RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GFOD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000141098

Ensembl transcript IDs: ENST00000268797.12, ENST00000602279.2, ENST00000602377.1, ENST00000602496.1, ENST00000602522.1, ENST00000602627.1, ENST00000602855.2

Found 578 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACCACGCTCTGCATGTACAGCCCATCCTCGAAGGAGGCGGCCATaGAGACAGGGGTGCGGTCCCAGGTGCGGCGGTCGCCCTGCCCCT +
Preference number: 1 (lower is better)
Translates to: PPRSACTAHPRRRRP*RQGCGPRCGGRPAP
Trigger: AGGGGCAGGGCGACCGCCGCACCTGGGACCGCACCCCTGTCTCCATGGCCGCCTCCTTCGAGGATGGGCTGTACATGCAGAGCGTGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR TCA 90 bp GGGTGGCCAGGCCCTTGCACGGGGCCCGGCAGGGAGAGTAGCCCCTaGCTGCTAGCACTACTGCTTCTGGAGGGTCTCCAGTGCTTCTCC +
Preference number: 1 (lower is better)
Translates to: GWPGPCTGPGRESSP*LLALLLLEGLQCFS
Trigger: GGAGAAGCACTGGAGACCCTCCAGAAGCAGTAGTGCTAGCAGTCAGGGGCTACTCTCCCTGCCGGGCCCCGTGCAAGGGCCTGGCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR TCA 90 bp CGTGCCGGATGCCACGGATGGCAGCGTTCTGCCTCACGAATGTCTTaGGCAGCCCGTGCACCTTCTCGGCTCTCCGGCCGGTCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: RAGCHGWQRSASRMS*AARAPSRLSGRSGG
Trigger: CCCACCTGACCGGCCGGAGAGCCGAGAAGGTGCACGGGCTGCTCAAGACATTCGTGAGGCAGAACGCTGCCATCCGTGGCATCCGGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR GCA 90 bp CAGCGGGACATCCTGGGGCCCCTGCTCAGGCAGTCCTGCGCCCACTaGCAGCGAGTCCCTCAAGAGCAGCTCCTCTTGCGTGGCAGAGTT +
Preference number: 1 (lower is better)
Translates to: QRDILGPLLRQSCAH*QRVPQEQLLLRGRV
Trigger: AACTCTGCCACGCAAGAGGAGCTGCTCTTGAGGGACTCGCTGGCAGTGGGCGCAGGACTGCCTGAGCAGGGGCCCCAGGATGTCCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR CCA 90 bp CTGCGCCCACTGCCAGCGAGTCCCTCAAGAGCAGCTCCTCTTGCGTaGCAGAGTTCTTCTGCCCATAGAGGTCGGCTCCCCGGGCGACGA +
Preference number: 1 (lower is better)
Translates to: LRPLPASPSRAAPLA*QSSSAHRGRLPGRR
Trigger: TCGTCGCCCGGGGAGCCGACCTCTATGGGCAGAAGAACTCTGCCACGCAAGAGGAGCTGCTCTTGAGGGACTCGCTGGCAGTGGGCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR TCA 90 bp CTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTaGGCCTTTCCTGGTCCGACTCACTGGCATCACCATGAGGAGGCC +
Preference number: 1 (lower is better)
Translates to: LTLLGLRIRLKGSPG*AFPGPTHWHHHEEA
Trigger: GGCCTCCTCATGGTGATGCCAGTGAGTCGGACCAGGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR TCA 90 bp TCAGCACCTCCACAGCCTCCCACTCCCCGGATCGGCTCGACCTCTTaGTGGCATCCACCACGCTCTGCATGTACAGCCCATCCTCGAAGG +
Preference number: 1 (lower is better)
Translates to: SAPPQPPTPRIGSTS*WHPPRSACTAHPRR
Trigger: CCTTCGAGGATGGGCTGTACATGCAGAGCGTGGTGGATGCCATCAAGAGGTCGAGCCGATCCGGGGAGTGGGAGGCTGTGGAGGTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR GCA 90 bp GTTCTTCTGCCCATAGAGGTCGGCTCCCCGGGCGACGAGGCGTCCTaGAGAGCCTACCACCATGACTTCATGCACAAAGGCGCCTGGCAT +
Preference number: 1 (lower is better)
Translates to: VLLPIEVGSPGDEAS*RAYHHDFMHKGAWH
Trigger: ATGCCAGGCGCCTTTGTGCATGAAGTCATGGTGGTAGGCTCTGCAGGACGCCTCGTCGCCCGGGGAGCCGACCTCTATGGGCAGAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR GCA 90 bp GGTCCGACTCACTGGCATCACCATGAGGAGGCCTGGCGGCAGCTCTaGCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGCCA +
Preference number: 1 (lower is better)
Translates to: GPTHWHHHEEAWRQL*PVHTVVTWQQEHLP
Trigger: TGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGCCGCCAGGCCTCCTCATGGTGATGCCAGTGAGTCGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR TCA 90 bp CCTGGCAACAGGAACATTTGCCACCCTGCAAGTCTGAGGAGCAGATaGGCCACTGGAGGGGGCGAAGTCCCAGAGCCACCTCTGGCTTCA +
Preference number: 1 (lower is better)
Translates to: PGNRNICHPASLRSR*ATGGGEVPEPPLAS
Trigger: TGAAGCCAGAGGTGGCTCTGGGACTTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR TCA 90 bp CACCGTGGTAACCTGGCAACAGGAACATTTGCCACCCTGCAAGTCTaGGGAGCAGATGAGCCACTGGAGGGGGCGAAGTCCCAGAGCCAC +
Preference number: 1 (lower is better)
Translates to: HRGNLATGTFATLQV*GADEPLEGAKSQSH
Trigger: GTGGCTCTGGGACTTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR GCA 90 bp CCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGCCACCCTaGAAGTCTGAGGAGCAGATGAGCCACTGGAGGGGGCGAAGTCCC +
Preference number: 1 (lower is better)
Translates to: PVHTVVTWQQEHLPP*KSEEQMSHWRGRSP
Trigger: GGGACTTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR GCA 90 bp TTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCCCCTCTTGTaGTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCC +
Preference number: 1 (lower is better)
Translates to: FSSFLLRPQPSWPLL*FLTLLGLRIRLKGS
