
Trigger: CCTGACTCGGAAGGAAACAGTCAGTGCAGTAACCAAGGCACGCTCATCGACCTTGCGGAGCTGGACACGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp ACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACTTCCCCACTTCGTTATaGAATCTCCTCCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: TRALLVSGQPAWLQGGDHFPTSL*NLLPQF
Trigger: GAACTGTGGGAGGAGATTTCATAACGAAGTGGGGAA...GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGGAAGCAGCATCTCACTaGGCAGTCTCACGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLEAASH*AVSRCC
Trigger: ACAACAACGTGAGACTGCTCAGTGAGATGCTGCTTC...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGAAGCAGCATCTCACTaGGCAGTCTCACGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHEAASH*AVSRCC
Trigger: ACAACAACGTGAGACTGCTCAGTGAGATGCTGCTTC...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp TGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGCTCTTGTTCTCACACTaGTCAAACAGCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: WLAGEAWNCNRAAAPWAVLLFSH*SNSSFI
Trigger: GATGAAGGAGCTGTTTGATCAGTGTGAGAACAAGAG...CACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCCTCTTGTTCTCACACTaGTCAAACAGCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVLLFSH*SNSSFI
Trigger: GATGAAGGAGCTGTTTGATCAGTGTGAGAACAAGAG...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGCCTTGGTTACTGCACTaGCTGTTTCCTTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLPWLLH*LFPSES
Trigger: TGACTCGGAAGGAAACAGTCAGTGCAGTAACCAAGG...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCAGCCTCTTCTAGAAGCTaGTCGAGGGCATCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RDKHTTHHSVAIPGRCCPASSRS*SRASRW
Trigger: CCACCTGGATGCCCTCGATCAGCTTCTAGAAGAGGC...TGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACGCAGCACGATGCTCTTaGCAGGTAAGGGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: NSMSCQDVHRTQPATARDAARCS*QVREPC
Trigger: ACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGC...GTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGGCCACTCCGCACCCCTaGCAGCATATGGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: GPVMRPNSMSCQDVHRTQATPHP*QHMATS
Trigger: TGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGC...CTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp TGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACATGCATCTGTCAGGTGTaGGGATGTGGCTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: CPAKMSIGHSLPLPGTSTCICQV*GCGSCG
Trigger: CCCACAAGAGCCACATCCTCACACCTGACAGATGCA...TGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGAGACCCAACATCTCGCTaGCAGTGCCCCTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: QCPSVAGEQLRFLGSTLGDPTSR*QCPSVA
Trigger: AGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTC...TCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGACCCAACATCTCGCTaGCAGTGCCCCTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: GLEYMSQDHIQQLEWLGQDPTSR*QCPSVA
Trigger: AGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTC...TTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp TGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACAAGCAATAGGGTCTGGTaGCTCAGCTCAAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: CPAKMSIGHSLPLPGTSTSNRVW*LSSSVA
Trigger: GGCCACACTTGAGCTGAGTCACCAGACCCTATTGCT...TGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACGGCAGGGAAGGGATATaGCCTCTTCCCATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: GSGDSAQVWPDLITSRPNGREGI*PLPIVR
Trigger: CCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCC...GTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATGGCAGGGAAGGGATATaGCCTCTTCCCATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: PPGRRSAYTEAAPSPSVDGREGI*PLPIVR
Trigger: CCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCC...ATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp AGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGGCAGGGAAGGGATATaGCCTCTTCCCATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: SLPLPGTSTQLITPWPFQGREGI*PLPIVR
Trigger: CCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCC...CTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp TCCACAGGAATTGGTGGGTCAGACTGCACTATGCCTGAAAGGGGACATGGCAGCAGGGCCACGTCCCTGTaGTCAAGACCCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: STGIGGSDCTMPERGHGSRATSL*SRPCLF
Trigger: GAAGAGACAGGGTCTTGATCACAGGGACGTGGCCCT...GCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR TCA 90 bp CCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCGTCGCTGAACTTCACTaGGTACCTCCAACTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PCPAKMSIGHSLPLPGTSVAELH*VPPTQG
Trigger: ACCCTGAGTTGGAGGTACTCAGTGAAGTTCAGCGAC...GCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS-3UTR TCA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTGGCCCTCAGGGTCGCTaGACTTCACTGAGTACCTCC +
Preference number: 4 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQAGPQGR*TSLSTS
Trigger: GGAGGTACTCAGTGAAGTTCAGCGACCCTGAGGGCC...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS-3UTR GCA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTGGCGTCTTTGATCTTTaGTTCTTCTGGCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLGVFDL*FFWQGH
Trigger: ATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCC...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGGGTCATCTGGGTTTTTaGTTTTCAGCAGCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: WLAGEAWNCNRAAAPWAVGHLGF*FSAAWL
Trigger: TAGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACC...CACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATCACCTTCTGGATCCGTaGCTCGTCTTCCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: DTACHCQGQAHNSSLRGHHLLDP*LVFLHH
Trigger: ATGGTGAAGGAAGACGAGGCACGGATCCAGAAGGTG...ATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACACTTCCTCTAACGTGTaGAGACGCTTGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHTSSNV*RRLVTF
Trigger: GAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGT...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp ACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGTTGTCACTGGCTTaGAGGATGTCCCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: TACHCQGQAHNSSLRGHSRLSLA*RMSPKL
Trigger: CAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCT...GGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGAGGTTGTCACTGGCTTaGAGGATGTCCCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: SQGPLRTPDSIWPLQVTQRLSLA*RMSPKL
Trigger: CAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCT...CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTAGGGCATCCAGGTGGTaGAGCGCGCTGTTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVRASRW*SALLPN
Trigger: GTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCT...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: LITPWPFQDDAVHQRQGWVPEGG*NFTFID
Trigger: GTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...CCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGAGGGGAAGCATGGAATTaGAACAGGGCTGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QCPSVAGEQLRFLGSTLGGEAWN*NRAAAP
Trigger: AGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCC...TCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp CAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGGGAAGCATGGAATTaGAACAGGGCTGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QAHNSSLRGHSRTMLSTRGEAWN*NRAAAP
Trigger: AGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCC...TCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GCCAGTAGAAGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGCAGGGCTGGGGACTTTaGAGTATGCCAGTTCCTTAT +
Preference number: 4 (lower is better)
Translates to: ASRRKQTPTPSLGVHVPGQGWGL*SMPVPY
Trigger: ATAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTG...CCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCTTCTACTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGCAGGGCTGGGGACTTTaGAGTATGCCAGTTCCTTAT +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLQGWGL*SMPVPY
Trigger: ATAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTG...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACATCGACACAGCCTGCCACTaGCAGGGACAAGCACACAAC +
Preference number: 4 (lower is better)
Translates to: SGDSAQVWPDLITSRPNIDTACH*QGQAHN
Trigger: GTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC...GATGTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGATGGCAGCAGGAGGCCAAGCCTGGGGGTCCATGTTCCCGGGACAGCAGTGAACCAAATTCCATGTCCTaGCAAGATGTCCATAGGACA +
Preference number: 4 (lower is better)
Translates to: GWQQEAKPGGPCSRDSSEPNSMS*QDVHRT
Trigger: TGTCCTATGGACATCTTGGCAGGACATGGAATTTGG...TTCACTGCTGTCCCGGGAACATGGACCCCCAGGCTTGGCCTCCTGCTGCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580646.5
CDS-3UTR GCA 90 bp ACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGAGGGAACATGGTCTGTaGCACCTTCCTTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TTHHSVAIPGRCCPPEAGREHGL*HLPFPR
Trigger: TCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCT...CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACCCAGTGTATCACCCTaGTTCCCAGGTCGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QQLNNLGLHFLRHPVPQVPSVSP*FPGRGS
Trigger: CGAGCCCCGACCTGGGAAGCAGGGTGATACACTGGG...TACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577435.5
ENST00000621870.4
CDS-3UTR GCA 90 bp GTTGGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACCCAGTGTATCACCCTaGTTCCCAGGTCGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: VGPVMRPNSMSCQDVHRTPSVSP*FPGRGS
Trigger: CGAGCCCCGACCTGGGAAGCAGGGTGATACACTGGG...TGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp CTCCTTCATCAGCTCTCTGTCCCCGTCCGAAGAGTCCTCCTGGCTGTAATGAAGTCGGACGGCGATCTGTaGCCCTTCCAGCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LLHQLSVPVRRVLLAVMKSDGDL*PFQLLV
Trigger: AACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGA...CTTCATTACAGCCAGGAGGACTCTTCGGACGGGGACAGAGAGCTGATGAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CAAGGGCAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACTCGGACGGCGATCTGTaGCCCTTCCAGCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: QGQQSWDIQYSHLPRSTDSDGDL*PFQLLV
Trigger: AACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGA...GTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGATCCACAGGAATTGGTaGGTCAGACTGCACTATGCC +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLIHRNW*VRLHYA
Trigger: GGCATAGTGCAGTCTGACCCACCAATTCCTGTGGAT...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCAATCCACAGGAATTGGTaGGTCAGACTGCACTATGCC +
Preference number: 4 (lower is better)
Translates to: GHSLPLPGTSTQLITPWPIHRNW*VRLHYA
Trigger: GGCATAGTGCAGTCTGACCCACCAATTCCTGTGGAT...TGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACCGGAGGACAAACTGTTaGTCGTGTCCAGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: MSCQDVHRTQPATARDKHRRTNC*SCPAPQ
Trigger: TTGCGGAGCTGGACACGACCAACAGTTTGTCCTCCG...GTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACATGGAGCAGGTGCCACTaGCTGTTCCCAGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: RLGVHVPGSHPAARVAGTWSRCH*LFPADS
Trigger: AGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCA...TGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGATGGAGCAGGTGCCACTaGCTGTTCCCAGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: QAHNSSLRGHSRTMLSTRWSRCH*LFPADS
Trigger: AGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCA...TCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCGGCAGTGGAGCTTaGGAGCTGCTTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHGGSGA*ELLEEG
Trigger: CCCCTCCTCAAGCAGCTCCCAAGCTCCACTGCCGCC...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGGCAGGAACACTGGCTaGGACCACAGGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELGRNTG*DHRSWE
Trigger: TTCCCAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCC...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACAGGAGGAGCCCGCACTaGGGGCAGGAACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRTPDSIWPLQVTQVDKNRRSPH*GQEHWL
Trigger: CAGCCAGTGTTCCTGCCCCCAGTGCGGGCTCCTCCT...GTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTAAAGACAGCGAGGGGCAGGGAAGGGATATGACCTCTTCCCATAGTAAGGAATGCGGGCTCAACTTTTaGGGCCAAGGCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: AKDSEGQGRDMTSSHSKECGLNF*GQGWGH
Trigger: GTGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCA...TTCCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCCCCTCGCTGTCTTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTGCGGGCTCAACTTTTaGGGCCAAGGCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVCGLNF*GQGWGH
Trigger: GTGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCA...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAGCTGTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCTCGAGGGCATCCAGGTaGTGCAGCGCGCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: PAVQQLNNLGLHFLRHPVSRASR*CSALLP
Trigger: GGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGA...GACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTACAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTGGAAACTCAGTGGCTaGAAGAGCGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVWKLSG*KSGLPG
Trigger: GCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCA...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTGGACTGGAAACTCAGTaGCTGGAAGAGCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQAGLETQ*LEERAA
Trigger: GGCAGCCCGCTCTTCCAGCCACTGAGTTTCCAGTCC...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTGCAACTTCACTTTCATTGACTTGGGCACTGCAGCCTGCAGCACGATGCTCTGGGCTGCCCTGGGACTaGAAACTCAGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AATSLSLTWALQPAARCSGLPWD*KLSGWK
Trigger: CTTCCAGCCACTGAGTTTCCAGTCCCAGGGCAGCCC...AGAGCATCGTGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GCTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCATCACTTTCATTGACTTaGGCACTGCAGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AAPPGRRSAYTEAAPSPSSLSLT*ALQPAA
Trigger: TGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGA...TGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGCTGGATGGGGCTAAATaGAGAGAGTTCTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLLDGAK*REFCPR
Trigger: TCTGGGACAGAACTCTCTCCATTTAGCCCCATCCAG...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACATCGGTGATGGCTGCAGGTaGCTGGATGGGGCTAAATGG +
Preference number: 4 (lower is better)
Translates to: SGDSAQVWPDLITSRPNIGDGCR*LDGAKW
Trigger: CCATTTAGCCCCATCCAGCCACCTGCAGCCATCACC...GATGTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CGCTTGGTCACCTTCTGGATCCGTGCCTCGTCTTCCTTCACCATGGACTTGATGGGTGATGGCTGCAGGTaGCTGGATGGGGCTAAATGG +
Preference number: 4 (lower is better)
Translates to: RLVTFWIRASSSFTMDLMGDGCR*LDGAKW
Trigger: CCATTTAGCCCCATCCAGCCACCTGCAGCCATCACC...CATCAAGTCCATGGTGAAGGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QDVHRTQPATARDKHTTHASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...ATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGCACCTTCTCCTTCAGTaGATTGGCCAGCAACATGAC +
Preference number: 4 (lower is better)
Translates to: ACHCQGQAHNSSLRGHSRHLLLQ*IGQQHD
Trigger: GTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTG...CCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGTCAGGGCAGCCTGCCTaGCTTCAAGGTGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: TVPLSSWGTVEVSGQHIRSGQPA*LQGGDH
Trigger: GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGA...CCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTTTTCAGGGCAGCCTGCCTaGCTTCAAGGTGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: LFTWAPQASPVSMAAGDFSGQPA*LQGGDH
Trigger: GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGA...AAAATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTACCCCTGACAGCATATaGCCACTTCAAGTCACACAG +
Preference number: 4 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLTPDSI*PLQVTQ
Trigger: CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTCTGGAAAGCACCTACGCCAAGCCTaGGGGTCCATGTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: HIVIPQTFPGLQQPVSGKHLRQA*GSMFPG
Trigger: TCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTG...CTTTCCAGAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp ACCAGGGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGGCAGCAGGAGCTGGTTaGCGGGGGAAGCATGGAATT +
Preference number: 4 (lower is better)
Translates to: TREHGLCHLPFPRDVRLLAAGAG*RGKHGI
Trigger: AATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGC...CAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGCAGGAGCTGGTTaGCGGGGGAAGCATGGAATT +
Preference number: 4 (lower is better)
Translates to: KHTTHHSVAIPGRCCPPEAAGAG*RGKHGI
Trigger: AATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGC...CTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QIPCPAKMSIGHSLPLPGASSLF*ARHLPG
Trigger: CCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGC...CCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGACACCAGAGGCAGGGCTaGGGACTTTGCAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: QAHNSSLRGHSRTMLSTRHQRQG*GLCSMP
Trigger: TGGCATACTGCAAAGTCCCCAGCCCTGCCTCTGGTG...TCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCCAACTCATCACTCCGTaGCCATTCCAGGACGATGCT +
Preference number: 4 (lower is better)
Translates to: PCPAKMSIGHSLPLPGTSQLITP*PFQDDA
Trigger: AGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG...GCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAACTCATCACTCCGTaGCCATTCCAGGACGATGCT +
Preference number: 4 (lower is better)
Translates to: HSLPLPGTSTQLITPWPFQLITP*PFQDDA
Trigger: AGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG...GAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCAACTCATCACTCCGTaGCCATTCCAGGACGATGCT +
Preference number: 4 (lower is better)
Translates to: TTHHSVAIPGRCCPPEAGQLITP*PFQDDA
Trigger: AGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG...CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHLPIPS*ACHEAK
Trigger: TTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAG...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTGCCTGTCCCCACGGCTaGAGGCACGCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVACPHG*RHAFPR
Trigger: TCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGC...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGGTGCCCCTCAGTAGCTaGGGAACAGTTGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: TTHHSVAIPGRCCPPEAGVPLSS*GTVEVS
Trigger: AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCAC...CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATGTGCCCCTCAGTAGCTaGGGAACAGTTGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: DTACHCQGQAHNSSLRGHVPLSS*GTVEVS
Trigger: AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCAC...ATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCGACTCAGCTCAAGTGTaGCCCGATCTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: PGTSTQLITPWPFQDDAVDSAQV*PDLITS
Trigger: GGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTC...GACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTCTGGAAAGGTGGCTGGGACAAGCTaGCGGGGGCCAAGCACTGTT +
Preference number: 4 (lower is better)
Translates to: HIVIPQTFPGLQQPVSGKVAGTS*RGPSTV
Trigger: AACAGTGCTTGGCCCCCGCCAGCTTGTCCCAGCCAC...CTTTCCAGAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTGCAACTTCACTTTCATTGACTTGGGCACTGCAGCCTGCAGCACGATGCTCTATCCAGCAGCTAGAGTaGCTGGGACAAGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: AATSLSLTWALQPAARCSIQQLE*LGQAGG
Trigger: CCCGCCAGCTTGTCCCAGCCACTCTAGCTGCTGGAT...AGAGCATCGTGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTTGTGACGGAGGCTTaGAGTACATGTCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: GHSLPLPGTSTQLITPWPFVTEA*STCPRI
Trigger: GATCCTGGGACATGTACTCCAAGCCTCCGTCACAAA...TGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCTGAGCTTGTTCACCTaGGCTCCGCAAGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: QDVHRTQPATARDKHTTHLSLFT*APQASP
Trigger: GGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAG...ATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCAAGGGCAGCAGAGCTaGGATATCCAGTACAGCCAT +
Preference number: 4 (lower is better)
Translates to: TTHHSVAIPGRCCPPEAGQGQQS*DIQYSH
Trigger: ATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG...CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCAAGGGCAGCAGAGCTaGGATATCCAGTACAGCCAT +
Preference number: 4 (lower is better)
Translates to: VVSRMACPHGWRHAFPRKQGQQS*DIQYSH
Trigger: ATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG...CTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGCAGCAGGAGCTTCAGTaGATTGGCCAGCAACATGAC +
Preference number: 4 (lower is better)
Translates to: SLPLPGTSTQLITPWPFQQQELQ*IGQQHD
Trigger: GTCATGTTGCTGGCCAATCCACTGAAGCTCCTGCTG...CTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583282.5
3UTR CAA 72 bp GTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATaGGTGGGTCAGACTGCACTATGCCTGAAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: VVERGSASYPQE*VGQTALCLKGD
Trigger: GTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
3UTR CAA 72 bp ATTGACTTGGGCACTGCAGCCTGCAGCACGATGCTCTaGACAGGTAAGGGAGCCGTGTTCAGCATGGACACC +
Preference number: 4 (lower is better)
Translates to: IDLGTAACSTML*TGKGAVFSMDT
Trigger: GGTGTCCATGCTGAACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAAGTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp GAAAGGGGACATGGCAGCACGTGCACTCAGGCTGTGGTTGCCTTGTCACCCCTCCTTCCAGCTCCTTGTTaGTCTGATCACAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: ERGHGSTCTQAVVALSPLLPAPC*SDHRSQ
Trigger: TTGGCTTCTGTGATCAGATCAACAAGGAGCTGGAAG...GAGGGGTGACAAGGCAACCACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR TCA 90 bp GCCAGTAGAAGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGCTTCCAGCTCCTTGTTaGTCTGATCACAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: ASRRKQTPTPSLGVHVPGLPAPC*SDHRSQ
Trigger: TTGGCTTCTGTGATCAGATCAACAAGGAGCTGGAAG...CCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCTTCTACTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGTTCCCCACTTCGTTATaGAATCTCCTCCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: LPQGEGQLIPKPHLLLQWFPTSL*NLLPQF
Trigger: GAACTGTGGGAGGAGATTTCATAACGAAGTGGGGAA...CCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CTTGTGGGCCAGCAGTCGGACGGCGATCTGTGGCCCTTCCAGCTCCTTGTTGATTGTGGTAGGCGTCTTTaGTCTTTGCTTCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LVGQQSDGDLWPFQLLVDCGRRL*SLLLLA
Trigger: TGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACA...ATCAACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGACTGCTGGCCCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577435.5
ENST00000621870.4
CDS-3UTR TCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTGCTCCGCAAGGTCGATaGGCGTGCCTTGGTTACTGC +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVAPQGR*ACLGYC
Trigger: GCAGTAACCAAGGCACGCTCATCGACCTTGCGGAGC...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGTCCCCGGCCTGGGGCTaGAGAAGTCCAGGTCGGACT +
Preference number: 4 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQESPAWG*RSPGRT
Trigger: AGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGA...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATGCCTCTTCTAGAAGCTaGTCGAGGGCATCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QDVHRTQPATARDKHTTHASSRS*SRASRW
Trigger: CCACCTGGATGCCCTCGATCAGCTTCTAGAAGAGGC...ATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCGCAGCACGATGCTCTTaGCAGGTAAGGGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: VMRPNSMSCQDVHRTQPAAARCS*QVREPC
Trigger: ACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGC...GGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CCAGCTGTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCTCAGGGCATGGAGAGTaGCGGGACCAGAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PAVQQLNNLGLHFLRHPVSGHGE*RDQSPP
Trigger: AGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCTGA...GACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTACAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR TCA 90 bp AGACCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTCCCCAGTGGCTTCAGTaGATGCCAGTAGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RPNISLTVPLSSWGTVEVPQWLQ*MPVEGS
Trigger: GCTTCCTTCTACTGGCATTCACTGAAGCCACTGGGG...AACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp TCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACATCCCCCAGTGGCTTCAGTaGATGCCAGTAGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SGDSAQVWPDLITSRPNIPQWLQ*MPVEGS
Trigger: GCTTCCTTCTACTGGCATTCACTGAAGCCACTGGGG...GATGTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp TGGTGGGTCAGACTGCACTATGCCCTGTCTCTTCAGCATGTGGTAGGCGTCTTTCCACATGCCATCTGGTaGGAGGAGAGGGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: WWVRLHYALSLQHVVGVFPHAIW*EEREAK
Trigger: TTTGGCCTCCCTCTCCTCTCACCAGATGGCATGTGG...AAAGACGCCTACCACATGCTGAAGAGACAGGGCATAGTGCAGTCTGACCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR TCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGACCCAACATCTCGCTaGCAGTGCCCCTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELDPTSR*QCPSVA
Trigger: AGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTC...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CAAGGGCAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACAGCAATAGGGTCTGGTaGCTCAGCTCAAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QGQQSWDIQYSHLPRSTDSNRVW*LSSSVA
Trigger: GGCCACACTTGAGCTGAGTCACCAGACCCTATTGCT...GTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCAAGCAATAGGGTCTGGTaGCTCAGCTCAAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RDKHTTHHSVAIPGRCCPSNRVW*LSSSVA
Trigger: GGCCACACTTGAGCTGAGTCACCAGACCCTATTGCT...TGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAGAGATGTCCGATTGCTaGGCTTGTTCACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RLGVHVPGSHPAARVAGTEMSDC*ACSPGL
Trigger: GAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTC...TGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGGCAGGGAAGGGATATaGCCTCTTCCCATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: HRTQPATARDKHTTHHSVGREGI*PLPIVR
Trigger: CCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCC...CACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp ACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGGGCGTCTTTGATCTTTaGTTCTTCTGGCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: TTHHSVAIPGRCCPPEAGGVFDL*FFWQGH
Trigger: ATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCC...CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCACACCTTCTGGATCCGTaGCTCGTCTTCCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: VVERGSASYPQELVGQTAHLLDP*LVFLHH
Trigger: ATGGTGAAGGAAGACGAGGCACGGATCCAGAAGGTG...TGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR GCA 90 bp TGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGACTTCCTCTAACGTGTaGAGACGCTTGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: CHCQGQAHNSSLRGHSRTTSSNV*RRLVTF
Trigger: GAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGT...CGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCCTCTGGGGTCATAGGTTCCACTTCCTCTAACGTGTaGAGACGCTTGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: SLPGFKVEITASSGVIGSTSSNV*RRLVTF
Trigger: GAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGT...GGAACCTATGACCCCAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGATCGCCATTGATGACCTaGCCTTCAATAATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: DGTRALLVSGQPAWLQGGSPLMT*PSIIVL
Trigger: CAAAACAATTATTGAAGGGCAGGTCATCAATGGCGA...TCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCGCCAGGAGAGGGCGTTaGTTGTGCTGCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFARRGR*LCCWAP
Trigger: TGGGGCCCAGCAGCACAAGCAACGCCCTCTCCTGGC...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCGCCAGGAGAGGGCGTTaGTTGTGCTGCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: DSSLFHAKQEVVSRMACPARRGR*LCCWAP
Trigger: TGGGGCCCAGCAGCACAAGCAACGCCCTCTCCTGGC...GGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GAGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTAACGCCAAGCCATGGTaGCCAGGGACTGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ESSVPEGGCNFTFIDLGTNAKPW*PGTAGS
Trigger: TGAGCCCGCAGTCCCTGGGCACCATGGCTTGGCGTT...AGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GATCACAGAAGCCAATTATGTATTCCCAGTCCTCCTGGCGGTTGGAAGGATTGGAGGGCATCCAGGTGGTaGAGCGCGCTGTTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: DHRSQLCIPSPPGGWKDWRASRW*SALLPN
Trigger: GTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCT...CCAATCCTTCCAACCGCCAGGAGGACTGGGAATACATAATTGGCTTCTGTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR GCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGGCTGGAAGAGCGGGCTaGCGGGCCCCGTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVAGRAG*RAPWRR
