RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GFRA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000151892

Ensembl transcript IDs: ENST00000355422.11, ENST00000369234.5, ENST00000369236.5, ENST00000439649.7, ENST00000439649.8, ENST00000490345.2, ENST00000682194.1, ENST00000682489.1, ENST00000682724.1, ENST00000682743.1, ENST00000683474.1, ENST00000683792.1, ENST00000684105.1

Found 1068 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCCGGTACCTGACAGCTGTGACTTCCCCGCCGCTGTGCCTACCTaGCCAAGCTCATGGCCCTCTGAGGCCCAGAGGAGTGGCTGCCCA +
Preference number: 1 (lower is better)
Translates to: WPVPDSCDFPAAVPT*PSSWPSEAQRSGCP
Trigger: TGGGCAGCCACTCCTCTGGGCCTCAGAGGGCCATGAGCTTGGCCAGGTAGGCACAGCGGCGGGGAAGTCACAGCTGTCAGGTACCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp GACAGCTGTGACTTCCCCGCCGCTGTGCCTACCTGGCCAAGCTCATaGCCCTCTGAGGCCCAGAGGAGTGGCTGCCCAAGTGCTCAGAGG +
Preference number: 1 (lower is better)
Translates to: DSCDFPAAVPTWPSS*PSEAQRSGCPSAQR
Trigger: CCTCTGAGCACTTGGGCAGCCACTCCTCTGGGCCTCAGAGGGCCATGAGCTTGGCCAGGTAGGCACAGCGGCGGGGAAGTCACAGCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp CCTCAGCTAAAGCAGCTCTGGCATCTCCTATTCCCACCTGCACCATaGCCGGTACCTGACAGCTGTGACTTCCCCGCCGCTGTGCCTACC +
Preference number: 1 (lower is better)
Translates to: PQLKQLWHLLFPPAP*PVPDSCDFPAAVPT
Trigger: GGTAGGCACAGCGGCGGGGAAGTCACAGCTGTCAGGTACCGGCCATGGTGCAGGTGGGAATAGGAGATGCCAGAGCTGCTTTAGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp ATATTGGCACCTGCCAGAGGCAGACAGCCGAAGTCGCAGCTGCGCTaGTCAAATGAGCTTGGAGACCTTAGGGGGCTGAGACCTCAACGA +
Preference number: 1 (lower is better)
Translates to: ILAPARGRQPKSQLR*SNELGDLRGLRPQR
Trigger: TCGTTGAGGTCTCAGCCCCCTAAGGTCTCCAAGCTCATTTGACCAGCGCAGCTGCGACTTCGGCTGTCTGCCTCTGGCAGGTGCCAATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTaGCAGCGAACTGAGAAGGTCCAGGGTACCTTCACCTGCACTGCC +
Preference number: 1 (lower is better)
Translates to: VCVTERTTLYWRSLM*QRTEKVQGTFTCTA
Trigger: GGCAGTGCAGGTGAAGGTACCCTGGACCTTCTCAGTTCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 90 bp CTAGAAGCGGCCCATCCTCAGAGTGTATGCAAGACAGGAAGTGTCTaGATATGGACCAAATCAAAGGCTGAGGCAGCTCTGGGGGAGCCC +
Preference number: 1 (lower is better)
Translates to: LEAAHPQSVCKTGSV*IWTKSKAEAALGEP
Trigger: GGGCTCCCCCAGAGCTGCCTCAGCCTTTGATTTGGTCCATATTCAGACACTTCCTGTCTTGCATACACTCTGAGGATGGGCCGCTTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 90 bp GGGCTGGGTCTCAGAACAATCAGAAGTGCAGGTGGCACATTCTGCTaGAAACCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCAT +
Preference number: 1 (lower is better)
Translates to: GLGLRTIRSAGGTFC*KPPLHCLWEGGEAH
Trigger: ATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGGTTTTCAGCAGAATGTGCCACCTGCACTTCTGATTGTTCTGAGACCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 90 bp CACTGCCACAGTCACCCGGTCTCGCCCCAGGTAATCAACCTTTACTaGTTTTCAACGGCCCTGGTTCCCTATACTCAGGACATCCACTGG +
Preference number: 1 (lower is better)
Translates to: HCHSHPVSPQVINLY*FSTALVPYTQDIHW
Trigger: CCAGTGGATGTCCTGAGTATAGGGAACCAGGGCCGTTGAAAATCAGTAAAGGTTGATTACCTGGGGCGAGACCGGGTGACTGTGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp GATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGGGCCTTCTaGTGTCACTGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTT +
Preference number: 1 (lower is better)
Translates to: DFALSRQLSKLRWAF*CHCAQASGNSLLPV
Trigger: AACAGGCAGGAGAGAATTACCACTGGCCTGGGCACAGTGACAGCAGAAGGCCCACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp CCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTATTaGAATAGGGTTTGTGCGCCTTCTCCACCCCTCTGGGCTGGGTCT +
Preference number: 1 (lower is better)
Translates to: PQRLLAGCGSLQAVY*NRVCAPSPPLWAGS
Trigger: AGACCCAGCCCAGAGGGGTGGAGAAGGCGCACAAACCCTATTCCAATAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp TTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTaGGCCTTCTGCTGTCACTGTGCCCAGGCCAGTGGTAATTCTCTC +
Preference number: 1 (lower is better)
Translates to: LHLDFALSRQLSKLR*AFCCHCAQASGNSL
Trigger: GAGAGAATTACCACTGGCCTGGGCACAGTGACAGCAGAAGGCCCACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp CAGGCAGTTTATTGGAATAGGGTTTGTGCGCCTTCTCCACCCCTCTaGGCTGGGTCTCAGAACAATCAGAAGTGCAGGTGGCACATTCTG +
Preference number: 1 (lower is better)
Translates to: QAVYWNRVCAPSPPL*AGSQNNQKCRWHIL
Trigger: CAGAATGTGCCACCTGCACTTCTGATTGTTCTGAGACCCAGCCCAGAGGGGTGGAGAAGGCGCACAAACCCTATTCCAATAAACTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp GGCAGCCATGTGGGAGTGACCCCAGGAGAATGCTCCGGTGTCCTCTaGAAAGCAGATACACAGGACGATGGACAAATGTGTCATCTTCTA +
Preference number: 1 (lower is better)
Translates to: GSHVGVTPGECSGVL*KADTQDDGQMCHLL
Trigger: TAGAAGATGACACATTTGTCCATCGTCCTGTGTATCTGCTTTCCAGAGGACACCGGAGCATTCTCCTGGGGTCACTCCCACATGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 90 bp GCCACCAGTTCCCTCCACAGGTATGCACGCTTGCACTTCGAGCAATaGCAAAAGACAATGCTTGTCTGTTCTGTTTCCTCCTGCCTGTCC +
Preference number: 1 (lower is better)
Translates to: ATSSLHRYARLHFEQ*QKTMLVCSVSSCLS
Trigger: GGACAGGCAGGAGGAAACAGAACAGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGAGGGAACTGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 90 bp CTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGTTGCACCTTaGTTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGGGCCTT +
Preference number: 1 (lower is better)
Translates to: LSDPFTLGTWPTVAP*FCLISPTLQAQVGL
Trigger: AAGGCCCACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGCAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGC +
Preference number: 1 (lower is better)
Translates to: VCVCVCVCVCVCVCV*QREPRFIGGALCAS
Trigger: GCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACACACACACACACACACACACACACACACACACACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 90 bp ATAAAGGCTGTTGCAAAACAGCTATGTGAGGCAGCCATGTGGGAGTaGCCCCAGGAGAATGCTCCGGTGTCCTCTGGAAAGCAGATACAC +
Preference number: 1 (lower is better)
Translates to: IKAVAKQLCEAAMWE*PQENAPVSSGKQIH
Trigger: GTGTATCTGCTTTCCAGAGGACACCGGAGCATTCTCCTGGGGTCACTCCCACATGGCTGCCTCACATAGCTGTTTTGCAACAGCCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp CAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGTTaGACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGT +
Preference number: 1 (lower is better)
Translates to: QRTLRSIHPWNMAHC*TLILPYLANSPSSG
Trigger: ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp TGGAAGGATTCTGCCAATCTGGAAGGGATGGGTGTTTCCCTAAGCTaGTGTCAGAGGGCCCTGTGTTCTCAAGTTCAGCTCCAAATGCTG +
Preference number: 1 (lower is better)
Translates to: WKDSANLEGMGVSLS*CQRALCSQVQLQML
Trigger: CAGCATTTGGAGCTGAACTTGAGAACACAGGGCCCTCTGACAGCAGCTTAGGGAAACACCCATCCCTTCCAGATTGGCAGAATCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp CAGGAAGTGTCTGAATATGGACCAAATCAAAGGCTGAGGCAGCTCTaGGGGAGCCCTGTCCGGTGTTTGAGGAACTCGAAGACACAACTT +
Preference number: 1 (lower is better)
Translates to: QEVSEYGPNQRLRQL*GSPVRCLRNSKTQL
Trigger: AAGTTGTGTCTTCGAGTTCCTCAAACACCGGACAGGGCTCCCCCAGAGCTGCCTCAGCCTTTGATTTGGTCCATATTCAGACACTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp TCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTaGAGGCTTCTCAACAAAGCTCAGTCGACCCCTCACCCCTGTTCC +
Preference number: 1 (lower is better)
Translates to: SVNTQYNMETRPKPN*RLLNKAQSTPHPCS
Trigger: GGAACAGGGGTGAGGGGTCGACTGAGCTTTGTTGAGAAGCCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp TCTCGCCTCTCAGCAGGAAATGCCACGGGCAGATTTAAAGTCACTTaGATCCCAGTGCTTTTTCAGACCCTTTCTCCTAGGTCACCCTCA +
Preference number: 1 (lower is better)
Translates to: SRLSAGNATGRFKVT*IPVLFQTLSPRSPS
Trigger: TGAGGGTGACCTAGGAGAAAGGGTCTGAAAAAGCACTGGGATCCAAGTGACTTTAAATCTGCCCGTGGCATTTCCTGCTGAGAGGCGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 90 bp ACAATGCTTGTCTGTTCTGTTTCCTCCTGCCTGTCCACAGTCACATaGTGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGC +
Preference number: 1 (lower is better)
Translates to: TMLVCSVSSCLSTVT*CRTFCYSTRLLRVC
Trigger: GCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAAACAGAACAGACAAGCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp CTGATCAGTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTaGAACATGGCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCC +
Preference number: 1 (lower is better)
Translates to: LISKEHQRTLRSIHP*NMAHCCTLILPYLA
Trigger: GGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTACTGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp GCTGCTGTCAGAGGGCCCTGTGTTCTCAAGTTCAGCTCCAAATGCTaGTTTATTCCGTCAGAGTACTCACTCAGTAAACGTGCTGACTTG +
Preference number: 1 (lower is better)
Translates to: AAVRGPCVLKFSSKC*FIPSEYSLSKRADL
Trigger: CAAGTCAGCACGTTTACTGAGTGAGTACTCTGACGGAATAAACCAGCATTTGGAGCTGAACTTGAGAACACAGGGCCCTCTGACAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp TGCCTTCTCTATCATGGAAGAGCTGGATTTGCCATTGTTTGCACGTaGCCCAGGACTTACCCCTGGGAGACTGAGTCTCAGTTTCATGAA +
Preference number: 1 (lower is better)
Translates to: CLLYHGRAGFAIVCT*PRTYPWETESQFHE
Trigger: TTCATGAAACTGAGACTCAGTCTCCCAGGGGTAAGTCCTGGGCCACGTGCAAACAATGGCAAATCCAGCTCTTCCATGATAGAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp GCAAAGCCAGATGCCTTATCACCAGGGTCCTGTTCTGCTGATCTGTaGCAAGCAACTCATCTCACCAAACCTAATGTCAACCCTCTTGAT +
Preference number: 1 (lower is better)
Translates to: AKPDALSPGSCSADL*QATHLTKPNVNPLD
Trigger: ATCAAGAGGGTTGACATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGGTGATAAGGCATCTGGCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp TCTTACAAGGCAAACACCAGCAGGCAAAGGGGATCTGTAGAAATGTaGACCCTGGTTTCCTCCTCCATCTCTTCTACCAATGTGGGAAGA +
Preference number: 1 (lower is better)
Translates to: SYKANTSRQRGSVEM*TLVSSSISSTNVGR
Trigger: TCTTCCCACATTGGTAGAAGAGATGGAGGAGGAAACCAGGGTGCACATTTCTACAGATCCCCTTTGCCTGCTGGTGTTTGCCTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp CAGCAGGAAATGCCACGGGCAGATTTAAAGTCACTTGGATCCCAGTaGTTTTTCAGACCCTTTCTCCTAGGTCACCCTCAAAAACCTCAG +
Preference number: 1 (lower is better)
Translates to: QQEMPRADLKSLGSQ*FFRPFLLGHPQKPQ
Trigger: CTGAGGTTTTTGAGGGTGACCTAGGAGAAAGGGTCTGAAAAAGCACTGGGATCCAAGTGACTTTAAATCTGCCCGTGGCATTTCCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp TGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTaGTTCTGCGATTTCCATTCTCCTCTCCACATCCGAGAAATGCCT +
Preference number: 1 (lower is better)
Translates to: CPMTDHSQIWQGKLI*FCDFHSPLHIREMP
Trigger: AGGCATTTCTCGGATGTGGAGAGGAGAATGGAAATCGCAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp AGGAGAATGCTCCGGTGTCCTCTGGAAAGCAGATACACAGGACGATaGACAAATGTGTCATCTTCTACCAGTGGGAAGCTCAGTAAACAC +
Preference number: 1 (lower is better)
Translates to: RRMLRCPLESRYTGR*TNVSSSTSGKLSKH
Trigger: GTGTTTACTGAGCTTCCCACTGGTAGAAGATGACACATTTGTCCATCGTCCTGTGTATCTGCTTTCCAGAGGACACCGGAGCATTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 90 bp CCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTaGTCAGTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTT +
Preference number: 1 (lower is better)
Translates to: PDSRNSGCFVRRSLF*SVRNISGLSDPFTL
Trigger: AAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTACTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATaGTTGTCTGTTCTGTTTCCTCCTGCCTGTCCACAGTCACATGAT +
Preference number: 1 (lower is better)
Translates to: STGMHACTSSNDKRQ*LSVLFPPACPQSHD
Trigger: ATCATGTGACTGTGGACAGGCAGGAGGAAACAGAACAGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp AACCAAGGTACTGGATTGTGTCATGACAAGTGTGTCAAGAGATGCTaGAGAACATTTACAAGCAGCCACCAGTTCCCTCCACAGGTATGC +
Preference number: 1 (lower is better)
Translates to: NQGTGLCHDKCVKRC*RTFTSSHQFPPQVC
Trigger: GCATACCTGTGGAGGGAACTGGTGGCTGCTTGTAAATGTTCTGCAGCATCTCTTGACACACTTGTCATGACACAATCCAGTACCTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp ATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTaGGATTTCCATTCTCCTCTCCACATCCGAGAAATGCCTTCAGCT +
Preference number: 1 (lower is better)
Translates to: MTDHSQIWQGKLIWF*DFHSPLHIREMPSA
Trigger: AGCTGAAGGCATTTCTCGGATGTGGAGAGGAGAATGGAAATCGCAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 90 bp CTCACTCAGGTAAGGCTTAGGATTAGGAGAGTGTCGTTCAGGGATTaGGGTATTGAATCGGCACACTCATTCCCCACTCTCTATTTTGAC +
Preference number: 1 (lower is better)
Translates to: LTQVRLRIRRVSFRD*GIESAHSFPTLYFD
Trigger: GTCAAAATAGAGAGTGGGGAATGAGTGTGCCGATTCAATACCTCAATCCCTGAACGACACTCTCCTAATCCTAAGCCTTACCTGAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp TGGTTTCCTCCTCCATCTCTTCTACCAATGTGGGAAGAAAGCCAATaGTTCCCAGCACTTTCTGAAGGTGGAATCTCCTCCTCTTTACTT +
Preference number: 1 (lower is better)
Translates to: WFPPPSLLPMWEESQ*FPALSEGGISSSLL
Trigger: AAGTAAAGAGGAGGAGATTCCACCTTCAGAAAGTGCTGGGAAGCATTGGCTTTCTTCCCACATTGGTAGAAGAGATGGAGGAGGAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp TTACATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTaGCTCTCCCACTCTCCTAGTATAGCAGATGGAGTGCTTGGGAGT +
Preference number: 1 (lower is better)
Translates to: LHLFSQALYMDSKML*LSHSPSIADGVLGS
Trigger: ACTCCCAAGCACTCCATCTGCTATACTAGGAGAGTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp AACATTTACAAGCAGCCACCAGTTCCCTCCACAGGTATGCACGCTTaGACTTCGAGCAATGACAAAAGACAATGCTTGTCTGTTCTGTTT +
Preference number: 1 (lower is better)
Translates to: NIYKQPPVPSTGMHA*TSSNDKRQCLSVLF
Trigger: AAACAGAACAGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGAGGGAACTGGTGGCTGCTTGTAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp CTGATGTGCTTTATCAAAGAACAGAGGCAAGAGCAAGACAGATCATaGGGGTATGAATCCAGGAGGTCATCAACAGCCTCGAAAGAGAAT +
Preference number: 1 (lower is better)
Translates to: LMCFIKEQRQEQDRS*GYESRRSSTASKEN
Trigger: ATTCTCTTTCGAGGCTGTTGATGACCTCCTGGATTCATACCCCCATGATCTGTCTTGCTCTTGCCTCTGTTCTTTGATAAAGCACATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp AGAAAAGCACATCAGAAATGCCCAATGACAGACCACAGCCAAATATaGCAGGGCAAACTGATTTGGTTCTGCGATTTCCATTCTCCTCTC +
Preference number: 1 (lower is better)
Translates to: RKAHQKCPMTDHSQI*QGKLIWFCDFHSPL
Trigger: GAGAGGAGAATGGAAATCGCAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCATTTCTGATGTGCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 90 bp CTTTATCAAAGAACAGAGGCAAGAGCAAGACAGATCATGGGGGTATaGATCCAGGAGGTCATCAACAGCCTCGAAAGAGAATTAGAACAC +
Preference number: 1 (lower is better)
Translates to: LYQRTEARARQIMGV*IQEVINSLERELEH
Trigger: GTGTTCTAATTCTCTTTCGAGGCTGTTGATGACCTCCTGGATTCATACCCCCATGATCTGTCTTGCTCTTGCCTCTGTTCTTTGATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp GCTTTTAGGTCGTTCTTGAAAAGATGGGTGTCACATAGTCTGATGTaGTTTATCAAAGAACAGAGGCAAGAGCAAGACAGATCATGGGGG +
Preference number: 1 (lower is better)
Translates to: AFRSFLKRWVSHSLM*FIKEQRQEQDRSWG
Trigger: CCCCCATGATCTGTCTTGCTCTTGCCTCTGTTCTTTGATAAAGCACATCAGACTATGTGACACCCATCTTTTCAAGAACGACCTAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp TCGGATATTATCAATAGCTCTGGCTTCCTGTCTCTAAAGAACTTCTaGCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGT +
Preference number: 1 (lower is better)
Translates to: SDIINSSGFLSLKNF*LIQGTLAVSLEGPC
Trigger: ACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCAGAAGTTCTTTAGAGACAGGAAGCCAGAGCTATTGATAATATCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp TCTGAAGGTGGAATCTCCTCCTCTTTACTTAATGTTGGAGAAAAGTaGCCACCAGTACTCGATCATTGTAGATTCGGAATCTCGCCATCT +
Preference number: 1 (lower is better)
Translates to: SEGGISSSLLNVGEK*PPVLDHCRFGISPS
Trigger: AGATGGCGAGATTCCGAATCTACAATGATCGAGTACTGGTGGCCACTTTTCTCCAACATTAAGTAAAGAGGAGGAGATTCCACCTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 90 bp CAATGCCAGGAATACGATGCCAATAGGCCAGTTCTTGCTACCGTATaGCAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAACCAG +
Preference number: 1 (lower is better)
Translates to: QCQEYDANRPVLATV*QNKALKCQGFSFNQ
Trigger: CTGGTTGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAACTGGCCTATTGGCATCGTATTCCTGGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 90 bp TCTAATTCTTCTTCCTACTTCACTCTAGTCTTAGGATCTGTGTTATaGTTGCAGGTGTCAGGGGTCAATGTGCACATTCGAAGTTTTGCT +
Preference number: 1 (lower is better)
Translates to: SNSSSYFTLVLGSVL*LQVSGVNVHIRSFA
Trigger: AGCAAAACTTCGAATGTGCACATTGACCCCTGACACCTGCAAGCATAACACAGATCCTAAGACTAGAGTGAAGTAGGAAGAAGAATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp TCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGTTCTTGAAAAGATaGGTGTCACATAGTCTGATGTGCTTTATCAAAGAACAGAGGCAA +
Preference number: 1 (lower is better)
Translates to: SLLPVVIAFRSFLKR*VSHSLMCFIKEQRQ
Trigger: TTGCCTCTGTTCTTTGATAAAGCACATCAGACTATGTGACACCCATCTTTTCAAGAACGACCTAAAAGCAATGACAACAGGCAGGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 90 bp AATGTTCCAGTTGAATGGAACTGTTTCTCAACTGAGCTCCTAAACTaGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTT +
Preference number: 1 (lower is better)
Translates to: NVPVEWNCFSTELLN*NFSYTREQETDNLV
Trigger: AACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGTTTAGGAGCTCAGTTGAGAAACAGTTCCATTCAACTGGAACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACCAGGGTACCTTCACCTaGACTGCCACAGTCACCCGG +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNQGTFT*TATVTR
Trigger: CCGGGTGACTGTGGCAGTGCAGGTGAAGGTACCCTG...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp CTACCCCCGTTTTGGGCTCTGTCCTTCCTGGCGGATGTGAGCCTGTaGGGAGAGATGCTAGTTTCTCGCCTCTCAGCAGGAAATGCCACG +
Preference number: 2 (lower is better)
Translates to: LPPFWALSFLADVSL*GEMLVSRLSAGNAT
Trigger: CGTGGCATTTCCTGCTGAGAGGCGAGAAACTAGCATCTCTCCCAACAGGCTCACATCCGCCAGGAAGGACAGAGCCCAAAACGGGGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGCCCAAATGCCCGGACTaGAGGACAGGAAGTAGCGAA +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEPKCPD*RTGSSE
Trigger: TTCGCTACTTCCTGTCCTTCAGTCCGGGCATTTGGG...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGAGGGTCCTGTTCTGCTaGTCTGTGCCAAGCAACTCA +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWERVLFC*SVPSNS
Trigger: TGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGTTCCCTCCACAGGTATaGACGCTTGCACTTCGAGCA +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEFPPQV*TLALRA
Trigger: TGCTCGAAGTGCAAGCGTGCATACCTGTGGAGGGAA...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTCTCAGGTGGGCCTTCTaGTGTCACTGTGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTLRWAF*CHCAQA
Trigger: GGCCTGGGCACAGTGACAGCAGAAGGCCCACCTGAG...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACCCTTCTCCACCCCTCTaGGCTGGGTCTCAGAACAAT +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNPSPPL*AGSQNN
Trigger: ATTGTTCTGAGACCCAGCCCAGAGGGGTGGAGAAGG...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACAGAAGTTGTCACCCCTaGGGTTTGTCTGGGATCGGG +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNRSCHP*GLSGIG
Trigger: CCCGATCCCAGACAAACCCCAGGGGTGACAACTTCT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp CTCAGCGGACTAACTGGCGAATTTCCCACAAAGTCTACCCCCGTTTaGGGCTCTGTCCTTCCTGGCGGATGTGAGCCTGTTGGGAGAGAT +
Preference number: 2 (lower is better)
Translates to: LSGLTGEFPTKSTPV*GSVLPGGCEPVGRD
Trigger: ATCTCTCCCAACAGGCTCACATCCGCCAGGAAGGACAGAGCCCAAAACGGGGGTAGACTTTGTGGGAAATTCGCCAGTTAGTCCGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGTATCCCAAAGCCTTCTaGGTTTGGATGGAGCACTGC +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEYPKAF*VWMEHC
Trigger: GCAGTGCTCCATCCAAACTCAGAAGGCTTTGGGATA...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGTGTCGTTCAGGGATTaGGGTATTGAATCGGCACAC +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEVSFRD*GIESAH
Trigger: GTGTGCCGATTCAATACCTCAATCCCTGAACGACAC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGAAAGAAAGGAGAACCTaGCCATGCCTCCATGTCCCA +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEKERRT*PCLHVP
Trigger: TGGGACATGGAGGCATGGGCAGGTTCTCCTTTCTTT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACGCTGGGCTTGGCAGCTaGCCTGGAGCAAAAATTAAC +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNAGLGS*PGAKIN
Trigger: GTTAATTTTTGCTCCAGGGCAGCTGCCAAGCCCAGC...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACCCCAGGACTTACCCCTaGGAGACTGAGTCTCAGTTT +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNPRTYP*ETESQF
Trigger: AAACTGAGACTCAGTCTCCCAGGGGTAAGTCCTGGG...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGCCATTGTTTGCACGTaGCCCAGGACTTACCCCTGG +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRAIVCT*PRTYPW
Trigger: CCAGGGGTAAGTCCTGGGCCACGTGCAAACAATGGC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGAGCGAACACTACTTATaGGGGGAAAGAAGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWESEHYL*GERSSV
Trigger: CACAGAGCTTCTTTCCCCTCATAAGTAGTGTTCGCT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACCAGATCATGGGGGTATaGATCCAGGAGGTCATCAAC +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNQIMGV*IQEVIN
Trigger: GTTGATGACCTCCTGGATTCATACCCCCATGATCTG...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGTGGTGGAGGGAGGCCTaGATAATAACGATGAAAGAG +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEWWREA*IITMKE
Trigger: CTCTTTCATCGTTATTATTCAGGCCTCCCTCCACCA...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACGTGTGTGTGTGTGTGTaGCAGAGAGAACCACGCTTT +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNVCVCV*QREPRF
Trigger: AAAGCGTGGTTCTCTCTGTCACACACACACACACAC...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGACCTTCAGACCAAACTaGTCCAAACAGTGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWETFRPN*SKQWPR
Trigger: TCTTGGCCACTGTTTGGAGCAGTTTGGTCTGAAGGT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGTCTTCTAACATGGTCTaGAGTCTGTCACGGAGGACA +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWESSNMV*SLSRRT
Trigger: TGTCCTCCGTGACAGACTGCAGACCATGTTAGAAGA...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGCTGATATTGGCACCTaGCAGAGGCAGACAGCCGAA +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRADIGT*QRQTAE
Trigger: TTCGGCTGTCTGCCTCTGGCAGGTGCCAATATCAGC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGACTCCAAAATGCTTTaGCTCTCCCACTCTCCTAGT +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEDSKML*LSHSPS
Trigger: ACTAGGAGAGTGGGAGAGCCAAAGCATTTTGGAGTC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACAGATCCATTCACCCTTaGAACATGGCCCACTGTTGC +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNRSIHP*NMAHCC
Trigger: GCAACAGTGGGCCATGTTCCAAGGGTGAATGGATCT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACAGCGAACACTACTTATaGGGGGAAAGAAGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNSEHYL*GERSSV
Trigger: CACAGAGCTTCTTTCCCCTCATAAGTAGTGTTCGCT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTACTTCCCAGCACTTTCTaGAGGTGGAATCTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: GAETSTTISRLWFSAGSLLPSTF*RWNLLL
Trigger: GAGGAGGAGATTCCACCTTCAGAAAGTGCTGGGAAG...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTCCCAAATGCCCGGACTaGAGGACAGGAAGTAGCGAA +
Preference number: 2 (lower is better)
Translates to: AHCCTLILPYLANSPSSGPKCPD*RTGSSE
Trigger: TTCGCTACTTCCTGTCCTTCAGTCCGGGCATTTGGG...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACAGAAGGTCCCTGTTCTaGTCAGTAAGGAACATCAGC +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNRRSLF*SVRNIS
Trigger: GCTGATGTTCCTTACTGATCAGAACAGGGACCTTCT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACTGGTGGAGGGAGGCCTaGATAATAACGATGAAAGAG +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNWWREA*IITMKE
Trigger: CTCTTTCATCGTTATTATTCAGGCCTCCCTCCACCA...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACCAGAACAATCAGAAGTaGAGGTGGCACATTCTGCTG +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNQNNQK*RWHILL
Trigger: CAGCAGAATGTGCCACCTGCACTTCTGATTGTTCTG...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGACTTCCCCGCCGCTGTaGCTACCTGGCCAAGCTCAT +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLTSPPL*LPGQAH
Trigger: ATGAGCTTGGCCAGGTAGGCACAGCGGCGGGGAAGT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGCAGGGTACCTTCACCTaGACTGCCACAGTCACCCGG +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLQGTFT*TATVTR
Trigger: CCGGGTGACTGTGGCAGTGCAGGTGAAGGTACCCTG...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGACTCTGGCCAGTCTCCTaGCGCCCTACAGAAGAAAAT +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRLWPVS*RPTEEN
Trigger: ATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAG...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp AGATCCATTCACCCTTGGAACATGGCCCACTGTTGCACCTTGATTTaGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGGGCCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: RSIHPWNMAHCCTLI*PYLANSPSSGGPSA
Trigger: AGCAGAAGGCCCACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTCCAAGGGTGAATGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp ACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGTTGCACCTaGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: TLRSIHPWNMAHCCT*ILPYLANSPSSGGP
Trigger: AGGCCCACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp TCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGTaGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: SADSQIHSPLEHGPL*HLDFALSRQLSKLR
Trigger: CCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTACAGGGATTGAGGTATTaGATCGGCACACTCATTCCC +
Preference number: 2 (lower is better)
Translates to: GAETSTTISRLWFSAGSLQGLRY*IGTLIP
Trigger: GGGAATGAGTGTGCCGATTCAATACCTCAATCCCTG...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGACCAAATCAAAGGCTaGGGCAGCTCTGGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCDQIKG*GSSGGA
Trigger: GGCTCCCCCAGAGCTGCCTCAGCCTTTGATTTGGTC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCCTTCCTGGCGGATGTaGGCCTGTTGGGAGAGATGC +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCPSWRM*ACWERC
Trigger: GCATCTCTCCCAACAGGCTCACATCCGCCAGGAAGG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGTTTGGATGGAGCACTaGATCAGGTTTTTCACAGAA +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEVWMEH*IRFFTE
Trigger: TTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAAC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAAAAGAAAGGAGAACCTaGCCATGCCTCCATGTCCCA +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRKERRT*PCLHVP
Trigger: TGGGACATGGAGGCATGGGCAGGTTCTCCTTTCTTT...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGAACATGGCCCACTGTTaGACCTTGATTTTGCCTTAT +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWENMAHC*TLILPY
Trigger: ATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGGATTTGCCATTGTTTaGACGTGGCCCAGGACTTAC +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRGFAIV*TWPRTY
Trigger: GTAAGTCCTGGGCCACGTGCAAACAATGGCAAATCC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAGCCCAGAGGAGTGGCTaGCCAAGTGCTCAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIAQRSG*PSAQRW
Trigger: CCACCTCTGAGCACTTGGGCAGCCACTCCTCTGGGC...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAAACTGCTCCAAACAGTaGCCAAGACGTTGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: GAETSTTISRLWFSAGSLNCSKQ*PRRCSQ
Trigger: CTGACTGCAACGTCTTGGCCACTGTTTGGAGCAGTT...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGATGGAAGATGATAAGTaGTTAGCAAAGCCAGATGCC +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEMEDDK*LAKPDA
Trigger: GGCATCTGGCTTTGCTAACCACTTATCATCTTCCAT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGAATGTTGGAGAAAAGTaGCCACCAGTACTCGATCAT +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWENVGEK*PPVLDH
Trigger: ATGATCGAGTACTGGTGGCCACTTTTCTCCAACATT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGATTACGATGAAGAATTaGGGAGGGCAATACTTAGGC +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEITMKN*GGQYLG
Trigger: GCCTAAGTATTGCCCTCCCCAATTCTTCATCGTAAT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGCTGGGATCGGGGGAGTaGTCTACCTTTCTTGTCAGC +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRLGSGE*STFLVS
Trigger: GCTGACAAGAAAGGTAGACCACTCCCCCGATCCCAG...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp CCAAATCAAAGGCTGAGGCAGCTCTGGGGGAGCCCTGTCCGGTGTTaGAGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGC +
Preference number: 2 (lower is better)
Translates to: PNQRLRQLWGSPVRC*RNSKTQLLRHSYYS
Trigger: GCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCTCAAACACCGGACAGGGCTCCCCCAGAGCTGCCTCAGCCTTTGATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGATGAGCTGTATTTGTaGAGTTCATATCAGAGCGAA +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEDELYL*SSYQSE
Trigger: TTCGCTCTGATATGAACTTCACAAATACAGCTCATC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTCTAACGTGTTGTCCCTaGACAAGATGCTTCCCCCTA +
Preference number: 2 (lower is better)
Translates to: AHCCTLILPYLANSPSSGLTCCP*TRCFPL
Trigger: TAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAG...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGCTAACGTGTTGTCCCTaGACAAGATGCTTCCCCCTA +
Preference number: 2 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSLTCCP*TRCFPL
Trigger: TAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAG...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGGCCCTGTCCGGTGTTTaGGGAACTCGAAGACACAAC +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLALSGV*GTRRHN
Trigger: GTTGTGTCTTCGAGTTCCTCAAACACCGGACAGGGC...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAGACCAAATCAAAGGCTaGGGCAGCTCTGGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIDQIKG*GSSGGA
Trigger: GGCTCCCCCAGAGCTGCCTCAGCCTTTGATTTGGTC...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTAAAGAAAGGAGAACCTaGCCATGCCTCCATGTCCCA +
Preference number: 2 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTKERRT*PCLHVP
Trigger: TGGGACATGGAGGCATGGGCAGGTTCTCCTTTCTTT...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTATCTTCTAACATGGTCTaGAGTCTGTCACGGAGGACA +
Preference number: 2 (lower is better)
Translates to: GAETSTTISRLWFSAGSLSSNMV*SLSRRT
Trigger: TGTCCTCCGTGACAGACTGCAGACCATGTTAGAAGA...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGTTAGCAAAGCCAGATaGCTTATCACCAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTVSKAR*LITRVL
Trigger: CAGGACCCTGGTGATAAGGCATCTGGCTTTGCTAAC...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGGATCTGTAGAAATGTaGACCCTGGTTTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: AHCCTLILPYLANSPSSGGSVEM*TLVSSS
Trigger: GGAGGAGGAAACCAGGGTGCACATTTCTACAGATCC...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGAGCCGAAGTCGCAGCTaGGCTGGTCAAATGAGCTTG +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLSRSRS*AGQMSL
Trigger: CAAGCTCATTTGACCAGCGCAGCTGCGACTTCGGCT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACCTTGTCAGCATCCTGTaGTTGAGGCAGATTAAAATC +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNLVSIL*LRQIKI
Trigger: GATTTTAATCTGCCTCAAGCACAGGATGCTGACAAG...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTAACTGCTCCAAACAGTaGCCAAGACGTTGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTNCSKQ*PRRCSQ
Trigger: CTGACTGCAACGTCTTGGCCACTGTTTGGAGCAGTT...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGAGTCACGGTCTGCATaGACCCTAGTTACTGTTTGG +
Preference number: 2 (lower is better)
Translates to: AHCCTLILPYLANSPSSGESRSA*TLVTVW
Trigger: CCAAACAGTAACTAGGGTCCATGCAGACCGTGACTC...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGCCTTCTCCACCCCTCTaGGCTGGGTCTCAGAACAAT +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLPSPPL*AGSQNN
Trigger: ATTGTTCTGAGACCCAGCCCAGAGGGGTGGAGAAGG...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACTCTGAGTACCTACTATaGGTCATGCTTTCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNSEYLL*VMLSAE
Trigger: TTCAGCAGAAAGCATGACCCATAGTAGGTACTCAGA...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTAGCGAACACTACTTATaGGGGGAAAGAAGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: AHCCTLILPYLANSPSSGSEHYL*GERSSV
Trigger: CACAGAGCTTCTTTCCCCTCATAAGTAGTGTTCGCT...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGCTTCCCAGCACTTTCTaGAGGTGGAATCTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQLPSTF*RWNLLL
Trigger: GAGGAGGAGATTCCACCTTCAGAAAGTGCTGGGAAG...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCCCAAATGCCCGGACTaGAGGACAGGAAGTAGCGAA +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCPKCPD*RTGSSE
Trigger: TTCGCTACTTCCTGTCCTTCAGTCCGGGCATTTGGG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACAAGACAGGAAGTGTCTaGATATGGACCAAATCAAAG +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNKTGSV*IWTKSK
Trigger: CTTTGATTTGGTCCATATTCAGACACTTCCTGTCTT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGGAGAAAACCTTCTATTaGTGCCGGTGCTGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLEKTFY*CRCWAW
Trigger: CCAAGCCCAGCACCGGCATCAATAGAAGGTTTTCTC...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGCTTTTAGGCTCAGGATaGAGGTGGGTGTGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRLLGSG*RWVCLP
Trigger: AGGCAAACACACCCACCTTCATCCTGAGCCTAAAAG...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAACAGGTATGCACGCTTaGACTTCGAGCAATGACAAA +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRTGMHA*TSSNDK
