RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GFRA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000146013

Ensembl transcript IDs: ENST00000274721.8, ENST00000378362.3

Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTaGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCCT +
Preference number: 1 (lower is better)
Translates to: AHCTSFLLLSFPHPL*AASPPGCGGGEEGP
Trigger: AGGGCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR GCA 90 bp AAGGATCTGGAGGTCATAACCCTTAGCTTCTCCTGTGCCCTCATCTaGGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTT +
Preference number: 1 (lower is better)
Translates to: KDLEVITLSFSCALI*ALHLLPAAVLSSPL
Trigger: AAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAGGAGAAGCTAAGGGTTATGACCTCCAGATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR CAA 90 bp TCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTaGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGC +
Preference number: 2 (lower is better)
Translates to: SAHCTSFLLLSFPHP*WAASPPGCGGGEEG
Trigger: GCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR GCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGTCACCCCTTGTGGGCTaGAAGTCCACCTGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQSPLVG*KSTWVW
Trigger: CCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGA...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR GCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGTCCTGTGCCCTCATCTaGGCACTGCACCTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQSCALI*ALHLLP
Trigger: AGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAGGA...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR CCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGTTTCCTCACCCCTTGTaGGCTGCAAGTCCACCTGGG +
Preference number: 2 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQFPHPL*AASPPG
Trigger: CCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAA...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR GCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGACTGCACCTCCTTCCTaGTGCTGTCCTTTCCTCACC +
Preference number: 2 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQTAPPS*CCPFLT
Trigger: GGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGT...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR CCA 90 bp GCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGGCTGCAAGTCCACCTaGGTGTGGTGGAGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: ALICALHLLPAAVLSSPLGCKST*VWWRGR
Trigger: TCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCC...AAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR TCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGCTTCACAAAGGAGAATaGCTTTCTAGGCTGCCTCAG +
Preference number: 2 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQLHKGE*LSRLPQ
Trigger: CTGAGGCAGCCTAGAAAGTCATTCTCCTTTGTGAAG...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR GCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGAATGACTTTCTAGGCTaGCTCAGAACACCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQNDFLG*LRTPSP
Trigger: AGGACTGGGTGTTCTGAGGCAGCCTAGAAAGTCATT...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR GCA 90 bp TCAGAGGAGGAGACGAGGGGGCAGGAGCCTTCTTCACAAAGGAGAATGACTTTCTCACCCCTTGTGGGCTaGAAGTCCACCTGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: SEEETRGQEPSSQRRMTFSPLVG*KSTWVW
Trigger: CCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGA...GAAAGTCATTCTCCTTTGTGAAGAAGGCTCCTGCCCCCTCGTCTCCTCCTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR CCA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGAATCAGAAGTGGAGATaGGGTGGAGGGAATGAGGAC +
Preference number: 2 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGNQKWR*GGGNED
Trigger: GTCCTCATTCCCTCCACCCCATCTCCACTTCTGATT...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR CCA 90 bp TCAGAGGAGGAGACGAGGGGGCAGGAGCCTTCTTCACAAAGGAGAATGACTTTCGGGGCTTGGTGGAGCTaGTCACCACCAGATGACATG +
Preference number: 2 (lower is better)
Translates to: SEEETRGQEPSSQRRMTFGAWWS*SPPDDM
Trigger: CATGTCATCTGGTGGTGACCAGCTCCACCAAGCCCC...GAAAGTCATTCTCCTTTGTGAAGAAGGCTCCTGCCCCCTCGTCTCCTCCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR CCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGACCCTAACCCTAATCTaGAATGCAATAGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQTLTLI*NAIENG
Trigger: GCCATTCTCTATTGCATTCCAGATTAGGGTTAGGGT...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR CAA 90 bp AAAGGGGCTTGGTGGAGCTGGTCACCACCAGATGACATGGCTAAATaGTGGCCACCAAGGAGGGGCAGCATGAATCAGAAGTGGAGATGG +
Preference number: 2 (lower is better)
Translates to: KGAWWSWSPPDDMAK*WPPRRGSMNQKWRW
Trigger: CCATCTCCACTTCTGATTCATGCTGCCCCTCCTTGGTGGCCACAATTTAGCCATGTCATCTGGTGGTGACCAGCTCCACCAAGCCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR GCA 90 bp GGTGGAGGGAATGAGGACTGGACCAGTAAGGATCTGGAGGTCATAACCCTTAGCACTGCACCTCCTTCCTaGTGCTGTCCTTTCCTCACC +
Preference number: 2 (lower is better)
Translates to: GGGNEDWTSKDLEVITLSTAPPS*CCPFLT
Trigger: GGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGT...GCTAAGGGTTATGACCTCCAGATCCTTACTGGTCCAGTCCTCATTCCCTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR CCA 90 bp TTTAGGACAATAATAGGAATAAAGCAAGGCCCACAGGCTCCAGCTCCTGATGCCGACATGGCTAAATTGTaGCCACCAAGGAGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: FRTIIGIKQGPQAPAPDADMAKL*PPRRGS
Trigger: GCTGCCCCTCCTTGGTGGCCACAATTTAGCCATGTC...GGCATCAGGAGCTGGAGCCTGTGGGCCTTGCTTTATTCCTATTATTGTCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR CCA 90 bp TTTAGGACAATAATAGGAATAAAGCAAGGCCCACAGGCTCCAGCTCCTGATGCCGGAGGGAATGAGGACTaGACCAGTAAGGATCTGGAG +
Preference number: 2 (lower is better)
Translates to: FRTIIGIKQGPQAPAPDAGGNED*TSKDLE
Trigger: CTCCAGATCCTTACTGGTCCAGTCCTCATTCCCTCC...GGCATCAGGAGCTGGAGCCTGTGGGCCTTGCTTTATTCCTATTATTGTCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR CAA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGGATGACATGGCTAAATaGTGGCCACCAAGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQDDMAK*WPPRRG
Trigger: GCCCCTCCTTGGTGGCCACAATTTAGCCATGTCATC...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR TCA 72 bp AGACGAGGGGGCAGGAGCCTTCTTCACAAAGGAGAATaGCTTTCTAGGCTGCCTCAGAACACCCAGTCCTCC +
Preference number: 3 (lower is better)
Translates to: RRGGRSLLHKGE*LSRLPQNTQSS
Trigger: GGAGGACTGGGTGTTCTGAGGCAGCCTAGAAAGTCATTCTCCTTTGTGAAGAAGGCTCCTGCCCCCTCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR-3UTR CAA 90 bp TCAGAGGAGGAGACGAGGGGGCAGGAGCCTTCTTCACAAAGGAGAATGACTTTCGATGACATGGCTAAATaGTGGCCACCAAGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: SEEETRGQEPSSQRRMTFDDMAK*WPPRRG
Trigger: GCCCCTCCTTGGTGGCCACAATTTAGCCATGTCATC...GAAAGTCATTCTCCTTTGTGAAGAAGGCTCCTGCCCCCTCGTCTCCTCCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR CCA 72 bp TGGAGCTGGTCACCACCAGATGACATGGCTAAATTGTaGCCACCAAGGAGGGGCAGCATGAATCAGAAGTGG +
Preference number: 3 (lower is better)
Translates to: WSWSPPDDMAKL*PPRRGSMNQKW
Trigger: CCACTTCTGATTCATGCTGCCCCTCCTTGGTGGCCACAATTTAGCCATGTCATCTGGTGGTGACCAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCACGTGGCGCTGGCAGTaGGGCCCGGAGCACGCCTCC +
