Pregenerated sensors for GFRA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000125861Ensembl transcript IDs: ENST00000290417.7, ENST00000319242.8, ENST00000477160.1
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATaGTGGGTAATGCCCAGTTGGGAGGATGCAGTGTTAGACGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: RKDSASMVMAHRWLQ*WVMPSWEDAVLDGV Trigger: GACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR CCA 90 bp | AAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTaGGTAATGCCCAGTTGGGAGGATGCAGTGTTAGACGGGGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: KDSASMVMAHRWLQW*VMPSWEDAVLDGVL Trigger: CAAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR TCA 90 bp | GTCTCAAGGTCTGTGAATAAAGGGACTTACAACCAAGATGCCTCCTaGCAGGGAGACGGGGGCTTTACAGTCAGGCCCCAGCCTACATCC | + |
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Preference number: 1 (lower is better) Translates to: VSRSVNKGTYNQDAS*QGDGGFTVRPQPTS Trigger: GGATGTAGGCTGGGGCCTGACTGTAAAGCCCCCGTCTCCCTGTCAGGAGGCATCTTGGTTGTAAGTCCCTTTATTCACAGACCTTGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR CCA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTaGGAGGATGCAGTGTTAGACGGGGTCTTGTCCGATGGATTCCTT | + |
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Preference number: 1 (lower is better) Translates to: MVMAHRWLQWWVMPS*EDAVLDGVLSDGFL Trigger: AAGGAATCCATCGGACAAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR CCA 90 bp | ATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTaGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATGCAGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: MGNRKDSASMVMAHR*LQWWVMPSWEDAVL Trigger: TAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATGCACCAGGGCCGGCTTaGGGGGTAAGCCAGCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: MVMAHRWLQWWVMPSWEDAPGPA*GVSQPL Trigger: AAGGGGCTGGCTTACCCCCCAAGCCGGCCCTGGTGC...ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CCA 90 bp | TACATCCCTTGCCCCAGGGGACGGCACACAGGGTGTCCAAACCTACAAAGGGCAGCAGGGTGGAGTAGCTaGCTGTGCTATCCGAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: YIPCPRGRHTGCPNLQRAAGWSS*LCYPRS Trigger: CGACCTCGGATAGCACAGCCAGCTACTCCACCCTGC...TGCCCTTTGTAGGTTTGGACACCCTGTGTGCCGTCCCCTGGGGCAAGGGATGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR GCA 90 bp | TACATCCCTTGCCCCAGGGGACGGCACACAGGGTGTCCAAACCTACAAAGGGCATGGAGTAGCTGGCTGTaGTATCCGAGGTCGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: YIPCPRGRHTGCPNLQRAWSSWL*YPRSLS Trigger: GGACAGCGACCTCGGATAGCACAGCCAGCTACTCCA...TGCCCTTTGTAGGTTTGGACACCCTGTGTGCCGTCCCCTGGGGCAAGGGATGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGAATTCTGGGATTCTGGATGGTCTCTGACCTGCTCTAGGGGATCTGGGTCTGCACCAGGGCCGGCTTaGGGGGTAAGCCAGCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LEFWDSGWSLTCSRGSGSAPGPA*GVSQPL Trigger: AAGGGGCTGGCTTACCCCCCAAGCCGGCCCTGGTGC...AGACCCAGATCCCCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAAAGTGACCCTCTCCTaGCCCCACCTTGTGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: QERLCQHGHGAQVATMVGKVTLS*PHLVGD Trigger: GTCTCCCACAAGGTGGGGTCAGGAGAGGGTCACTTT...ACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR GCA 90 bp | GGACTTACAACCAAGATGCCTCCTGACAGGGAGACGGGGGCTTTACAGTCAGGCTGGAGTAGCTGGCTGTaGTATCCGAGGTCGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: GLTTKMPPDRETGALQSGWSSWL*YPRSLS Trigger: GGACAGCGACCTCGGATAGCACAGCCAGCTACTCCA...GCCTGACTGTAAAGCCCCCGTCTCCCTGTCAGGAGGCATCTTGGTTGTAAGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CCA 90 bp | ATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACGCAGGGTGGAGTAGCTaGCTGTGCTATCCGAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: IWGTGKTLPAWSWRTGGYAGWSS*LCYPRS Trigger: CGACCTCGGATAGCACAGCCAGCTACTCCACCCTGC...GTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR TCA 90 bp | ACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAAAGGGCAGCGGAGTaGAAGCACCAGGGCCGGCTT | + |
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Preference number: 2 (lower is better) Translates to: TGSCPMDSLGGYMLGRLIQRAAE*KHQGRL Trigger: AAGCCGGCCCTGGTGCTTTCACTCCGCTGCCCTTTG...TATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGGAGGATGCAGTGTTAGACGGGGTCTTGTCCGATGGATTCCTTAGGGGGAACCAAGATGCCTCCTaGCAGGGAGACGGGGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: SWEDAVLDGVLSDGFLRGNQDAS*QGDGGF Trigger: AAAGCCCCCGTCTCCCTGTCAGGAGGCATCTTGGTT...CCCCCTAAGGAATCCATCGGACAAGACCCCGTCTAACACTGCATCCTCCCAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCCTCAAGCAGCATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCTCTCAGCTACAAAAGTaGCCCTCTCCTGACCCCACC | + |
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Preference number: 2 (lower is better) Translates to: APQAAYGEQERLCQHGHGSQLQK*PSPDPT Trigger: GGTGGGGTCAGGAGAGGGTCACTTTTGTAGCTGAGA...GCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTTGAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGATCTCAGCTACAAAAGTaGCCCTCTCCTGACCCCACC | + |
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Preference number: 2 (lower is better) Translates to: QHGHGAQVATMVGNAQLGSQLQK*PSPDPT Trigger: GGTGGGGTCAGGAGAGGGTCACTTTTGTAGCTGAGA...TCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACACCAGCCTACATCCCTTaGCCCAGGGGACGGCACACA | + |
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Preference number: 2 (lower is better) Translates to: GVLSDGFLRGLYAWEADTPAYIP*PRGRHT Trigger: TGTGTGCCGTCCCCTGGGGCAAGGGATGTAGGCTGG...TGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGTGTTAGACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGCCAGCCTACATCCCTTaGCCCAGGGGACGGCACACA | + |