Trigger: GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR CCA 90 bp CATGTAAGCAGGCTGTCGACGGATCCTGTCAGGGAAGCCCAATGCTaGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTTTGG +
Preference number: 1 (lower is better)
Translates to: HVSRLSTDPVREAQC*QSLPVLRQYKTAVW
Trigger: CCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGACAGGATCCGTCGACAGCCTGCTTACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CCA 90 bp GTTTGCCACCATGGCAGTGGTCAGGAAGAGTGGAGGACAACCTCATaGCACCGGTTCCTCGACCTAGAGATCTTCGGCTGCATCAAGGAG +
Preference number: 1 (lower is better)
Translates to: VCHHGSGQEEWRTTS*HRFLDLEIFGCIKE
Trigger: CTCCTTGATGCAGCCGAAGATCTCTAGGTCGAGGAACCGGTGCCATGAGGTTGTCCTCCACTCTTCCTGACCACTGCCATGGTGGCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CCA 90 bp GTAGCAGACCCTGAGGTTTGCCACCATGGCAGTGGTCAGGAAGAGTaGAGGACAACCTCATGGCACCGGTTCCTCGACCTAGAGATCTTC +
Preference number: 1 (lower is better)
Translates to: VADPEVCHHGSGQEE*RTTSWHRFLDLEIF
Trigger: GAAGATCTCTAGGTCGAGGAACCGGTGCCATGAGGTTGTCCTCCACTCTTCCTGACCACTGCCATGGTGGCAAACCTCAGGGTCTGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR GCA 90 bp TGTCATGTAAGCAGGCTGTCGACGGATCCTGTCAGGGAAGCCCAATaGTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTT +
Preference number: 1 (lower is better)
Translates to: CHVSRLSTDPVREAQ*WQSLPVLRQYKTAV
Trigger: AACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGACAGGATCCGTCGACAGCCTGCTTACATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR GCA 90 bp ACACCCCACCTGAGAGCTGCTGTTCTGGCCAATTCAGAAGCCTCCTaGTATAATGCCTCGCTGCTGGCGACAGAGTGGATACTGCAGTGT +
Preference number: 1 (lower is better)
Translates to: TPHLRAAVLANSEAS*YNASLLATEWILQC
Trigger: ACACTGCAGTATCCACTCTGTCGCCAGCAGCGAGGCATTATAGCAGGAGGCTTCTGAATTGGCCAGAACAGCAGCTCTCAGGTGGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CCA 90 bp TCATACGTACTGTTTATTAGGCCTCTCCGAGAGTCAGGCCCAGCCTaGCCCCCTGGTAGCTCACATACTGACCAAGCCCACAGGAGACAA +
Preference number: 1 (lower is better)
Translates to: SYVLFIRPLRESGPA*PPGSSHTDQAHRRQ
Trigger: TTGTCTCCTGTGGGCTTGGTCAGTATGTGAGCTACCAGGGGGCCAGGCTGGGCCTGACTCTCGGAGAGGCCTAATAAACAGTACGTATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR GCA 90 bp AGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTaGAGTTTGGCAGGAAGGGTGTGTGCTCACTATAGTCAAACGCTG +
Preference number: 1 (lower is better)
Translates to: SPMLAEPSCPPAIQD*SLAGRVCAHYSQTL
Trigger: CAGCGTTTGACTATAGTGAGCACACACCCTTCCTGCCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CCA 90 bp CAGTCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTaGAGATGTCATGTAAGCAGGCTGTCGACGGATCCTGTCAGGGAA +
Preference number: 1 (lower is better)
Translates to: QSGARGYQAQNFPRE*RCHVSRLSTDPVRE
Trigger: TTCCCTGACAGGATCCGTCGACAGCCTGCTTACATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR GCA 90 bp AATAGAAGACCAACGGGAACTGTAGGAGAACAGCTCAGCAGGCCATaGCCAGTCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAG +
Preference number: 1 (lower is better)
Translates to: NRRPTGTVGEQLSRP*PVRGKRLPSPKLPK
Trigger: CTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGACTGGGCATGGCCTGCTGAGCTGTTCTCCTACAGTTCCCGTTGGTCTTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR TCA 90 bp CCTATGACATTCCTCAGAATGAGGGAGGAGATAAGTAGCAGACCCTaGGGTTTGCCACCATGGCAGTGGTCAGGAAGAGTGGAGGACAAC +
Preference number: 1 (lower is better)
Translates to: PMTFLRMREEISSRP*GLPPWQWSGRVEDN
Trigger: GTTGTCCTCCACTCTTCCTGACCACTGCCATGGTGGCAAACCTCAGGGTCTGCTACTTATCTCCTCCCTCATTCTGAGGAATGTCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR TCA 90 bp CTTTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTaGCCAATAGCGGCTTGCTTCCCCTTGAACCAACTTGCTGCTAAA +
Preference number: 1 (lower is better)
Translates to: LSSLHSSHKGWQGVK*PIAACFPLNQLAAK
Trigger: TTTAGCAGCAAGTTGGTTCAAGGGGAAGCAAGCCGCTATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
3UTR GCA 90 bp ACATGGGAAATGGTAGCCTTGCTACACAGCCTCTCCTTCCTGTGGTaGTGTGTGCCCCAGAAATGGGAGAACAAACACACTAGTCACAAC +
Preference number: 1 (lower is better)
Translates to: TWEMVALLHSLSFLW*CVPQKWENKHTSHN
Trigger: GTTGTGACTAGTGTGTTTGTTCTCCCATTTCTGGGGCACACAGCACCACAGGAAGGAGAGGCTGTGTAGCAAGGCTACCATTTCCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR GCA 90 bp GCCTTCCAGATTAGGGAAGACAATCACAGTTCTGGGGGTGAATTTTaGCATTTGGCTGCTGAACACATATGGCTGACCAGGGAGGGATGT +
Preference number: 1 (lower is better)
Translates to: AFQIREDNHSSGGEF*HLAAEHIWLTREGC