Preference number: 4 (lower is better)
Translates to: LTPCGLQVHLGVVEGKRATWRWQ*GPEHAS
Trigger: GGAGGCGTGCTCCGGGCCCCACTGCCAGCGCCACGT...GGCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGCAGGCCCTGCGCGTaGGGCTCGGCGGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PFLTPCGLQVHLGVVEGKSRPCA*GSAAFS
Trigger: CGAGAAGGCCGCCGAGCCCCACGCGCAGGGCCTGCT...CTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGACACAGTAGCAGGCCCTaGGCGTGGGGCTCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LLSFPHPLWAASPPGCGGHSSRP*AWGSAA
Trigger: GGCCGCCGAGCCCCACGCGCAGGGCCTGCTACTGTG...TCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGCACAGTAGCAGGCCCTaGGCGTGGGGCTCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVHSSRP*AWGSAA
Trigger: GGCCGCCGAGCCCCACGCGCAGGGCCTGCTACTGTG...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp ATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGGGGGCGATGGTGTTaGGCCGGCGCTCCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ICALHLLPAAVLSSPLVGWGRWC*AGAPRS
Trigger: GCTGCGGGGAGCGCCGGCGCAACACCATCGCCCCCA...GCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAACGTGGCGCTGGCAGTaGGGCCCGGAGCACGCCTCC +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGETWRWQ*GPEHAS
Trigger: GGAGGCGTGCTCCGGGCCCCACTGCCAGCGCCACGT...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGTGGGGGCGATGGTGTTaGGCCGGCGCTCCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGWGRWC*AGAPRS
Trigger: GCTGCGGGGAGCGCCGGCGCAACACCATCGCCCCCA...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTCAGGGGGCGCACCATaGCGAGCTGTAGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: HLLPAAVLSSPLVGCKSTSGGAP*RAVGAG
Trigger: CCCGGCGCCTACAGCTCGCCATGGTGCGCCCCCTGA...GGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGAGCAGGCCCTGCGCGTaGGGCTCGGCGGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGSRPCA*GSAAFS
Trigger: CGAGAAGGCCGCCGAGCCCCACGCGCAGGGCCTGCT...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAACGCAGTTGGGGGCGATaGTGTTGCGCCGGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGERSWGR*CCAGAP
Trigger: GGGAGCGCCGGCGCAACACCATCGCCCCCAACTGCG...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGCGGCAGCGCGCAGTTaGGGGCGATGGTGTTGCGCC +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGEAAARS*GRWCCA
Trigger: GGCGCAACACCATCGCCCCCAACTGCGCGCTGCCGC...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp ATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCGCGGCAGCGCGCAGTTaGGGGCGATGGTGTTGCGCC +
Preference number: 4 (lower is better)
Translates to: ICALHLLPAAVLSSPLVGAAARS*GRWCCA
Trigger: GGCGCAACACCATCGCCCCCAACTGCGCGCTGCCGC...GCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCCCTGAGTTGCTGTGCTaGCTCCAGGCAGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LTPCGLQVHLGVVEGKRAPELLC*LQAVSR
Trigger: CCTGCTGACTGCCTGGAGGCAGCACAGCAACTCAGG...GGCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGCTCCCACCAGGGTCCTaGGCGCCGCCCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGLPPGS*APPSNS
Trigger: GGAGTTGGAGGGCGGCGCCCAGGACCCTGGTGGGAG...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274721.8
CDS-3UTR CCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGCAGGTGGGATCAGCCTaGCACTTCCTCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQQVGSA*HFLLAW
Trigger: CCAGGCCAGGAGGAAGTGCCAGGCTGATCCCACCTG...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGGGTGGTAGGCAGCACTaGAGGTGGGATCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PFLTPCGLQVHLGVVEGKGGRQH*RWDQPG
Trigger: GCCAGGCTGATCCCACCTGCAGTGCTGCCTACCACC...CTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCCAACCTGGTTCTTCATaGGCCGGTGGCACATGCAGC +
Preference number: 4 (lower is better)
Translates to: LTPCGLQVHLGVVEGKRAQPGSS*AGGTCS
Trigger: GCTGCATGTGCCACCGGCGCATGAAGAACCAGGTTG...GGCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp ATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCCGCAGCCCCGGTCGTTaGGGGCACATGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: ICALHLLPAAVLSSPLVGRSPGR*GHMGTV
Trigger: TACTGTGCCCATGTGCCCCCAACGACCGGGGCTGCG...GCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGGGGCACCCAGGGCTGTaGCCTCACAGCAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: PFLTPCGLQVHLGVVEGKGHPGL*PHSRVF
Trigger: GAAAACCCTGCTGTGAGGCCACAGCCCTGGGTGCCC...CTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp ATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCGGTGGTAGGCAGCACTaGAGGTGGGATCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ICALHLLPAAVLSSPLVGGGRQH*RWDQPG
Trigger: GCCAGGCTGATCCCACCTGCAGTGCTGCCTACCACC...GCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGTGCGCCGGTGGCACATaGAGCCTATCAGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQCAGGT*SLSESC
Trigger: ACAGCTCTCTGATAGGCTGCATGTGCCACCGGCGCA...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGAAGAAAGTGAGCAGCTaGCTGAGGCAGACGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQKKVSS*LRQTWR
Trigger: GCGCCACGTCTGCCTCAGGCAGCTGCTCACTTTCTT...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCACTCCTCCTGCAGGTTaGCACTGCCTCGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LCPHLRTAPPSCCCPFLTTPPAG*HCLGRC
Trigger: GCACCTGCCGAGGCAGTGGCAACCTGCAGGAGGAGT...GGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCCAGGTGGGATCAGCCTaGCACTTCCTCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HLLPAAVLSSPLVGCKSTQVGSA*HFLLAW
Trigger: CCAGGCCAGGAGGAAGTGCCAGGCTGATCCCACCTG...GGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGTCCAAGCAGGCAACCTaGTTCTTCATGCGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQSKQAT*FFMRRW
Trigger: CCACCGGCGCATGAAGAACCAGGTTGCCTGCTTGGA...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCTCCATGGGATGGCAGTaGGTCTGGAAATCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LTPCGLQVHLGVVEGKRASMGWQ*VWKSTR
Trigger: CCTGGTGGATTTCCAGACCCACTGCCATCCCATGGA...GGCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp GCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGGGCACCCAGGGCTGTaGCCTCACAGCAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: ALICALHLLPAAVLSSPLGHPGL*PHSRVF
Trigger: GAAAACCCTGCTGTGAGGCCACAGCCCTGGGTGCCC...AAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR TCA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGGACCGAAGGCTCCTCTaGGGGCAGTGGGGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVDRRLL*GQWGAY
Trigger: ATAAGCACCCCACTGCCCTCAGAGGAGCCTTCGGTC...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR TCA 90 bp GCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGACCGAAGGCTCCTCTaGGGGCAGTGGGGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: ALICALHLLPAAVLSSPLDRRLL*GQWGAY
Trigger: ATAAGCACCCCACTGCCCTCAGAGGAGCCTTCGGTC...AAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp ATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCCCTGAGTTGCTGTGCTaGCTCCAGGCAGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ICALHLLPAAVLSSPLVGPELLC*LQAVSR