Trigger: CCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGC...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGTTGGGCACTGCAGCCTaGAGCACGATGCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: QIPCPAKMSIGHSLPLPGLGTAA*STMLLT
Trigger: TGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAA...CCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACTTGGGCACTGCAGCCTaGAGCACGATGCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: NSMSCQDVHRTQPATARDLGTAA*STMLLT
Trigger: TGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAA...GTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp ACCAGGGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGTTGGGCACTGCAGCCTaGAGCACGATGCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: TREHGLCHLPFPRDVRLLLGTAA*STMLLT
Trigger: TGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAA...CAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHVPEGG*NFTFID
Trigger: GTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: DSSEVRGHSAPLTAYGHFVPEGG*NFTFID
Trigger: GTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...GAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CTGCACTATGCCCTGTCTCTTCAGCATGTGGTAGGCGTCTTTGATCTTTGCTTCGACCTGGGTGATGGCTaGAGGTGGCTGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: LHYALSLQHVVGVFDLCFDLGDG*RWLDGA
Trigger: AGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTC...GAAGCAAAGATCAAAGACGCCTACCACATGCTGAAGAGACAGGGCATAGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR GCA 90 bp ACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCGGGGACTTTGCAGTATaGCAGTTCCTTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TACHCQGQAHNSSLRGHSGDFAV*QFLILG
Trigger: GCCCAGAATAAGGAACTGGCATACTGCAAAGTCCCC...GGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCAGGGCTGGGGACTTTaGAGTATGCCAGTTCCTTAT +
Preference number: 4 (lower is better)
Translates to: VVSRMACPHGWRHAFPRKQGWGL*SMPVPY
Trigger: ATAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTG...CTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCACAGGGCTGGGGACTTTaGAGTATGCCAGTTCCTTAT +
Preference number: 4 (lower is better)
Translates to: QPATARDKHTTHHSVAIPQGWGL*SMPVPY
Trigger: ATAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTG...TGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCATTCCAGGACGATaGTGTCCACCAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PVMRPNSMSCQDVHRTQPAIPGR*CPPEAG
Trigger: CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGC...AGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATGACACAGCCTGCCACTaGCAGGGACAAGCACACAAC +
Preference number: 4 (lower is better)
Translates to: QDVHRTQPATARDKHTTHDTACH*QGQAHN
Trigger: GTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC...ATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp ACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGAGGGAACATGGTCTGTaGCACCTTCCTTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TQLITPWPFQDDAVHQRQREHGL*HLPFPR
Trigger: TCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCT...CTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACATCAGACATTCCCAGGGCTaGAGCAGCCAGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SGDSAQVWPDLITSRPNIRHSQG*SSQSLE
Trigger: TTCCAGAGACTGGCTGCTGCAGCCCTGGGAATGTCT...GATGTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GAAGCCAATTATGTATTCCCAGTCCTCCTGGCGGTTGGAAGGATTGGTGGCTTTCTGAGTAGCGACAGCTaGCAGGCAGAGGGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: EANYVFPVLLAVGRIGGFLSSDS*QAEGRP
Trigger: GGGCCTTCCCTCTGCCTGGCAGCTGTCGCTACTCAG...AAAGCCACCAATCCTTCCAACCGCCAGGAGGACTGGGAATACATAATTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577435.5
ENST00000621870.4
CDS-3UTR GCA 90 bp CATGTGGTAGGCGTCTTTGATCTTTGCTTCTTCTGGCAGGGCCATGGTCCAGCTCACTGGCAACAGGGCTaGAGGGATCTGAGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: HVVGVFDLCFFWQGHGPAHWQQG*RDLSSD
Trigger: GTCGCTACTCAGATCCCTGCAGCCCTGTTGCCAGTG...AGCTGGACCATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577435.5
ENST00000621870.4
CDS-3UTR GCA 90 bp GTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCAGGTCAGACTGCACTATaGCTGAAAGGGGACATGGCA +
Preference number: 4 (lower is better)
Translates to: VVERGSASYPQELVGQTAGQTAL*LKGDMA
Trigger: TGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACC...TGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR GCA 90 bp GGTCAGACTGCACTATGCCTGAAAGGGGACATGGCAGCACGTGCACTCAGGCTGATTGGTGGGTCAGACTaGACTATGCCTGAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GQTALCLKGDMAARALRLIGGSD*TMPERG
Trigger: TCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAAT...CAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR CCA 90 bp CACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGAGTCCTCCTGGCGGTTaGAAGGATTGGTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: HNSSLRGHSRTMLSTRGRSPPGG*KDWWLY
Trigger: ATAAAGCCACCAATCCTTCCAACCGCCAGGAGGACT...CCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTTATTCCCAGTCCTCCTaGCGGTTGGAAGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFYSQSS*RLEGLV
Trigger: CACCAATCCTTCCAACCGCCAGGAGGACTGGGAATA...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACTATTCCCAGTCCTCCTaGCGGTTGGAAGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: MSCQDVHRTQPATARDKHYSQSS*RLEGLV
Trigger: CACCAATCCTTCCAACCGCCAGGAGGACTGGGAATA...GTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TGGTGGGTCAGACTGCACTATGCCCTGTCTCTTCAGCATGTGGTAGGCGTCTTTTCGGACGGCGATCTGTaGCCCTTCCAGCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: WWVRLHYALSLQHVVGVFSDGDL*PFQLLV
Trigger: AACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGA...AAAGACGCCTACCACATGCTGAAGAGACAGGGCATAGTGCAGTCTGACCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582376.1
ENST00000621870.4
CDS-3UTR CCA 90 bp TCTCTTCAGCATGTGGTAGGCGTCTTTGATCTTTGCTTCTTCTGGCAGGGCCATAGCACCGTCAGGGCCTaGAGCGCCTCCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: SLQHVVGVFDLCFFWQGHSTVRA*SASHSC
Trigger: ACAGGAATGGGAGGCGCTCCAGGCCCTGACGGTGCT...ATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATGCTGAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582376.1
ENST00000621870.4
CDS-3UTR CCA 90 bp GAAGCCAATTATGTATTCCCAGTCCTCCTGGCGGTTGGAAGGATTGGTGGCTTTAGCACCGTCAGGGCCTaGAGCGCCTCCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: EANYVFPVLLAVGRIGGFSTVRA*SASHSC
Trigger: ACAGGAATGGGAGGCGCTCCAGGCCCTGACGGTGCT...AAAGCCACCAATCCTTCCAACCGCCAGGAGGACTGGGAATACATAATTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGCCTATCCACAGGAATTaGTGGGTCAGACTGCACTAT +
Preference number: 4 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLPIHRN*WVRLHY
Trigger: ATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGG...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGGGGAGAGGTTGTCACTaGCTTGCAGGATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLGRGCH*LAGCPP
Trigger: TGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCC...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGACGGAGGACAAACTGTTaGTCGTGTCCAGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: QAHNSSLRGHSRTMLSTRRRTNC*SCPAPQ
Trigger: TTGCGGAGCTGGACACGACCAACAGTTTGTCCTCCG...TCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTAGGGTGGCCTCGGCCTaGCTAGAGGAGCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPRVASA*LEERLR
Trigger: ACGGAGCCGCTCCTCTAGCCAGGCCGAGGCCACCCT...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCGTTGCTTGTGCTGCTaGGCCCCAGGGTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACRCLCC*APGWPR
Trigger: CCGAGGCCACCCTGGGGCCCAGCAGCACAAGCAACG...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCGGCGGCAGTGGAGCTTaGGAGCTGCTTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: DSSLFHAKQEVVSRMACPGGSGA*ELLEEG
Trigger: CCCCTCCTCAAGCAGCTCCCAAGCTCCACTGCCGCC...GGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGGCGGCAGTGGAGCTTaGGAGCTGCTTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VAGEQLRFLGSTLGHMSSGGSGA*ELLEEG
Trigger: CCCCTCCTCAAGCAGCTCCCAAGCTCCACTGCCGCC...ACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCGGCGGCAGTGGAGCTTaGGAGCTGCTTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFGGSGA*ELLEEG
Trigger: CCCCTCCTCAAGCAGCTCCCAAGCTCCACTGCCGCC...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTGGCAGGAACACTGGCTaGGACCACAGGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVGRNTG*DHRSWE
Trigger: TTCCCAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCC...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTAGGAGGAGCCCGCACTaGGGGCAGGAACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: VAGEQLRFLGSTLGHMSSRRSPH*GQEHWL
Trigger: CAGCCAGTGTTCCTGCCCCCAGTGCGGGCTCCTCCT...ACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTTTTTGGGGCCAAGGCTaGGGCCACTCCAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFFWGQG*GHSSRK
Trigger: TTTTCTACTGGAGTGGCCCCAGCCTTGGCCCCAAAA...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
56% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAAGCCCGAGGTCACTTTaGCCTCTTCTAGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QPATARDKHTTHHSVAIPSPRSL*PLLEAD
Trigger: ATCAGCTTCTAGAAGAGGCCAAAGTGACCTCGGGCT...TGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACTGGAAACTCAGTGGCTaGAAGAGCGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHWKLSG*KSGLPG
Trigger: GCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCA...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTGTGGAAACTCAGTGGCTaGAAGAGCGGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RVLSQKVAATSLSLTWALWKLSG*KSGLPG
Trigger: GCCCGGCAGCCCGCTCTTCCAGCCACTGAGTTTCCA...CAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGGGACTGGAAACTCAGTaGCTGGAAGAGCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSVAGEQLRFLGSTLGHMGLETQ*LEERAA
Trigger: GGCAGCCCGCTCTTCCAGCCACTGAGTTTCCAGTCC...CATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTGGGCTGCCCTGGGACTaGAAACTCAGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVGLPWD*KLSGWK
Trigger: CTTCCAGCCACTGAGTTTCCAGTCCCAGGGCAGCCC...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTCACGTCAGGTCGTCCTaGGGGACACTCCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELHVRSS*GTLLGK
Trigger: TTTGCCAAGGAGTGTCCCCCAGGACGACCTGACGTG...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTCACGTCAGGTCGTCCTaGGGGACACTCCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQAHVRSS*GTLLGK
Trigger: TTTGCCAAGGAGTGTCCCCCAGGACGACCTGACGTG...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCTCACTTTCATTGACTTaGGCACTGCAGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TACHCQGQAHNSSLRGHSSLSLT*ALQPAA
Trigger: TGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGA...GGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCCTCTGGGGTCATAGGTTCCTCACTTTCATTGACTTaGGCACTGCAGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLPGFKVEITASSGVIGSSLSLT*ALQPAA
Trigger: TGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGA...GGAACCTATGACCCCAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACTCACTTTCATTGACTTaGGCACTGCAGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LPLPGTSTQLITPWPFQDSLSLT*ALQPAA
Trigger: TGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGA...GTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGACTGGATGGGGCTAAATaGAGAGAGTTCTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRLDGAK*REFCPR
Trigger: TCTGGGACAGAACTCTCTCCATTTAGCCCCATCCAG...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: FPQRCPIAELVHLGSASFMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...GAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGACACCTTCTCCTTCAGTaGATTGGCCAGCAACATGAC +
Preference number: 4 (lower is better)
Translates to: SPRAKVSLYRSRTFSFSGHLLLQ*IGQQHD
Trigger: GTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTG...TCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAAGATCACAGCGTCCTCTaGGGTCATAGGTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: EGQLIPKPHLLLQWIGQQDHSVL*GHRFPH
Trigger: GTGGGGGAACCTATGACCCCAGAGGACGCTGTGATC...TTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGATCACAGCGTCCTCTaGGGTCATAGGTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELDHSVL*GHRFPH
Trigger: GTGGGGGAACCTATGACCCCAGAGGACGCTGTGATC...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACATGCCTGGCTTCAAGGTaGAGATCACAGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RLGVHVPGSHPAARVAGTCLASR*RSQRPL
Trigger: CAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCA...TGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCTGCCTGGCTTCAAGGTaGAGATCACAGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FPQRCPIAELVHLGSASFCLASR*RSQRPL
Trigger: CAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCA...GAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACATCACTGTTGTCAGGGCATaGAGAGTGACGGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: SGDSAQVWPDLITSRPNITVVRA*RVTGPE
Trigger: CTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGT...GATGTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCATCACAGCAGCAGTTTaGTTCTCAGCAGAAATGCCC +
Preference number: 4 (lower is better)
Translates to: QEVVSRMACPHGWRHAFPITAAV*FSAEMP
Trigger: GGGCATTTCTGCTGAGAACCAAACTGCTGCTGTGAT...GGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACATCAGGTGTGAGGATGTaGCTCTTGTGGGGAATGACC +
Preference number: 4 (lower is better)
Translates to: CPAKMSIGHSLPLPGTSTSGVRM*LLWGMT
Trigger: GGTCATTCCCCACAAGAGCCACATCCTCACACCTGA...TGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CATGTGGTAGGCGTCTTTGATCTTTGCTTCTTCTGGCAGGGCCATGGTCCAGCTGCAGCAGGAGCTGGTTaGCGGGGGAAGCATGGAATT +
Preference number: 4 (lower is better)
Translates to: HVVGVFDLCFFWQGHGPAAAGAG*RGKHGI
Trigger: AATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGC...AGCTGGACCATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp ACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCAACTCATCACTCCGTaGCCATTCCAGGACGATGCT +
Preference number: 4 (lower is better)
Translates to: TQPATARDKHTTHHSVAIQLITP*PFQDDA
Trigger: AGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG...AATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: TACHCQGQAHNSSLRGHSLPIPS*ACHEAK
Trigger: TTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAG...GGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: CHCQGQAHNSSLRGHSRTLPIPS*ACHEAK
Trigger: TTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAG...CGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCGAGAAGGGGAAATACTaGCTCTCTTCATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVEKGKY*LSSFSF
Trigger: GAAGGAAAATGAAGAGAGCCAGTATTTCCCCTTCTC...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCGTGCCCCTCAGTAGCTaGGGAACAGTTGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: QGEGQLIPKPHLLLQWIGVPLSS*GTVEVS
Trigger: AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCAC...GCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGACCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTGACTCAGCTCAAGTGTaGCCCGATCTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: RPNISLTVPLSSWGTVEVDSAQV*PDLITS
Trigger: GGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTC...AACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGTGGCTGGGACAAGCTaGCGGGGGCCAAGCACTGTT +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHVAGTS*RGPSTV
Trigger: AACAGTGCTTGGCCCCCGCCAGCTTGTCCCAGCCAC...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCTTTGTGACGGAGGCTTaGAGTACATGTCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: TACHCQGQAHNSSLRGHSFVTEA*STCPRI
Trigger: GATCCTGGGACATGTACTCCAAGCCTCCGTCACAAA...GGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACGTCAGGTACGTCAGGGCCTaGAGCGCCTCCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: SSITLVFTFSDTLSPRYVRYVRA*SASHSC
Trigger: ACAGGAATGGGAGGCGCTCCAGGCCCTGACGTACCT...GACGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577435.5
CDS-3UTR CCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTGGTTGGAAGGATTGGTaGCTTTATCAGCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAGWKDW*LYQLDE
Trigger: TTCATCCAGCTGATAAAGCCACCAATCCTTCCAACC...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp ATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATGCCTGAAAGGCGTGCACTCAGGCTGTaGTTGCCTTGTCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: ISVLSTGIGGSDCTMPERRALRL*LPCHPS
Trigger: GGAGGGGTGACAAGGCAACCACAGCCTGAGTGCACG...CCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
3UTR CAA 72 bp GTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATaGGTGGGTCAGACTGCACTATGCCCTGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VVERGSASYPQE*VGQTALCPVSS
Trigger: TGAAGAGACAGGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
3UTR CAA 72 bp TTCTGGATCCGTGCCTCGTCTTCCTTCACCATGGACTaGATGAGCTTGTTGGCCTCCTGCAGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: FWIRASSSFTMD*MSLLASCRSSG
Trigger: CCCAGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGAAGACGAGGCACGGATCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR TCA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATTCCCCACTTCGTTATaGAATCTCCTCCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRFPTSL*NLLPQF
Trigger: GAACTGTGGGAGGAGATTTCATAACGAAGTGGGGAA...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp TGCACTATGCCTGAAAGGGGACATGGCAGCACGTGCACTCAGGCTGTGGTTGCCTGTGGTAGGCGTCTTTaGTCTTTGCTTCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: CTMPERGHGSTCTQAVVACGRRL*SLLLLA
Trigger: TGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACA...GGCAACCACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR TCA 90 bp GGACGAGGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCATGTGGTAGGCGTCTTTaGTCTTTGCTTCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GRGGGEGISVLSTGIGGSCGRRL*SLLLLA
Trigger: TGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACA...TGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACCTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584243.5
ENST00000621870.4
CDS-3UTR TCA 90 bp CAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCGAAGCAGCATCTCACTaGGCAGTCTCACGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QGEGQLIPKPHLLLQWIGEAASH*AVSRCC
Trigger: ACAACAACGTGAGACTGCTCAGTGAGATGCTGCTTC...GCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTCCCCGGCCTGGGGCTaGAGAAGTCCAGGTCGGACT +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYSPAWG*RSPGRT
Trigger: AGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTGCCTCTTCTAGAAGCTaGTCGAGGGCATCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVASSRS*SRASRW
Trigger: CCACCTGGATGCCCTCGATCAGCTTCTAGAAGAGGC...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCCCGGGACAGCAGTaGAGTCAGGGGCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYFPGQQ*SQGPLR
Trigger: GCGGAGTGGCCCCTGACTTCACTGCTGTCCCGGGAA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTCCCCAGTGGCTTCAGTaGATGCCAGTAGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELPQWLQ*MPVEGS
Trigger: GCTTCCTTCTACTGGCATTCACTGAAGCCACTGGGG...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp GAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAAGAGATGTCCGATTGCTaGGCTTGTTCACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: EGQLIPKPHLLLQWIGQQEMSDC*ACSPGL
Trigger: GAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTC...TTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGCAGGGAAGGGATATaGCCTCTTCCCATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: PNISLTVPLSSWGTVEVSGREGI*PLPIVR
Trigger: CCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCC...AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACAGTTCTTCATGCATaGCTCCAGCACCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VMRPNSMSCQDVHRTQPATVLHA*LQHRQG
Trigger: GCCCTGACGGTGCTGGAGGCATGCATGAAGAACTGT...GGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CATGTGGTAGGCGTCTTTGATCTTTGCTTCTTCTGGCAGGGCCATGGTCCAGCTACAGTTCTTCATGCATaGCTCCAGCACCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HVVGVFDLCFFWQGHGPATVLHA*LQHRQG
Trigger: GCCCTGACGGTGCTGGAGGCATGCATGAAGAACTGT...AGCTGGACCATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582376.1
ENST00000621870.4
CDS-3UTR GCA 90 bp CCAGGTACTGTCAGATTTGGGCTGAGGGCGCTTCAGAAAAAGCTGCCGGTCCCTATTGGTGGGTCAGACTaGACTATGCCCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGTVRFGLRALQKKLPVPIGGSD*TMPCLF
Trigger: GAAGAGACAGGGCATAGTGCAGTCTGACCCACCAAT...AGGGACCGGCAGCTTTTTCTGAAGCGCCCTCAGCCCAAATCTGACAGTACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS-3UTR GCA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCGGTCATCTGGGTTTTTaGTTTTCAGCAGCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCGHLGF*FSAAWL
Trigger: TAGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACC...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGCGTGCCTTGGTTACTaGACTGACTGTTTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: PNISLTVPLSSWGTVEVSACLGY*TDCFLP
Trigger: CGGAAGGAAACAGTCAGTGCAGTAACCAAGGCACGC...AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGGGGCGTTGCTTGTGCTaGTGGGCCCCAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVGRCLC*WAPGWP
Trigger: AGGCCACCCTGGGGCCCAGCAGCACAAGCAACGCCC...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGCCAGGAGAGGGCGTTaGTTGTGCTGCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPARRGR*LCCWAP
Trigger: TGGGGCCCAGCAGCACAAGCAACGCCCTCTCCTGGC...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCCAAAGTGGAAGAGGATaGGGAAGCCGTTTTTATCGT +
Preference number: 4 (lower is better)
Translates to: QEVVSRMACPHGWRHAFPQSGRG*GSRFYR
Trigger: ACGATAAAAACGGCTTCCGCATCCTCTTCCACTTTG...GGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATTTGGGCACTGCAGCCTaGAGCACGATGCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: QDVHRTQPATARDKHTTHLGTAA*STMLLT
Trigger: TGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAA...ATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CCAAGCACTGTTGAAGCAATAGGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATTTGGGCACTGCAGCCTaGAGCACGATGCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: PSTVEAIGSGDSAQVWPDLGTAA*STMLLT
Trigger: TGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAA...ATCGGGCCACACTTGAGCTGAGTCACCAGACCCTATTGCTTCAACAGTGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: DTACHCQGQAHNSSLRGHVPEGG*NFTFID
Trigger: GTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...ATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: SLPLPGTSTQLITPWPFQVPEGG*NFTFID
Trigger: GTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...CTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGAGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: SPRAKVSLYRSRTFSFSGVPEGG*NFTFID
Trigger: GTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...TCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGACCTCTGTGCTCAGCTaGTCCCCCAGGGCGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQETSVLS*SPRAKV
Trigger: GACCTTCGCCCTGGGGGAGCAGCTGAGCACAGAGGT...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGGATGTGGCTCTTGTGGGGAATGACCCATGACAGTCTCTCTTTAGAGACTCCCGGGGAAGCATGGAATTaGAACAGGGCTGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RMWLLWGMTHDSLSLETPGEAWN*NRAAAP
Trigger: AGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCC...GGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCGGGGACTTTGCAGTATaGCAGTTCCTTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GQAHNSSLRGHSRTMLSTGDFAV*QFLILG
Trigger: GCCCAGAATAAGGAACTGGCATACTGCAAAGTCCCC...GGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATCAGGGCTGGGGACTTTaGAGTATGCCAGTTCCTTAT +
Preference number: 4 (lower is better)
Translates to: PLPGTSTQLITPWPFQDDQGWGL*SMPVPY
Trigger: ATAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTG...ATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCCCAAATTCCATGTCCTaGCAAGATGTCCATAGGACA +
Preference number: 4 (lower is better)
Translates to: SCSPRAKVSLYRSRTFSFPNSMS*QDVHRT
Trigger: TGTCCTATGGACATCTTGGCAGGACATGGAATTTGG...GAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GCCAGTAGAAGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGAGAAAGCTGAGTACCTaGTTCTGGAGAAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: ASRRKQTPTPSLGVHVPGRKLST*FWRRGN
Trigger: ATTTCCCCTTCTCCAGAAGCAGGTACTCAGCTTTCT...CCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCTTCTACTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp TGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGAGTCCTCCTGGCGGTTaGAAGGATTGGTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: CQGQAHNSSLRGHSRTMLSPPGG*KDWWLY
Trigger: ATAAAGCCACCAATCCTTCCAACCGCCAGGAGGACT...CAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACAGGAATTGGTGGGTCAGACTGCACTATGCCTGAAAGGGGACATGGCAGCACGTATTCCCAGTCCTCCTaGCGGTTGGAAGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: TGIGGSDCTMPERGHGSTYSQSS*RLEGLV
Trigger: CACCAATCCTTCCAACCGCCAGGAGGACTGGGAATA...CGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR CCA 90 bp AGGATGTGGCTCTTGTGGGGAATGACCCATGACAGTCTCTCTTTAGAGACTCCCTCGGACGGCGATCTGTaGCCCTTCCAGCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RMWLLWGMTHDSLSLETPSDGDL*PFQLLV
Trigger: AACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGA...GGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AAGCTTGGACTTCTCCTCATCATCAAAAACAGGGTTTTTGGGACGAGGTGGTGGAGCACCGTCAGGGCCTaGAGCGCCTCCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: KLGLLLIIKNRVFGTRWWSTVRA*SASHSC
Trigger: ACAGGAATGGGAGGCGCTCCAGGCCCTGACGGTGCT...CCACCACCTCGTCCCAAAAACCCTGTTTTTGATGATGAGGAGAAGTCCAAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000584243.5
ENST00000621870.4
CDS-3UTR CCA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGACCTATCCACAGGAATTaGTGGGTCAGACTGCACTAT +
Preference number: 4 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRPIHRN*WVRLHY
Trigger: ATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGG...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGTCAGACTGCACTATGCCTGAAAGGGGACATGGCAGCACGTGCACTCAGGCTGCCTATCCACAGGAATTaGTGGGTCAGACTGCACTAT +
Preference number: 4 (lower is better)
Translates to: GQTALCLKGDMAARALRLPIHRN*WVRLHY
Trigger: ATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGG...CAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTTTGGGACGAGGTGGTaGAGAGGGGATCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVFGTRW*RGDQRP
Trigger: AGGACGCTGATCCCCTCTCCACCACCTCGTCCCAAA...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGCTCCTGCAGGTCATCTaGGTTTTTGCTTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLPLPGTSTQLITPWPFQLLQVI*VFAFQQ
Trigger: CTGCTGAAAAGCAAAAACCCAGATGACCTGCAGGAG...CTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGCGTTGCTTGTGCTGCTaGGCCCCAGGGTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVRCLCC*APGWPR
Trigger: CCGAGGCCACCCTGGGGCCCAGCAGCACAAGCAACG...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTGGAGCAGGTGCCACTaGCTGTTCCCAGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVWSRCH*LFPADS
Trigger: AGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCA...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATGAGGGGGCTGAGGGCTaGAGCAGAGGAGCATCGGAG +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYEGAEG*SRGASE
Trigger: CTCCGATGCTCCTCTGCTCCAGCCCTCAGCCCCCTC...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTTGGGACCACAGGAGCTaGGAAGGGAGGCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPWDHRS*EGRRQW
Trigger: CCACTGCCGCCTCCCTTCCCAGCTCCTGTGGTCCCA...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCTGGGGGCAGGAACACTaGCTGGGACCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DSSLFHAKQEVVSRMACPWGQEH*LGPQEL
Trigger: CAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCCCCCA...GGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTAGGAGGAGCCCGCACTaGGGGCAGGAACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPRRSPH*GQEHWL
Trigger: CAGCCAGTGTTCCTGCCCCCAGTGCGGGCTCCTCCT...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGCCCAACGCCAAGCCATaGTGCCCAGGGACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVPNAKP*CPGTAG
Trigger: GCCCGCAGTCCCTGGGCACCATGGCTTGGCGTTGGG...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCCTGGGGGACACTCCTTaGCAAAGTGGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: VMRPNSMSCQDVHRTQPALGDTP*QSGRGC
Trigger: GCATCCTCTTCCACTTTGCCAAGGAGTGTCCCCCAG...GGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCTGGGGGACACTCCTTaGCAAAGTGGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: GPVMRPNSMSCQDVHRTQLGDTP*QSGRGC
Trigger: GCATCCTCTTCCACTTTGCCAAGGAGTGTCCCCCAG...CTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCTGGGGGACACTCCTTaGCAAAGTGGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: QDVHRTQPATARDKHTTHLGDTP*QSGRGC
Trigger: GCATCCTCTTCCACTTTGCCAAGGAGTGTCCCCCAG...ATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCTCACTTTCATTGACTTaGGCACTGCAGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGTSTQLITPWPFQDDAVSLSLT*ALQPAA