Trigger: ACATCCCTCCCTGGTCAGCCATATGTGTTCAGCAGCCAAATGGCAAAATTCACCCCCAGAACTGTGATTGTCTTCCCTAATCTGGAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CCA 90 bp AAAACATGGGAAATGGTAGCCTTGCTACACAGCCTCTCCTTCCTGTaGTGCTGTGTGCCCCAGAAATGGGAGAACAAACACACTAGTCAC +
Preference number: 1 (lower is better)
Translates to: KTWEMVALLHSLSFL*CCVPQKWENKHTSH
Trigger: GTGACTAGTGTGTTTGTTCTCCCATTTCTGGGGCACACAGCACCACAGGAAGGAGAGGCTGTGTAGCAAGGCTACCATTTCCCATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR TCA 90 bp ACTGCAGTTTGGCAGGAAGGGTGTGTGCTCACTATAGTCAAACGCTaGCAAAACATGGGAAATGGTAGCCTTGCTACACAGCCTCTCCTT +
Preference number: 1 (lower is better)
Translates to: TAVWQEGCVLTIVKR*QNMGNGSLATQPLL
Trigger: AAGGAGAGGCTGTGTAGCAAGGCTACCATTTCCCATGTTTTGTCAGCGTTTGACTATAGTGAGCACACACCCTTCCTGCCAAACTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CCA 90 bp CTGGGGTTTCCTCTTTCTTCCCGTATAGCTTGGAAATGGTCTCTGTaGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGCCTCCAGAGT +
Preference number: 1 (lower is better)
Translates to: LGFPLSSRIAWKWSL*GTLKFRKKTESLQS
Trigger: ACTCTGGAGGCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTTCCAAGCTATACGGGAAGAAAGAGGAAACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CCA 90 bp CACAGTTCTGGGGGTGAATTTTGCCATTTGGCTGCTGAACACATATaGCTGACCAGGGAGGGATGTAATGAGGAAATGAGGTTCTCAGAC +
Preference number: 1 (lower is better)
Translates to: HSSGGEFCHLAAEHI*LTREGCNEEMRFSD
Trigger: GTCTGAGAACCTCATTTCCTCATTACATCCCTCCCTGGTCAGCCATATGTGTTCAGCAGCCAAATGGCAAAATTCACCCCCAGAACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR TCA 90 bp CAATCTGGGAGCCACCATCTGACCTCCCAAGCATTTGGTGACCAATaGATGAATAACTCCAATGTCACACATCCTCAGAGAGAGCTCTCT +
Preference number: 1 (lower is better)
Translates to: QSGSHHLTSQAFGDQ*MNNSNVTHPQRELS
Trigger: AGAGAGCTCTCTCTGAGGATGTGTGACATTGGAGTTATTCATTCATTGGTCACCAAATGCTTGGGAGGTCAGATGGTGGCTCCCAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CCA 90 bp CCGGTTCCTCGACCTAGAGATCTTCGGCTGCATCAAGGAGACACTTaGCTCCTATTACCTCACATAAAACAGTTACTCAGTCAAGTAAGT +
Preference number: 1 (lower is better)
Translates to: PVPRPRDLRLHQGDT*LLLPHIKQLLSQVS
Trigger: ACTTACTTGACTGAGTAACTGTTTTATGTGAGGTAATAGGAGCCAAGTGTCTCCTTGATGCAGCCGAAGATCTCTAGGTCGAGGAACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CCA 90 bp TGTCATTCCTTAATGCTCCTGGGCCTCAGTTTAATTCAAAATGATTaGATCAGTGGCTCTCAATCCTTCATGTCCACCAGAGTCACCTGC +
Preference number: 1 (lower is better)
Translates to: CHSLMLLGLSLIQND*ISGSQSFMSTRVTC
Trigger: GCAGGTGACTCTGGTGGACATGAAGGATTGAGAGCCACTGATCCAATCATTTTGAATTAAACTGAGGCCCAGGAGCATTAAGGAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR TCA 90 bp AAGATGTCATTCCTTAATGCTCCTGGGCCTCAGTTTAATTCAAAATaGTTGGATCAGTGGCTCTCAATCCTTCATGTCCACCAGAGTCAC +
Preference number: 1 (lower is better)
Translates to: KMSFLNAPGPQFNSK*LDQWLSILHVHQSH
Trigger: GTGACTCTGGTGGACATGAAGGATTGAGAGCCACTGATCCAATCATTTTGAATTAAACTGAGGCCCAGGAGCATTAAGGAATGACATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR GCA 90 bp GAGAGAGCTCTCTGGAAGAAACAAACAATAAGGCCAAAACTTACTTaGTCCAAATTGACAACCGGACAGACTGAAGTTCTTTCTCACTTC +
Preference number: 1 (lower is better)
Translates to: ERALWKKQTIRPKLT*SKLTTGQTEVLSHF
Trigger: GAAGTGAGAAAGAACTTCAGTCTGTCCGGTTGTCAATTTGGAGCAAGTAAGTTTTGGCCTTATTGTTTGTTTCTTCCAGAGAGCTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CCA 90 bp TCTGTCATCTACCTTGTAATGTGTGTTATTTCTAGTTGCCTCAATTaGACTATAAAATCTGAAGACAGGGAGGGGTCCAATCTAACACAG +
Preference number: 1 (lower is better)
Translates to: SVIYLVMCVISSCLN*TIKSEDREGSNLTQ
Trigger: CTGTGTTAGATTGGACCCCTCCCTGTCTTCAGATTTTATAGTCCAATTGAGGCAACTAGAAATAACACACATTACAAGGTAGATGACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CCA 90 bp TGCGGCGGTCGCCCTGCCCCTGGAAGGACTGGCGCAAGGCCTGCACCATGTAGAAGCAGCGGGACATCCTaGGGCCCCTGCTCAGGCAGT +
Preference number: 2 (lower is better)
Translates to: CGGRPAPGRTGARPAPCRSSGTS*GPCSGS
Trigger: ACTGCCTGAGCAGGGGCCCCAGGATGTCCCGCTGCT...TCTACATGGTGCAGGCCTTGCGCCAGTCCTTCCAGGGGCAGGGCGACCGCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR CAA 90 bp CAGTCCTGCGCCCACTGCCAGCGAGTCCCTCAAGAGCAGCTCCTCTaGCGTGGCAGAGTTCTTCTGCCCATAGAGGTCGGCTCCCCGGGC +
Preference number: 2 (lower is better)
Translates to: QSCAHCQRVPQEQLL*RGRVLLPIEVGSPG
Trigger: GCCCGGGGAGCCGACCTCTATGGGCAGAAGAACTCTGCCACGCAAGAGGAGCTGCTCTTGAGGGACTCGCTGGCAGTGGGCGCAGGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR GCA 90 bp CTGCGCCCACTGCCAGCGAGTCCCTCAAGAGCAGCTCCTCTTGCGTGGCAGAGTGCCTGGCGGCAGCTCTaGCCTGTGCACACCGTGGTA +
Preference number: 2 (lower is better)
Translates to: LRPLPASPSRAAPLAWQSAWRQL*PVHTVV