Trigger: CCTGCTGACTGCCTGGAGGCAGCACAGCAACTCAGG...GCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGGAGCTGTTCCTGAGTTaGTGTGCTGCCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PFLTPCGLQVHLGVVEGKELFLS*CAASRQ
Trigger: CTGCCTGGAGGCAGCACAGCAACTCAGGAACAGCTC...CTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGCAACCTGGTTCTTCATaGGCCGGTGGCACATGCAGC +
Preference number: 4 (lower is better)
Translates to: PFLTPCGLQVHLGVVEGKQPGSS*AGGTCS
Trigger: GCTGCATGTGCCACCGGCGCATGAAGAACCAGGTTG...CTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTGCAGGTTGCCACTaGCTCGGCAGGTGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LCPHLRTAPPSCCCPFLTPAGCH*LGRCSL
Trigger: TAAGCTGCACCTGCCGAGGCAGTGGCAACCTGCAGG...GGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCTCACCCCTTGTGGGCTaGAAGTCCACCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LCPHLRTAPPSCCCPFLTSPLVG*KSTWVW
Trigger: CCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGA...GGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTCACCCCTTGTGGGCTaGAAGTCCACCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVSPLVG*KSTWVW
Trigger: CCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGA...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCCTCATCTGCGCACTaGACCTCCTTCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LCPHLRTAPPSCCCPFLTPSSAH*TSFLLL
Trigger: CAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGG...GGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp GGTGGAGGGAATGAGGACTGGACCAGTAAGGATCTGGAGGTCATAACCCTTAGCTCAGGGGGCGCACCATaGCGAGCTGTAGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: GGGNEDWTSKDLEVITLSSGGAP*RAVGAG
Trigger: CCCGGCGCCTACAGCTCGCCATGGTGCGCCCCCTGA...GCTAAGGGTTATGACCTCCAGATCCTTACTGGTCCAGTCCTCATTCCCTCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCCACTTCCTCCTGGCCTaGAGACAGCTGTTCATGAGT +
Preference number: 4 (lower is better)
Translates to: LTPCGLQVHLGVVEGKRAHFLLA*RQLFMS
Trigger: ACTCATGAACAGCTGTCTCCAGGCCAGGAGGAAGTG...GGCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGGCTGCAAGTCCACCTaGGTGTGGTGGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGEGCKST*VWWRGR
Trigger: TCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCC...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGCAGAAAGGGGCTTGGTaGAGCTGGTCACCACCAGAT +
Preference number: 4 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQQKGAW*SWSPPD
Trigger: ATCTGGTGGTGACCAGCTCCACCAAGCCCCTTTCTG...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR TCA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGGGAGACAGCTGTTCATaGGTCGGCTTTCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQGDSCS*VGFLWE
Trigger: TTCCCACAGAAAGCCGACTCATGAACAGCTGTCTCC...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR TCA 90 bp CCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGTCAGAGAGCTGTTCCTaGGTTGCTGTGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PFLTPCGLQVHLGVVEGKSESCS*VAVLPP
Trigger: TGGAGGCAGCACAGCAACTCAGGAACAGCTCTCTGA...CTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCGAGCTGTTCCTGAGTTaGTGTGCTGCCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HLLPAAVLSSPLVGCKSTELFLS*CAASRQ
Trigger: CTGCCTGGAGGCAGCACAGCAACTCAGGAACAGCTC...GGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGCATAGTTACCAAGGCTaGGGGCACGGTGAACGGTCC +
Preference number: 4 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVHSYQG*GHGERS
Trigger: GGACCGTTCACCGTGCCCGCAGCCTTGGTAACTATG...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274721.8
CDS-3UTR GCA 90 bp CTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCACTGCCTCGGCAGGTaGAGCTTAAGGCAACACTGG +
Preference number: 4 (lower is better)
Translates to: LCPHLRTAPPSCCCPFLTHCLGR*SLRQHW
Trigger: CCAGTGTTGCCTTAAGCTGCACCTGCCGAGGCAGTG...GGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp TCCTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCTGCAGGTTGCCACTaGCTCGGCAGGTGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: SCALICALHLLPAAVLSSPAGCH*LGRCSL
Trigger: TAAGCTGCACCTGCCGAGGCAGTGGCAACCTGCAGG...TGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCAAAACGCATCTTAGCTaGAATGGCCTCCGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LTPCGLQVHLGVVEGKRAKTHLS*NGLREA
Trigger: TGCCTCACGGAGGCCATTGCAGCTAAGATGCGTTTT...GGCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCGAATCAAGGGAAGCGTaGAGGAGAAAAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LTPCGLQVHLGVVEGKRAESREA*RRKERA
Trigger: TGCCCTCTCTTTTCTCCTGCACGCTTCCCTTGATTC...GGCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGCCCTCATCTGCGCACTaGACCTCCTTCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGPSSAH*TSFLLL
Trigger: CAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGG...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGATCCTGTGCCCTCATCTaGGCACTGCACCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLSFPHPLWAASPPGCGGSCALI*ALHLLP
Trigger: AGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAGGA...TCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGCCTGGCACTTCCTCCTaGCCTGGAGACAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVPGTSS*PGDSCS
Trigger: TGAACAGCTGTCTCCAGGCCAGGAGGAAGTGCCAGG...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAATCCAAGCAGGCAACCTaGTTCTTCATGCGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGESKQAT*FFMRRW
Trigger: CCACCGGCGCATGAAGAACCAGGTTGCCTGCTTGGA...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGCAAAGGTAGGGTGTaGCCAGTCCTGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PFLTPCGLQVHLGVVEGKSKGRV*PVLGEE
Trigger: CTCTTCTCCCAGGACTGGCCACACCCTACCTTTGCT...CTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCGGGGCTTGGTGGAGCTaGTCACCACCAGATGACATG +
Preference number: 4 (lower is better)
Translates to: HLLPAAVLSSPLVGCKSTGAWWS*SPPDDM
Trigger: CATGTCATCTGGTGGTGACCAGCTCCACCAAGCCCC...GGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR TCA 90 bp CTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCGAGAAGAGTTGGCTGTaGAAACGCATCTTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LTPCGLQVHLGVVEGKRAEKSWL*KRILAA
Trigger: TGCAGCTAAGATGCGTTTTCACAGCCAACTCTTCTC...GGCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp TCCTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCAGTTCCTGAGTTGCTGTaGTGCCTCCAGGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SCALICALHLLPAAVLSSVPELL*CLQAVS
Trigger: GCTGACTGCCTGGAGGCAGCACAGCAACTCAGGAAC...TGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp TCCTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACACTGCCTCGGCAGGTaGAGCTTAAGGCAACACTGG +
Preference number: 4 (lower is better)
Translates to: SCALICALHLLPAAVLSSHCLGR*SLRQHW
Trigger: CCAGTGTTGCCTTAAGCTGCACCTGCCGAGGCAGTG...TGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAATTTCACACTCCTCCTaGAGGTTGCCACTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGEISHSS*RLPLPR
Trigger: CCGAGGCAGTGGCAACCTGCAGGAGGAGTGTGAAAT...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGTCCTGTGCCCTCATCTaGGCACTGCACCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGSCALI*ALHLLP