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Preference number: 2 (lower is better) Translates to: AVLDGVLSDGFLRGLYAWPAYIP*PRGRHT Trigger: TGTGTGCCGTCCCCTGGGGCAAGGGATGTAGGCTGG...CCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGTCTAACACTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR CAA 90 bp | CATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTaGGGAGGATGCAGTGTTAGACGGGGTCTTGTCCGATGGATTCCT | + |
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Preference number: 2 (lower is better) Translates to: HGHGAQVATMVGNAQ*GGCSVRRGLVRWIP Trigger: AGGAATCCATCGGACAAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR TCA 90 bp | GCTACAATGGTGGGTAATGCCCAGTTGGGAGGATGCAGTGTTAGACGGGGTCTTAACCAAGATGCCTCCTaGCAGGGAGACGGGGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: ATMVGNAQLGGCSVRRGLNQDAS*QGDGGF Trigger: AAAGCCCCCGTCTCCCTGTCAGGAGGCATCTTGGTT...AAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGCATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGGGATGGTCTCTGACCTaGTCTAGGGGATCTGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: KQHMGNRKDSASMVMAHRGWSLT*SRGSGS Trigger: AGACCCAGATCCCCTAGAGCAGGTCAGAGACCATCC...CCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR TCA 90 bp | ACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATAAAAGTGACCCTCTCCTaGCCCCACCTTGTGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: TGSCPMDSLGGYMLGRLIKVTLS*PHLVGD Trigger: GTCTCCCACAAGGTGGGGTCAGGAGAGGGTCACTTT...TATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATATTCTGGATGGTCTCTaGCCTGCTCTAGGGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: MVMAHRWLQWWVMPSWEDILDGL*PALGDL Trigger: CAGATCCCCTAGAGCAGGTCAGAGACCATCCAGAAT...ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTCAAGCAGCATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCTGGGTAATGCCCAGTTaGGAGGATGCAGTGTTAGAC | + |
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Preference number: 2 (lower is better) Translates to: APQAAYGEQERLCQHGHGWVMPS*EDAVLD Trigger: GTCTAACACTGCATCCTCCCAACTGGGCATTACCCA...GCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTTGAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR CAA 90 bp | TGGTGGGTAATGCCCAGTTGGGAGGATGCAGTGTTAGACGGGGTCTaGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: WWVMPSWEDAVLDGV*SDGFLRGLYAWEAD Trigger: ATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR TCA 90 bp | TACAATTTCCTAGAATTCTGGGATTCTGGATGGTCTCTGACCTGCTCTAGGGGACAAAGGGCAGCGGAGTaGAAGCACCAGGGCCGGCTT | + |
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Preference number: 2 (lower is better) Translates to: YNFLEFWDSGWSLTCSRGQRAAE*KHQGRL Trigger: AAGCCGGCCCTGGTGCTTTCACTCCGCTGCCCTTTG...TCCCCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCTAGGAAATTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGTTAGACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGATTCTGGATGGTCTCTaGCCTGCTCTAGGGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: AVLDGVLSDGFLRGLYAWILDGL*PALGDL Trigger: CAGATCCCCTAGAGCAGGTCAGAGACCATCCAGAAT...CCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGTCTAACACTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAGACTTACAACCAAGATaGCTCCTGACAGGGAGACGG | + |
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Preference number: 2 (lower is better) Translates to: GVLSDGFLRGLYAWEADTDLQPR*LLTGRR Trigger: CCGTCTCCCTGTCAGGAGGCATCTTGGTTGTAAGTC...TGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCAGCATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGTGGTCTCAAGGTCTGTaGATAAAGGGACTTACAACC | + |
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Preference number: 2 (lower is better) Translates to: QAAYGEQERLCQHGHGAQWSQGL*IKGLTT Trigger: GGTTGTAAGTCCCTTTATTCACAGACCTTGAGACCA...CTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATAGAATTCTGGGATTCTaGATGGTCTCTGACCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: ERLCQHGHGAQVATMVGNRILGF*MVSDLL Trigger: GAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCT...ATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR GCA 90 bp | CCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAATTTCCTAGAGGATGGTCTCTGACCTaGTCTAGGGGATCTGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: PMDSLGGYMLGRLIQFPRGWSLT*SRGSGS Trigger: AGACCCAGATCCCCTAGAGCAGGTCAGAGACCATCC...TCTAGGAAATTGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATAAGAATTCTGGGATTCTaGATGGTCTCTGACCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: TGSCPMDSLGGYMLGRLIRILGF*MVSDLL Trigger: GAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCT...TATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATTTCCTAGAATTCTaGGATTCTGGATGGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QERLCQHGHGAQVATMVGNFLEF*DSGWSL Trigger: CAGAGACCATCCAGAATCCCAGAATTCTAGGAAATT...ACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CCA 90 bp | CCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAATTTCCTAGATTCTGGGATTCTGGATaGTCTCTGACCTGCTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: PMDSLGGYMLGRLIQFPRFWDSG*SLTCSR Trigger: CCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAA...TCTAGGAAATTGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTCTCCTGACCCCACCTaGTGGGAGACCCCAGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: TGKTLPAWSWRTGGYNGGSPDPT*WETPVV Trigger: GACCACTGGGGTCTCCCACAAGGTGGGGTCAGGAGA...CCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CAA 90 bp | CTAGAATTCTGGGATTCTGGATGGTCTCTGACCTGCTCTAGGGGATCTGGGTCTCCCAGCCTACATCCCTaGCCCCAGGGGACGGCACAC | + |