Trigger: TACCACGGTGTGCACAGGGCAGAGCTGCCGCCAGGC...ACTCTGCCACGCAAGAGGAGCTGCTCTTGAGGGACTCGCTGGCAGTGGGCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR GCA 90 bp CTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGTGCGGCGGTCGCCCTaGCCCTGGAAGGACTGGCGC +
Preference number: 2 (lower is better)
Translates to: LLCFLTLLGLRIRLKGSPVRRSP*PWKDWR
Trigger: GCGCCAGTCCTTCCAGGGGCAGGGCGACCGCCGCAC...TGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR CCA 90 bp TGGCGGCAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGCGGTCGCCCTGCCCCTaGAAGGACTGGCGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: WRQLCPVHTVVTWQQEHLRSPCP*KDWRKA
Trigger: GGCCTTGCGCCAGTCCTTCCAGGGGCAGGGCGACCG...CAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGCCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR TCA 90 bp CACCTCCACAGCCTCCCACTCCCCGGATCGGCTCGACCTCTTGATGGCATCCACAGTCTGAGGAGCAGATaGGCCACTGGAGGGGGCGAA +
Preference number: 2 (lower is better)
Translates to: HLHSLPLPGSARPLDGIHSLRSR*ATGGGE
Trigger: TTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACT...GTGGATGCCATCAAGAGGTCGAGCCGATCCGGGGAGTGGGAGGCTGTGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR GCA 90 bp CAGGTGAGGGTCCCTGAGGGACAGCTTGTTGCCCTCACTGTTCCTGAGATGCCCCCTCCCTGGTCCCTCTaGCCTGTGGCAAGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: QVRVPEGQLVALTVPEMPPPWSL*PVARSP
Trigger: TGGGCTCCTTGCCACAGGGCAGAGGGACCAGGGAGG...GGGCATCTCAGGAACAGTGAGGGCAACAAGCTGTCCCTCAGGGACCCTCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR GCA 90 bp GTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTCTGCTCAGGCAGTCCTaGGCCCACTGCCAGCGAGTC +
Preference number: 2 (lower is better)
Translates to: VSARAKSLSCLAPVPLPGLLRQS*AHCQRV
Trigger: GACTCGCTGGCAGTGGGCGCAGGACTGCCTGAGCAG...ACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR GCA 90 bp CCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCCCTCCCTGGTCCCTCTaGCCTGTGGCAAGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: PLVLSHPVRTADQAEGLPPPWSL*PVARSP
Trigger: TGGGCTCCTTGCCACAGGGCAGAGGGACCAGGGAGG...GGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR GCA 90 bp GTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTGGCGACGAGGCGTCCTaGAGAGCCTACCACCATGAC +
Preference number: 2 (lower is better)
Translates to: VSARAKSLSCLAPVPLPGGDEAS*RAYHHD
Trigger: GTCATGGTGGTAGGCTCTGCAGGACGCCTCGTCGCC...ACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR CCA 90 bp CCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCGGTCCCTCTGCCCTGTaGCAAGGAGCCCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: PLVLSHPVRTADQAEGLPGPSAL*QGAQVQ
Trigger: CTGCACCTGGGCTCCTTGCCACAGGGCAGAGGGACC...GGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR CCA 90 bp CACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCGAGCAGATGAGCCACTaGAGGGGGCGAAGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: HPVRTADQAEGLPRVSLSEQMSH*RGRSPR
Trigger: TCTGGGACTTCGCCCCCTCCAGTGGCTCATCTGCTC...GGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR TCA 90 bp GTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTGCCACCCTGCAAGTCTaGGGAGCAGATGAGCCACTG +
Preference number: 2 (lower is better)
Translates to: VSARAKSLSCLAPVPLPGATLQV*GADEPL
Trigger: CAGTGGCTCATCTGCTCCTCAGACTTGCAGGGTGGC...ACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR TCA 90 bp TGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCGCAGGTGAGGGTCCCTaGGGGACAGCTTGTTGCCCT +
Preference number: 2 (lower is better)
Translates to: WPLLCFLTLLGLRIRLKGAGEGP*GTACCP
Trigger: AGGGCAACAAGCTGTCCCTCAGGGACCCTCACCTGC...GCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR GCA 90 bp CCCTGCTCAGGCAGTCCTGCGCCCACTGCCAGCGAGTCCCTCAAGAGCAGCTCCGAACATTTGCCACCCTaGAAGTCTGAGGAGCAGATG +
Preference number: 2 (lower is better)
Translates to: PCSGSPAPTASESLKSSSEHLPP*KSEEQM
Trigger: CATCTGCTCCTCAGACTTGCAGGGTGGCAAATGTTC...GGAGCTGCTCTTGAGGGACTCGCTGGCAGTGGGCGCAGGACTGCCTGAGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR CCA 90 bp TGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTGCCCCTGGAAGGACTaGCGCAAGGCCTGCACCATG +
Preference number: 2 (lower is better)
Translates to: WPLLCFLTLLGLRIRLKGCPWKD*RKACTM
Trigger: CATGGTGCAGGCCTTGCGCCAGTCCTTCCAGGGGCA...GCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR CAA 90 bp CAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTaGCCACCCTGCAAGTCTGAGGAGCAGATGAGCCACTGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: QLCPVHTVVTWQQEH*PPCKSEEQMSHWRG
Trigger: CCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR TCA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCAGTCTGAGGAGCAGATaGGCCACTGGAGGGGGCGAA +