Trigger: AGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAGGA...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCAATGACTTTCTAGGCTaGCTCAGAACACCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LTPCGLQVHLGVVEGKRANDFLG*LRTPSP
Trigger: AGGACTGGGTGTTCTGAGGCAGCCTAGAAAGTCATT...GGCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGCCTGGCACTTCCTCCTaGCCTGGAGACAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGPGTSS*PGDSCS
Trigger: TGAACAGCTGTCTCCAGGCCAGGAGGAAGTGCCAGG...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGTTCTTCATGCGCCGGTaGCACATGCAGCCTATCAGA +
Preference number: 4 (lower is better)
Translates to: PFLTPCGLQVHLGVVEGKFFMRR*HMQPIR
Trigger: TCTGATAGGCTGCATGTGCCACCGGCGCATGAAGAA...CTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTCCATGGGATGGCAGTaGGTCTGGAAATCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVSMGWQ*VWKSTR
Trigger: CCTGGTGGATTTCCAGACCCACTGCCATCCCATGGA...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGATGTCCATGGGATaGCAGTGGGTCTGGAAATCC +
Preference number: 4 (lower is better)
Translates to: PFLTPCGLQVHLGVVEGKRMSMG*QWVWKS
Trigger: GGATTTCCAGACCCACTGCCATCCCATGGACATCCT...CTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAACAAAGTTGGGGGTCATaGCAGTCCCAATCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGEQSWGS*QSQSAP
Trigger: TGGGGCTGATTGGGACTGCCATGACCCCCAACTTTG...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGACAAAGTTGGGGGTCATaGCAGTCCCAATCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLSFPHPLWAASPPGCGGQSWGS*QSQSAP
Trigger: TGGGGCTGATTGGGACTGCCATGACCCCCAACTTTG...TCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGGTGAGGCAGGGGTTGTaGGAGAAGAACCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGVRQGL*EKNPSS
Trigger: GCTGGAAGGGTTCTTCTCCCACAACCCCTGCCTCAC...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCAGTGAGGCAGGGGTTGTaGGAGAAGAACCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SCALICALHLLPAAVLSSVRQGL*EKNPSS
Trigger: GCTGGAAGGGTTCTTCTCCCACAACCCCTGCCTCAC...TGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAAGCAAAGGTAGGGTGTaGCCAGTCCTGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLSFPHPLWAASPPGCGGSKGRV*PVLGEE
Trigger: CTCTTCTCCCAGGACTGGCCACACCCTACCTTTGCT...TCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCATTTCCTCACCCCTTGTaGGCTGCAAGTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: SCALICALHLLPAAVLSSFPHPL*AASPPG
Trigger: CCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAA...TGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGACATGGCTAAATTGTaGCCACCAAGGAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGEDMAKL*PPRRGS
Trigger: GCTGCCCCTCCTTGGTGGCCACAATTTAGCCATGTC...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp GCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGACATGGCTAAATTGTaGCCACCAAGGAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ALICALHLLPAAVLSSPLDMAKL*PPRRGS
Trigger: GCTGCCCCTCCTTGGTGGCCACAATTTAGCCATGTC...AAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCAGGGGCTTGGTGGAGCTaGTCACCACCAGATGACATG +
Preference number: 4 (lower is better)
Translates to: SCALICALHLLPAAVLSSGAWWS*SPPDDM
Trigger: CATGTCATCTGGTGGTGACCAGCTCCACCAAGCCCC...TGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR TCA 90 bp CACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCACAGCATGGCAAACTTaGGGCAGAGGTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: HLLPAAVLSSPLVGCKSTTAWQT*GRGLSL
Trigger: CAGACTCAGACCTCTGCCTCAAGTTTGCCATGCTGT...GGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274721.8
CDS-3UTR GCA 90 bp TCAGAGGAGGAGACGAGGGGGCAGGAGCCTTCTTCACAAAGGAGAATGACTTTCACTCCTCCTGCAGGTTaGCACTGCCTCGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SEEETRGQEPSSQRRMTFTPPAG*HCLGRC
Trigger: GCACCTGCCGAGGCAGTGGCAACCTGCAGGAGGAGT...GAAAGTCATTCTCCTTTGTGAAGAAGGCTCCTGCCCCCTCGTCTCCTCCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAACACTTCCTCCTGGCCTaGAGACAGCTGTTCATGAGT +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGEHFLLA*RQLFMS
Trigger: ACTCATGAACAGCTGTCTCCAGGCCAGGAGGAAGTG...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TTTAGGACAATAATAGGAATAAAGCAAGGCCCACAGGCTCCAGCTCCTGATGCCCGCAGTTGGGGGCGATaGTGTTGCGCCGGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: FRTIIGIKQGPQAPAPDARSWGR*CCAGAP
Trigger: GGGAGCGCCGGCGCAACACCATCGCCCCCAACTGCG...GGCATCAGGAGCTGGAGCCTGTGGGCCTTGCTTTATTCCTATTATTGTCCTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAAGGATGTCCATGGGATaGCAGTGGGTCTGGAAATCC +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGERMSMG*QWVWKS
Trigger: GGATTTCCAGACCCACTGCCATCCCATGGACATCCT...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp GCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTTTCCTAGGATGTCCATaGGATGGCAGTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ALICALHLLPAAVLSSPLFLGCP*DGSGSG
Trigger: TCCAGACCCACTGCCATCCCATGGACATCCTAGGAA...AAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCGGAGGGAATGAGGACTaGACCAGTAAGGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: HLLPAAVLSSPLVGCKSTGGNED*TSKDLE
Trigger: CTCCAGATCCTTACTGGTCCAGTCCTCATTCCCTCC...GGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp ATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCGGAGGGAATGAGGACTaGACCAGTAAGGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: ICALHLLPAAVLSSPLVGGGNED*TSKDLE
Trigger: CTCCAGATCCTTACTGGTCCAGTCCTCATTCCCTCC...GCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp CCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAATCAGAAGTGGAGATaGGGTGGAGGGAATGAGGAC +
Preference number: 4 (lower is better)
Translates to: PFLTPCGLQVHLGVVEGKNQKWR*GGGNED
Trigger: GTCCTCATTCCCTCCACCCCATCTCCACTTCTGATT...CTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGCAGAAAGGGGCTTGGTaGAGCTGGTCACCACCAGAT +
Preference number: 4 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGQKGAW*SWSPPD
Trigger: ATCTGGTGGTGACCAGCTCCACCAAGCCCCTTTCTG...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR TCA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGCTTGAGGCAGAGGTCTaGGTCTGGTTTGAGCATGTT +
Preference number: 4 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVLEAEV*VWFEHV
Trigger: AACATGCTCAAACCAGACTCAGACCTCTGCCTCAAG...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274721.8
CDS-3UTR TCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAACAGCATGGCAAACTTaGGGCAGAGGTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGETAWQT*GRGLSQ
Trigger: TTGACTCAGACCTCTGCCTCAAGTTTGCCATGCTGT...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378362.3
CDS-3UTR CCA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGTTCCTAGGATGTCCATaGGATGGCAGTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGFLGCP*DGSGSG
Trigger: TCCAGACCCACTGCCATCCCATGGACATCCTAGGAA...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCAGAGGAGGAGACGAGGGGGCAGGAGCCTTCTTCACAAAGGAGAATGACTTTCGGCTGCAAGTCCACCTaGGTGTGGTGGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SEEETRGQEPSSQRRMTFGCKST*VWWRGR
Trigger: TCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCC...GAAAGTCATTCTCCTTTGTGAAGAAGGCTCCTGCCCCCTCGTCTCCTCCTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR TCA 90 bp GCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGGTCACACTTGTCATTaGGAGTACACAGCATGGCAA +