Trigger: TGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGA...GACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGTTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: LPQGEGQLIPKPHLLLQWFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...CCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: GPVMRPNSMSCQDVHRTQMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...CTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACCACCTTCTCCTTCAGTaGATTGGCCAGCAACATGAC +
Preference number: 4 (lower is better)
Translates to: MSCQDVHRTQPATARDKHHLLLQ*IGQQHD
Trigger: GTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTG...GTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGTGCCTGGCTTCAAGGTaGAGATCACAGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLCLASR*RSQRPL
Trigger: CAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCA...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTACTGTTGTCAGGGCATaGAGAGTGACGGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELTVVRA*RVTGPE
Trigger: CTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGT...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGACTGTTGTCAGGGCATaGAGAGTGACGGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLTVVRA*RVTGPE
Trigger: CTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGT...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGAGGATGTGGCTCTTGTaGGGAATGACCCATGACAGT +
Preference number: 4 (lower is better)
Translates to: CQGQAHNSSLRGHSRTMLRMWLL*GMTHDS
Trigger: ACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT...CAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PVMRPNSMSCQDVHRTQPASSLF*ARHLPG
Trigger: CCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGC...AGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTCAACTCATCACTCCGTaGCCATTCCAGGACGATGCT +
Preference number: 4 (lower is better)
Translates to: PNISLTVPLSSWGTVEVSQLITP*PFQDDA
Trigger: AGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG...AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTGAGAAGGGGAAATACTaGCTCTCTTCATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SPPRLRAACLASRWRSQREKGKY*LSSFSF
Trigger: GAAGGAAAATGAAGAGAGCCAGTATTTCCCCTTCTC...ACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATGCGTGCCCCTCAGTAGCTaGGGAACAGTTGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: ERGSASYPQELVGQTALCVPLSS*GTVEVS
Trigger: AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCAC...GCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp GGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCTTTGTGACGGAGGCTTaGAGTACATGTCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: GQAHNSSLRGHSRTMLSTFVTEA*STCPRI
Trigger: GATCCTGGGACATGTACTCCAAGCCTCCGTCACAAA...GGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAGTAGAAGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGGCAGCAGCCAGTCTCTaGAAAGCTCTTGGATTTATT +
Preference number: 4 (lower is better)
Translates to: ASRRKQTPTPSLGVHVPGAAASL*KALGFI
Trigger: AATAAATCCAAGAGCTTTCCAGAGACTGGCTGCTGC...CCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCTTCTACTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp TCTCTTCAGCATGTGGTAGGCGTCTTTGATCTTTGCTTCTTCTGGCAGGGCCATCAGAGGGAAGGCCCGTaGCACCCAGTGTATCACCCT +
Preference number: 4 (lower is better)
Translates to: SLQHVVGVFDLCFFWQGHQREGP*HPVYHP
Trigger: AGGGTGATACACTGGGTGCCACGGGCCTTCCCTCTG...ATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATGCTGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577435.5
ENST00000621870.4
CDS-3UTR CCA 90 bp AGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACGTCCTCCAGCTCCTTCACTaGCAACAGGGCTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SSITLVFTFSDTLSPRYVLQLLH*QQGCRD
Trigger: ATCCCTGCAGCCCTGTTGCCAGTGAAGGAGCTGGAG...GACGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577435.5
CDS-3UTR CCA 90 bp GTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGCTCCAGCTCCTTCACTaGCAACAGGGCTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: VQQLNNLGLHFLRHPVPQLQLLH*QQGCRD
Trigger: ATCCCTGCAGCCCTGTTGCCAGTGAAGGAGCTGGAG...CTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577435.5
ENST00000621870.4
CDS-3UTR CCA 90 bp CTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACTGTCAGATTTGGGCTCCCTGTGGCCTGTTTaGTCATCCCGTTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGLHFLRHPVPQVLSDLGSLWPV*SSRYLQ
Trigger: CTGGAGGTAACGGGATGACCAAACAGGCCACAGGGA...GCCCAAATCTGACAGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS-3UTR CCA 90 bp TGCAACTTCACTTTCATTGACTTGGGCACTGCAGCCTGCAGCACGATGCTCTTGGCCTCCAGAGGGGAATaGAGCGCTCCAGTCCATGAT +
Preference number: 4 (lower is better)
Translates to: CNFTFIDLGTAACSTMLLASRGE*SAPVHD
Trigger: ATCATGGACTGGAGCGCTCCATTCCCCTCTGGAGGC...CAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS-3UTR TCA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCTTCCAGCTCCTTGTTaGTCTGATCACAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFLPAPC*SDHRSQ
Trigger: TTGGCTTCTGTGATCAGATCAACAAGGAGCTGGAAG...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTTTCCCCACTTCGTTATaGAATCTCCTCCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFFPTSL*NLLPQF
Trigger: GAACTGTGGGAGGAGATTTCATAACGAAGTGGGGAA...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAGAAGCAGCATCTCACTaGGCAGTCTCACGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RLGVHVPGSHPAARVAGTEAASH*AVSRCC
Trigger: ACAACAACGTGAGACTGCTCAGTGAGATGCTGCTTC...TGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCACTCTTGTTCTCACACTaGTCAAACAGCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: QPATARDKHTTHHSVAIPLLFSH*SNSSFI
Trigger: GATGAAGGAGCTGTTTGATCAGTGTGAGAACAAGAG...TGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp TCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACATCCCTTGGTTACTGCACTaGCTGTTTCCTTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: SGDSAQVWPDLITSRPNIPWLLH*LFPSES
Trigger: TGACTCGGAAGGAAACAGTCAGTGCAGTAACCAAGG...GATGTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp TCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACATCGTGGGGAATGACCCATaGCAGTCTCTCTTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: SGDSAQVWPDLITSRPNIVGNDP*QSLFRD
Trigger: GTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCAC...GATGTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CAAGGGCAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACGTGGGGAATGACCCATaGCAGTCTCTCTTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: QGQQSWDIQYSHLPRSTDVGNDP*QSLFRD
Trigger: GTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCAC...GTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp GGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACTTTGGAGAGACGACTTTTGCATCTGTCAGGTGTaGGGATGTGGCTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GLHFLRHPVPQVLWRDDFCICQV*GCGSCG
Trigger: CCCACAAGAGCCACATCCTCACACCTGACAGATGCA...AAAGTCGTCTCTCCAAAGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR TCA 90 bp CACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTCTGGAAAGAGCAATAGGGTCTGGTaGCTCAGCTCAAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: HIVIPQTFPGLQQPVSGKSNRVW*LSSSVA
Trigger: GGCCACACTTGAGCTGAGTCACCAGACCCTATTGCT...CTTTCCAGAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACTGTCAGATTTGGGCCTGTCAGATTTGGGCTaGGGGCGCTTCAGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: LGLHFLRHPVPQVLSDLGLSDLG*GRFRKS
Trigger: GCTTTTTCTGAAGCGCCCTCAGCCCAAATCTGACAG...GCCCAAATCTGACAGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS-3UTR GCA 90 bp TATCCACAGGAATTGGTGGGTCAGACTGCACTATGCCTGAAAGGGGACATGGCAACAGTTCTTCATGCATaGCTCCAGCACCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: YPQELVGQTALCLKGDMATVLHA*LQHRQG
Trigger: GCCCTGACGGTGCTGGAGGCATGCATGAAGAACTGT...TGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR GCA 90 bp AAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGATTGGTGGGTCAGACTaGACTATGCCCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KHTTHHSVAIPGRCCPPEIGGSD*TMPCLF
Trigger: GAAGAGACAGGGCATAGTGCAGTCTGACCCACCAAT...CTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAACTTCCTCTAACGTGTaGAGACGCTTGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: GLEYMSQDHIQQLEWLGQTSSNV*RRLVTF
Trigger: GAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGT...TTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTCGCCATTGATGACCTaGCCTTCAATAATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: AKQEVVSRMACPHGWRHASPLMT*PSIIVL
Trigger: CAAAACAATTATTGAAGGGCAGGTCATCAATGGCGA...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACATCGCCATTGATGACCTaGCCTTCAATAATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: PEPSSSQGSLPGFKVEITSPLMT*PSIIVL
Trigger: CAAAACAATTATTGAAGGGCAGGTCATCAATGGCGA...TGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGGCGTGCCTTGGTTACTaGACTGACTGTTTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GPVMRPNSMSCQDVHRTQACLGY*TDCFLP
Trigger: CGGAAGGAAACAGTCAGTGCAGTAACCAAGGCACGC...CTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATGGAGGGTGGAGTAGGTaGTGGGGCCAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYGGWSR*WGQHGG
Trigger: TCCTCCGTGTTGGCCCCAGCACCTACTCCACCCTCC...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTGGAGGGTGGAGTAGGTaGTGGGGCCAACACGGAGGA +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACGGWSR*WGQHGG
Trigger: TCCTCCGTGTTGGCCCCAGCACCTACTCCACCCTCC...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATAACGCCAAGCCATGGTaGCCAGGGACTGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYNAKPW*PGTAGS
Trigger: TGAGCCCGCAGTCCCTGGGCACCATGGCTTGGCGTT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTAACGCCAAGCCATGGTaGCCAGGGACTGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACNAKPW*PGTAGS
Trigger: TGAGCCCGCAGTCCCTGGGCACCATGGCTTGGCGTT...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATGGTGCAGCGCGCTGTTaGCCAACGCCAAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYGAARC*PTPSHG
Trigger: ACCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACC...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGCAAAGTGGAAGAGGATaGGGAAGCCGTTTTTATCGT +
Preference number: 4 (lower is better)
Translates to: SQGPLRTPDSIWPLQVTQQSGRG*GSRFYR
Trigger: ACGATAAAAACGGCTTCCGCATCCTCTTCCACTTTG...CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCCAAAGTGGAAGAGGATaGGGAAGCCGTTTTTATCGT +
Preference number: 4 (lower is better)
Translates to: PCPAKMSIGHSLPLPGTSQSGRG*GSRFYR
Trigger: ACGATAAAAACGGCTTCCGCATCCTCTTCCACTTTG...GCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: GQAHNSSLRGHSRTMLSTVPEGG*NFTFID
Trigger: GTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...GGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATGACCTGGGTGATGGCTaGAGGTGGCTGGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYDLGDG*RWLDGA
Trigger: AGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTC...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGGGAAGCATGGAATTaGAACAGGGCTGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHGEAWN*NRAAAP
Trigger: AGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCC...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp CAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGCAGGGCTGGGGACTTTaGAGTATGCCAGTTCCTTAT +
Preference number: 4 (lower is better)
Translates to: QIPCPAKMSIGHSLPLPGQGWGL*SMPVPY
Trigger: ATAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTG...CCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTCCAAATTCCATGTCCTaGCAAGATGTCCATAGGACA +
Preference number: 4 (lower is better)
Translates to: DVRLLSLFTWAPQASPVSPNSMS*QDVHRT
Trigger: TGTCCTATGGACATCTTGGCAGGACATGGAATTTGG...AGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCACCAAATTCCATGTCCTaGCAAGATGTCCATAGGACA +
Preference number: 4 (lower is better)
Translates to: QPATARDKHTTHHSVAIPPNSMS*QDVHRT
Trigger: TGTCCTATGGACATCTTGGCAGGACATGGAATTTGG...TGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTCCAAATTCCATGTCCTaGCAAGATGTCCATAGGACA +
Preference number: 4 (lower is better)
Translates to: ACSPGLRKLPPCLWQLVIPNSMS*QDVHRT
Trigger: TGTCCTATGGACATCTTGGCAGGACATGGAATTTGG...AATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGAGAAAGCTGAGTACCTaGTTCTGGAGAAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: CHCQGQAHNSSLRGHSRTRKLST*FWRRGN
Trigger: ATTTCCCCTTCTCCAGAAGCAGGTACTCAGCTTTCT...CGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CATGTGGTAGGCGTCTTTGATCTTTGCTTCTTCTGGCAGGGCCATGGTCCAGCTTATTCCCAGTCCTCCTaGCGGTTGGAAGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: HVVGVFDLCFFWQGHGPAYSQSS*RLEGLV
Trigger: CACCAATCCTTCCAACCGCCAGGAGGACTGGGAATA...AGCTGGACCATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000582376.1
ENST00000621870.4
CDS-3UTR CCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTAGCACCGTCAGGGCCTaGAGCGCCTCCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACSTVRA*SASHSC
Trigger: ACAGGAATGGGAGGCGCTCCAGGCCCTGACGGTGCT...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAATCCACAGGAATTGGTaGGTCAGACTGCACTATGCC +
Preference number: 4 (lower is better)
Translates to: RLGVHVPGSHPAARVAGTIHRNW*VRLHYA
Trigger: GGCATAGTGCAGTCTGACCCACCAATTCCTGTGGAT...TGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATGCATCCACAGGAATTGGTaGGTCAGACTGCACTATGCC +
Preference number: 4 (lower is better)
Translates to: ERGSASYPQELVGQTALCIHRNW*VRLHYA
Trigger: GGCATAGTGCAGTCTGACCCACCAATTCCTGTGGAT...GCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584243.5
ENST00000621870.4
CDS-3UTR CCA 90 bp CAAGGGCAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACATCCACAGGAATTGGTaGGTCAGACTGCACTATGCC +
Preference number: 4 (lower is better)
Translates to: QGQQSWDIQYSHLPRSTDIHRNW*VRLHYA
Trigger: GGCATAGTGCAGTCTGACCCACCAATTCCTGTGGAT...GTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCTGCTTTTCAGCAGCTTaGCTAAAAGCTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: DSSEVRGHSAPLTAYGHFCFSAA*LKAWTS
Trigger: AGAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCA...GAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAGCTCTCTGTCCCCGTCCGAAGAGTCCTCCTGGCTGTAATGAAGCAGCATCTCCTCCTGCAGGTCATCTaGGTTTTTGCTTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLSVPVRRVLLAVMKQHLLLQVI*VFAFQQ
Trigger: CTGCTGAAAAGCAAAAACCCAGATGACCTGCAGGAG...GAGATGCTGCTTCATTACAGCCAGGAGGACTCTTCGGACGGGGACAGAGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACCGCTTGGTCACCTTCTaGATCCGTGCCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHRLVTF*IRASSS
Trigger: GGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCG...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGGAGAGGTTGTCACTaGCTTGCAGGATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHGRGCH*LAGCPP
Trigger: TGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCC...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCGGGTGGAGTAGGTGCTaGGGCCAACACGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: DSSLFHAKQEVVSRMACPGWSRC*GQHGGQ
Trigger: TTGTCCTCCGTGTTGGCCCCAGCACCTACTCCACCC...GGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACTGGAGCAGGTGCCACTaGCTGTTCCCAGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: LRTPDSIWPLQVTQVDKNWSRCH*LFPADS
Trigger: AGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCA...GTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAAGCACTGTTGAAGCAATAGGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATTTTTGGGGCCAAGGCTaGGGCCACTCCAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PSTVEAIGSGDSAQVWPDFWGQG*GHSSRK
Trigger: TTTTCTACTGGAGTGGCCCCAGCCTTGGCCCCAAAA...ATCGGGCCACACTTGAGCTGAGTCACCAGACCCTATTGCTTCAACAGTGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTTTTTGGGGCCAAGGCTaGGGCCACTCCAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELFWGQG*GHSSRK
Trigger: TTTTCTACTGGAGTGGCCCCAGCCTTGGCCCCAAAA...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTAGCCCGAGGTCACTTTaGCCTCTTCTAGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: PNISLTVPLSSWGTVEVSSPRSL*PLLEAD
Trigger: ATCAGCTTCTAGAAGAGGCCAAAGTGACCTCGGGCT...AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCGGGCTGCCCTGGGACTaGAAACTCAGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CRVAVDSKGRIAVYFMPSGLPWD*KLSGWK
Trigger: CTTCCAGCCACTGAGTTTCCAGTCCCAGGGCAGCCC...GCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGGGCTGCCCTGGGACTaGAAACTCAGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQEGLPWD*KLSGWK
Trigger: CTTCCAGCCACTGAGTTTCCAGTCCCAGGGCAGCCC...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTCTGGGGGACACTCCTTaGCAAAGTGGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVLGDTP*QSGRGC
Trigger: GCATCCTCTTCCACTTTGCCAAGGAGTGTCCCCCAG...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACTCACTTTCATTGACTTaGGCACTGCAGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: NSMSCQDVHRTQPATARDSLSLT*ALQPAA
Trigger: TGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGA...GTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACTTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: LPLPGTSTQLITPWPFQDFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...GTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTTTCTGGATGGGGCTAAATaGAGAGAGTTCTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LFTWAPQASPVSMAAGDFLDGAK*REFCPR
Trigger: TCTGGGACAGAACTCTCTCCATTTAGCCCCATCCAG...AAAATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GATGACCCGGGAGAGGTTGTCACTGGCTTGCAGGATGTCCCCCAAACTGTTATCCTGGATGGGGCTAAATaGAGAGAGTTCTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: DDPGEVVTGLQDVPQTVILDGAK*REFCPR
Trigger: TCTGGGACAGAACTCTCTCCATTTAGCCCCATCCAG...GATAACAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGGGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGTGATGGCTGCAGGTaGCTGGATGGGGCTAAATGG +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHGDGCR*LDGAKW
Trigger: CCATTTAGCCCCATCCAGCCACCTGCAGCCATCACC...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACCAGGGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGCACCTTCTCCTTCAGTaGATTGGCCAGCAACATGAC +
Preference number: 4 (lower is better)
Translates to: TREHGLCHLPFPRDVRLLHLLLQ*IGQQHD
Trigger: GTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTG...CAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAACATGACCTGGGTCACCTTCTCCTTCAGTaGATTGGCCAGCAACATGAC +
Preference number: 4 (lower is better)
Translates to: IPKPHLLLQWIGQQHDLGHLLLQ*IGQQHD
Trigger: GTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTG...ACCCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACGATCACAGCGTCCTCTaGGGTCATAGGTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LRTPDSIWPLQVTQVDKNDHSVL*GHRFPH
Trigger: GTGGGGGAACCTATGACCCCAGAGGACGCTGTGATC...GTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTTGGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACATGCCTGGCTTCAAGGTaGAGATCACAGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VGPVMRPNSMSCQDVHRTCLASR*RSQRPL
Trigger: CAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCA...TGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTGTCAGGGCAGCCTGCCTaGCTTCAAGGTGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: RVLSQKVAATSLSLTWALSGQPA*LQGGDH
Trigger: GTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGA...CAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCATCACAGCAGCAGTTTaGTTCTCAGCAGAAATGCCC +
Preference number: 4 (lower is better)
Translates to: GQAHNSSLRGHSRTMLSTITAAV*FSAEMP
Trigger: GGGCATTTCTGCTGAGAACCAAACTGCTGCTGTGAT...GGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGATCACAGCAGCAGTTTaGTTCTCAGCAGAAATGCCC +
Preference number: 4 (lower is better)
Translates to: HRTQPATARDKHTTHHSVITAAV*FSAEMP
Trigger: GGGCATTTCTGCTGAGAACCAAACTGCTGCTGTGAT...CACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTACCCCTGACAGCATATaGCCACTTCAAGTCACACAG +
Preference number: 4 (lower is better)
Translates to: PNISLTVPLSSWGTVEVSTPDSI*PLQVTQ
Trigger: CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT...AGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAACCCCTGACAGCATATaGCCACTTCAAGTCACACAG +
Preference number: 4 (lower is better)
Translates to: QAHNSSLRGHSRTMLSTRTPDSI*PLQVTQ
Trigger: CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT...TCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAGGATGTGGCTCTTGTaGGGAATGACCCATGACAGT +
Preference number: 4 (lower is better)
Translates to: NSMSCQDVHRTQPATARDRMWLL*GMTHDS
Trigger: ACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT...GTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGAGGATGTGGCTCTTGTaGGGAATGACCCATGACAGT +
Preference number: 4 (lower is better)
Translates to: KHTTHHSVAIPGRCCPPERMWLL*GMTHDS
Trigger: ACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT...CTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp TTCCATTTCCACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FHFHIVIPQTFPGLQQPVASSLF*ARHLPG
Trigger: CCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGC...GACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTGGAAATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACCACCAGAGGCAGGGCTaGGGACTTTGCAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHHQRQG*GLCSMP
Trigger: TGGCATACTGCAAAGTCCCCAGCCCTGCCTCTGGTG...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCGAGAAGGGGAAATACTaGCTCTCTTCATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DSSEVRGHSAPLTAYGHFEKGKY*LSSFSF
Trigger: GAAGGAAAATGAAGAGAGCCAGTATTTCCCCTTCTC...GAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCACTGAGTACCTGCTTCTaGAGAAGGGGAAATACTGGC +
Preference number: 4 (lower is better)
Translates to: GQIPCPAKMSIGHSLPLPLSTCF*RRGNTG
Trigger: GCCAGTATTTCCCCTTCTCCAGAAGCAGGTACTCAG...TGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCATTTCCACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTCGACTCAGCTCAAGTGTaGCCCGATCTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: PFPHSNSTDIPRAAAASLDSAQV*PDLITS
Trigger: GGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTC...GAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTGGAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCTTTGTGACGGAGGCTTaGAGTACATGTCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: FPQRCPIAELVHLGSASFFVTEA*STCPRI
Trigger: GATCCTGGGACATGTACTCCAAGCCTCCGTCACAAA...GAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAAGGAACCAGGGAACATaGTCTGTGCCACCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: QAHNSSLRGHSRTMLSTRRNQGT*SVPPSF
Trigger: AAAGGAAGGTGGCACAGACCATGTTCCCTGGTTCCT...TCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGAGGAACCAGGGAACATaGTCTGTGCCACCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KHTTHHSVAIPGRCCPPERNQGT*SVPPSF
Trigger: AAAGGAAGGTGGCACAGACCATGTTCCCTGGTTCCT...CTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCGCAGCAGCCAGTCTCTaGAAAGCTCTTGGATTTATT +
Preference number: 4 (lower is better)
Translates to: PCPAKMSIGHSLPLPGTSAAASL*KALGFI
Trigger: AATAAATCCAAGAGCTTTCCAGAGACTGGCTGCTGC...GCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGACGAGGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGCAGCAGCCAGTCTCTaGAAAGCTCTTGGATTTATT +
Preference number: 4 (lower is better)
Translates to: GRGGGEGISVLSTGIGGSAAASL*KALGFI
Trigger: AATAAATCCAAGAGCTTTCCAGAGACTGGCTGCTGC...TGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACCTCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp AGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCCTCTGGGGTCATAGGTTCCTGCTTTTCAGCAGCTTaGCTAAAAGCCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLPGFKVEITASSGVIGSCFSAA*LKACLF
Trigger: GAAGAGACAGGCTTTTAGCCAAGCTGCTGAAAAGCA...GGAACCTATGACCCCAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS-3UTR TCA 90 bp AGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGAGCTCCTTGTTGATCTaGTCACAGAAGCCAATTATG +
Preference number: 4 (lower is better)
Translates to: SQGPLRTPDSIWPLQVTQSSLLI*SQKPIM
Trigger: CATAATTGGCTTCTGTGATCAGATCAACAAGGAGCT...CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp ACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGAGCTCCTTGTTGATCTaGTCACAGAAGCCAATTATG +
Preference number: 4 (lower is better)
Translates to: TTHHSVAIPGRCCPPEAGSSLLI*SQKPIM
Trigger: CATAATTGGCTTCTGTGATCAGATCAACAAGGAGCT...CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGCTTCCAGCTCCTTGTTaGTCTGATCACAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: QIPCPAKMSIGHSLPLPGLPAPC*SDHRSQ
Trigger: TTGGCTTCTGTGATCAGATCAACAAGGAGCTGGAAG...CCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCCTCTTGTTCTCACACTaGTCAAACAGCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: GQAHNSSLRGHSRTMLSTLLFSH*SNSSFI
Trigger: GATGAAGGAGCTGTTTGATCAGTGTGAGAACAAGAG...GGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTCCTTGGTTACTGCACTaGCTGTTTCCTTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQAPWLLH*LFPSES
Trigger: TGACTCGGAAGGAAACAGTCAGTGCAGTAACCAAGG...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGCCTCTTCTAGAAGCTaGTCGAGGGCATCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQEASSRS*SRASRW
Trigger: CCACCTGGATGCCCTCGATCAGCTTCTAGAAGAGGC...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp ACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACAGGTCCCCACATGCCATCTGGTaGGAGGAGAGGGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: TPDSIWPLQVTQVDKNRSPHAIW*EEREAK
Trigger: TTTGGCCTCCCTCTCCTCTCACCAGATGGCATGTGG...GGACCTGTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGCTTCTAATGAAGCAGTaGAACCTGCTTGCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: HNSSLRGHSRTMLSTRGRLLMKQ*NLLAKD
Trigger: GTCTTTAGCAAGCAGGTTTCACTGCTTCATTAGAAG...CCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCGCTTTATCAGCTGGATaGACACATCATAACAGAGAC +
Preference number: 4 (lower is better)
Translates to: GGGEGISVLSTGIGGSDCALSAG*THHNRD
Trigger: GTCTCTGTTATGATGTGTTCATCCAGCTGATAAAGC...GCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR TCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGAGTGACATCAATGGGTaGAGGCGCCGGGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQESDING*RRREKL
Trigger: CAGCTTCTCCCGGCGCCTTCACCCATTGATGTCACT...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS-3UTR GCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGGCGTCTTTGATCTTTaGTTCTTCTGGCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELGVFDL*FFWQGH
Trigger: ATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCC...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCTAAAGACAGCGAGGGGCAGGGAAGGGATATGACCTCTTCCCATAGTAAGGAACACCTTCTGGATCCGTaGCTCGTCTTCCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: AKDSEGQGRDMTSSHSKEHLLDP*LVFLHH
Trigger: ATGGTGAAGGAAGACGAGGCACGGATCCAGAAGGTG...TTCCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCCCCTCGCTGTCTTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACCTCAACACTTCCTCTAACGTGTaGAGACGCTTGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: QQSWDIQYSHLPRSTDLNTSSNV*RRLVTF
Trigger: GAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGT...GTTGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGGGTGCAGCGCGCTGTTaGCCAACGCCAAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVGAARC*PTPSHG
Trigger: ACCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACC...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGGCATCCAGGTGGTaGAGCGCGCTGTTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: RFQGEDSSLFHAKQEVVSRASRW*SALLPN
Trigger: GTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCT...ACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCCAAAGTGGAAGAGGATaGGGAAGCCGTTTTTATCGT +
Preference number: 4 (lower is better)
Translates to: GQAHNSSLRGHSRTMLSTQSGRG*GSRFYR
Trigger: ACGATAAAAACGGCTTCCGCATCCTCTTCCACTTTG...GGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTGGGGACTTTGCAGTATaGCAGTTCCTTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQAGDFAV*QFLILG
Trigger: GCCCAGAATAAGGAACTGGCATACTGCAAAGTCCCC...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCGGGGACTTTGCAGTATaGCAGTTCCTTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VMRPNSMSCQDVHRTQPAGDFAV*QFLILG
Trigger: GCCCAGAATAAGGAACTGGCATACTGCAAAGTCCCC...GGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGACACAGCCTGCCACTaGCAGGGACAAGCACACAAC +
Preference number: 4 (lower is better)
Translates to: VAGEQLRFLGSTLGHMSSDTACH*QGQAHN
Trigger: GTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC...ACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCAAATTCCATGTCCTaGCAAGATGTCCATAGGACA +
Preference number: 4 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFPNSMS*QDVHRT
Trigger: TGTCCTATGGACATCTTGGCAGGACATGGAATTTGG...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGTCCAGTACAGCCATTTaGCACGAAGCACTGACCTCA +