Preference number: 2 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSSLRSR*ATGGGE
Trigger: TTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACT...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR TCA 90 bp AGGCCTGCACCATGTAGACCATGCCCTTCAGGTACAGCAGCGGGACATCCTGGGGCCTCACGAATGTCTTaGGCAGCCCGTGCACCTTCT +
Preference number: 2 (lower is better)
Translates to: RPAPCRPCPSGTAAGHPGASRMS*AARAPS
Trigger: AGAAGGTGCACGGGCTGCTCAAGACATTCGTGAGGC...CCCAGGATGTCCCGCTGCTGTACCTGAAGGGCATGGTCTACATGGTGCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR CCA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCTGGTCCGACTCACTaGCATCACCATGAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSPGPTH*HHHEEA
Trigger: GGCCTCCTCATGGTGATGCCAGTGAGTCGGACCAGG...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR CAA 90 bp GGCCCCCTGGTAGCTCACATACTGACCAAGCCCACAGGAGACAAATaGGTGCCTCTGGTCAACCCTTCCCCCTCCTCTCACTTCCTACCC +
Preference number: 2 (lower is better)
Translates to: GPLVAHILTKPTGDK*VPLVNPSPSSHFLP
Trigger: GGGTAGGAAGTGAGAGGAGGGGGAAGGGTTGACCAGAGGCACCAATTTGTCTCCTGTGGGCTTGGTCAGTATGTGAGCTACCAGGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR TCA 90 bp AGTCCCTCAAGAGCAGCTCCTCTTGCGTGGCAGAGTTCTTCTGCCCATAGAGGTTCCCTACCAGGCTCATaGGCTGCGGGTAGTAGCGCG +
Preference number: 2 (lower is better)
Translates to: SPSRAAPLAWQSSSAHRGSLPGS*AAGSSA
Trigger: CGCGCTACTACCCGCAGCTCATGAGCCTGGTAGGGA...ACCTCTATGGGCAGAAGAACTCTGCCACGCAAGAGGAGCTGCTCTTGAGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR TCA 90 bp AGTGCCTCACACAGGTTCTGGTTGGTGTCGGGCTCCTCCGTCAGCACCTCCACACAGAGCCTACCACCATaGCTTCATGCACAAAGGCGC +
Preference number: 2 (lower is better)
Translates to: SASHRFWLVSGSSVSTSTQSLPP*LHAQRR
Trigger: GCGCCTTTGTGCATGAAGTCATGGTGGTAGGCTCTG...TGTGGAGGTGCTGACGGAGGAGCCCGACACCAACCAGAACCTGTGTGAGGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR GCA 90 bp GCTCCTCTTGCGTGGCAGAGTTCTTCTGCCCATAGAGGTCGGCTCCCCGGGCGAAAATCAGCTGTTTCATaGGCACGAAGGCAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: APLAWQSSSAHRGRLPGRKSAVS*ARRQAG
Trigger: TCCTGCCTGCCTTCGTGCGCATGAAACAGCTGATTT...TCGCCCGGGGAGCCGACCTCTATGGGCAGAAGAACTCTGCCACGCAAGAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR CCA 90 bp TGGCGGCAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGAGTCCCTGTCATGTCTaGCTCCTGTTCCCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: WRQLCPVHTVVTWQQEHLSPCHV*LLFPSL
Trigger: CAGGGAGGGGAACAGGAGCCAGACATGACAGGGACT...CAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGCCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR TCA 90 bp AACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCCCCTGACTGCGGATCAGGCTaGAGGGCTCCCCAGGGTGAG +
Preference number: 2 (lower is better)
Translates to: NETKLLIISPQASAELAPDCGSG*RAPQGE
Trigger: CTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTC...AGGGGCCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR GCA 90 bp GTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTAGCTGGCCCCTCTTGTaGTTTCTCACCCTGTTAGGA +
Preference number: 2 (lower is better)
Translates to: VSARAKSLSCLAPVPLPGSWPLL*FLTLLG
Trigger: TCCTAACAGGGTGAGAAAGCACAAGAGGGGCCAGCT...ACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR CCA 90 bp GCTCCCCAGGGTGAGCCTTTCCTGGTCCGACTCACTGGCATCACCATGAGGAGGCACACCGTGGTAACCTaGCAACAGGAACATTTGCCA +
Preference number: 2 (lower is better)
Translates to: APQGEPFLVRLTGITMRRHTVVT*QQEHLP
Trigger: TGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTG...CCTCCTCATGGTGATGCCAGTGAGTCGGACCAGGAAAGGCTCACCCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR TCA 90 bp GTGTCACATACCTGGGATAGGGTGGCCAGGCCCTTGCACGGGGCCCGGCAGGGAACTATAGTCAAACGCTaGCAAAACATGGGAAATGGT +
Preference number: 2 (lower is better)
Translates to: VSHTWDRVARPLHGARQGTIVKR*QNMGNG
Trigger: ACCATTTCCCATGTTTTGTCAGCGTTTGACTATAGT...TCCCTGCCGGGCCCCGTGCAAGGGCCTGGCCACCCTATCCCAGGTATGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR TCA 90 bp TGGCGGCAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGACACACCCCCACCCATaGGCATCTGGAAGAAACAGA +
Preference number: 2 (lower is better)
Translates to: WRQLCPVHTVVTWQQEHLTHPHP*ASGRNR
Trigger: TCTGTTTCTTCCAGATGCTCATGGGTGGGGGTGTGT...CAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGCCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR GCA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCAGCTGGCCCCTCTTGTaGTTTCTCACCCTGTTAGGA +
Preference number: 2 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSSWPLL*FLTLLG