Preference number: 4 (lower is better)
Translates to: ALICALHLLPAAVLSSPLGHTCH*EYTAWQ
Trigger: TTGCCATGCTGTGTACTCTCAATGACAAGTGTGACC...AAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR TCA 90 bp GCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGAGAAGAGTTGGCTGTaGAAACGCATCTTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ALICALHLLPAAVLSSPLEKSWL*KRILAA
Trigger: TGCAGCTAAGATGCGTTTTCACAGCCAACTCTTCTC...AAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR TCA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGCTTCACAAAGGAGAATaGCTTTCTAGGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVLHKGE*LSRLPQ
Trigger: CTGAGGCAGCCTAGAAAGTCATTCTCCTTTGTGAAG...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAACGTAGACATCTGGACTaGTCTGTTGCACAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGERRHLD*SVAQVP
Trigger: AGGAACTTGTGCAACAGAGCAGTCCAGATGTCTACG...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGGAATCAAGGGAAGCGTaGAGGAGAAAAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGESREA*RRKERA
Trigger: TGCCCTCTCTTTTCTCCTGCACGCTTCCCTTGATTC...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TTTAGGACAATAATAGGAATAAAGCAAGGCCCACAGGCTCCAGCTCCTGATGCCCGCAGCCCCGGTCGTTaGGGGCACATGGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: FRTIIGIKQGPQAPAPDARSPGR*GHMGTV
Trigger: TACTGTGCCCATGTGCCCCCAACGACCGGGGCTGCG...GGCATCAGGAGCTGGAGCCTGTGGGCCTTGCTTTATTCCTATTATTGTCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAATGCTCGTAGACATCTaGACTGCTCTGTTGCACAAG +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGEMLVDI*TALLHK
Trigger: CTTGTGCAACAGAGCAGTCCAGATGTCTACGAGCAT...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCAGAGGAGGAGACGAGGGGGCAGGAGCCTTCTTCACAAAGGAGAATGACTTTCAGGGGAAGAGGGCCCTaGGGAAGTCCAGCTACCATA +
Preference number: 4 (lower is better)
Translates to: SEEETRGQEPSSQRRMTFRGRGP*GSPATI
Trigger: TATGGTAGCTGGACTTCCCCAGGGCCCTCTTCCCCT...GAAAGTCATTCTCCTTTGTGAAGAAGGCTCCTGCCCCCTCGTCTCCTCCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCAGAGGAGGAGACGAGGGGGCAGGAGCCTTCTTCACAAAGGAGAATGACTTTCTTTCCTCACCCCTTGTaGGCTGCAAGTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: SEEETRGQEPSSQRRMTFFPHPL*AASPPG
Trigger: CCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAA...GAAAGTCATTCTCCTTTGTGAAGAAGGCTCCTGCCCCCTCGTCTCCTCCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAACACCACCAGATGACATaGCTAAATTGTGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: SFPHPLWAASPPGCGGGEHHQMT*LNCGHQ
Trigger: TTGGTGGCCACAATTTAGCCATGTCATCTGGTGGTG...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp GGTGGAGGGAATGAGGACTGGACCAGTAAGGATCTGGAGGTCATAACCCTTAGCATTTCACACTCCTCCTaGAGGTTGCCACTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GGGNEDWTSKDLEVITLSISHSS*RLPLPR
Trigger: CCGAGGCAGTGGCAACCTGCAGGAGGAGTGTGAAAT...GCTAAGGGTTATGACCTCCAGATCCTTACTGGTCCAGTCCTCATTCCCTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp TCAGAGGAGGAGACGAGGGGGCAGGAGCCTTCTTCACAAAGGAGAATGACTTTCACTGCACCTCCTTCCTaGTGCTGTCCTTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: SEEETRGQEPSSQRRMTFTAPPS*CCPFLT
Trigger: GGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGT...GAAAGTCATTCTCCTTTGTGAAGAAGGCTCCTGCCCCCTCGTCTCCTCCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp TTTAGGACAATAATAGGAATAAAGCAAGGCCCACAGGCTCCAGCTCCTGATGCCGGTCTGAGTCAAGGCTaGGGGCACGGTGAACGGTCC +
Preference number: 4 (lower is better)
Translates to: FRTIIGIKQGPQAPAPDAGLSQG*GHGERS
Trigger: GGACCGTTCACCGTGCCCGCAGCCTTGACTCAGACC...GGCATCAGGAGCTGGAGCCTGTGGGCCTTGCTTTATTCCTATTATTGTCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378362.3
CDS-3UTR CCA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGGCAGGGTTTTCATTCTaGTGTGCCATCACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGAGFSF*CAITAK
Trigger: CTTTGCTGTGATGGCACACCAGAATGAAAACCCTGC...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TCCTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACACCACCAGATGACATaGCTAAATTGTGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: SCALICALHLLPAAVLSSHHQMT*LNCGHQ
Trigger: TTGGTGGCCACAATTTAGCCATGTCATCTGGTGGTG...TGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
3UTR CAA 72 bp TGGTGGAGCTGGTCACCACCAGATGACATGGCTAAATaGTGGCCACCAAGGAGGGGCAGCATGAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: WWSWSPPDDMAK*WPPRRGSMNQK
Trigger: CTTCTGATTCATGCTGCCCCTCCTTGGTGGCCACAATTTAGCCATGTCATCTGGTGGTGACCAGCTCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR TCA 90 bp TCAGAGGAGGAGACGAGGGGGCAGGAGCCTTCTTCACAAAGGAGAATGACTTTCGGAGACAGCTGTTCATaGGTCGGCTTTCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SEEETRGQEPSSQRRMTFGDSCS*VGFLWE
Trigger: TTCCCACAGAAAGCCGACTCATGAACAGCTGTCTCC...GAAAGTCATTCTCCTTTGTGAAGAAGGCTCCTGCCCCCTCGTCTCCTCCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp ATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTCATTTTCCAGGGTTTaGTGGTCACTGTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: ICALHLLPAAVLSSPLVGSFSRV*WSLCLH
Trigger: ATGAAGACACAGTGACCAGCAAACCCTGGAAAATGA...GCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274721.8
CDS-3UTR CCA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGACCCTAACCCTAATCTaGAATGCAATAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVTLTLI*NAIENG
Trigger: GCCATTCTCTATTGCATTCCAGATTAGGGTTAGGGT...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp TTTAGGACAATAATAGGAATAAAGCAAGGCCCACAGGCTCCAGCTCCTGATGCCAAGAAAGTGAGCAGCTaGCTGAGGCAGACGTGGCGC +
Preference number: 4 (lower is better)
Translates to: FRTIIGIKQGPQAPAPDAKKVSS*LRQTWR
Trigger: GCGCCACGTCTGCCTCAGGCAGCTGCTCACTTTCTT...GGCATCAGGAGCTGGAGCCTGTGGGCCTTGCTTTATTCCTATTATTGTCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp GGTGGAGGGAATGAGGACTGGACCAGTAAGGATCTGGAGGTCATAACCCTTAGCAAAACGCATCTTAGCTaGAATGGCCTCCGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GGGNEDWTSKDLEVITLSKTHLS*NGLREA
Trigger: TGCCTCACGGAGGCCATTGCAGCTAAGATGCGTTTT...GCTAAGGGTTATGACCTCCAGATCCTTACTGGTCCAGTCCTCATTCCCTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp TTTAGGACAATAATAGGAATAAAGCAAGGCCCACAGGCTCCAGCTCCTGATGCCACTGCACCTCCTTCCTaGTGCTGTCCTTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: FRTIIGIKQGPQAPAPDATAPPS*CCPFLT
Trigger: GGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGT...GGCATCAGGAGCTGGAGCCTGTGGGCCTTGCTTTATTCCTATTATTGTCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp CTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCAACCCTAATCTGGAATaGAATAGAGAATGGCTAACT +
Preference number: 4 (lower is better)
Translates to: LCPHLRTAPPSCCCPFLTNPNLE*NREWLT
Trigger: AGTTAGCCATTCTCTATTGCATTCCAGATTAGGGTT...GGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp TCAGAGGAGGAGACGAGGGGGCAGGAGCCTTCTTCACAAAGGAGAATGACTTTCAATGACTTTCTAGGCTaGCTCAGAACACCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SEEETRGQEPSSQRRMTFNDFLG*LRTPSP