Trigger: TTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGT...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGAGGAGAACCTGCCCATaGCTCCATGTCCCAATCAAA +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRRRTCP*LHVPIK
Trigger: TTTGATTGGGACATGGAGGCATGGGCAGGTTCTCCT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTTCTTCTAACATGGTCTaGAGTCTGTCACGGAGGACA +
Preference number: 2 (lower is better)
Translates to: AHCCTLILPYLANSPSSGSSNMV*SLSRRT
Trigger: TGTCCTCCGTGACAGACTGCAGACCATGTTAGAAGA...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGTGTTCTGCTGATCTGTaGCAAGCAACTCATCTCACC +
Preference number: 2 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSCSADL*QATHLT
Trigger: GGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACA...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGGATCTGTAGAAATGTaGACCCTGGTTTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRGSVEM*TLVSSS
Trigger: GGAGGAGGAAACCAGGGTGCACATTTCTACAGATCC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGTCACATAGTCTGATGTaGTTTATCAAAGAACAGAGG +
Preference number: 2 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWESHSLM*FIKEQR
Trigger: CCTCTGTTCTTTGATAAAGCACATCAGACTATGTGA...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTGGAAGAGCTGGATTTaGCATTGTTTGCACGTGGCC +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRWKSWI*HCLHVA
Trigger: GGCCACGTGCAAACAATGGCAAATCCAGCTCTTCCA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAACTGCTCCAAACAGTaGCCAAGACGTTGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: SLKISGQSPGALQKKIGDNCSKQ*PRRCSQ
Trigger: CTGACTGCAACGTCTTGGCCACTGTTTGGAGCAGTT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTCCACCCCTCTGGGCTaGGTCTCAGAACAATCAGAA +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLSTPLG*VSEQSE
Trigger: TTCTGATTGTTCTGAGACCCAGCCCAGAGGGGTGGA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCCTTCTCCACCCCTCTaGGCTGGGTCTCAGAACAAT +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCPSPPL*AGSQNN
Trigger: ATTGTTCTGAGACCCAGCCCAGAGGGGTGGAGAAGG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTAAGTCGCAGCTGCGCTaGTCAAATGAGCTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: GAKINSPWQWDKMLILAPKSQLR*SNELGD
Trigger: GTCTCCAAGCTCATTTGACCAGCGCAGCTGCGACTT...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGAAGTCGCAGCTGCGCTaGTCAAATGAGCTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLKSQLR*SNELGD
Trigger: GTCTCCAAGCTCATTTGACCAGCGCAGCTGCGACTT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp TGGCACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: WHTRKLMLDHIALQS*CVCVCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACACACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTaGGTTCTGCGATTTCCATTCTCCTCTCCACATCCGAGAAATGCC +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTD*VLRFPFSSPHPRNA
Trigger: GGCATTTCTCGGATGTGGAGAGGAGAATGGAAATCGCAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGTATCCCAAAGCCTTCTaGGTTTGGATGGAGCACTGC +
Preference number: 2 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQYPKAF*VWMEHC
Trigger: GCAGTGCTCCATCCAAACTCAGAAGGCTTTGGGATA...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGTATCCCAAAGCCTTCTaGGTTTGGATGGAGCACTGC +
Preference number: 2 (lower is better)
Translates to: DAELSATARGFSESAFDEYPKAF*VWMEHC
Trigger: GCAGTGCTCCATCCAAACTCAGAAGGCTTTGGGATA...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATCTGTCACGGAGGACATaGAACAAGATGCAAGCAGAT +
Preference number: 2 (lower is better)
Translates to: PGSCSADLCQATHLTKPNLSRRT*NKMQAD
Trigger: ATCTGCTTGCATCTTGTTTCATGTCCTCCGTGACAG...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGCCATGCATTCTTCAATaGAGGCTGCCCTTGTTAGCG +
Preference number: 2 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQPCILQ*RLPLLA
Trigger: CGCTAACAAGGGCAGCCTTCATTGAAGAATGCATGG...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACCCATGCATTCTTCAATaGAGGCTGCCCTTGTTAGCG +
Preference number: 2 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHPCILQ*RLPLLA
Trigger: CGCTAACAAGGGCAGCCTTCATTGAAGAATGCATGG...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGCAGTTCTGGGGCAAATaGTGGTGTTTTAGGGTCACC +
Preference number: 2 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQQFWGK*WCFRVT
Trigger: GGTGACCCTAAAACACCATCATTTGCCCCAGAACTG...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGCAGATCATGGGGGTATaGATCCAGGAGGTCATCAAC +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLQIMGV*IQEVIN
Trigger: GTTGATGACCTCCTGGATTCATACCCCCATGATCTG...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAGAAGGTCCCTGTTCTaGTCAGTAAGGAACATCAGC +
Preference number: 2 (lower is better)
Translates to: SLKISGQSPGALQKKIGDRRSLF*SVRNIS
Trigger: GCTGATGTTCCTTACTGATCAGAACAGGGACCTTCT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGATTCCTGGCAAGGATaGGACCATCCCCAATCCCAA +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCDSWQG*DHPQSQ
Trigger: TTGGGATTGGGGATGGTCTCATCCTTGCCAGGAATC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTTATGTGCCAGCGAACTaGGAAGGTCCAGGGTACCTT +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCYVPAN*EGPGYL
Trigger: AAGGTACCCTGGACCTTCTCAGTTCGCTGGCACATA...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGATGTGTCAAGAGATGCTaGAGAACATTTACAAGCAGC +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRCVKRC*RTFTSS
Trigger: GCTGCTTGTAAATGTTCTGCAGCATCTCTTGACACA...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGATTAGGAAAAGAACTGTaGATCCCAGCATGGATGTGT +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRLGKEL*IPAWMC
Trigger: ACACATCCATGCTGGGATGCACAGTTCTTTTCCTAA...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGGTTAGCAAAGCCAGATaGCTTATCACCAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQVSKAR*LITRVL
Trigger: CAGGACCCTGGTGATAAGGCATCTGGCTTTGCTAAC...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGAATGGCGGAAACCTTaGTTGGCTTGCTTTGATAAG +
Preference number: 2 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTEWRKP*LACFDK
Trigger: CTTATCAAAGCAAGCCAAGCAAGGTTTCCGCCATTC...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACTCACATAGTCTGATGTaGTTTATCAAAGAACAGAGG +
Preference number: 2 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNSHSLM*FIKEQR
Trigger: CCTCTGTTCTTTGATAAAGCACATCAGACTATGTGA...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTTAGGATCTGTGTTATaGTTGCAGGTGTCAGGGGTC +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRLGSVL*LQVSGV
Trigger: GACCCCTGACACCTGCAAGCATAACACAGATCCTAA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATATGGCGGAGCCTTATGTaGCAGCGAACTGAGAAGGTC +
Preference number: 2 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIWRSLM*QRTEKV
Trigger: GACCTTCTCAGTTCGCTGGCACATAAGGCTCCGCCA...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGCCTTCTGAGTTTGGATaGAGCACTGCATCAGGTTTT +
Preference number: 2 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEPSEFG*STASGF
Trigger: AAAACCTGATGCAGTGCTCCATCCAAACTCAGAAGG...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAATGGAAGATGATAAGTaGTTAGCAAAGCCAGATGCC +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRMEDDK*LAKPDA
Trigger: GGCATCTGGCTTTGCTAACCACTTATCATCTTCCAT...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGGCGGAAACCTTGCTTaGCTTGCTTTGATAAGAATC +
Preference number: 2 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTGGNLA*LALIRI
Trigger: GATTCTTATCAAAGCAAGCCAAGCAAGGTTTCCGCC...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGGCGGAAACCTTGCTTaGCTTGCTTTGATAAGAATC +
Preference number: 2 (lower is better)
Translates to: AHCCTLILPYLANSPSSGGGNLA*LALIRI
Trigger: GATTCTTATCAAAGCAAGCCAAGCAAGGTTTCCGCC...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGAAATAAGTAGGGCATaGCTAGATGTAATCAGGGAG +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQREISRA*LDVIRE
Trigger: CTCCCTGATTACATCTAGCCATGCCCTACTTATTTC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGGAGCAAGACAGATCATaGGGGTATGAATCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQEQDRS*GYESRR
Trigger: CCTCCTGGATTCATACCCCCATGATCTGTCTTGCTC...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATACTCTCCAAGCTCAGGTaGGCCTTCTGCTGTCACTGT +
Preference number: 2 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHILSKLR*AFCCHC
Trigger: ACAGTGACAGCAGAAGGCCCACCTGAGCTTGGAGAG...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGAGGATTCTGCCAATCTaGAAGGGATGGGTGTTTCCC +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLRILPI*KGWVFP
Trigger: GGGAAACACCCATCCCTTCCAGATTGGCAGAATCCT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCCCAGGACTTACCCCTaGGAGACTGAGTCTCAGTTT +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCPRTYP*ETESQF
Trigger: AAACTGAGACTCAGTCTCCCAGGGGTAAGTCCTGGG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGAGAACCACGCTTTATTaGCGGAGCCTTATGTGCCAG +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLRTTLY*RSLMCQ
Trigger: CTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGACCACAGCCAAATATaGCAGGGCAAACTGATTTGG +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRDHSQI*QGKLIW
Trigger: CCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp AATGTGCACATTCGAAGTTTTGCTCCTTTGAGCACTGCTGACTGTTaGCTTTCCTCAGCTAAAGCAGCTCTGGCATCTCCTATTCCCACC +
Preference number: 2 (lower is better)
Translates to: NVHIRSFAPLSTADC*LSSAKAALASPIPT
Trigger: GGTGGGAATAGGAGATGCCAGAGCTGCTTTAGCTGAGGAAAGCAAACAGTCAGCAGTGCTCAAAGGAGCAAAACTTCGAATGTGCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGTGTCGTTCAGGGATTaGGGTATTGAATCGGCACAC +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCVSFRD*GIESAH
Trigger: GTGTGCCGATTCAATACCTCAATCCCTGAACGACAC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAAGGGTCCTGTTCTGCTaGTCTGTGCCAAGCAACTCA +
Preference number: 2 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIRVLFC*SVPSNS
Trigger: TGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCT...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCTAACGTGTTGTCCCTaGACAAGATGCTTCCCCCTA +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCLTCCP*TRCFPL
Trigger: TAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAAAGACAGGAAGTGTCTaGATATGGACCAAATCAAAG +
Preference number: 2 (lower is better)
Translates to: GAETSTTISRLWFSAGSLKTGSV*IWTKSK
Trigger: CTTTGATTTGGTCCATATTCAGACACTTCCTGTCTT...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGGGTGTCACATAGTCTaGTGTGCTTTATCAAAGAAC +
Preference number: 2 (lower is better)
Translates to: AHCCTLILPYLANSPSSGGCHIV*CALSKN
Trigger: GTTCTTTGATAAAGCACATCAGACTATGTGACACCC...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAGATTCCTGGCAAGGATaGGACCATCCCCAATCCCAA +
Preference number: 2 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIDSWQG*DHPQSQ
Trigger: TTGGGATTGGGGATGGTCTCATCCTTGCCAGGAATC...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCTTTTAGGCTCAGGATaGAGGTGGGTGTGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCLLGSG*RWVCLP
Trigger: AGGCAAACACACCCACCTTCATCCTGAGCCTAAAAG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGTTTGGATGGAGCACTaGATCAGGTTTTTCACAGAA +
Preference number: 2 (lower is better)
Translates to: AHCCTLILPYLANSPSSGVWMEH*IRFFTE
Trigger: TTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAAC...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGACAGGTATGCACGCTTaGACTTCGAGCAATGACAAA +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRTGMHA*TSSNDK
Trigger: TTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACTGTTCTGCTGATCTGTaGCAAGCAACTCATCTCACC +
Preference number: 2 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHCSADL*QATHLT
Trigger: GGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACA...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTACATGGACTCCAAAATaGTTTGGCTCTCCCACTCTC +
Preference number: 2 (lower is better)
Translates to: GAKINSPWQWDKMLILAPTWTPK*FGSPTL
Trigger: GAGAGTGGGAGAGCCAAAGCATTTTGGAGTCCATGT...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTCAGAACAATCAGAAGTaGAGGTGGCACATTCTGCTG +
Preference number: 2 (lower is better)
Translates to: GAKINSPWQWDKMLILAPQNNQK*RWHILL
Trigger: CAGCAGAATGTGCCACCTGCACTTCTGATTGTTCTG...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGAAGGTGGGTGTGTTTaGCTTCTCTATCATGGAAGA +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWREGGCV*LLYHGR
Trigger: TCTTCCATGATAGAGAAGGCAAACACACCCACCTTC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGGATCTGTGTTATGCTTaGAGGTGTCAGGGGTCAATG +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLDLCYA*RCQGSM
Trigger: CATTGACCCCTGACACCTGCAAGCATAACACAGATC...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGAAAGCACATCAGAAATaGCCAATGACAGACCACAGC +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRKAHQK*PMTDHS
Trigger: GCTGTGGTCTGTCATTGGGCATTTCTGATGTGCTTT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGAAATAAGTAGGGCATaGCTAGATGTAATCAGGGAG +
Preference number: 2 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTEISRA*LDVIRE
Trigger: CTCCCTGATTACATCTAGCCATGCCCTACTTATTTC...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGACTCCAAAATGCTTTaGCTCTCCCACTCTCCTAGT +
Preference number: 2 (lower is better)
Translates to: GAKINSPWQWDKMLILAPDSKML*LSHSPS
Trigger: ACTAGGAGAGTGGGAGAGCCAAAGCATTTTGGAGTC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGCCCAGGCACTTTACATaGACTCCAAAATGCTTTGGC +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLPRHFT*TPKCFG
Trigger: GCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGG...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGATCGTTCTTGAAAAGATaGGTGTCACATAGTCTGATG +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRSFLKR*VSHSLM
Trigger: CATCAGACTATGTGACACCCATCTTTTCAAGAACGA...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAGAGGAACTTCGTATTTaGGGATTAGCATCATCTTCA +
Preference number: 2 (lower is better)
Translates to: GAETSTTISRLWFSAGSLEELRI*GLASSS
Trigger: TGAAGATGATGCTAATCCCCAAATACGAAGTTCCTC...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATACTCTGGCCAGTCTCCTaGCGCCCTACAGAAGAAAAT +
Preference number: 2 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHILWPVS*RPTEEN
Trigger: ATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAG...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTAGGATTCTGCCAATCTaGAAGGGATGGGTGTTTCCC +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCRILPI*KGWVFP
Trigger: GGGAAACACCCATCCCTTCCAGATTGGCAGAATCCT...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCAGCTAAAGCAGCTCTaGCATCTCCTATTCCCACCT +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCQLKQL*HLLFPP
Trigger: AGGTGGGAATAGGAGATGCCAGAGCTGCTTTAGCTG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGGATTTTCAACGGCCCTaGTTCCCTATACTCAGGACA +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLDFQRP*FPILRT
Trigger: TGTCCTGAGTATAGGGAACCAGGGCCGTTGAAAATC...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp AAAGGAGAACCTGCCCATGCCTCCATGTCCCAATCAAAGCTGCCTTaGTCAGATAACCTGAAAACCAAGGTACTGGATTGTGTCATGACA +
Preference number: 2 (lower is better)
Translates to: KGEPAHASMSQSKLP*SDNLKTKVLDCVMT
Trigger: TGTCATGACACAATCCAGTACCTTGGTTTTCAGGTTATCTGACAAAGGCAGCTTTGATTGGGACATGGAGGCATGGGCAGGTTCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATACAGGGATTGAGGTATTaGATCGGCACACTCATTCCC +
Preference number: 2 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIQGLRY*IGTLIP
Trigger: GGGAATGAGTGTGCCGATTCAATACCTCAATCCCTG...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGGATGAGCTGTATTTGTaGAGTTCATATCAGAGCGAA +
Preference number: 2 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSDELYL*SSYQSE
Trigger: TTCGCTCTGATATGAACTTCACAAATACAGCTCATC...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGGATGAGCTGTATTTGTaGAGTTCATATCAGAGCGAA +
Preference number: 2 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEDELYL*SSYQSE
Trigger: TTCGCTCTGATATGAACTTCACAAATACAGCTCATC...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATTTGCACTTCGAGCAATaGCAAAAGACAATGCTTGTC +
Preference number: 2 (lower is better)
Translates to: PGSCSADLCQATHLTKPNLHFEQ*QKTMLV
Trigger: GACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAA...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAAACTAAGATCACACTaGATGGCGGAAACCTTGCTT +
Preference number: 2 (lower is better)
Translates to: SLKISGQSPGALQKKIGDKLRSH*MAETLL
Trigger: AAGCAAGGTTTCCGCCATTCAGTGTGATCTTAGTTT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAAGTGAGACAGGTAAATaGTTTAACTTATTGTGCTCC +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRSETGK*FNLLCS
Trigger: GGAGCACAATAAGTTAAATCATTTACCTGTCTCACT...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTAAAAGACAGCTCCTCTaGGGCCACAATTTTGTAAAT +
Preference number: 2 (lower is better)
Translates to: AHCCTLILPYLANSPSSGKRQLL*GHNFVN
Trigger: ATTTACAAAATTGTGGCCTCAGAGGAGCTGTCTTTT...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGAAAAGACAGCTCCTCTaGGGCCACAATTTTGTAAAT +
Preference number: 2 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSKRQLL*GHNFVN
Trigger: ATTTACAAAATTGTGGCCTCAGAGGAGCTGTCTTTT...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTTGGTCCACAGTTTATTaGTTCAAGTACATCGTGCAT +
Preference number: 2 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTWSTVY*FKYIVH
Trigger: ATGCACGATGTACTTGAATCAATAAACTGTGGACCA...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGGGTGTCACATAGTCTaGTGTGCTTTATCAAAGAAC +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRGCHIV*CALSKN
Trigger: GTTCTTTGATAAAGCACATCAGACTATGTGACACCC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATTTAGAGCTATTACGATaGAGAATTGGGGAGGGCAAT +
Preference number: 2 (lower is better)
Translates to: SLKISGQSPGALQKKIGDLELLR*RIGEGN
Trigger: ATTGCCCTCCCCAATTCTTCATCGTAATAGCTCTAA...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGACTTGGTAAGCATTTaGTGTTGCTTCTCAGGATAC +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRDLVSI*CCFSGY
Trigger: GTATCCTGAGAAGCAACATCAAATGCTTACCAAGTC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATACGTCTCCGAAGGACATaGAATGGAAGGATTCTGCCA +
Preference number: 2 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIRLRRT*NGRILP
Trigger: TGGCAGAATCCTTCCATTTCATGTCCTTCGGAGACG...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTAACACAGCCCCAGTTTaGTTTACAGCCCAAGTTACA +
Preference number: 2 (lower is better)
Translates to: GAKINSPWQWDKMLILAPNTAPV*FTAQVT
Trigger: TGTAACTTGGGCTGTAAAGCAAACTGGGGCTGTGTT...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACACAGGTATGCACGCTTaGACTTCGAGCAATGACAAA +
Preference number: 2 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHTGMHA*TSSNDK
Trigger: TTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGT...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTCTTCTCTATATTGTGTaGTTCTTCCTTCATGTGCTC +
Preference number: 2 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTLLYIV*FFLHVL
Trigger: GAGCACATGAAGGAAGAAGCACACAATATAGAGAAG...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTATATATAAACTCCCACTaGTCTTACATCTCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: GAETSTTISRLWFSAGSLYINSH*SYISFP
Trigger: GGGAAAAGAGATGTAAGAGCAGTGGGAGTTTATATA...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGCTGTGCATCCCAGCATaGATGTGTTTCCAAAGAAAG +
Preference number: 2 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQLCIPA*MCFQRK
Trigger: CTTTCTTTGGAAACACATCCATGCTGGGATGCACAG...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGCGCTCATAGATAACTaGCATTCCAAATATTTTGAC +
Preference number: 2 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRALIDN*HSKYFD
Trigger: GTCAAAATATTTGGAATGCCAGTTATCTATGAGCGC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTTCTCAGCGGACTAACTaGCGAATTTCCCACAAAGTC +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCSQRTN*RISHKV
Trigger: GACTTTGTGGGAAATTCGCCAGTTAGTCCGCTGAGA...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTACTGGATTGTGTCATaGCAAGTGTGTCAAGAGATG +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLYWIVS*QVCQEM
Trigger: CATCTCTTGACACACTTGTCATGACACAATCCAGTA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATCTTTGTCAGATAACCTaGAAACCAAGGTACTGGATT +
Preference number: 2 (lower is better)
Translates to: PGSCSADLCQATHLTKPNLCQIT*KPRYWI
Trigger: AATCCAGTACCTTGGTTTTCAGGTTATCTGACAAAG...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATCTTTGTCAGATAACCTaGAAACCAAGGTACTGGATT +
Preference number: 2 (lower is better)
Translates to: SLKISGQSPGALQKKIGDLCQIT*KPRYWI
Trigger: AATCCAGTACCTTGGTTTTCAGGTTATCTGACAAAG...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGCAGTTGGGTGTCTGCTaGATTTCCCTTGAAAACATT +
Preference number: 2 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQQLGVC*ISLENI
Trigger: AATGTTTTCAAGGGAAATTCAGCAGACACCCAACTG...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGGGGTGTCACATAGTCTaGTGTGCTTTATCAAAGAAC +
Preference number: 2 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQGCHIV*CALSKN
Trigger: GTTCTTTGATAAAGCACATCAGACTATGTGACACCC...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATCTTTTAGGTCGTTCTTaGAAAGATGGGTGTCACATA +
Preference number: 2 (lower is better)
Translates to: SLKISGQSPGALQKKIGDLLGRS*KDGCHI
Trigger: TATGTGACACCCATCTTTTCAAGAACGACCTAAAAG...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTAAACAAATGGTCACTTaGGAAGCAGAGCCGTGTCAA +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCKQMVT*EAEPCQ
Trigger: TTGACACGGCTCTGCTTCTCAAGTGACCATTTGTTT...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTTTAGAGCTATTACGATaGAGAATTGGGGAGGGCAAT +
Preference number: 2 (lower is better)
Translates to: GAKINSPWQWDKMLILAPLELLR*RIGEGN
Trigger: ATTGCCCTCCCCAATTCTTCATCGTAATAGCTCTAA...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTAACACAGCCCCAGTTTaGTTTACAGCCCAAGTTACA +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCNTAPV*FTAQVT
Trigger: TGTAACTTGGGCTGTAAAGCAAACTGGGGCTGTGTT...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTGTGTCAAGAGATGCTaGAGAACATTTACAAGCAGC +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLCVKRC*RTFTSS
Trigger: GCTGCTTGTAAATGTTCTGCAGCATCTCTTGACACA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAAGTGTGTCAAGAGATaGTGCAGAACATTTACAAGC +
Preference number: 2 (lower is better)
Translates to: SLKISGQSPGALQKKIGDKCVKR*CRTFTS
Trigger: GCTTGTAAATGTTCTGCAGCATCTCTTGACACACTT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCGGATCTGTAGAAATGTaGACCCTGGTTTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISGSVEM*TLVSSS
Trigger: GGAGGAGGAAACCAGGGTGCACATTTCTACAGATCC...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGAATGGCGGAAACCTTaGTTGGCTTGCTTTGATAAG +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCEWRKP*LACFDK
Trigger: CTTATCAAAGCAAGCCAAGCAAGGTTTCCGCCATTC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTTATATAAACTCCCACTaGTCTTACATCTCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTYINSH*SYISFP
Trigger: GGGAAAAGAGATGTAAGAGCAGTGGGAGTTTATATA...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGTGGTAATTCTCTCCTaGCTGTTGTCATTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRVVILS*LLSLLL
Trigger: TAAAAGCAATGACAACAGGCAGGAGAGAATTACCAC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCAGGCTGTGGTTCTCTaGAGGCAGTTTATTGGAATA +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCQAVVL*RQFIGI
Trigger: TATTCCAATAAACTGCCTGCAGAGAACCACAGCCTG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGGTCAATACAGCTCAATaGCAGGAATACGATGCCAAT +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLVNTAQ*QEYDAN
Trigger: ATTGGCATCGTATTCCTGGCATTGAGCTGTATTGAC...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTTCACTTGGATCCCAGTaGTTTTTCAGACCCTTTCTC +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCSLGSQ*FFRPFL
Trigger: GAGAAAGGGTCTGAAAAAGCACTGGGATCCAAGTGA...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTACTGAGCTCCTAAACTaGAATTTCAGCTATACAAGA +
Preference number: 2 (lower is better)
Translates to: AHCCTLILPYLANSPSSGTELLN*NFSYTR
Trigger: TCTTGTATAGCTGAAATTCCAGTTTAGGAGCTCAGT...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCCTTCTGAGTTTGGATaGAGCACTGCATCAGGTTTT +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCPSEFG*STASGF
Trigger: AAAACCTGATGCAGTGCTCCATCCAAACTCAGAAGG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGCTAATTAAATACAGTTaGGTGTCTGCTGAATTTCCC +
Preference number: 2 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSLIKYS*VSAEFP
Trigger: GGGAAATTCAGCAGACACCCAACTGTATTTAATTAG...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTCGTTCTTGAAAAGATaGGTGTCACATAGTCTGATG +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRSFLKR*VSHSLM
Trigger: CATCAGACTATGTGACACCCATCTTTTCAAGAACGA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGATTACGATGAAGAATTaGGGAGGGCAATACTTAGGC +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLITMKN*GGQYLG
Trigger: GCCTAAGTATTGCCCTCCCCAATTCTTCATCGTAAT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp CTTAATGACCTTCAGACCAAACTGCTCCAAACAGTGGCCAAGACGTaGCAGTCAGGAGTAAACACAATCCTTAGGAAAAGAACTGTGCAT +
Preference number: 2 (lower is better)
Translates to: LNDLQTKLLQTVAKT*QSGVNTILRKRTVH
Trigger: ATGCACAGTTCTTTTCCTAAGGATTGTGTTTACTCCTGACTGCAACGTCTTGGCCACTGTTTGGAGCAGTTTGGTCTGAAGGTCATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp TCCCAGCACTTTCTGAAGGTGGAATCTCCTCCTCTTTACTTAATGTaGGAGAAAAGTGGCCACCAGTACTCGATCATTGTAGATTCGGAA +
Preference number: 2 (lower is better)
Translates to: SQHFLKVESPPLYLM*EKSGHQYSIIVDSE
Trigger: TTCCGAATCTACAATGATCGAGTACTGGTGGCCACTTTTCTCCAACATTAAGTAAAGAGGAGGAGATTCCACCTTCAGAAAGTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp AACTTTAAAGCAAACTCTGCAGTGAAAAGTGTTTCCCCCACTCCCTaGGGCGAGGGAAGGGAGAAGAAGATAGATAATGAGGAGAACTAT +
Preference number: 2 (lower is better)
Translates to: NFKANSAVKSVSPTP*GEGREKKIDNEENY
Trigger: ATAGTTCTCCTCATTATCTATCTTCTTCTCCCTTCCCTCGCCCAAGGGAGTGGGGGAAACACTTTTCACTGCAGAGTTTGCTTTAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGGAACTGTTTCTCAACTaGGCTCCTAAACTGGAATTT +
Preference number: 2 (lower is better)
Translates to: DAELSATARGFSESAFDEELFLN*APKLEF
Trigger: AAATTCCAGTTTAGGAGCTCAGTTGAGAAACAGTTC...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGCTTTTAGGTCGTTCTTaGAAAGATGGGTGTCACATA +
Preference number: 2 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQLLGRS*KDGCHI
Trigger: TATGTGACACCCATCTTTTCAAGAACGACCTAAAAG...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTTTCCCTCCACAGGTATaGACGCTTGCACTTCGAGCA +
Preference number: 2 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCFPPQV*TLALRA
Trigger: TGCTCGAAGTGCAAGCGTGCATACCTGTGGAGGGAA...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTAGAGCTGAAAGACTATaGCTTTATCTTGGATTTCAT +
Preference number: 2 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTRAERL*LYLGFH
Trigger: ATGAAATCCAAGATAAAGGCATAGTCTTTCAGCTCT...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTTTCATCAAAATCAACTaGAATGAGATACTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: AHCCTLILPYLANSPSSGFIKIN*NEILPA
Trigger: TGCAGGAAGTATCTCATTGCAGTTGATTTTGATGAA...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTTTCATCAAAATCAACTaGAATGAGATACTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTFIKIN*NEILPA
Trigger: TGCAGGAAGTATCTCATTGCAGTTGATTTTGATGAA...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCAGGGAGTCACGGTCTaGATGGACCCTAGTTACTGT +
Preference number: 2 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCQGVTV*MDPSYC
Trigger: ACAGTAACTAGGGTCCATGCAGACCGTGACTCCCTG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACCTTCTCTATATTGTGTaGTTCTTCCTTCATGTGCTC +
Preference number: 2 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHLLYIV*FFLHVL
Trigger: GAGCACATGAAGGAAGAAGCACACAATATAGAGAAG...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTTCTCTAAAGAACTTCTaGCTGATTCAAGGAACTCTG +
Preference number: 2 (lower is better)
Translates to: GAKINSPWQWDKMLILAPSLKNF*LIQGTL
Trigger: CAGAGTTCCTTGAATCAGGCAGAAGTTCTTTAGAGA...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGTCAATACAGCTCAATaGCAGGAATACGATGCCAAT +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCVNTAQ*QEYDAN
Trigger: ATTGGCATCGTATTCCTGGCATTGAGCTGTATTGAC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATACTGAGCTCCTAAACTaGAATTTCAGCTATACAAGA +
Preference number: 2 (lower is better)
Translates to: PGSCSADLCQATHLTKPNTELLN*NFSYTR
Trigger: TCTTGTATAGCTGAAATTCCAGTTTAGGAGCTCAGT...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGCGCTCATAGATAACTaGCATTCCAAATATTTTGAC +
Preference number: 2 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRALIDN*HSKYFD
Trigger: GTCAAAATATTTGGAATGCCAGTTATCTATGAGCGC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGAAATAAGTAGGGCATaGCTAGATGTAATCAGGGAG +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCEISRA*LDVIRE
Trigger: CTCCCTGATTACATCTAGCCATGCCCTACTTATTTC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp AATTCTTCTTCCTACTTCACTCTAGTCTTAGGATCTGTGTTATGCTaGCAGGTGTCAGGGGTCAATGTGCACATTCGAAGTTTTGCTCCT +
Preference number: 2 (lower is better)
Translates to: NSSSYFTLVLGSVLC*QVSGVNVHIRSFAP
Trigger: AGGAGCAAAACTTCGAATGTGCACATTGACCCCTGACACCTGCAAGCATAACACAGATCCTAAGACTAGAGTGAAGTAGGAAGAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp TATTGCAAAACTTGTACTTCTACAGGAGATGTTCTTCCAAGGGTGTaGGCAATAAAGGCTGTTGCAAAACAGCTATGTGAGGCAGCCATG +
Preference number: 2 (lower is better)
Translates to: YCKTCTSTGDVLPRV*AIKAVAKQLCEAAM
Trigger: CATGGCTGCCTCACATAGCTGTTTTGCAACAGCCTTTATTGCCAACACCCTTGGAAGAACATCTCCTGTAGAAGTACAAGTTTTGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCAGGGATTGAGGTATTaGATCGGCACACTCATTCCC +
Preference number: 2 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCQGLRY*IGTLIP
Trigger: GGGAATGAGTGTGCCGATTCAATACCTCAATCCCTG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCCATGCATTCTTCAATaGAGGCTGCCCTTGTTAGCG +
Preference number: 2 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCPCILQ*RLPLLA
Trigger: CGCTAACAAGGGCAGCCTTCATTGAAGAATGCATGG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACAGTGAGACAGGTAAATaGTTTAACTTATTGTGCTCC +
Preference number: 2 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHSETGK*FNLLCS
Trigger: GGAGCACAATAAGTTAAATCATTTACCTGTCTCACT...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAGGTGGCACATTCTGCTaGAAACCACCCCTGCATTGT +
Preference number: 2 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSGGTFC*KPPLHC
Trigger: ACAATGCAGGGGTGGTTTTCAGCAGAATGTGCCACC...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAGACTTGGTAAGCATTTaGTGTTGCTTCTCAGGATAC +
Preference number: 2 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIDLVSI*CCFSGY
Trigger: GTATCCTGAGAAGCAACATCAAATGCTTACCAAGTC...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAGTTTGGATGGAGCACTaGATCAGGTTTTTCACAGAA +
Preference number: 2 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIVWMEH*IRFFTE
Trigger: TTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAAC...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATTCTTTTGTACAAGAGTaGAGAACTGTTTACAGTACA +
Preference number: 2 (lower is better)
Translates to: PGSCSADLCQATHLTKPNSFVQE*RTVYST
Trigger: TGTACTGTAAACAGTTCTGCACTCTTGTACAAAAGA...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATATGTGTCAAGAGATGCTaGAGAACATTTACAAGCAGC +
Preference number: 2 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHICVKRC*RTFTSS
Trigger: GCTGCTTGTAAATGTTCTGCAGCATCTCTTGACACA...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTAGGAGAACCTGCCCATaGCTCCATGTCCCAATCAAA +
Preference number: 2 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCRRTCP*LHVPIK
Trigger: TTTGATTGGGACATGGAGGCATGGGCAGGTTCTCCT...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTCACATAGTCTGATGTaGTTTATCAAAGAACAGAGG +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLSHSLM*FIKEQR
Trigger: CCTCTGTTCTTTGATAAAGCACATCAGACTATGTGA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGCGCTCATAGATAACTaGCATTCCAAATATTTTGAC +
Preference number: 2 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHALIDN*HSKYFD
Trigger: GTCAAAATATTTGGAATGCCAGTTATCTATGAGCGC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCACTCTGGCCAGTCTCCTaGCGCCCTACAGAAGAAAAT +
Preference number: 2 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSLWPVS*RPTEEN
Trigger: ATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAG...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp CGGAAACCTTGCTTGGCTTGCTTTGATAAGAATCTCTCTAACGTGTaGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCAAC +
Preference number: 2 (lower is better)
Translates to: RKPCLACFDKNLSNV*SLNKMLPPIYLISN
Trigger: GTTGCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAGATTCTTATCAAAGCAAGCCAAGCAAGGTTTCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp TCAATACAGCTCAATGCCAGGAATACGATGCCAATAGGCCAGTTCTaGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: SIQLNARNTMPIGQF*LPYDRIKPLNVKAF