Trigger: TCCTAACAGGGTGAGAAAGCACAAGAGGGGCCAGCT...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR GCA 90 bp AATGAGGAAATGAGGTTCTCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAACAGCTCAGCAGGCCATaGCCAGTCAGGGGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: NEEMRFSDTPPESCCSGQQLSRP*PVRGKR
Trigger: CCTCTTGCCCCTGACTGGGCATGGCCTGCTGAGCTG...TTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGAGAACCTCATTTCCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR CCA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGGGTCCCTCTGCCCTGTaGCAAGGAGCCCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWGPSAL*QGAQVQ
Trigger: CTGCACCTGGGCTCCTTGCCACAGGGCAGAGGGACC...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR CCA 90 bp CAGGTGAGGGTCCCTGAGGGACAGCTTGTTGCCCTCACTGTTCCTGAGATGCCCCACACCGTGGTAACCTaGCAACAGGAACATTTGCCA +
Preference number: 2 (lower is better)
Translates to: QVRVPEGQLVALTVPEMPHTVVT*QQEHLP
Trigger: TGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTG...GGGCATCTCAGGAACAGTGAGGGCAACAAGCTGTCCCTCAGGGACCCTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR CAA 90 bp GCAGAGCCTACCACCATGACTTCATGCACAAAGGCGCCTGGCATGTaGAAGTTGAGTGTCACTGTGCTACACACACCCCCACCCATGAGC +
Preference number: 2 (lower is better)
Translates to: AEPTTMTSCTKAPGM*KLSVTVLHTPPPMS
Trigger: GCTCATGGGTGGGGGTGTGTGTAGCACAGTGACACTCAACTTCAACATGCCAGGCGCCTTTGTGCATGAAGTCATGGTGGTAGGCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR TCA 90 bp CCCTGCAAGTCTGAGGAGCAGATGAGCCACTGGAGGGGGCGAAGTCCCAGAGCCCCCAGACTCATTAAATaGAAGACACTGTCTCTGCTA +
Preference number: 2 (lower is better)
Translates to: PCKSEEQMSHWRGRSPRAPRLIK*KTLSLL
Trigger: TAGCAGAGACAGTGTCTTTCATTTAATGAGTCTGGG...GGCTCTGGGACTTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR TCA 90 bp GGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACTTAATAAAGCAAGCCCCATCACTGGCATCACCATaGGGAGGCCTGGCGGCAGCT +
Preference number: 2 (lower is better)
Translates to: GPLSYFKSPRAHLIKQAPSLASP*GGLAAA
Trigger: AGCTGCCGCCAGGCCTCCTCATGGTGATGCCAGTGA...TGGGGCTTGCTTTATTAAGTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR TCA 90 bp CAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCAAGGGCTCCCCAGGGTaGGCCTTTCCTGGTCCGACT +
Preference number: 2 (lower is better)
Translates to: QERNKTSHHFSSGLSRAGKGSPG*AFPGPT
Trigger: AGTCGGACCAGGAAAGGCTCACCCTGGGGAGCCCTT...GCCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR TCA 90 bp TCAGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCCATCTCCAGCCCCTTaGTGGCTGTCTCTTAGAGTA +
Preference number: 2 (lower is better)
Translates to: SGKPNAGRAFLSSGNTRLPSPAP*WLSLRV
Trigger: TACTCTAAGAGACAGCCATCAAGGGGCTGGAGATGG...CAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR GCA 90 bp CTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGCAACAGGAACATTTaGCACCCTGCAAGTCTGAGG +
Preference number: 2 (lower is better)
Translates to: LLCFLTLLGLRIRLKGSPGNRNI*HPASLR
Trigger: CCTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCC...TGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR GCA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCTCACTGTTCCTGAGATaGCCCAGCCCAAGAACGAAA +
Preference number: 2 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSSLFLR*PSPRTK
Trigger: TTTCGTTCTTGGGCTGGGGCATCTCAGGAACAGTGA...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR GCA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCGTTGTTCCGCTGAAGTaGCTCACACAGGTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSVVPLK*LTQVLV
Trigger: AACCAGAACCTGTGTGAGGCACTTCAGCGGAACAAC...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR CCA 90 bp GGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACTTAATAAAGCAAGCCCCACAATGTAGGTCCCCATaGTGTGCAAGCCCCCGCCGC +
Preference number: 2 (lower is better)
Translates to: GPLSYFKSPRAHLIKQAPQCRSP*CASPRR
Trigger: GCGGCGGGGGCTTGCACACCATGGGGACCTACATTG...TGGGGCTTGCTTTATTAAGTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR CCA 90 bp CAGCCCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGGCCGGATGCCACGGATaGCAGCGTTCTGCCTCACGA +
Preference number: 2 (lower is better)
Translates to: QPKNETKLLIISPQASAEAGCHG*QRSASR
Trigger: TCGTGAGGCAGAACGCTGCCATCCGTGGCATCCGGC...CTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR CAA 90 bp CCTACCACCATGACTTCATGCACAAAGGCGCCTGGCATGTTGAAGTaGAGTGTCACTGTGCTACACACACCCCCACCCATGAGCATCTGG +
Preference number: 2 (lower is better)
Translates to: PTTMTSCTKAPGMLK*SVTVLHTPPPMSIW