Trigger: AGGACTGGGTGTTCTGAGGCAGCCTAGAAAGTCATT...GAAAGTCATTCTCCTTTGTGAAGAAGGCTCCTGCCCCCTCGTCTCCTCCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp GGTGGAGGGAATGAGGACTGGACCAGTAAGGATCTGGAGGTCATAACCCTTAGCGCAGGGTTTTCATTCTaGTGTGCCATCACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GGGNEDWTSKDLEVITLSAGFSF*CAITAK
Trigger: CTTTGCTGTGATGGCACACCAGAATGAAAACCCTGC...GCTAAGGGTTATGACCTCCAGATCCTTACTGGTCCAGTCCTCATTCCCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TTTAGGACAATAATAGGAATAAAGCAAGGCCCACAGGCTCCAGCTCCTGATGCCTTCTTCATGCGCCGGTaGCACATGCAGCCTATCAGA +
Preference number: 4 (lower is better)
Translates to: FRTIIGIKQGPQAPAPDAFFMRR*HMQPIR
Trigger: TCTGATAGGCTGCATGTGCCACCGGCGCATGAAGAA...GGCATCAGGAGCTGGAGCCTGTGGGCCTTGCTTTATTCCTATTATTGTCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp TTTAGGACAATAATAGGAATAAAGCAAGGCCCACAGGCTCCAGCTCCTGATGCCCGTAGACATCTGGACTaGTCTGTTGCACAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FRTIIGIKQGPQAPAPDARRHLD*SVAQVP
Trigger: AGGAACTTGTGCAACAGAGCAGTCCAGATGTCTACG...GGCATCAGGAGCTGGAGCCTGTGGGCCTTGCTTTATTCCTATTATTGTCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CCA 90 bp TTTAGGACAATAATAGGAATAAAGCAAGGCCCACAGGCTCCAGCTCCTGATGCCATGCTCGTAGACATCTaGACTGCTCTGTTGCACAAG +
Preference number: 4 (lower is better)
Translates to: FRTIIGIKQGPQAPAPDAMLVDI*TALLHK
Trigger: CTTGTGCAACAGAGCAGTCCAGATGTCTACGAGCAT...GGCATCAGGAGCTGGAGCCTGTGGGCCTTGCTTTATTCCTATTATTGTCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR GCA 90 bp GGTGGAGGGAATGAGGACTGGACCAGTAAGGATCTGGAGGTCATAACCCTTAGCAACCCTAATCTGGAATaGAATAGAGAATGGCTAACT +
Preference number: 4 (lower is better)
Translates to: GGGNEDWTSKDLEVITLSNPNLE*NREWLT
Trigger: AGTTAGCCATTCTCTATTGCATTCCAGATTAGGGTT...GCTAAGGGTTATGACCTCCAGATCCTTACTGGTCCAGTCCTCATTCCCTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 90 bp CCTCCCGCCCTCCAGCGCGACGCACACACTCTCCCACCAGGGTCCTaGGCGCCGCCCTCCAACTCCGAAGCGCGCGTCCACACCACGCGC +
Preference number: 5 (lower is better)
Translates to: PPALQRDAHTLPPGS*APPSNSEARVHTTR
Trigger: GCGCGTGGTGTGGACGCGCGCTTCGGAGTTGGAGGGCGGCGCCCAGGACCCTGGTGGGAGAGTGTGTGCGTCGCGCTGGAGGGCGGGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274721.8
CDS GCA 90 bp CCCTGCGCGTGGGGCTCGGCGGCCTTCTCGAAGAAAGTGAGCAGCTaGCTGAGGCAGACGTGGCGCTGGCAGTGGGGCCCGGAGCACGCC +
Preference number: 5 (lower is better)
Translates to: PCAWGSAAFSKKVSS*LRQTWRWQWGPEHA
Trigger: GGCGTGCTCCGGGCCCCACTGCCAGCGCCACGTCTGCCTCAGGCAGCTGCTCACTTTCTTCGAGAAGGCCGCCGAGCCCCACGCGCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp CTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCGGCGGCAGCGCGCAGTaGGGGGCGATGGTGTTGCGC +
Preference number: 5 (lower is better)
Translates to: LTPCGLQVHLGVVEGKRAGGSAQ*GAMVLR
Trigger: GCGCAACACCATCGCCCCCAACTGCGCGCTGCCGCC...GGCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 90 bp CCCCGGTCGTTGGGGGCACATGGGCACAGTAGCAGGCCCTGCGCGTaGGGCTCGGCGGCCTTCTCGAAGAAAGTGAGCAGCTGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: PRSLGAHGHSSRPCA*GSAAFSKKVSSCLR
Trigger: CCTCAGGCAGCTGCTCACTTTCTTCGAGAAGGCCGCCGAGCCCCACGCGCAGGGCCTGCTACTGTGCCCATGTGCCCCCAACGACCGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAATTGGGGGCGATGGTGTaGCGCCGGCGCTCCCCGCAG +
Preference number: 5 (lower is better)
Translates to: SFPHPLWAASPPGCGGGELGAMV*RRRSPQ
Trigger: CTGCGGGGAGCGCCGGCGCAACACCATCGCCCCCAA...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp CACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCGGCGGCAGCGCGCAGTaGGGGGCGATGGTGTTGCGC +
Preference number: 5 (lower is better)
Translates to: HLLPAAVLSSPLVGCKSTGGSAQ*GAMVLR
Trigger: GCGCAACACCATCGCCCCCAACTGCGCGCTGCCGCC...GGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp CTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCGCAGCCCCGGTCGTaGGGGGCACATGGGCACAGT +
Preference number: 5 (lower is better)
Translates to: LCPHLRTAPPSCCCPFLTPQPRS*GAHGHS
Trigger: ACTGTGCCCATGTGCCCCCAACGACCGGGGCTGCGG...GGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp TCCTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCATTGGGGGCGATGGTGTaGCGCCGGCGCTCCCCGCAG +
Preference number: 5 (lower is better)
Translates to: SCALICALHLLPAAVLSSLGAMV*RRRSPQ
Trigger: CTGCGGGGAGCGCCGGCGCAACACCATCGCCCCCAA...TGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGCACTCCTCCTGCAGGTaGCCACTGCCTCGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVHSSCR*PLPRQV
Trigger: CACCTGCCGAGGCAGTGGCAACCTGCAGGAGGAGTG...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp CTGTGCCCTCATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCACTCCTCCTGCAGGTaGCCACTGCCTCGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LCPHLRTAPPSCCCPFLTHSSCR*PLPRQV
Trigger: CACCTGCCGAGGCAGTGGCAACCTGCAGGAGGAGTG...GGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGATGAGGGCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS TCA 90 bp TGGGATCAGCCTGGCACTTCCTCCTGGCCTGGAGACAGCTGTTCATaGGTCGGCTTTCTGTGGGAAGGGGGTCTCCGGCTGCGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: WDQPGTSSWPGDSCS*VGFLWEGGLRLREA
Trigger: TGCCTCTCGCAGCCGGAGACCCCCTTCCCACAGAAAGCCGACTCATGAACAGCTGTCTCCAGGCCAGGAGGAAGTGCCAGGCTGATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS TCA 90 bp TTGCTGTGCTGCCTCCAGGCAGTCAGCAGGGACCGAAGGCTCCTCTaGGGGCAGTGGGGTGCTTATGCTAGAGGTGCAGGAATCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LLCCLQAVSRDRRLL*GQWGAYARGAGIQV
Trigger: CACCTGGATTCCTGCACCTCTAGCATAAGCACCCCACTGCCCTCAGAGGAGCCTTCGGTCCCTGCTGACTGCCTGGAGGCAGCACAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS GCA 90 bp ATGCGCCGGTGGCACATGCAGCCTATCAGAGAGCTGTTCCTGAGTTaGTGTGCTGCCTCCAGGCAGTCAGCAGGGACCGAAGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: MRRWHMQPIRELFLS*CAASRQSAGTEGSS
Trigger: AGAGGAGCCTTCGGTCCCTGCTGACTGCCTGGAGGCAGCACAGCAACTCAGGAACAGCTCTCTGATAGGCTGCATGTGCCACCGGCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS TCA 90 bp TCTTCATGCGCCGGTGGCACATGCAGCCTATCAGAGAGCTGTTCCTaGGTTGCTGTGCTGCCTCCAGGCAGTCAGCAGGGACCGAAGGCT +
Preference number: 5 (lower is better)
Translates to: SSCAGGTCSLSESCS*VAVLPPGSQQGPKA
Trigger: AGCCTTCGGTCCCTGCTGACTGCCTGGAGGCAGCACAGCAACTCAGGAACAGCTCTCTGATAGGCTGCATGTGCCACCGGCGCATGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp CCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGCACAGCATGGCAAACTaGAGGCAGAGGTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: PFLTPCGLQVHLGVVEGKHSMAN*RQRSES
Trigger: AGACTCAGACCTCTGCCTCAAGTTTGCCATGCTGTG...CTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274721.8
CDS-3UTR CAA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGCGCAGCCGGTCACACTaGTCATTGAGAGTACACAGC +
Preference number: 5 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVRSRSH*SLRVHS
Trigger: GCTGTGTACTCTCAATGACAAGTGTGACCGGCTGCG...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAACGCAGCCGGTCACACTaGTCATTGAGAGTACACAGC +
Preference number: 5 (lower is better)
Translates to: SFPHPLWAASPPGCGGGERSRSH*SLRVHS
Trigger: GCTGTGTACTCTCAATGACAAGTGTGACCGGCTGCG...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp CTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCATCTGGACTGCTCTGTaGCACAAGTTCCTAGGATGT +