Preference number: 4 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLSSTAI*HEALTS
Trigger: TGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGA...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: AKVSLYRSRTFSFSGLASVPEGG*NFTFID
Trigger: ATCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...GCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578773.1
CDS-3UTR CCA 90 bp AATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACGTCAGGGCAGTCCTCCTGGCGGTTaGAAGGATTGGTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: NNLGLHFLRHPVPQVRQGSPPGG*KDWWLY
Trigger: ATAAAGCCACCAATCCTTCCAACCGCCAGGAGGACT...GCCCTGACGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577435.5
CDS-3UTR CCA 90 bp AGGATGTGGCTCTTGTGGGGAATGACCCATGACAGTCTCTCTTTAGAGACTCCCTATTCCCAGTCCTCCTaGCGGTTGGAAGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: RMWLLWGMTHDSLSLETPYSQSS*RLEGLV
Trigger: CACCAATCCTTCCAACCGCCAGGAGGACTGGGAATA...GGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp ACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACAGGTCCTCGGACGGCGATCTGTaGCCCTTCCAGCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: TPDSIWPLQVTQVDKNRSSDGDL*PFQLLV
Trigger: AACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGA...GGACCTGTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCGCTTGGCTAAAAGCTTaGACTTCTCCTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: HSLPLPGTSTQLITPWPFAWLKA*TSPHHQ
Trigger: TTGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGC...GAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCTGCTTTTCAGCAGCTTaGCTAAAAGCTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: GGGEGISVLSTGIGGSDCCFSAA*LKAWTS
Trigger: AGAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCA...GCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000584243.5
ENST00000621870.4
CDS-3UTR CCA 90 bp ACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGCTCCTGCAGGTCATCTaGGTTTTTGCTTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TVPLSSWGTVEVSGQHIRLLQVI*VFAFQQ
Trigger: CTGCTGAAAAGCAAAAACCCAGATGACCTGCAGGAG...CCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGGGTGGAGTAGGTGCTaGGGCCAACACGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPGWSRC*GQHGGQ
Trigger: TTGTCCTCCGTGTTGGCCCCAGCACCTACTCCACCC...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTAGGAACATTAGGGGCTaGGTCGGCGAGGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPRNIRG*VGEAQA
Trigger: TGCTTGGGCCTCGCCGACCCAGCCCCTAATGTTCCT...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTCGGACTGTTCCCTCTaGAGCAGGTGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYSDCSL*SRCHWL
Trigger: CAGCCAGTGGCACCTGCTCCAGAGGGAACAGTCCGA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGTGGGGGCAGGAACACTaGCTGGGACCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVWGQEH*LGPQEL
Trigger: CAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCCCCCA...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTTGGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACATTTTGGGGCCAAGGCTaGGGCCACTCCAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: VGPVMRPNSMSCQDVHRTFWGQG*GHSSRK
Trigger: TTTTCTACTGGAGTGGCCCCAGCCTTGGCCCCAAAA...TGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATGGACTGGAAACTCAGTaGCTGGAAGAGCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYGLETQ*LEERAA
Trigger: GGCAGCCCGCTCTTCCAGCCACTGAGTTTCCAGTCC...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTTTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: TQPATARDKHTTHHSVAIFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...AATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAACTGGATGGGGCTAAATaGAGAGAGTTCTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EGQLIPKPHLLLQWIGQQLDGAK*REFCPR
Trigger: TCTGGGACAGAACTCTCTCCATTTAGCCCCATCCAG...TTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTGATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: RVLSQKVAATSLSLTWALMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...CAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPASNMT*VMAAGG
Trigger: GCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGC...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACAGGTCCGATCACAGCGTCCTCTaGGGTCATAGGTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TPDSIWPLQVTQVDKNRSDHSVL*GHRFPH
Trigger: GTGGGGGAACCTATGACCCCAGAGGACGCTGTGATC...GGACCTGTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGATGTGGCTCTTGTGGGGAATGACCCATGACAGTCTCTCTTTAGAGACTCCCTCAGGTGTGAGGATGTaGCTCTTGTGGGGAATGACC +
Preference number: 4 (lower is better)
Translates to: RMWLLWGMTHDSLSLETPSGVRM*LLWGMT
Trigger: GGTCATTCCCCACAAGAGCCACATCCTCACACCTGA...GGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp TGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCGCCAGTTCCTTATTCTaGGCCAGGCACCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CRVAVDSKGRIAVYFMPSASSLF*ARHLPG
Trigger: CCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGC...GCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGAGAAGGGGAAATACTaGCTCTCTTCATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SQGPLRTPDSIWPLQVTQEKGKY*LSSFSF
Trigger: GAAGGAAAATGAAGAGAGCCAGTATTTCCCCTTCTC...CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCGGGAGAGGTTGTCACTGGCTTGCAGGATGTCCCCCAAACTGTTATCATTGTCCTGAGTACCTGCTTCTaGAGAAGGGGAAATACTGGC +
Preference number: 4 (lower is better)
Translates to: PGEVVTGLQDVPQTVIIVLSTCF*RRGNTG
Trigger: GCCAGTATTTCCCCTTCTCCAGAAGCAGGTACTCAG...GACAATGATAACAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp CAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACCTCAACCTGAGTACCTGCTTCTaGAGAAGGGGAAATACTGGC +
Preference number: 4 (lower is better)
Translates to: QQSWDIQYSHLPRSTDLNLSTCF*RRGNTG
Trigger: GCCAGTATTTCCCCTTCTCCAGAAGCAGGTACTCAG...GTTGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAAGCACTGTTGAAGCAATAGGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATTTTGTGACGGAGGCTTaGAGTACATGTCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: PSTVEAIGSGDSAQVWPDFVTEA*STCPRI
Trigger: GATCCTGGGACATGTACTCCAAGCCTCCGTCACAAA...ATCGGGCCACACTTGAGCTGAGTCACCAGACCCTATTGCTTCAACAGTGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATAGGTACGTCAGGGCCTaGAGCGCCTCCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYRYVRA*SASHSC
Trigger: ACAGGAATGGGAGGCGCTCCAGGCCCTGACGTACCT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538886.5
ENST00000578348.5
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTCTTTACCCGCCTGCTTaGGGAATGTCCTCCTACTTG +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVLYPPA*GMSSYL
Trigger: CAAGTAGGAGGACATTCCCCAAGCAGGCGGGTAAAG...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578348.5
CDS-3UTR TCA 90 bp TCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACTGTCAGATTTGGGCTGAGGCTTCCAGCTCCTTGTTaGTCTGATCACAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SSLSQTPCPPGTVRFGLRLPAPC*SDHRSQ
Trigger: TTGGCTTCTGTGATCAGATCAACAAGGAGCTGGAAG...CCTCAGCCCAAATCTGACAGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS-3UTR TCA 90 bp CATGTGGTAGGCGTCTTTGATCTTTGCTTCTTCTGGCAGGGCCATGGTCCAGCTTTCCCCACTTCGTTATaGAATCTCCTCCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: HVVGVFDLCFFWQGHGPAFPTSL*NLLPQF
Trigger: GAACTGTGGGAGGAGATTTCATAACGAAGTGGGGAA...AGCTGGACCATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582376.1
ENST00000621870.4
CDS-3UTR TCA 90 bp AGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGACAGCAGTGTTGGAGAGACGACTTTaGTTAACTCATTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: RKQTPTPSLGVHVPGTAVLERRL*LTHSKS
Trigger: GCTTTTTGAATGAGTTAATCAAAGTCGTCTCTCCAA...CACTGCTGTCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537686.6
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTTGGAGAGACGACTTTaGTTAACTCATTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: QLITPWPFQDDAVHQRQGLERRL*LTHSKS
Trigger: GCTTTTTGAATGAGTTAATCAAAGTCGTCTCTCCAA...GCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTCTGGAAAGGAAGCAGCATCTCACTaGGCAGTCTCACGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: HIVIPQTFPGLQQPVSGKEAASH*AVSRCC
Trigger: ACAACAACGTGAGACTGCTCAGTGAGATGCTGCTTC...CTTTCCAGAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTCCTTGGTTACTGCACTaGCTGTTTCCTTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: PVMRPNSMSCQDVHRTQPPWLLH*LFPSES
Trigger: TGACTCGGAAGGAAACAGTCAGTGCAGTAACCAAGG...AGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCACATGCCATCTGGTaGGAGGAGAGGGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACPHAIW*EEREAK
Trigger: TTTGGCCTCCCTCTCCTCTCACCAGATGGCATGTGG...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTACAGTTCTTCATGCATaGCTCCAGCACCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VAGEQLRFLGSTLGHMSSTVLHA*LQHRQG
Trigger: GCCCTGACGGTGCTGGAGGCATGCATGAAGAACTGT...ACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTAGGCGTCTTTGATCTTTaGTTCTTCTGGCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QQLNNLGLHFLRHPVPQVGVFDL*FFWQGH
Trigger: ATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCC...TACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000582376.1
ENST00000621870.4
CDS-3UTR GCA 90 bp GCTGTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCGGCGTCTTTGATCTTTaGTTCTTCTGGCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: AVQQLNNLGLHFLRHPVPGVFDL*FFWQGH
Trigger: ATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCC...GGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000582376.1
ENST00000621870.4
CDS-3UTR GCA 90 bp GTCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATGCCTGAAAGGGGACATGGCGTCTTTGATCTTTaGTTCTTCTGGCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VLSTGIGGSDCTMPERGHGVFDL*FFWQGH
Trigger: ATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCC...ATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR GCA 90 bp CCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGATTGGTGGGTCAGACTaGACTATGCCCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PSVAGEQLRFLGSTLGHMIGGSD*TMPCLF
Trigger: GAAGAGACAGGGCATAGTGCAGTCTGACCCACCAAT...CATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp ATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAACATGACCTGGGTGGTCATCTGGGTTTTTaGTTTTCAGCAGCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: IPKPHLLLQWIGQQHDLGGHLGF*FSAAWL
Trigger: TAGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACC...ACCCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACCACCTTCTGGATCCGTaGCTCGTCTTCCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHHLLDP*LVFLHH
Trigger: ATGGTGAAGGAAGACGAGGCACGGATCCAGAAGGTG...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TTCCATTTCCACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCAGGTTGTCACTGGCTTaGAGGATGTCCCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: FHFHIVIPQTFPGLQQPVRLSLA*RMSPKL
Trigger: CAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCT...GACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTGGAAATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp ACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGTCGCCATTGATGACCTaGCCTTCAATAATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: TTHHSVAIPGRCCPPEAGSPLMT*PSIIVL
Trigger: CAAAACAATTATTGAAGGGCAGGTCATCAATGGCGA...CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACTCGCCATTGATGACCTaGCCTTCAATAATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GSGDSAQVWPDLITSRPNSPLMT*PSIIVL
Trigger: CAAAACAATTATTGAAGGGCAGGTCATCAATGGCGA...GTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAACAAAGTGGAAGAGGATaGGGAAGCCGTTTTTATCGT +
Preference number: 4 (lower is better)
Translates to: GLEYMSQDHIQQLEWLGQQSGRG*GSRFYR
Trigger: ACGATAAAAACGGCTTCCGCATCCTCTTCCACTTTG...TTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGCCAAATTCCATGTCCTaGCAAGATGTCCATAGGACA +
Preference number: 4 (lower is better)
Translates to: QIPCPAKMSIGHSLPLPGPNSMS*QDVHRT
Trigger: TGTCCTATGGACATCTTGGCAGGACATGGAATTTGG...CCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTTTAGAAAGCTGAGTACCTaGTTCTGGAGAAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LFTWAPQASPVSMAAGDFRKLST*FWRRGN
Trigger: ATTTCCCCTTCTCCAGAAGCAGGTACTCAGCTTTCT...AAAATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGAGAAAGCTGAGTACCTaGTTCTGGAGAAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: KHTTHHSVAIPGRCCPPERKLST*FWRRGN
Trigger: ATTTCCCCTTCTCCAGAAGCAGGTACTCAGCTTTCT...CTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GCTGTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCTCCAGTACAGCCATTTaGCACGAAGCACTGACCTCA +
Preference number: 4 (lower is better)
Translates to: AVQQLNNLGLHFLRHPVPSSTAI*HEALTS
Trigger: TGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGA...GGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp TTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACTGTCAGATTTGGGCTAGTCCTCCTGGCGGTTaGAAGGATTGGTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: LVFTFSDTLSPRYCQIWASPPGG*KDWWLY
Trigger: ATAAAGCCACCAATCCTTCCAACCGCCAGGAGGACT...AGCCCAAATCTGACAGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS-3UTR CCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTTCGGACGGCGATCTGTaGCCCTTCCAGCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACSDGDL*PFQLLV
Trigger: AACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGA...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTATCCACAGGAATTaGTGGGTCAGACTGCACTAT +
Preference number: 4 (lower is better)
Translates to: GPVMRPNSMSCQDVHRTQPIHRN*WVRLHY
Trigger: ATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGG...CTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGCCTATCCACAGGAATTaGTGGGTCAGACTGCACTAT +
Preference number: 4 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLPIHRN*WVRLHY
Trigger: ATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGG...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCTGCTTTTCAGCAGCTTaGCTAAAAGCTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: PGTSTQLITPWPFQDDAVCFSAA*LKAWTS
Trigger: AGAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCA...GACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTTGCTTTTCAGCAGCTTaGCTAAAAGCTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFCFSAA*LKAWTS
Trigger: AGAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCA...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTGCAACTTCACTTTCATTGACTTGGGCACTGCAGCCTGCAGCACGATGCTCTCTCCTGCAGGTCATCTaGGTTTTTGCTTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AATSLSLTWALQPAARCSLLQVI*VFAFQQ
Trigger: CTGCTGAAAAGCAAAAACCCAGATGACCTGCAGGAG...AGAGCATCGTGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATCGCTTGGTCACCTTCTaGATCCGTGCCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYRLVTF*IRASSS
Trigger: GGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCG...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGGGGTGGAGTAGGTGCTaGGGCCAACACGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVGWSRC*GQHGGQ
Trigger: TTGTCCTCCGTGTTGGCCCCAGCACCTACTCCACCC...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTAGCCCGAGGTCACTTTaGCCTCTTCTAGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVSPRSL*PLLEAD
Trigger: ATCAGCTTCTAGAAGAGGCCAAAGTGACCTCGGGCT...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTTGGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACAAGCCCGAGGTCACTTTaGCCTCTTCTAGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VGPVMRPNSMSCQDVHRTSPRSL*PLLEAD
Trigger: ATCAGCTTCTAGAAGAGGCCAAAGTGACCTCGGGCT...TGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTCACTTTCATTGACTTaGGCACTGCAGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVSLSLT*ALQPAA
Trigger: TGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGA...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCAACATGACCTGGGTTTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: IPKPHLLLQWIGQQHDLGFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...ACCCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGACCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTTTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: RPNISLTVPLSSWGTVEVFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...AACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: VAGEQLRFLGSTLGHMSSMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...ACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GATCACAGAAGCCAATTATGTATTCCCAGTCCTCCTGGCGGTTGGAAGGATTGGTCAGGTGTGAGGATGTaGCTCTTGTGGGGAATGACC +
Preference number: 4 (lower is better)
Translates to: DHRSQLCIPSPPGGWKDWSGVRM*LLWGMT
Trigger: GGTCATTCCCCACAAGAGCCACATCCTCACACCTGA...CCAATCCTTCCAACCGCCAGGAGGACTGGGAATACATAATTGGCTTCTGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp CCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PVMRPNSMSCQDVHRTQPLPIPS*ACHEAK
Trigger: TTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAG...AGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGAGAAGGGGAAATACTaGCTCTCTTCATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TQLITPWPFQDDAVHQRQEKGKY*LSSFSF
Trigger: GAAGGAAAATGAAGAGAGCCAGTATTTCCCCTTCTC...CTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGACCCAACATCTCGCTGACAGTGCCCCTCAGTAGCTGGGGAACAGTTGAGGTTGCAGCAGCCAGTCTCTaGAAAGCTCTTGGATTTATT +
Preference number: 4 (lower is better)
Translates to: RPNISLTVPLSSWGTVEVAAASL*KALGFI
Trigger: AATAAATCCAAGAGCTTTCCAGAGACTGGCTGCTGC...AACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGAGATGTTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CAA 72 bp ACGTTGTTGTTAACTTCCTCTAACGTGTGCAGACGCTaGGTCACCTTCTGGATCCGTGCCTCGTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TLLLTSSNVCRR*VTFWIRASSSF
Trigger: GAAGGAAGACGAGGCACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGTTAACAACAACGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp GTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGCTTCCAGCTCCTTGTTaGTCTGATCACAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: VQQLNNLGLHFLRHPVPQLPAPC*SDHRSQ
Trigger: TTGGCTTCTGTGATCAGATCAACAAGGAGCTGGAAG...CTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000582376.1
ENST00000621870.4
CDS-3UTR TCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTCTTCCAGCTCCTTGTTaGTCTGATCACAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVLPAPC*SDHRSQ
Trigger: TTGGCTTCTGTGATCAGATCAACAAGGAGCTGGAAG...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp ATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATGCCTGAAAGGTTCCCCACTTCGTTATaGAATCTCCTCCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: ISVLSTGIGGSDCTMPERFPTSL*NLLPQF
Trigger: GAACTGTGGGAGGAGATTTCATAACGAAGTGGGGAA...CCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR TCA 90 bp GCTGTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCTGTGGTAGGCGTCTTTaGTCTTTGCTTCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: AVQQLNNLGLHFLRHPVPCGRRL*SLLLLA
Trigger: TGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACA...GGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000582376.1
ENST00000621870.4
CDS-3UTR TCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACCCTTGGTTACTGCACTaGCTGTTTCCTTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHPWLLH*LFPSES
Trigger: TGACTCGGAAGGAAACAGTCAGTGCAGTAACCAAGG...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGGCAGCACGATGCTCTTaGCAGGTAAGGGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVAARCS*QVREPC
Trigger: ACACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGC...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGCCACATGCCATCTGGTaGGAGGAGAGGGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVPHAIW*EEREAK
Trigger: TTTGGCCTCCCTCTCCTCTCACCAGATGGCATGTGG...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CTCCTTCATCAGCTCTCTGTCCCCGTCCGAAGAGTCCTCCTGGCTGTAATGAAGCTTCTAATGAAGCAGTaGAACCTGCTTGCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: LLHQLSVPVRRVLLAVMKLLMKQ*NLLAKD
Trigger: GTCTTTAGCAAGCAGGTTTCACTGCTTCATTAGAAG...CTTCATTACAGCCAGGAGGACTCTTCGGACGGGGACAGAGAGCTGATGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp AATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACCTTCTAATGAAGCAGTaGAACCTGCTTGCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: NSMSCQDVHRTQPATARDLLMKQ*NLLAKD
Trigger: GTCTTTAGCAAGCAGGTTTCACTGCTTCATTAGAAG...GTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTGGGCGTCTTTGATCTTTaGTTCTTCTGGCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RVLSQKVAATSLSLTWALGVFDL*FFWQGH
Trigger: ATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCC...CAGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp CCAAGCACTGTTGAAGCAATAGGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATGGTCATCTGGGTTTTTaGTTTTCAGCAGCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: PSTVEAIGSGDSAQVWPDGHLGF*FSAAWL
Trigger: TAGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACC...ATCGGGCCACACTTGAGCTGAGTCACCAGACCCTATTGCTTCAACAGTGCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCGGTCATCTGGGTTTTTaGTTTTCAGCAGCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: VMRPNSMSCQDVHRTQPAGHLGF*FSAAWL
Trigger: TAGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACC...GGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTGGTCATCTGGGTTTTTaGTTTTCAGCAGCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQAGHLGF*FSAAWL
Trigger: TAGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACC...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGCACCTTCTGGATCCGTaGCTCGTCTTCCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQEHLLDP*LVFLHH
Trigger: ATGGTGAAGGAAGACGAGGCACGGATCCAGAAGGTG...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATAGACATTCCCAGGGCTaGAGCAGCCAGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYRHSQG*SSQSLE
Trigger: TTCCAGAGACTGGCTGCTGCAGCCCTGGGAATGTCT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTAGACATTCCCAGGGCTaGAGCAGCCAGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACRHSQG*SSQSLE
Trigger: TTCCAGAGACTGGCTGCTGCAGCCCTGGGAATGTCT...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGTATTCCCAGTCCTCCTaGCGGTTGGAAGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQEYSQSS*RLEGLV
Trigger: CACCAATCCTTCCAACCGCCAGGAGGACTGGGAATA...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACTGTCAGATTTATTCCCAGTCCTCCTaGCGGTTGGAAGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: ITLVFTFSDTLSPRYCQIYSQSS*RLEGLV
Trigger: CACCAATCCTTCCAACCGCCAGGAGGACTGGGAATA...AATCTGACAGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS-3UTR CCA 90 bp AAGCTTGGACTTCTCCTCATCATCAAAAACAGGGTTTTTGGGACGAGGTGGTGGTATTCCCAGTCCTCCTaGCGGTTGGAAGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: KLGLLLIIKNRVFGTRWWYSQSS*RLEGLV
Trigger: CACCAATCCTTCCAACCGCCAGGAGGACTGGGAATA...CCACCACCTCGTCCCAAAAACCCTGTTTTTGATGATGAGGAGAAGTCCAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000584243.5
ENST00000621870.4
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGTCGGACGGCGATCTGTaGCCCTTCCAGCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVSDGDL*PFQLLV
Trigger: AACAAGGAGCTGGAAGGGCCACAGATCGCCGTCCGA...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGTTTGGGACGAGGTGGTaGAGAGGGGATCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVFGTRW*RGDQRP
Trigger: AGGACGCTGATCCCCTCTCCACCACCTCGTCCCAAA...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAATGCTTTTCAGCAGCTTaGCTAAAAGCTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: GLEYMSQDHIQQLEWLGQCFSAA*LKAWTS
Trigger: AGAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCA...TTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTCTCCTGCAGGTCATCTaGGTTTTTGCTTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVLLQVI*VFAFQQ
Trigger: CTGCTGAAAAGCAAAAACCCAGATGACCTGCAGGAG...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGGGGAGAGGTTGTCACTaGCTTGCAGGATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVGRGCH*LAGCPP
Trigger: TGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCC...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGGGCAGGAACACTGGCTaGGACCACAGGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QLRFLGSTLGHMSSVTFVGRNTG*DHRSWE
Trigger: TTCCCAGCTCCTGTGGTCCCAGCCAGTGTTCCTGCC...CACAAATGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGTTTTGGGGCCAAGGCTaGGGCCACTCCAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQEFWGQG*GHSSRK
Trigger: TTTTCTACTGGAGTGGCCCCAGCCTTGGCCCCAAAA...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCAGCTGTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCAGCCCGAGGTCACTTTaGCCTCTTCTAGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: PAVQQLNNLGLHFLRHPVSPRSL*PLLEAD
Trigger: ATCAGCTTCTAGAAGAGGCCAAAGTGACCTCGGGCT...GACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTACAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCTGGGGGACACTCCTTaGCAAAGTGGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACLGDTP*QSGRGC
Trigger: GCATCCTCTTCCACTTTGCCAAGGAGTGTCCCCCAG...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGCACGTCAGGTCGTCCTaGGGGACACTCCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVHVRSS*GTLLGK
Trigger: TTTGCCAAGGAGTGTCCCCCAGGACGACCTGACGTG...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACTCACTTTCATTGACTTaGGCACTGCAGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHSLSLT*ALQPAA
Trigger: TGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGA...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGGGTGATGGCTGCAGGTaGCTGGATGGGGCTAAATGG +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVGDGCR*LDGAKW
Trigger: CCATTTAGCCCCATCCAGCCACCTGCAGCCATCACC...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTGATCACAGCGTCCTCTaGGGTCATAGGTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RFQGEDSSLFHAKQEVVSDHSVL*GHRFPH
Trigger: GTGGGGGAACCTATGACCCCAGAGGACGCTGTGATC...ACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTACTGTTGTCAGGGCATaGAGAGTGACGGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPTVVRA*RVTGPE
Trigger: CTCTGGTCCCGTCACTCTCCATGCCCTGACAACAGT...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCATTTCCACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTCATCACAGCAGCAGTTTaGTTCTCAGCAGAAATGCCC +
Preference number: 4 (lower is better)
Translates to: PFPHSNSTDIPRAAAASLITAAV*FSAEMP
Trigger: GGGCATTTCTGCTGAGAACCAAACTGCTGCTGTGAT...GAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTGGAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGTCAGGTGTGAGGATGTaGCTCTTGTGGGGAATGACC +
Preference number: 4 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQESGVRM*LLWGMT
Trigger: GGTCATTCCCCACAAGAGCCACATCCTCACACCTGA...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTTTGGCGGGGGAAGCATaGAATTGCAACAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPLAGEA*NCNRAA
Trigger: TGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAA...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACAGGAACCAGGGAACATaGTCTGTGCCACCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHRNQGT*SVPPSF
Trigger: AAAGGAAGGTGGCACAGACCATGTTCCCTGGTTCCT...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACTGTGGTAGGCGTCTTTaGTCTTTGCTTCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LRTPDSIWPLQVTQVDKNCGRRL*SLLLLA
Trigger: TGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACA...GTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACTGTGGTAGGCGTCTTTaGTCTTTGCTTCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHCGRRL*SLLLLA
Trigger: TGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACA...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTCTCTTGTTCTCACACTaGTCAAACAGCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVLLFSH*SNSSFI
Trigger: GATGAAGGAGCTGTTTGATCAGTGTGAGAACAAGAG...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp ACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACAGGTCCGTGGGGAATGACCCATaGCAGTCTCTCTTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: TPDSIWPLQVTQVDKNRSVGNDP*QSLFRD
Trigger: GTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCAC...GGACCTGTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp CAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCTTCTAATGAAGCAGTaGAACCTGCTTGCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: QDVHRTQPATARDKHTTHLLMKQ*NLLAKD
Trigger: GTCTTTAGCAAGCAGGTTTCACTGCTTCATTAGAAG...ATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp CCGGGAGAGGTTGTCACTGGCTTGCAGGATGTCCCCCAAACTGTTATCATTGTCCTTCTAATGAAGCAGTaGAACCTGCTTGCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: PGEVVTGLQDVPQTVIIVLLMKQ*NLLAKD
Trigger: GTCTTTAGCAAGCAGGTTTCACTGCTTCATTAGAAG...GACAATGATAACAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTCACCTTCTGGATCCGTaGCTCGTCTTCCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPHLLDP*LVFLHH