Trigger: CCAGATGCTCATGGGTGGGGGTGTGTGTAGCACAGTGACACTCAACTTCAACATGCCAGGCGCCTTTGTGCATGAAGTCATGGTGGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR TCA 90 bp TCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAATTCAGAAGCCTCCTGCTACCATCTCCAGCCCCTTaGTGGCTGTCTCTTAGAGTA +
Preference number: 2 (lower is better)
Translates to: SDTPPESCCSGQFRSLLLPSPAP*WLSLRV
Trigger: TACTCTAAGAGACAGCCATCAAGGGGCTGGAGATGG...TAGCAGGAGGCTTCTGAATTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR GCA 90 bp AATGAGGAAATGAGGTTCTCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAACTCTCCTTCCTGTGGTaGTGTGTGCCCCAGAAATGG +
Preference number: 2 (lower is better)
Translates to: NEEMRFSDTPPESCCSGQLSFLW*CVPQKW
Trigger: CCATTTCTGGGGCACACAGCACCACAGGAAGGAGAG...TTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGAGAACCTCATTTCCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR GCA 90 bp CCTTCCAGATTAGGGAAGACAATCACAGTTCTGGGGGTGAATTTTGCCATTTGGCAGCTCAGCAGGCCATaGCCAGTCAGGGGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: PSRLGKTITVLGVNFAIWQLSRP*PVRGKR
Trigger: CCTCTTGCCCCTGACTGGGCATGGCCTGCTGAGCTG...CCAAATGGCAAAATTCACCCCCAGAACTGTGATTGTCTTCCCTAATCTGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR GCA 90 bp CAGCCCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGGCATCCACCACGCTCTaGATGTACAGCCCATCCTCG +
Preference number: 2 (lower is better)
Translates to: QPKNETKLLIISPQASAEASTTL*MYSPSS
Trigger: CGAGGATGGGCTGTACATGCAGAGCGTGGTGGATGC...CTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR CCA 90 bp CAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCAGTCCCTGTCATGTCTaGCTCCTGTTCCCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: QERNKTSHHFSSGLSRAGSPCHV*LLFPSL
Trigger: CAGGGAGGGGAACAGGAGCCAGACATGACAGGGACT...GCCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR CCA 90 bp TCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATAGCCTCTCCTTCCTGTaGTGCTGTGTGCCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: SGARGYQAQNFPREWRCHSLSFL*CCVPQK
Trigger: TTTCTGGGGCACACAGCACCACAGGAAGGAGAGGCT...ATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR CCA 90 bp CAGCCCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCACACAGGTTCTGGTTaGTGTCGGGCTCCTCCGTCA +
Preference number: 2 (lower is better)
Translates to: QPKNETKLLIISPQASAEHTGSG*CRAPPS
Trigger: TGACGGAGGAGCCCGACACCAACCAGAACCTGTGTG...CTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR TCA 90 bp CATCTTGACTTAAACAGGCTCCTGAGGGCTAGCTGTACAGAGTCTTTGGGTAGCGGCAGGAGAATCACTTaGACCTGGGAGGCGAAGGTT +
Preference number: 2 (lower is better)
Translates to: HLDLNRLLRASCTESLGSGRRIT*TWEAKV
Trigger: AACCTTCGCCTCCCAGGTTCAAGTGATTCTCCTGCC...GCTACCCAAAGACTCTGTACAGCTAGCCCTCAGGAGCCTGTTTAAGTCAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR GCA 90 bp AGGGTCTCCAGTGCTTCTCCACACTTGTGGGCCTTCCAGATTAGGGAAGACAATTCCTGTGGTGCTGTGTaGCCCAGAAATGGGAGAACA +
Preference number: 2 (lower is better)
Translates to: RVSSASPHLWAFQIREDNSCGAV*PRNGRT
Trigger: TGTTCTCCCATTTCTGGGGCACACAGCACCACAGGA...ATTGTCTTCCCTAATCTGGAAGGCCCACAAGTGTGGAGAAGCACTGGAGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR GCA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCGGATGGCAGCGTTCTaGCTCACGAATGTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWRMAAF*LTNVLS
Trigger: GCTCAAGACATTCGTGAGGCAGAACGCTGCCATCCG...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR CCA 90 bp GCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTTTGGTGTGTGCCCCAGAAATaGGAGAACAAACACACTAGT +
Preference number: 2 (lower is better)
Translates to: AQCWQSLPVLRQYKTAVWCVPQK*ENKHTS
Trigger: ACTAGTGTGTTTGTTCTCCCATTTCTGGGGCACACA...CCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CAA 90 bp ATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTTaGGCAGGAAGGGTGTGTGCTCACTATAGTCAAACGCTGACAAAA +
Preference number: 2 (lower is better)
Translates to: MLAEPSCPPAIQDCS*AGRVCAHYSQTLTK
Trigger: TTTTGTCAGCGTTTGACTATAGTGAGCACACACCCTTCCTGCCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR TCA 90 bp CCTGTAGTCCTGGCTACTTGCAAAGCCGAGGCAGGAGTATCGCTTGAACCTGGGGAAGTTGACTCCAGTTaGCTGGAAATAGAAGACCAA +
Preference number: 2 (lower is better)
Translates to: PVVLATCKAEAGVSLEPGEVDSS*LEIEDQ
Trigger: TTGGTCTTCTATTTCCAGTCAACTGGAGTCAACTTC...CCCAGGTTCAAGCGATACTCCTGCCTCGGCTTTGCAAGTAGCCAGGACTACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR TCA 90 bp AGGAGACAAATTGGTGCCTCTGGTCAACCCTTCCCCCTCCTCTCACTTCCTACCAAACTTTATGTTGACTaGGATGCAACCATCTCCAGC +
Preference number: 2 (lower is better)