Trigger: AAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAACTGGCCTATTGGCATCGTATTCCTGGCATTGAGCTGTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAGTGTCGTTCAGGGATTaGGGTATTGAATCGGCACAC +
Preference number: 2 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSVSFRD*GIESAH
Trigger: GTGTGCCGATTCAATACCTCAATCCCTGAACGACAC...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCTACTGGATTGTGTCATaGCAAGTGTGTCAAGAGATG +
Preference number: 2 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISYWIVS*QVCQEM
Trigger: CATCTCTTGACACACTTGTCATGACACAATCCAGTA...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCTGTCACGGAGGACATaGAACAAGATGCAAGCAGAT +
Preference number: 2 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCLSRRT*NKMQAD
Trigger: ATCTGCTTGCATCTTGTTTCATGTCCTCCGTGACAG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCCAGTTGGGTGTCTGCTaGATTTCCCTTGAAAACATT +
Preference number: 2 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISQLGVC*ISLENI
Trigger: AATGTTTTCAAGGGAAATTCAGCAGACACCCAACTG...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAGTTAGCAAAGCCAGATaGCTTATCACCAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSVSKAR*LITRVL
Trigger: CAGGACCCTGGTGATAAGGCATCTGGCTTTGCTAAC...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTTCATCAAAATCAACTaGAATGAGATACTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLFIKIN*NEILPA
Trigger: TGCAGGAAGTATCTCATTGCAGTTGATTTTGATGAA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTACTGAGCTCCTAAACTaGAATTTCAGCTATACAAGA +
Preference number: 2 (lower is better)
Translates to: STGMHACTSSNDKRQCLSTELLN*NFSYTR
Trigger: TCTTGTATAGCTGAAATTCCAGTTTAGGAGCTCAGT...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCTAATTAAATACAGTTaGGTGTCTGCTGAATTTCCC +
Preference number: 2 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCLIKYS*VSAEFP
Trigger: GGGAAATTCAGCAGACACCCAACTGTATTTAATTAG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGACCCTAGTTACTGTTTaGTTTCATCAAAATCAACTG +
Preference number: 2 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQTLVTV*FHQNQL
Trigger: CAGTTGATTTTGATGAAACCAAACAGTAACTAGGGT...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGACCCTAGTTACTGTTTaGTTTCATCAAAATCAACTG +
Preference number: 2 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLTLVTV*FHQNQL
Trigger: CAGTTGATTTTGATGAAACCAAACAGTAACTAGGGT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAGAGCAAGACAGATCATaGGGGTATGAATCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSEQDRS*GYESRR
Trigger: CCTCCTGGATTCATACCCCCATGATCTGTCTTGCTC...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAGCTCATCAGAGACACTaGGAGCAACAAAGGGATTCC +
Preference number: 2 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSAHQRH*EQQRDS
Trigger: GGAATCCCTTTGTTGCTCCCAGTGTCTCTGATGAGC...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp AGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGTTCTaGAAAAGATGGGTGTCACATAGTCTGATGTGCTTTATCAAAGAA +
Preference number: 2 (lower is better)
Translates to: SGNSLLPVVIAFRSF*KRWVSHSLMCFIKE
Trigger: TTCTTTGATAAAGCACATCAGACTATGTGACACCCATCTTTTCAAGAACGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTAAACTAAGATCACACTaGATGGCGGAAACCTTGCTT +
Preference number: 2 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCKLRSH*MAETLL
Trigger: AAGCAAGGTTTCCGCCATTCAGTGTGATCTTAGTTT...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTATGGAAGATGATAAGTaGTTAGCAAAGCCAGATGCC +
Preference number: 2 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCMEDDK*LAKPDA
Trigger: GGCATCTGGCTTTGCTAACCACTTATCATCTTCCAT...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTAATGTTGGAGAAAAGTaGCCACCAGTACTCGATCAT +
Preference number: 2 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCNVGEK*PPVLDH
Trigger: ATGATCGAGTACTGGTGGCCACTTTTCTCCAACATT...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTGAACTGTTTCTCAACTaGGCTCCTAAACTGGAATTT +
Preference number: 2 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCELFLN*APKLEF
Trigger: AAATTCCAGTTTAGGAGCTCAGTTGAGAAACAGTTC...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCATTGCACTTCGAGCAATaGCAAAAGACAATGCTTGTC +
Preference number: 2 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSLHFEQ*QKTMLV
Trigger: GACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAA...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCTCTTTTGTACAAGAGTaGAGAACTGTTTACAGTACA +
Preference number: 2 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISSFVQE*RTVYST
Trigger: TGTACTGTAAACAGTTCTGCACTCTTGTACAAAAGA...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCAGAGCTGAAAGACTATaGCTTTATCTTGGATTTCAT +
Preference number: 2 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISRAERL*LYLGFH
Trigger: ATGAAATCCAAGATAAAGGCATAGTCTTTCAGCTCT...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAAACATGGCCCACTGTTaGACCTTGATTTTGCCTTAT +
Preference number: 2 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSNMAHC*TLILPY
Trigger: ATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTT...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAAATGTTGGAGAAAAGTaGCCACCAGTACTCGATCAT +
Preference number: 2 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSNVGEK*PPVLDH
Trigger: ATGATCGAGTACTGGTGGCCACTTTTCTCCAACATT...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCATCTGAGTACCTACTATaGGTCATGCTTTCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSSEYLL*VMLSAE
Trigger: TTCAGCAGAAAGCATGACCCATAGTAGGTACTCAGA...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 90 bp AATTCGAACATCACAAAACCACTTCCAAAGTCCATATTGCAAAACTaGTACTTCTACAGGAGATGTTCTTCCAAGGGTGTTGGCAATAAA +
Preference number: 2 (lower is better)
Translates to: NSNITKPLPKSILQN*YFYRRCSSKGVGNK
Trigger: TTTATTGCCAACACCCTTGGAAGAACATCTCCTGTAGAAGTACAAGTTTTGCAATATGGACTTTGGAAGTGGTTTTGTGATGTTCGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR TCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCACTTTGTCAGATAACCTaGAAACCAAGGTACTGGATT +
Preference number: 2 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSLCQIT*KPRYWI
Trigger: AATCCAGTACCTTGGTTTTCAGGTTATCTGACAAAG...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR GCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAGTGGTAATTCTCTCCTaGCTGTTGTCATTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSVVILS*LLSLLL
Trigger: TAAAAGCAATGACAACAGGCAGGAGAGAATTACCAC...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp TGGCACCTGCCAGAGGCAGACAGCCGAAGTCGCAGCTaGGCTGGTCAAATGAGCTTGGAGACCTTAGGGGGC +
Preference number: 3 (lower is better)
Translates to: WHLPEADSRSRS*AGQMSLETLGG
Trigger: GCCCCCTAAGGTCTCCAAGCTCATTTGACCAGCGCAGCTGCGACTTCGGCTGTCTGCCTCTGGCAGGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp CCAAGCTCATGGCCCTCTGAGGCCCAGAGGAGTGGCTaGCCAAGTGCTCAGAGGTGGCCTTTTAGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: PSSWPSEAQRSG*PSAQRWPFRLR
Trigger: CCTGAGCCTAAAAGGCCACCTCTGAGCACTTGGGCAGCCACTCCTCTGGGCCTCAGAGGGCCATGAGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp CCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTaGCAGAGGCAGACAGCCGAAGTCGCAGCTGCGCTG +
Preference number: 3 (lower is better)
Translates to: PMAVGQDADIGT*QRQTAEVAAAL
Trigger: CAGCGCAGCTGCGACTTCGGCTGTCTGCCTCTGGCAGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp CCTGCCAGAGGCAGACAGCCGAAGTCGCAGCTGCGCTaGTCAAATGAGCTTGGAGACCTTAGGGGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: PARGRQPKSQLR*SNELGDLRGLR
Trigger: TCTCAGCCCCCTAAGGTCTCCAAGCTCATTTGACCAGCGCAGCTGCGACTTCGGCTGTCTGCCTCTGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACAAGTCTACCCCCGTTTaGGGCTCTGTCCTTCCTGGC +
Preference number: 3 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNKSTPV*GSVLPG
Trigger: GCCAGGAAGGACAGAGCCCAAAACGGGGGTAGACTT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGCAGATCCATTCACCCTaGGAACATGGCCCACTGTTG +
Preference number: 3 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEQIHSP*EHGPLL
Trigger: CAACAGTGGGCCATGTTCCAAGGGTGAATGGATCTG...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp GATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTaGGCCTTCTGCTGTCACTGTGCCCAGGCCAGTGGT +
Preference number: 3 (lower is better)
Translates to: DFALSRQLSKLR*AFCCHCAQASG
Trigger: ACCACTGGCCTGGGCACAGTGACAGCAGAAGGCCCACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACGAGAACCACGCTTTATaGGCGGAGCCTTATGTGCCA +
Preference number: 3 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNENHAL*AEPYVP
Trigger: TGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTC...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp GTTGCAAAACAGCTATGTGAGGCAGCCATGTGGGAGTaGCCCCAGGAGAATGCTCCGGTGTCCTCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: VAKQLCEAAMWE*PQENAPVSSGK
Trigger: CTTTCCAGAGGACACCGGAGCATTCTCCTGGGGTCACTCCCACATGGCTGCCTCACATAGCTGTTTTGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp TTATCTCGCCAACTCTCCAAGCTCAGGTGGGCCTTCTaGTGTCACTGTGCCCAGGCCAGTGGTAATTCTCTC +
Preference number: 3 (lower is better)
Translates to: LSRQLSKLRWAF*CHCAQASGNSL
Trigger: GAGAGAATTACCACTGGCCTGGGCACAGTGACAGCAGAAGGCCCACCTGAGCTTGGAGAGTTGGCGAGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACAGAGAAAACCTTCTATaGATGCCGGTGCTGGGCTTG +
Preference number: 3 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNRENLL*MPVLGL
Trigger: CAAGCCCAGCACCGGCATCAATAGAAGGTTTTCTCT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACGGATCTGTGTTATGCTaGCAGGTGTCAGGGGTCAAT +
Preference number: 3 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNGSVLC*QVSGVN
Trigger: ATTGACCCCTGACACCTGCAAGCATAACACAGATCC...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp AAACCTTCTATTGATGCCGGTGCTGGGCTTGGCAGCTaGCCTGGAGCAAAAATTAACTCCCCATGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: KPSIDAGAGLGS*PGAKINSPWQW
Trigger: CCACTGCCATGGGGAGTTAATTTTTGCTCCAGGGCAGCTGCCAAGCCCAGCACCGGCATCAATAGAAGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp ACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTaGCAGCGAACTGAGAAGGTCCAGGGTACCTTCACC +
Preference number: 3 (lower is better)
Translates to: TERTTLYWRSLM*QRTEKVQGTFT
Trigger: GGTGAAGGTACCCTGGACCTTCTCAGTTCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp TCTGAATATGGACCAAATCAAAGGCTGAGGCAGCTCTaGGGGAGCCCTGTCCGGTGTTTGAGGAACTCGAAG +
Preference number: 3 (lower is better)
Translates to: SEYGPNQRLRQL*GSPVRCLRNSK
Trigger: CTTCGAGTTCCTCAAACACCGGACAGGGCTCCCCCAGAGCTGCCTCAGCCTTTGATTTGGTCCATATTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp TATTGGAATAGGGTTTGTGCGCCTTCTCCACCCCTCTaGGCTGGGTCTCAGAACAATCAGAAGTGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: YWNRVCAPSPPL*AGSQNNQKCRW
Trigger: CCACCTGCACTTCTGATTGTTCTGAGACCCAGCCCAGAGGGGTGGAGAAGGCGCACAAACCCTATTCCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp CTTGGCAGCTGCCCTGGAGCAAAAATTAACTCCCCATaGCAGTGGGACAAGATGCTGATATTGGCACCTGCC +
Preference number: 3 (lower is better)
Translates to: LGSCPGAKINSP*QWDKMLILAPA
Trigger: GGCAGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCCAGGGCAGCTGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp GTGGGAGTGACCCCAGGAGAATGCTCCGGTGTCCTCTaGAAAGCAGATACACAGGACGATGGACAAATGTGT +
Preference number: 3 (lower is better)
Translates to: VGVTPGECSGVL*KADTQDDGQMC
Trigger: ACACATTTGTCCATCGTCCTGTGTATCTGCTTTCCAGAGGACACCGGAGCATTCTCCTGGGGTCACTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACTCAGGGATTGAGGTATaGAATCGGCACACTCATTCC +
Preference number: 3 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNSGIEV*NRHTHS
Trigger: GGAATGAGTGTGCCGATTCAATACCTCAATCCCTGA...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp CTCAGAACAATCAGAAGTGCAGGTGGCACATTCTGCTaGAAACCACCCCTGCATTGTCTCTGGGAGGGAGGA +
Preference number: 3 (lower is better)
Translates to: LRTIRSAGGTFC*KPPLHCLWEGG
Trigger: TCCTCCCTCCCAGAGACAATGCAGGGGTGGTTTTCAGCAGAATGTGCCACCTGCACTTCTGATTGTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp GCCCAAGTGCTCAGAGGTGGCCTTTTAGGCTCAGGATaGAGGTGGGTGTGTTTGCCTTCTCTATCATGGAAG +
Preference number: 3 (lower is better)
Translates to: AQVLRGGLLGSG*RWVCLPSLSWK
Trigger: CTTCCATGATAGAGAAGGCAAACACACCCACCTTCATCCTGAGCCTAAAAGGCCACCTCTGAGCACTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp AGTCACCCGGTCTCGCCCCAGGTAATCAACCTTTACTaGTTTTCAACGGCCCTGGTTCCCTATACTCAGGAC +
Preference number: 3 (lower is better)
Translates to: SHPVSPQVINLY*FSTALVPYTQD
Trigger: GTCCTGAGTATAGGGAACCAGGGCCGTTGAAAATCAGTAAAGGTTGATTACCTGGGGCGAGACCGGGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp CTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTATTaGAATAGGGTTTGTGCGCCTTCTCCACCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: LLAGCGSLQAVY*NRVCAPSPPLW
Trigger: CCAGAGGGGTGGAGAAGGCGCACAAACCCTATTCCAATAAACTGCCTGCAGAGAACCACAGCCTGCTAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp TATCATGGAAGAGCTGGATTTGCCATTGTTTGCACGTaGCCCAGGACTTACCCCTGGGAGACTGAGTCTCAG +
Preference number: 3 (lower is better)
Translates to: YHGRAGFAIVCT*PRTYPWETESQ
Trigger: CTGAGACTCAGTCTCCCAGGGGTAAGTCCTGGGCCACGTGCAAACAATGGCAAATCCAGCTCTTCCATGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp ACACAATATAACATGGAGACCCGCCCGAAGCCTAACTaGAGGCTTCTCAACAAAGCTCAGTCGACCCCTCAC +
Preference number: 3 (lower is better)
Translates to: TQYNMETRPKPN*RLLNKAQSTPH
Trigger: GTGAGGGGTCGACTGAGCTTTGTTGAGAAGCCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGACTATGCCTTTATCTaGGATTTCATAGATTTCCCC +
Preference number: 3 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEDYAFI*DFIDFP
Trigger: GGGGAAATCTATGAAATCCAAGATAAAGGCATAGTC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGCGGATGTGAGCCTGTaGGGAGAGATGCTAGTTTCT +
Preference number: 3 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRADVSL*GEMLVS
Trigger: AGAAACTAGCATCTCTCCCAACAGGCTCACATCCGC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp CCATTCACCCTTGGAACATGGCCCACTGTTGCACCTTaGTTTTGCCTTATCTCGCCAACTCTCCAAGCTCAG +
Preference number: 3 (lower is better)
Translates to: PFTLGTWPTVAP*FCLISPTLQAQ
Trigger: CTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTCCAAGGGTGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATCAAAGCCTTCTGAGTTaGGATGGAGCACTGCATCAG +
Preference number: 3 (lower is better)
Translates to: SLKISGQSPGALQKKIGDQSLLS*DGALHQ
Trigger: CTGATGCAGTGCTCCATCCAAACTCAGAAGGCTTTG...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGAAACACAGCCCCAGTTaGCTTTACAGCCCAAGTTAC +
Preference number: 3 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSKHSPS*LYSPSY
Trigger: GTAACTTGGGCTGTAAAGCAAACTGGGGCTGTGTTT...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTACCACAAAGCCCACTCTaGGTAAGAATCTTCTTTGTG +
Preference number: 3 (lower is better)
Translates to: GAETSTTISRLWFSAGSLPQSPL*VRIFFV
Trigger: CACAAAGAAGATTCTTACCAAGAGTGGGCTTTGTGG...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGACCACAAAGCCCACTCTaGGTAAGAATCTTCTTTGTG +
Preference number: 3 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRPQSPL*VRIFFV
Trigger: CACAAAGAAGATTCTTACCAAGAGTGGGCTTTGTGG...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGACCTCTTTACTTAATGTaGGAGAAAAGTGGCCACCAG +
Preference number: 3 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRPLYLM*EKSGHQ
Trigger: CTGGTGGCCACTTTTCTCCAACATTAAGTAAAGAGG...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACAGCCCTGTCCGGTGTTaGAGGAACTCGAAGACACAA +
Preference number: 3 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHSPVRC*RNSKTQ
Trigger: TTGTGTCTTCGAGTTCCTCAAACACCGGACAGGGCT...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGAGCCCTGTCCGGTGTTaGAGGAACTCGAAGACACAA +
Preference number: 3 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLSPVRC*RNSKTQ
Trigger: TTGTGTCTTCGAGTTCCTCAAACACCGGACAGGGCT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGATACTGATGGAGAAGTaGTCACCCCTGGGGTTTGTC +
Preference number: 3 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRILMEK*SPLGFV
Trigger: GACAAACCCCAGGGGTGACAACTTCTCCATCAGTAT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGAGCTGGATTTGCCATaGTTTGCACGTGGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCELDLP*FARGPG
Trigger: TCCTGGGCCACGTGCAAACAATGGCAAATCCAGCTC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp GCCCATCCTCAGAGTGTATGCAAGACAGGAAGTGTCTaGATATGGACCAAATCAAAGGCTGAGGCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: AHPQSVCKTGSV*IWTKSKAEAAL
Trigger: CAGAGCTGCCTCAGCCTTTGATTTGGTCCATATTCAGACACTTCCTGTCTTGCATACACTCTGAGGATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp AAGCAGCCACCAGTTCCCTCCACAGGTATGCACGCTTaGACTTCGAGCAATGACAAAAGACAATGCTTGTCT +
Preference number: 3 (lower is better)
Translates to: KQPPVPSTGMHA*TSSNDKRQCLS
Trigger: AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGAGGGAACTGGTGGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp TCCCAGCATGGATGTGTTTCCAAAGAAAGGAGAACCTaGCCATGCCTCCATGTCCCAATCAAAGCTGCCTTT +
Preference number: 3 (lower is better)
Translates to: SQHGCVSKERRT*PCLHVPIKAAF
Trigger: AAAGGCAGCTTTGATTGGGACATGGAGGCATGGGCAGGTTCTCCTTTCTTTGGAAACACATCCATGCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp GATGCAAGCAGATCCTTAATGACCTTCAGACCAAACTaGTCCAAACAGTGGCCAAGACGTTGCAGTCAGGAG +
Preference number: 3 (lower is better)
Translates to: DASRSLMTFRPN*SKQWPRRCSQE
Trigger: CTCCTGACTGCAACGTCTTGGCCACTGTTTGGAGCAGTTTGGTCTGAAGGTCATTAAGGATCTGCTTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp GCAAACACCAGCAGGCAAAGGGGATCTGTAGAAATGTaGACCCTGGTTTCCTCCTCCATCTCTTCTACCAAT +
Preference number: 3 (lower is better)
Translates to: ANTSRQRGSVEM*TLVSSSISSTN
Trigger: ATTGGTAGAAGAGATGGAGGAGGAAACCAGGGTGCACATTTCTACAGATCCCCTTTGCCTGCTGGTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp CTCAGATCCATTCACCCTTGGAACATGGCCCACTGTTaGACCTTGATTTTGCCTTATCTCGCCAACTCTCCA +
Preference number: 3 (lower is better)
Translates to: LRSIHPWNMAHC*TLILPYLANSP
Trigger: TGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTCCAAGGGTGAATGGATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp CCTCAGGAGGACACATTCAGGGTCAATACAGCTCAATaGCAGGAATACGATGCCAATAGGCCAGTTCTTGCT +
Preference number: 3 (lower is better)
Translates to: PQEDTFRVNTAQ*QEYDANRPVLA
Trigger: AGCAAGAACTGGCCTATTGGCATCGTATTCCTGGCATTGAGCTGTATTGACCCTGAATGTGTCCTCCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp AAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTaGAACATGGCCCACTGTTGCACCTTGATTTTGCCT +
Preference number: 3 (lower is better)
Translates to: KEHQRTLRSIHP*NMAHCCTLILP
Trigger: AGGCAAAATCAAGGTGCAACAGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATAAACACAGCCCCAGTTaGCTTTACAGCCCAAGTTAC +
Preference number: 3 (lower is better)
Translates to: PGSCSADLCQATHLTKPNKHSPS*LYSPSY
Trigger: GTAACTTGGGCTGTAAAGCAAACTGGGGCTGTGTTT...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTACAGTGGCCAAGACGTaGCAGTCAGGAGTAAACACA +
Preference number: 3 (lower is better)
Translates to: GAKINSPWQWDKMLILAPTVAKT*QSGVNT
Trigger: TGTGTTTACTCCTGACTGCAACGTCTTGGCCACTGT...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTCTAATGTCAACCCTCTaGATCCACAAACCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: AHCCTLILPYLANSPSSGLMSTL*IHKPSF
Trigger: GAAGGAAGGTTTGTGGATCAAGAGGGTTGACATTAG...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACAGAAAAATGAGATATTaGTTGGTGACAGATGAGGCT +
Preference number: 3 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNRKMRY*LVTDEA
Trigger: AGCCTCATCTGTCACCAACAAATATCTCATTTTTCT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAGCTTTTAGGTCGTTCTaGAAAAGATGGGTGTCACAT +
Preference number: 3 (lower is better)
Translates to: GAETSTTISRLWFSAGSLAFRSF*KRWVSH
Trigger: ATGTGACACCCATCTTTTCAAGAACGACCTAAAAGC...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATGAACATGGCCCACTGTaGCACCTTGATTTTGCCTTA +
Preference number: 3 (lower is better)
Translates to: SLKISGQSPGALQKKIGDEHGPL*HLDFAL
Trigger: TAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTC...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGCGGATGTGAGCCTGTaGGGAGAGATGCTAGTTTCT +
Preference number: 3 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCADVSL*GEMLVS
Trigger: AGAAACTAGCATCTCTCCCAACAGGCTCACATCCGC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp TCCCTCCACAGGTATGCACGCTTGCACTTCGAGCAATaGCAAAAGACAATGCTTGTCTGTTCTGTTTCCTCC +
Preference number: 3 (lower is better)
Translates to: SLHRYARLHFEQ*QKTMLVCSVSS
Trigger: GGAGGAAACAGAACAGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp AGAACAGAGGCAAGAGCAAGACAGATCATGGGGGTATaGATCCAGGAGGTCATCAACAGCCTCGAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: RTEARARQIMGV*IQEVINSLERE
Trigger: TTCTCTTTCGAGGCTGTTGATGACCTCCTGGATTCATACCCCCATGATCTGTCTTGCTCTTGCCTCTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp AGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTaGTCAGTAAGGAACATCAGCGGACTCTCAGATCCA +
Preference number: 3 (lower is better)
Translates to: RNSGCFVRRSLF*SVRNISGLSDP
Trigger: TGGATCTGAGAGTCCGCTGATGTTCCTTACTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp ACGCAAGATGGGAAAACTTTAAAGCAAACTCTGCAGTaGAAAGTGTTTCCCCCACTCCCTTGGGCGAGGGAA +
Preference number: 3 (lower is better)
Translates to: TQDGKTLKQTLQ*KVFPPLPWARE
Trigger: TTCCCTCGCCCAAGGGAGTGGGGGAAACACTTTTCACTGCAGAGTTTGCTTTAAAGTTTTCCCATCTTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp ATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATaGTTGTCTGTTCTGTTTCCTCCTGCCTGTCCACAG +
Preference number: 3 (lower is better)
Translates to: MHACTSSNDKRQ*LSVLFPPACPQ
Trigger: CTGTGGACAGGCAGGAGGAAACAGAACAGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp GATGCCTTATCACCAGGGTCCTGTTCTGCTGATCTGTaGCAAGCAACTCATCTCACCAAACCTAATGTCAAC +
Preference number: 3 (lower is better)
Translates to: DALSPGSCSADL*QATHLTKPNVN
Trigger: GTTGACATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGGTGATAAGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp ACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTaGTTCTGCGATTTCCATTCTCCTCTCCACATCCGA +
Preference number: 3 (lower is better)
Translates to: TDHSQIWQGKLI*FCDFHSPLHIR
Trigger: TCGGATGTGGAGAGGAGAATGGAAATCGCAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCAAAGCCTTCTGAGTTaGGATGGAGCACTGCATCAG +
Preference number: 3 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCQSLLS*DGALHQ
Trigger: CTGATGCAGTGCTCCATCCAAACTCAGAAGGCTTTG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAAGCTATATTGGACTTTaGTTAGGTAAAGGGCTTCTC +
Preference number: 3 (lower is better)
Translates to: GAETSTTISRLWFSAGSLSYIGL*LGKGLL
Trigger: GAGAAGCCCTTTACCTAACAAAAGTCCAATATAGCT...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTCAATCAAAGCTGCCTTaGTCAGATAACCTGAAAACC +
Preference number: 3 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTQSKLP*SDNLKT
Trigger: GGTTTTCAGGTTATCTGACAAAGGCAGCTTTGATTG...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTACAGTGGCCAAGACGTaGCAGTCAGGAGTAAACACA +
Preference number: 3 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCTVAKT*QSGVNT
Trigger: TGTGTTTACTCCTGACTGCAACGTCTTGGCCACTGT...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATCTAATGTCAACCCTCTaGATCCACAAACCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: SLKISGQSPGALQKKIGDLMSTL*IHKPSF
Trigger: GAAGGAAGGTTTGTGGATCAAGAGGGTTGACATTAG...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAGACTATGCCTTTATCTaGGATTTCATAGATTTCCCC +
Preference number: 3 (lower is better)
Translates to: GAETSTTISRLWFSAGSLDYAFI*DFIDFP
Trigger: GGGGAAATCTATGAAATCCAAGATAAAGGCATAGTC...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTAATCTCTCTAACGTGTaGTCCCTGAACAAGATGCTT +
Preference number: 3 (lower is better)
Translates to: AHCCTLILPYLANSPSSGNLSNV*SLNKML
Trigger: AAGCATCTTGTTCAGGGACAACACGTTAGAGAGATT...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTGGCGGAAACCTTGCTaGGCTTGCTTTGATAAGAAT +
Preference number: 3 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRWRKPC*ACFDKN
Trigger: ATTCTTATCAAAGCAAGCCAAGCAAGGTTTCCGCCA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAAGCCCTGTCCGGTGTTaGAGGAACTCGAAGACACAA +
Preference number: 3 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHISPVRC*RNSKTQ
Trigger: TTGTGTCTTCGAGTTCCTCAAACACCGGACAGGGCT...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTGTTGCACCTTGATTTaGCCTTATCTCGCCAACTCT +
Preference number: 3 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRCCTLI*PYLANS
Trigger: AGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGAACATGGCCCACTGTaGCACCTTGATTTTGCCTTA +
Preference number: 3 (lower is better)
Translates to: GAKINSPWQWDKMLILAPEHGPL*HLDFAL
Trigger: TAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGGAGGAACTTCGTATTaGGGGATTAGCATCATCTTC +
Preference number: 3 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRGGTSY*GISIIF
Trigger: GAAGATGATGCTAATCCCCAAATACGAAGTTCCTCC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGAGCACTGCTGACTGTTaGCTTTCCTCAGCTAAAGCA +
Preference number: 3 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLSTADC*LSSAKA
Trigger: TGCTTTAGCTGAGGAAAGCAAACAGTCAGCAGTGCT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTTCCCCACTCTCTATTTaGACGAAAAGACAGATACTA +
Preference number: 3 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTSPLSI*TKRQIL
Trigger: TAGTATCTGTCTTTTCGTCAAAATAGAGAGTGGGGA...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACCTAATGTCAACCCTCTaGATCCACAAACCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHLMSTL*IHKPSF
Trigger: GAAGGAAGGTTTGTGGATCAAGAGGGTTGACATTAG...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTAGTAGCGAATCATTTTaGCTTTTAAGCACGCCAAGA +
Preference number: 3 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTSSESF*LLSTPR
Trigger: TCTTGGCGTGCTTAAAAGCAAAAATGATTCGCTACT...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGATTCTCTCCTGCCTGTaGTCATTGCTTTTAGGTCGT +
Preference number: 3 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLILSCL*SLLLGR
Trigger: ACGACCTAAAAGCAATGACAACAGGCAGGAGAGAAT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTATTCTCTCCTGCCTGTaGTCATTGCTTTTAGGTCGT +
Preference number: 3 (lower is better)
Translates to: GAKINSPWQWDKMLILAPILSCL*SLLLGR
Trigger: ACGACCTAAAAGCAATGACAACAGGCAGGAGAGAAT...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTGTTGCACCTTGATTTaGCCTTATCTCGCCAACTCT +
Preference number: 3 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLCCTLI*PYLANS
Trigger: AGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGTGTTGCACCTTGATTTaGCCTTATCTCGCCAACTCT +
Preference number: 3 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQCCTLI*PYLANS
Trigger: AGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACA...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGGAGGAACTTCGTATTaGGGGATTAGCATCATCTTC +
Preference number: 3 (lower is better)
Translates to: GAKINSPWQWDKMLILAPGGTSY*GISIIF
Trigger: GAAGATGATGCTAATCCCCAAATACGAAGTTCCTCC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATATGGATTTGCCATTGTTaGCACGTGGCCCAGGACTTA +
Preference number: 3 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIWICHC*HVAQDL
Trigger: TAAGTCCTGGGCCACGTGCAAACAATGGCAAATCCA...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp TCATTCAACCAGTTTCTGAGTACCTACTATGGGTCATaGTTTCTGCTGAAGAAGCCTGGGTGTGAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: SFNQFLSTYYGS*FLLKKPGCEQQ
Trigger: TTGCTGCTCACACCCAGGCTTCTTCAGCAGAAAGCATGACCCATAGTAGGTACTCAGAAACTGGTTGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp TTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTaGCTCTCCCACTCTCCTAGTATAGCAGATGGAGTG +
Preference number: 3 (lower is better)
Translates to: FSQALYMDSKML*LSHSPSIADGV
Trigger: CACTCCATCTGCTATACTAGGAGAGTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp CACTGCTCTTACATCTCTTTTCCCAGGCACTTTACATaGACTCCAAAATGCTTTGGCTCTCCCACTCTCCTA +
Preference number: 3 (lower is better)
Translates to: HCSYISFPRHFT*TPKCFGSPTLL
Trigger: TAGGAGAGTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATGTAAGAGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp TTTATCAAAGAACAGAGGCAAGAGCAAGACAGATCATaGGGGTATGAATCCAGGAGGTCATCAACAGCCTCG +
Preference number: 3 (lower is better)
Translates to: FIKEQRQEQDRS*GYESRRSSTAS
Trigger: CGAGGCTGTTGATGACCTCCTGGATTCATACCCCCATGATCTGTCTTGCTCTTGCCTCTGTTCTTTGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp AGAGGGCCCTGTGTTCTCAAGTTCAGCTCCAAATGCTaGTTTATTCCGTCAGAGTACTCACTCAGTAAACGT +
Preference number: 3 (lower is better)
Translates to: RGPCVLKFSSKC*FIPSEYSLSKR
Trigger: ACGTTTACTGAGTGAGTACTCTGACGGAATAAACCAGCATTTGGAGCTGAACTTGAGAACACAGGGCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAGCTATATTGGACTTTaGTTAGGTAAAGGGCTTCTC +
Preference number: 3 (lower is better)
Translates to: SLKISGQSPGALQKKIGDSYIGL*LGKGLL
Trigger: GAGAAGCCCTTTACCTAACAAAAGTCCAATATAGCT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACCAATCAAAGCTGCCTTaGTCAGATAACCTGAAAACC +
Preference number: 3 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHQSKLP*SDNLKT
Trigger: GGTTTTCAGGTTATCTGACAAAGGCAGCTTTGATTG...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGCTGGTCCACAGTTTATaGATTCAAGTACATCGTGCA +
Preference number: 3 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLLVHSL*IQVHRA
Trigger: TGCACGATGTACTTGAATCAATAAACTGTGGACCAG...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGCTTTTAGGTCGTTCTaGAAAAGATGGGTGTCACAT +
Preference number: 3 (lower is better)
Translates to: GAKINSPWQWDKMLILAPAFRSF*KRWVSH
Trigger: ATGTGACACCCATCTTTTCAAGAACGACCTAAAAGC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGTCAGCATCCTGTGCTaGAGGCAGATTAAAATCTCA +
Preference number: 3 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCVSILC*RQIKIS
Trigger: TGAGATTTTAATCTGCCTCAAGCACAGGATGCTGAC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp TCTTCCTACTTCACTCTAGTCTTAGGATCTGTGTTATaGTTGCAGGTGTCAGGGGTCAATGTGCACATTCGA +
Preference number: 3 (lower is better)
Translates to: SSYFTLVLGSVL*LQVSGVNVHIR
Trigger: TCGAATGTGCACATTGACCCCTGACACCTGCAAGCATAACACAGATCCTAAGACTAGAGTGAAGTAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp TGTAAAGAGAATACAGCGTCTCCGAAGGACATGAAATaGAAGGATTCTGCCAATCTGGAAGGGATGGGTGTT +
Preference number: 3 (lower is better)
Translates to: CKENTASPKDMK*KDSANLEGMGV
Trigger: AACACCCATCCCTTCCAGATTGGCAGAATCCTTCCATTTCATGTCCTTCGGAGACGCTGTATTCTCTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp CATCAGAAATGCCCAATGACAGACCACAGCCAAATATaGCAGGGCAAACTGATTTGGTTCTGCGATTTCCAT +
Preference number: 3 (lower is better)
Translates to: HQKCPMTDHSQI*QGKLIWFCDFH
Trigger: ATGGAAATCGCAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCATTTCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCAAACACAGCCCCAGTTaGCTTTACAGCCCAAGTTAC +
Preference number: 3 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISKHSPS*LYSPSY
Trigger: GTAACTTGGGCTGTAAAGCAAACTGGGGCTGTGTTT...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTCCCCACTCTCTATTTaGACGAAAAGACAGATACTA +
Preference number: 3 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLSPLSI*TKRQIL
Trigger: TAGTATCTGTCTTTTCGTCAAAATAGAGAGTGGGGA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAAACCAAGGTACTGGATaGTGTCATGACAAGTGTGTC +
Preference number: 3 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHINQGTG*CHDKCV
Trigger: GACACACTTGTCATGACACAATCCAGTACCTTGGTT...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTAGTAGCGAATCATTTTaGCTTTTAAGCACGCCAAGA +
Preference number: 3 (lower is better)
Translates to: GAKINSPWQWDKMLILAPSSESF*LLSTPR
Trigger: TCTTGGCGTGCTTAAAAGCAAAAATGATTCGCTACT...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp GCATGGCTAGATGTAATCAGGGAGTCACGGTCTGCATaGACCCTAGTTACTGTTTGGTTTCATCAAAATCAA +
Preference number: 3 (lower is better)
Translates to: AWLDVIRESRSA*TLVTVWFHQNQ
Trigger: TTGATTTTGATGAAACCAAACAGTAACTAGGGTCCATGCAGACCGTGACTCCCTGATTACATCTAGCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTTCTCAGAGTCTGCTTTaGATGAGCTGTATTTGTGAA +
Preference number: 3 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCSQSLL*MSCICE
Trigger: TTCACAAATACAGCTCATCAAAAGCAGACTCTGAGA...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAAATCTCTCTAACGTGTaGTCCCTGAACAAGATGCTT +
Preference number: 3 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHINLSNV*SLNKML
Trigger: AAGCATCTTGTTCAGGGACAACACGTTAGAGAGATT...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATACTTGCTTGGCTTGCTTaGATAAGAATCTCTCTAACG +
Preference number: 3 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHILAWLA*IRISLT