Trigger: ATGGTGAAGGAAGACGAGGCACGGATCCAGAAGGTG...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGCGTGCCTTGGTTACTaGACTGACTGTTTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPACLGY*TDCFLP
Trigger: CGGAAGGAAACAGTCAGTGCAGTAACCAAGGCACGC...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTGCGTGCCTTGGTTACTaGACTGACTGTTTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACACLGY*TDCFLP
Trigger: CGGAAGGAAACAGTCAGTGCAGTAACCAAGGCACGC...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GTTGGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAAAGTGGAAGAGGATaGGGAAGCCGTTTTTATCGT +
Preference number: 4 (lower is better)
Translates to: VGPVMRPNSMSCQDVHRTQSGRG*GSRFYR
Trigger: ACGATAAAAACGGCTTCCGCATCCTCTTCCACTTTG...TGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGTTGGGCACTGCAGCCTaGAGCACGATGCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVLGTAA*STMLLT
Trigger: TGTCAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAA...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AAGCTTGGACTTCTCCTCATCATCAAAAACAGGGTTTTTGGGACGAGGTGGTGGGGGGACTTTGCAGTATaGCAGTTCCTTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KLGLLLIIKNRVFGTRWWGDFAV*QFLILG
Trigger: GCCCAGAATAAGGAACTGGCATACTGCAAAGTCCCC...CCACCACCTCGTCCCAAAAACCCTGTTTTTGATGATGAGGAGAAGTCCAAGCTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR GCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATGAGACTTTACCCGCCTaGTTGGGGAATGTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYETLPA*LGNVLL
Trigger: TAGGAGGACATTCCCCAAGCAGGCGGGTAAAGTCTC...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578348.5
CDS-3UTR GCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTGAGACTTTACCCGCCTaGTTGGGGAATGTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACETLPA*LGNVLL
Trigger: TAGGAGGACATTCCCCAAGCAGGCGGGTAAAGTCTC...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582486.5
CDS-3UTR CCA 90 bp GATCACAGAAGCCAATTATGTATTCCCAGTCCTCCTGGCGGTTGGAAGGATTGGCCTATCCACAGGAATTaGTGGGTCAGACTGCACTAT +
Preference number: 4 (lower is better)
Translates to: DHRSQLCIPSPPGGWKDWPIHRN*WVRLHY
Trigger: ATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGG...CCAATCCTTCCAACCGCCAGGAGGACTGGGAATACATAATTGGCTTCTGTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp GGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGGCTTGGCTAAAAGCTTaGACTTCTCCTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: GPVMRPNSMSCQDVHRTQAWLKA*TSPHHQ
Trigger: TTGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGC...CTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGCGGAGGACAAACTGTTaGTCGTGTCCAGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVRRTNC*SCPAPQ
Trigger: TTGCGGAGCTGGACACGACCAACAGTTTGTCCTCCG...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTTTTTGGGGCCAAGGCTaGGGCCACTCCAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPFWGQG*GHSSRK
Trigger: TTTTCTACTGGAGTGGCCCCAGCCTTGGCCCCAAAA...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCTGGATGGGGCTAAATaGAGAGAGTTCTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: DSSLFHAKQEVVSRMACPLDGAK*REFCPR
Trigger: TCTGGGACAGAACTCTCTCCATTTAGCCCCATCCAG...GGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCCTGGATGGGGCTAAATaGAGAGAGTTCTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFLDGAK*REFCPR
Trigger: TCTGGGACAGAACTCTCTCCATTTAGCCCCATCCAG...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: RFQGEDSSLFHAKQEVVSMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...ACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp ACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACAGGTCCCACCTTCTCCTTCAGTaGATTGGCCAGCAACATGAC +
Preference number: 4 (lower is better)
Translates to: TPDSIWPLQVTQVDKNRSHLLLQ*IGQQHD
Trigger: GTCATGTTGCTGGCCAATCCACTGAAGGAGAAGGTG...GGACCTGTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGTGCCTGGCTTCAAGGTaGAGATCACAGCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVCLASR*RSQRPL
Trigger: CAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCA...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCACCCCTGACAGCATATaGCCACTTCAAGTCACACAG +
Preference number: 4 (lower is better)
Translates to: CRVAVDSKGRIAVYFMPSTPDSI*PLQVTQ
Trigger: CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT...GCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGCTGAGTACCTGCTTCTaGAGAAGGGGAAATACTGGC +
Preference number: 4 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQELSTCF*RRGNTG
Trigger: GCCAGTATTTCCCCTTCTCCAGAAGCAGGTACTCAG...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTGACTCAGCTCAAGTGTaGCCCGATCTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: RFQGEDSSLFHAKQEVVSDSAQV*PDLITS
Trigger: GGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTC...ACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTAGGAACCAGGGAACATaGTCTGTGCCACCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VAGEQLRFLGSTLGHMSSRNQGT*SVPPSF
Trigger: AAAGGAAGGTGGCACAGACCATGTTCCCTGGTTCCT...ACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGACGAGGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCATCTCTGGAAAGCTCTTaGATTTATTCCTTAAGTAGT +
Preference number: 4 (lower is better)
Translates to: GRGGGEGISVLSTGIGGSSLESS*IYSLSS
Trigger: ACTACTTAAGGAATAAATCCAAGAGCTTTCCAGAGA...TGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACCTCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CCA 90 bp GATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTTCTCTGGAAAGCTCTTaGATTTATTCCTTAAGTAGT +
Preference number: 4 (lower is better)
Translates to: DVRLLSLFTWAPQASPVSSLESS*IYSLSS
Trigger: ACTACTTAAGGAATAAATCCAAGAGCTTTCCAGAGA...AGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTGTACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCGGTTGGAAGGATTGGTaGCTTTATCAGCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: AVQQLNNLGLHFLRHPVPGWKDW*LYQLDE
Trigger: TTCATCCAGCTGATAAAGCCACCAATCCTTCCAACC...GGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577435.5
ENST00000621870.4
CDS-3UTR CCA 90 bp AATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACTGTCAGATAGGTACTGTCAGATTTaGGCTGAGGGCGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: NNLGLHFLRHPVPQVLSDRYCQI*AEGASE
Trigger: TTCTGAAGCGCCCTCAGCCCAAATCTGACAGTACCT...ATCTGACAGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS-3UTR TCA 90 bp TACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGAGCTCCTTGTTGATCTaGTCACAGAAGCCAATTATG +
Preference number: 4 (lower is better)
Translates to: YSSSITLVFTFSDTLSPRSSLLI*SQKPIM
Trigger: CATAATTGGCTTCTGTGATCAGATCAACAAGGAGCT...CCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000582376.1
ENST00000621870.4
CDS-3UTR TCA 90 bp TTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACTGTCAGATTTGGGCTAGCTCCTTGTTGATCTaGTCACAGAAGCCAATTATG +
Preference number: 4 (lower is better)
Translates to: LVFTFSDTLSPRYCQIWASSLLI*SQKPIM
Trigger: CATAATTGGCTTCTGTGATCAGATCAACAAGGAGCT...AGCCCAAATCTGACAGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS-3UTR TCA 90 bp TGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCCTTCCAGCTCCTTGTTaGTCTGATCACAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: CRVAVDSKGRIAVYFMPSLPAPC*SDHRSQ
Trigger: TTGGCTTCTGTGATCAGATCAACAAGGAGCTGGAAG...GCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGCTTCCAGCTCCTTGTTaGTCTGATCACAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQELPAPC*SDHRSQ
Trigger: TTGGCTTCTGTGATCAGATCAACAAGGAGCTGGAAG...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCCTTCCAGCTCCTTGTTaGTCTGATCACAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFLPAPC*SDHRSQ
Trigger: TTGGCTTCTGTGATCAGATCAACAAGGAGCTGGAAG...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGTTGGAGAGACGACTTTaGTTAACTCATTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: KHTTHHSVAIPGRCCPPELERRL*LTHSKS
Trigger: GCTTTTTGAATGAGTTAATCAAAGTCGTCTCTCCAA...CTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATGAAGCAGCATCTCACTaGGCAGTCTCACGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYEAASH*AVSRCC
Trigger: ACAACAACGTGAGACTGCTCAGTGAGATGCTGCTTC...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACCTCTTGTTCTCACACTaGTCAAACAGCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHLLFSH*SNSSFI
Trigger: GATGAAGGAGCTGTTTGATCAGTGTGAGAACAAGAG...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACGTCGCTTTATCAGCTGGATaGACACATCATAACAGAGAC +
Preference number: 4 (lower is better)
Translates to: SSITLVFTFSDTLSPRYVALSAG*THHNRD
Trigger: GTCTCTGTTATGATGTGTTCATCCAGCTGATAAAGC...GACGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577435.5
CDS-3UTR TCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACTTTATCGTTAGCACTTaGCCAGGAGGAGACTTTACC +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHFIVST*PGGDFT
Trigger: GGTAAAGTCTCCTCCTGGTCAAGTGCTAACGATAAA...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582486.5
CDS-3UTR GCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGGCGTCTTTGATCTTTaGTTCTTCTGGCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPGVFDL*FFWQGH
Trigger: ATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCC...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATGGCGTCTTTGATCTTTaGTTCTTCTGGCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYGVFDL*FFWQGH
Trigger: ATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCC...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGAGGTTGTCACTGGCTTaGAGGATGTCCCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVRLSLA*RMSPKL
Trigger: CAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCT...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GAGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTCAAAGTGGAAGAGGATaGGGAAGCCGTTTTTATCGT +
Preference number: 4 (lower is better)
Translates to: ESSVPEGGCNFTFIDLGTQSGRG*GSRFYR
Trigger: ACGATAAAAACGGCTTCCGCATCCTCTTCCACTTTG...AGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATCAGGGCTGGGGACTTTaGAGTATGCCAGTTCCTTAT +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYQGWGL*SMPVPY
Trigger: ATAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTG...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACCCAAATTCCATGTCCTaGCAAGATGTCCATAGGACA +
Preference number: 4 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHPNSMS*QDVHRT
Trigger: TGTCCTATGGACATCTTGGCAGGACATGGAATTTGG...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTTCCAGTACAGCCATTTaGCACGAAGCACTGACCTCA +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPSSTAI*HEALTS
Trigger: TGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGA...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGTATTCCCAGTCCTCCTaGCGGTTGGAAGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVYSQSS*RLEGLV
Trigger: CACCAATCCTTCCAACCGCCAGGAGGACTGGGAATA...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTATCCACAGGAATTGGTaGGTCAGACTGCACTATGCC +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACIHRNW*VRLHYA
Trigger: GGCATAGTGCAGTCTGACCCACCAATTCCTGTGGAT...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATATCCACAGGAATTGGTaGGTCAGACTGCACTATGCC +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYIHRNW*VRLHYA
Trigger: GGCATAGTGCAGTCTGACCCACCAATTCCTGTGGAT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTCTGGAAAGGCTTGGCTAAAAGCTTaGACTTCTCCTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: HIVIPQTFPGLQQPVSGKAWLKA*TSPHHQ
Trigger: TTGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGC...CTTTCCAGAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTGCTTTTCAGCAGCTTaGCTAAAAGCTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVCFSAA*LKAWTS
Trigger: AGAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCA...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTAGCCCGAGGTCACTTTaGCCTCTTCTAGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACSPRSL*PLLEAD
Trigger: ATCAGCTTCTAGAAGAGGCCAAAGTGACCTCGGGCT...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTCTGGATGGGGCTAAATaGAGAGAGTTCTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPLDGAK*REFCPR
Trigger: TCTGGGACAGAACTCTCTCCATTTAGCCCCATCCAG...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATGGCTGCAGGTGGCTaGATGGGGCTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: QLRFLGSTLGHMSSVTFVMAAGG*MGLNGE
Trigger: CTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCAT...CACAAATGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATACCCCTGACAGCATATaGCCACTTCAAGTCACACAG +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYTPDSI*PLQVTQ
Trigger: CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPLPIPS*ACHEAK
Trigger: TTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAG...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCTTCCTATCCCTAGTTaGGCCTGTCATGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACLPIPS*ACHEAK
Trigger: TTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAG...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGAGAAGGGGAAATACTaGCTCTCTTCATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PVMRPNSMSCQDVHRTQPEKGKY*LSSFSF
Trigger: GAAGGAAAATGAAGAGAGCCAGTATTTCCCCTTCTC...AGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TCCGCCTCTTGTTCTCACACTGATCAAACAGCTCCTTCATCAGCTCTCTGTCCCGAGAAGGGGAAATACTaGCTCTCTTCATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SASCSHTDQTAPSSALCPEKGKY*LSSFSF
Trigger: GAAGGAAAATGAAGAGAGCCAGTATTTCCCCTTCTC...GGGACAGAGAGCTGATGAAGGAGCTGTTTGATCAGTGTGAGAACAAGAGGCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCTGAGTACCTGCTTCTaGAGAAGGGGAAATACTGGC +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACLSTCF*RRGNTG
Trigger: GCCAGTATTTCCCCTTCTCCAGAAGCAGGTACTCAG...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTCTGAGTACCTGCTTCTaGAGAAGGGGAAATACTGGC +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPLSTCF*RRGNTG
Trigger: GCCAGTATTTCCCCTTCTCCAGAAGCAGGTACTCAG...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATAGGAACCAGGGAACATaGTCTGTGCCACCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYRNQGT*SVPPSF
Trigger: AAAGGAAGGTGGCACAGACCATGTTCCCTGGTTCCT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCAAACAGGTCCTTCAGTaGATTGGCCAGCAACATGAC +
Preference number: 4 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFKQVLQ*IGQQHD
Trigger: GTCATGTTGCTGGCCAATCCACTGAAGGACCTGTTT...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580646.5
CDS-3UTR TCA 90 bp CATGTGGTAGGCGTCTTTGATCTTTGCTTCTTCTGGCAGGGCCATGGTCCAGCTTTGGAGAGACGACTTTaGTTAACTCATTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: HVVGVFDLCFFWQGHGPALERRL*LTHSKS
Trigger: GCTTTTTGAATGAGTTAATCAAAGTCGTCTCTCCAA...AGCTGGACCATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582376.1
ENST00000621870.4
CDS-3UTR TCA 90 bp GGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATGCCTGAATTGGAGAGACGACTTTaGTTAACTCATTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: GISVLSTGIGGSDCTMPELERRL*LTHSKS
Trigger: GCTTTTTGAATGAGTTAATCAAAGTCGTCTCTCCAA...TTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR TCA 90 bp CAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATTTGGAGAGACGACTTTaGTTAACTCATTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: QDVHRTQPATARDKHTTHLERRL*LTHSKS
Trigger: GCTTTTTGAATGAGTTAATCAAAGTCGTCTCTCCAA...ATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATGTGGTAGGCGTCTTTaGTCTTTGCTTCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GEQLRFLGSTLGHMSSVTCGRRL*SLLLLA
Trigger: TGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACA...TGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTGTGGTAGGCGTCTTTaGTCTTTGCTTCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYCGRRL*SLLLLA
Trigger: TGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTTGTGGTAGGCGTCTTTaGTCTTTGCTTCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACCGRRL*SLLLLA
Trigger: TGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACA...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGCCTTGGTTACTGCACTaGCTGTTTCCTTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVPWLLH*LFPSES
Trigger: TGACTCGGAAGGAAACAGTCAGTGCAGTAACCAAGG...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGATTGGTGGGTCAGACTaGACTATGCCCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVIGGSD*TMPCLF
Trigger: GAAGAGACAGGGCATAGTGCAGTCTGACCCACCAAT...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGACTTCCTCTAACGTGTaGAGACGCTTGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVTSSNV*RRLVTF
Trigger: GAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGT...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp ACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACAGGTCCCAAAGTGGAAGAGGATaGGGAAGCCGTTTTTATCGT +
Preference number: 4 (lower is better)
Translates to: TPDSIWPLQVTQVDKNRSQSGRG*GSRFYR
Trigger: ACGATAAAAACGGCTTCCGCATCCTCTTCCACTTTG...GGACCTGTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPVPEGG*NFTFID
Trigger: GTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACVPEGG*NFTFID
Trigger: GTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGAC...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGGGGGACTTTGCAGTATaGCAGTTCCTTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVGDFAV*QFLILG
Trigger: GCCCAGAATAAGGAACTGGCATACTGCAAAGTCCCC...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCAGAAAGCTGAGTACCTaGTTCTGGAGAAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: DSSLFHAKQEVVSRMACPRKLST*FWRRGN
Trigger: ATTTCCCCTTCTCCAGAAGCAGGTACTCAGCTTTCT...GGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp ACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACAGGTCCAGAAAGCTGAGTACCTaGTTCTGGAGAAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: TPDSIWPLQVTQVDKNRSRKLST*FWRRGN
Trigger: ATTTCCCCTTCTCCAGAAGCAGGTACTCAGCTTTCT...GGACCTGTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGAGTCCTCCTGGCGGTTaGAAGGATTGGTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVSPPGG*KDWWLY
Trigger: ATAAAGCCACCAATCCTTCCAACCGCCAGGAGGACT...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTCCTATCCACAGGAATTaGTGGGTCAGACTGCACTAT +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPPIHRN*WVRLHY
Trigger: ATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGG...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp TTCCATTTCCACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTGCTTTTCAGCAGCTTaGCTAAAAGCTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: FHFHIVIPQTFPGLQQPVCFSAA*LKAWTS
Trigger: AGAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCA...GACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTGGAAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCTCCTGCAGGTCATCTaGGTTTTTGCTTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACLLQVI*VFAFQQ
Trigger: CTGCTGAAAAGCAAAAACCCAGATGACCTGCAGGAG...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTTCACTTTCATTGACTTaGGCACTGCAGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RFQGEDSSLFHAKQEVVSSLSLT*ALQPAA
Trigger: TGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGA...ACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCTTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGTGTGGTAGGCGTCTTTaGTCTTTGCTTCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVCGRRL*SLLLLA
Trigger: TGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACA...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTTATCGTTAGCACTTaGCCAGGAGGAGACTTTACC +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYFIVST*PGGDFT
Trigger: GGTAAAGTCTCCTCCTGGTCAAGTGCTAACGATAAA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578348.5
CDS-3UTR GCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATGGTCATCTGGGTTTTTaGTTTTCAGCAGCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYGHLGF*FSAAWL
Trigger: TAGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACC...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp CAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGACTTCCTCTAACGTGTaGAGACGCTTGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: QLRFLGSTLGHMSSVTFVTSSNV*RRLVTF
Trigger: GAAGGTGACCAAGCGTCTGCACACGTTAGAGGAAGT...CACAAATGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGAGAAAGCTGAGTACCTaGTTCTTCAGTGGATTGGCC +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVRKLST*FFSGLA
Trigger: GGCCAATCCACTGAAGAAGCAGGTACTCAGCTTTCT...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578348.5
CDS-3UTR CCA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCGCTTGGCTAAAAGCTTaGACTTCTCCTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFAWLKA*TSPHHQ
Trigger: TTGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGC...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCGCTTGGCTAAAAGCTTaGACTTCTCCTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: DSSLFHAKQEVVSRMACPAWLKA*TSPHHQ
Trigger: TTGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGC...GGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AAGCTTGGACTTCTCCTCATCATCAAAAACAGGGTTTTTGGGACGAGGTGGTGGGCTTGGCTAAAAGCTTaGACTTCTCCTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: KLGLLLIIKNRVFGTRWWAWLKA*TSPHHQ
Trigger: TTGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGC...CCACCACCTCGTCCCAAAAACCCTGTTTTTGATGATGAGGAGAAGTCCAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000584243.5
ENST00000621870.4
CDS-3UTR CCA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTTTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTTCTCTGGAAAGCTCTTaGATTTATTCCTTAAGTAGT +
Preference number: 4 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELSLESS*IYSLSS
Trigger: ACTACTTAAGGAATAAATCCAAGAGCTTTCCAGAGA...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
3UTR CAA 72 bp TCACTGGCTTGCAGGATGTCCCCCAAACTGTTATCATaGTCCTCAGTCTCACTGGCGAGTTTAAATAAAGTC +
Preference number: 4 (lower is better)
Translates to: SLACRMSPKLLS*SSVSLASLNKV
Trigger: GACTTTATTTAAACTCGCCAGTGAGACTGAGGACAATGATAACAGTTTGGGGGACATCCTGCAAGCCAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR GCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGCAAAGTGGAAGAGGATaGGGAAGCCGTTTTTATCGT +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVQSGRG*GSRFYR
Trigger: ACGATAAAAACGGCTTCCGCATCCTCTTCCACTTTG...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTGAGAAGGGGAAATACTaGCTCTCTTCATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACEKGKY*LSSFSF
Trigger: GAAGGAAAATGAAGAGAGCCAGTATTTCCCCTTCTC...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGGATGTGGCTCTTGTGGGGAATGACCCATGACAGTCTCTCTTTAGAGACTCCCTCTCTGGAAAGCTCTTaGATTTATTCCTTAAGTAGT +
Preference number: 4 (lower is better)
Translates to: RMWLLWGMTHDSLSLETPSLESS*IYSLSS
Trigger: ACTACTTAAGGAATAAATCCAAGAGCTTTCCAGAGA...GGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR TCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGAGCTCCTTGTTGATCTaGTCACAGAAGCCAATTATG +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVSSLLI*SQKPIM
Trigger: CATAATTGGCTTCTGTGATCAGATCAACAAGGAGCT...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR GCA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTTCGCCATTGATGACCTaGCCTTCAATAATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPSPLMT*PSIIVL
Trigger: CAAAACAATTATTGAAGGGCAGGTCATCAATGGCGA...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGGCTTGGCTAAAAGCTTaGACTTCTCCTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: STLGHMSSVTFVILRPPVAWLKA*TSPHHQ
Trigger: TTGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGC...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CCA 90 bp CAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGTTCTGTCCCAGAAGGTaGCTGCAACTTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: QLRFLGSTLGHMSSVTFVFCPRR*LQLHFH
Trigger: ATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAA...CACAAATGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR TCA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTTTGGAGAGACGACTTTaGTTAACTCATTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACLERRL*LTHSKS
Trigger: GCTTTTTGAATGAGTTAATCAAAGTCGTCTCTCCAA...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS GCA 90 bp AGCTGCCAGGCAGAGGGAAGGCCCGTGGCACCCAGTGTATCACCCTaGTTCCCAGGTCGGGGCTCGGCCTCCCCGGCAGTGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SCQAEGRPVAPSVSP*FPGRGSASPAVFLL
Trigger: CAACAGAAACACTGCCGGGGAGGCCGAGCCCCGACCTGGGAAGCAGGGTGATACACTGGGTGCCACGGGCCTTCCCTCTGCCTGGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000579743.2
ENST00000621870.4
CDS-3UTR CAA 90 bp CCACCTCCCTGGGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGTGGTGCAGCGCGCTGTaGCCCAACGCCAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: PPPWGWQQELVGGGSMELWCSAL*PNAKPW
Trigger: CCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACCA...CAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCCCAGGGAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS CCA 90 bp GCACGGAAGACAGCCCCGGAGGCACTCATTGTTCCCCGCTGCAGCTaGCACGCTCTGGAGGGAAGGACAGCTAACTGCAGCCCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: ARKTAPEALIVPRCS*HALEGRTANCSPGD
Trigger: GTCTCCTGGGCTGCAGTTAGCTGTCCTTCCCTCCAGAGCGTGCCAGCTGCAGCGGGGAACAATGAGTGCCTCCGGGGCTGTCTTCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS-3UTR CAA 90 bp AACTCAGTGGCTGGAAGAGCGGGCTGCCGGGCCCCGTGGAGAAGGGCAGGAGGGAACGTGTGCAGACGCTaGGTCACCTTCTGGATCCGT +
Preference number: 5 (lower is better)
Translates to: NSVAGRAGCRAPWRRAGGNVCRR*VTFWIR
Trigger: ACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTT...CCCTCCTGCCCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGCCACTGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCAGCCCTAGCCCCGCCTaGCCTGAGGAGGGGTCAGGT +
Preference number: 5 (lower is better)
Translates to: DSSEVRGHSAPLTAYGHFSPSPA*PEEGSG
Trigger: ACCTGACCCCTCCTCAGGCAAGGCGGGGCTAGGGCT...GAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS GCA 90 bp CTCCTTCACTGGCAACAGGGCTGCAGGGATCTGAGTAGCGACAGCTaGCAGGCAGAGGGAAGGCCCGTGGCACCCAGTGTATCACCCTGC +
Preference number: 5 (lower is better)
Translates to: LLHWQQGCRDLSSDS*QAEGRPVAPSVSPC
Trigger: GCAGGGTGATACACTGGGTGCCACGGGCCTTCCCTCTGCCTGGCAGCTGTCGCTACTCAGATCCCTGCAGCCCTGTTGCCAGTGAAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000579743.2
ENST00000621870.4
CDS GCA 90 bp AGGACTGCACGGAAGACAGCCCCGGAGGCACTCATTGTTCCCCGCTaGAGCTGGCACGCTCTGGAGGGAAGGACAGCTAACTGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: RTARKTAPEALIVPR*SWHALEGRTANCSP
Trigger: TGGGCTGCAGTTAGCTGTCCTTCCCTCCAGAGCGTGCCAGCTGCAGCGGGGAACAATGAGTGCCTCCGGGGCTGTCTTCCGTGCAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS-3UTR CAA 90 bp AACTCAGTGGCTGGAAGAGCGGGCTGCCGGGCCCCGTGGAGAAGGGCAGGAGGGGTAGCCACCTCGCCATaGATGACCTGCCCTTCAATA +
Preference number: 5 (lower is better)
Translates to: NSVAGRAGCRAPWRRAGGVATSP*MTCPSI
Trigger: TATTGAAGGGCAGGTCATCAATGGCGAGGTGGCTAC...CCCTCCTGCCCTTCTCCACGGGGCCCGGCAGCCCGCTCTTCCAGCCACTGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGCTGCGGGCTCAACTTTaGGGGCCAAGGCTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLLRAQL*GPRLGP
Trigger: TGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCAG...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTTGGTGCAGCGCGCTGTaGCCCAACGCCAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLWCSAL*PNAKPW
Trigger: CCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACCA...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCACCTCCCTGGGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGAGGGCACTGCTAGGCTaGATCGATTCCAGGGGCACG +
Preference number: 5 (lower is better)
Translates to: PPPWGWQQELVGGGSMELRALLG*IDSRGT
Trigger: CGTGCCCCTGGAATCGATCAAGCCTAGCAGTGCCCT...CAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCCCAGGGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTTCCGCCTCCGCCATATaGCAGCCGCCCGGCCCCGCG +
Preference number: 5 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELSASAI*QPPGPA
Trigger: CGCGGGGCCGGGCGGCTGCAATATGGCGGAGGCGGA...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000649398.1
CDS TCA 90 bp AACAGAGACTCCAGCTCCTTCACTGGCAACAGGGCTGCAGGGATCTaGGTAGCGACAGCTGCCAGGCAGAGGGAAGGCCCGTGGCACCCA +
Preference number: 5 (lower is better)
Translates to: NRDSSSFTGNRAAGI*VATAARQREGPWHP
Trigger: TGGGTGCCACGGGCCTTCCCTCTGCCTGGCAGCTGTCGCTACTCAGATCCCTGCAGCCCTGTTGCCAGTGAAGGAGCTGGAGTCTCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000579743.2
ENST00000621870.4
CDS TCA 90 bp GAGGAGCATCGGAGGCGCCACAGGCAGCGGTCCCCGGCCTGGGGCTaGAGAAGTCCAGGTCGGACTGTTCCCTCTATGAACAACAGAAAG +
Preference number: 5 (lower is better)
Translates to: EEHRRRHRQRSPAWG*RSPGRTVPSMNNRK
Trigger: CTTTCTGTTGTTCATAGAGGGAACAGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGACCGCTGCCTGTGGCGCCTCCGATGCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS CCA 90 bp GAGAGGGGAGGTAGTGGGTTTCACCAAGCCCGAGGTCCTGGGAGGTaGGAAGGATGGAAAGCACGTCAGAGAGCCAGCCAGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ERGGSGFHQARGPGR*EGWKARQRASQSCR