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Preference number: 3 (lower is better) Translates to: LEFWDSGWSLTCSRGSGSPSLHP*PQGTAH Trigger: GTGTGCCGTCCCCTGGGGCAAGGGATGTAGGCTGGG...AGACCCAGATCCCCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CAA 90 bp | GCAGTGTTAGACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGCCCAGCCTACATCCCTaGCCCCAGGGGACGGCACAC | + |
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Preference number: 3 (lower is better) Translates to: AVLDGVLSDGFLRGLYAWPSLHP*PQGTAH Trigger: GTGTGCCGTCCCCTGGGGCAAGGGATGTAGGCTGGG...CCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGTCTAACACTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CAA 90 bp | CTAGAATTCTGGGATTCTGGATGGTCTCTGACCTGCTCTAGGGGATCTGGGTCTTCTCCTGACCCCACCTaGTGGGAGACCCCAGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: LEFWDSGWSLTCSRGSGSSPDPT*WETPVV Trigger: GACCACTGGGGTCTCCCACAAGGTGGGGTCAGGAGA...AGACCCAGATCCCCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR GCA 72 bp | GCCCCTCAAGCAGCATATGGGGAACAGGAAAGACTCTaGCAGCATGGTCATGGCGCACAGGTGGCTACAATG | + |
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Preference number: 3 (lower is better) Translates to: APQAAYGEQERL*QHGHGAQVATM Trigger: CATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTTGAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR CCA 72 bp | GCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTaGGAGGATGCAGTGTTAGACGGGGTCTTGTCCGAT | + |
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Preference number: 3 (lower is better) Translates to: AHRWLQWWVMPS*EDAVLDGVLSD Trigger: ATCGGACAAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCCTCAAGCAGCATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGTGGGTAATGCCCAGTaGGGAGGATGCAGTGTTAGA | + |
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Preference number: 3 (lower is better) Translates to: APQAAYGEQERLCQHGHGVGNAQ*GGCSVR Trigger: TCTAACACTGCATCCTCCCAACTGGGCATTACCCAC...GCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTTGAGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR CCA 72 bp | TCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATaGTGGGTAATGCCCAGTTGGGAGGATGCAGTGTTA | + |
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Preference number: 3 (lower is better) Translates to: SASMVMAHRWLQ*WVMPSWEDAVL Trigger: TAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR CCA 72 bp | AGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTaGCTACAATGGTGGGTAATGCCCAGTTGGGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: RKDSASMVMAHR*LQWWVMPSWED Trigger: ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR TCA 72 bp | TCTGTGAATAAAGGGACTTACAACCAAGATGCCTCCTaGCAGGGAGACGGGGGCTTTACAGTCAGGCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: SVNKGTYNQDAS*QGDGGFTVRPQ Trigger: CTGGGGCCTGACTGTAAAGCCCCCGTCTCCCTGTCAGGAGGCATCTTGGTTGTAAGTCCCTTTATTCACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR GCA 72 bp | GTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATaGAGTGTTAGACGGGGTCTTGTCCGATGGATTCCT | + |
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Preference number: 3 (lower is better) Translates to: VATMVGNAQLGG*SVRRGLVRWIP Trigger: AGGAATCCATCGGACAAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| 3UTR GCA 72 bp | TTCCTAGAATTCTGGGATTCTGGATGGTCTCTGACCTaGTCTAGGGGATCTGGGTCTCCAGAGAGGTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLEFWDSGWSLT*SRGSGSPERSQ Trigger: CTGAGACCTCTCTGGAGACCCAGATCCCCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCTAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GGACTTACAACCAAGATGCCTCCTGACAGGGAGACGGGGGCTTTACAGTCAGGCAGCCGTCGGGGGCGCTaGGCGCTGGGGTGCACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLTTKMPPDRETGALQSGSRRGR*ALGCTR Trigger: TCTCGTGCACCCCAGCGCCCAGCGCCCCCGACGGCT...GCCTGACTGTAAAGCCCCCGTCTCCCTGTCAGGAGGCATCTTGGTTGTAAGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGAGCCGTCGGGGGCGCTaGGCGCTGGGGTGCACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMVMAHRWLQWWVMPSWESRRGR*ALGCTR Trigger: TCTCGTGCACCCCAGCGCCCAGCGCCCCCGACGGCT...CTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATACCGCGCGTCCGCCGTaGAGGCTTCGGCCGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MVMAHRWLQWWVMPSWEDTARPP*RLRPRP Trigger: TGGACGCGGCCGAAGCCTGCACGGCGGACGCGCGGT...ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | ATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACACCGCGCGTCCGCCGTaGAGGCTTCGGCCGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IWGTGKTLPAWSWRTGGYTARPP*RLRPRP Trigger: TGGACGCGGCCGAAGCCTGCACGGCGGACGCGCGGT...GTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCTCAAGCAGCATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCTCGGAGCGCAAACGCTaGCACCGCGCGTCCGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: APQAAYGEQERLCQHGHGSERKR*HRASAV Trigger: CACGGCGGACGCGCGGTGCCAGCGTTTGCGCTCCGA...GCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTTGAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | TTACAACCAAGATGCCTCCTGACAGGGAGACGGGGGCTTTACAGTCAGGCCCCACAGAAGAGCAGTGCGTaGGTGAGCGCGGGCGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LQPRCLLTGRRGLYSQAPQKSSA*VSAGGP Trigger: CGGGCCGCCCGCGCTCACCCACGCACTGCTCTTCTG...TGGGGCCTGACTGTAAAGCCCCCGTCTCCCTGTCAGGAGGCATCTTGGTTGTAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GGACTTACAACCAAGATGCCTCCTGACAGGGAGACGGGGGCTTTACAGTCAGGCCAGAAGAGCAGTGCGTaGGTGAGCGCGGGCGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GLTTKMPPDRETGALQSGQKSSA*VSAGGP Trigger: CGGGCCGCCCGCGCTCACCCACGCACTGCTCTTCTG...GCCTGACTGTAAAGCCCCCGTCTCCCTGTCAGGAGGCATCTTGGTTGTAAGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTGAGGGCACGAAGGTCTaGCGCCGACGCTCGGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QERLCQHGHGAQVATMVGEGTKV*RRRSAH