Trigger: CGTTAGAGAGATTCTTATCAAAGCAAGCCAAGCAAG...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGAATTCCTTCTCTATATaGTGTGCTTCTTCCTTCATG +
Preference number: 3 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQNSFSI*CASSFM
Trigger: CATGAAGGAAGAAGCACACAATATAGAGAAGGAATT...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp GGAATCTCCTCCTCTTTACTTAATGTTGGAGAAAAGTaGCCACCAGTACTCGATCATTGTAGATTCGGAATC +
Preference number: 3 (lower is better)
Translates to: GISSSLLNVGEK*PPVLDHCRFGI
Trigger: GATTCCGAATCTACAATGATCGAGTACTGGTGGCCACTTTTCTCCAACATTAAGTAAAGAGGAGGAGATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAAGTAGCGAATCATTTTaGCTTTTAAGCACGCCAAGA +
Preference number: 3 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHISSESF*LLSTPR
Trigger: TCTTGGCGTGCTTAAAAGCAAAAATGATTCGCTACT...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGACCCTAGTTACTGTTaGGTTTCATCAAAATCAACT +
Preference number: 3 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCDPSYC*VSSKST
Trigger: AGTTGATTTTGATGAAACCAAACAGTAACTAGGGTC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp GAATACGATGCCAATAGGCCAGTTCTTGCTACCGTATaGCAGAATAAAGCCCTTAAATGTCAAGGCTTTTCA +
Preference number: 3 (lower is better)
Translates to: EYDANRPVLATV*QNKALKCQGFS
Trigger: TGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAACTGGCCTATTGGCATCGTATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp TCGTTCTTGAAAAGATGGGTGTCACATAGTCTGATGTaGTTTATCAAAGAACAGAGGCAAGAGCAAGACAGA +
Preference number: 3 (lower is better)
Translates to: SFLKRWVSHSLM*FIKEQRQEQDR
Trigger: TCTGTCTTGCTCTTGCCTCTGTTCTTTGATAAAGCACATCAGACTATGTGACACCCATCTTTTCAAGAACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp CAAACTAAGATCACACTGAATGGCGGAAACCTTGCTTaGCTTGCTTTGATAAGAATCTCTCTAACGTGTTGT +
Preference number: 3 (lower is better)
Translates to: QTKITLNGGNLA*LALIRISLTCC
Trigger: ACAACACGTTAGAGAGATTCTTATCAAAGCAAGCCAAGCAAGGTTTCCGCCATTCAGTGTGATCTTAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCATCAGGGATTGAGGTATaGAATCGGCACACTCATTCC +
Preference number: 3 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSSGIEV*NRHTHS
Trigger: GGAATGAGTGTGCCGATTCAATACCTCAATCCCTGA...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTAACCAAGGTACTGGATaGTGTCATGACAAGTGTGTC +
Preference number: 3 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCNQGTG*CHDKCV
Trigger: GACACACTTGTCATGACACAATCCAGTACCTTGGTT...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCACCACAAAGCCCACTCTaGGTAAGAATCTTCTTTGTG +
Preference number: 3 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSPQSPL*VRIFFV
Trigger: CACAAAGAAGATTCTTACCAAGAGTGGGCTTTGTGG...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCAATCAAAGCTGCCTTaGTCAGATAACCTGAAAACC +
Preference number: 3 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCQSKLP*SDNLKT
Trigger: GGTTTTCAGGTTATCTGACAAAGGCAGCTTTGATTG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp TGTAATTTATATATTGCCTACCCATGCATTCTTCAATaGAGGCTGCCCTTGTTAGCGCTGAAACTCCCATTT +
Preference number: 3 (lower is better)
Translates to: CNLYIAYPCILQ*RLPLLALKLPF
Trigger: AAATGGGAGTTTCAGCGCTAACAAGGGCAGCCTTCATTGAAGAATGCATGGGTAGGCAATATATAAATTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR TCA 72 bp CTTTTAAGCACGCCAAGAAGAAGTGAGACAGGTAAATaGTTTAACTTATTGTGCTCCAGTTCTGGGGCAAAT +
Preference number: 3 (lower is better)
Translates to: LLSTPRRSETGK*FNLLCSSSGAN
Trigger: ATTTGCCCCAGAACTGGAGCACAATAAGTTAAATCATTTACCTGTCTCACTTCTTCTTGGCGTGCTTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp ATGATCATCATCATCATCGAAAACACAGCCCCAGTTTaGTTTACAGCCCAAGTTACAAACTGTCCCTTTAAA +
Preference number: 3 (lower is better)
Translates to: MIIIIIENTAPV*FTAQVTNCPFK
Trigger: TTTAAAGGGACAGTTTGTAACTTGGGCTGTAAAGCAAACTGGGGCTGTGTTTTCGATGATGATGATGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTTCTCAGAGTCTGCTTTaGATGAGCTGTATTTGTGAA +
Preference number: 3 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCSQSLL*MSCICE
Trigger: TTCACAAATACAGCTCATCAAAAGCAGACTCTGAGA...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCACTGGTCCACAGTTTATaGATTCAAGTACATCGTGCA +
Preference number: 3 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSLVHSL*IQVHRA
Trigger: TGCACGATGTACTTGAATCAATAAACTGTGGACCAG...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp CTGAGAAAAGAATTCGCTAATTATATAAACTCCCACTaGTCTTACATCTCTTTTCCCAGGCACTTTACATGG +
Preference number: 3 (lower is better)
Translates to: LRKEFANYINSH*SYISFPRHFTW
Trigger: CCATGTAAAGTGCCTGGGAAAAGAGATGTAAGAGCAGTGGGAGTTTATATAATTAGCGAATTCTTTTCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp GTTGAATGGAACTGTTTCTCAACTGAGCTCCTAAACTaGAATTTCAGCTATACAAGAGAACAGGAAACAGAT +
Preference number: 3 (lower is better)
Translates to: VEWNCFSTELLN*NFSYTREQETD
Trigger: ATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGTTTAGGAGCTCAGTTGAGAAACAGTTCCATTCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CCA 72 bp CCTGTTGTCATTGCTTTTAGGTCGTTCTTGAAAAGATaGGTGTCACATAGTCTGATGTGCTTTATCAAAGAA +
Preference number: 3 (lower is better)
Translates to: PVVIAFRSFLKR*VSHSLMCFIKE
Trigger: TTCTTTGATAAAGCACATCAGACTATGTGACACCCATCTTTTCAAGAACGACCTAAAAGCAATGACAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAAGCTATATTGGACTTTaGTTAGGTAAAGGGCTTCTC +
Preference number: 3 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSSYIGL*LGKGLL
Trigger: GAGAAGCCCTTTACCTAACAAAAGTCCAATATAGCT...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR-3UTR CAA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAAGAAAAATGAGATATTaGTTGGTGACAGATGAGGCT +
Preference number: 3 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSRKMRY*LVTDEA
Trigger: AGCCTCATCTGTCACCAACAAATATCTCATTTTTCT...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR GCA 72 bp AAATATACTTTTAACACCAATAGAGCTGAAAGACTATaGCTTTATCTTGGATTTCATAGATTTCCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: KYTFNTNRAERL*LYLGFHRFPLP
Trigger: GGGAAGGGGAAATCTATGAAATCCAAGATAAAGGCATAGTCTTTCAGCTCTATTGGTGTTAAAAGTATATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
CDS-3UTR CCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGTGCCGGTGCTGGGCTTaGCAGCTGCCCTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWECRCWA*QLPWSK
Trigger: TTTGCTCCAGGGCAGCTGCCAAGCCCAGCACCGGCA...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGCCGCCGCTGGGTCTTaGCGAGGGAGCTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGAAAGS*RGSSAC
Trigger: GCACGCTGAGCTCCCTCGGCAAGACCCAGCGGCGGC...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGGCCGCCGCTGGGTCTTaGCGAGGGAGCTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSAAAGS*RGSSAC
Trigger: GCACGCTGAGCTCCCTCGGCAAGACCCAGCGGCGGC...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGCAGGGTACCTTCACCTaGACTGCCACAGTCACCCGG +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEQGTFT*TATVTR
Trigger: CCGGGTGACTGTGGCAGTGCAGGTGAAGGTACCCTG...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACAGGTCCGACCCAACCTaGACTCAACCGACCGCGTCC +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNRSDPT*TQPTAS
Trigger: GGACGCGGTCGGTTGAGTCCAGGTTGGGTCGGACCT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355422.11
CDS-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAAGGAAACTCCGGGTCTaGCAGCAGCCACCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRRKLRV*QQPPPP
Trigger: CGGCGGCGGTGGCTGCTGCCAGACCCGGAGTTTCCT...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAATCCCGAGCCGCCGCTaGGTCTTGCCGAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLIPSRR*VLPREL
Trigger: GAGCTCCCTCGGCAAGACCCAGCGGCGGCTCGGGAT...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTATCCCGAGCCGCCGCTaGGTCTTGCCGAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGIPSRR*VLPREL
Trigger: GAGCTCCCTCGGCAAGACCCAGCGGCGGCTCGGGAT...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATGGGTCGCCAGGAACATaGTGCCGGCGCGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDGSPGT*CRRGAG
Trigger: ACCAGCCCCGCGCCGGCACCATGTTCCTGGCGACCC...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGCTGTACTGGGAAGGCTaGCTGCCACACGGTCACATC +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWELYWEG*LPHGHI
Trigger: GATGTGACCGTGTGGCAGCCAGCCTTCCCAGTACAG...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGAGTCTACCCCCGTTTTaGGCTCTGTCCTTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWESLPPF*ALSFLA
Trigger: CGCCAGGAAGGACAGAGCCCAAAACGGGGGTAGACT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGCAGCCATGTGGGAGTaGCCCCAGGAGAATGCTCCG +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRAAMWE*PQENAP
Trigger: CGGAGCATTCTCCTGGGGTCACTCCCACATGGCTGC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGTCTTCATACCCCGCTTaGAGCGGCAGTTGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWESSYPA*SGSCRA
Trigger: CGCTCTACAACTGCCGCTGCAAGCGGGGTATGAAGA...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTACTCAGGTGGGCCTTCTaGTGTCACTGTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLLRWAF*CHCAQA
Trigger: GGCCTGGGCACAGTGACAGCAGAAGGCCCACCTGAG...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGAGCCGAAGTCGCAGCTaGGCTGGTCAAATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWESRSRS*AGQMSL
Trigger: CAAGCTCATTTGACCAGCGCAGCTGCGACTTCGGCT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGATGGTGGTGCACGGGGTaGTGTACGCCGACCTGTACT +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRWWCTG*CTPTCT
Trigger: AGTACAGGTCGGCGTACATCACCCCGTGCACCACCA...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACGCCCTGTCCGGTGTTTaGGGAACTCGAAGACACAAC +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNALSGV*GTRRHN
Trigger: GTTGTGTCTTCGAGTTCCTCAAACACCGGACAGGGC...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTACCTTCCTGGCGGATGTaGGCCTGTTGGGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLPSWRM*ACWERC
Trigger: GCATCTCTCCCAACAGGCTCACATCCGCCAGGAAGG...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGCCCGGACAGCTGTGCTaGTCTGGCCGCCCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEPGQLC*SGRPKF
Trigger: GAACTTTGGGCGGCCAGAGCAGCACAGCTGTCCGGG...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGGCACTTGCGGCGGTTaGAGACATCGTTGGACACGC +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRGTCGG*RHRWTR
Trigger: GCGTGTCCAACGATGTCTGCAACCGCCGCAAGTGCC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGGTCGCCTCCGCTCTGTaGAGGCGATGTCCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQVASAL*RRCPGR
Trigger: CCTGCCGGGACATCGCCTGCACAGAGCGGAGGCGAC...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAACTGGGAAGGCTGGCTaGCACACGGTCACATCGGAG +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLTGKAG*HTVTSE
Trigger: CTCCGATGTGACCGTGTGGCAGCCAGCCTTCCCAGT...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGCAGGGAGTCACGGTCTaGATGGACCCTAGTTACTGT +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEQGVTV*MDPSYC
Trigger: ACAGTAACTAGGGTCCATGCAGACCGTGACTCCCTG...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGAGGAAACTCCGGGTCTaGCAGCAGCCACCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDERKLRV*QQPPPP
Trigger: CGGCGGCGGTGGCTGCTGCCAGACCCGGAGTTTCCT...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGGGTCGCCAGGAACATaGTGCCGGCGCGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCGSPGT*CRRGAG
Trigger: ACCAGCCCCGCGCCGGCACCATGTTCCTGGCGACCC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTTGCGGCACTCATCCTTaGCCTCCAGGCCGGATGCCA +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGCGTHP*PPGRMP
Trigger: TGGCATCCGGCCTGGAGGCCAAGGATGAGTGCCGCA...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACAGGGTCCTGTTCTGCTaGTCTGTGCCAAGCAACTCA +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNRVLFC*SVPSNS
Trigger: TGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGACCAAATCAAAGGCTaGGGCAGCTCTGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGDQIKG*GSSGGA
Trigger: GGCTCCCCCAGAGCTGCCTCAGCCTTTGATTTGGTC...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGCCTTCCTGGCGGATGTaGGCCTGTTGGGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEPSWRM*ACWERC
Trigger: GCATCTCTCCCAACAGGCTCACATCCGCCAGGAAGG...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGATCCCCGGACAGCTGTaGTGCTCTGGCCGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRIPGQL*CSGRPK
Trigger: CTTTGGGCGGCCAGAGCAGCACAGCTGTCCGGGGAT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTCGAGGGAGCTCAGCGTaGAGCGATCCCCGGACAGCT +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPRGSSA*SDPRTA
Trigger: AGCTGTCCGGGGATCGCTGCACGCTGAGCTCCCTCG...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTATGCGGTACTTGGTGCTaGAGCTCTGCTCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLCGTWC*SSAPSG
Trigger: GCCTGAAGGAGCAGAGCTGCAGCACCAAGTACCGCA...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTCGCACTGCCTTAGCGTaGGGTACTTGGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGRTALA*GTWCCS
Trigger: GCTGCAGCACCAAGTACCGCACGCTAAGGCAGTGCG...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGTTGCCCGCCACGCACTaGCTTAGCGTGCGGTACTTG +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHELPATH*LSVRYL
Trigger: CAAGTACCGCACGCTAAGGCAGTGCGTGGCGGGCAA...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGGCACTTGCGGCGGTTaGAGACATCGTTGGACACGC +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGGTCGG*RHRWTR
Trigger: GCGTGTCCAACGATGTCTGCAACCGCCGCAAGTGCC...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGTTAGCAAAGCCAGATaGCTTATCACCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEVSKAR*LITRVL
Trigger: CAGGACCCTGGTGATAAGGCATCTGGCTTTGCTAAC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATGCCCAGAGGAGTGGCTaGCCAAGTGCTCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDAQRSG*PSAQRW
Trigger: CCACCTCTGAGCACTTGGGCAGCCACTCCTCTGGGC...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGGTTGCAGACATCGTTaGACACGCTGGTGGTGCACG +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRGCRHR*TRWWCT
Trigger: CGTGCACCACCAGCGTGTCCAACGATGTCTGCAACC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGCACCAGGACCAGCAGTaGGCTCAGACCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEHQDQQ*AQTTAW
Trigger: CCAAGCTGTGGTCTGAGCCCACTGCTGGTCCTGGTG...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAAACCCCTGTCTTCAGTaGCACCCCAAATGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLNPCLQ*HPKCPD
Trigger: GTCCGGGCATTTGGGGTGCCACTGAAGACAGGGGTT...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGAGCAAGACAGATCATaGGGGTATGAATCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEEQDRS*GYESRR
Trigger: CCTCCTGGATTCATACCCCCATGATCTGTCTTGCTC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
3UTR CAA 72 bp TTTTGGGCTCTGTCCTTCCTGGCGGATGTGAGCCTGTaGGGAGAGATGCTAGTTTCTCGCCTCTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FWALSFLADVSL*GEMLVSRLSAG
Trigger: TCCTGCTGAGAGGCGAGAAACTAGCATCTCTCCCAACAGGCTCACATCCGCCAGGAAGGACAGAGCCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
CDS-3UTR TCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACCTAACGTGTTGTCCCTaGACAAGATGCTTCCCCCTA +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNLTCCP*TRCFPL
Trigger: TAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAG...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACTGCTTCTCAGGATACTaGTGGAGAAGTTGTCACCCC +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNCFSGY*WRSCHP
Trigger: GGGGTGACAACTTCTCCATCAGTATCCTGAGAAGCA...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACTCCTTTGAGCACTGCTaGCTGTTTGCTTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNSFEHC*LFAFLS
Trigger: GCTGAGGAAAGCAAACAGTCAGCAGTGCTCAAAGGA...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGCCCGGACAGCTGTGCTaGTCTGGCCGCCCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDEPGQLC*SGRPKF
Trigger: GAACTTTGGGCGGCCAGAGCAGCACAGCTGTCCGGG...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGGCCTCCAGGCCGGATaGCAGGCTGAAGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPGLQAG*QAEVGL
Trigger: GAGACCAACTTCAGCCTGGCATCCGGCCTGGAGGCC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGGGCCTCCATGGCGCTaGGGCACTCATCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCGPPWR*GTHPWP
Trigger: AGGCCAAGGATGAGTGCCGCAGCGCCATGGAGGCCC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGACTGGGAAGGCTGGCTaGCACACGGTCACATCGGAG +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRTGKAG*HTVTSE
Trigger: CTCCGATGTGACCGTGTGGCAGCCAGCCTTCCCAGT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGCCCAGAGGAGTGGCTaGCCAAGTGCTCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHAQRSG*PSAQRW
Trigger: CCACCTCTGAGCACTTGGGCAGCCACTCCTCTGGGC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGACTTCCCCGCCGCTGTaGCTACCTGGCCAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRTSPPL*LPGQAH
Trigger: ATGAGCTTGGCCAGGTAGGCACAGCGGCGGGGAAGT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGATCTGTGTTATGCTTaGAGGTGTCAGGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEDLCYA*RCQGSM
Trigger: CATTGACCCCTGACACCTGCAAGCATAACACAGATC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGACAGCTGTGCTGCTCTaGCCGCCCAAAGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSTAVLL*PPKVQL
Trigger: GAGCTGAACTTTGGGCGGCCAGAGCAGCACAGCTGT...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTGCGGCACTCATCCTTaGCCTCCAGGCCGGATGCCA +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLCGTHP*PPGRMP
Trigger: TGGCATCCGGCCTGGAGGCCAAGGATGAGTGCCGCA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAGCACACAGGCACGATaGTCTGTCGCCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDSTQAR*SVASAL
Trigger: CAGAGCGGAGGCGACAGACCATCGTGCCTGTGTGCT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGGCTGCAGTCACACCATaGGGCCACACTGAGGCTACT +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSAAVTP*GHTEAT
Trigger: AGTAGCCTCAGTGTGGCCCCATGGTGTGACTGCAGC...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATCACCAGGACCAGCAGTaGGCTCAGACCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDHQDQQ*AQTTAW
Trigger: CCAAGCTGTGGTCTGAGCCCACTGCTGGTCCTGGTG...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGCAGAGGAGAGTTAGCTaGAGGAACTTCGTATTTGGG +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEQRRVS*RNFVFG
Trigger: CCCAAATACGAAGTTCCTCCAGCTAACTCTCCTCTG...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTAGTCTACCCCCGTTTTaGGCTCTGTCCTTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGSLPPF*ALSFLA
Trigger: CGCCAGGAAGGACAGAGCCCAAAACGGGGGTAGACT...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGACTGGGATCGGGGGAGTaGTCTACCTTTCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRLGSGE*STFLVS
Trigger: GCTGACAAGAAAGGTAGACCACTCCCCCGATCCCAG...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCAGCCGCTGTGCCTACCTaGCCAAGCTCATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSAAVPT*PSSWPS
Trigger: AGAGGGCCATGAGCTTGGCCAGGTAGGCACAGCGGC...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGCCGCTGTGCCTACCTaGCCAAGCTCATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPAAVPT*PSSWPS
Trigger: AGAGGGCCATGAGCTTGGCCAGGTAGGCACAGCGGC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGACACACAATATAACATaGAGACCCGCCCGAAGCCTA +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWETHNIT*RPARSL
Trigger: TAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
3UTR CAA 72 bp CACCCTTGGAACATGGCCCACTGTTGCACCTTGATTTaGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HPWNMAHCCTLI*PYLANSPSSGG
Trigger: CCCACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTCCAAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 72 bp CTAACTGGCGAATTTCCCACAAAGTCTACCCCCGTTTaGGGCTCTGTCCTTCCTGGCGGATGTGAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LTGEFPTKSTPV*GSVLPGGCEPV
Trigger: AACAGGCTCACATCCGCCAGGAAGGACAGAGCCCAAAACGGGGGTAGACTTTGTGGGAAATTCGCCAGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
CDS-3UTR TCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTTGGTGGTGCACGGGGTaGTGTACGCCGACCTGTACT +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPWWCTG*CTPTCT
Trigger: AGTACAGGTCGGCGTACATCACCCCGTGCACCACCA...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGCTGCTGACAGACCTTaGCTCTGGCTGGCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRAADRP*LWLAVG
Trigger: ACCAACTGCCAGCCAGAGTCAAGGTCTGTCAGCAGC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTACCATGGGGCCACACTaGGGCTACTGGAGTCTATGT +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTTMGPH*GYWSLC
Trigger: ACATAGACTCCAGTAGCCTCAGTGTGGCCCCATGGT...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGACCAAATCAAAGGCTaGGGCAGCTCTGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHDQIKG*GSSGGA
Trigger: GGCTCCCCCAGAGCTGCCTCAGCCTTTGATTTGGTC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAGATTCCTGGCAAGGATaGGACCATCCCCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLDSWQG*DHPQSQ
Trigger: TTGGGATTGGGGATGGTCTCATCCTTGCCAGGAATC...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGCGCACTGCCTTAGCGTaGGGTACTTGGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLRTALA*GTWCCS
Trigger: GCTGCAGCACCAAGTACCGCACGCTAAGGCAGTGCG...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACACATGCTCCAGTAAATaGGCAGGCAGTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNTCSSK*AGSSSP
Trigger: AGGAGAAGAACTGCCTGCGCATTTACTGGAGCATGT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGTTGCAGGCCTTCGCTaGATCCAGGCAGTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRVAGLR*IQAVVP
Trigger: GGGAACAACTGCCTGGATGCAGCGAAGGCCTGCAAC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAAAATGTCGTCGAGGTTaGAGGCCTTCGCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRKCRRG*RPSLHP
Trigger: TGGATGCAGCGAAGGCCTGCAACCTCGACGACATTT...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTATTCCCTCCACAGGTATaGACGCTTGCACTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLFPPQV*TLALRA
Trigger: TGCTCGAAGTGCAAGCGTGCATACCTGTGGAGGGAA...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACTCTTCTAACATGGTCTaGAGTCTGTCACGGAGGACA +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNSSNMV*SLSRRT
Trigger: TGTCCTCCGTGACAGACTGCAGACCATGTTAGAAGA...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACTGTTCTGCTGATCTGTaGCAAGCAACTCATCTCACC +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNCSADL*QATHLT
Trigger: GGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACA...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGCTGGGCTTGGCAGCTaGCCTGGAGCAAAAATTAAC +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRAGLGS*PGAKIN
Trigger: GTTAATTTTTGCTCCAGGGCAGCTGCCAAGCCCAGC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGACTTCCCCGCCGCTGTaGCTACCTGGCCAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDETSPPL*LPGQAH
Trigger: ATGAGCTTGGCCAGGTAGGCACAGCGGCGGGGAAGT...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATTACCTTCACCTGCACTaGCACAGTCACCCGGTCTCG +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNYLHLH*HSHPVS
Trigger: CGAGACCGGGTGACTGTGGCAGTGCAGGTGAAGGTA...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTCAGGGTACCTTCACCTaGACTGCCACAGTCACCCGG +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPQGTFT*TATVTR
Trigger: CCGGGTGACTGTGGCAGTGCAGGTGAAGGTACCCTG...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTTGGCGGAGCCTTATGTaGCAGCGAACTGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTWRSLM*QRTEKV
Trigger: GACCTTCTCAGTTCGCTGGCACATAAGGCTCCGCCA...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAACCCCTGTCTTCAGTaGCACCCCAAATGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDNPCLQ*HPKCPD
Trigger: GTCCGGGCATTTGGGGTGCCACTGAAGACAGGGGTT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAAAGTCGCAGCTGCGCTaGTCAAATGAGCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRKSQLR*SNELGD
Trigger: GTCTCCAAGCTCATTTGACCAGCGCAGCTGCGACTT...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTTGCCGGTGCTGGGCTTaGCAGCTGCCCTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSCRCWA*QLPWSK
Trigger: TTTGCTCCAGGGCAGCTGCCAAGCCCAGCACCGGCA...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATTTTCCCCCACTCCCTTaGGCGAGGGAAGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNFPPLP*AREGRR
Trigger: TCTTCTCCCTTCCCTCGCCCAAGGGAGTGGGGGAAA...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGACAGGGATTGAGGTATTaGATCGGCACACTCATTCCC +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRQGLRY*IGTLIP
Trigger: GGGAATGAGTGTGCCGATTCAATACCTCAATCCCTG...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTACAGTTCTGGGGCAAATaGTGGTGTTTTAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLQFWGK*WCFRVT
Trigger: GGTGACCCTAAAACACCATCATTTGCCCCAGAACTG...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATGCCCTGTCCGGTGTTTaGGGAACTCGAAGACACAAC +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNALSGV*GTRRHN
Trigger: GTTGTGTCTTCGAGTTCCTCAAACACCGGACAGGGC...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACAAACAAATGGTCACTTaGGAAGCAGAGCCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNKQMVT*EAEPCQ
Trigger: TTGACACGGCTCTGCTTCTCAAGTGACCATTTGTTT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGATCCTTTGAGCACTGCTaGCTGTTTGCTTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRSFEHC*LFAFLS
Trigger: GCTGAGGAAAGCAAACAGTCAGCAGTGCTCAAAGGA...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAATCCCCGGACAGCTGTaGTGCTCTGGCCGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIIPGQL*CSGRPK
Trigger: CTTTGGGCGGCCAGAGCAGCACAGCTGTCCGGGGAT...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACTGCGGTACTTGGTGCTaGAGCTCTGCTCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHCGTWC*SSAPSG
Trigger: GCCTGAAGGAGCAGAGCTGCAGCACCAAGTACCGCA...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGGCGTGCGGTACTTGGTaGTGCAGCTCTGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDEACGTW*CSSAPS
Trigger: TGAAGGAGCAGAGCTGCAGCACCAAGTACCGCACGC...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCGGGCCTCCATGGCGCTaGGGCACTCATCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISGPPWR*GTHPWP
Trigger: AGGCCAAGGATGAGTGCCGCAGCGCCATGGAGGCCC...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGTTGCAGGCCTTCGCTaGATCCAGGCAGTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHVAGLR*IQAVVP
Trigger: GGGAACAACTGCCTGGATGCAGCGAAGGCCTGCAAC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGCGTTCCCACTGTTGCTaGAGTCACACCATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDERSHCC*SHTMGP
Trigger: TGGCCCCATGGTGTGACTGCAGCAACAGTGGGAACG...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGGGTCGTTCCCACTGTTaGTGCAGTCACACCATGGGG +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDEGRSHC*CSHTMG
Trigger: CCCCATGGTGTGACTGCAGCAACAGTGGGAACGACC...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATTTCATTCTCAGACCCTaGTGGCCCCAGGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNFILRP*WPQGLV
Trigger: AACAAGCCCCTGGGGCCAGCAGGGTCTGAGAATGAA...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAAGGAGAACCTGCCCATaGCTCCATGTCCCAATCAAA +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRRRTCP*LHVPIK
Trigger: TTTGATTGGGACATGGAGGCATGGGCAGGTTCTCCT...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTCAGGGAGTCACGGTCTaGATGGACCCTAGTTACTGT +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTQGVTV*MDPSYC
Trigger: ACAGTAACTAGGGTCCATGCAGACCGTGACTCCCTG...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATGCTGATATTGGCACCTaGCAGAGGCAGACAGCCGAA +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDADIGT*QRQTAE
Trigger: TTCGGCTGTCTGCCTCTGGCAGGTGCCAATATCAGC...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAGGATTTGCCATTGTTTaGACGTGGCCCAGGACTTAC +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLGFAIV*TWPRTY
Trigger: GTAAGTCCTGGGCCACGTGCAAACAATGGCAAATCC...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACTGTCAGGGGTCAATGTaGACATTCGAAGTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNCQGSM*TFEVLL
Trigger: GAGCAAAACTTCGAATGTGCACATTGACCCCTGACA...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTTACCTTCACCTGCACTaGCACAGTCACCCGGTCTCG +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPYLHLH*HSHPVS
Trigger: CGAGACCGGGTGACTGTGGCAGTGCAGGTGAAGGTA...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGACAGCTGTGCTGCTCTaGCCGCCCAAAGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDETAVLL*PPKVQL
Trigger: GAGCTGAACTTTGGGCGGCCAGAGCAGCACAGCTGT...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGGGTTGCAGACATCGTTaGACACGCTGGTGGTGCACG +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQGCRHR*TRWWCT
Trigger: CGTGCACCACCAGCGTGTCCAACGATGTCTGCAACC...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTAGCACACAGGCACGATaGTCTGTCGCCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSSTQAR*SVASAL
Trigger: CAGAGCGGAGGCGACAGACCATCGTGCCTGTGTGCT...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGGCTGCAGTCACACCATaGGGCCACACTGAGGCTACT +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQAAVTP*GHTEAT
Trigger: AGTAGCCTCAGTGTGGCCCCATGGTGTGACTGCAGC...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCAAGTGGTGGTCTGTACTaGGAAGGCTGGCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSSGGLY*EGWLPH
Trigger: GTGTGGCAGCCAGCCTTCCCAGTACAGACCACCACT...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGAGTGGTGGTCTGTACTaGGAAGGCTGGCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQSGGLY*EGWLPH
Trigger: GTGTGGCAGCCAGCCTTCCCAGTACAGACCACCACT...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATCCTTCTCCACCCCTCTaGGCTGGGTCTCAGAACAAT +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNPSPPL*AGSQNN
Trigger: ATTGTTCTGAGACCCAGCCCAGAGGGGTGGAGAAGG...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTAAGTCGCAGCTGCGCTaGTCAAATGAGCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTKSQLR*SNELGD
Trigger: GTCTCCAAGCTCATTTGACCAGCGCAGCTGCGACTT...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAGAAGTTGTCACCCCTaGGGTTTGTCTGGGATCGGG +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDRSCHP*GLSGIG
Trigger: CCCGATCCCAGACAAACCCCAGGGGTGACAACTTCT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCATTCCCACCTGCACCATaGCCGGTACCTGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSFPPAP*PVPDSC
Trigger: ACAGCTGTCAGGTACCGGCCATGGTGCAGGTGGGAA...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTACAGCTAAAGCAGCTCTaGCATCTCCTATTCCCACCT +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLQLKQL*HLLFPP
Trigger: AGGTGGGAATAGGAGATGCCAGAGCTGCTTTAGCTG...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTCGCCCGAAGCCTAACTaGAGGCTTCTCAACAAAGCT +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTRPKPN*RLLNKA
Trigger: AGCTTTGTTGAGAAGCCTCCAGTTAGGCTTCGGGCG...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGTGCTCCGGTGTCCTCTaGAAAGCAGATACACAGGAC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHECSGVL*KADTQD
Trigger: GTCCTGTGTATCTGCTTTCCAGAGGACACCGGAGCA...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATCCTTTAGACAGCTGCTaGCAGACCTTGACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNPLDSC*QTLTLA
Trigger: AGCCAGAGTCAAGGTCTGTCAGCAGCTGTCTAAAGG...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGACCATGGGGCCACACTaGGGCTACTGGAGTCTATGT +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLTMGPH*GYWSLC
Trigger: ACATAGACTCCAGTAGCCTCAGTGTGGCCCCATGGT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGTATCCCAAAGCCTTCTaGGTTTGGATGGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEYPKAF*VWMEHC
Trigger: GCAGTGCTCCATCCAAACTCAGAAGGCTTTGGGATA...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGGTGTCGTTCAGGGATTaGGGTATTGAATCGGCACAC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEVSFRD*GIESAH
Trigger: GTGTGCCGATTCAATACCTCAATCCCTGAACGACAC...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGCCCAAATGCCCGGACTaGAGGACAGGAAGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLPKCPD*RTGSSE
Trigger: TTCGCTACTTCCTGTCCTTCAGTCCGGGCATTTGGG...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGCAGATCATGGGGGTATaGATCCAGGAGGTCATCAAC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEQIMGV*IQEVIN
Trigger: GTTGATGACCTCCTGGATTCATACCCCCATGATCTG...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAAGAAGGTCCCTGTTCTaGTCAGTAAGGAACATCAGC +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRRRSLF*SVRNIS
Trigger: GCTGATGTTCCTTACTGATCAGAACAGGGACCTTCT...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATGGTGGCACATTCTGCTaGAAACCACCCCTGCATTGT +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNGGTFC*KPPLHC
Trigger: ACAATGCAGGGGTGGTTTTCAGCAGAATGTGCCACC...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGTTCTTGCTACCGTATaGCAGAATAAAGCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEVLATV*QNKALK