Preference number: 5 (lower is better)
Translates to: LTPCGLQVHLGVVEGKRAIWTAL*HKFLGC
Trigger: ACATCCTAGGAACTTGTGCAACAGAGCAGTCCAGAT...GGCCCTCTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGATGACATGGCTAAATaGTGGCCACCAAGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: SFPHPLWAASPPGCGGGEDDMAK*WPPRRG
Trigger: GCCCCTCCTTGGTGGCCACAATTTAGCCATGTCATC...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp CTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGATGACATGGCTAAATaGTGGCCACCAAGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: LLSFPHPLWAASPPGCGGDDMAK*WPPRRG
Trigger: GCCCCTCCTTGGTGGCCACAATTTAGCCATGTCATC...TCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp CTCCAGCTCCTGATGCCCAGATGTTCGGCAGGATCCGGGGACAGGGCAGTGCAGAGGTCTGAGTCTGGTTaGAGCATGTTCAGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LQLLMPRCSAGSGDRAVQRSESG*SMFSLL
Trigger: CAGCAAACTGAACATGCTCAAACCAGACTCAGACCT...CTGCACTGCCCTGTCCCCGGATCCTGCCGAACATCTGGGCATCAGGAGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274721.8
CDS-3UTR CAA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGACATTGCTGACAAAGTaGGGGGTCATGGCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVTLLTK*GVMAVP
Trigger: TGGGACTGCCATGACCCCCAACTTTGTCAGCAATGT...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp CTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGCGGTCACACTTGTCATaGAGAGTACACAGCATGGCA +
Preference number: 5 (lower is better)
Translates to: LPAAVLSSPLVGCKSTWVRSHLS*RVHSMA
Trigger: TGCCATGCTGTGTACTCTCAATGACAAGTGTGACCG...CACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp CCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGATCTGGACTGCTCTGTaGCACAAGTTCCTAGGATGT +
Preference number: 5 (lower is better)
Translates to: PFLTPCGLQVHLGVVEGKIWTAL*HKFLGC
Trigger: ACATCCTAGGAACTTGTGCAACAGAGCAGTCCAGAT...CTTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGACATTGCTGACAAAGTaGGGGGTCATGGCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGTLLTK*GVMAVP
Trigger: TGGGACTGCCATGACCCCCAACTTTGTCAGCAATGT...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 90 bp TCTGTTGCACAAGTTCCTAGGATGTCCATGGGATGGCAGTGGGTCTaGAAATCCACCAGGCGTGATCTGCAAAGCGGGTCGGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SVAQVPRMSMGWQWV*KSTRRDLQSGSEKQ
Trigger: CTGCTTCTCCGACCCGCTTTGCAGATCACGCCTGGTGGATTTCCAGACCCACTGCCATCCCATGGACATCCTAGGAACTTGTGCAACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 90 bp CATCTGGACTGCTCTGTTGCACAAGTTCCTAGGATGTCCATGGGATaGCAGTGGGTCTGGAAATCCACCAGGCGTGATCTGCAAAGCGGG +
Preference number: 5 (lower is better)
Translates to: HLDCSVAQVPRMSMG*QWVWKSTRRDLQSG
Trigger: CCCGCTTTGCAGATCACGCCTGGTGGATTTCCAGACCCACTGCCATCCCATGGACATCCTAGGAACTTGTGCAACAGAGCAGTCCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 90 bp GGGTCATGGCAGTCCCAATCAGCCCCAGGTATGCTCGTAGACATCTaGACTGCTCTGTTGCACAAGTTCCTAGGATGTCCATGGGATGGC +
Preference number: 5 (lower is better)
Translates to: GSWQSQSAPGMLVDI*TALLHKFLGCPWDG
Trigger: GCCATCCCATGGACATCCTAGGAACTTGTGCAACAGAGCAGTCCAGATGTCTACGAGCATACCTGGGGCTGATTGGGACTGCCATGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp AGGGCAGTGCAGGCAGTAGTTTTCCATCCTCCACTCAGAGGAGGAGACGAGGGGCGGTCACACTTGTCATaGAGAGTACACAGCATGGCA +
Preference number: 5 (lower is better)
Translates to: RAVQAVVFHPPLRGGDEGRSHLS*RVHSMA
Trigger: TGCCATGCTGTGTACTCTCAATGACAAGTGTGACCG...CCCCTCGTCTCCTCCTCTGAGTGGAGGATGGAAAACTACTGCCTGCACTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS GCA 90 bp ATGGCAGTCCCAATCAGCCCCAGGTATGCTCGTAGACATCTGGACTaGTCTGTTGCACAAGTTCCTAGGATGTCCATGGGATGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: MAVPISPRYARRHLD*SVAQVPRMSMGWQW
Trigger: CCACTGCCATCCCATGGACATCCTAGGAACTTGTGCAACAGAGCAGTCCAGATGTCTACGAGCATACCTGGGGCTGATTGGGACTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 90 bp AATCAAGGGAAGCGTGCAGGAGAAAAGAGAGGGCACCCAGGGCTGTaGCCTCACAGCAGGGTTTTCATTCTGGTGTGCCATCACAGCAAA +
Preference number: 5 (lower is better)
Translates to: NQGKRAGEKRGHPGL*PHSRVFILVCHHSK
Trigger: TTTGCTGTGATGGCACACCAGAATGAAAACCCTGCTGTGAGGCCACAGCCCTGGGTGCCCTCTCTTTTCTCCTGCACGCTTCCCTTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp CACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTTCATTTTCCAGGGTTaGCTGGTCACTGTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: HLLPAAVLSSPLVGCKSTFIFQG*LVTVSS
Trigger: TGAAGACACAGTGACCAGCAAACCCTGGAAAATGAA...GGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274721.8
CDS-3UTR CAA 90 bp ATCTGCGCACTGCACCTCCTTCCTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCAAGGCAACACTGGTGTaGACATTGCTGACAAAGTTG +
Preference number: 5 (lower is better)
Translates to: ICALHLLPAAVLSSPLVGKATLV*TLLTKL
Trigger: CAACTTTGTCAGCAATGTCAACACCAGTGTTGCCTT...GCCCACAAGGGGTGAGGAAAGGACAGCAGCAGGAAGGAGGTGCAGTGCGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp TCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAAAGGCAACACTGGTGTaGACATTGCTGACAAAGTTG +
Preference number: 5 (lower is better)
Translates to: SFPHPLWAASPPGCGGGEKATLV*TLLTKL
Trigger: CAACTTTGTCAGCAATGTCAACACCAGTGTTGCCTT...TTCCCCTCCACCACACCCAGGTGGACTTGCAGCCCACAAGGGGTGAGGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS-3UTR CAA 90 bp TCAGAGGAGGAGACGAGGGGGCAGGAGCCTTCTTCACAAAGGAGAATGACTTTCCACAGCATGGCAAACTaGAGGCAGAGGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: SEEETRGQEPSSQRRMTFHSMAN*RQRSES
Trigger: TGACTCAGACCTCTGCCTCAAGTTTGCCATGCTGTG...GAAAGTCATTCTCCTTTGTGAAGAAGGCTCCTGCCCCCTCGTCTCCTCCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378362.3
CDS CCA 90 bp GTAGACATCTGGACTGCTCTGTTGCACAAGTTCCTAGGATGTCCATaGGATGGCAGTGGGTCTGGAAATCCACCAGGCGTGATCTGCAAA +
Preference number: 5 (lower is better)
Translates to: VDIWTALLHKFLGCP*DGSGSGNPPGVICK
Trigger: TTTGCAGATCACGCCTGGTGGATTTCCAGACCCACTGCCATCCCATGGACATCCTAGGAACTTGTGCAACAGAGCAGTCCAGATGTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 90 bp AGCAGGGTTTTCATTCTGGTGTGCCATCACAGCAAAGGTAGGGTGTaGCCAGTCCTGGGAGAAGAGTTGGCTGTGAAAACGCATCTTAGC +
Preference number: 5 (lower is better)
Translates to: SRVFILVCHHSKGRV*PVLGEELAVKTHLS
Trigger: GCTAAGATGCGTTTTCACAGCCAACTCTTCTCCCAGGACTGGCCACACCCTACCTTTGCTGTGATGGCACACCAGAATGAAAACCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 72 bp CTCCAGCGCGACGCACACACTCTCCCACCAGGGTCCTaGGCGCCGCCCTCCAACTCCGAAGCGCGCGTCCAC +
Preference number: 6 (lower is better)
Translates to: LQRDAHTLPPGS*APPSNSEARVH
Trigger: GTGGACGCGCGCTTCGGAGTTGGAGGGCGGCGCCCAGGACCCTGGTGGGAGAGTGTGTGCGTCGCGCTGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274721.8
CDS CCA 72 bp TTCTCGAAGAAAGTGAGCAGCTGCCTGAGGCAGACGTaGCGCTGGCAGTGGGGCCCGGAGCACGCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: FSKKVSSCLRQT*RWQWGPEHASP
Trigger: CGGGGAGGCGTGCTCCGGGCCCCACTGCCAGCGCCACGTCTGCCTCAGGCAGCTGCTCACTTTCTTCGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 72 bp TTGGGGGCACATGGGCACAGTAGCAGGCCCTGCGCGTaGGGCTCGGCGGCCTTCTCGAAGAAAGTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: LGAHGHSSRPCA*GSAAFSKKVSS