Trigger: CCTGCAGCTCTGGCTGGCTCTCTGACGTGCTTTCCATCCTTCCCACCTCCCAGGACCTCGGGCTTGGTGAAACCCACTACCTCCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614198.4
CDS-3UTR CAA 90 bp TGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGACGGAGGACAAACTGTaGGTCGTGTCCAGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: WLAGEAWNCNRAAAPWAVTEDKL*VVSSSA
Trigger: TGCGGAGCTGGACACGACCAACAGTTTGTCCTCCGT...CACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTCTGCGGGCTCAACTTTaGGGGCCAAGGCTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: DVRLLSLFTWAPQASPVSLRAQL*GPRLGP
Trigger: TGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCAG...AGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp ACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCCTGCGGGCTCAACTTTaGGGGCCAAGGCTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: TACHCQGQAHNSSLRGHSLRAQL*GPRLGP
Trigger: TGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCAG...GGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAGCAGAGTAGCTCCTCGTCCAGCCAGGAGAGGGCGTTGCTTGTGCTGCTGGGCAGGGCACTGCTAGGCTaGATCGATTCCAGGGGCACG +
Preference number: 5 (lower is better)
Translates to: KQSSSSSSQERALLVLLGRALLG*IDSRGT
Trigger: CGTGCCCCTGGAATCGATCAAGCCTAGCAGTGCCCT...GCCCAGCAGCACAAGCAACGCCCTCTCCTGGCTGGACGAGGAGCTACTCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp CAGGCAGCGGTCCCCGGCCTGGGGCTGAAGAAGTCCAGGTCGGACTGTTCCCTCTTCTCCTTCAGTGGATaGGCCAGCAACATGACCTGG +
Preference number: 5 (lower is better)
Translates to: QAAVPGLGLKKSRSDCSLFSFSG*ASNMTW
Trigger: CCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAA...GAGGGAACAGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGACCGCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGCAGGGCTGGGGACTTaGCAGTATGCCAGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: DGTRALLVSGQPAWLQGGAGLGT*QYASSL
Trigger: TAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTGC...TCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGGGCATGGAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGCAGGGCTGGGGACTTaGCAGTATGCCAGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: RAWRVTGPEPSSSQGSLPAGLGT*QYASSL
Trigger: TAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTGC...AGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTCCATGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTACGTCTCCGCCTCCGCCATATaGCAGCCGCCCGGCCCCGCG +
Preference number: 5 (lower is better)
Translates to: SSITLVFTFSDTLSPRYVSASAI*QPPGPA
Trigger: CGCGGGGCCGGGCGGCTGCAATATGGCGGAGGCGGA...GACGTACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577435.5
CDS-3UTR CAA 90 bp GTTGGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACATCCGCCTCCGCCATATaGCAGCCGCCCGGCCCCGCG +
Preference number: 5 (lower is better)
Translates to: VGPVMRPNSMSCQDVHRTSASAI*QPPGPA
Trigger: CGCGGGGCCGGGCGGCTGCAATATGGCGGAGGCGGA...TGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000649398.1
CDS TCA 90 bp GCTTATACCGAAGCCGCACCTTCTCCTGTGACAGAGGGCAGCAAGTaGGATCCAGCCCAGGCGGCCCCTTGGCAGGACGCCCTCTATTCT +
Preference number: 5 (lower is better)
Translates to: AYTEAAPSPVTEGSK*DPAQAAPWQDALYS
Trigger: AGAATAGAGGGCGTCCTGCCAAGGGGCCGCCTGGGCTGGATCTCACTTGCTGCCCTCTGTCACAGGAGAAGGTGCGGCTTCGGTATAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578208.1
CDS CCA 90 bp CAGGGAGGCCTGCCTGGCTTTAAGGGACCCCCTGCAAAGAGTGCCTaGATCCATCCCTGTCGCATGTCCTACAGCTCCGTGGCTATAGGC +
Preference number: 5 (lower is better)
Translates to: QGGLPGFKGPPAKSA*IHPCRMSYSSVAIG
Trigger: GCCTATAGCCACGGAGCTGTAGGACATGCGACAGGGATGGATCCAGGCACTCTTTGCAGGGGGTCCCTTAAAGCCAGGCAGGCCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614198.4
CDS-3UTR CAA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTACGGAGGACAAACTGTaGGTCGTGTCCAGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: AKQEVVSRMACPHGWRHATEDKL*VVSSSA
Trigger: TGCGGAGCTGGACACGACCAACAGTTTGTCCTCCGT...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACAGGGCACTGCTAGGCTaGATCGATTCCAGGGGCACG +
Preference number: 5 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHRALLG*IDSRGT
Trigger: CGTGCCCCTGGAATCGATCAAGCCTAGCAGTGCCCT...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGTGCAGCACGATGCTCTaGACAGGTAAGGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: LITPWPFQDDAVHQRQGWCSTML*TGKGAV
Trigger: CACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCA...CCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACATGCAGCACGATGCTCTaGACAGGTAAGGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: PEPSSSQGSLPGFKVEITCSTML*TGKGAV
Trigger: CACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCA...TGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACACAGGGCTGCAGCCCCTaGGGCCGTGCATCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: RLGVHVPGSHPAARVAGTQGCSP*GRASVR
Trigger: CCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCTG...TGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp CGGGACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACGCAGGGCTGGGGACTTaGCAGTATGCCAGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: RDSSEVRGHSAPLTAYGHAGLGT*QYASSL
Trigger: TAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTGC...GTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGGTCCGATTGCTGAGCTaGTTCACCTGGGCTCCGCAA +
Preference number: 5 (lower is better)
Translates to: LITPWPFQDDAVHQRQGWVRLLS*FTWAPQ
Trigger: TTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGAC...CCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCCCCAGAGATGTCCGATaGCTGAGCTTGTTCACCTGG +
Preference number: 5 (lower is better)
Translates to: SWLAGEAWNCNRAAAPWAPRDVR*LSLFTW
Trigger: CCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGG...GGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GCTGCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGGGGACACTCTAGGCTaGATCGATTCCAGGGGCACG +
Preference number: 5 (lower is better)
Translates to: AAPPGRRSAYTEAAPSPSGDTLG*IDSRGT
Trigger: CGTGCCCCTGGAATCGATCAAGCCTAGAGTGTCCCC...TGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000584550.1
CDS TCA 90 bp GGCACGCTCTGGAGGGAAGGACAGCTAACTGCAGCCCAGGAGACATaGCGCTGGAAAGTGGAGGTCCTTGGCACAGTAGTGCTGTCACCG +
Preference number: 5 (lower is better)
Translates to: GTLWREGQLTAAQET*RWKVEVLGTVVLSP
Trigger: CGGTGACAGCACTACTGTGCCAAGGACCTCCACTTTCCAGCGTCATGTCTCCTGGGCTGCAGTTAGCTGTCCTTCCCTCCAGAGCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS CCA 90 bp GCACTATGCCTGAAAGGGGACATGGCAGCACGTGCACTCAGGCTGTaGTTGCCTTGTCACCCCTCCTCATACACCAAGGGCCACGTCCCT +
Preference number: 5 (lower is better)
Translates to: ALCLKGDMAARALRL*LPCHPSSYTKGHVP
Trigger: AGGGACGTGGCCCTTGGTGTATGAGGAGGGGTGACAAGGCAACCACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR CAA 90 bp CGGGACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTGGCGGTTGGAAGGATaGGTGGCTTTATTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: RDSSEVRGHSAPLTAYGHWRLEG*VALLSQ
Trigger: CTGGCTCAATAAAGCCACCAATCCTTCCAACCGCCA...GTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCTCCTTCACCATGGACTaGATGAGCTTGTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVSFTMD*MSLLAS
Trigger: GGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGA...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTGAGGTTGTCACTGGCTaGCAGGATGTCCCCCAAACT +
Preference number: 5 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAEVVTG*QDVPQT
Trigger: AGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTC...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGCTGCGGGCTCAACTTTaGGGGCCAAGGCTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: KHTTHHSVAIPGRCCPPELRAQL*GPRLGP
Trigger: TGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCAG...CTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGATGGTGCAGCGCGCTGTaGCCCAACGCCAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: QAHNSSLRGHSRTMLSTRWCSAL*PNAKPW
Trigger: CCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACCA...TCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCTTCACTTTCATTGACTaGGGCACTGCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVFTFID*GTAACS
Trigger: GCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAA...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTGGGGATGGCAGCAGGAGTTCTCCTTCAGTGGATaGGCCAGCAACATGACCTGG +
Preference number: 5 (lower is better)
Translates to: LFWARHLPGPPPWGWQQEFSFSG*ASNMTW
Trigger: CCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAA...CTCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp CGGGACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCTCCTTCAGTGGATaGGCCAGCAACATGACCTGG +
Preference number: 5 (lower is better)
Translates to: RDSSEVRGHSAPLTAYGHFSFSG*ASNMTW
Trigger: CCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAA...GTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCAGGGCTGCAGCCCCTaGGGCCGTGCATCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: QDVHRTQPATARDKHTTHQGCSP*GRASVR
Trigger: CCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCTG...ATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCCCAGAGATGTCCGATaGCTGAGCTTGTTCACCTGG +
Preference number: 5 (lower is better)
Translates to: GMAAGAGWRGKHGIATGLPRDVR*LSLFTW
Trigger: CCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGG...CAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp CCACCTCCCTGGGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGATCCAGTACAGCCATTaGCCACGAAGCACTGACCTC +
Preference number: 5 (lower is better)
Translates to: PPPWGWQQELVGGGSMELIQYSH*PRSTDL
Trigger: GAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGAT...CAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCCCAGGGAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp CTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCTGGAGGAGCTTCAGTGGATaGGCCAGCAACATGACCTGG +
Preference number: 5 (lower is better)
Translates to: LITPWPFQDDAVHQRQGWRSFSG*ASNMTW
Trigger: CCAGGTCATGTTGCTGGCCAATCCACTGAAGCTCCT...CCAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583282.5
CDS TCA 90 bp CCCACATCTCCTCCCACTCATTACACTTTGGCCTCTTCTAGAAGCTaGTCGAGGGCATCCAGGTGGTGCAGCGCGCTGTTGCCCAACGCC +
Preference number: 5 (lower is better)
Translates to: PTSPPTHYTLASSRS*SRASRWCSALLPNA
Trigger: GGCGTTGGGCAACAGCGCGCTGCACCACCTGGATGCCCTCGATCAGCTTCTAGAAGAGGCCAAAGTGTAATGAGTGGGAGGAGATGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614198.4
CDS CCA 90 bp GGGGATGGCAGCAGGAGCTTCAGTGGATTGGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGCTGGATGGGGCTAAATGGAGAGAGT +
Preference number: 5 (lower is better)
Translates to: GDGSRSFSGLASNMT*VMAAGGWMGLNGES
Trigger: ACTCTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGCCAATCCACTGAAGCTCCTGCTGCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583282.5
CDS CCA 90 bp GACTTTGCAGTATGCCAGTTCCTTATTCTGGGCCAGGCACCTTCCTaGGCCACCTCCCTGGGGATGGCAGCAGGAGCTTCAGTGGATTGG +
Preference number: 5 (lower is better)
Translates to: DFAVCQFLILGQAPS*ATSLGMAAGASVDW
Trigger: CCAATCCACTGAAGCTCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGCATACTGCAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583282.5
CDS-3UTR CAA 90 bp AGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCTCCTATCCACAGGAATaGGTGGGTCAGACTGCACTA +
Preference number: 5 (lower is better)
Translates to: SWLAGEAWNCNRAAAPWASYPQE*VGQTAL
Trigger: TAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGA...GGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
CDS-3UTR CAA 90 bp AGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTATGGACTTGATGAGCTaGTTGGCCTCCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SPPRLRAACLASRWRSQRMDLMS*LASCRS
Trigger: TGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCAT...ACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAGCAGAGTAGCTCCTCGTCCAGCCAGGAGAGGGCGTTGCTTGTGCTGCTGGGCATGGACTTGATGAGCTaGTTGGCCTCCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: KQSSSSSSQERALLVLLGMDLMS*LASCRS
Trigger: TGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCAT...GCCCAGCAGCACAAGCAACGCCCTCTCCTGGCTGGACGAGGAGCTACTCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GCCAGTAGAAGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGGAGGTTGTCACTGGCTaGCAGGATGTCCCCCAAACT +
Preference number: 5 (lower is better)
Translates to: ASRRKQTPTPSLGVHVPGEVVTG*QDVPQT
Trigger: AGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTC...CCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCTTCTACTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTGTAGCCACCTCGCCATaGATGACCTGCCCTTCAATA +
Preference number: 5 (lower is better)
Translates to: AKQEVVSRMACPHGWRHAVATSP*MTCPSI
Trigger: TATTGAAGGGCAGGTCATCAATGGCGAGGTGGCTAC...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCAGTCGATGAGCGTGCCTaGGTTACTGCACTGACTGTT +
Preference number: 5 (lower is better)
Translates to: DQSPPRLRAACLASRWRSVDERA*VTALTV
Trigger: AACAGTCAGTGCAGTAACCAAGGCACGCTCATCGAC...TGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACAAGGGCACTGCTAGGCTaGATCGATTCCAGGGGCACG +
Preference number: 5 (lower is better)
Translates to: CPAKMSIGHSLPLPGTSTRALLG*IDSRGT
Trigger: CGTGCCCCTGGAATCGATCAAGCCTAGCAGTGCCCT...TGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCAGGGCACTGCTAGGCTaGATCGATTCCAGGGGCACG +
Preference number: 5 (lower is better)
Translates to: PGTSTQLITPWPFQDDAVRALLG*IDSRGT
Trigger: CGTGCCCCTGGAATCGATCAAGCCTAGCAGTGCCCT...GACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCAGGGCACTGCTAGGCTaGATCGATTCCAGGGGCACG +
Preference number: 5 (lower is better)
Translates to: AKMSIGHSLPLPGTSTQLRALLG*IDSRGT
Trigger: CGTGCCCCTGGAATCGATCAAGCCTAGCAGTGCCCT...GAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCTGCAGCACGATGCTCTaGACAGGTAAGGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: PCPAKMSIGHSLPLPGTSCSTML*TGKGAV
Trigger: CACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCA...GCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGTGCAGCACGATGCTCTaGACAGGTAAGGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: SQGPLRTPDSIWPLQVTQCSTML*TGKGAV
Trigger: CACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCA...CTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GAGAGTGACGGGACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGCAACTTCACTTTCATaGACTTGGGCACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: ESDGTRALLVSGQPAWLQATSLS*TWALQP
Trigger: AGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGC...TTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTCAGGGCTGCAGCCCCTaGGGCCGTGCATCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVQGCSP*GRASVR
Trigger: CCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCTG...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp AGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGTCCGATTGCTGAGCTaGTTCACCTGGGCTCCGCAA +
Preference number: 5 (lower is better)
Translates to: SLPLPGTSTQLITPWPFQVRLLS*FTWAPQ
Trigger: TTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGAC...CTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCTTGGGCCGTGCATCTGTCAGGTGTGAGGATGTGGCTCTTGTGGGGAATGACCGTCCGATTGCTGAGCTaGTTCACCTGGGCTCCGCAA +
Preference number: 5 (lower is better)
Translates to: PWAVHLSGVRMWLLWGMTVRLLS*FTWAPQ
Trigger: TTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGAC...GGTCATTCCCCACAAGAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS GCA 90 bp AGGAAGCCTGGCAAGGGGCAGGGAGGAACCAGGGAACATGGTCTGTaGCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: RKPGKGQGGTREHGL*HLPFPRDVRLLSLF
Trigger: GAACAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCTGGTTCCTCCCTGCCCCTTGCCAGGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000613421.4
ENST00000614198.4
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS GCA 90 bp GGTGGGTCAGACTGCACTATGCCTGAAAGGGGACATGGCAGCACGTaGACTCAGGCTGTGGTTGCCTTGTCACCCCTCCTCATACACCAA +
Preference number: 5 (lower is better)
Translates to: GGSDCTMPERGHGST*TQAVVALSPLLIHQ
Trigger: TTGGTGTATGAGGAGGGGTGACAAGGCAACCACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS CCA 90 bp TGGTCTCTGGAGTCAGACTCAGGTTTCCATCTGGCCCTTACACCCTaGACAAGTCAGCTGATCCCAGGAGGCAAATGGGGACGCCACCCT +
Preference number: 5 (lower is better)
Translates to: WSLESDSGFHLALTP*TSQLIPGGKWGRHP
Trigger: AGGGTGGCGTCCCCATTTGCCTCCTGGGATCAGCTGACTTGTCCAGGGTGTAAGGGCCAGATGGAAACCTGAGTCTGACTCCAGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582821.5
ENST00000613421.4
CDS CCA 90 bp GCCCAACCCTCAGCAACCCCACATCTCCTCCCACTCATTACACTTTaGCCTCTTCTAGAAGCTGATCGAGGGCATCCAGGTGGTGCAGCG +
Preference number: 5 (lower is better)
Translates to: AQPSATPHLLPLITL*PLLEADRGHPGGAA
Trigger: CGCTGCACCACCTGGATGCCCTCGATCAGCTTCTAGAAGAGGCCAAAGTGTAATGAGTGGGAGGAGATGTGGGGTTGCTGAGGGTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614198.4
CDS-3UTR CAA 90 bp GCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGGGATTGGTGGCTTTATaGAGCCAGGACTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: ACHCQGQAHNSSLRGHSRGLVAL*SQDSRL
Trigger: AAGCCTGGAGTCCTGGCTCAATAAAGCCACCAATCC...CCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CTGAAAGGGGACATGGCAGCACGTGCACTCAGGCTGTGGTTGCCTTGTCACCCCTGGCGGTTGGAAGGATaGGTGGCTTTATTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: LKGDMAARALRLWLPCHPWRLEG*VALLSQ
Trigger: CTGGCTCAATAAAGCCACCAATCCTTCCAACCGCCA...GGGGTGACAAGGCAACCACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR CAA 90 bp GTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: VVSRMACPHGWRHAFPRKQSSWR*EGLVAL
Trigger: TAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTG...CTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TGGGACGAGGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: WDEVVERGSASYPQELVGQSSWR*EGLVAL
Trigger: TAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTG...ACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACCTCGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584243.5
ENST00000621870.4
CDS-3UTR CAA 90 bp ACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: TTHHSVAIPGRCCPPEAGQSSWR*EGLVAL
Trigger: TAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTG...CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGGACTTGATGAGCTTGTaGGCCTCCTGCAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLDLMSL*ASCRSS
Trigger: AGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTC...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GACAGCAGTGAAGTCAGGGGCCACTCCGCACCCCTGACAGCATATGGCCACTTCGACTTGATGAGCTTGTaGGCCTCCTGCAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: DSSEVRGHSAPLTAYGHFDLMSL*ASCRSS
Trigger: AGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTC...GAAGTGGCCATATGCTGTCAGGGGTGCGGAGTGGCCCCTGACTTCACTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCAGTAGAAGGAAGCAAACACCTACGCCAAGCCTGGGGGTCCATGTTCCCGGGTCCTTCACCATGGACTaGATGAGCTTGTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: ASRRKQTPTPSLGVHVPGSFTMD*MSLLAS
Trigger: GGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGA...CCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCTTCTACTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp ATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTCCTTCACCATGGACTaGATGAGCTTGTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: MACPHGWRHAFPRKLSTCSFTMD*MSLLAS
Trigger: GGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGA...GCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGAAACGTGTGCAGACGCTaGGTCACCTTCTGGATCCGT +
Preference number: 5 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRNVCRR*VTFWIR
Trigger: ACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTT...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp ACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGGAGGTTGTCACTGGCTaGCAGGATGTCCCCCAAACT +
Preference number: 5 (lower is better)
Translates to: TTHHSVAIPGRCCPPEAGEVVTG*QDVPQT
Trigger: AGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTC...CCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACGAGGTTGTCACTGGCTaGCAGGATGTCCCCCAAACT +
Preference number: 5 (lower is better)
Translates to: GSGDSAQVWPDLITSRPNEVVTG*QDVPQT
Trigger: AGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTC...GTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCGTCGATGAGCGTGCCTaGGTTACTGCACTGACTGTT +
Preference number: 5 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTVDERA*VTALTV
Trigger: AACAGTCAGTGCAGTAACCAAGGCACGCTCATCGAC...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTACGGAGGACAAACTGTaGGTCGTGTCCAGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFTEDKL*VVSSSA
Trigger: TGCGGAGCTGGACACGACCAACAGTTTGTCCTCCGT...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTGGTGCAGCGCGCTGTaGCCCAACGCCAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVWCSAL*PNAKPW
Trigger: CCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACCA...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGGATGTGGCTCTTGTGGGGAATGACCCATGACAGTCTCTCTTTAGAGACTCCCTGGTGCAGCGCGCTGTaGCCCAACGCCAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: RMWLLWGMTHDSLSLETPWCSAL*PNAKPW
Trigger: CCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACCA...GGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAAGAGCCACATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GACCAGAGCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCAGCAACTTCACTTTCATaGACTTGGGCACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: DQSPPRLRAACLASRWRSATSLS*TWALQP
Trigger: AGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGC...TGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCTCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGTTCTCCTTCAGTGGATaGGCCAGCAACATGACCTGG +
Preference number: 5 (lower is better)
Translates to: APPGRRSAYTEAAPSPSVFSFSG*ASNMTW
Trigger: CCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAA...CACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp TTCCATTTCCACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCCAGGGCTGCAGCCCCTaGGGCCGTGCATCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: FHFHIVIPQTFPGLQQPVQGCSP*GRASVR
Trigger: CCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCTG...GACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTGGAAATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTCCCAGAGATGTCCGATaGCTGAGCTTGTTCACCTGG +
Preference number: 5 (lower is better)
Translates to: DVRLLSLFTWAPQASPVSPRDVR*LSLFTW
Trigger: CCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGG...AGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp ACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCCCCAGAGATGTCCGATaGCTGAGCTTGTTCACCTGG +
Preference number: 5 (lower is better)
Translates to: TACHCQGQAHNSSLRGHSPRDVR*LSLFTW
Trigger: CCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGG...GGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGATCCAGTACAGCCATTaGCCACGAAGCACTGACCTC +
Preference number: 5 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLIQYSH*PRSTDL
Trigger: GAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGAT...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCACTTTACCCGCCTGCTaGGGGAATGTCCTCCTACTT +
Preference number: 5 (lower is better)
Translates to: QEVVSRMACPHGWRHAFPTLPAC*GNVLLL
Trigger: AAGTAGGAGGACATTCCCCAAGCAGGCGGGTAAAGT...GGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582486.5
CDS-3UTR CAA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGGCGGTTGGAAGGATaGGTGGCTTTATTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRWRLEG*VALLSQ
Trigger: CTGGCTCAATAAAGCCACCAATCCTTCCAACCGCCA...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTTCCTATCCACAGGAATaGGTGGGTCAGACTGCACTA +
Preference number: 5 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLSYPQE*VGQTAL
Trigger: TAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGA...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGCAGCCCCTTGGGCCGTGAGCTTGGCTAAAAGCTaGGACTTCTCCTCATCATCA +
Preference number: 5 (lower is better)
Translates to: WLAGEAWNCNRAAAPWAVSLAKS*DFSSSS
Trigger: TGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGCT...CACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
CDS-3UTR CAA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGAATGGACTTGATGAGCTaGTTGGCCTCCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRMDLMS*LASCRS
Trigger: TGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCAT...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGTCCTTCACCATGGACTaGATGAGCTTGTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VVSRMACPHGWRHAFPRKSFTMD*MSLLAS
Trigger: GGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGA...CTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATCCTTCACCATGGACTaGATGAGCTTGTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: ATARDKHTTHHSVAIPGRSFTMD*MSLLAS
Trigger: GGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGA...TCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGAACGTGTGCAGACGCTaGGTCACCTTCTGGATCCGT +
Preference number: 5 (lower is better)
Translates to: CQGQAHNSSLRGHSRTMLNVCRR*VTFWIR
Trigger: ACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTT...CAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTAACGTGTGCAGACGCTaGGTCACCTTCTGGATCCGT +
Preference number: 5 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFNVCRR*VTFWIR
Trigger: ACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTT...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp ACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGAACGTGTGCAGACGCTaGGTCACCTTCTGGATCCGT +
Preference number: 5 (lower is better)
Translates to: TQLITPWPFQDDAVHQRQNVCRR*VTFWIR
Trigger: ACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTT...CTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCCTCCTCGTCTCAGGGCAGCCTGCCTGGCTTCAAGGTGGAGATCACAGCGTCAGCAGTCTCACGTTGTaGTTAACTTCCTCTAACGTG +
Preference number: 5 (lower is better)
Translates to: ALLVSGQPAWLQGGDHSVSSLTL*LTSSNV
Trigger: CACGTTAGAGGAAGTTAACAACAACGTGAGACTGCT...GACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTCCCAAACTGTTATCATaGTCCTCAGTCTCACTGGCG +
Preference number: 5 (lower is better)
Translates to: GLSPRLEARFSQKAEYLLPKLLS*SSVSLA
Trigger: CGCCAGTGAGACTGAGGACAATGATAACAGTTTGGG...AAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCCCCAAACTGTTATCATaGTCCTCAGTCTCACTGGCG +
Preference number: 5 (lower is better)
Translates to: QEVVSRMACPHGWRHAFPPKLLS*SSVSLA
Trigger: CGCCAGTGAGACTGAGGACAATGATAACAGTTTGGG...GGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGCCCAAACTGTTATCATaGTCCTCAGTCTCACTGGCG +
Preference number: 5 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLPKLLS*SSVSLA
Trigger: CGCCAGTGAGACTGAGGACAATGATAACAGTTTGGG...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGAGTACCCCCAAACTGTTATCATaGTCCTCAGTCTCACTGGCG +
Preference number: 5 (lower is better)
Translates to: RMACPHGWRHAFPRKLSTPKLLS*SSVSLA
Trigger: CGCCAGTGAGACTGAGGACAATGATAACAGTTTGGG...GGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGTAGCCACCTCGCCATaGATGACCTGCCCTTCAATA +
Preference number: 5 (lower is better)
Translates to: HNSSLRGHSRTMLSTRGRVATSP*MTCPSI
Trigger: TATTGAAGGGCAGGTCATCAATGGCGAGGTGGCTAC...CCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGTCGATGAGCGTGCCTaGGTTACTGCACTGACTGTT +
Preference number: 5 (lower is better)
Translates to: LPLPGTSTQLITPWPFQDVDERA*VTALTV
Trigger: AACAGTCAGTGCAGTAACCAAGGCACGCTCATCGAC...GTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TCCCCCAGGGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTCCCAGCTGACTCTTaGGGAGGAACATTAGGGGCT +
Preference number: 5 (lower is better)
Translates to: SPRAKVSLYRSRTFSFSGFPADS*GGTLGA
Trigger: AGCCCCTAATGTTCCTCCCAAAGAGTCAGCTGGGAA...TCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCCCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCAGGGCACTGCTAGGCTaGATCGATTCCAGGGGCACG +
Preference number: 5 (lower is better)
Translates to: VMRPNSMSCQDVHRTQPARALLG*IDSRGT
Trigger: CGTGCCCCTGGAATCGATCAAGCCTAGCAGTGCCCT...GGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TTTCCCCAGAGATGTCCGATTGCTGAGCTTGTTCACCTGGGCTCCGCAAGCTTCTGCAGCACGATGCTCTaGACAGGTAAGGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: FPQRCPIAELVHLGSASFCSTML*TGKGAV
Trigger: CACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCA...GAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCATGCAGCACGATGCTCTaGACAGGTAAGGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: DKHTTHHSVAIPGRCCPPCSTML*TGKGAV
Trigger: CACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCA...TGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGTGCAGCACGATGCTCTaGACAGGTAAGGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: KHTTHHSVAIPGRCCPPECSTML*TGKGAV