Trigger: TTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAAC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGCGTCTCCGAAGGACATaGAATGGAAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSRLRRT*NGRILP
Trigger: TGGCAGAATCCTTCCATTTCATGTCCTTCGGAGACG...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTATGTGCCAGCGAACTaGGAAGGTCCAGGGTACCTT +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRYVPAN*EGPGYL
Trigger: AAGGTACCCTGGACCTTCTCAGTTCGCTGGCACATA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGTGTGTGTGTGTGTGTaGCAGAGAGAACCACGCTTT +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTVCVCV*QREPRF
Trigger: AAAGCGTGGTTCTCTCTGTCACACACACACACACAC...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGGTGTGTGTGTGTGTGTaGCAGAGAGAACCACGCTTT +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEVCVCV*QREPRF
Trigger: AAAGCGTGGTTCTCTCTGTCACACACACACACACAC...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGTGCTATAAACCTGCATaGAACAGAACGAACATAAGC +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWECYKPA*NRTNIS
Trigger: GCTTATGTTCGTTCTGTTTCATGCAGGTTTATAGCA...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACAGGAGACTGGGTGTCTaGACCCCTCACTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHRRLGV*TPHSGM
Trigger: CATTCCTGAGTGAGGGGTTCAGACACCCAGTCTCCT...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGAGGAGACTGGGTGTCTaGACCCCTCACTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQRRLGV*TPHSGM
Trigger: CATTCCTGAGTGAGGGGTTCAGACACCCAGTCTCCT...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCATCTTCATACCCCGCTTaGAGCGGCAGTTGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSSSYPA*SGSCRA
Trigger: CGCTCTACAACTGCCGCTGCAAGCGGGGTATGAAGA...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGGCAGGCTCTGGTACATaGTCCAGTAAATGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQAGSGT*SSKCAG
Trigger: GCCTGCGCATTTACTGGAGCATGTACCAGAGCCTGC...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGCAGGCTCTGGTACATaGTCCAGTAAATGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHAGSGT*SSKCAG
Trigger: GCCTGCGCATTTACTGGAGCATGTACCAGAGCCTGC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGAGCAGATCATTTCCCTaGAGGCTCTGGTACATGCTC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHESRSFP*RLWYML
Trigger: GAGCATGTACCAGAGCCTGCAGGGAAATGATCTGCT...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGCCGACCTGTACTTCTTaGAAATGTCGTCGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEPTCTS*KCRRGC
Trigger: GCAACCTCGACGACATTTGCAAGAAGTACAGGTCGG...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGGTCGTTCCCACTGTTaGTGCAGTCACACCATGGGG +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCGRSHC*CSHTMG
Trigger: CCCCATGGTGTGACTGCAGCAACAGTGGGAACGACC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGAAAGAAAGGAGAACCTaGCCATGCCTCCATGTCCCA +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSKERRT*PCLHVP
Trigger: TGGGACATGGAGGCATGGGCAGGTTCTCCTTTCTTT...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGGGATCTGTAGAAATGTaGACCCTGGTTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEGSVEM*TLVSSS
Trigger: GGAGGAGGAAACCAGGGTGCACATTTCTACAGATCC...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCCTCAGGTGGGCCTTCTaGTGTCACTGTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISLRWAF*CHCAQA
Trigger: GGCCTGGGCACAGTGACAGCAGAAGGCCCACCTGAG...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGCTGATATTGGCACCTaGCAGAGGCAGACAGCCGAA +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPADIGT*QRQTAE
Trigger: TTCGGCTGTCTGCCTCTGGCAGGTGCCAATATCAGC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGTGGAAGAGCTGGATTTaGCATTGTTTGCACGTGGCC +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSWKSWI*HCLHVA
Trigger: GGCCACGTGCAAACAATGGCAAATCCAGCTCTTCCA...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTATTCCCGATCAAGCATaGTTGGCACACCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGIPDQA*LAHQEA
Trigger: AGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAAT...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGGTGACCCCAGGAGAATaGTCCGGTGTCCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQVTPGE*SGVLWK
Trigger: TTTCCAGAGGACACCGGAGCATTCTCCTGGGGTCAC...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGTGACCCCAGGAGAATaGTCCGGTGTCCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHVTPGE*SGVLWK
Trigger: TTTCCAGAGGACACCGGAGCATTCTCCTGGGGTCAC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTCAGGCACTGATCACTaGCTTTCACGCAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRSGTDH*LSRNPG
Trigger: GCCTGGATTGCGTGAAAGCCAGTGATCAGTGCCTGA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGTTAGCGTGCGGTACTTaGTGCTGCAGCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDELACGT*CCSSAP
Trigger: AGGAGCAGAGCTGCAGCACCAAGTACCGCACGCTAA...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGGGCAGTTGTTCCCTTTaGGAATGTGCTCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSGSCSL*ECAPLA
Trigger: AGCAAGTGGAGCACATTCCCAAAGGGAACAACTGCC...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355422.11
CDS-3UTR CCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTCTGTACTGGGAAGGCTaGCTGCCACACGGTCACATC +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSLYWEG*LPHGHI
Trigger: GATGTGACCGTGTGGCAGCCAGCCTTCCCAGTACAG...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGACCCAGGCACTTTACATaGACTCCAAAATGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRPRHFT*TPKCFG
Trigger: GCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGG...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACATTACGATGAAGAATTaGGGAGGGCAATACTTAGGC +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNITMKN*GGQYLG
Trigger: GCCTAAGTATTGCCCTCCCCAATTCTTCATCGTAAT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATTCCACCCCTCTGGGCTaGGTCTCAGAACAATCAGAA +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDSTPLG*VSEQSE
Trigger: TTCTGATTGTTCTGAGACCCAGCCCAGAGGGGTGGA...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGAGTCTAAAGATCTCTaGCCAGTCTCCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHESKDL*PVSWRP
Trigger: AGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACTC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGAGGATTCTGCCAATCTaGAAGGGATGGGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHERILPI*KGWVFP
Trigger: GGGAAACACCCATCCCTTCCAGATTGGCAGAATCCT...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGCCATTGTTTGCACGTaGCCCAGGACTTACCCCTGG +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCAIVCT*PRTYPW
Trigger: CCAGGGGTAAGTCCTGGGCCACGTGCAAACAATGGC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGATTTTCAACGGCCCTaGTTCCCTATACTCAGGACA +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRDFQRP*FPILRT
Trigger: TGTCCTGAGTATAGGGAACCAGGGCCGTTGAAAATC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGAGAACTATAAGGCCCTaGATTCAGGTTTCTGAAACT +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWERTIRP*IQVSET
Trigger: AGTTTCAGAAACCTGAATCCAGGGCCTTATAGTTCT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGCGCCCGAAGCCTAACTaGAGGCTTCTCAACAAAGCT +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRRPKPN*RLLNKA
Trigger: AGCTTTGTTGAGAAGCCTCCAGTTAGGCTTCGGGCG...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
3UTR CAA 72 bp TTTGCCTTCTCTATCATGGAAGAGCTGGATTTGCCATaGTTTGCACGTGGCCCAGGACTTACCCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FAFSIMEELDLP*FARGPGLTPGR
Trigger: TCTCCCAGGGGTAAGTCCTGGGCCACGTGCAAACAATGGCAAATCCAGCTCTTCCATGATAGAGAAGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
CDS-3UTR TCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGCCATTGCCAAAGGCTTaGATTGCATTTTTAAGACAT +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEPLPKA*IAFLRH
Trigger: ATGTCTTAAAAATGCAATTCAAGCCTTTGGCAATGG...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATCCCACTGTTGCACCTTaGTTTTGCCTTATCTCGCCA +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNPTVAP*FCLISP
Trigger: TGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGG...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGATTCCTGGCAAGGATaGGACCATCCCCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHDSWQG*DHPQSQ
Trigger: TTGGGATTGGGGATGGTCTCATCCTTGCCAGGAATC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGAGAAAACCTTCTATTaGTGCCGGTGCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHEKTFY*CRCWAW
Trigger: CCAAGCCCAGCACCGGCATCAATAGAAGGTTTTCTC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGAGAAAACCTTCTATTaGTGCCGGTGCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPEKTFY*CRCWAW
Trigger: CCAAGCCCAGCACCGGCATCAATAGAAGGTTTTCTC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATCTTTTAGGCTCAGGATaGAGGTGGGTGTGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNLLGSG*RWVCLP
Trigger: AGGCAAACACACCCACCTTCATCCTGAGCCTAAAAG...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACTATGTGCCAGCGAACTaGGAAGGTCCAGGGTACCTT +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHYVPAN*EGPGYL
Trigger: AAGGTACCCTGGACCTTCTCAGTTCGCTGGCACATA...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGAAGCAAACTCTGCAGTaGAAAGTGTTTCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEKQTLQ*KVFPPL
Trigger: GAGTGGGGGAAACACTTTTCACTGCAGAGTTTGCTT...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTTGCAAAACAGCTATGTaGGGCAGCCATGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPCKTAM*GSHVGV
Trigger: CACTCCCACATGGCTGCCTCACATAGCTGTTTTGCA...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTGCAAAACAGCTATGTaGGGCAGCCATGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLCKTAM*GSHVGV
Trigger: CACTCCCACATGGCTGCCTCACATAGCTGTTTTGCA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCTTGCCCGCCACGCACTaGCTTAGCGTGCGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISLPATH*LSVRYL
Trigger: CAAGTACCGCACGCTAAGGCAGTGCGTGGCGGGCAA...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATACGTTCCCACTGTTGCTaGAGTCACACCATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIRSHCC*SHTMGP
Trigger: TGGCCCCATGGTGTGACTGCAGCAACAGTGGGAACG...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAAAGAAAGGAGAACCTaGCCATGCCTCCATGTCCCA +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDKERRT*PCLHVP
Trigger: TGGGACATGGAGGCATGGGCAGGTTCTCCTTTCTTT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGACCTTCAGACCAAACTaGTCCAAACAGTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHETFRPN*SKQWPR
Trigger: TCTTGGCCACTGTTTGGAGCAGTTTGGTCTGAAGGT...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTAGCCGAAGTCGCAGCTaGGCTGGTCAAATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSSRSRS*AGQMSL
Trigger: CAAGCTCATTTGACCAGCGCAGCTGCGACTTCGGCT...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGCTGGGCTTGGCAGCTaGCCTGGAGCAAAAATTAAC +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHAGLGS*PGAKIN
Trigger: GTTAATTTTTGCTCCAGGGCAGCTGCCAAGCCCAGC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAAAAGCACATCAGAAATaGCCAATGACAGACCACAGC +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRKAHQK*PMTDHS
Trigger: GCTGTGGTCTGTCATTGGGCATTTCTGATGTGCTTT...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGTCAGGCACTGATCACTaGCTTTCACGCAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQSGTDH*LSRNPG
Trigger: GCCTGGATTGCGTGAAAGCCAGTGATCAGTGCCTGA...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGTTAACTGGTTCATATaGGGAATCCTCCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRVNWFI*GILQQI
Trigger: GATCTGCTGGAGGATTCCCCATATGAACCAGTTAAC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTTCCGTAGCTGTGCTTaGCCGGGACCTTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLFRSCA*PGPCQR
Trigger: TCTTTGACAAGGTCCCGGCCAAGCACAGCTACGGAA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGTTCCGTAGCTGTGCTTaGCCGGGACCTTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQFRSCA*PGPCQR
Trigger: TCTTTGACAAGGTCCCGGCCAAGCACAGCTACGGAA...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTATATTGCCCGACACATTaGATTTCAGCTTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLYCPTH*ISASVP
Trigger: AGGCACAGAAGCTGAAATCCAATGTGTCGGGCAATA...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGATATTGCCCGACACATTaGATTTCAGCTTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRYCPTH*ISASVP
Trigger: AGGCACAGAAGCTGAAATCCAATGTGTCGGGCAATA...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGGACTCCAAAATGCTTTaGCTCTCCCACTCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSDSKML*LSHSPS
Trigger: ACTAGGAGAGTGGGAGAGCCAAAGCATTTTGGAGTC...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGAGATCCATTCACCCTTaGAACATGGCCCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRRSIHP*NMAHCC
Trigger: GCAACAGTGGGCCATGTTCCAAGGGTGAATGGATCT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCACTCTGGCCAGTCTCCTaGCGCCCTACAGAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSLWPVS*RPTEEN
Trigger: ATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAG...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGAGGATTCTGCCAATCTaGAAGGGATGGGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRRILPI*KGWVFP
Trigger: GGGAAACACCCATCCCTTCCAGATTGGCAGAATCCT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGCCAAGTGCTCAGAGGTaGCCTTTTAGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDEPSAQR*PFRLRM
Trigger: CATCCTGAGCCTAAAAGGCCACCTCTGAGCACTTGG...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATATTCCCACCTGCACCATaGCCGGTACCTGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIFPPAP*PVPDSC
Trigger: ACAGCTGTCAGGTACCGGCCATGGTGCAGGTGGGAA...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGACCACAGCCAAATATaGCAGGGCAAACTGATTTGG +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTDHSQI*QGKLIW
Trigger: CCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTC...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCTGTTCCGAGGAGACTaGGTGTCTGAACCCCTCACT +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCLFRGD*VSEPLT
Trigger: AGTGAGGGGTTCAGACACCCAGTCTCCTCGGAACAG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTTGCTCCGGTGTCCTCTaGAAAGCAGATACACAGGAC +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPCSGVL*KADTQD
Trigger: GTCCTGTGTATCTGCTTTCCAGAGGACACCGGAGCA...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
3UTR CAA 72 bp TCCATTCACCCTTGGAACATGGCCCACTGTTGCACCTaGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SIHPWNMAHCCT*ILPYLANSPSS
Trigger: TGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTCCAAGGGTGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 72 bp TCTCAGATCCATTCACCCTTGGAACATGGCCCACTGTaGCACCTTGATTTTGCCTTATCTCGCCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: SQIHSPLEHGPL*HLDFALSRQLS
Trigger: GGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 72 bp GACAGACCACAGCCAAATATGGCAGGGCAAACTGATTaGGTTCTGCGATTTCCATTCTCCTCTCCACATCCG +
Preference number: 4 (lower is better)
Translates to: DRPQPNMAGQTD*VLRFPFSSPHP
Trigger: CGGATGTGGAGAGGAGAATGGAAATCGCAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
CDS-3UTR TCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGTGTCGTTCAGGGATTaGGGTATTGAATCGGCACAC +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPVSFRD*GIESAH
Trigger: GTGTGCCGATTCAATACCTCAATCCCTGAACGACAC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCTTCCCAGCACTTTCTaGAGGTGGAATCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCLPSTF*RWNLLL
Trigger: GAGGAGGAGATTCCACCTTCAGAAAGTGCTGGGAAG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCACCATGCATTCTTCAATaGAGGCTGCCCTTGTTAGCG +
Preference number: 4 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSPCILQ*RLPLLA
Trigger: CGCTAACAAGGGCAGCCTTCATTGAAGAATGCATGG...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGCCATGCATTCTTCAATaGAGGCTGCCCTTGTTAGCG +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLPCILQ*RLPLLA
Trigger: CGCTAACAAGGGCAGCCTTCATTGAAGAATGCATGG...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATACCCAAATGCCCGGACTaGAGGACAGGAAGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIPKCPD*RTGSSE
Trigger: TTCGCTACTTCCTGTCCTTCAGTCCGGGCATTTGGG...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTCCCACTGTTGCACCTTaGTTTTGCCTTATCTCGCCA +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPPTVAP*FCLISP
Trigger: TGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGG...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATAGAAGGTCCCTGTTCTaGTCAGTAAGGAACATCAGC +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNRRSLF*SVRNIS
Trigger: GCTGATGTTCCTTACTGATCAGAACAGGGACCTTCT...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATTGGTGGAGGGAGGCCTaGATAATAACGATGAAAGAG +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDWWREA*IITMKE
Trigger: CTCTTTCATCGTTATTATTCAGGCCTCCCTCCACCA...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGACATTCAACCAGTTTCTaGGTACCTACTATGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRHSTSF*VPTMGH
Trigger: ATGACCCATAGTAGGTACTCAGAAACTGGTTGAATG...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAGACTTGGTAAGCATTTaGTGTTGCTTCTCAGGATAC +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLDLVSI*CCFSGY
Trigger: GTATCCTGAGAAGCAACATCAAATGCTTACCAAGTC...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCACGTCTCCGAAGGACATaGAATGGAAGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSRLRRT*NGRILP
Trigger: TGGCAGAATCCTTCCATTTCATGTCCTTCGGAGACG...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATTATGGCAGGGCAAACTaGTTTGGTTCTGCGATTTCC +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDYGRAN*FGSAIS
Trigger: GGAAATCGCAGAACCAAATCAGTTTGCCCTGCCATA...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTATGGCAGGGCAAACTaGTTTGGTTCTGCGATTTCC +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRYGRAN*FGSAIS
Trigger: GGAAATCGCAGAACCAAATCAGTTTGCCCTGCCATA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGAAGCAAACTCTGCAGTaGAAAGTGTTTCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRKQTLQ*KVFPPL
Trigger: GAGTGGGGGAAACACTTTTCACTGCAGAGTTTGCTT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGAGCAGATCATTTCCCTaGAGGCTCTGGTACATGCTC +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLSRSFP*RLWYML
Trigger: GAGCATGTACCAGAGCCTGCAGGGAAATGATCTGCT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTAAATGTCGTCGAGGTTaGAGGCCTTCGCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSKCRRG*RPSLHP
Trigger: TGGATGCAGCGAAGGCCTGCAACCTCGACGACATTT...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTGTCGCCTCCGCTCTGTaGAGGCGATGTCCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSVASAL*RRCPGR
Trigger: CCTGCCGGGACATCGCCTGCACAGAGCGGAGGCGAC...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACAGGAGAACCTGCCCATaGCTCCATGTCCCAATCAAA +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHRRTCP*LHVPIK
Trigger: TTTGATTGGGACATGGAGGCATGGGCAGGTTCTCCT...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGGTTAGCAAAGCCAGATaGCTTATCACCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDEVSKAR*LITRVL
Trigger: CAGGACCCTGGTGATAAGGCATCTGGCTTTGCTAAC...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGAGAGCTGAAAGACTATaGCTTTATCTTGGATTTCAT +
Preference number: 4 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWERAERL*LYLGFH
Trigger: ATGAAATCCAAGATAAAGGCATAGTCTTTCAGCTCT...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATCAGAACAATCAGAAGTaGAGGTGGCACATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDQNNQK*RWHILL
Trigger: CAGCAGAATGTGCCACCTGCACTTCTGATTGTTCTG...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTTCACTTGGATCCCAGTaGTTTTTCAGACCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTSLGSQ*FFRPFL
Trigger: GAGAAAGGGTCTGAAAAAGCACTGGGATCCAAGTGA...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGTGGAAGAGCTGGATTTaGCATTGTTTGCACGTGGCC +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDEWKSWI*HCLHVA
Trigger: GGCCACGTGCAAACAATGGCAAATCCAGCTCTTCCA...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATTTAGGATCTGTGTTATaGTTGCAGGTGTCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNLGSVL*LQVSGV
Trigger: GACCCCTGACACCTGCAAGCATAACACAGATCCTAA...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTGCTTCAGGGCCTCCATaGCGCTGCGGCACTCATCCT +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCASGPP*RCGTHP
Trigger: AGGATGAGTGCCGCAGCGCCATGGAGGCCCTGAAGC...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGCAAATTCAAACAGTTaGGCTTCTCCCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRANSNS*ASPSLH
Trigger: ATGAAGAGAGGGAGAAGCCCAACTGTTTGAATTTGC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAGTGGCAAAACATGAGTaGGAATTTCATTCTCAGACC +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLVAKHE*EFHSQT
Trigger: GGTCTGAGAATGAAATTCCCACTCATGTTTTGCCAC...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGTGGCAAAACATGAGTaGGAATTTCATTCTCAGACC +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRVAKHE*EFHSQT
Trigger: GGTCTGAGAATGAAATTCCCACTCATGTTTTGCCAC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGATTTTGTGGTTATGTaGCTGGAAGCACCGAGACCT +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRDFVVM*LEAPRP
Trigger: AGGTCTCGGTGCTTCCAGCCACATAACCACAAAATC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTCAGCCATTGATTTTGTaGTTATGTGGCTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGQPLIL*LCGWKH
Trigger: GTGCTTCCAGCCACATAACCACAAAATCAATGGCTG...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACACTGAGCTCCTAAACTaGAATTTCAGCTATACAAGA +
Preference number: 4 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNTELLN*NFSYTR
Trigger: TCTTGTATAGCTGAAATTCCAGTTTAGGAGCTCAGT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTCCTTCTGAGTTTGGATaGAGCACTGCATCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGPSEFG*STASGF
Trigger: AAAACCTGATGCAGTGCTCCATCCAAACTCAGAAGG...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTAACTGCTCCAAACAGTaGCCAAGACGTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPNCSKQ*PRRCSQ
Trigger: CTGACTGCAACGTCTTGGCCACTGTTTGGAGCAGTT...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGAACTGCTCCAAACAGTaGCCAAGACGTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDENCSKQ*PRRCSQ
Trigger: CTGACTGCAACGTCTTGGCCACTGTTTGGAGCAGTT...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGGAGTCACGGTCTGCATaGACCCTAGTTACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQESRSA*TLVTVW
Trigger: CCAAACAGTAACTAGGGTCCATGCAGACCGTGACTC...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGAGCAAGACAGATCATaGGGGTATGAATCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHEQDRS*GYESRR
Trigger: CCTCCTGGATTCATACCCCCATGATCTGTCTTGCTC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGAGATCCATTCACCCTTaGAACATGGCCCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDERSIHP*NMAHCC
Trigger: GCAACAGTGGGCCATGTTCCAAGGGTGAATGGATCT...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGGCTCATCAGAGACACTaGGAGCAACAAAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLAHQRH*EQQRDS
Trigger: GGAATCCCTTTGTTGCTCCCAGTGTCTCTGATGAGC...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAACTCCCCATGGCAGTaGGACAAGATGCTGATATTG +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDNSPWQ*DKMLIL
Trigger: CAATATCAGCATCTTGTCCCACTGCCATGGGGAGTT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTAAAATTAACTCCCCATaGCAGTGGGACAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTKINSP*QWDKML
Trigger: CAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTT...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTCCCAGGACTTACCCCTaGGAGACTGAGTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSPRTYP*ETESQF
Trigger: AAACTGAGACTCAGTCTCCCAGGGGTAAGTCCTGGG...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCCAAGTGCTCAGAGGTaGCCTTTTAGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCPSAQR*PFRLRM
Trigger: CATCCTGAGCCTAAAAGGCCACCTCTGAGCACTTGG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGAGAACCACGCTTTATTaGCGGAGCCTTATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDERTTLY*RSLMCQ
Trigger: CTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCT...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTTCTGGGGTGAGAGGATaGCCAAAGGGACTATGTACA +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPSGVRG*PKGLCT
Trigger: TGTACATAGTCCCTTTGGCCATCCTCTCACCCCAGA...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
3UTR CAA 72 bp GAGCTCAGAGGAGAGTTAGCTGGAGGAACTTCGTATTaGGGGATTAGCATCATCTTCAGATCATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ELRGELAGGTSY*GISIIFRSSGS
Trigger: GGAGCCAGATGATCTGAAGATGATGCTAATCCCCAAATACGAAGTTCCTCCAGCTAACTCTCCTCTGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
CDS-3UTR TCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGAAAAACATCTGATATaGATGGGACCACCCGGAATA +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTEKHLI*MGPPGI
Trigger: TATTCCGGGTGGTCCCATTCATATCAGATGTTTTTC...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355422.11
CDS-3UTR TCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGTGGAGGAGCAGCCATTaGTTTTGTGGTTATGTGGCT +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDEWRSSH*FCGYVA
Trigger: AGCCACATAACCACAAAATCAATGGCTGCTCCTCCA...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAGATGAGCTGTATTTGTaGAGTTCATATCAGAGCGAA +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLDELYL*SSYQSE
Trigger: TTCGCTCTGATATGAACTTCACAAATACAGCTCATC...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGTACTGGATTGTGTCATaGCAAGTGTGTCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSYWIVS*QVCQEM
Trigger: CATCTCTTGACACACTTGTCATGACACAATCCAGTA...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTTACTGGATTGTGTCATaGCAAGTGTGTCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTYWIVS*QVCQEM
Trigger: CATCTCTTGACACACTTGTCATGACACAATCCAGTA...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTAAACTAAGATCACACTaGATGGCGGAAACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTKLRSH*MAETLL
Trigger: AAGCAAGGTTTCCGCCATTCAGTGTGATCTTAGTTT...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAAAAAGACAGCTCCTCTaGGGCCACAATTTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLKRQLL*GHNFVN
Trigger: ATTTACAAAATTGTGGCCTCAGAGGAGCTGTCTTTT...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGATGGTCCACAGTTTATTaGTTCAAGTACATCGTGCAT +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRWSTVY*FKYIVH
Trigger: ATGCACGATGTACTTGAATCAATAAACTGTGGACCA...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTCAGATCATGGGGGTATaGATCCAGGAGGTCATCAAC +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSQIMGV*IQEVIN
Trigger: GTTGATGACCTCCTGGATTCATACCCCCATGATCTG...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGTGGTGGAGGGAGGCCTaGATAATAACGATGAAAGAG +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQWWREA*IITMKE
Trigger: CTCTTTCATCGTTATTATTCAGGCCTCCCTCCACCA...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTCAGCATCCTGTGCTTaGGGCAGATTAAAATCTCAG +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRSASCA*GRLKSQ
Trigger: CTGAGATTTTAATCTGCCTCAAGCACAGGATGCTGA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGGACTTGGTAAGCATTTaGTGTTGCTTCTCAGGATAC +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSDLVSI*CCFSGY
Trigger: GTATCCTGAGAAGCAACATCAAATGCTTACCAAGTC...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAGCAGCCATGTGGGAGTaGCCCCAGGAGAATGCTCCG +
Preference number: 4 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSAAMWE*PQENAP
Trigger: CGGAGCATTCTCCTGGGGTCACTCCCACATGGCTGC...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGACATGCTCCAGTAAATaGGCAGGCAGTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLTCSSK*AGSSSP
Trigger: AGGAGAAGAACTGCCTGCGCATTTACTGGAGCATGT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCCGACCTGTACTTCTTaGAAATGTCGTCGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCPTCTS*KCRRGC
Trigger: GCAACCTCGACGACATTTGCAAGAAGTACAGGTCGG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGTCTTGCAGGAGTCCTaGAAATTCAAACAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPVLQES*KFKQLG
Trigger: GCCCAACTGTTTGAATTTGCAGGACTCCTGCAAGAC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACTCTTCTAACATGGTCTaGAGTCTGTCACGGAGGACA +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHSSNMV*SLSRRT
Trigger: TGTCCTCCGTGACAGACTGCAGACCATGTTAGAAGA...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGACATGGACTCCAAAATaGTTTGGCTCTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLTWTPK*FGSPTL
Trigger: GAGAGTGGGAGAGCCAAAGCATTTTGGAGTCCATGT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGAACATGGCCCACTGTTaGACCTTGATTTTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSNMAHC*TLILPY
Trigger: ATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTT...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGCAGGCTGTGGTTCTCTaGAGGCAGTTTATTGGAATA +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRQAVVL*RQFIGI
Trigger: TATTCCAATAAACTGCCTGCAGAGAACCACAGCCTG...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATTCACTTGGATCCCAGTaGTTTTTCAGACCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDSLGSQ*FFRPFL
Trigger: GAGAAAGGGTCTGAAAAAGCACTGGGATCCAAGTGA...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATGAAGGTGGGTGTGTTTaGCTTCTCTATCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNEGGCV*LLYHGR
Trigger: TCTTCCATGATAGAGAAGGCAAACACACCCACCTTC...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGGATCTGTGTTATGCTTaGAGGTGTCAGGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDEDLCYA*RCQGSM
Trigger: CATTGACCCCTGACACCTGCAAGCATAACACAGATC...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATAAAGCACATCAGAAATaGCCAATGACAGACCACAGC +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNKAHQK*PMTDHS
Trigger: GCTGTGGTCTGTCATTGGGCATTTCTGATGTGCTTT...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCTTAGCGTGCGGTACTTaGTGCTGCAGCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISLACGT*CCSSAP
Trigger: AGGAGCAGAGCTGCAGCACCAAGTACCGCACGCTAA...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGCAATCTGCTGTTAACTaGTTCATATGGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEQSAVN*FIWGIL
Trigger: GAGGATTCCCCATATGAACCAGTTAACAGCAGATTG...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTCAATCTGCTGTTAACTaGTTCATATGGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGQSAVN*FIWGIL
Trigger: GAGGATTCCCCATATGAACCAGTTAACAGCAGATTG...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATCAGCCATTGATTTTGTaGTTATGTGGCTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNQPLIL*LCGWKH
Trigger: GTGCTTCCAGCCACATAACCACAAAATCAATGGCTG...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGATGGAAGATGATAAGTaGTTAGCAAAGCCAGATGCC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEMEDDK*LAKPDA
Trigger: GGCATCTGGCTTTGCTAACCACTTATCATCTTCCAT...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGAAATAAGTAGGGCATaGCTAGATGTAATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGEISRA*LDVIRE
Trigger: CTCCCTGATTACATCTAGCCATGCCCTACTTATTTC...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGGAAATAAGTAGGGCATaGCTAGATGTAATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEEISRA*LDVIRE
Trigger: CTCCCTGATTACATCTAGCCATGCCCTACTTATTTC...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGCAGAGGAGAGTTAGCTaGAGGAACTTCGTATTTGGG +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDEQRRVS*RNFVFG
Trigger: CCCAAATACGAAGTTCCTCCAGCTAACTCTCCTCTG...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCCCTTCTCCACCCCTCTaGGCTGGGTCTCAGAACAAT +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISPSPPL*AGSQNN
Trigger: ATTGTTCTGAGACCCAGCCCAGAGGGGTGGAGAAGG...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGCTGCAGGCAGTTTATTaGAATAGGGTTTGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLLQAVY*NRVCAP
Trigger: AGGCGCACAAACCCTATTCCAATAAACTGCCTGCAG...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACAACTCCCCATGGCAGTaGGACAAGATGCTGATATTG +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHNSPWQ*DKMLIL
Trigger: CAATATCAGCATCTTGTCCCACTGCCATGGGGAGTT...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGTCTGAGTACCTACTATaGGTCATGCTTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSSEYLL*VMLSAE
Trigger: TTCAGCAGAAAGCATGACCCATAGTAGGTACTCAGA...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGTCTCAGCGGACTAACTaGCGAATTTCCCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQSQRTN*RISHKV
Trigger: GACTTTGTGGGAAATTCGCCAGTTAGTCCGCTGAGA...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGTTCAGCTCCAAATGCTaGTTTATTCCGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSFSSKC*FIPSEY