Trigger: GTGCGCCGAGCGTCGGCGCCAGACCTTCGTGCCCTC...ACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCTCAAGCAGCATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCCACGCCGGTTCCCGCTaGCTCCGCAGTCGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APQAAYGEQERLCQHGHGHAGSR*LRSRTR Trigger: CCTGGTGCGACTGCGGAGCCAGCGGGAACCGGCGTG...GCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTTGAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | GGACTTACAACCAAGATGCCTCCTGACAGGGAGACGGGGGCTTTACAGTCAGGCACCTGCAGGAGGCTGTaGTCCGGGTCTCCCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLTTKMPPDRETGALQSGTCRRL*SGSPWG Trigger: CCCCCAGGGAGACCCGGAGCACAGCCTCCTGCAGGT...GCCTGACTGTAAAGCCCCCGTCTCCCTGTCAGGAGGCATCTTGGTTGTAAGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGCACCAGGGCCGGCTTaGGGGGTAAGCCAGCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SMVMAHRWLQWWVMPSWEAPGPA*GVSQPL Trigger: AAGGGGCTGGCTTACCCCCCAAGCCGGCCCTGGTGC...CTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR TCA 90 bp | CATCCCTTGCCCCAGGGGACGGCACACAGGGTGTCCAAACCTACAAAGGGCAGCAAAGTGACCCTCTCCTaGCCCCACCTTGTGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HPLPQGTAHRVSKPTKGSKVTLS*PHLVGD Trigger: GTCTCCCACAAGGTGGGGTCAGGAGAGGGTCACTTT...GCTGCCCTTTGTAGGTTTGGACACCCTGTGTGCCGTCCCCTGGGGCAAGGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTGTTAGACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGCCAGGAGGCGAGGCCTaGAGACCCGGCTGCGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: AVLDGVLSDGFLRGLYAWPGGEA*RPGCAR Trigger: GCGAGCGCAGCCGGGTCTGCAGGCCTCGCCTCCTGG...CCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGTCTAACACTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290417.7 |
||
| CDS-3UTR CCA 90 bp | ACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATAAGGCAGCGGGCGCCCTaGTCCAGCAGGCAGCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TGSCPMDSLGGYMLGRLIRQRAP*SSRQPS Trigger: CGACGGCTGCCTGCTGGACCAGGGCGCCCGCTGCCT...TATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | CAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGACTGGGGGCCACCCGCTaGCAAAGGCCTGAATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QHGHGAQVATMVGNAQLGLGATR*QRPEWH Trigger: GTGCCATTCAGGCCTTTGCCAGCGGGTGGCCCCCAG...TCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTTGCTCCGGGTCTCCCTaGGGGTTCAGCTGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QERLCQHGHGAQVATMVGCSGSP*GFSWSS Trigger: GCTGGACCAGCTGAACCCCCAGGGAGACCCGGAGCA...ACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGCCGCTGGCAAAGGCCTaGATGGCACCATCCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASMVMAHRWLQWWVMPSWPLAKA*MAPSKQ Trigger: CTGCTTGGATGGTGCCATTCAGGCCTTTGCCAGCGG...CCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAGCCCGGCCCAGGCACTaGGCCACATACTCGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GVLSDGFLRGLYAWEADTARPRH*ATYSER Trigger: GCGCTCCGAGTATGTGGCGCAGTGCCTGGGCCGGGC...TGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | ACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATAGCCCGGCCCAGGCACTaGGCCACATACTCGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TGSCPMDSLGGYMLGRLIARPRH*ATYSER Trigger: GCGCTCCGAGTATGTGGCGCAGTGCCTGGGCCGGGC...TATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | GCTACAATGGTGGGTAATGCCCAGTTGGGAGGATGCAGTGTTAGACGGGGTCTTACCTGCAGGAGGCTGTaGTCCGGGTCTCCCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATMVGNAQLGGCSVRRGLTCRRL*SGSPWG Trigger: CCCCCAGGGAGACCCGGAGCACAGCCTCCTGCAGGT...AAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATCCTGTGGAGGACACCTaGAGGAGGCTGTGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: MVMAHRWLQWWVMPSWEDPVEDT*RRLCSG Trigger: CCCGGAGCACAGCCTCCTGCAGGTGTCCTCCACAGG...ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTTAGACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGCACGCCGGTTCCCGCTaGCTCCGCAGTCGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVLDGVLSDGFLRGLYAWHAGSR*LRSRTR Trigger: CCTGGTGCGACTGCGGAGCCAGCGGGAACCGGCGTG...CCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGTCTAACACTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATTGCTCCGGGTCTCCCTaGGGGTTCAGCTGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MVMAHRWLQWWVMPSWEDCSGSP*GFSWSS Trigger: GCTGGACCAGCTGAACCCCCAGGGAGACCCGGAGCA...ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATCCTGTGGAGGACACCTaGAGGAGGCTGTGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERLCQHGHGAQVATMVGNPVEDT*RRLCSG Trigger: CCCGGAGCACAGCCTCCTGCAGGTGTCCTCCACAGG...ATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATCCAGCCTACATCCCTTaGCCCAGGGGACGGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: MVMAHRWLQWWVMPSWEDPAYIP*PRGRHT Trigger: TGTGTGCCGTCCCCTGGGGCAAGGGATGTAGGCTGG...ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCTCAAGCAGCATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGCAGGGTGGAGTAGCTaGCTGTGCTATCCGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: APQAAYGEQERLCQHGHGAGWSS*LCYPRS Trigger: CGACCTCGGATAGCACAGCCAGCTACTCCACCCTGC...GCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTTGAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | CATCCCTTGCCCCAGGGGACGGCACACAGGGTGTCCAAACCTACAAAGGGCAGCGTCATGGCGCACAGGTaGCTACAATGGTGGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: HPLPQGTAHRVSKPTKGSVMAHR*LQWWVM Trigger: CATTACCCACCATTGTAGCCACCTGTGCGCCATGAC...GCTGCCCTTTGTAGGTTTGGACACCCTGTGTGCCGTCCCCTGGGGCAAGGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR TCA 90 bp | CAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAAACCAAGATGCCTCCTaGCAGGGAGACGGGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QHGHGAQVATMVGNAQLGNQDAS*QGDGGF Trigger: AAAGCCCCCGTCTCCCTGTCAGGAGGCATCTTGGTT...TCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | TACATCCCTTGCCCCAGGGGACGGCACACAGGGTGTCCAAACCTACAAAGGGCAGGATGGTCTCTGACCTaGTCTAGGGGATCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YIPCPRGRHTGCPNLQRAGWSLT*SRGSGS Trigger: AGACCCAGATCCCCTAGAGCAGGTCAGAGACCATCC...TGCCCTTTGTAGGTTTGGACACCCTGTGTGCCGTCCCCTGGGGCAAGGGATGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | TACATCCCTTGCCCCAGGGGACGGCACACAGGGTGTCCAAACCTACAAAGGGCAGCCCAGTTGGGAGGATaGAGTGTTAGACGGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YIPCPRGRHTGCPNLQRAAQLGG*SVRRGL Trigger: AAGACCCCGTCTAACACTGCATCCTCCCAACTGGGC...TGCCCTTTGTAGGTTTGGACACCCTGTGTGCCGTCCCCTGGGGCAAGGGATGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACATGGCCACAGGGCCAATaGCAGGCAGGGCACAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVLSDGFLRGLYAWEADTWPQGQ*QAGHRV Trigger: CACCCTGTGCCCTGCCTGGCATTGGCCCTGTGGCCA...TGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | CCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAATTTCCTAGAAGGCAGCGGGCGCCCTaGTCCAGCAGGCAGCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PMDSLGGYMLGRLIQFPRRQRAP*SSRQPS Trigger: CGACGGCTGCCTGCTGGACCAGGGCGCCCGCTGCCT...TCTAGGAAATTGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTTAGACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGCTGGGGGCCACCCGCTaGCAAAGGCCTGAATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AVLDGVLSDGFLRGLYAWLGATR*QRPEWH Trigger: GTGCCATTCAGGCCTTTGCCAGCGGGTGGCCCCCAG...CCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGTCTAACACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGAGGATGCAGTGTTAGACGGGGTCTTGTCCGATGGATTCCTTAGGGGGGCAGGGTGGAGTAGCTaGCTGTGCTATCCGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SWEDAVLDGVLSDGFLRGAGWSS*LCYPRS Trigger: CGACCTCGGATAGCACAGCCAGCTACTCCACCCTGC...CCCCCTAAGGAATCCATCGGACAAGACCCCGTCTAACACTGCATCCTCCCAACT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| 3UTR CAA 72 bp | GGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTaGGGAGGATGCAGTGTTAGACGGGGTCTTGTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GAQVATMVGNAQ*GGCSVRRGLVR Trigger: TCGGACAAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR TCA 90 bp | GCTACAATGGTGGGTAATGCCCAGTTGGGAGGATGCAGTGTTAGACGGGGTCTTCCGCTGGCAAAGGCCTaGATGGCACCATCCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATMVGNAQLGGCSVRRGLPLAKA*MAPSKQ Trigger: CTGCTTGGATGGTGCCATTCAGGCCTTTGCCAGCGG...AAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR TCA 90 bp | CTAGAATTCTGGGATTCTGGATGGTCTCTGACCTGCTCTAGGGGATCTGGGTCTCAAAGGGCAGCGGAGTaGAAGCACCAGGGCCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEFWDSGWSLTCSRGSGSQRAAE*KHQGRL Trigger: AAGCCGGCCCTGGTGCTTTCACTCCGCTGCCCTTTG...AGACCCAGATCCCCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGTCTCAGCTACAAAAGTaGCCCTCTCCTGACCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SMVMAHRWLQWWVMPSWESQLQK*PSPDPT Trigger: GGTGGGGTCAGGAGAGGGTCACTTTTGTAGCTGAGA...CTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR TCA 90 bp | TACATCCCTTGCCCCAGGGGACGGCACACAGGGTGTCCAAACCTACAAAGGGCAATTCTGGATGGTCTCTaGCCTGCTCTAGGGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: YIPCPRGRHTGCPNLQRAILDGL*PALGDL Trigger: CAGATCCCCTAGAGCAGGTCAGAGACCATCCAGAAT...TGCCCTTTGTAGGTTTGGACACCCTGTGTGCCGTCCCCTGGGGCAAGGGATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGCATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGTGGAGTAGCTGGCTGTaGTATCCGAGGTCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QAAYGEQERLCQHGHGAQWSSWL*YPRSLS Trigger: GGACAGCGACCTCGGATAGCACAGCCAGCTACTCCA...CTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | TACATCCCTTGCCCCAGGGGACGGCACACAGGGTGTCCAAACCTACAAAGGGCAGACTTACAACCAAGATaGCTCCTGACAGGGAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: YIPCPRGRHTGCPNLQRADLQPR*LLTGRR Trigger: CCGTCTCCCTGTCAGGAGGCATCTTGGTTGTAAGTC...TGCCCTTTGTAGGTTTGGACACCCTGTGTGCCGTCCCCTGGGGCAAGGGATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTGCCCAGTTGGGAGGATaGAGTGTTAGACGGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QERLCQHGHGAQVATMVGAQLGG*SVRRGL Trigger: AAGACCCCGTCTAACACTGCATCCTCCCAACTGGGC...ACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | CCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAATTTCCTAGATCGGAGCGCAAACGCTaGCACCGCGCGTCCGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PMDSLGGYMLGRLIQFPRSERKR*HRASAV Trigger: CACGGCGGACGCGCGGTGCCAGCGTTTGCGCTCCGA...TCTAGGAAATTGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTTGGCAAAGGCCTGAATaGCACCATCCAAGCAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QERLCQHGHGAQVATMVGWQRPE*HHPSSG Trigger: ACCGCTGCTTGGATGGTGCCATTCAGGCCTTTGCCA...ACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | CAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGACCAGGACAGGAAGTATaGAGAGCAGGGAGCGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QHGHGAQVATMVGNAQLGPGQEV*RAGSVS Trigger: AGAGACGCTCCCTGCTCTCCATACTTCCTGTCCTGG...TCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATAAGACTCTGCCAGCATaGTCATGGCGCACAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MVMAHRWLQWWVMPSWEDKTLPA*SWRTGG Trigger: GCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTT...ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCTCAAGCAGCATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCATTCTGGATGGTCTCTaGCCTGCTCTAGGGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: APQAAYGEQERLCQHGHGILDGL*PALGDL Trigger: CAGATCCCCTAGAGCAGGTCAGAGACCATCCAGAAT...GCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTTGAGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAGCCTGCAGACCCGGCTaGGCTCGCAGAAGTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVLSDGFLRGLYAWEADTACRPG*ARRSLR Trigger: CCTTAAACTTCTGCGAGCGCAGCCGGGTCTGCAGGC...TGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290417.7 |