Trigger: CACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCA...CTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCTTCACTTTCATTGACTaGGGCACTGCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PCPAKMSIGHSLPLPGTSFTFID*GTAACS
Trigger: GCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAA...GCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp ACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCTTCACTTTCATTGACTaGGGCACTGCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TACHCQGQAHNSSLRGHSFTFID*GTAACS
Trigger: GCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAA...GGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGTTCACTTTCATTGACTaGGGCACTGCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CHCQGQAHNSSLRGHSRTFTFID*GTAACS
Trigger: GCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAA...CGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGGCGCAACTTCACTTTCATaGACTTGGGCACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: QLITPWPFQDDAVHQRQGATSLS*TWALQP
Trigger: AGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGC...GCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGGATGGCAGCAGGAGCTGGTTGGCGGGGGAAGCATGGAATTGCAACAGGGCTGTATCACAGCAGCAGTTaGGTTCTCAGCAGAAATGCC +
Preference number: 5 (lower is better)
Translates to: GMAAGAGWRGKHGIATGLYHSSS*VLSRNA
Trigger: GGCATTTCTGCTGAGAACCAAACTGCTGCTGTGATA...CAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACCAGCTCCTGCTGCCATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp CATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCAGGGCTGGGGACTTaGCAGTATGCCAGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: HRTQPATARDKHTTHHSVAGLGT*QYASSL
Trigger: TAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTGC...CACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCGCAGGGCTGGGGACTTaGCAGTATGCCAGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: PGTSTQLITPWPFQDDAVAGLGT*QYASSL
Trigger: TAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTGC...GACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCAGGGCTGGGGACTTaGCAGTATGCCAGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: PLPGTSTQLITPWPFQDDAGLGT*QYASSL
Trigger: TAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTGC...ATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACGTCCGATTGCTGAGCTaGTTCACCTGGGCTCCGCAA +
Preference number: 5 (lower is better)
Translates to: NSMSCQDVHRTQPATARDVRLLS*FTWAPQ
Trigger: TTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGAC...GTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATATCCAGTACAGCCATTaGCCACGAAGCACTGACCTC +
Preference number: 5 (lower is better)
Translates to: DTACHCQGQAHNSSLRGHIQYSH*PRSTDL
Trigger: GAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGAT...ATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTTGCCACTTCAGTGGATaGGCCAGCAACATGACCTGG +
Preference number: 5 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFCHFSG*ASNMTW
Trigger: CCAGGTCATGTTGCTGGCCAATCCACTGAAGTGGCA...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582486.5
CDS CCA 90 bp GTTGATGACCCGGGAGAGGTTGTCACTGGCTTGCAGGATGTCCCCTaGAGCAGGAAAGAGAGACTTCTCACTCCTGTTGTGACAGTTCCC +
Preference number: 5 (lower is better)
Translates to: VDDPGEVVTGLQDVP*SRKERLLTPVVTVP
Trigger: GGGAACTGTCACAACAGGAGTGAGAAGTCTCTCTTTCCTGCTCCAGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGGGTCATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578896.1
ENST00000582232.1
CDS CCA 90 bp GGTTCTTTGCTGCTCACCTTCAGTGGATTGGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGCTGGATGGGGCTAAATGGAGAGAGT +
Preference number: 5 (lower is better)
Translates to: GSLLLTFSGLASNMT*VMAAGGWMGLNGES
Trigger: ACTCTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGCCAATCCACTGAAGGTGAGCAGCAAAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578208.1
CDS CCA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTaGAGGCACGCTTTTCCCAGAAAGCTGAGTACCTGCTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: HAKQEVVSRMACPHG*RHAFPRKLSTCFFS
Trigger: ACTGAAGAAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578348.5
CDS-3UTR CAA 90 bp GATGAGAGGGGAGGTAGTGGGTTTCACCAAGCCCGAGGTCACTTTGGCCTCTTCGGATTGGTGGCTTTATaGAGCCAGGACTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: DERGGSGFHQARGHFGLFGLVAL*SQDSRL
Trigger: AAGCCTGGAGTCCTGGCTCAATAAAGCCACCAATCC...GAAGAGGCCAAAGTGACCTCGGGCTTGGTGAAACCCACTACCTCCCCTCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS-3UTR CAA 90 bp GGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCTCCTATCCACAGGAATaGGTGGGTCAGACTGCACTA +
Preference number: 5 (lower is better)
Translates to: GGGEGISVLSTGIGGSDCSYPQE*VGQTAL
Trigger: TAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGA...GCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584243.5
ENST00000621870.4
CDS-3UTR CAA 90 bp GCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTGCTTTTCAGCAGCTaGGCTAAAAGCTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: AKQEVVSRMACPHGWRHALLFSS*AKSLDF
Trigger: GAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCAA...AGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCAAGGTCATCTGGGTTTTaGCTTTTCAGCAGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GHSLPLPGTSTQLITPWPRSSGF*LFSSLA
Trigger: AGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACCT...TGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACAGACTTGATGAGCTTGTaGGCCTCCTGCAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: CPAKMSIGHSLPLPGTSTDLMSL*ASCRSS
Trigger: AGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTC...TGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTATGGACTTGATGAGCTaGTTGGCCTCCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFMDLMS*LASCRS
Trigger: TGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCAT...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATATGGACTTGATGAGCTaGTTGGCCTCCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PLPGTSTQLITPWPFQDDMDLMS*LASCRS
Trigger: TGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCAT...ATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCACCCAAACTGTTATCATaGTCCTCAGTCTCACTGGCG +
Preference number: 5 (lower is better)
Translates to: QPATARDKHTTHHSVAIPPKLLS*SSVSLA
Trigger: CGCCAGTGAGACTGAGGACAATGATAACAGTTTGGG...TGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTTTGAGGTTGTCACTGGCTaGCAGGATGTCCCCCAAACT +
Preference number: 5 (lower is better)
Translates to: LFTWAPQASPVSMAAGDFEVVTG*QDVPQT
Trigger: AGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTC...AAAATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTTTCCCAGCTGACTCTTaGGGAGGAACATTAGGGGCT +
Preference number: 5 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFFPADS*GGTLGA
Trigger: AGCCCCTAATGTTCCTCCCAAAGAGTCAGCTGGGAA...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATTTCCCAGCTGACTCTTaGGGAGGAACATTAGGGGCT +
Preference number: 5 (lower is better)
Translates to: PLPGTSTQLITPWPFQDDFPADS*GGTLGA
Trigger: AGCCCCTAATGTTCCTCCCAAAGAGTCAGCTGGGAA...ATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCTGGTGCAGCGCGCTGTaGCCCAACGCCAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFWCSAL*PNAKPW
Trigger: CCATGGCTTGGCGTTGGGCAACAGCGCGCTGCACCA...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACCTCAACTGCAGCACGATGCTCTaGACAGGTAAGGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: QQSWDIQYSHLPRSTDLNCSTML*TGKGAV
Trigger: CACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCA...GTTGAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATTTCACTTTCATTGACTaGGGCACTGCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PLPGTSTQLITPWPFQDDFTFID*GTAACS
Trigger: GCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAA...ATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGTTCACTTTCATTGACTaGGGCACTGCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SMSCQDVHRTQPATARDKFTFID*GTAACS
Trigger: GCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAA...CTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp ACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGTTCTCCTTCAGTGGATaGGCCAGCAACATGACCTGG +
Preference number: 5 (lower is better)
Translates to: TQLITPWPFQDDAVHQRQFSFSG*ASNMTW
Trigger: CCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAA...CTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGTTCTCCTTCAGTGGATaGGCCAGCAACATGACCTGG +
Preference number: 5 (lower is better)
Translates to: GEGQLIPKPHLLLQWIGQFSFSG*ASNMTW
Trigger: CCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAA...CTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578773.1
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp CAAGGGCAGCAGAGCTGGGATATCCAGTACAGCCATTTGCCACGAAGCACTGACCCCAGAGATGTCCGATaGCTGAGCTTGTTCACCTGG +
Preference number: 5 (lower is better)
Translates to: QGQQSWDIQYSHLPRSTDPRDVR*LSLFTW
Trigger: CCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGG...GTCAGTGCTTCGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTTTAGCAGTGAAACCTGCTaGCTAAAGACAGCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: LFTWAPQASPVSMAAGDFSSETC*LKTARG
Trigger: GCCCCTCGCTGTCTTTAGCAAGCAGGTTTCACTGCT...AAAATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAAGCAGTGAAACCTGCTaGCTAAAGACAGCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: QAHNSSLRGHSRTMLSTRSSETC*LKTARG
Trigger: GCCCCTCGCTGTCTTTAGCAAGCAGGTTTCACTGCT...TCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAACCAACTCAGGGTTCTTaGCCCACCCCAACAGTCACA +
Preference number: 5 (lower is better)
Translates to: GLEYMSQDHIQQLEWLGQPTQGS*PTPTVT
Trigger: TGTGACTGTTGGGGTGGGCAAAGAACCCTGAGTTGG...TTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS CCA 90 bp AAGCTGAGTACCTGCTTCTTCAGTGGATTGGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGCTGGATGGGGCTAAATGGAGAGAGT +
Preference number: 5 (lower is better)
Translates to: KLSTCFFSGLASNMT*VMAAGGWMGLNGES
Trigger: ACTCTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGCCAATCCACTGAAGAAGCAGGTACTCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578348.5
CDS CCA 90 bp GGCTACTCCGTGGTCATGATGAGTCCAGTGCTTCCTAACGGAATCTaGGAGAGGCGCTCAGTGAGGAGCTTAAGACTGAGAATGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GYSVVMMSPVLPNGI*ERRSVRSLRLRMQA
Trigger: TGCCTGCATTCTCAGTCTTAAGCTCCTCACTGAGCGCCTCTCCCAGATTCCGTTAGGAAGCACTGGACTCATCATGACCACGGAGTAGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614198.4
CDS-3UTR CAA 90 bp GAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGCAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: EHGLCHLPFPRDVRLLSLQSSWR*EGLVAL
Trigger: TAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTG...CAAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCTCCTATCCACAGGAATaGGTGGGTCAGACTGCACTA +
Preference number: 5 (lower is better)
Translates to: AKMSIGHSLPLPGTSTQLSYPQE*VGQTAL
Trigger: TAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGA...GAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACAGCTTGGCTAAAAGCTaGGACTTCTCCTCATCATCA +
Preference number: 5 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHSLAKS*DFSSSS
Trigger: TGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGCT...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAAGGTCATCTGGGTTTTaGCTTTTCAGCAGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: QPATARDKHTTHHSVAIPRSSGF*LFSSLA
Trigger: AGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACCT...TGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp ACCAGGGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGGACTTGATGAGCTTGTaGGCCTCCTGCAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: TREHGLCHLPFPRDVRLLDLMSL*ASCRSS
Trigger: AGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTC...CAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGACTTGATGAGCTTGTaGGCCTCCTGCAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: QAHNSSLRGHSRTMLSTRDLMSL*ASCRSS
Trigger: AGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTC...TCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACAGCAGTCTCACGTTGTaGTTAACTTCCTCTAACGTG +
Preference number: 5 (lower is better)
Translates to: HAKQEVVSRMACPHGWRHSSLTL*LTSSNV
Trigger: CACGTTAGAGGAAGTTAACAACAACGTGAGACTGCT...GTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTCCCAGAAAGCTGCTGAGCAGTCTCACGTaGTTGTTAACTTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: VSRMACPHGWRHAFPRKLLSSLT*LLTSSN
Trigger: GTTAGAGGAAGTTAACAACAACGTGAGACTGCTCAG...CAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TTTCCTTCCGAGTCAGGCAGGGTTAAGGTAGCCACCTCGCCATTGATGACCTGCGTAGCCACCTCGCCATaGATGACCTGCCCTTCAATA +
Preference number: 5 (lower is better)
Translates to: FPSESGRVKVATSPLMTCVATSP*MTCPSI
Trigger: TATTGAAGGGCAGGTCATCAATGGCGAGGTGGCTAC...GCAGGTCATCAATGGCGAGGTGGCTACCTTAACCCTGCCTGACTCGGAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp CCATTTCCACATAGTAATTCCACAGACATTCCCAGGGCTGCAGCAGCCAGTCTCACGGAGGACAAACTGTaGGTCGTGTCCAGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: PFPHSNSTDIPRAAAASLTEDKL*VVSSSA
Trigger: TGCGGAGCTGGACACGACCAACAGTTTGTCCTCCGT...GAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACTATGTGGAAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TGCAACTTCACTTTCATTGACTTGGGCACTGCAGCCTGCAGCACGATGCTCTTGACGGAGGACAAACTGTaGGTCGTGTCCAGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: CNFTFIDLGTAACSTMLLTEDKL*VVSSSA
Trigger: TGCGGAGCTGGACACGACCAACAGTTTGTCCTCCGT...CAAGAGCATCGTGCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp AATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACTTCCCAGCTGACTCTTaGGGAGGAACATTAGGGGCT +
Preference number: 5 (lower is better)
Translates to: NSMSCQDVHRTQPATARDFPADS*GGTLGA
Trigger: AGCCCCTAATGTTCCTCCCAAAGAGTCAGCTGGGAA...GTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp ACCAGGGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGTTCCCAGCTGACTCTTaGGGAGGAACATTAGGGGCT +
Preference number: 5 (lower is better)
Translates to: TREHGLCHLPFPRDVRLLFPADS*GGTLGA
Trigger: AGCCCCTAATGTTCCTCCCAAAGAGTCAGCTGGGAA...CAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACATTCCCAGCTGACTCTTaGGGAGGAACATTAGGGGCT +
Preference number: 5 (lower is better)
Translates to: RLGVHVPGSHPAARVAGTFPADS*GGTLGA
Trigger: AGCCCCTAATGTTCCTCCCAAAGAGTCAGCTGGGAA...TGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTCTGCGGGCTCAACTTTaGGGGCCAAGGCTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPLRAQL*GPRLGP
Trigger: TGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCAG...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp ACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGGCAACTTCACTTTCATaGACTTGGGCACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: TQLITPWPFQDDAVHQRQATSLS*TWALQP
Trigger: AGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGC...CTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCAACTTCACTTTCATaGACTTGGGCACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: PLPGTSTQLITPWPFQDDATSLS*TWALQP
Trigger: AGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGC...ATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACGGCTGGAGGCACGCTTTTGCAACTTCACTTTCATaGACTTGGGCACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: KQEVVSRMACPHGWRHAFATSLS*TWALQP
Trigger: AGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGC...AAAAGCGTGCCTCCAGCCGTGGGGACAGGCCATCCTACTGACTACCTCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACATCCAGTACAGCCATTaGCCACGAAGCACTGACCTC +
Preference number: 5 (lower is better)
Translates to: NSMSCQDVHRTQPATARDIQYSH*PRSTDL
Trigger: GAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGAT...GTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCGAAGGTCAGCTTATACCGAAGCCGCACCTTCTCCTTCAGTGGATTGGCCAGCCTTTCATTGATAGGCTaGATCGATTCCAGGGGCACG +
Preference number: 5 (lower is better)
Translates to: AKVSLYRSRTFSFSGLASLSLIG*IDSRGT
Trigger: CGTGCCCCTGGAATCGATCAAGCCTATCAATGAAAG...GCTGGCCAATCCACTGAAGGAGAAGGTGCGGCTTCGGTATAAGCTGACCTTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578773.1
CDS-3UTR CAA 90 bp CAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTAGTCCCTGTGGCCTGTTaGGTCATCCCGTTACCTCCA +
Preference number: 5 (lower is better)
Translates to: QQLNNLGLHFLRHPVPQVVPVAC*VIPLPP
Trigger: TGGAGGTAACGGGATGACCAAACAGGCCACAGGGAC...TACCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS-3UTR CAA 90 bp GGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGAGGTCCTTCAGTGGATaGGCCAGCAACATGACCTGG +
Preference number: 5 (lower is better)
Translates to: GPVMRPNSMSCQDVHRTQRSFSG*ASNMTW
Trigger: CCAGGTCATGTTGCTGGCCAATCCACTGAAGGACCT...CTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580646.5
CDS-3UTR CAA 90 bp TATCCACAGGAATTGGTGGGTCAGACTGCACTATGCCTGAAAGGGGACATGGCACAGGCTGTGGTTGCCTaGTCACCCCTCCTCATACAC +
Preference number: 5 (lower is better)
Translates to: YPQELVGQTALCLKGDMAQAVVA*SPLLIH
Trigger: GTGTATGAGGAGGGGTGACAAGGCAACCACAGCCTG...TGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR CAA 90 bp CATGTGGTAGGCGTCTTTGATCTTTGCTTCTTCTGGCAGGGCCATGGTCCAGCTGGATTGGTGGCTTTATaGAGCCAGGACTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: HVVGVFDLCFFWQGHGPAGLVAL*SQDSRL
Trigger: AAGCCTGGAGTCCTGGCTCAATAAAGCCACCAATCC...AGCTGGACCATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS-3UTR CAA 90 bp TCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATGCCTGAAAGGGGGATTGGTGGCTTTATaGAGCCAGGACTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: SASYPQELVGQTALCLKGGLVAL*SQDSRL
Trigger: AAGCCTGGAGTCCTGGCTCAATAAAGCCACCAATCC...CCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR CAA 90 bp TACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGCAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: YSSSITLVFTFSDTLSPRQSSWR*EGLVAL
Trigger: TAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTG...CCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000582376.1
ENST00000621870.4
CDS-3UTR CAA 90 bp CTTCAGCATGTGGTAGGCGTCTTTGATCTTTGCTTCTTCTGGCAGGGCCATGGTCAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: LQHVVGVFDLCFFWQGHGQSSWR*EGLVAL
Trigger: TAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTG...ACCATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATGCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000582376.1
ENST00000621870.4
CDS-3UTR CAA 90 bp TCTGGTGACTCAGCTCAAGTGTGGCCCGATCTCATCACCTCCAGACCCAACATCTCCTATCCACAGGAATaGGTGGGTCAGACTGCACTA +
Preference number: 5 (lower is better)
Translates to: SGDSAQVWPDLITSRPNISYPQE*VGQTAL
Trigger: TAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGA...GATGTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCAGCTTGGCTAAAAGCTaGGACTTCTCCTCATCATCA +
Preference number: 5 (lower is better)
Translates to: GGGEGISVLSTGIGGSDCSLAKS*DFSSSS
Trigger: TGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGCT...GCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584243.5
ENST00000621870.4
CDS-3UTR CAA 90 bp TGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGAGCTTGGCTAAAAGCTaGGACTTCTCCTCATCATCA +
Preference number: 5 (lower is better)
Translates to: CHCQGQAHNSSLRGHSRTSLAKS*DFSSSS
Trigger: TGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGCT...CGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGAACATGGTCTGTGCCACCTTCCTTTCCCCAGAGATGTCCGATTGCTGAGCTTGACTTGATGAGCTTGTaGGCCTCCTGCAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: GTWSVPPSFPQRCPIAELDLMSL*ASCRSS
Trigger: AGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTC...AAGCTCAGCAATCGGACATCTCTGGGGAAAGGAAGGTGGCACAGACCATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCACTGAGCAGTCTCACGTaGTTGTTAACTTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: QPATARDKHTTHHSVAIPLSSLT*LLTSSN
Trigger: GTTAGAGGAAGTTAACAACAACGTGAGACTGCTCAG...TGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGTGGTGGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCCTGAGCAGTCTCACGTaGTTGTTAACTTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: GGGEGISVLSTGIGGSDCLSSLT*LLTSSN
Trigger: GTTAGAGGAAGTTAACAACAACGTGAGACTGCTCAG...GCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CAA 90 bp GATGACCCGGGAGAGGTTGTCACTGGCTTGCAGGATGTCCCCCAAACTGTTATCCCCAAACTGTTATCATaGTCCTCAGTCTCACTGGCG +
Preference number: 5 (lower is better)
Translates to: DDPGEVVTGLQDVPQTVIPKLLS*SSVSLA
Trigger: CGCCAGTGAGACTGAGGACAATGATAACAGTTTGGG...GATAACAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGGGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp CCGGGAGAGGTTGTCACTGGCTTGCAGGATGTCCCCCAAACTGTTATCATTGTCGTCGATGAGCGTGCCTaGGTTACTGCACTGACTGTT +
Preference number: 5 (lower is better)
Translates to: PGEVVTGLQDVPQTVIIVVDERA*VTALTV
Trigger: AACAGTCAGTGCAGTAACCAAGGCACGCTCATCGAC...GACAATGATAACAGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCGTCGATGAGCGTGCCTaGGTTACTGCACTGACTGTT +
Preference number: 5 (lower is better)
Translates to: VMRPNSMSCQDVHRTQPAVDERA*VTALTV
Trigger: AACAGTCAGTGCAGTAACCAAGGCACGCTCATCGAC...GGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGCTGCGGGCTCAACTTTaGGGGCCAAGGCTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: STLGHMSSVTFVILRPPVLRAQL*GPRLGP
Trigger: TGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCAG...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTTTCACTTTCATTGACTaGGGCACTGCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQAFTFID*GTAACS
Trigger: GCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAA...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGAGAGGGGATCAGCGTCCTATCCACAGGAATTGGTGGGTCAGACTGCACTATGGCAACTTCACTTTCATaGACTTGGGCACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: GEGISVLSTGIGGSDCTMATSLS*TWALQP
Trigger: AGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGC...CATAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGACGCTGATCCCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CAA 90 bp ACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCCACCAGAGGCAGTATCACAGCAGCAGTTaGGTTCTCAGCAGAAATGCC +
Preference number: 5 (lower is better)
Translates to: TQLITPWPFQDDAVHQRQYHSSS*VLSRNA
Trigger: GGCATTTCTGCTGAGAACCAAACTGCTGCTGTGATA...CTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTATCACAGCAGCAGTTaGGTTCTCAGCAGAAATGCC +
Preference number: 5 (lower is better)
Translates to: CQGQAHNSSLRGHSRTMLYHSSS*VLSRNA
Trigger: GGCATTTCTGCTGAGAACCAAACTGCTGCTGTGATA...CAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGGCAGGGCTGGGGACTTaGCAGTATGCCAGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: PSVAGEQLRFLGSTLGHMAGLGT*QYASSL
Trigger: TAAGGAACTGGCATACTGCAAAGTCCCCAGCCCTGC...CATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACATTTTGTGACGGAGGCTaGGAGTACATGTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: RLGVHVPGSHPAARVAGTFCDGG*EYMSQD
Trigger: ATCCTGGGACATGTACTCCAAGCCTCCGTCACAAAA...TGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTAGCAGTGAAACCTGCTaGCTAAAGACAGCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVSSETC*LKTARG
Trigger: GCCCCTCGCTGTCTTTAGCAAGCAGGTTTCACTGCT...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGAGCAGTGAAACCTGCTaGCTAAAGACAGCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: PSVAGEQLRFLGSTLGHMSSETC*LKTARG
Trigger: GCCCCTCGCTGTCTTTAGCAAGCAGGTTTCACTGCT...CATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS TCA 90 bp AGGATGTCCCCTGGAGCAGGAAAGAGAGACTTCTCACTCCTGTTGTaGCAGTTCCCACCCACATATCCAAATGCCTGGCTTATCCCTGAC +
Preference number: 5 (lower is better)
Translates to: RMSPGAGKRDFSLLL*QFPPTYPNAWLIPD
Trigger: GTCAGGGATAAGCCAGGCATTTGGATATGTGGGTGGGAACTGTCACAACAGGAGTGAGAAGTCTCTCTTTCCTGCTCCAGGGGACATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578896.1
ENST00000582232.1
CDS GCA 90 bp TTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCCATGTCCTaGCAAGATGTCCATAGGACACAGCCTGCCACTTCAGTGGATTGG +
Preference number: 5 (lower is better)
Translates to: FLSLVGPVMRPNSMS*QDVHRTQPATSVDW
Trigger: CCAATCCACTGAAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582486.5
CDS CCA 90 bp GTAGATAAAAACAGGTCCTTCAGTGGATTGGCCAGCAACATGACCTaGGTGATGGCTGCAGGTGGCTGGATGGGGCTAAATGGAGAGAGT +
Preference number: 5 (lower is better)
Translates to: VDKNRSFSGLASNMT*VMAAGGWMGLNGES
Trigger: ACTCTCTCCATTTAGCCCCATCCAGCCACCTGCAGCCATCACCCAGGTCATGTTGCTGGCCAATCCACTGAAGGACCTGTTTTTATCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580646.5
CDS-3UTR CAA 90 bp TACAGCAGCTCAATAACCTTGGTCTTCACTTTCTCAGACACCCTGTCCCCCAGGTGGCGGTTGGAAGGATaGGTGGCTTTATTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: YSSSITLVFTFSDTLSPRWRLEG*VALLSQ
Trigger: CTGGCTCAATAAAGCCACCAATCCTTCCAACCGCCA...CCTGGGGGACAGGGTGTCTGAGAAAGTGAAGACCAAGGTTATTGAGCTGCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS-3UTR CAA 90 bp CCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTGGCGGTTGGAAGGATaGGTGGCTTTATTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PSVAGEQLRFLGSTLGHMWRLEG*VALLSQ
Trigger: CTGGCTCAATAAAGCCACCAATCCTTCCAACCGCCA...CATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TGTCCTGCCAAGATGTCCATAGGACACAGCCTGCCACTGCCAGGGACAAGCACAAGCTTGGCTAAAAGCTaGGACTTCTCCTCATCATCA +
Preference number: 5 (lower is better)
Translates to: CPAKMSIGHSLPLPGTSTSLAKS*DFSSSS
Trigger: TGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGCT...TGTGCTTGTCCCTGGCAGTGGCAGGCTGTGTCCTATGGACATCTTGGCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp ACACAGCCTGCCACTGCCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTAGCTTGGCTAAAAGCTaGGACTTCTCCTCATCATCA +
Preference number: 5 (lower is better)
Translates to: TQPATARDKHTTHHSVAISLAKS*DFSSSS
Trigger: TGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGCT...AATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAGGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TTGTTCACCTGGGCTCCGCAAGCTTCCCCCGTGTCTATGGCAGCTGGTGATTTTAGGTCATCTGGGTTTTaGCTTTTCAGCAGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LFTWAPQASPVSMAAGDFRSSGF*LFSSLA
Trigger: AGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACCT...AAAATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCAGGGACAAGCACACAACTCATCACTCCGTGGCCATTCCAGGACGATGCTGTCAGCAGTCTCACGTTGTaGTTAACTTCCTCTAACGTG +
Preference number: 5 (lower is better)
Translates to: PGTSTQLITPWPFQDDAVSSLTL*LTSSNV
Trigger: CACGTTAGAGGAAGTTAACAACAACGTGAGACTGCT...GACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCACGGAGGACAAACTGTaGGTCGTGTCCAGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFTEDKL*VVSSSA
Trigger: TGCGGAGCTGGACACGACCAACAGTTTGTCCTCCGT...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGCTGCGGGCTCAACTTTaGGGGCCAAGGCTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: QLRFLGSTLGHMSSVTFVLRAQL*GPRLGP
Trigger: TGGCCCCAGCCTTGGCCCCAAAAGTTGAGCCCGCAG...CACAAATGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATAGGGCACTGCTAGGCTaGATCGATTCCAGGGGCACG +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYRALLG*IDSRGT
Trigger: CGTGCCCCTGGAATCGATCAAGCCTAGCAGTGCCCT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCTGCAGCACGATGCTCTaGACAGGTAAGGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: DSSLFHAKQEVVSRMACPCSTML*TGKGAV
Trigger: CACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCA...GGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTTCACTTTCATTGACTaGGGCACTGCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVFTFID*GTAACS
Trigger: GCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAA...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACAGCAGTGAAACCTGCTaGCTAAAGACAGCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: LRTPDSIWPLQVTQVDKNSSETC*LKTARG
Trigger: GCCCCTCGCTGTCTTTAGCAAGCAGGTTTCACTGCT...GTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCCAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFQSSWR*EGLVAL
Trigger: TAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTG...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TCCACAGGAATTGGTGGGTCAGACTGCACTATGCCTGAAAGGGGACATGGCAGCTTGCTTTTCAGCAGCTaGGCTAAAAGCTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: STGIGGSDCTMPERGHGSLLFSS*AKSLDF
Trigger: GAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCAA...GCTGCCATGTCCCCTTTCAGGCATAGTGCAGTCTGACCCACCAATTCCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS-3UTR CAA 90 bp AGGCTTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACACTGAGCAGTCTCACGTaGTTGTTAACTTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: RLGVHVPGSHPAARVAGTLSSLT*LLTSSN
Trigger: GTTAGAGGAAGTTAACAACAACGTGAGACTGCTCAG...TGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATACGGAGGACAAACTGTaGGTCGTGTCCAGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYTEDKL*VVSSSA
Trigger: TGCGGAGCTGGACACGACCAACAGTTTGTCCTCCGT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTGCAGCACGATGCTCTaGACAGGTAAGGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYCSTML*TGKGAV