Trigger: GTACTCTGACGGAATAAACCAGCATTTGGAGCTGAA...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGTTCAGCTCCAAATGCTaGTTTATTCCGTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEFSSKC*FIPSEY
Trigger: GTACTCTGACGGAATAAACCAGCATTTGGAGCTGAA...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTCTATCATGGAAGAGCTaGATTTGCCATTGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGLSWKS*ICHCLH
Trigger: GTGCAAACAATGGCAAATCCAGCTCTTCCATGATAG...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGGATTTTCAACGGCCCTaGTTCCCTATACTCAGGACA +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDEDFQRP*FPILRT
Trigger: TGTCCTGAGTATAGGGAACCAGGGCCGTTGAAAATC...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAAGAACTATAAGGCCCTaGATTCAGGTTTCTGAAACT +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRRTIRP*IQVSET
Trigger: AGTTTCAGAAACCTGAATCCAGGGCCTTATAGTTCT...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCCTGTTCCGAGGAGACTaGGTGTCTGAACCCCTCACT +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISLFRGD*VSEPLT
Trigger: AGTGAGGGGTTCAGACACCCAGTCTCCTCGGAACAG...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGACACACAATATAACATaGAGACCCGCCCGAAGCCTA +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDETHNIT*RPARSL
Trigger: TAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGT...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTTCTGGGGTGAGAGGATaGCCAAAGGGACTATGTACA +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSSGVRG*PKGLCT
Trigger: TGTACATAGTCCCTTTGGCCATCCTCTCACCCCAGA...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGGGCAGTTGTTCCCTTTaGGAATGTGCTCCACTGATA +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQGSCSL*ECAPLI
Trigger: TATCAGTGGAGCACATTCCCAAAGGGAACAACTGCC...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369236.5
CDS-3UTR TCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACCACCCGGAATATATCTaGCAATCTGCTGTTAACTGG +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHHPEYI*QSAVNW
Trigger: CCAGTTAACAGCAGATTGTCAGATATATTCCGGGTG...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGACCATTGCCAAAGGCTTaGATTGCATTTTTAAGACAT +
Preference number: 4 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRPLPKA*IAFLRH
Trigger: ATGTCTTAAAAATGCAATTCAAGCCTTTGGCAATGG...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGGAACTGTTTCTCAACTaGGCTCCTAAACTGGAATTT +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSELFLN*APKLEF
Trigger: AAATTCCAGTTTAGGAGCTCAGTTGAGAAACAGTTC...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGAACTGTTTCTCAACTaGGCTCCTAAACTGGAATTT +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTELFLN*APKLEF
Trigger: AAATTCCAGTTTAGGAGCTCAGTTGAGAAACAGTTC...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATTTGCACTTCGAGCAATaGCAAAAGACAATGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDLHFEQ*QKTMLV
Trigger: GACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAA...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGCTTTGTCAGATAACCTaGAAACCAAGGTACTGGATT +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSLCQIT*KPRYWI
Trigger: AATCCAGTACCTTGGTTTTCAGGTTATCTGACAAAG...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGCTTTTAGGTCGTTCTTaGAAAGATGGGTGTCACATA +
Preference number: 4 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHELLGRS*KDGCHI
Trigger: TATGTGACACCCATCTTTTCAAGAACGACCTAAAAG...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGACGATGAAAGAGAGCTaGATCAGCCAATATCCTGAT +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRTMKES*ISQYPD
Trigger: ATCAGGATATTGGCTGATTCAGCTCTCTTTCATCGT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCGGTGGCACATTCTGCTaGAAACCACCCCTGCATTGT +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISGGTFC*KPPLHC
Trigger: ACAATGCAGGGGTGGTTTTCAGCAGAATGTGCCACC...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACTCAGCATCCTGTGCTTaGGGCAGATTAAAATCTCAG +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHSASCA*GRLKSQ
Trigger: CTGAGATTTTAATCTGCCTCAAGCACAGGATGCTGA...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATATGCTTCTCAGGATACTaGTGGAGAAGTTGTCACCCC +
Preference number: 4 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHICFSGY*WRSCHP
Trigger: GGGGTGACAACTTCTCCATCAGTATCCTGAGAAGCA...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTTGCTATAAACCTGCATaGAACAGAACGAACATAAGC +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTCYKPA*NRTNIS
Trigger: GCTTATGTTCGTTCTGTTTCATGCAGGTTTATAGCA...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTGCGTGCGGTACTTGGTaGTGCAGCTCTGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCACGTW*CSSAPS
Trigger: TGAAGGAGCAGAGCTGCAGCACCAAGTACCGCACGC...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTGGCCTCCAGGCCGGATaGCAGGCTGAAGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSGLQAG*QAEVGL
Trigger: GAGACCAACTTCAGCCTGGCATCCGGCCTGGAGGCC...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGTCACATCGGAGCCATTaGCAAAGGCTTGAATTGCAT +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQSHRSH*QRLELH
Trigger: ATGCAATTCAAGCCTTTGGCAATGGCTCCGATGTGA...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTACAGAGGTGTGTATTaGCCGACACATTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRYRGVY*PTHWIS
Trigger: TGAAATCCAATGTGTCGGGCAATACACACCTCTGTA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGAACACAGCCCCAGTTTaGTTTACAGCCCAAGTTACA +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQNTAPV*FTAQVT
Trigger: TGTAACTTGGGCTGTAAAGCAAACTGGGGCTGTGTT...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTACAGGTATGCACGCTTaGACTTCGAGCAATGACAAA +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPTGMHA*TSSNDK
Trigger: TTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGT...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCTTCCCTCCACAGGTATaGACGCTTGCACTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISFPPQV*TLALRA
Trigger: TGCTCGAAGTGCAAGCGTGCATACCTGTGGAGGGAA...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTTAGGAAAAGAACTGTaGATCCCAGCATGGATGTGT +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRLGKEL*IPAWMC
Trigger: ACACATCCATGCTGGGATGCACAGTTCTTTTCCTAA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGGAATGGCGGAAACCTTaGTTGGCTTGCTTTGATAAG +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQEWRKP*LACFDK
Trigger: CTTATCAAAGCAAGCCAAGCAAGGTTTCCGCCATTC...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGAATGGCGGAAACCTTaGTTGGCTTGCTTTGATAAG +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPEWRKP*LACFDK
Trigger: CTTATCAAAGCAAGCCAAGCAAGGTTTCCGCCATTC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTATCACATAGTCTGATGTaGTTTATCAAAGAACAGAGG +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLSHSLM*FIKEQR
Trigger: CCTCTGTTCTTTGATAAAGCACATCAGACTATGTGA...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGTGGTAATTCTCTCCTaGCTGTTGTCATTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTVVILS*LLSLLL
Trigger: TAAAAGCAATGACAACAGGCAGGAGAGAATTACCAC...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTTCTCTAAAGAACTTCTaGCTGATTCAAGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTSLKNF*LIQGTL
Trigger: CAGAGTTCCTTGAATCAGGCAGAAGTTCTTTAGAGA...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCAGAACAATCAGAAGTaGAGGTGGCACATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCQNNQK*RWHILL
Trigger: CAGCAGAATGTGCCACCTGCACTTCTGATTGTTCTG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTCAGGCTGTGGTTCTCTaGAGGCAGTTTATTGGAATA +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPQAVVL*RQFIGI
Trigger: TATTCCAATAAACTGCCTGCAGAGAACCACAGCCTG...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGTGTCAGGGGTCAATGTaGACATTCGAAGTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDECQGSM*TFEVLL
Trigger: GAGCAAAACTTCGAATGTGCACATTGACCCCTGACA...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAATTCCCGATCAAGCATaGTTGGCACACCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIIPDQA*LAHQEA
Trigger: AGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAAT...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTAAACTGATTTGGTTCTaGGATTTCCATTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTKLIWF*DFHSPL
Trigger: GAGAGGAGAATGGAAATCGCAGAACCAAATCAGTTT...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTTCCCTTTGGGAATGTaGTCCACTGATATGAATGGG +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLFPLGM*STDMNG
Trigger: CCCATTCATATCAGTGGAGCACATTCCCAAAGGGAA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369236.5
CDS-3UTR CCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTTTGTGGTTATGTGGCTaGAAGCACCGAGACCTTCTT +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSLWLCG*KHRDLL
Trigger: AAGAAGGTCTCGGTGCTTCCAGCCACATAACCACAA...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTTTGTGGTTATGTGGCTaGAAGCACCGAGACCTTCTT +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCLWLCG*KHRDLL
Trigger: AAGAAGGTCTCGGTGCTTCCAGCCACATAACCACAA...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGATTTTGTGGTTATGTaGCTGGAAGCACCGAGACCT +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCDFVVM*LEAPRP
Trigger: AGGTCTCGGTGCTTCCAGCCACATAACCACAAAATC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTTAAAGATAATAGGGTaGACAGAGCGGTTACCACCA +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRLKIIG*TERLPP
Trigger: TGGTGGTAACCGCTCTGTCCACCCTATTATCTTTAA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGAATGTTGGAGAAAAGTaGCCACCAGTACTCGATCAT +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRNVGEK*PPVLDH
Trigger: ATGATCGAGTACTGGTGGCCACTTTTCTCCAACATT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCAGGCGGAAACCTTGCTTaGCTTGCTTTGATAAGAATC +
Preference number: 4 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSGGNLA*LALIRI
Trigger: GATTCTTATCAAAGCAAGCCAAGCAAGGTTTCCGCC...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATTCTGAGTACCTACTATaGGTCATGCTTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PGSCSADLCQATHLTKPNSEYLL*VMLSAE
Trigger: TTCAGCAGAAAGCATGACCCATAGTAGGTACTCAGA...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTTCTCAGCGGACTAACTaGCGAATTTCCCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSSQRTN*RISHKV
Trigger: GACTTTGTGGGAAATTCGCCAGTTAGTCCGCTGAGA...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCACCGAAGGACATGAAATaGAAGGATTCTGCCAATCTG +
Preference number: 4 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSPKDMK*KDSANL
Trigger: CAGATTGGCAGAATCCTTCCATTTCATGTCCTTCGG...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATCAGGGCAAACTGATTTaGTTCTGCGATTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDQGKLI*FCDFHS
Trigger: AGAATGGAAATCGCAGAACCAAATCAGTTTGCCCTG...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTTTTCCCCCACTCCCTTaGGCGAGGGAAGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCFPPLP*AREGRR
Trigger: TCTTCTCCCTTCCCTCGCCCAAGGGAGTGGGGGAAA...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
3UTR CAA 72 bp ATTCGAAGTTTTGCTCCTTTGAGCACTGCTGACTGTTaGCTTTCCTCAGCTAAAGCAGCTCTGGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: IRSFAPLSTADC*LSSAKAALASP
Trigger: AGGAGATGCCAGAGCTGCTTTAGCTGAGGAAAGCAAACAGTCAGCAGTGCTCAAAGGAGCAAAACTTCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
CDS-3UTR TCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATATGGAGGAGCAGCCATTaGTTTTGTGGTTATGTGGCT +
Preference number: 4 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIWRSSH*FCGYVA
Trigger: AGCCACATAACCACAAAATCAATGGCTGCTCCTCCA...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCCAGGGATTGAGGTATTaGATCGGCACACTCATTCCC +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISQGLRY*IGTLIP
Trigger: GGGAATGAGTGTGCCGATTCAATACCTCAATCCCTG...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGAAACTAAGATCACACTaGATGGCGGAAACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDEKLRSH*MAETLL
Trigger: AAGCAAGGTTTCCGCCATTCAGTGTGATCTTAGTTT...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTAGTGAGACAGGTAAATaGTTTAACTTATTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: AHCCTLILPYLANSPSSGSETGK*FNLLCS
Trigger: GGAGCACAATAAGTTAAATCATTTACCTGTCTCACT...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTTAGAGCTATTACGATaGAGAATTGGGGAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLLELLR*RIGEGN
Trigger: ATTGCCCTCCCCAATTCTTCATCGTAATAGCTCTAA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCCTTTTAGGCTCAGGATaGAGGTGGGTGTGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISLLGSG*RWVCLP
Trigger: AGGCAAACACACCCACCTTCATCCTGAGCCTAAAAG...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTGGGAATGTGCTCCACTaGTATGAATGGGACCACCCG +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCGNVLH*YEWDHP
Trigger: CGGGTGGTCCCATTCATATCAGTGGAGCACATTCCC...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369236.5
CDS-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACTACAGAGGTGTGTATTaGCCGACACATTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHYRGVY*PTHWIS
Trigger: TGAAATCCAATGTGTCGGGCAATACACACCTCTGTA...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGGTTTGGATGGAGCACTaGATCAGGTTTTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLVWMEH*IRFFTE
Trigger: TTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAAC...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTATCTTTTGTACAAGAGTaGAGAACTGTTTACAGTACA +
Preference number: 4 (lower is better)
Translates to: GAETSTTISRLWFSAGSLSFVQE*RTVYST
Trigger: TGTACTGTAAACAGTTCTGCACTCTTGTACAAAAGA...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGAAGTGTGTCAAGAGATaGTGCAGAACATTTACAAGC +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRKCVKR*CRTFTS
Trigger: GCTTGTAAATGTTCTGCAGCATCTCTTGACACACTT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATCTTCTCTATATTGTGTaGTTCTTCCTTCATGTGCTC +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDLLYIV*FFLHVL
Trigger: GAGCACATGAAGGAAGAAGCACACAATATAGAGAAG...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGAACATGGCCCACTGTTaGACCTTGATTTTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQNMAHC*TLILPY
Trigger: ATAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTT...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTCCACATCCGAGAAATaGCTTCAGCTACAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLSTSEK*LQLQLK
Trigger: TTTTAGCTGTAGCTGAAGGCATTTCTCGGATGTGGA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACTCCACATCCGAGAAATaGCTTCAGCTACAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHSTSEK*LQLQLK
Trigger: TTTTAGCTGTAGCTGAAGGCATTTCTCGGATGTGGA...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTGTTAACTGGTTCATATaGGGAATCCTCCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCVNWFI*GILQQI
Trigger: GATCTGCTGGAGGATTCCCCATATGAACCAGTTAAC...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTCTGTGCATCCCAGCATaGATGTGTTTCCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSLCIPA*MCFQRK
Trigger: CTTTCTTTGGAAACACATCCATGCTGGGATGCACAG...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGGCGCTCATAGATAACTaGCATTCCAAATATTTTGAC +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSALIDN*HSKYFD
Trigger: GTCAAAATATTTGGAATGCCAGTTATCTATGAGCGC...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCTCTCCAAGCTCAGGTaGGCCTTCTGCTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCLSKLR*AFCCHC
Trigger: ACAGTGACAGCAGAAGGCCCACCTGAGCTTGGAGAG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCACTATCATGGAAGAGCTaGATTTGCCATTGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSLSWKS*ICHCLH
Trigger: GTGCAAACAATGGCAAATCCAGCTCTTCCATGATAG...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCCAGCTAAAGCAGCTCTaGCATCTCCTATTCCCACCT +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISQLKQL*HLLFPP
Trigger: AGGTGGGAATAGGAGATGCCAGAGCTGCTTTAGCTG...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAGACCACAGCCAAATATaGCAGGGCAAACTGATTTGG +
Preference number: 4 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIDHSQI*QGKLIW
Trigger: CCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTC...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATTTTATTAGGATATTCTaGGGTGAGAGGATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDFIRIF*GERMAK
Trigger: TTTGGCCATCCTCTCACCCCAGAATATCCTAATAAA...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
3UTR CAA 72 bp TCCTACTTCACTCTAGTCTTAGGATCTGTGTTATGCTaGCAGGTGTCAGGGGTCAATGTGCACATTCGAAGT +
Preference number: 4 (lower is better)
Translates to: SYFTLVLGSVLC*QVSGVNVHIRS
Trigger: ACTTCGAATGTGCACATTGACCCCTGACACCTGCAAGCATAACACAGATCCTAAGACTAGAGTGAAGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 72 bp AGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RKLMLDHIALQS*CVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
CDS-3UTR TCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATATGTGCTCCACTTGCTaGAAAACATCTGATATGAAT +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDMCSTC*KTSDMN
Trigger: ATTCATATCAGATGTTTTTCAGCAAGTGGAGCACAT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355422.11
CDS-3UTR TCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCAGCGAACACTACTTATaGGGGGAAAGAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISSEHYL*GERSSV
Trigger: CACAGAGCTTCTTTCCCCTCATAAGTAGTGTTCGCT...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCCTGTCACGGAGGACATaGAACAAGATGCAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISLSRRT*NKMQAD
Trigger: ATCTGCTTGCATCTTGTTTCATGTCCTCCGTGACAG...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACAAAAGACAGCTCCTCTaGGGCCACAATTTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHKRQLL*GHNFVN
Trigger: ATTTACAAAATTGTGGCCTCAGAGGAGCTGTCTTTT...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGCTTTTAGGTCGTTCTTaGAAAGATGGGTGTCACATA +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDELLGRS*KDGCHI
Trigger: TATGTGACACCCATCTTTTCAAGAACGACCTAAAAG...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCGTCTTGCAGGAGTCCTaGAAATTCAAACAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISVLQES*KFKQLG
Trigger: GCCCAACTGTTTGAATTTGCAGGACTCCTGCAAGAC...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACAGATGTAATTCGTCTTaGAGGAGTCCTGCAAATTCA +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHRCNSS*RSPANS
Trigger: TGAATTTGCAGGACTCCTGCAAGACGAATTACATCT...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCATTCATTCTCAGACCCTaGTGGCCCCAGGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSFILRP*WPQGLV
Trigger: AACAAGCCCCTGGGGCCAGCAGGGTCTGAGAATGAA...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTTTAGGAAAAGAACTGTaGATCCCAGCATGGATGTGT +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSLGKEL*IPAWMC
Trigger: ACACATCCATGCTGGGATGCACAGTTCTTTTCCTAA...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGCTTCTCTATATTGTGTaGTTCTTCCTTCATGTGCTC +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDELLYIV*FFLHVL
Trigger: GAGCACATGAAGGAAGAAGCACACAATATAGAGAAG...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATTCACATAGTCTGATGTaGTTTATCAAAGAACAGAGG +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDSHSLM*FIKEQR
Trigger: CCTCTGTTCTTTGATAAAGCACATCAGACTATGTGA...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGTGGTAATTCTCTCCTaGCTGTTGTCATTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPVVILS*LLSLLL
Trigger: TAAAAGCAATGACAACAGGCAGGAGAGAATTACCAC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTCTCTAAAGAACTTCTaGCTGATTCAAGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLSLKNF*LIQGTL
Trigger: CAGAGTTCCTTGAATCAGGCAGAAGTTCTTTAGAGA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTCTTGTCAGCATCCTGTaGTTGAGGCAGATTAAAATC +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSLVSIL*LRQIKI
Trigger: GATTTTAATCTGCCTCAAGCACAGGATGCTGACAAG...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGAAACTGATTTGGTTCTaGGATTTCCATTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQKLIWF*DFHSPL
Trigger: GAGAGGAGAATGGAAATCGCAGAACCAAATCAGTTT...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATGCGCTCATAGATAACTaGCATTCCAAATATTTTGAC +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDALIDN*HSKYFD
Trigger: GTCAAAATATTTGGAATGCCAGTTATCTATGAGCGC...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAGGCGGAAACCTTGCTTaGCTTGCTTTGATAAGAATC +
Preference number: 4 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIGGNLA*LALIRI
Trigger: GATTCTTATCAAAGCAAGCCAAGCAAGGTTTCCGCC...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTTCGTTCTTGAAAAGATaGGTGTCACATAGTCTGATG +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPSFLKR*VSHSLM
Trigger: CATCAGACTATGTGACACCCATCTTTTCAAGAACGA...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGAGGAACTTCGTATTTaGGGATTAGCATCATCTTCA +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHEELRI*GLASSS
Trigger: TGAAGATGATGCTAATCCCCAAATACGAAGTTCCTC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCCCAGGACTTACCCCTaGGAGACTGAGTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCPRTYP*ETESQF
Trigger: AAACTGAGACTCAGTCTCCCAGGGGTAAGTCCTGGG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGATAATGCACGCAAGATaGGAAAACTTTAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSIMHAR*ENFKAN
Trigger: GTTTGCTTTAAAGTTTTCCCATCTTGCGTGCATTAT...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACAGATACACAGGACGATaGACAAATGTGTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHRYTGR*TNVSSS
Trigger: AGAAGATGACACATTTGTCCATCGTCCTGTGTATCT...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTAGATACACAGGACGATaGACAAATGTGTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GAKINSPWQWDKMLILAPRYTGR*TNVSSS
Trigger: AGAAGATGACACATTTGTCCATCGTCCTGTGTATCT...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGTTTATTAGGATATTCTaGGGTGAGAGGATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQFIRIF*GERMAK
Trigger: TTTGGCCATCCTCTCACCCCAGAATATCCTAATAAA...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
3UTR CAA 72 bp TTAGGATTAGGAGAGTGTCGTTCAGGGATTGAGGTATaGAATCGGCACACTCATTCCCCACTCTCTATTTTG +
Preference number: 4 (lower is better)
Translates to: LGLGECRSGIEV*NRHTHSPLSIL
Trigger: CAAAATAGAGAGTGGGGAATGAGTGTGCCGATTCAATACCTCAATCCCTGAACGACACTCTCCTAATCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 72 bp CTCAATGCCAGGAATACGATGCCAATAGGCCAGTTCTaGCTACCGTATGACAGAATAAAGCCCTTAAATGTC +
Preference number: 4 (lower is better)
Translates to: LNARNTMPIGQF*LPYDRIKPLNV
Trigger: GACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAACTGGCCTATTGGCATCGTATTCCTGGCATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
CDS-3UTR TCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCTTTGTCAGATAACCTaGAAACCAAGGTACTGGATT +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCLCQIT*KPRYWI
Trigger: AATCCAGTACCTTGGTTTTCAGGTTATCTGACAAAG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAAGGGTCCTGTTCTGCTaGTCTGTGCCAAGCAACTCA +
Preference number: 4 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSRVLFC*SVPSNS
Trigger: TGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCT...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCAGTTCTGGGGCAAATaGTGGTGTTTTAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCQFWGK*WCFRVT
Trigger: GGTGACCCTAAAACACCATCATTTGCCCCAGAACTG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATATTAGAGCTATTACGATaGAGAATTGGGGAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHILELLR*RIGEGN
Trigger: ATTGCCCTCCCCAATTCTTCATCGTAATAGCTCTAA...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATTTCATCAAAATCAACTaGAATGAGATACTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLKISGQSPGALQKKIGDFIKIN*NEILPA
Trigger: TGCAGGAAGTATCTCATTGCAGTTGATTTTGATGAA...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGTATATAAACTCCCACTaGTCTTACATCTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDEYINSH*SYISFP
Trigger: GGGAAAAGAGATGTAAGAGCAGTGGGAGTTTATATA...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAATGGAAGATGATAAGTaGTTAGCAAAGCCAGATGCC +
Preference number: 4 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIMEDDK*LAKPDA
Trigger: GGCATCTGGCTTTGCTAACCACTTATCATCTTCCAT...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACCTAATTAAATACAGTTaGGTGTCTGCTGAATTTCCC +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHLIKYS*VSAEFP
Trigger: GGGAAATTCAGCAGACACCCAACTGTATTTAATTAG...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTGAGTCTAAAGATCTCTaGCCAGTCTCCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSESKDL*PVSWRP
Trigger: AGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACTC...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGATAATGCACGCAAGATaGGAAAACTTTAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRIMHAR*ENFKAN
Trigger: GTTTGCTTTAAAGTTTTCCCATCTTGCGTGCATTAT...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
3UTR CAA 72 bp TCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGTTCTaGAAAAGATGGGTGTCACATAGTCTGATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SLLPVVIAFRSF*KRWVSHSLMCF
Trigger: AAAGCACATCAGACTATGTGACACCCATCTTTTCAAGAACGACCTAAAAGCAATGACAACAGGCAGGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 72 bp ACTTGTACTTCTACAGGAGATGTTCTTCCAAGGGTGTaGGCAATAAAGGCTGTTGCAAAACAGCTATGTGAG +
Preference number: 4 (lower is better)
Translates to: TCTSTGDVLPRV*AIKAVAKQLCE
Trigger: CTCACATAGCTGTTTTGCAACAGCCTTTATTGCCAACACCCTTGGAAGAACATCTCCTGTAGAAGTACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
CDS-3UTR TCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTCCTTTAGACAGCTGCTaGCAGACCTTGACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSPLDSC*QTLTLA
Trigger: AGCCAGAGTCAAGGTCTGTCAGCAGCTGTCTAAAGG...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCACTAACGTGTTGTCCCTaGACAAGATGCTTCCCCCTA +
Preference number: 4 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSLTCCP*TRCFPL
Trigger: TAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAG...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTAGTGAGACAGGTAAATaGTTTAACTTATTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCSETGK*FNLLCS
Trigger: GGAGCACAATAAGTTAAATCATTTACCTGTCTCACT...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGTCTTTTGTACAAGAGTaGAGAACTGTTTACAGTACA +
Preference number: 4 (lower is better)
Translates to: DAELSATARGFSESAFDESFVQE*RTVYST
Trigger: TGTACTGTAAACAGTTCTGCACTCTTGTACAAAAGA...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACTTCATCAAAATCAACTaGAATGAGATACTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHFIKIN*NEILPA
Trigger: TGCAGGAAGTATCTCATTGCAGTTGATTTTGATGAA...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTTATATAAACTCCCACTaGTCTTACATCTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: STGMHACTSSNDKRQCLSYINSH*SYISFP
Trigger: GGGAAAAGAGATGTAAGAGCAGTGGGAGTTTATATA...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCGTCAATACAGCTCAATaGCAGGAATACGATGCCAAT +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISVNTAQ*QEYDAN
Trigger: ATTGGCATCGTATTCCTGGCATTGAGCTGTATTGAC...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAGGATTTGCCATTGTTTaGACGTGGCCCAGGACTTAC +
Preference number: 4 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSGFAIV*TWPRTY
Trigger: GTAAGTCCTGGGCCACGTGCAAACAATGGCAAATCC...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
3UTR CAA 72 bp TTTCTGAAGGTGGAATCTCCTCCTCTTTACTTAATGTaGGAGAAAAGTGGCCACCAGTACTCGATCATTGTA +
Preference number: 4 (lower is better)
Translates to: FLKVESPPLYLM*EKSGHQYSIIV
Trigger: TACAATGATCGAGTACTGGTGGCCACTTTTCTCCAACATTAAGTAAAGAGGAGGAGATTCCACCTTCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
CDS-3UTR TCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCACCCGGAATATATCTaGCAATCTGCTGTTAACTGG +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCHPEYI*QSAVNW
Trigger: CCAGTTAACAGCAGATTGTCAGATATATTCCGGGTG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCGATGAGCTGTATTTGTaGAGTTCATATCAGAGCGAA +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISDELYL*SSYQSE
Trigger: TTCGCTCTGATATGAACTTCACAAATACAGCTCATC...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCAAGACAGGAAGTGTCTaGATATGGACCAAATCAAAG +
Preference number: 4 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISKTGSV*IWTKSK
Trigger: CTTTGATTTGGTCCATATTCAGACACTTCCTGTCTT...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTTGTGCTCCACTGATATaGATGGGACCACCCGGAATA +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSCAPLI*MGPPGI
Trigger: TATTCCGGGTGGTCCCATTCATATCAGTGGAGCACA...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369236.5
CDS-3UTR GCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTTCACATCGGAGCCATTaGCAAAGGCTTGAATTGCAT +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCSHRSH*QRLELH
Trigger: ATGCAATTCAAGCCTTTGGCAATGGCTCCGATGTGA...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTGAAGGTGGGTGTGTTTaGCTTCTCTATCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCEGGCV*LLYHGR
Trigger: TCTTCCATGATAGAGAAGGCAAACACACCCACCTTC...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCATTAGGATCTGTGTTATaGTTGCAGGTGTCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSLGSVL*LQVSGV
Trigger: GACCCCTGACACCTGCAAGCATAACACAGATCCTAA...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTGAGTCACGGTCTGCATaGACCCTAGTTACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSESRSA*TLVTVW
Trigger: CCAAACAGTAACTAGGGTCCATGCAGACCGTGACTC...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCCGAAGGACATGAAATaGAAGGATTCTGCCAATCTG +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCPKDMK*KDSANL
Trigger: CAGATTGGCAGAATCCTTCCATTTCATGTCCTTCGG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTAGCGAACACTACTTATaGGGGGAAAGAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSSEHYL*GERSSV
Trigger: CACAGAGCTTCTTTCCCCTCATAAGTAGTGTTCGCT...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCAGTTGGGTGTCTGCTaGATTTCCCTTGAAAACATT +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCQLGVC*ISLENI
Trigger: AATGTTTTCAAGGGAAATTCAGCAGACACCCAACTG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTGGGTGTCACATAGTCTaGTGTGCTTTATCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCGCHIV*CALSKN
Trigger: GTTCTTTGATAAAGCACATCAGACTATGTGACACCC...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAAAACAAATGGTCACTTaGGAAGCAGAGCCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSKQMVT*EAEPCQ
Trigger: TTGACACGGCTCTGCTTCTCAAGTGACCATTTGTTT...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAACAGGTATGCACGCTTaGACTTCGAGCAATGACAAA +
Preference number: 4 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSTGMHA*TSSNDK
Trigger: TTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGT...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTACCTTCAGACCAAACTaGTCCAAACAGTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSTFRPN*SKQWPR
Trigger: TCTTGGCCACTGTTTGGAGCAGTTTGGTCTGAAGGT...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTACATGGACTCCAAAATaGTTTGGCTCTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSTWTPK*FGSPTL
Trigger: GAGAGTGGGAGAGCCAAAGCATTTTGGAGTCCATGT...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCTTGTCAGCATCCTGTaGTTGAGGCAGATTAAAATC +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCLVSIL*LRQIKI
Trigger: GATTTTAATCTGCCTCAAGCACAGGATGCTGACAAG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTGCAAATTCAAACAGTTaGGCTTCTCCCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCANSNS*ASPSLH
Trigger: ATGAAGAGAGGGAGAAGCCCAACTGTTTGAATTTGC...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTTTAAAGATAATAGGGTaGACAGAGCGGTTACCACCA +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCLKIIG*TERLPP
Trigger: TGGTGGTAACCGCTCTGTCCACCCTATTATCTTTAA...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAACCCTAGTTACTGTTTaGTTTCATCAAAATCAACTG +
Preference number: 4 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHITLVTV*FHQNQL
Trigger: CAGTTGATTTTGATGAAACCAAACAGTAACTAGGGT...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTCTGCAGGCAGTTTATTaGAATAGGGTTTGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSLQAVY*NRVCAP
Trigger: AGGCGCACAAACCCTATTCCAATAAACTGCCTGCAG...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCAGGGCAAACTGATTTaGTTCTGCGATTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCQGKLI*FCDFHS
Trigger: AGAATGGAAATCGCAGAACCAAATCAGTTTGCCCTG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTTTGCTGAAAAACATCTaGTATGAATGGGACCACCCG +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSLLKNI*YEWDHP
Trigger: CGGGTGGTCCCATTCATATCAGATGTTTTTCAGCAA...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355422.11
CDS-3UTR TCA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTTGGTCCACAGTTTATTaGTTCAAGTACATCGTGCAT +