||
| CDS-3UTR GCA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATGGATGGTCTCTGACCTaGTCTAGGGGATCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MVMAHRWLQWWVMPSWEDGWSLT*SRGSGS Trigger: AGACCCAGATCCCCTAGAGCAGGTCAGAGACCATCC...ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | TACAATTTCCTAGAATTCTGGGATTCTGGATGGTCTCTGACCTGCTCTAGGGGACCCTGGGGGTTCAGCTaGTCCAGCAGGACTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YNFLEFWDSGWSLTCSRGPWGFS*SSRTGG Trigger: GCCCCCAGTCCTGCTGGACCAGCTGAACCCCCAGGG...TCCCCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCTAGGAAATTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATCCAGGACAGGAAGTATaGAGAGCAGGGAGCGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MVMAHRWLQWWVMPSWEDPGQEV*RAGSVS Trigger: AGAGACGCTCCCTGCTCTCCATACTTCCTGTCCTGG...ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGAGGTGGCTACAATGGTaGGTAATGCCCAGTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SMVMAHRWLQWWVMPSWERWLQW*VMPSWE Trigger: CTCCCAACTGGGCATTACCCACCATTGTAGCCACCT...CTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATAAGACTCTGCCAGCATaGTCATGGCGCACAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERLCQHGHGAQVATMVGNKTLPA*SWRTGG Trigger: GCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTT...ATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | AACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGACTTACAACCAAGATaGCTCCTGACAGGGAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: NRKDSASMVMAHRWLQWWDLQPR*LLTGRR Trigger: CCGTCTCCCTGTCAGGAGGCATCTTGGTTGTAAGTC...CCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGCATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGAACAGGAAAGACTCTaGCAGCATGGTCATGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QAAYGEQERLCQHGHGAQEQERL*QHGHGA Trigger: TGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTC...CTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | TACAATTTCCTAGAATTCTGGGATTCTGGATGGTCTCTGACCTGCTCTAGGGGATGGCCACAGGGCCAATaGCAGGCAGGGCACAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YNFLEFWDSGWSLTCSRGWPQGQ*QAGHRV Trigger: CACCCTGTGCCCTGCCTGGCATTGGCCCTGTGGCCA...TCCCCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCTAGGAAATTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATTGGCAAAGGCCTGAATaGCACCATCCAAGCAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERLCQHGHGAQVATMVGNWQRPE*HHPSSG Trigger: ACCGCTGCTTGGATGGTGCCATTCAGGCCTTTGCCA...ATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTTCTGGGATTCTGGATaGTCTCTGACCTGCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGKTLPAWSWRTGGYNGGFWDSG*SLTCSR Trigger: CCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAA...CCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTTGGGTAATGCCCAGTTaGGAGGATGCAGTGTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QERLCQHGHGAQVATMVGWVMPS*EDAVLD Trigger: GTCTAACACTGCATCCTCCCAACTGGGCATTACCCA...ACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GCTACAATGGTGGGTAATGCCCAGTTGGGAGGATGCAGTGTTAGACGGGGTCTTCTGCCAGCATGGTCATaGCGCACAGGTGGCTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATMVGNAQLGGCSVRRGLLPAWS*RTGGYN Trigger: ATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAG...AAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | ACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATAAAACCAGGGGGAAGATaGCCACAGGGCCAATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGSCPMDSLGGYMLGRLIKPGGR*PQGQCQ Trigger: CTGGCATTGGCCCTGTGGCCATCTTCCCCCTGGTTT...TATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | ATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACTGGGTAATGCCCAGTTaGGAGGATGCAGTGTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IWGTGKTLPAWSWRTGGYWVMPS*EDAVLD Trigger: GTCTAACACTGCATCCTCCCAACTGGGCATTACCCA...GTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | CTAGAATTCTGGGATTCTGGATGGTCTCTGACCTGCTCTAGGGGATCTGGGTCTCTGCCAGCATGGTCATaGCGCACAGGTGGCTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LEFWDSGWSLTCSRGSGSLPAWS*RTGGYN Trigger: ATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAG...AGACCCAGATCCCCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | ATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACCCCTCAAGCAGCATATaGGGAACAGGAAAGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IWGTGKTLPAWSWRTGGYPSSSI*GTGKTL Trigger: CAGAGTCTTTCCTGTTCCCCATATGCTGCTTGAGGG...GTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| 3UTR CAA 72 bp | ATGCCCAGTTGGGAGGATGCAGTGTTAGACGGGGTCTaGTCCGATGGATTCCTTAGGGGGTTATATGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MPSWEDAVLDGV*SDGFLRGLYAW Trigger: CCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | CTAGAATTCTGGGATTCTGGATGGTCTCTGACCTGCTCTAGGGGATCTGGGTCTGAACAGGAAAGACTCTaGCAGCATGGTCATGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEFWDSGWSLTCSRGSGSEQERL*QHGHGA Trigger: TGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTC...AGACCCAGATCCCCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATTTCTGGGATTCTGGATaGTCTCTGACCTGCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERLCQHGHGAQVATMVGNFWDSG*SLTCSR Trigger: CCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAA...ATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATAGAATTCTGGGATTCTaGATGGTCTCTGACCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MVMAHRWLQWWVMPSWEDRILGF*MVSDLL Trigger: GAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCT...ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAAGGTGGCTACAATGGTaGGTAATGCCCAGTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVLSDGFLRGLYAWEADTRWLQW*VMPSWE Trigger: CTCCCAACTGGGCATTACCCACCATTGTAGCCACCT...TGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTTAGACGGGGTCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGTCATGGCGCACAGGTaGCTACAATGGTGGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: AVLDGVLSDGFLRGLYAWVMAHR*LQWWVM Trigger: CATTACCCACCATTGTAGCCACCTGTGCGCCATGAC...CCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGACCCCGTCTAACACTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR TCA 90 bp | AACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGTGGTCTCAAGGTCTGTaGATAAAGGGACTTACAACC | + |
|
Preference number: 4 (lower is better) Translates to: NRKDSASMVMAHRWLQWWWSQGL*IKGLTT Trigger: GGTTGTAAGTCCCTTTATTCACAGACCTTGAGACCA...CCACCATTGTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR TCA 90 bp | TACAATTTCCTAGAATTCTGGGATTCTGGATGGTCTCTGACCTGCTCTAGGGGAAAAGTGACCCTCTCCTaGCCCCACCTTGTGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YNFLEFWDSGWSLTCSRGKVTLS*PHLVGD Trigger: GTCTCCCACAAGGTGGGGTCAGGAGAGGGTCACTTT...TCCCCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCTAGGAAATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | CCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAATTTCCTAGATGGAGTAGCTGGCTGTaGTATCCGAGGTCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PMDSLGGYMLGRLIQFPRWSSWL*YPRSLS Trigger: GGACAGCGACCTCGGATAGCACAGCCAGCTACTCCA...TCTAGGAAATTGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | CTAGAATTCTGGGATTCTGGATGGTCTCTGACCTGCTCTAGGGGATCTGGGTCTCCCTCAAGCAGCATATaGGGAACAGGAAAGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEFWDSGWSLTCSRGSGSPSSSI*GTGKTL Trigger: CAGAGTCTTTCCTGTTCCCCATATGCTGCTTGAGGG...AGACCCAGATCCCCTAGAGCAGGTCAGAGACCATCCAGAATCCCAGAATTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | CCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAATTTCCTAGAAAACCAGGGGGAAGATaGCCACAGGGCCAATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PMDSLGGYMLGRLIQFPRKPGGR*PQGQCQ Trigger: CTGGCATTGGCCCTGTGGCCATCTTCCCCCTGGTTT...TCTAGGAAATTGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAATTTACCTGCAGACCCGGCTaGGCTCGCAGAAGTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCPMDSLGGYMLGRLIQFTCRPG*ARRSLR Trigger: CCTTAAACTTCTGCGAGCGCAGCCGGGTCTGCAGGT...AAATTGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATAATTTCCTAGAATTCTaGGATTCTGGATGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MVMAHRWLQWWVMPSWEDNFLEF*DSGWSL Trigger: CAGAGACCATCCAGAATCCCAGAATTCTAGGAAATT...ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CCA 90 bp | ATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGTGGCTACAATTTCCTAGAATTCTaGGATTCTGGATGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IWGTGKTLPAWSWRTGGYNFLEF*DSGWSL Trigger: CAGAGACCATCCAGAATCCCAGAATTCTAGGAAATT...GTAGCCACCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR TCA 90 bp | CCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAATTTCCTAGATGGTCTCAAGGTCTGTaGATAAAGGGACTTACAACC | + |
|
Preference number: 4 (lower is better) Translates to: PMDSLGGYMLGRLIQFPRWSQGL*IKGLTT Trigger: GGTTGTAAGTCCCTTTATTCACAGACCTTGAGACCA...TCTAGGAAATTGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS CCA 90 bp | GCGGGCGCCCTGGTCCAGCAGGCAGCCGTCGGGGGCGCTGGGCGCTaGGGTGCACGAGACCTGAAAGGCCAGGAGGCGAGGCCTGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGALVQQAAVGGAGR*GARDLKGQEARPAR Trigger: CCGCGCAGGCCTCGCCTCCTGGCCTTTCAGGTCTCGTGCACCCCAGCGCCCAGCGCCCCCGACGGCTGCCTGCTGGACCAGGGCGCCCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319242.8 |
||
| CDS GCA 90 bp | CGCCCTGGTCCAGCAGGCAGCCGTCGGGGGCGCTGGGCGCTGGGGTaGACGAGACCTGAAAGGCCAGGAGGCGAGGCCTGCGCGGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPGPAGSRRGRWALG*TRPERPGGEACAAG Trigger: TCCCGCCGCGCAGGCCTCGCCTCCTGGCCTTTCAGGTCTCGTGCACCCCAGCGCCCAGCGCCCCCGACGGCTGCCTGCTGGACCAGGGCG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319242.8 |
||
| CDS GCA 90 bp | CGCCCTGGTCCAGCAGGCAGCCGTCGGGGGCGCTGGGCGCTGGGGTaGACGAGACCTGAAAGGCCAGGAGGCGAGGCCTGCAGACCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPGPAGSRRGRWALG*TRPERPGGEACRPG Trigger: GCCGGGTCTGCAGGCCTCGCCTCCTGGCCTTTCAGGTCTCGTGCACCCCAGCGCCCAGCGCCCCCGACGGCTGCCTGCTGGACCAGGGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000477160.1 |
||
| CDS CCA 90 bp | GCGGGCGCCCTGGTCCAGCAGGCAGCCGTCGGGGGCGCTGGGCGCTaGGGTGCACGAGACCTGAAAGGCCAGGAGGCGAGGCCTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGALVQQAAVGGAGR*GARDLKGQEARPAD Trigger: GTCTGCAGGCCTCGCCTCCTGGCCTTTCAGGTCTCGTGCACCCCAGCGCCCAGCGCCCCCGACGGCTGCCTGCTGGACCAGGGCGCCCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000477160.1 |
||
| CDS CCA 90 bp | GCAGCCCGGCCCAGGCACTGCGCCACATACTCGGAGCGCAAACGCTaGCACCGCGCGTCCGCCGTGCAGGCTTCGGCCGCGTCCACACAT | + |
|
Preference number: 5 (lower is better) Translates to: AARPRHCATYSERKR*HRASAVQASAASTH Trigger: ATGTGTGGACGCGGCCGAAGCCTGCACGGCGGACGCGCGGTGCCAGCGTTTGCGCTCCGAGTATGTGGCGCAGTGCCTGGGCCGGGCTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000290417.7 ENST00000319242.8 ENST00000477160.1 |
||
| CDS GCA 90 bp | GCGCCACATACTCGGAGCGCAAACGCTGGCACCGCGCGTCCGCCGTaGAGGCTTCGGCCGCGTCCACACATCGGTTCCCTCCGACCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: APHTRSANAGTARPP*RLRPRPHIGSLRPS Trigger: GCTCGGTCGGAGGGAACCGATGTGTGGACGCGGCCGAAGCCTGCACGGCGGACGCGCGGTGCCAGCGTTTGCGCTCCGAGTATGTGGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000290417.7 ENST00000319242.8 ENST00000477160.1 |