Trigger: GCTGCTCACTTTCTTCGAGAAGGCCGCCGAGCCCCACGCGCAGGGCCTGCTACTGTGCCCATGTGCCCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CAA 90 bp CATGCGCCGGTGGCACATGCAGCCTATCAGAGAGCTGTTCCTGAGTaGCTGTGCTGCCTCCAGGCAGTCAGCAGGGACCGAAGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: HAPVAHAAYQRAVPE*LCCLQAVSRDRRLL
Trigger: GAGGAGCCTTCGGTCCCTGCTGACTGCCTGGAGGCAGCACAGCAACTCAGGAACAGCTCTCTGATAGGCTGCATGTGCCACCGGCGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS TCA 72 bp TGCCTCCAGGCAGTCAGCAGGGACCGAAGGCTCCTCTaGGGGCAGTGGGGTGCTTATGCTAGAGGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: CLQAVSRDRRLL*GQWGAYARGAG
Trigger: TCCTGCACCTCTAGCATAAGCACCCCACTGCCCTCAGAGGAGCCTTCGGTCCCTGCTGACTGCCTGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS TCA 72 bp GCCGGTGGCACATGCAGCCTATCAGAGAGCTGTTCCTaGGTTGCTGTGCTGCCTCCAGGCAGTCAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: AGGTCSLSESCS*VAVLPPGSQQG
Trigger: TCCCTGCTGACTGCCTGGAGGCAGCACAGCAACTCAGGAACAGCTCTCTGATAGGCTGCATGTGCCACCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS GCA 72 bp CATGCAGCCTATCAGAGAGCTGTTCCTGAGTTGCTGTaGTGCCTCCAGGCAGTCAGCAGGGACCGAAGGCTC +
Preference number: 6 (lower is better)
Translates to: HAAYQRAVPELL*CLQAVSRDRRL
Trigger: GAGCCTTCGGTCCCTGCTGACTGCCTGGAGGCAGCACAGCAACTCAGGAACAGCTCTCTGATAGGCTGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 72 bp CTGCAGGTGGGATCAGCCTGGCACTTCCTCCTGGCCTaGAGACAGCTGTTCATGAGTCGGCTTTCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: LQVGSAWHFLLA*RQLFMSRLSVG
Trigger: TCCCACAGAAAGCCGACTCATGAACAGCTGTCTCCAGGCCAGGAGGAAGTGCCAGGCTGATCCCACCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS GCA 72 bp TGGCACATGCAGCCTATCAGAGAGCTGTTCCTGAGTTaGTGTGCTGCCTCCAGGCAGTCAGCAGGGACCGAA +
Preference number: 6 (lower is better)
Translates to: WHMQPIRELFLS*CAASRQSAGTE
Trigger: TTCGGTCCCTGCTGACTGCCTGGAGGCAGCACAGCAACTCAGGAACAGCTCTCTGATAGGCTGCATGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS GCA 72 bp CTTCCAGCATTTCACACTCCTCCTGCAGGTTGCCACTaGCTCGGCAGGTGCAGCTTAAGGCAACACTGGTGT +
Preference number: 6 (lower is better)
Translates to: LPAFHTPPAGCH*LGRCSLRQHWC
Trigger: ACACCAGTGTTGCCTTAAGCTGCACCTGCCGAGGCAGTGGCAACCTGCAGGAGGAGTGTGAAATGCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 72 bp CAAGTTCCTAGGATGTCCATGGGATGGCAGTGGGTCTaGAAATCCACCAGGCGTGATCTGCAAAGCGGGTCG +
Preference number: 6 (lower is better)
Translates to: QVPRMSMGWQWV*KSTRRDLQSGS
Trigger: CGACCCGCTTTGCAGATCACGCCTGGTGGATTTCCAGACCCACTGCCATCCCATGGACATCCTAGGAACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 72 bp AAGCGTGCAGGAGAAAAGAGAGGGCACCCAGGGCTGTaGCCTCACAGCAGGGTTTTCATTCTGGTGTGCCAT +
Preference number: 6 (lower is better)
Translates to: KRAGEKRGHPGL*PHSRVFILVCH
Trigger: ATGGCACACCAGAATGAAAACCCTGCTGTGAGGCCACAGCCCTGGGTGCCCTCTCTTTTCTCCTGCACGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CAA 90 bp AGGTTGCCACTGCCTCGGCAGGTGCAGCTTAAGGCAACACTGGTGTaGACATTGCTGACAAAGTTGGGGGTCATGGCAGTCCCAATCAGC +
Preference number: 6 (lower is better)
Translates to: RLPLPRQVQLKATLV*TLLTKLGVMAVPIS
Trigger: GCTGATTGGGACTGCCATGACCCCCAACTTTGTCAGCAATGTCAACACCAGTGTTGCCTTAAGCTGCACCTGCCGAGGCAGTGGCAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS GCA 72 bp CTGGGAGAAGAGTTGGCTGTGAAAACGCATCTTAGCTaGAATGGCCTCCGTGAGGCAGGGGTTGTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: LGEELAVKTHLS*NGLREAGVVGE
Trigger: TTCTCCCACAACCCCTGCCTCACGGAGGCCATTGCAGCTAAGATGCGTTTTCACAGCCAACTCTTCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 72 bp TGGACTGCTCTGTTGCACAAGTTCCTAGGATGTCCATaGGATGGCAGTGGGTCTGGAAATCCACCAGGCGTG +
Preference number: 6 (lower is better)
Translates to: WTALLHKFLGCP*DGSGSGNPPGV
Trigger: CACGCCTGGTGGATTTCCAGACCCACTGCCATCCCATGGACATCCTAGGAACTTGTGCAACAGAGCAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 72 bp ATCTTAGCTGCAATGGCCTCCGTGAGGCAGGGGTTGTaGGAGAAGAACCCTTCCAGCATTTCACACTCCTCC +
Preference number: 6 (lower is better)
Translates to: ILAAMASVRQGL*EKNPSSISHSS
Trigger: GGAGGAGTGTGAAATGCTGGAAGGGTTCTTCTCCCACAACCCCTGCCTCACGGAGGCCATTGCAGCTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CAA 72 bp CTGCCTCGGCAGGTGCAGCTTAAGGCAACACTGGTGTaGACATTGCTGACAAAGTTGGGGGTCATGGCAGTC +
Preference number: 6 (lower is better)
Translates to: LPRQVQLKATLV*TLLTKLGVMAV
Trigger: GACTGCCATGACCCCCAACTTTGTCAGCAATGTCAACACCAGTGTTGCCTTAAGCTGCACCTGCCGAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CAA 90 bp TCCCAATCAGCCCCAGGTATGCTCGTAGACATCTGGACTGCTCTGTaGCACAAGTTCCTAGGATGTCCATGGGATGGCAGTGGGTCTGGA +
Preference number: 6 (lower is better)
Translates to: SQSAPGMLVDIWTAL*HKFLGCPWDGSGSG
Trigger: TCCAGACCCACTGCCATCCCATGGACATCCTAGGAACTTGTGCAACAGAGCAGTCCAGATGTCTACGAGCATACCTGGGGCTGATTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS GCA 72 bp TCCAATAGATGTCCAAGCAGGCAACCTGGTTCTTCATaGGCCGGTGGCACATGCAGCCTATCAGAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: SNRCPSRQPGSS*AGGTCSLSESC
Trigger: ACAGCTCTCTGATAGGCTGCATGTGCCACCGGCGCATGAAGAACCAGGTTGCCTGCTTGGACATCTATTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 72 bp TGCTCTGTTGCACAAGTTCCTAGGATGTCCATGGGATaGCAGTGGGTCTGGAAATCCACCAGGCGTGATCTG +
Preference number: 6 (lower is better)
Translates to: CSVAQVPRMSMG*QWVWKSTRRDL
Trigger: CAGATCACGCCTGGTGGATTTCCAGACCCACTGCCATCCCATGGACATCCTAGGAACTTGTGCAACAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CAA 72 bp GCCCCAGGTATGCTCGTAGACATCTGGACTGCTCTGTaGCACAAGTTCCTAGGATGTCCATGGGATGGCAGT +
Preference number: 6 (lower is better)
Translates to: APGMLVDIWTAL*HKFLGCPWDGS
Trigger: ACTGCCATCCCATGGACATCCTAGGAACTTGTGCAACAGAGCAGTCCAGATGTCTACGAGCATACCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS GCA 72 bp CCAATCAGCCCCAGGTATGCTCGTAGACATCTGGACTaGTCTGTTGCACAAGTTCCTAGGATGTCCATGGGA +
Preference number: 6 (lower is better)
Translates to: PISPRYARRHLD*SVAQVPRMSMG
Trigger: TCCCATGGACATCCTAGGAACTTGTGCAACAGAGCAGTCCAGATGTCTACGAGCATACCTGGGGCTGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 72 bp CAGTCCCAATCAGCCCCAGGTATGCTCGTAGACATCTaGACTGCTCTGTTGCACAAGTTCCTAGGATGTCCA +
Preference number: 6 (lower is better)
Translates to: QSQSAPGMLVDI*TALLHKFLGCP
Trigger: TGGACATCCTAGGAACTTGTGCAACAGAGCAGTCCAGATGTCTACGAGCATACCTGGGGCTGATTGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CCA 72 bp TTCATTCTGGTGTGCCATCACAGCAAAGGTAGGGTGTaGCCAGTCCTGGGAGAAGAGTTGGCTGTGAAAACG +
Preference number: 6 (lower is better)
Translates to: FILVCHHSKGRV*PVLGEELAVKT
Trigger: CGTTTTCACAGCCAACTCTTCTCCCAGGACTGGCCACACCCTACCTTTGCTGTGATGGCACACCAGAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CAA 72 bp CTTAAGGCAACACTGGTGTTGACATTGCTGACAAAGTaGGGGGTCATGGCAGTCCCAATCAGCCCCAGGTAT +
Preference number: 6 (lower is better)
Translates to: LKATLVLTLLTK*GVMAVPISPRY
Trigger: ATACCTGGGGCTGATTGGGACTGCCATGACCCCCAACTTTGTCAGCAATGTCAACACCAGTGTTGCCTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274721.8
ENST00000378362.3
CDS CAA 72 bp AGGCAGAGGTCTGAGTCTGGTTTGAGCATGTTCAGTTaGCTGAGATTCATTTTCCAGGGTTTGCTGGTCACT +
Preference number: 6 (lower is better)
Translates to: RQRSESGLSMFS*LRFIFQGLLVT
Trigger: AGTGACCAGCAAACCCTGGAAAATGAATCTCAGCAAACTGAACATGCTCAAACCAGACTCAGACCTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274721.8