Preference number: 4 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCWSTVY*FKYIVH
Trigger: ATGCACGATGTACTTGAATCAATAAACTGTGGACCA...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCATGTGTCAAGAGATGCTaGAGAACATTTACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSCVKRC*RTFTSS
Trigger: GCTGCTTGTAAATGTTCTGCAGCATCTCTTGACACA...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTAAAATTAACTCCCCATaGCAGTGGGACAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSKINSP*QWDKML
Trigger: CAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTT...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
3UTR CAA 72 bp ATTCATTTAAGCAGCCCTTTTCTGGTCCACAGTTTATaGATTCAAGTACATCGTGCATGTCTAACTAACTGC +
Preference number: 4 (lower is better)
Translates to: IHLSSPFLVHSL*IQVHRACLTNC
Trigger: GCAGTTAGTTAGACATGCACGATGTACTTGAATCAATAAACTGTGGACCAGAAAAGGGCTGCTTAAATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
3UTR CAA 72 bp ATCACAAAACCACTTCCAAAGTCCATATTGCAAAACTaGTACTTCTACAGGAGATGTTCTTCCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: ITKPLPKSILQN*YFYRRCSSKGV
Trigger: AACACCCTTGGAAGAACATCTCCTGTAGAAGTACAAGTTTTGCAATATGGACTTTGGAAGTGGTTTTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355422.11
ENST00000369236.5
ENST00000439649.7
CDS-3UTR TCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTTTGCACTTCGAGCAATaGCAAAAGACAATGCTTGTC +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSLHFEQ*QKTMLV
Trigger: GACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAA...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAAAGACAGGAAGTGTCTaGATATGGACCAAATCAAAG +
Preference number: 4 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSKTGSV*IWTKSK
Trigger: CTTTGATTTGGTCCATATTCAGACACTTCCTGTCTT...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTACGATGAAAGAGAGCTaGATCAGCCAATATCCTGAT +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSTMKES*ISQYPD
Trigger: ATCAGGATATTGGCTGATTCAGCTCTCTTTCATCGT...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR TCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAGTTCTTGCTACCGTATaGCAGAATAAAGCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSVLATV*QNKALK
Trigger: TTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAAC...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTGTTTGGATGGAGCACTaGATCAGGTTTTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSVWMEH*IRFFTE
Trigger: TTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAAC...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR GCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTAGATGTAATTCGTCTTaGAGGAGTCCTGCAAATTCA +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSRCNSS*RSPANS
Trigger: TGAATTTGCAGGACTCCTGCAAGACGAATTACATCT...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCACTAATTAAATACAGTTaGGTGTCTGCTGAATTTCCC +
Preference number: 4 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSLIKYS*VSAEFP
Trigger: GGGAAATTCAGCAGACACCCAACTGTATTTAATTAG...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CCA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTACTGAGCTCCTAAACTaGAATTTCAGCTATACAAGA +
Preference number: 4 (lower is better)
Translates to: TGISAIQENRKQITWFLSTELLN*NFSYTR
Trigger: TCTTGTATAGCTGAAATTCCAGTTTAGGAGCTCAGT...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS GCA 90 bp CTCGGCTCCCTCCTGGGCGTCCGCTCCTCTCACACTCTCGCCCGGTaGCCAGGACTCGGGCGCTTCCGCACCCCAGCCCAGGGCGAGCGC +
Preference number: 5 (lower is better)
Translates to: LGSLLGVRSSHTLAR*PGLGRFRTPAQGER
Trigger: GCGCTCGCCCTGGGCTGGGGTGCGGAAGCGCCCGAGTCCTGGGCACCGGGCGAGAGTGTGAGAGGAGCGGACGCCCAGGAGGGAGCCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369234.5
ENST00000439649.8
ENST00000682194.1
CDS CCA 90 bp GGTCCGACCCAACCCCCTACCCGCCGCGCGTCCTCGGCTCCCTCCTaGGCGTCCGCTCCTCTCACACTCTCGCCCGGTGCCCAGGACTCG +
Preference number: 5 (lower is better)
Translates to: GPTQPPTRRASSAPS*ASAPLTLSPGAQDS
Trigger: CGAGTCCTGGGCACCGGGCGAGAGTGTGAGAGGAGCGGACGCCCAGGAGGGAGCCGAGGACGCGCGGCGGGTAGGGGGTTGGGTCGGACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682194.1
CDS CCA 90 bp GGGTTCAGGTCCGACCCAACCCGCCGCGCGTCCTCGGCTCCCTCCTaGGCGTCCGCTCCTCTCACACTCTCGCCCGGTGCCCAGGACTCG +
Preference number: 5 (lower is better)
Translates to: GFRSDPTRRASSAPS*ASAPLTLSPGAQDS
Trigger: CGAGTCCTGGGCACCGGGCGAGAGTGTGAGAGGAGCGGACGCCCAGGAGGGAGCCGAGGACGCGCGGCGGGTTGGGTCGGACCTGAACCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369234.5
ENST00000439649.8
CDS CCA 90 bp CCGGGTCTGGCAGCAGCCACCGCCGCCGGCGACTCAGCTCCGGGATaGCGAGGGCGGGAGGCGGTTCCGCTTTTAGGGGTTCAGGTCCGA +
Preference number: 5 (lower is better)
Translates to: PGLAAATAAGDSAPG*RGREAVPLLGVQVR
Trigger: TCGGACCTGAACCCCTAAAAGCGGAACCGCCTCCCGCCCTCGCCATCCCGGAGCTGAGTCGCCGGCGGCGGTGGCTGCTGCCAGACCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS TCA 90 bp TGGCGCTGCGGCACTCATCCTTGGCCTCCAGGCCGGATGCCAGGCTaGAGTTGGTCTCCTTGCCCGCCACGCACTGCCTTAGCGTGCGGT +
Preference number: 5 (lower is better)
Translates to: WRCGTHPWPPGRMPG*SWSPCPPRTALACG
Trigger: ACCGCACGCTAAGGCAGTGCGTGGCGGGCAAGGAGACCAACTTCAGCCTGGCATCCGGCCTGGAGGCCAAGGATGAGTGCCGCAGCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS TCA 90 bp GGACAGCTGTGCTGCTCTGGCCGCCCAAAGTTCAGCTCCATCCAGTaGAAGAGGAAACTCCGGGTCTGGCAGCAGCCACCGCCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: GQLCCSGRPKFSSIQ*KRKLRVWQQPPPPA
Trigger: CGCCGGCGGCGGTGGCTGCTGCCAGACCCGGAGTTTCCTCTTTCACTGGATGGAGCTGAACTTTGGGCGGCCAGAGCAGCACAGCTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS GCA 90 bp AGGCCGGATGCCAGGCTGAAGTTGGTCTCCTTGCCCGCCACGCACTaGCTTAGCGTGCGGTACTTGGTGCTGCAGCTCTGCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RPDARLKLVSLPATH*LSVRYLVLQLCSFR
Trigger: CCTGAAGGAGCAGAGCTGCAGCACCAAGTACCGCACGCTAAGGCAGTGCGTGGCGGGCAAGGAGACCAACTTCAGCCTGGCATCCGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS-3UTR CAA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACAGCCGCCGCTGGGTCTaGCCGAGGGAGCTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNSRRWV*PRELSV
Trigger: CACGCTGAGCTCCCTCGGCAAGACCCAGCGGCGGCT...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS CCA 90 bp CGAGGGAGCTCAGCGTGCAGCGATCCCCGGACAGCTGTGCTGCTCTaGCCGCCCAAAGTTCAGCTCCATCCAGTGAAAGAGGAAACTCCG +
Preference number: 5 (lower is better)
Translates to: RGSSACSDPRTAVLL*PPKVQLHPVKEETP
Trigger: CGGAGTTTCCTCTTTCACTGGATGGAGCTGAACTTTGGGCGGCCAGAGCAGCACAGCTGTCCGGGGATCGCTGCACGCTGAGCTCCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS CCA 90 bp TGCGGTACTTGGTGCTGCAGCTCTGCTCCTTCAGGCACTGATCACTaGCTTTCACGCAATCCAGGCGGTCTCCGCCGCTCACTTCGGCCG +
Preference number: 5 (lower is better)
Translates to: CGTWCCSSAPSGTDH*LSRNPGGLRRSLRP
Trigger: CGGCCGAAGTGAGCGGCGGAGACCGCCTGGATTGCGTGAAAGCCAGTGATCAGTGCCTGAAGGAGCAGAGCTGCAGCACCAAGTACCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS GCA 90 bp TGGTCTCCTTGCCCGCCACGCACTGCCTTAGCGTGCGGTACTTGGTaGTGCAGCTCTGCTCCTTCAGGCACTGATCACTGGCTTTCACGC +
Preference number: 5 (lower is better)
Translates to: WSPCPPRTALACGTW*CSSAPSGTDHWLSR
Trigger: GCGTGAAAGCCAGTGATCAGTGCCTGAAGGAGCAGAGCTGCAGCACCAAGTACCGCACGCTAAGGCAGTGCGTGGCGGGCAAGGAGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS TCA 90 bp CTTAGCGTGCGGTACTTGGTGCTGCAGCTCTGCTCCTTCAGGCACTaGTCACTGGCTTTCACGCAATCCAGGCGGTCTCCGCCGCTCACT +
Preference number: 5 (lower is better)
Translates to: LSVRYLVLQLCSFRH*SLAFTQSRRSPPLT
Trigger: AGTGAGCGGCGGAGACCGCCTGGATTGCGTGAAAGCCAGTGATCAGTGCCTGAAGGAGCAGAGCTGCAGCACCAAGTACCGCACGCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS GCA 90 bp TATCTGCGACTGGGTCGGGAGACCGGTCTAGGAGCCAGCCGGCAGTaGTCGGGATCTTTGCTGATGTCCAAGTTCATCTCTCGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: YLRLGRETGLGASRQ*SGSLLMSKFISRGD
Trigger: GTCTCCCCGAGAGATGAACTTGGACATCAGCAAAGATCCCGAGCACTGCCGGCTGGCTCCTAGACCGGTCTCCCGACCCAGTCGCAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683474.1
CDS-3UTR CAA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTAGCCGCCGCTGGGTCTaGCCGAGGGAGCTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: AHCCTLILPYLANSPSSGSRRWV*PRELSV
Trigger: CACGCTGAGCTCCCTCGGCAAGACCCAGCGGCGGCT...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS TCA 90 bp TGCGGCGGTTGCAGACATCGTTGGACACGCTGGTGGTGCACGGGGTaGTGTACGCCGACCTGTACTTCTTGCAAATGTCGTCGAGGTTGC +
Preference number: 5 (lower is better)
Translates to: CGGCRHRWTRWWCTG*CTPTCTSCKCRRGC
Trigger: GCAACCTCGACGACATTTGCAAGAAGTACAGGTCGGCGTACATCACCCCGTGCACCACCAGCGTGTCCAACGATGTCTGCAACCGCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS GCA 90 bp TCTCCTTGCCCGCCACGCACTGCCTTAGCGTGCGGTACTTGGTGCTaGAGCTCTGCTCCTTCAGGCACTGATCACTGGCTTTCACGCAAT +
Preference number: 5 (lower is better)
Translates to: SPCPPRTALACGTWC*SSAPSGTDHWLSRN
Trigger: ATTGCGTGAAAGCCAGTGATCAGTGCCTGAAGGAGCAGAGCTGCAGCACCAAGTACCGCACGCTAAGGCAGTGCGTGGCGGGCAAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS GCA 90 bp CCGAGTTGGGCCAGGACGATTTCCGAGCAGAGCCCTCGGCTCGGATaGTCGTTAGGGATGTTAGTGGTTATTGGAAGCGGCGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: PSWARTISEQSPRLG*SLGMLVVIGSGAEN
Trigger: ATTCTCCGCGCCGCTTCCAATAACCACTAACATCCCTAACGAGCATCCGAGCCGAGGGCTCTGCTCGGAAATCGTCCTGGCCCAACTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682743.1
CDS GCA 90 bp AAGTCTACACTGGGTCGGGAGACCGGTCTAGGAGCCAGCCGGCAGTaGTCGGGATCTTTGCTGATGTCCAAGTTCATCTCTCGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: KSTLGRETGLGASRQ*SGSLLMSKFISRGD
Trigger: GTCTCCCCGAGAGATGAACTTGGACATCAGCAAAGATCCCGAGCACTGCCGGCTGGCTCCTAGACCGGTCTCCCGACCCAGTGTAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683792.1
CDS CCA 90 bp AGTTGGTCTCCTTGCCCGCCACGCACTGCCTTAGCGTGCGGTACTTaGTGCTGCAGCTCTGCTCCTTCAGGCACTGATCACTGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: SWSPCPPRTALACGT*CCSSAPSGTDHWLS
Trigger: TGAAAGCCAGTGATCAGTGCCTGAAGGAGCAGAGCTGCAGCACCAAGTACCGCACGCTAAGGCAGTGCGTGGCGGGCAAGGAGACCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS-3UTR CAA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGAGCTGGCCCCAGGGGCTaGTTCTTAACCCGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRAGPRG*FLTRRA
Trigger: TGCCCTCCGGGTTAAGAACAAGCCCCTGGGGCCAGC...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS CCA 90 bp GCAGAGCCCTCGGCTCGGATGCTCGTTAGGGATGTTAGTGGTTATTaGAAGCGGCGCGGAGAATGGCGTGTTCCGAGGCCAGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: AEPSARMLVRDVSGY*KRRGEWRVPRPDFF
Trigger: GAAGAAATCTGGCCTCGGAACACGCCATTCTCCGCGCCGCTTCCAATAACCACTAACATCCCTAACGAGCATCCGAGCCGAGGGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682743.1
CDS-3UTR CAA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGAGCTGGATTTGCCATaGTTTGCACGTGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEELDLP*FARGPG
Trigger: TCCTGGGCCACGTGCAAACAATGGCAAATCCAGCTC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS GCA 90 bp GAGACCGAGTTTGAATCAAATCTGCGTGCGCCCAGCTGTCAAATCTaGAAACCTATCACGCCAGACAATGGGCCGCCGCGGAGGACAGAC +
Preference number: 5 (lower is better)
Translates to: ETEFESNLRAPSCQI*KPITPDNGPPRRTD
Trigger: GTCTGTCCTCCGCGGCGGCCCATTGTCTGGCGTGATAGGTTTGCAGATTTGACAGCTGGGCGCACGCAGATTTGATTCAAACTCGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683792.1
CDS CCA 90 bp ATGCTCGTTAGGGATGTTAGTGGTTATTGGAAGCGGCGCGGAGAATaGCGTGTTCCGAGGCCAGATTTCTTCTGGCCAGAGGACCCTCGG +
Preference number: 5 (lower is better)
Translates to: MLVRDVSGYWKRRGE*RVPRPDFFWPEDPR
Trigger: CCGAGGGTCCTCTGGCCAGAAGAAATCTGGCCTCGGAACACGCCATTCTCCGCGCCGCTTCCAATAACCACTAACATCCCTAACGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682743.1
CDS-3UTR CAA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTATGGCACTTGCGGCGGTaGCAGACATCGTTGGACACG +
Preference number: 5 (lower is better)
Translates to: GAETSTTISRLWFSAGSLWHLRR*QTSLDT
Trigger: CGTGTCCAACGATGTCTGCAACCGCCGCAAGTGCCA...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTATGCTTGGCCGGGACCTaGTCAAAGAACTGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: GAETSTTISRLWFSAGSLCLAGT*SKNCRR
Trigger: CCTCCGGCAGTTCTTTGACAAGGTCCCGGCCAAGCA...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGTTTCCCCCACTCCCTaGGGCGAGGGAAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTVSPTP*GEGREK
Trigger: CTTCTCCCTTCCCTCGCCCAAGGGAGTGGGGGAAAC...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGCTTAGCGTGCGGTACTaGGTGCTGCAGCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHELSVRY*VLQLCS
Trigger: GGAGCAGAGCTGCAGCACCAAGTACCGCACGCTAAG...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTCTGAAGTTGGTCTCCTaGCCCGCCACGCACTGCCTT +
Preference number: 5 (lower is better)
Translates to: AHCCTLILPYLANSPSSGLKLVS*PATHCL
Trigger: AAGGCAGTGCGTGGCGGGCAAGGAGACCAACTTCAG...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATGATGCCAGGCTGAAGTaGGTCTCCTTGCCCGCCACG +
Preference number: 5 (lower is better)
Translates to: SLKISGQSPGALQKKIGDDARLK*VSLPAT
Trigger: CGTGGCGGGCAAGGAGACCAACTTCAGCCTGGCATC...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCTGCGGCACTCATCCTaGGCCTCCAGGCCGGATGCC +
Preference number: 5 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCLRHSS*ASRPDA
Trigger: GGCATCCGGCCTGGAGGCCAAGGATGAGTGCCGCAG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGGCTGGCCCCAGGGGCTaGTTCTTAACCCGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: DAELSATARGFSESAFDEAGPRG*FLTRRA
Trigger: TGCCCTCCGGGTTAAGAACAAGCCCCTGGGGCCAGC...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGATGCCAGGCTGAAGTaGGTCTCCTTGCCCGCCACG +
Preference number: 5 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHDARLK*VSLPAT
Trigger: CGTGGCGGGCAAGGAGACCAACTTCAGCCTGGCATC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACCAAAGCCTTCTGAGTTaGGATGGAGCACTGCATCAG +
Preference number: 5 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNQSLLS*DGALHQ
Trigger: CTGATGCAGTGCTCCATCCAAACTCAGAAGGCTTTG...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGAACATGGCCCACTGTaGCACCTTGATTTTGCCTTA +
Preference number: 5 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEEHGPL*HLDFAL
Trigger: TAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGCAGGGCAAACTGATTaGGTTCTGCGATTTCCATTC +
Preference number: 5 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEAGQTD*VLRFPF
Trigger: GAATGGAAATCGCAGAACCAAATCAGTTTGCCCTGC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGGTTTCCCCCACTCCCTaGGGCGAGGGAAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: DAELSATARGFSESAFDEVSPTP*GEGREK
Trigger: CTTCTCCCTTCCCTCGCCCAAGGGAGTGGGGGAAAC...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS TCA 90 bp CAGGACCAGCAGTGGGCTCAGACCACAGCTTGGAGGAGCAGCCATTaGTTTTGTGGTTATGTGGCTGGAAGCACCGAGACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: QDQQWAQTTAWRSSH*FCGYVAGSTETFFF
Trigger: GAAAAAGAAGGTCTCGGTGCTTCCAGCCACATAACCACAAAATCAATGGCTGCTCCTCCAAGCTGTGGTCTGAGCCCACTGCTGGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS-3UTR CAA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCCTGCGGCACTCATCCTaGGCCTCCAGGCCGGATGCC +
Preference number: 5 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISLRHSS*ASRPDA
Trigger: GGCATCCGGCCTGGAGGCCAAGGATGAGTGCCGCAG...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGCTGCATCCAGGCAGTaGTTCCCTTTGGGAATGTGC +
Preference number: 5 (lower is better)
Translates to: AHCCTLILPYLANSPSSGAASRQ*FPLGMC
Trigger: GCACATTCCCAAAGGGAACAACTGCCTGGATGCAGC...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGCGGTTGCAGACATCGTaGGACACGCTGGTGGTGCAC +
Preference number: 5 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQRLQTS*DTLVVH
Trigger: GTGCACCACCAGCGTGTCCAACGATGTCTGCAACCG...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGTGGCACTTGCGGCGGTaGCAGACATCGTTGGACACG +
Preference number: 5 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQWHLRR*QTSLDT
Trigger: CGTGTCCAACGATGTCTGCAACCGCCGCAAGTGCCA...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGTGCTTGGCCGGGACCTaGTCAAAGAACTGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: DAELSATARGFSESAFDECLAGT*SKNCRR
Trigger: CCTCCGGCAGTTCTTTGACAAGGTCCCGGCCAAGCA...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAAGCCCTGTCCGGTGTTaGAGGAACTCGAAGACACAA +
Preference number: 5 (lower is better)
Translates to: GAETSTTISRLWFSAGSLSPVRC*RNSKTQ
Trigger: TTGTGTCTTCGAGTTCCTCAAACACCGGACAGGGCT...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTCTTAGCGTGCGGTACTaGGTGCTGCAGCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCLSVRY*VLQLCS
Trigger: GGAGCAGAGCTGCAGCACCAAGTACCGCACGCTAAG...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGAGGCAGTTGTTCCCTTaGGGAATGTGCTCCACTTGC +
Preference number: 5 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHERQLFP*GMCSTC
Trigger: GCAAGTGGAGCACATTCCCAAAGGGAACAACTGCCT...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355422.11
CDS-3UTR CAA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATGCTGCATCCAGGCAGTaGTTCCCTTTGGGAATGTGC +
Preference number: 5 (lower is better)
Translates to: SLKISGQSPGALQKKIGDAASRQ*FPLGMC
Trigger: GCACATTCCCAAAGGGAACAACTGCCTGGATGCAGC...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTCAAATGTCGTCGAGGTaGCAGGCCTTCGCTGCATCC +
Preference number: 5 (lower is better)
Translates to: GAKINSPWQWDKMLILAPQMSSR*QAFAAS
Trigger: GGATGCAGCGAAGGCCTGCAACCTCGACGACATTTG...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGGCCGACCTGTACTTCTaGCAAATGTCGTCGAGGTTG +
Preference number: 5 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSADLYF*QMSSRL
Trigger: CAACCTCGACGACATTTGCAAGAAGTACAGGTCGGC...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACCCACAAAGCCCACTCTaGGTAAGAATCTTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNPQSPL*VRIFFV
Trigger: CACAAAGAAGATTCTTACCAAGAGTGGGCTTTGTGG...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACCCTCTTTACTTAATGTaGGAGAAAAGTGGCCACCAG +
Preference number: 5 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNPLYLM*EKSGHQ
Trigger: CTGGTGGCCACTTTTCTCCAACATTAAGTAAAGAGG...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTGCCCACTGTTGCACCTaGATTTTGCCTTATCTCGCC +
Preference number: 5 (lower is better)
Translates to: AHCCTLILPYLANSPSSGAHCCT*ILPYLA
Trigger: GGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTCAGATCCATTCACCCTaGGAACATGGCCCACTGTTG +
Preference number: 5 (lower is better)
Translates to: AHCCTLILPYLANSPSSGQIHSP*EHGPLL
Trigger: CAACAGTGGGCCATGTTCCAAGGGTGAATGGATCTG...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTAAGTCTACCCCCGTTTaGGGCTCTGTCCTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: GAKINSPWQWDKMLILAPKSTPV*GSVLPG
Trigger: GCCAGGAAGGACAGAGCCCAAAACGGGGGTAGACTT...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GGGGCTGAGACCTCAACGACTATTAGCAGGCTGTGGTTCTCTGCAGGCAGTTTAATACTGATGGAGAAGTaGTCACCCCTGGGGTTTGTC +
Preference number: 5 (lower is better)
Translates to: GAETSTTISRLWFSAGSLILMEK*SPLGFV
Trigger: GACAAACCCCAGGGGTGACAACTTCTCCATCAGTAT...TAAACTGCCTGCAGAGAACCACAGCCTGCTAATAGTCGTTGAGGTCTCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS GCA 90 bp GATGTCCAAGTTCATCTCTCGGGGAGACCGAGTTTGAATCAAATCTaGGTGCGCCCAGCTGTCAAATCTGCAAACCTATCACGCCAGACA +
Preference number: 5 (lower is better)
Translates to: DVQVHLSGRPSLNQI*VRPAVKSANLSRQT
Trigger: TGTCTGGCGTGATAGGTTTGCAGATTTGACAGCTGGGCGCACGCAGATTTGATTCAAACTCGGTCTCCCCGAGAGATGAACTTGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683474.1
ENST00000683792.1
CDS-3UTR CAA 90 bp GTGTGTGTGACAGAGAGAACCACGCTTTATTGGCGGAGCCTTATGTGCCAGCGATTGGAGGAGCAGCCATaGATTTTGTGGTTATGTGGC +
Preference number: 5 (lower is better)
Translates to: VCVTERTTLYWRSLMCQRLEEQP*ILWLCG
Trigger: GCCACATAACCACAAAATCAATGGCTGCTCCTCCAA...TCGCTGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTCTCTGTCACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGAAAACCACCCCTGCATaGTCTCTGGGAGGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: DAELSATARGFSESAFDEKTTPA*SLGGRR
Trigger: TCTCCTCCCTCCCAGAGACAATGCAGGGGTGGTTTT...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTAGAGAAAACCTTCTATaGATGCCGGTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: AHCCTLILPYLANSPSSGRENLL*MPVLGL
Trigger: CAAGCCCAGCACCGGCATCAATAGAAGGTTTTCTCT...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATGCGGATGTGAGCCTGTaGGGAGAGATGCTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: PGSCSADLCQATHLTKPNADVSL*GEMLVS
Trigger: AGAAACTAGCATCTCTCCCAACAGGCTCACATCCGC...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTAAGTCTACCCCCGTTTaGGGCTCTGTCCTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCKSTPV*GSVLPG
Trigger: GCCAGGAAGGACAGAGCCCAAAACGGGGGTAGACTT...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGATACTGATGGAGAAGTaGTCACCCCTGGGGTTTGTC +
Preference number: 5 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEILMEK*SPLGFV
Trigger: GACAAACCCCAGGGGTGACAACTTCTCCATCAGTAT...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TGTGCCCAGGCCAGTGGTAATTCTCTCCTGCCTGTTGTCATTGCTTTTAGGTCGTGGATTTGCCATTGTTaGCACGTGGCCCAGGACTTA +
Preference number: 5 (lower is better)
Translates to: CAQASGNSLLPVVIAFRSWICHC*HVAQDL
Trigger: TAAGTCCTGGGCCACGTGCAAACAATGGCAAATCCA...CGACCTAAAAGCAATGACAACAGGCAGGAGAGAATTACCACTGGCCTGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATCCCGATCAAGCATGCTaGGCACACCAGGAAGCTAAT +
Preference number: 5 (lower is better)
Translates to: SLKISGQSPGALQKKIGDPDQAC*AHQEAN
Trigger: ATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGG...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACTCTCAGAGTCTGCTTTaGATGAGCTGTATTTGTGAA +
Preference number: 5 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNSQSLL*MSCICE
Trigger: TTCACAAATACAGCTCATCAAAAGCAGACTCTGAGA...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AACAAAGCTCAGTCGACCCCTCACCCCTGTTCCGAGGAGACTGGGTGTCTGAACGACTATGCCTTTATCTaGGATTTCATAGATTTCCCC +
Preference number: 5 (lower is better)
Translates to: NKAQSTPHPCSEETGCLNDYAFI*DFIDFP
Trigger: GGGGAAATCTATGAAATCCAAGATAAAGGCATAGTC...GTTCAGACACCCAGTCTCCTCGGAACAGGGGTGAGGGGTCGACTGAGCTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGGACCCTAGTTACTGTTaGGTTTCATCAAAATCAACT +
Preference number: 5 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWEDPSYC*VSSKST
Trigger: AGTTGATTTTGATGAAACCAAACAGTAACTAGGGTC...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCAAGCCCTGTCCGGTGTTaGAGGAACTCGAAGACACAA +
Preference number: 5 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSSPVRC*RNSKTQ
Trigger: TTGTGTCTTCGAGTTCCTCAAACACCGGACAGGGCT...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTGCCCACTGTTGCACCTaGATTTTGCCTTATCTCGCC +
Preference number: 5 (lower is better)
Translates to: GAKINSPWQWDKMLILAPAHCCT*ILPYLA
Trigger: GGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGAACATGGCCCACTGTaGCACCTTGATTTTGCCTTA +
Preference number: 5 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTEHGPL*HLDFAL
Trigger: TAAGGCAAAATCAAGGTGCAACAGTGGGCCATGTTC...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTAAAACCACCCCTGCATaGTCTCTGGGAGGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: STGMHACTSSNDKRQCLSKTTPA*SLGGRR
Trigger: TCTCCTCCCTCCCAGAGACAATGCAGGGGTGGTTTT...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAGAGAAAACCTTCTATaGATGCCGGTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SLKISGQSPGALQKKIGDRENLL*MPVLGL
Trigger: CAAGCCCAGCACCGGCATCAATAGAAGGTTTTCTCT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGTGGATTTGCCATTGTTaGCACGTGGCCCAGGACTTA +
Preference number: 5 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRWICHC*HVAQDL
Trigger: TAAGTCCTGGGCCACGTGCAAACAATGGCAAATCCA...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATATGGAAGAGCTGGATTaGCCATTGTTTGCACGTGGC +
Preference number: 5 (lower is better)
Translates to: PGSCSADLCQATHLTKPNMEELD*PLFARG
Trigger: GCCACGTGCAAACAATGGCAAATCCAGCTCTTCCAT...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATATGGAAGAGCTGGATTaGCCATTGTTTGCACGTGGC +
Preference number: 5 (lower is better)
Translates to: SLKISGQSPGALQKKIGDMEELD*PLFARG
Trigger: GCCACGTGCAAACAATGGCAAATCCAGCTCTTCCAT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGAGCACTGCTGACTGTTaGCTTTCCTCAGCTAAAGCA +
Preference number: 5 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHESTADC*LSSAKA
Trigger: TGCTTTAGCTGAGGAAAGCAAACAGTCAGCAGTGCT...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGGATCTGTGTTATGCTaGCAGGTGTCAGGGGTCAAT +
Preference number: 5 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRGSVLC*QVSGVN
Trigger: ATTGACCCCTGACACCTGCAAGCATAACACAGATCC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGGAGAACCACGCTTTATaGGCGGAGCCTTATGTGCCA +
Preference number: 5 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLENHAL*AEPYVP
Trigger: TGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTC...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACCCCGATCAAGCATGCTaGGCACACCAGGAAGCTAAT +
Preference number: 5 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHPDQAC*AHQEAN
Trigger: ATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGG...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTGTTCTTCCAAGGGTGTaGGCAATAAAGGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTVLPRV*AIKAVA
Trigger: TGCAACAGCCTTTATTGCCAACACCCTTGGAAGAAC...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CCACCCCTGCATTGTCTCTGGGAGGGAGGAGAAGCTCATCAGAGACACTGGGAGCTTCCAAAGTCCATATaGCAAAACTTGTACTTCTAC +
Preference number: 5 (lower is better)
Translates to: PPLHCLWEGGEAHQRHWELPKSI*QNLYFY
Trigger: GTAGAAGTACAAGTTTTGCAATATGGACTTTGGAAG...CTCCCAGTGTCTCTGATGAGCTTCTCCTCCCTCCCAGAGACAATGCAGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS TCA 90 bp GGATCTTTGCTGATGTCCAAGTTCATCTCTCGGGGAGACCGAGTTTaGATCAAATCTGCGTGCGCCCAGCTGTCAAATCTGCAAACCTAT +
Preference number: 5 (lower is better)
Translates to: GSLLMSKFISRGDRV*IKSACAQLSNLQTY
Trigger: ATAGGTTTGCAGATTTGACAGCTGGGCGCACGCAGATTTGATTCAAACTCGGTCTCCCCGAGAGATGAACTTGGACATCAGCAAAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683474.1
ENST00000683792.1
CDS CCA 90 bp GCAGTGGGCTCAGACCACAGCTTGGAGGAGCAGCCATTGATTTTGTaGTTATGTGGCTGGAAGCACCGAGACCTTCTTTTTCATAATTAC +
Preference number: 5 (lower is better)
Translates to: AVGSDHSLEEQPLIL*LCGWKHRDLLFHNY
Trigger: GTAATTATGAAAAAGAAGGTCTCGGTGCTTCCAGCCACATAACCACAAAATCAATGGCTGCTCCTCCAAGCTGTGGTCTGAGCCCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS-3UTR CAA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGGTATTGCCCGACACATaGGATTTCAGCTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQVLPDT*DFSFCA
Trigger: GGCACAGAAGCTGAAATCCAATGTGTCGGGCAATAC...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCAGTATTGCCCGACACATaGGATTTCAGCTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSVLPDT*DFSFCA
Trigger: GGCACAGAAGCTGAAATCCAATGTGTCGGGCAATAC...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGAACCAAGGTACTGGATaGTGTCATGACAAGTGTGTC +
Preference number: 5 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHENQGTG*CHDKCV
Trigger: GACACACTTGTCATGACACAATCCAGTACCTTGGTT...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGACAGTGGCCAAGACGTaGCAGTCAGGAGTAAACACA +
Preference number: 5 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLTVAKT*QSGVNT
Trigger: TGTGTTTACTCCTGACTGCAACGTCTTGGCCACTGT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATCCACAAAGCCCACTCTaGGTAAGAATCTTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: PGSCSADLCQATHLTKPNPQSPL*VRIFFV
Trigger: CACAAAGAAGATTCTTACCAAGAGTGGGCTTTGTGG...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTCAGGGATTGAGGTATaGAATCGGCACACTCATTCC +
Preference number: 5 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLSGIEV*NRHTHS
Trigger: GGAATGAGTGTGCCGATTCAATACCTCAATCCCTGA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGCAATCAAAGCTGCCTTaGTCAGATAACCTGAAAACC +
Preference number: 5 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHEQSKLP*SDNLKT
Trigger: GGTTTTCAGGTTATCTGACAAAGGCAGCTTTGATTG...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGCCTCTTTACTTAATGTaGGAGAAAAGTGGCCACCAG +
Preference number: 5 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRPLYLM*EKSGHQ
Trigger: CTGGTGGCCACTTTTCTCCAACATTAAGTAAAGAGG...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCGAGCTGGATTTGCCATaGTTTGCACGTGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISELDLP*FARGPG
Trigger: TCCTGGGCCACGTGCAAACAATGGCAAATCCAGCTC...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGCAGGGCAAACTGATTaGGTTCTGCGATTTCCATTC +
Preference number: 5 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHAGQTD*VLRFPF
Trigger: GAATGGAAATCGCAGAACCAAATCAGTTTGCCCTGC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTAGGCAGTTGTTCCCTTaGGGAATGTGCTCCACTGAT +
Preference number: 5 (lower is better)
Translates to: STGMHACTSSNDKRQCLSRQLFP*GMCSTD
Trigger: ATCAGTGGAGCACATTCCCAAAGGGAACAACTGCCT...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369236.5
CDS TCA 90 bp GTCAAAGAATCGATGAAGACACAGCCCACTTCTGGTATGTCAGGATaGGATCAGCAGGCAAAGAAGCCAGGGAGTAGGAGAATCTATATG +
Preference number: 5 (lower is better)
Translates to: VKESMKTQPTSGMSG*DQQAKKPGSRRIYM
Trigger: CATATAGATTCTCCTACTCCCTGGCTTCTTTGCCTGCTGATCTCATCCTGACATACCAGAAGTGGGCTGTGTCTTCATCGATTCTTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490345.2
CDS-3UTR CAA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCGCCGACCTGTACTTCTaGCAAATGTCGTCGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISADLYF*QMSSRL
Trigger: CAACCTCGACGACATTTGCAAGAAGTACAGGTCGGC...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCACGGTTGCAGACATCGTaGGACACGCTGGTGGTGCAC +
Preference number: 5 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSRLQTS*DTLVVH
Trigger: GTGCACCACCAGCGTGTCCAACGATGTCTGCAACCG...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACTGCAAATTCAAACAGTaGGGCTTCTCCCTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHCKFKQ*GFSLSS
Trigger: TGAAGAGAGGGAGAAGCCCAACTGTTTGAATTTGCA...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTGCAAATTCAAACAGTaGGGCTTCTCCCTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLCKFKQ*GFSLSS
Trigger: TGAAGAGAGGGAGAAGCCCAACTGTTTGAATTTGCA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCAATACAGAGGTGTGTATaGCCCGACACATTGGATTTC +
Preference number: 5 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSIQRCV*PDTLDF
Trigger: GAAATCCAATGTGTCGGGCAATACACACCTCTGTAT...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TTCCTCCTGCCTGTCCACAGTCACATGATGCAGAACTTTCTGCTACAGCACGAGTCCCCACTCTCTATTTaGACGAAAAGACAGATACTA +
Preference number: 5 (lower is better)
Translates to: FLLPVHSHMMQNFLLQHESPLSI*TKRQIL
Trigger: TAGTATCTGTCTTTTCGTCAAAATAGAGAGTGGGGA...CTCGTGCTGTAGCAGAAAGTTCTGCATCATGTGACTGTGGACAGGCAGGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTAGCTATATTGGACTTTaGTTAGGTAAAGGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: AHCCTLILPYLANSPSSGSYIGL*LGKGLL
Trigger: GAGAAGCCCTTTACCTAACAAAAGTCCAATATAGCT...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTAACCAAGGTACTGGATaGTGTCATGACAAGTGTGTC +
Preference number: 5 (lower is better)
Translates to: GAKINSPWQWDKMLILAPNQGTG*CHDKCV
Trigger: GACACACTTGTCATGACACAATCCAGTACCTTGGTT...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGCTTGCTTGGCTTGCTTaGATAAGAATCTCTCTAACG +
Preference number: 5 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRLAWLA*IRISLT
Trigger: CGTTAGAGAGATTCTTATCAAAGCAAGCCAAGCAAG...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACTGGCGGAAACCTTGCTaGGCTTGCTTTGATAAGAAT +
Preference number: 5 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHWRKPC*ACFDKN
Trigger: ATTCTTATCAAAGCAAGCCAAGCAAGGTTTCCGCCA...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATCTGGTCCACAGTTTATaGATTCAAGTACATCGTGCA +
Preference number: 5 (lower is better)
Translates to: PGSCSADLCQATHLTKPNLVHSL*IQVHRA
Trigger: TGCACGATGTACTTGAATCAATAAACTGTGGACCAG...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCAATTCTCTCCTGCCTGTaGTCATTGCTTTTAGGTCGT +
Preference number: 5 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSILSCL*SLLLGR
Trigger: ACGACCTAAAAGCAATGACAACAGGCAGGAGAGAAT...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACTGTTGCACCTTGATTTaGCCTTATCTCGCCAACTCT +
Preference number: 5 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHCCTLI*PYLANS
Trigger: AGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACA...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCCAGATCCATTCACCCTaGGAACATGGCCCACTGTTG +
Preference number: 5 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISQIHSP*EHGPLL
Trigger: CAACAGTGGGCCATGTTCCAAGGGTGAATGGATCTG...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGGAGGAACTTCGTATTaGGGGATTAGCATCATCTTC +
Preference number: 5 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHGGTSY*GISIIF