Trigger: CACGGCTCCCTTACCTGTCAAGAGCATCGTGCTGCA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GAGAGTTCTGTCCCAGAAGGTGGCTGCAACTTCACTTTCATTGACTTGGGCACTTTCACTTTCATTGACTaGGGCACTGCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ESSVPEGGCNFTFIDLGTFTFID*GTAACS
Trigger: GCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAA...AGTGCCCAAGTCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000584550.1
ENST00000621217.4
ENST00000621870.4
CDS-3UTR CAA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTGCAACTTCACTTTCATaGACTTGGGCACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVATSLS*TWALQP
Trigger: AGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGC...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCAAGCACTGTTGAAGCAATAGGGTCTGGTGACTCAGCTCAAGTGTGGCCCGATTATCACAGCAGCAGTTaGGTTCTCAGCAGAAATGCC +
Preference number: 5 (lower is better)
Translates to: PSTVEAIGSGDSAQVWPDYHSSS*VLSRNA
Trigger: GGCATTTCTGCTGAGAACCAAACTGCTGCTGTGATA...ATCGGGCCACACTTGAGCTGAGTCACCAGACCCTATTGCTTCAACAGTGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GTTGGGCCTGTCATGAGGCCAAATTCCATGTCCTGCCAAGATGTCCATAGGACATTTTGTGACGGAGGCTaGGAGTACATGTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: VGPVMRPNSMSCQDVHRTFCDGG*EYMSQD
Trigger: ATCCTGGGACATGTACTCCAAGCCTCCGTCACAAAA...TGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCTAAAGACAGCGAGGGGCAGGGAAGGGATATGACCTCTTCCCATAGTAAGGAATTTTGTGACGGAGGCTaGGAGTACATGTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: AKDSEGQGRDMTSSHSKEFCDGG*EYMSQD
Trigger: ATCCTGGGACATGTACTCCAAGCCTCCGTCACAAAA...TTCCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCCCCTCGCTGTCTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATGTCCGATTGCTGAGCTaGTTCACCTGGGCTCCGCAA +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYVRLLS*FTWAPQ
Trigger: TTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGAC...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCGGATTGGTGGCTTTATaGAGCCAGGACTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFGLVAL*SQDSRL
Trigger: AAGCCTGGAGTCCTGGCTCAATAAAGCCACCAATCC...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGTGGCGGTTGGAAGGATaGGTGGCTTTATTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQEWRLEG*VALLSQ
Trigger: CTGGCTCAATAAAGCCACCAATCCTTCCAACCGCCA...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TTGGAGTACATGTCCCAGGATCACATCCAGCAGCTAGAGTGGCTGGGACAAGCTTTGCTTTTCAGCAGCTaGGCTAAAAGCTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: LEYMSQDHIQQLEWLGQALLFSS*AKSLDF
Trigger: GAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCAA...AGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGAGGTTGTCACTGGCTaGCAGGATGTCCCCCAAACT +
Preference number: 5 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPEVVTG*QDVPQT
Trigger: AGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTC...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAGCCACCTCGCCATaGATGACCTGCCCTTCAATA +
Preference number: 5 (lower is better)
Translates to: VAGEQLRFLGSTLGHMSSVATSP*MTCPSI
Trigger: TATTGAAGGGCAGGTCATCAATGGCGAGGTGGCTAC...ACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCTTCTCCTTCAGTGGATaGGCCAGCAACATGACCTGG +
Preference number: 5 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFFSFSG*ASNMTW
Trigger: CCAGGTCATGTTGCTGGCCAATCCACTGAAGGAGAA...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CTCCGCACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACTTTTGTGACGGAGGCTaGGAGTACATGTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: LRTPDSIWPLQVTQVDKNFCDGG*EYMSQD
Trigger: ATCCTGGGACATGTACTCCAAGCCTCCGTCACAAAA...GTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGTGCGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp TGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCATCCAGTACAGCCATTaGCCACGAAGCACTGACCTC +
Preference number: 5 (lower is better)
Translates to: CRVAVDSKGRIAVYFMPSIQYSH*PRSTDL
Trigger: GAGGTCAGTGCTTCGTGGCAAATGGCTGTACTGGAT...GCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS TCA 90 bp GTTGTGACAGTTCCCACCCACATATCCAAATGCCTGGCTTATCCCTaGCCGTCGCTCTTTCACTCACCCAAACTGTTATCATTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VVTVPTHISKCLAYP*PSLFHSPKLLSLSS
Trigger: TGAGGACAATGATAACAGTTTGGGTGAGTGAAAGAGCGACGGTCAGGGATAAGCCAGGCATTTGGATATGTGGGTGGGAACTGTCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578896.1
ENST00000582232.1
CDS-3UTR CAA 90 bp AGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTCAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: RFQGEDSSLFHAKQEVVSQSSWR*EGLVAL
Trigger: TAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTG...ACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGCAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: STLGHMSSVTFVILRPPVQSSWR*EGLVAL
Trigger: TAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTG...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCTAAAGACAGCGAGGGGCAGGGAAGGGATATGACCTCTTCCCATAGTAAGGAATTGCTTTTCAGCAGCTaGGCTAAAAGCTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: AKDSEGQGRDMTSSHSKELLFSS*AKSLDF
Trigger: GAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCAA...TTCCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCCCCTCGCTGTCTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CTTCAGCATGTGGTAGGCGTCTTTGATCTTTGCTTCTTCTGGCAGGGCCATGGTTTGCTTTTCAGCAGCTaGGCTAAAAGCTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: LQHVVGVFDLCFFWQGHGLLFSS*AKSLDF
Trigger: GAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCAA...ACCATGGCCCTGCCAGAAGAAGCAAAGATCAAAGACGCCTACCACATGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621870.4
CDS-3UTR CAA 90 bp AGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCCACAGGTCATCTGGGTTTTaGCTTTTCAGCAGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: SSLFHAKQEVVSRMACPHRSSGF*LFSSLA
Trigger: AGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACCT...GTGGGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATATGGACTTGATGAGCTaGTTGGCCTCCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYMDLMS*LASCRS
Trigger: TGACCTGCAGGAGGCCAACAAGCTCATCAAGTCCAT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTCCTTCACCATGGACTaGATGAGCTTGTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYSFTMD*MSLLAS
Trigger: GGAGGCCAACAAGCTCATCAAGTCCATGGTGAAGGA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGAACGTGTGCAGACGCTaGGTCACCTTCTGGATCCGT +
Preference number: 5 (lower is better)
Translates to: STLGHMSSVTFVILRPPVNVCRR*VTFWIR
Trigger: ACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTT...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CCCTCAGTAGCTGGGGAACAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGAGCAGTCTCACGTTGTaGTTAACTTCCTCTAACGTG +
Preference number: 5 (lower is better)
Translates to: PSVAGEQLRFLGSTLGHMSSLTL*LTSSNV
Trigger: CACGTTAGAGGAAGTTAACAACAACGTGAGACTGCT...CATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCTAAAGACAGCGAGGGGCAGGGAAGGGATATGACCTCTTCCCATAGTAAGGAAAGCAGTCTCACGTTGTaGTTAACTTCCTCTAACGTG +
Preference number: 5 (lower is better)
Translates to: AKDSEGQGRDMTSSHSKESSLTL*LTSSNV
Trigger: CACGTTAGAGGAAGTTAACAACAACGTGAGACTGCT...TTCCTTACTATGGGAAGAGGTCATATCCCTTCCCTGCCCCTCGCTGTCTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTAGCCACCTCGCCATaGATGACCTGCCCTTCAATA +
Preference number: 5 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPVATSP*MTCPSI
Trigger: TATTGAAGGGCAGGTCATCAATGGCGAGGTGGCTAC...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATGTCGATGAGCGTGCCTaGGTTACTGCACTGACTGTT +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYVDERA*VTALTV
Trigger: AACAGTCAGTGCAGTAACCAAGGCACGCTCATCGAC...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTTTCCCAGCTGACTCTTaGGGAGGAACATTAGGGGCT +
Preference number: 5 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPFPADS*GGTLGA
Trigger: AGCCCCTAATGTTCCTCCCAAAGAGTCAGCTGGGAA...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GAGGATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTTTCACTTTCATTGACTaGGGCACTGCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: EDSSLFHAKQEVVSRMACFTFID*GTAACS
Trigger: GCTGCAGGCTGCAGTGCCCAAGTCAATGAAAGTGAA...ACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCGCAACTTCACTTTCATaGACTTGGGCACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFATSLS*TWALQP
Trigger: AGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGC...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000580646.5
ENST00000583282.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp ACCCCTGACAGCATATGGCCACTTCAAGTCACACAGGTAGATAAAAACAGGTCCTTTTGTGACGGAGGCTaGGAGTACATGTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: TPDSIWPLQVTQVDKNRSFCDGG*EYMSQD
Trigger: ATCCTGGGACATGTACTCCAAGCCTCCGTCACAAAA...GGACCTGTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATACTTTACCCGCCTGCTaGGGGAATGTCCTCCTACTT +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYTLPAC*GNVLLL
Trigger: AAGTAGGAGGACATTCCCCAAGCAGGCGGGTAAAGT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578348.5
CDS-3UTR CAA 90 bp GCCAAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTTGCTTTTCAGCAGCTaGGCTAAAAGCCTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: AKAVGCRVAVDSKGRIAVLLFSS*AKSLSL
Trigger: AAGAGACAGGCTTTTAGCCAAGCTGCTGAAAAGCAA...AACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000621217.4
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTCCTATCCACAGGAATaGGTGGGTCAGACTGCACTA +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYSYPQE*VGQTAL
Trigger: TAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GCTCTCTTCATTTTCCTTCCTATCCCTAGTTGGGCCTGTCATGAGGCCAAATTCAGGTCATCTGGGTTTTaGCTTTTCAGCAGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ALFIFLPIPSWACHEAKFRSSGF*LFSSLA
Trigger: AGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACCT...GAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGGACTTGATGAGCTTGTaGGCCTCCTGCAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: STLGHMSSVTFVILRPPVDLMSL*ASCRSS
Trigger: AGATGACCTGCAGGAGGCCAACAAGCTCATCAAGTC...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGAACGTGTGCAGACGCTaGGTCACCTTCTGGATCCGT +
Preference number: 5 (lower is better)
Translates to: QLRFLGSTLGHMSSVTFVNVCRR*VTFWIR
Trigger: ACGGATCCAGAAGGTGACCAAGCGTCTGCACACGTT...CACAAATGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATCCCAAACTGTTATCATaGTCCTCAGTCTCACTGGCG +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYPKLLS*SSVSLA
Trigger: CGCCAGTGAGACTGAGGACAATGATAACAGTTTGGG...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp CAGTTGAGGTTTCTGGGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGGAGGTTGTCACTGGCTaGCAGGATGTCCCCCAAACT +
Preference number: 5 (lower is better)
Translates to: QLRFLGSTLGHMSSVTFVEVVTG*QDVPQT
Trigger: AGTTTGGGGGACATCCTGCAAGCCAGTGACAACCTC...CACAAATGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGGTAGCCACCTCGCCATaGATGACCTGCCCTTCAATA +
Preference number: 5 (lower is better)
Translates to: STLGHMSSVTFVILRPPVVATSP*MTCPSI
Trigger: TATTGAAGGGCAGGTCATCAATGGCGAGGTGGCTAC...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGTGCTTCTTCAGTGGATaGGCCAGCAACATGACCTGG +
Preference number: 5 (lower is better)
Translates to: STLGHMSSVTFVILRPPVCFFSG*ASNMTW
Trigger: CCAGGTCATGTTGCTGGCCAATCCACTGAAGAAGCA...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578348.5
CDS-3UTR CAA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGTCCTATCCACAGGAATaGGTGGGTCAGACTGCACTA +
Preference number: 5 (lower is better)
Translates to: STLGHMSSVTFVILRPPVSYPQE*VGQTAL
Trigger: TAGTGCAGTCTGACCCACCAATTCCTGTGGATAGGA...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTAGGTCATCTGGGTTTTaGCTTTTCAGCAGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPRSSGF*LFSSLA
Trigger: AGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACCT...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATAGGTCATCTGGGTTTTaGCTTTTCAGCAGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYRSSGF*LFSSLA
Trigger: AGCCAAGCTGCTGAAAAGCAAAAACCCAGATGACCT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GATAGCAGTTTATTTCATGCCAAGCAAGAGGTAGTCAGTAGGATGGCCTGTCCCAGCAGTCTCACGTTGTaGTTAACTTCCTCTAACGTG +
Preference number: 5 (lower is better)
Translates to: DSSLFHAKQEVVSRMACPSSLTL*LTSSNV
Trigger: CACGTTAGAGGAAGTTAACAACAACGTGAGACTGCT...GGGACAGGCCATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582486.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTCATGCCAAGCAAGAGCTGAGCAGTCTCACGTaGTTGTTAACTTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: SGGRFQGEDSSLFHAKQELSSLT*LLTSSN
Trigger: GTTAGAGGAAGTTAACAACAACGTGAGACTGCTCAG...CTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTGTGGCAACTTCACTTTCATaGACTTGGGCACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: STLGHMSSVTFVILRPPVATSLS*TWALQP
Trigger: AGGCTGCAGTGCCCAAGTCAATGAAAGTGAAGTTGC...CACAGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTATCACAGCAGCAGTTaGGTTCTCAGCAGAAATGCC +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYYHSSS*VLSRNA
Trigger: GGCATTTCTGCTGAGAACCAAACTGCTGCTGTGATA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS CCA 90 bp TCTGATCACAGAAGCCAATTATGTATTCCCAGTCCTCCTGGCGGTTaGAAGGATTGGTGGCTTTATCAGCTGGATGAACACATCATAACA +
Preference number: 5 (lower is better)
Translates to: SDHRSQLCIPSPPGG*KDWWLYQLDEHIIT
Trigger: TGTTATGATGTGTTCATCCAGCTGATAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTGGGAATACATAATTGGCTTCTGTGATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000579743.2
ENST00000621870.4
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATAGCTTGGCTAAAAGCTaGGACTTCTCCTCATCATCA +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYSLAKS*DFSSSS
Trigger: TGATGATGAGGAGAAGTCCAAGCTTTTAGCCAAGCT...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp AAAGCAGTAGGATGTAGAGTGGCGGTAGATTCCAAGGGGAGGATAGCAGTTTATTTGCTTTTCAGCAGCTaGGCTAAAAGCTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: KAVGCRVAVDSKGRIAVYLLFSS*AKSLDF
Trigger: GAAGTCCAAGCTTTTAGCCAAGCTGCTGAAAAGCAA...ATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTAGCAGTCTCACGTTGTaGTTAACTTCCTCTAACGTG +
Preference number: 5 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPSSLTL*LTSSNV
Trigger: CACGTTAGAGGAAGTTAACAACAACGTGAGACTGCT...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS-3UTR CAA 90 bp GGCAGCACATTAGGACATATGTCTAGTGTAACATTTGTGATCCTGAGGCCTCCTCTGAGCAGTCTCACGTaGTTGTTAACTTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: GSTLGHMSSVTFVILRPPLSSLT*LLTSSN
Trigger: GTTAGAGGAAGTTAACAACAACGTGAGACTGCTCAG...AGGAGGCCTCAGGATCACAAATGTTACACTAGACATATGTCCTAATGTGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000578348.5
ENST00000621217.4
ENST00000621870.4
ENST00000649398.1
CDS TCA 90 bp GACTCGGACATAAAAATCAAACCACAAAGGCCCTTAGAGATCATCTaGTTCATTCAGGGTTCATGCCCAGAAAATGACCGGGATATGCCA +
Preference number: 5 (lower is better)
Translates to: DSDIKIKPQRPLEII*FIQGSCPENDRDMP
Trigger: TGGCATATCCCGGTCATTTTCTGGGCATGAACCCTGAATGAATCAGATGATCTCTAAGGGCCTTTGTGGTTTGATTTTTATGTCCGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613421.4
CDS GCA 72 bp GCAGAGGGAAGGCCCGTGGCACCCAGTGTATCACCCTaGTTCCCAGGTCGGGGCTCGGCCTCCCCGGCAGTG +
Preference number: 6 (lower is better)
Translates to: AEGRPVAPSVSP*FPGRGSASPAV
Trigger: CACTGCCGGGGAGGCCGAGCCCCGACCTGGGAAGCAGGGTGATACACTGGGTGCCACGGGCCTTCCCTCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000579743.2
ENST00000621870.4
CDS GCA 72 bp GCCTGCCGCTGGAACGGGGCGCAGCCCTCCAAGGACTaGACGGAAGACAGCCCCGGAGGCACTCATTGTTCC +
Preference number: 6 (lower is better)
Translates to: ACRWNGAQPSKD*TEDSPGGTHCS
Trigger: GGAACAATGAGTGCCTCCGGGGCTGTCTTCCGTGCAGTCCTTGGAGGGCTGCGCCCCGTTCCAGCGGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS CAA 72 bp GCTCCTGAAGGGCAGCGCAGCCCCGGGAGGCAGCCTTaGCCGTCGGCGGTCCCACCTTCATCAGCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: APEGQRSPGRQP*PSAVPPSSALC
Trigger: ACAGAGAGCTGATGAAGGTGGGACCGCCGACGGCAAAGGCTGCCTCCCGGGGCTGCGCTGCCCTTCAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582821.5
ENST00000613421.4
CDS TCA 72 bp CGGAGGCGCCACAGGCAGCGGTCCCCGGCCTGGGGCTaGAGAAGTCCAGGTCGGACTGTTCCCTCTATGAAC +
Preference number: 6 (lower is better)
Translates to: RRRHRQRSPAWG*RSPGRTVPSMN
Trigger: GTTCATAGAGGGAACAGTCCGACCTGGACTTCTTCAGCCCCAGGCCGGGGACCGCTGCCTGTGGCGCCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS CAA 90 bp GCAGCCCTCCAAGGACTGCACGGAAGACAGCCCCGGAGGCACTCATaGTTCCCCGCTGCAGCTGGCACGCTCTGGAGGGAAGGACAGCTA +
Preference number: 6 (lower is better)
Translates to: AALQGLHGRQPRRHS*FPAAAGTLWREGQL
Trigger: TAGCTGTCCTTCCCTCCAGAGCGTGCCAGCTGCAGCGGGGAACAATGAGTGCCTCCGGGGCTGTCTTCCGTGCAGTCCTTGGAGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS TCA 72 bp TCCAGCTCCTTCACTGGCAACAGGGCTGCAGGGATCTaGGTAGCGACAGCTGCCAGGCAGAGGGAAGGCCCG +
Preference number: 6 (lower is better)
Translates to: SSSFTGNRAAGI*VATAARQREGP
Trigger: CGGGCCTTCCCTCTGCCTGGCAGCTGTCGCTACTCAGATCCCTGCAGCCCTGTTGCCAGTGAAGGAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000579743.2
ENST00000621870.4
CDS GCA 72 bp TGGCAACAGGGCTGCAGGGATCTGAGTAGCGACAGCTaGCAGGCAGAGGGAAGGCCCGTGGCACCCAGTGTA +
Preference number: 6 (lower is better)
Translates to: WQQGCRDLSSDS*QAEGRPVAPSV
Trigger: TACACTGGGTGCCACGGGCCTTCCCTCTGCCTGGCAGCTGTCGCTACTCAGATCCCTGCAGCCCTGTTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000579743.2
ENST00000621870.4
CDS GCA 72 bp CGGAAGACAGCCCCGGAGGCACTCATTGTTCCCCGCTaGAGCTGGCACGCTCTGGAGGGAAGGACAGCTAAC +
Preference number: 6 (lower is better)
Translates to: RKTAPEALIVPR*SWHALEGRTAN
Trigger: GTTAGCTGTCCTTCCCTCCAGAGCGTGCCAGCTGCAGCGGGGAACAATGAGTGCCTCCGGGGCTGTCTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS CCA 72 bp ACAGCCCCGGAGGCACTCATTGTTCCCCGCTGCAGCTaGCACGCTCTGGAGGGAAGGACAGCTAACTGCAGC +
Preference number: 6 (lower is better)
Translates to: TAPEALIVPRCS*HALEGRTANCS
Trigger: GCTGCAGTTAGCTGTCCTTCCCTCCAGAGCGTGCCAGCTGCAGCGGGGAACAATGAGTGCCTCCGGGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS CAA 72 bp CAAGGACTGCACGGAAGACAGCCCCGGAGGCACTCATaGTTCCCCGCTGCAGCTGGCACGCTCTGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: QGLHGRQPRRHS*FPAAAGTLWRE
Trigger: TTCCCTCCAGAGCGTGCCAGCTGCAGCGGGGAACAATGAGTGCCTCCGGGGCTGTCTTCCGTGCAGTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS GCA 72 bp GAGGTCCTTGGCACAGTAGTGCTGTCACCGATCCTGTaGCCCTACCTGGAGCAGGTGCCACTGGCTGTTCCC +
Preference number: 6 (lower is better)
Translates to: EVLGTVVLSPIL*PYLEQVPLAVP
Trigger: GGGAACAGCCAGTGGCACCTGCTCCAGGTAGGGGCACAGGATCGGTGACAGCACTACTGTGCCAAGGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS CCA 72 bp TTATTCTGGGCCAGGCACCTTCCTGGGCCACCTCCCTaGGGATGGCAGCAGGAGCTTCAGTGGATTGGCCAG +
Preference number: 6 (lower is better)
Translates to: LFWARHLPGPPP*GWQQELQWIGQ
Trigger: CTGGCCAATCCACTGAAGCTCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583282.5
CDS CAA 72 bp GGACATGGCAGCACGTGCACTCAGGCTGTGGTTGCCTaGTCACCCCTCCTCATACACCAAGGGCCACGTCCC +
Preference number: 6 (lower is better)
Translates to: GHGSTCTQAVVA*SPLLIHQGPRP
Trigger: GGGACGTGGCCCTTGGTGTATGAGGAGGGGTGACAAGGCAACCACAGCCTGAGTGCACGTGCTGCCATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS CAA 90 bp TCCTGTGACAGAGGGCAGCAAGTGAGATCCAGCCCAGGCGGCCCCTaGGCAGGACGCCCTCTATTCTGCTACCCTCTCTGTGCTAGAGGA +
Preference number: 6 (lower is better)
Translates to: SCDRGQQVRSSPGGP*AGRPLFCYPLCARG
Trigger: TCCTCTAGCACAGAGAGGGTAGCAGAATAGAGGGCGTCCTGCCAAGGGGCCGCCTGGGCTGGATCTCACTTGCTGCCCTCTGTCACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578208.1
CDS CAA 90 bp GCCCCTACCTGGAGCAGGTGCCACTGGCTGTTCCCAGCTGACTCTTaGGGAGGAACATTAGGGGCTGGGTCGGCGAGGCCTGACAATAGA +
Preference number: 6 (lower is better)
Translates to: APTWSRCHWLFPADS*GGTLGAGSARPDNR
Trigger: TCTATTGTCAGGCCTCGCCGACCCAGCCCCTAATGTTCCTCCCAAAGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCAGGTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS CCA 72 bp ACACCCTGGACAAGTCAGCTGATCCCAGGAGGCAAATaGGGACGCCACCCTCTACTGACGTGGCTGCTGTGC +
Preference number: 6 (lower is better)
Translates to: TPWTSQLIPGGK*GRHPLLTWLLC
Trigger: GCACAGCAGCCACGTCAGTAGAGGGTGGCGTCCCCATTTGCCTCCTGGGATCAGCTGACTTGTCCAGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582821.5
ENST00000613421.4
CDS CCA 72 bp AGGCACTCATTGTTCCCCGCTGCAGCTGGCACGCTCTaGAGGGAAGGACAGCTAACTGCAGCCCAGGAGACA +
Preference number: 6 (lower is better)
Translates to: RHSLFPAAAGTL*REGQLTAAQET
Trigger: TGTCTCCTGGGCTGCAGTTAGCTGTCCTTCCCTCCAGAGCGTGCCAGCTGCAGCGGGGAACAATGAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS CCA 72 bp GGTAGTGGGTTTCACCAAGCCCGAGGTCCTGGGAGGTaGGAAGGATGGAAAGCACGTCAGAGAGCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: GSGFHQARGPGR*EGWKARQRASQ
Trigger: CTGGCTGGCTCTCTGACGTGCTTTCCATCCTTCCCACCTCCCAGGACCTCGGGCTTGGTGAAACCCACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614198.4
CDS CAA 72 bp AAGGCCCCTGACCATGCTCTTACCCAGGCCCACCCCTaGCCTTCCAGCCTGACTGATGGGACTACAAGGCAC +
Preference number: 6 (lower is better)
Translates to: KAPDHALTQAHP*PSSLTDGTTRH
Trigger: GTGCCTTGTAGTCCCATCAGTCAGGCTGGAAGGCAAGGGGTGGGCCTGGGTAAGAGCATGGTCAGGGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614198.4
CDS CAA 90 bp GGGCTGAGGGCGCTTCAGAAAAAGCTGCCGGTCCCTGTGGCCTGTTaGGTCATCCCGTTACCTCCAGGGCCTAGCTCTCTTTGGAGAGAC +
Preference number: 6 (lower is better)
Translates to: GLRALQKKLPVPVAC*VIPLPPGPSSLWRD
Trigger: GTCTCTCCAAAGAGAGCTAGGCCCTGGAGGTAACGGGATGACCAAACAGGCCACAGGGACCGGCAGCTTTTTCTGAAGCGCCCTCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582376.1
CDS TCA 72 bp GGGGCTGAAGAAGTCCAGGTCGGACTGTTCCCTCTATaGACAACAGAAAGGGTGGTGAGCCGAGGGCGGGTG +
Preference number: 6 (lower is better)
Translates to: GAEEVQVGLFPL*TTERVVSRGRV
Trigger: CACCCGCCCTCGGCTCACCACCCTTTCTGTTGTTCATAGAGGGAACAGTCCGACCTGGACTTCTTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS CCA 72 bp CTGAAAGGGGACATGGCAGCACGTGCACTCAGGCTGTaGTTGCCTTGTCACCCCTCCTCATACACCAAGGGC +
Preference number: 6 (lower is better)
Translates to: LKGDMAARALRL*LPCHPSSYTKG
Trigger: GCCCTTGGTGTATGAGGAGGGGTGACAAGGCAACCACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS CCA 72 bp CTGCCTGGCTTTAAGGGACCCCCTGCAAAGAGTGCCTaGATCCATCCCTGTCGCATGTCCTACAGCTCCGTG +
Preference number: 6 (lower is better)
Translates to: LPGFKGPPAKSA*IHPCRMSYSSV
Trigger: CACGGAGCTGTAGGACATGCGACAGGGATGGATCCAGGCACTCTTTGCAGGGGGTCCCTTAAAGCCAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614198.4
CDS CAA 90 bp CCTGAAAGGGGACATGGCAGCACGTGCACTCAGGCTGTGGTTGCCTaGTCACCCCTCCTCATACACCAAGGGCCACGTCCCTGTGATCAA +
Preference number: 6 (lower is better)
Translates to: PERGHGSTCTQAVVA*SPLLIHQGPRPCDQ
Trigger: TTGATCACAGGGACGTGGCCCTTGGTGTATGAGGAGGGGTGACAAGGCAACCACAGCCTGAGTGCACGTGCTGCCATGTCCCCTTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584243.5
CDS TCA 72 bp GTTTCCATCTGGCCCTTACACCCTGGACAAGTCAGCTaGTCCCAGGAGGCAAATGGGGACGCCACCCTCTAC +
Preference number: 6 (lower is better)
Translates to: VSIWPLHPGQVS*SQEANGDATLY
Trigger: GTAGAGGGTGGCGTCCCCATTTGCCTCCTGGGATCAGCTGACTTGTCCAGGGTGTAAGGGCCAGATGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582821.5
ENST00000613421.4
CDS GCA 72 bp GCGTTAGCACTTGACCAGGAGGAGACTTTACCCGCCTaGTTGGGGAATGTCCTCCTACTTGGGACAAGGGCC +
Preference number: 6 (lower is better)
Translates to: ALALDQEETLPA*LGNVLLLGTRA
Trigger: GGCCCTTGTCCCAAGTAGGAGGACATTCCCCAAGCAGGCGGGTAAAGTCTCCTCCTGGTCAAGTGCTAACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579743.2
CDS CCA 72 bp CACCGATCCTGTGCCCCTACCTGGAGCAGGTGCCACTaGCTGTTCCCAGCTGACTCTTTGGGAGGAACATTA +
Preference number: 6 (lower is better)
Translates to: HRSCAPTWSRCH*LFPADSLGGTL
Trigger: TAATGTTCCTCCCAAAGAGTCAGCTGGGAACAGCCAGTGGCACCTGCTCCAGGTAGGGGCACAGGATCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS TCA 72 bp TGGAGGGAAGGACAGCTAACTGCAGCCCAGGAGACATaGCGCTGGAAAGTGGAGGTCCTTGGCACAGTAGTG +
Preference number: 6 (lower is better)
Translates to: WREGQLTAAQET*RWKVEVLGTVV
Trigger: CACTACTGTGCCAAGGACCTCCACTTTCCAGCGTCATGTCTCCTGGGCTGCAGTTAGCTGTCCTTCCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613421.4
ENST00000614198.4
CDS TCA 72 bp TGTCACAGGAAGGGCACTGCCTGTAAGAACGTGACGTaGGTGTGGGAGGAGCAGCACCAGAGACACCCAACA +
Preference number: 6 (lower is better)
Translates to: CHRKGTACKNVT*VWEEQHQRHPT
Trigger: TGTTGGGTGTCTCTGGTGCTGCTCCTCCCACACTCACGTCACGTTCTTACAGGCAGTGCCCTTCCTGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614198.4
CDS GCA 72 bp TCGTTAGCACTTGACCAGGAGGAGACTTTACCCGCCTaGTTGGGGAATGTCCTCCTACTTGGGACAAGGGCC +
Preference number: 6 (lower is better)
Translates to: SLALDQEETLPA*LGNVLLLGTRA
Trigger: GGCCCTTGTCCCAAGTAGGAGGACATTCCCCAAGCAGGCGGGTAAAGTCTCCTCCTGGTCAAGTGCTAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578348.5
ENST00000582486.5
ENST00000582717.5
CDS CCA 72 bp GAGTCAGACTCAGGTTTCCATCTGGCCCTTACACCCTaGACAAGTCAGCTGATCCCAGGAGGCAAATGGGGA +
Preference number: 6 (lower is better)
Translates to: ESDSGFHLALTP*TSQLIPGGKWG
Trigger: TCCCCATTTGCCTCCTGGGATCAGCTGACTTGTCCAGGGTGTAAGGGCCAGATGGAAACCTGAGTCTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582821.5
ENST00000613421.4
CDS CAA 72 bp GTAAGAGTTGATGACCCGGGAGAGGTTGTCACTGGCTaGCAGGATGTCCCCTGGAGCAGGAAAGAGAGACTT +
Preference number: 6 (lower is better)
Translates to: VRVDDPGEVVTG*QDVPWSRKERL
Trigger: AAGTCTCTCTTTCCTGCTCCAGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGGGTCATCAACTCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578896.1
ENST00000582232.1
CDS CCA 72 bp TCAGCAACCCCACATCTCCTCCCACTCATTACACTTTaGCCTCTTCTAGAAGCTGATCGAGGGCATCCAGGT +
Preference number: 6 (lower is better)
Translates to: SATPHLLPLITL*PLLEADRGHPG
Trigger: ACCTGGATGCCCTCGATCAGCTTCTAGAAGAGGCCAAAGTGTAATGAGTGGGAGGAGATGTGGGGTTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614198.4
CDS CCA 72 bp GTGGTCATGATGAGTCCAGTGCTTCCTAACGGAATCTaGGAGAGGCGCTCAGTGAGGAGCTTAAGACTGAGA +
Preference number: 6 (lower is better)
Translates to: VVMMSPVLPNGI*ERRSVRSLRLR
Trigger: TCTCAGTCTTAAGCTCCTCACTGAGCGCCTCTCCCAGATTCCGTTAGGAAGCACTGGACTCATCATGACCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614198.4
CDS TCA 72 bp CCTGGAGCAGGAAAGAGAGACTTCTCACTCCTGTTGTaGCAGTTCCCACCCACATATCCAAATGCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: PGAGKRDFSLLL*QFPPTYPNAWL
Trigger: AAGCCAGGCATTTGGATATGTGGGTGGGAACTGTCACAACAGGAGTGAGAAGTCTCTCTTTCCTGCTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578896.1
ENST00000582232.1
CDS CAA 72 bp ATTATGTATTCCCAGTCCTCCTGGCGGTTGGAAGGATaGGTGGCTTTATTGAGCCAGGACTCCAGGCTTTCC +
Preference number: 6 (lower is better)
Translates to: IMYSQSSWRLEG*VALLSQDSRLS
Trigger: GGAAAGCCTGGAGTCCTGGCTCAATAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTGGGAATACATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582376.1
ENST00000582821.5
ENST00000584243.5
ENST00000613421.4
ENST00000621217.4
ENST00000649398.1
CDS CAA 72 bp CAGAAGCCAATTATGTATTCCCAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTATTGAGCCAGGACTCC +
Preference number: 6 (lower is better)
Translates to: QKPIMYSQSSWR*EGLVALLSQDS
Trigger: GGAGTCCTGGCTCAATAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTGGGAATACATAATTGGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000537686.6
ENST00000538886.5
ENST00000582376.1
ENST00000582821.5
ENST00000584243.5
ENST00000613421.4
ENST00000621217.4
ENST00000649398.1
CDS CAA 90 bp AATTGTTTTGTAAGAGTTGATGACCCGGGAGAGGTTGTCACTGGCTaGCAGGATGTCCCCTGGAGCAGGAAAGAGAGACTTCTCACTCCT +
Preference number: 6 (lower is better)
Translates to: NCFVRVDDPGEVVTG*QDVPWSRKERLLTP
Trigger: AGGAGTGAGAAGTCTCTCTTTCCTGCTCCAGGGGACATCCTGCAAGCCAGTGACAACCTCTCCCGGGTCATCAACTCTTACAAAACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578896.1
ENST00000582232.1
CDS CCA 72 bp AGAAGCCAATTATGTATTCCCAGTCCTCCTGGCGGTTaGAAGGATTGGTGGCTTTATCAGCTGGATGAACAC +
Preference number: 6 (lower is better)
Translates to: RSQLCIPSPPGG*KDWWLYQLDEH
Trigger: GTGTTCATCCAGCTGATAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTGGGAATACATAATTGGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577435.5
ENST00000579743.2
ENST00000621870.4
CDS CAA 72 bp CAGAAGCCAATTATGTATTCCCAGTCCTCCTGGCGGTaGGAAGGATTGGTGGCTTTATCGTTAGCACTTGAC +
Preference number: 6 (lower is better)
Translates to: QKPIMYSQSSWR*EGLVALSLALD
Trigger: GTCAAGTGCTAACGATAAAGCCACCAATCCTTCCAACCGCCAGGAGGACTGGGAATACATAATTGGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578348.5
ENST00000582486.5
ENST00000582717.5
CDS GCA 72 bp GGGCTAAATGGAGAGAGTTCTGTCCCAGAAGGTGGCTaGAACTTCACTTTCATTGATAGGCTTGATCGATTC +
Preference number: 6 (lower is better)
Translates to: GLNGESSVPEGG*NFTFIDRLDRF
Trigger: GAATCGATCAAGCCTATCAATGAAAGTGAAGTTGCAGCCACCTTCTGGGACAGAACTCTCTCCATTTAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578773.1