||
| CDS CCA 90 bp | GCTGTGCTCCGGGTCTCCCTGGGGGTTCAGCTGGTCCAGCAGGACTaGGGGCCACCCGCTGGCAAAGGCCTGAATGGCACCATCCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AVLRVSLGVQLVQQD*GPPAGKGLNGTIQA Trigger: TGCTTGGATGGTGCCATTCAGGCCTTTGCCAGCGGGTGGCCCCCAGTCCTGCTGGACCAGCTGAACCCCCAGGGAGACCCGGAGCACAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCATATGGGGAACAGGAAAGACTCTGCCAGCATGGTCATGGCGCACAGGCCCAGCCTACATCCCTaGCCCCAGGGGACGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: KQHMGNRKDSASMVMAHRPSLHP*PQGTAH Trigger: GTGTGCCGTCCCCTGGGGCAAGGGATGTAGGCTGGG...CCTGTGCGCCATGACCATGCTGGCAGAGTCTTTCCTGTTCCCCATATGCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
||
| CDS-3UTR CAA 90 bp | ATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGGATCCCAGCCTACATCCCTaGCCCCAGGGGACGGCACAC | + |
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Preference number: 5 (lower is better) Translates to: MVMAHRWLQWWVMPSWEDPSLHP*PQGTAH Trigger: GTGTGCCGTCCCCTGGGGCAAGGGATGTAGGCTGGG...ATCCTCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| CDS-3UTR CAA 90 bp | GGACTTACAACCAAGATGCCTCCTGACAGGGAGACGGGGGCTTTACAGTCAGGCTCTCCTGACCCCACCTaGTGGGAGACCCCAGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: GLTTKMPPDRETGALQSGSPDPT*WETPVV Trigger: GACCACTGGGGTCTCCCACAAGGTGGGGTCAGGAGA...GCCTGACTGTAAAGCCCCCGTCTCCCTGTCAGGAGGCATCTTGGTTGTAAGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| CDS-3UTR CAA 90 bp | GCTACAATGGTGGGTAATGCCCAGTTGGGAGGATGCAGTGTTAGACGGGGTCTTTCTCCTGACCCCACCTaGTGGGAGACCCCAGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: ATMVGNAQLGGCSVRRGLSPDPT*WETPVV Trigger: GACCACTGGGGTCTCCCACAAGGTGGGGTCAGGAGA...AAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| CDS-3UTR CAA 90 bp | CAGCATGGTCATGGCGCACAGGTGGCTACAATGGTGGGTAATGCCCAGTTGGGAGTGTTAGACGGGGTCTaGTCCGATGGATTCCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: QHGHGAQVATMVGNAQLGVLDGV*SDGFLR Trigger: CCTAAGGAATCCATCGGACAAGACCCCGTCTAACAC...TCCCAACTGGGCATTACCCACCATTGTAGCCACCTGTGCGCCATGACCATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| CDS-3UTR CAA 90 bp | GCTACAATGGTGGGTAATGCCCAGTTGGGAGGATGCAGTGTTAGACGGGGTCTTGTGGGTAATGCCCAGTaGGGAGGATGCAGTGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: ATMVGNAQLGGCSVRRGLVGNAQ*GGCSVR Trigger: TCTAACACTGCATCCTCCCAACTGGGCATTACCCAC...AAGACCCCGTCTAACACTGCATCCTCCCAACTGGGCATTACCCACCATTGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| CDS-3UTR CAA 90 bp | TCTTGTCCGATGGATTCCTTAGGGGGTTATATGCTTGGGAGGCTGATACAATTTGTGGGTAATGCCCAGTaGGGAGGATGCAGTGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: SCPMDSLGGYMLGRLIQFVGNAQ*GGCSVR Trigger: TCTAACACTGCATCCTCCCAACTGGGCATTACCCAC...AAATTGTATCAGCCTCCCAAGCATATAACCCCCTAAGGAATCCATCGGACAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| CDS CCA 72 bp | CCCGGAAGGCTTCGCAGTCCTCACGCCGGTTCCCGCTaGCTCCGCAGTCGCACCAGGGCGCCACGCGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: PGRLRSPHAGSR*LRSRTRAPRAR Trigger: GCGCGCGCGTGGCGCCCTGGTGCGACTGCGGAGCCAGCGGGAACCGGCGTGAGGACTGCGAAGCCTTCCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| CDS CCA 72 bp | GGGCGCCCTGGTCCAGCAGGCAGCCGTCGGGGGCGCTaGGCGCTGGGGTGCACGAGACCTGAAAGGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: GRPGPAGSRRGR*ALGCTRPERPG Trigger: TCCTGGCCTTTCAGGTCTCGTGCACCCCAGCGCCCAGCGCCCCCGACGGCTGCCTGCTGGACCAGGGCGCCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000290417.7 ENST00000319242.8 ENST00000477160.1 |
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| CDS CCA 72 bp | CCCAGGCACTGCGCCACATACTCGGAGCGCAAACGCTaGCACCGCGCGTCCGCCGTGCAGGCTTCGGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: PRHCATYSERKR*HRASAVQASAA Trigger: CGCGGCCGAAGCCTGCACGGCGGACGCGCGGTGCCAGCGTTTGCGCTCCGAGTATGTGGCGCAGTGCCTGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000290417.7 ENST00000319242.8 ENST00000477160.1 |
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| CDS CCA 72 bp | CTGGTCCAGCAGGCAGCCGTCGGGGGCGCTGGGCGCTaGGGTGCACGAGACCTGAAAGGCCAGGAGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: LVQQAAVGGAGR*GARDLKGQEAR Trigger: CCTCGCCTCCTGGCCTTTCAGGTCTCGTGCACCCCAGCGCCCAGCGCCCCCGACGGCTGCCTGCTGGACCAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000290417.7 ENST00000319242.8 ENST00000477160.1 |
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| CDS GCA 72 bp | ACTCGGAGCGCAAACGCTGGCACCGCGCGTCCGCCGTaGAGGCTTCGGCCGCGTCCACACATCGGTTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: TRSANAGTARPP*RLRPRPHIGSL Trigger: GAGGGAACCGATGTGTGGACGCGGCCGAAGCCTGCACGGCGGACGCGCGGTGCCAGCGTTTGCGCTCCGAGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000290417.7 ENST00000319242.8 ENST00000477160.1 |
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| CDS CCA 72 bp | CGGGTCTCCCTGGGGGTTCAGCTGGTCCAGCAGGACTaGGGGCCACCCGCTGGCAAAGGCCTGAATGGCACC | + |
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Preference number: 6 (lower is better) Translates to: RVSLGVQLVQQD*GPPAGKGLNGT Trigger: GGTGCCATTCAGGCCTTTGCCAGCGGGTGGCCCCCAGTCCTGCTGGACCAGCTGAACCCCCAGGGAGACCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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| CDS CCA 72 bp | GGTTCAGCTGGTCCAGCAGGACTGGGGGCCACCCGCTaGCAAAGGCCTGAATGGCACCATCCAAGCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: GSAGPAGLGATR*QRPEWHHPSSG Trigger: ACCGCTGCTTGGATGGTGCCATTCAGGCCTTTGCCAGCGGGTGGCCCCCAGTCCTGCTGGACCAGCTGAACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290417.7 ENST00000319242.8 |
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