Trigger: GAAGATGATGCTAATCCCCAAATACGAAGTTCCTCC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTCCAATAGGCCAGTTCTaGCTACCGTATGACAGAATA +
Preference number: 5 (lower is better)
Translates to: GAKINSPWQWDKMLILAPPIGQF*LPYDRI
Trigger: TATTCTGTCATACGGTAGCAAGAACTGGCCTATTGG...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCAGTCAGCATCCTGTGCTaGAGGCAGATTAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSVSILC*RQIKIS
Trigger: TGAGATTTTAATCTGCCTCAAGCACAGGATGCTGAC...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGCTCAGTAAACACACAATATAACATGGAGACCCGCCCGAAGCCTAACTGGAGGGGTAAGCATTTGATGTaGCTTCTCAGGATACTGATG +
Preference number: 5 (lower is better)
Translates to: SSVNTQYNMETRPKPNWRGKHLM*LLRILM
Trigger: CATCAGTATCCTGAGAAGCAACATCAAATGCTTACC...CCTCCAGTTAGGCTTCGGGCGGGTCTCCATGTTATATTGTGTGTTTACTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTAGCACTGCTGACTGTTaGCTTTCCTCAGCTAAAGCA +
Preference number: 5 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCSTADC*LSSAKA
Trigger: TGCTTTAGCTGAGGAAAGCAAACAGTCAGCAGTGCT...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS CCA 90 bp GTCCGACCCAACTTCATAAGCAGCAGCAGTACTGGGGGTTGTAGTTaGAAGGATAATGATGATGATGATGATGATGATGATGATGATGCC +
Preference number: 5 (lower is better)
Translates to: VRPNFISSSSTGGCS*KDNDDDDDDDDDDA
Trigger: GGCATCATCATCATCATCATCATCATCATCATCATTATCCTTCCAACTACAACCCCCAGTACTGCTGCTGCTTATGAAGTTGGGTCGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490345.2
CDS CCA 90 bp GTTTTGAAATCATTTCTGGTCTGGTCTGGCCCCATCTGGAACAAATaGACTTTGGATCTGAGGAGATACTGTAAATTTGCACACGGTGGC +
Preference number: 5 (lower is better)
Translates to: VLKSFLVWSGPIWNK*TLDLRRYCKFAHGG
Trigger: GCCACCGTGTGCAAATTTACAGTATCTCCTCAGATCCAAAGTCCATTTGTTCCAGATGGGGCCAGACCAGACCAGAAATGATTTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682489.1
CDS-3UTR CAA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTATACAGAGGTGTGTATaGCCCGACACATTGGATTTC +
Preference number: 5 (lower is better)
Translates to: STGMHACTSSNDKRQCLSIQRCV*PDTLDF
Trigger: GAAATCCAATGTGTCGGGCAATACACACCTCTGTAT...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TGCCTGATTCAAGGAACTCTGGCTGTTTCGTTAGAAGGTCCCTGTTCTGATCAGCAATCAAAGCTGCCTTaGTCAGATAACCTGAAAACC +
Preference number: 5 (lower is better)
Translates to: CLIQGTLAVSLEGPCSDQQSKLP*SDNLKT
Trigger: GGTTTTCAGGTTATCTGACAAAGGCAGCTTTGATTG...CTGATCAGAACAGGGACCTTCTAACGAAACAGCCAGAGTTCCTTGAATCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GTAAGGAACATCAGCGGACTCTCAGATCCATTCACCCTTGGAACATGGCCCACTAGAAAAATGAGATATTaGTTGGTGACAGATGAGGCT +
Preference number: 5 (lower is better)
Translates to: VRNISGLSDPFTLGTWPTRKMRY*LVTDEA
Trigger: AGCCTCATCTGTCACCAACAAATATCTCATTTTTCT...AGTGGGCCATGTTCCAAGGGTGAATGGATCTGAGAGTCCGCTGATGTTCCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGAATCTCTCTAACGTGTaGTCCCTGAACAAGATGCTT +
Preference number: 5 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLNLSNV*SLNKML
Trigger: AAGCATCTTGTTCAGGGACAACACGTTAGAGAGATT...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GGAGCAAAAATTAACTCCCCATGGCAGTGGGACAAGATGCTGATATTGGCACCTCTTGCTTGGCTTGCTTaGATAAGAATCTCTCTAACG +
Preference number: 5 (lower is better)
Translates to: GAKINSPWQWDKMLILAPLAWLA*IRISLT
Trigger: CGTTAGAGAGATTCTTATCAAAGCAAGCCAAGCAAG...AGGTGCCAATATCAGCATCTTGTCCCACTGCCATGGGGAGTTAATTTTTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CCAGGGTCCTGTTCTGCTGATCTGTGCCAAGCAACTCATCTCACCAAACCTAATAGTAGCGAATCATTTTaGCTTTTAAGCACGCCAAGA +
Preference number: 5 (lower is better)
Translates to: PGSCSADLCQATHLTKPNSSESF*LLSTPR
Trigger: TCTTGGCGTGCTTAAAAGCAAAAATGATTCGCTACT...ATTAGGTTTGGTGAGATGAGTTGCTTGGCACAGATCAGCAGAACAGGACCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTTGTTGCACCTTGATTTaGCCTTATCTCGCCAACTCT +
Preference number: 5 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCCCTLI*PYLANS
Trigger: AGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACA...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp ATGCCCAATGACAGACCACAGCCAAATATGGCAGGGCAAACTGATTTGGTTCTGTATTACGATGAAGAATaGGGGAGGGCAATACTTAGG +
Preference number: 5 (lower is better)
Translates to: MPNDRPQPNMAGQTDLVLYYDEE*GRAILR
Trigger: CCTAAGTATTGCCCTCCCCAATTCTTCATCGTAATA...CAGAACCAAATCAGTTTGCCCTGCCATATTTGGCTGTGGTCTGTCATTGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGTATTACGATGAAGAATaGGGGAGGGCAATACTTAGG +
Preference number: 5 (lower is better)
Translates to: DAELSATARGFSESAFDEYYDEE*GRAILR
Trigger: CCTAAGTATTGCCCTCCCCAATTCTTCATCGTAATA...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCGGATCTGTGTTATGCTaGCAGGTGTCAGGGGTCAAT +
Preference number: 5 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISGSVLC*QVSGVN
Trigger: ATTGACCCCTGACACCTGCAAGCATAACACAGATCC...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GCCCACTGTTGCACCTTGATTTTGCCTTATCTCGCCAACTCTCCAAGCTCAGGTCTTCCAAAGTCCATATaGCAAAACTTGTACTTCTAC +
Preference number: 5 (lower is better)
Translates to: AHCCTLILPYLANSPSSGLPKSI*QNLYFY
Trigger: GTAGAAGTACAAGTTTTGCAATATGGACTTTGGAAG...ACCTGAGCTTGGAGAGTTGGCGAGATAAGGCAAAATCAAGGTGCAACAGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS CCA 90 bp GACCACAGCTTGGAGGAGCAGCCATTGATTTTGTGGTTATGTGGCTaGAAGCACCGAGACCTTCTTTTTCATAATTACCATTGGAAATAC +
Preference number: 5 (lower is better)
Translates to: DHSLEEQPLILWLCG*KHRDLLFHNYHWKY
Trigger: GTATTTCCAATGGTAATTATGAAAAAGAAGGTCTCGGTGCTTCCAGCCACATAACCACAAAATCAATGGCTGCTCCTCCAAGCTGTGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS-3UTR CAA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACGCCATTGCCAAAGGCTaGAATTGCATTTTTAAGACA +
Preference number: 5 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHAIAKG*NCIFKT
Trigger: TGTCTTAAAAATGCAATTCAAGCCTTTGGCAATGGC...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCATCTCAGAGTCTGCTTTaGATGAGCTGTATTTGTGAA +
Preference number: 5 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSSQSLL*MSCICE
Trigger: TTCACAAATACAGCTCATCAAAAGCAGACTCTGAGA...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAGAAAAATGAGATATTaGTTGGTGACAGATGAGGCT +
Preference number: 5 (lower is better)
Translates to: SLKISGQSPGALQKKIGDRKMRY*LVTDEA
Trigger: AGCCTCATCTGTCACCAACAAATATCTCATTTTTCT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CACACCAGGAAGCTAATGCTGGATCATATAGCCCTCCAATCATTGTGTGTGTGTAATCTCTCTAACGTGTaGTCCCTGAACAAGATGCTT +
Preference number: 5 (lower is better)
Translates to: HTRKLMLDHIALQSLCVCNLSNV*SLNKML
Trigger: AAGCATCTTGTTCAGGGACAACACGTTAGAGAGATT...ACACACACACAATGATTGGAGGGCTATATGATCCAGCATTAGCTTCCTGGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGTCTAAAGATCTCTGGCCAGTCTCCTGGCGCCCTACAGAAGAAAATTGGGGATAATTCCTTCTCTATATaGTGTGCTTCTTCCTTCATG +
Preference number: 5 (lower is better)
Translates to: SLKISGQSPGALQKKIGDNSFSI*CASSFM
Trigger: CATGAAGGAAGAAGCACACAATATAGAGAAGGAATT...ATCCCCAATTTTCTTCTGTAGGGCGCCAGGAGACTGGCCAGAGATCTTTAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAGGAGGAACTTCGTATTaGGGGATTAGCATCATCTTC +
Preference number: 5 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIGGTSY*GISIIF
Trigger: GAAGATGATGCTAATCCCCAAATACGAAGTTCCTCC...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATACCAATAGGCCAGTTCTaGCTACCGTATGACAGAATA +
Preference number: 5 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIPIGQF*LPYDRI
Trigger: TATTCTGTCATACGGTAGCAAGAACTGGCCTATTGG...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAGTCAGCATCCTGTGCTaGAGGCAGATTAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIVSILC*RQIKIS
Trigger: TGAGATTTTAATCTGCCTCAAGCACAGGATGCTGAC...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCGTTCTTCCAAGGGTGTaGGCAATAAAGGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISVLPRV*AIKAVA
Trigger: TGCAACAGCCTTTATTGCCAACACCCTTGGAAGAAC...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TCCACAGGTATGCACGCTTGCACTTCGAGCAATGACAAAAGACAATGCTTGTCTGCCATTGCCAAAGGCTaGAATTGCATTTTTAAGACA +
Preference number: 5 (lower is better)
Translates to: STGMHACTSSNDKRQCLSAIAKG*NCIFKT
Trigger: TGTCTTAAAAATGCAATTCAAGCCTTTGGCAATGGC...AGACAAGCATTGTCTTTTGTCATTGCTCGAAGTGCAAGCGTGCATACCTGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTACAGTGGCCAAGACGTaGCAGTCAGGAGTAAACACA +
Preference number: 5 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCTVAKT*QSGVNT
Trigger: TGTGTTTACTCCTGACTGCAACGTCTTGGCCACTGT...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CTGAGTTTGGATGGAGCACTGCATCAGGTTTTTCACAGAAGCCCCAAAGGATCAAATTCCTTCTCTATATaGTGTGCTTCTTCCTTCATG +
Preference number: 5 (lower is better)
Translates to: LSLDGALHQVFHRSPKGSNSFSI*CASSFM
Trigger: CATGAAGGAAGAAGCACACAATATAGAGAAGGAATT...TGATCCTTTGGGGCTTCTGTGAAAAACCTGATGCAGTGCTCCATCCAAACTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAGGTAAGCATTTGATGTaGCTTCTCAGGATACTGATG +
Preference number: 5 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIGKHLM*LLRILM
Trigger: CATCAGTATCCTGAGAAGCAACATCAAATGCTTACC...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAGAGAACCACGCTTTATaGGCGGAGCCTTATGTGCCA +
Preference number: 5 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSENHAL*AEPYVP
Trigger: TGGCACATAAGGCTCCGCCAATAAAGCGTGGTTCTC...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp GATGCAGAACTTTCTGCTACAGCACGAGGCTTCTCAGAGTCTGCTTTTGATGAGTCCATATTGCAAAACTaGTACTTCTACAGGAGATGT +
Preference number: 5 (lower is better)
Translates to: DAELSATARGFSESAFDESILQN*YFYRRC
Trigger: ACATCTCCTGTAGAAGTACAAGTTTTGCAATATGGA...CTCATCAAAAGCAGACTCTGAGAAGCCTCGTGCTGTAGCAGAAAGTTCTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CATCTCTTTTCCCAGGCACTTTACATGGACTCCAAAATGCTTTGGCTCTCCCACTCCATATTGCAAAACTaGTACTTCTACAGGAGATGT +
Preference number: 5 (lower is better)
Translates to: HLFSQALYMDSKMLWLSHSILQN*YFYRRC
Trigger: ACATCTCCTGTAGAAGTACAAGTTTTGCAATATGGA...GTGGGAGAGCCAAAGCATTTTGGAGTCCATGTAAAGTGCCTGGGAAAAGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS GCA 90 bp GACCTTCTTTTTCATAATTACCATTGGAAATACAGAGGTGTGTATTaGCCGACACATTGGATTTCAGCTTCTGTGCCCCCACAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: DLLFHNYHWKYRGVY*PTHWISASVPPQRR
Trigger: TCTTCTTTGTGGGGGCACAGAAGCTGAAATCCAATGTGTCGGGCAATACACACCTCTGTATTTCCAATGGTAATTATGAAAAAGAAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000682489.1
CDS-3UTR CAA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTGAGCAGCCATTGATTTaGTGGTTATGTGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCEQPLI*WLCGWK
Trigger: CTTCCAGCCACATAACCACAAAATCAATGGCTGCTC...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTTCAGGGATTGAGGTATaGAATCGGCACACTCATTCC +
Preference number: 5 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCSGIEV*NRHTHS
Trigger: GGAATGAGTGTGCCGATTCAATACCTCAATCCCTGA...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AAATTCCCGATCAAGCATGCTTGGCACACCAGGAAGCTAATGCTGGATCATATAGACTATGCCTTTATCTaGGATTTCATAGATTTCCCC +
Preference number: 5 (lower is better)
Translates to: KFPIKHAWHTRKLMLDHIDYAFI*DFIDFP
Trigger: GGGGAAATCTATGAAATCCAAGATAAAGGCATAGTC...TATATGATCCAGCATTAGCTTCCTGGTGTGCCAAGCATGCTTGATCGGGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCATTGGAGGAGCAGCCATaGATTTTGTGGTTATGTGGC +
Preference number: 5 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSLEEQP*ILWLCG
Trigger: GCCACATAACCACAAAATCAATGGCTGCTCCTCCAA...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTCTAATGTCAACCCTCTaGATCCACAAACCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCLMSTL*IHKPSF
Trigger: GAAGGAAGGTTTGTGGATCAAGAGGGTTGACATTAG...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS GCA 90 bp GACCTTCTTTTTCATAATTACCATTGGAAATACAGAGGTGTGTATTaGCCGACACATTGGATTTCAGCTTCTGTGCCTGTAAATTTGCAC +
Preference number: 5 (lower is better)
Translates to: DLLFHNYHWKYRGVY*PTHWISASVPVNLH
Trigger: GTGCAAATTTACAGGCACAGAAGCTGAAATCCAATGTGTCGGGCAATACACACCTCTGTATTTCCAATGGTAATTATGAAAAAGAAGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS-3UTR CAA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTGAGCAGCCATTGATTTaGTGGTTATGTGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TGISAIQENRKQITWFLSEQPLI*WLCGWK
Trigger: CTTCCAGCCACATAACCACAAAATCAATGGCTGCTC...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTAAACACAGCCCCAGTTaGCTTTACAGCCCAAGTTAC +
Preference number: 5 (lower is better)
Translates to: TGISAIQENRKQITWFLSKHSPS*LYSPSY
Trigger: GTAACTTGGGCTGTAAAGCAAACTGGGGCTGTGTTT...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCATGGCGGAAACCTTGCTaGGCTTGCTTTGATAAGAAT +
Preference number: 5 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSWRKPC*ACFDKN
Trigger: ATTCTTATCAAAGCAAGCCAAGCAAGGTTTCCGCCA...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp CTCTCTAACGTGTTGTCCCTGAACAAGATGCTTCCCCCTATTTATTTAATCAGCGACCCTAGTTACTGTTaGGTTTCATCAAAATCAACT +
Preference number: 5 (lower is better)
Translates to: LSNVLSLNKMLPPIYLISDPSYC*VSSKST
Trigger: AGTTGATTTTGATGAAACCAAACAGTAACTAGGGTC...GCTGATTAAATAAATAGGGGGAAGCATCTTGTTCAGGGACAACACGTTAGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTGCTTTTAGGTCGTTCTaGAAAAGATGGGTGTCACAT +
Preference number: 5 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCAFRSF*KRWVSH
Trigger: ATGTGACACCCATCTTTTCAAGAACGACCTAAAAGC...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp AGGAACTCGAAGACACAACTTCTAAGACATTCTTACTACAGCACAAAAGTCTGTTCCCCACTCTCTATTTaGACGAAAAGACAGATACTA +
Preference number: 5 (lower is better)
Translates to: RNSKTQLLRHSYYSTKVCSPLSI*TKRQIL
Trigger: TAGTATCTGTCTTTTCGTCAAAATAGAGAGTGGGGA...ACAGACTTTTGTGCTGTAGTAAGAATGTCTTAGAAGTTGTGTCTTCGAGTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp ACTGGAATTTCAGCTATACAAGAGAACAGGAAACAGATAACTTGGTTTTTGTCTATTCTCTCCTGCCTGTaGTCATTGCTTTTAGGTCGT +
Preference number: 5 (lower is better)
Translates to: TGISAIQENRKQITWFLSILSCL*SLLLGR
Trigger: ACGACCTAAAAGCAATGACAACAGGCAGGAGAGAAT...AGACAAAAACCAAGTTATCTGTTTCCTGTTCTCTTGTATAGCTGAAATTCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS-3UTR CAA 90 bp TTCTTGCTACCGTATGACAGAATAAAGCCCTTAAATGTCAAGGCTTTTCATTCAAGTAGCGAATCATTTTaGCTTTTAAGCACGCCAAGA +
Preference number: 5 (lower is better)
Translates to: FLLPYDRIKPLNVKAFHSSSESF*LLSTPR
Trigger: TCTTGGCGTGCTTAAAAGCAAAAATGATTCGCTACT...TGAATGAAAAGCCTTGACATTTAAGGGCTTTATTCTGTCATACGGTAGCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355422.11
ENST00000369236.5
CDS GCA 72 bp CTCCTGGGCGTCCGCTCCTCTCACACTCTCGCCCGGTaGCCAGGACTCGGGCGCTTCCGCACCCCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: LLGVRSSHTLAR*PGLGRFRTPAQ
Trigger: CTGGGCTGGGGTGCGGAAGCGCCCGAGTCCTGGGCACCGGGCGAGAGTGTGAGAGGAGCGGACGCCCAGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369234.5
ENST00000439649.8
ENST00000682194.1
CDS GCA 72 bp CGAGCCGCCGCTGGGTCTTGCCGAGGGAGCTCAGCGTaGAGCGATCCCCGGACAGCTGTGCTGCTCTGGCCG +
Preference number: 6 (lower is better)
Translates to: RAAAGSCRGSSA*SDPRTAVLLWP
Trigger: CGGCCAGAGCAGCACAGCTGTCCGGGGATCGCTGCACGCTGAGCTCCCTCGGCAAGACCCAGCGGCGGCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS GCA 72 bp GTCCGACCCAACTTTCCGAGCGTCGCGAGCGGAGCCTaGAGCTGCCTGGAGTCCGAGCCCTCGGTGGCGGCG +
Preference number: 6 (lower is better)
Translates to: VRPNFPSVASGA*SCLESEPSVAA
Trigger: CGCCGCCACCGAGGGCTCGGACTCCAGGCAGCTGCAGGCTCCGCTCGCGACGCTCGGAAAGTTGGGTCGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684105.1
CDS GCA 72 bp GGCGCTGCGGCACTCATCCTTGGCCTCCAGGCCGGATaGCAGGCTGAAGTTGGTCTCCTTGCCCGCCACGCA +
Preference number: 6 (lower is better)
Translates to: GAAALILGLQAG*QAEVGLLARHA
Trigger: TGCGTGGCGGGCAAGGAGACCAACTTCAGCCTGGCATCCGGCCTGGAGGCCAAGGATGAGTGCCGCAGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS GCA 72 bp GAGGGAGCTCAGCGTGCAGCGATCCCCGGACAGCTGTaGTGCTCTGGCCGCCCAAAGTTCAGCTCCATCCAG +
Preference number: 6 (lower is better)
Translates to: EGAQRAAIPGQL*CSGRPKFSSIQ
Trigger: CTGGATGGAGCTGAACTTTGGGCGGCCAGAGCAGCACAGCTGTCCGGGGATCGCTGCACGCTGAGCTCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS CCA 72 bp GGCAGTTGTAGAGCGACTTCTGCTTCAGGGCCTCCATaGCGCTGCGGCACTCATCCTTGGCCTCCAGGCCGG +
Preference number: 6 (lower is better)
Translates to: GSCRATSASGPP*RCGTHPWPPGR
Trigger: CCGGCCTGGAGGCCAAGGATGAGTGCCGCAGCGCCATGGAGGCCCTGAAGCAGAAGTCGCTCTACAACTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS CCA 72 bp CGCGGAGAATGGCGTGTTCCGAGGCCAGATTTCTTCTaGCCAGAGGACCCTCGGCCTGCTCCTGTTCCCGCC +
Preference number: 6 (lower is better)
Translates to: RGEWRVPRPDFF*PEDPRPAPVPA
Trigger: GGCGGGAACAGGAGCAGGCCGAGGGTCCTCTGGCCAGAAGAAATCTGGCCTCGGAACACGCCATTCTCCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682743.1
CDS CAA 72 bp GCCTCCAGGCCGGATGCCAGGCTGAAGTTGGTCTCCTaGCCCGCCACGCACTGCCTTAGCGTGCGGTACTTG +
Preference number: 6 (lower is better)
Translates to: ASRPDARLKLVS*PATHCLSVRYL
Trigger: CAAGTACCGCACGCTAAGGCAGTGCGTGGCGGGCAAGGAGACCAACTTCAGCCTGGCATCCGGCCTGGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS CAA 72 bp TGCTTCAGGGCCTCCATGGCGCTGCGGCACTCATCCTaGGCCTCCAGGCCGGATGCCAGGCTGAAGTTGGTC +
Preference number: 6 (lower is better)
Translates to: CFRASMALRHSS*ASRPDARLKLV
Trigger: GACCAACTTCAGCCTGGCATCCGGCCTGGAGGCCAAGGATGAGTGCCGCAGCGCCATGGAGGCCCTGAAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS CAA 90 bp CTGCGGCACTCATCCTTGGCCTCCAGGCCGGATGCCAGGCTGAAGTaGGTCTCCTTGCCCGCCACGCACTGCCTTAGCGTGCGGTACTTG +
Preference number: 6 (lower is better)
Translates to: LRHSSLASRPDARLK*VSLPATHCLSVRYL
Trigger: CAAGTACCGCACGCTAAGGCAGTGCGTGGCGGGCAAGGAGACCAACTTCAGCCTGGCATCCGGCCTGGAGGCCAAGGATGAGTGCCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS CAA 90 bp AGCGACTTCTGCTTCAGGGCCTCCATGGCGCTGCGGCACTCATCCTaGGCCTCCAGGCCGGATGCCAGGCTGAAGTTGGTCTCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: SDFCFRASMALRHSS*ASRPDARLKLVSLP
Trigger: GGGCAAGGAGACCAACTTCAGCCTGGCATCCGGCCTGGAGGCCAAGGATGAGTGCCGCAGCGCCATGGAGGCCCTGAAGCAGAAGTCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS TCA 72 bp GGCACTCATCCTTGGCCTCCAGGCCGGATGCCAGGCTaGAGTTGGTCTCCTTGCCCGCCACGCACTGCCTTA +
Preference number: 6 (lower is better)
Translates to: GTHPWPPGRMPG*SWSPCPPRTAL
Trigger: TAAGGCAGTGCGTGGCGGGCAAGGAGACCAACTTCAGCCTGGCATCCGGCCTGGAGGCCAAGGATGAGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS GCA 72 bp GCCAGGCTGAAGTTGGTCTCCTTGCCCGCCACGCACTaGCTTAGCGTGCGGTACTTGGTGCTGCAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: ARLKLVSLPATH*LSVRYLVLQLC
Trigger: GCAGAGCTGCAGCACCAAGTACCGCACGCTAAGGCAGTGCGTGGCGGGCAAGGAGACCAACTTCAGCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS CAA 72 bp TCATCCTTGGCCTCCAGGCCGGATGCCAGGCTGAAGTaGGTCTCCTTGCCCGCCACGCACTGCCTTAGCGTG +
Preference number: 6 (lower is better)
Translates to: SSLASRPDARLK*VSLPATHCLSV
Trigger: CACGCTAAGGCAGTGCGTGGCGGGCAAGGAGACCAACTTCAGCCTGGCATCCGGCCTGGAGGCCAAGGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS CAA 90 bp TCATCCTTGGCCTCCAGGCCGGATGCCAGGCTGAAGTTGGTCTCCTaGCCCGCCACGCACTGCCTTAGCGTGCGGTACTTGGTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SSLASRPDARLKLVS*PATHCLSVRYLVLQ
Trigger: CTGCAGCACCAAGTACCGCACGCTAAGGCAGTGCGTGGCGGGCAAGGAGACCAACTTCAGCCTGGCATCCGGCCTGGAGGCCAAGGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS GCA 72 bp TGCCCGCCACGCACTGCCTTAGCGTGCGGTACTTGGTaGTGCAGCTCTGCTCCTTCAGGCACTGATCACTGG +
Preference number: 6 (lower is better)
Translates to: CPPRTALACGTW*CSSAPSGTDHW
Trigger: CCAGTGATCAGTGCCTGAAGGAGCAGAGCTGCAGCACCAAGTACCGCACGCTAAGGCAGTGCGTGGCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS TCA 72 bp TGCTGCTCTGGCCGCCCAAAGTTCAGCTCCATCCAGTaGAAGAGGAAACTCCGGGTCTGGCAGCAGCCACCG +
Preference number: 6 (lower is better)
Translates to: CCSGRPKFSSIQ*KRKLRVWQQPP
Trigger: CGGTGGCTGCTGCCAGACCCGGAGTTTCCTCTTTCACTGGATGGAGCTGAACTTTGGGCGGCCAGAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS GCA 72 bp CCGCCACGCACTGCCTTAGCGTGCGGTACTTGGTGCTaGAGCTCTGCTCCTTCAGGCACTGATCACTGGCTT +
Preference number: 6 (lower is better)
Translates to: PPRTALACGTWC*SSAPSGTDHWL
Trigger: AAGCCAGTGATCAGTGCCTGAAGGAGCAGAGCTGCAGCACCAAGTACCGCACGCTAAGGCAGTGCGTGGCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS CCA 72 bp TCAGCGTGCAGCGATCCCCGGACAGCTGTGCTGCTCTaGCCGCCCAAAGTTCAGCTCCATCCAGTGAAAGAG +
Preference number: 6 (lower is better)
Translates to: SACSDPRTAVLL*PPKVQLHPVKE
Trigger: CTCTTTCACTGGATGGAGCTGAACTTTGGGCGGCCAGAGCAGCACAGCTGTCCGGGGATCGCTGCACGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS CCA 72 bp TGGTGCTGCAGCTCTGCTCCTTCAGGCACTGATCACTaGCTTTCACGCAATCCAGGCGGTCTCCGCCGCTCA +
Preference number: 6 (lower is better)
Translates to: WCCSSAPSGTDH*LSRNPGGLRRS
Trigger: TGAGCGGCGGAGACCGCCTGGATTGCGTGAAAGCCAGTGATCAGTGCCTGAAGGAGCAGAGCTGCAGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000490345.2
ENST00000682194.1
ENST00000682489.1
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
ENST00000684105.1
CDS CCA 72 bp AGATGCGGTAATCTTCGAGAGCTCGAAGGGCCGAGTTaGGCCAGGACGATTTCCGAGCAGAGCCCTCGGCTC +
Preference number: 6 (lower is better)
Translates to: RCGNLRELEGPS*ARTISEQSPRL
Trigger: GAGCCGAGGGCTCTGCTCGGAAATCGTCCTGGCCCAACTCGGCCCTTCGAGCTCTCGAAGATTACCGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682743.1
CDS GCA 72 bp GTAGTGGCAGTGGTGGTCTGTACTGGGAAGGCTGGCTaGCACACGGTCACATCGGAGCCATTGCCAAAGGCT +
Preference number: 6 (lower is better)
Translates to: VVAVVVCTGKAG*HTVTSEPLPKA
Trigger: AGCCTTTGGCAATGGCTCCGATGTGACCGTGTGGCAGCCAGCCTTCCCAGTACAGACCACCACTGCCACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS GCA 72 bp CTGGGTCGGGAGACCGGTCTAGGAGCCAGCCGGCAGTaGTCGGGATCTTTGCTGATGTCCAAGTTCATCTCT +
Preference number: 6 (lower is better)
Translates to: LGRETGLGASRQ*SGSLLMSKFIS
Trigger: AGAGATGAACTTGGACATCAGCAAAGATCCCGAGCACTGCCGGCTGGCTCCTAGACCGGTCTCCCGACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683474.1
ENST00000683792.1
CDS CCA 72 bp GGTGGTAGTGGCAGTGGTGGTCTGTACTGGGAAGGCTaGCTGCCACACGGTCACATCGGAGCCATTGCCAAA +
Preference number: 6 (lower is better)
Translates to: GGSGSGGLYWEG*LPHGHIGAIAK
Trigger: TTTGGCAATGGCTCCGATGTGACCGTGTGGCAGCCAGCCTTCCCAGTACAGACCACCACTGCCACTACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS CAA 72 bp ACCGGTCTAGGAGCCAGCCGGCAGTGCTCGGGATCTTaGCTGATGTCCAAGTTCATCTCTCGGGGAGACCGA +
Preference number: 6 (lower is better)
Translates to: TGLGASRQCSGS*LMSKFISRGDR
Trigger: TCGGTCTCCCCGAGAGATGAACTTGGACATCAGCAAAGATCCCGAGCACTGCCGGCTGGCTCCTAGACCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683474.1
ENST00000683792.1
CDS GCA 72 bp GCCAGGACGATTTCCGAGCAGAGCCCTCGGCTCGGATaGTCGTTAGGGATGTTAGTGGTTATTGGAAGCGGC +
Preference number: 6 (lower is better)
Translates to: ARTISEQSPRLG*SLGMLVVIGSG
Trigger: GCCGCTTCCAATAACCACTAACATCCCTAACGAGCATCCGAGCCGAGGGCTCTGCTCGGAAATCGTCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682743.1
CDS CCA 72 bp TCGGCTCGGATGCTCGTTAGGGATGTTAGTGGTTATTaGAAGCGGCGCGGAGAATGGCGTGTTCCGAGGCCA +
Preference number: 6 (lower is better)
Translates to: SARMLVRDVSGY*KRRGEWRVPRP
Trigger: TGGCCTCGGAACACGCCATTCTCCGCGCCGCTTCCAATAACCACTAACATCCCTAACGAGCATCCGAGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682743.1
CDS CAA 90 bp ACAGAGCGGTTACCACCAGGACCAGCAGTGGGCTCAGACCACAGCTaGGAGGAGCAGCCATTGATTTTGTGGTTATGTGGCTGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: TERLPPGPAVGSDHS*EEQPLILWLCGWKH
Trigger: GTGCTTCCAGCCACATAACCACAAAATCAATGGCTGCTCCTCCAAGCTGTGGTCTGAGCCCACTGCTGGTCCTGGTGGTAACCGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS TCA 72 bp TGCAGACATCGTTGGACACGCTGGTGGTGCACGGGGTaGTGTACGCCGACCTGTACTTCTTGCAAATGTCGT +
Preference number: 6 (lower is better)
Translates to: CRHRWTRWWCTG*CTPTCTSCKCR
Trigger: ACGACATTTGCAAGAAGTACAGGTCGGCGTACATCACCCCGTGCACCACCAGCGTGTCCAACGATGTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS TCA 72 bp CAGTGGGCTCAGACCACAGCTTGGAGGAGCAGCCATTaGTTTTGTGGTTATGTGGCTGGAAGCACCGAGACC +
Preference number: 6 (lower is better)
Translates to: QWAQTTAWRSSH*FCGYVAGSTET
Trigger: GGTCTCGGTGCTTCCAGCCACATAACCACAAAATCAATGGCTGCTCCTCCAAGCTGTGGTCTGAGCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS GCA 72 bp TTTGAATCAAATCTGCGTGCGCCCAGCTGTCAAATCTaGAAACCTATCACGCCAGACAATGGGCCGCCGCGG +
Preference number: 6 (lower is better)
Translates to: FESNLRAPSCQI*KPITPDNGPPR
Trigger: CCGCGGCGGCCCATTGTCTGGCGTGATAGGTTTGCAGATTTGACAGCTGGGCGCACGCAGATTTGATTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683792.1
CDS CCA 72 bp AGGGATGTTAGTGGTTATTGGAAGCGGCGCGGAGAATaGCGTGTTCCGAGGCCAGATTTCTTCTGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: RDVSGYWKRRGE*RVPRPDFFWPE
Trigger: CTCTGGCCAGAAGAAATCTGGCCTCGGAACACGCCATTCTCCGCGCCGCTTCCAATAACCACTAACATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682743.1
CDS CCA 72 bp CAGCTGTCAAATCTGCAAACCTATCACGCCAGACAATaGGCCGCCGCGGAGGACAGACAAGAATGGCTCATT +
Preference number: 6 (lower is better)
Translates to: QLSNLQTYHARQ*AAAEDRQEWLI
Trigger: AATGAGCCATTCTTGTCTGTCCTCCGCGGCGGCCCATTGTCTGGCGTGATAGGTTTGCAGATTTGACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683792.1
CDS CAA 72 bp TTACCACCAGGACCAGCAGTGGGCTCAGACCACAGCTaGGAGGAGCAGCCATTGATTTTGTGGTTATGTGGC +
Preference number: 6 (lower is better)
Translates to: LPPGPAVGSDHS*EEQPLILWLCG
Trigger: GCCACATAACCACAAAATCAATGGCTGCTCCTCCAAGCTGTGGTCTGAGCCCACTGCTGGTCCTGGTGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS CAA 90 bp CCAGGACCAGCAGTGGGCTCAGACCACAGCTTGGAGGAGCAGCCATaGATTTTGTGGTTATGTGGCTGGAAGCACCGAGACCTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: PGPAVGSDHSLEEQP*ILWLCGWKHRDLLF
Trigger: AAAAAGAAGGTCTCGGTGCTTCCAGCCACATAACCACAAAATCAATGGCTGCTCCTCCAAGCTGTGGTCTGAGCCCACTGCTGGTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS GCA 72 bp TCCGACCCAACCTGGACTCAACCGACCGCGTCCAGCTaGGGCGAGGAGCCAGTTTGTTTATTTACTTATTTA +
Preference number: 6 (lower is better)
Translates to: SDPTWTQPTASS*GEEPVCLFTYL
Trigger: TAAATAAGTAAATAAACAAACTGGCTCCTCGCCGCAGCTGGACGCGGTCGGTTGAGTCCAGGTTGGGTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000682743.1
ENST00000683474.1
ENST00000683792.1
CDS CCA 72 bp GTGCCTGTAAATTTGCACACGGTGGCAAAACATGAGTaGGAATTTCATTCTCAGACCCTGCTGGCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: VPVNLHTVAKHE*EFHSQTLLAPG
Trigger: CCCTGGGGCCAGCAGGGTCTGAGAATGAAATTCCCACTCATGTTTTGCCACCGTGTGCAAATTTACAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS CAA 72 bp GGCTCAGACCACAGCTTGGAGGAGCAGCCATTGATTTaGTGGTTATGTGGCTGGAAGCACCGAGACCTTCTT +
Preference number: 6 (lower is better)
Translates to: GSDHSLEEQPLI*WLCGWKHRDLL
Trigger: AAGAAGGTCTCGGTGCTTCCAGCCACATAACCACAAAATCAATGGCTGCTCCTCCAAGCTGTGGTCTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS TCA 72 bp CTGATGTCCAAGTTCATCTCTCGGGGAGACCGAGTTTaGATCAAATCTGCGTGCGCCCAGCTGTCAAATCTG +
Preference number: 6 (lower is better)
Translates to: LMSKFISRGDRV*IKSACAQLSNL
Trigger: CAGATTTGACAGCTGGGCGCACGCAGATTTGATTCAAACTCGGTCTCCCCGAGAGATGAACTTGGACATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683474.1
ENST00000683792.1
CDS CAA 72 bp GCTGATGTCCAAGTTCATCTCTCGGGGAGACCGAGTTaGAATCAAATCTGCGTGCGCCCAGCTGTCAAATCT +
Preference number: 6 (lower is better)
Translates to: ADVQVHLSGRPS*NQICVRPAVKS
Trigger: AGATTTGACAGCTGGGCGCACGCAGATTTGATTCAAACTCGGTCTCCCCGAGAGATGAACTTGGACATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683474.1
ENST00000683792.1
CDS CAA 90 bp CCAGCAGTGGGCTCAGACCACAGCTTGGAGGAGCAGCCATTGATTTaGTGGTTATGTGGCTGGAAGCACCGAGACCTTCTTTTTCATAAT +
Preference number: 6 (lower is better)
Translates to: PAVGSDHSLEEQPLI*WLCGWKHRDLLFHN
Trigger: ATTATGAAAAAGAAGGTCTCGGTGCTTCCAGCCACATAACCACAAAATCAATGGCTGCTCCTCCAAGCTGTGGTCTGAGCCCACTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS CAA 90 bp GGGATCTTTGCTGATGTCCAAGTTCATCTCTCGGGGAGACCGAGTTaGAATCAAATCTGCGTGCGCCCAGCTGTCAAATCTGCAAACCTA +
Preference number: 6 (lower is better)
Translates to: GIFADVQVHLSGRPS*NQICVRPAVKSANL
Trigger: TAGGTTTGCAGATTTGACAGCTGGGCGCACGCAGATTTGATTCAAACTCGGTCTCCCCGAGAGATGAACTTGGACATCAGCAAAGATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683474.1
ENST00000683792.1
CDS TCA 72 bp TTCTGTGCCTGTAAATTTGCACACGGTGGCAAAACATaGGTGGGAATTTCATTCTCAGACCCTGCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: FCACKFAHGGKT*VGISFSDPAGP
Trigger: GGGGCCAGCAGGGTCTGAGAATGAAATTCCCACTCATGTTTTGCCACCGTGTGCAAATTTACAGGCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS GCA 72 bp GTTCATCTCTCGGGGAGACCGAGTTTGAATCAAATCTaGGTGCGCCCAGCTGTCAAATCTGCAAACCTATCA +
Preference number: 6 (lower is better)
Translates to: VHLSGRPSLNQI*VRPAVKSANLS
Trigger: TGATAGGTTTGCAGATTTGACAGCTGGGCGCACGCAGATTTGATTCAAACTCGGTCTCCCCGAGAGATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683474.1
ENST00000683792.1
CDS CCA 72 bp GATACTGTAAATTTGCACACGGTGGCAAAACATGAGTaGGAATTTCATTCTCAGACCCTGCTGGCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: DTVNLHTVAKHE*EFHSQTLLAPG
Trigger: CCCTGGGGCCAGCAGGGTCTGAGAATGAAATTCCCACTCATGTTTTGCCACCGTGTGCAAATTTACAGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682489.1
CDS TCA 72 bp AGGAGATACTGTAAATTTGCACACGGTGGCAAAACATaGGTGGGAATTTCATTCTCAGACCCTGCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: RRYCKFAHGGKT*VGISFSDPAGP
Trigger: GGGGCCAGCAGGGTCTGAGAATGAAATTCCCACTCATGTTTTGCCACCGTGTGCAAATTTACAGTATCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682489.1
CDS GCA 72 bp AATCCGCAAGGCGAGATCTGCAGATGTAATTCGTCTTaGAGGAGTCCTGCAAATTCAAACAGTTGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: NPQGEICRCNSS*RSPANSNSWAS
Trigger: AGAAGCCCAACTGTTTGAATTTGCAGGACTCCTGCAAGACGAATTACATCTGCAGATCTCGCCTTGCGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS CCA 72 bp CATTGGAAATACAGAGGTGTGTATTGCCCGACACATTaGATTTCAGCTTCTGTGCCTGTAAATTTGCACACG +
Preference number: 6 (lower is better)
Translates to: HWKYRGVYCPTH*ISASVPVNLHT
Trigger: CGTGTGCAAATTTACAGGCACAGAAGCTGAAATCCAATGTGTCGGGCAATACACACCTCTGTATTTCCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS CCA 72 bp TCATTTCTGGTCTGGTCTGGCCCCATCTGGAACAAATaGACTTTGGATCTGAGGAGATACTGTAAATTTGCA +
Preference number: 6 (lower is better)
Translates to: SFLVWSGPIWNK*TLDLRRYCKFA
Trigger: TGCAAATTTACAGTATCTCCTCAGATCCAAAGTCCATTTGTTCCAGATGGGGCCAGACCAGACCAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682489.1
CDS CCA 72 bp GTTTTGAAATCATTTCTGGTCTGGTCTGGCCCCATCTaGAACAAATGGACTTTGGATCTGAGGAGATACTGT +
Preference number: 6 (lower is better)
Translates to: VLKSFLVWSGPI*NKWTLDLRRYC
Trigger: ACAGTATCTCCTCAGATCCAAAGTCCATTTGTTCCAGATGGGGCCAGACCAGACCAGAAATGATTTCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682489.1
CDS CAA 72 bp CCATTGGAAATACAGAGGTGTGTATTGCCCGACACATaGGATTTCAGCTTCTGTGCCTGTAAATTTGCACAC +
Preference number: 6 (lower is better)
Translates to: PLEIQRCVLPDT*DFSFCACKFAH
Trigger: GTGTGCAAATTTACAGGCACAGAAGCTGAAATCCAATGTGTCGGGCAATACACACCTCTGTATTTCCAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS GCA 72 bp TTTCATAATTACCATTGGAAATACAGAGGTGTGTATTaGCCGACACATTGGATTTCAGCTTCTGTGCCCCCA +
Preference number: 6 (lower is better)
Translates to: FHNYHWKYRGVY*PTHWISASVPP
Trigger: TGGGGGCACAGAAGCTGAAATCCAATGTGTCGGGCAATACACACCTCTGTATTTCCAATGGTAATTATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682489.1
CDS CCA 72 bp TTGGAGGAGCAGCCATTGATTTTGTGGTTATGTGGCTaGAAGCACCGAGACCTTCTTTTTCATAATTACCAT +
Preference number: 6 (lower is better)
Translates to: LEEQPLILWLCG*KHRDLLFHNYH
Trigger: ATGGTAATTATGAAAAAGAAGGTCTCGGTGCTTCCAGCCACATAACCACAAAATCAATGGCTGCTCCTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682489.1
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS GCA 72 bp TTTCATAATTACCATTGGAAATACAGAGGTGTGTATTaGCCGACACATTGGATTTCAGCTTCTGTGCCTGTA +
Preference number: 6 (lower is better)
Translates to: FHNYHWKYRGVY*PTHWISASVPV
Trigger: TACAGGCACAGAAGCTGAAATCCAATGTGTCGGGCAATACACACCTCTGTATTTCCAATGGTAATTATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355422.11
ENST00000369234.5
ENST00000369236.5
ENST00000439649.8
ENST00000682724.1
ENST00000682743.1
ENST00000684105.1
CDS CCA 72 bp AACTTCATAAGCAGCAGCAGTACTGGGGGTTGTAGTTaGAAGGATAATGATGATGATGATGATGATGATGAT +
Preference number: 6 (lower is better)
Translates to: NFISSSSTGGCS*KDNDDDDDDDD
Trigger: ATCATCATCATCATCATCATCATCATTATCCTTCCAACTACAACCCCCAGTACTGCTGCTGCTTATGAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490345.2
CDS CAA 90 bp TGGAAGGATAATGATGATGATGATGATGATGATGATGATGATGCCTaGTTAGTCTCTTGTAGAAGTCAAAGAATCGATGAAGACACAGCC +
Preference number: 6 (lower is better)
Translates to: WKDNDDDDDDDDDDA*LVSCRSQRIDEDTA
Trigger: GGCTGTGTCTTCATCGATTCTTTGACTTCTACAAGAGACTAACAAGGCATCATCATCATCATCATCATCATCATCATCATTATCCTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490345.2
CDS CAA 72 bp AATGATGATGATGATGATGATGATGATGATGATGCCTaGTTAGTCTCTTGTAGAAGTCAAAGAATCGATGAA +
Preference number: 6 (lower is better)
Translates to: NDDDDDDDDDDA*LVSCRSQRIDE
Trigger: TTCATCGATTCTTTGACTTCTACAAGAGACTAACAAGGCATCATCATCATCATCATCATCATCATCATCATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490345.2