Translates to: RRQIGASGQPFPLLSLPTKLYVD*DATISS
Trigger: GCTGGAGATGGTTGCATCTCAGTCAACATAAAGTTT...GGTAGGAAGTGAGAGGAGGGGGAAGGGTTGACCAGAGGCACCAATTTGTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR GCA 90 bp CAGCCCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGGAACATTTGCCACCCTaGAAGTCTGAGGAGCAGATG +
Preference number: 2 (lower is better)
Translates to: QPKNETKLLIISPQASAEEHLPP*KSEEQM
Trigger: CATCTGCTCCTCAGACTTGCAGGGTGGCAAATGTTC...CTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR GCA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGCAGAGTTCTCCTCCCTaGAGATGCGAGCCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRQSSPP*RCEPRK
Trigger: CTTCCTGGGCTCGCATCTGCAGGGAGGAGAACTCTG...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR CCA 90 bp TCATGTCCACCAGAGTCACCTGCAAGGCTTGTTCAGACACAGATAGCTGGATCCAACTTCCCAAGGGAGTaGAGATGTCATGTAAGCAGG +
Preference number: 2 (lower is better)
Translates to: SCPPESPARLVQTQIAGSNFPRE*RCHVSR
Trigger: CCTGCTTACATGACATCTCCACTCCCTTGGGAAGTT...GGATCCAGCTATCTGTGTCTGAACAAGCCTTGCAGGTGACTCTGGTGGACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR TCA 90 bp CTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCTGTTCAGGGTGCTTCAGGGACAAGTaGTGTCCCAGAGTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: LQPLDGCLLEYFLNFCSGCFRDK*CPRVLL
Trigger: GAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCA...CCCTGAACAGAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR CCA 90 bp CATCTTGACTTAAACAGGCTCCTGAGGGCTAGCTGTACAGAGTCTTTGGGTAGCTCTTCCCGTATAGCTTaGAAATGGTCTCTGTGGGGA +
Preference number: 2 (lower is better)
Translates to: HLDLNRLLRASCTESLGSSSRIA*KWSLWG
Trigger: TCCCCACAGAGACCATTTCCAAGCTATACGGGAAGA...GCTACCCAAAGACTCTGTACAGCTAGCCCTCAGGAGCCTGTTTAAGTCAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CCA 90 bp GGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACTTAATAAAGCAAGCCCCACCACCCATGAGCATCTaGAAGAAACAGAAGTCATCG +
Preference number: 2 (lower is better)
Translates to: GPLSYFKSPRAHLIKQAPPPMSI*KKQKSS
Trigger: CGATGACTTCTGTTTCTTCCAGATGCTCATGGGTGG...TGGGGCTTGCTTTATTAAGTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR CAA 90 bp CAGATTAGGGAAGACAATCACAGTTCTGGGGGTGAATTTTGCCATTaGGCTGCTGAACACATATGGCTGACCAGGGAGGGATGTAATGAG +
Preference number: 2 (lower is better)
Translates to: QIREDNHSSGGEFCH*AAEHIWLTREGCNE
Trigger: CTCATTACATCCCTCCCTGGTCAGCCATATGTGTTCAGCAGCCAAATGGCAAAATTCACCCCCAGAACTGTGATTGTCTTCCCTAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR TCA 90 bp AGAGGAGGTGGGTTTAGAGGAAAAAGGACTTTTATGACTGCTAGGAGTTTGGTGTGCTTCAGGGACAAGTaGTGTCCCAGAGTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: RGGGFRGKRTFMTARSLVCFRDK*CPRVLL
Trigger: GAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCA...CACCAAACTCCTAGCAGTCATAAAAGTCCTTTTTCCTCTAAACCCACCTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR GCA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGCCGGCAATACAAGACTaGAGTTTGGCAGGAAGGGTG +
Preference number: 2 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRPAIQD*SLAGRV
Trigger: CACCCTTCCTGCCAAACTGCAGTCTTGTATTGCCGG...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR TCA 90 bp AGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATGTAAGCAGGCTAGGCAAACTTTATGTTaGCTGAGATGCAACCATCTC +
Preference number: 2 (lower is better)
Translates to: RLPSPKLPKGVEMSCKQARQTLC*LRCNHL
Trigger: GAGATGGTTGCATCTCAGTCAACATAAAGTTTGCCT...AGCCTGCTTACATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR TCA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCACTGGGAGCCACCATCTaGCCTCCCAAGCATTTGGTG +
Preference number: 2 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPLGATI*PPKHLV
Trigger: CACCAAATGCTTGGGAGGTCAGATGGTGGCTCCCAG...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR TCA 90 bp TTGTTTTATCATACGTACTGTTTATTAGGCCTCTCCGAGAGTCAGGCCCAGCCTGATGTAATGAGGAAATaGGGTTCTCAGACACCCCAC +
Preference number: 2 (lower is better)
Translates to: LFYHTYCLLGLSESQAQPDVMRK*GSQTPH
Trigger: GTGGGGTGTCTGAGAACCTCATTTCCTCATTACATC...AGGCTGGGCCTGACTCTCGGAGAGGCCTAATAAACAGTACGTATGATAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR GCA 90 bp AGGAGAGAAAAATCACAGCACGAAGACTTGGTGAAATGTAACCAAGATGTCATTGGGACCACAGTCGCGTaGCACCATGCCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: RREKSQHEDLVKCNQDVIGTTVA*HHAWLI
Trigger: AATTAGCCAGGCATGGTGGCACGCGACTGTGGTCCC...AATGACATCTTGGTTACATTTCACCAAGTCTTCGTGCTGTGATTTTTCTCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CCA 90 bp AGGATTACAAACCTCAGTGCTGCAGCAAGGAACAAGGCATGTGGATTGGTAGTCTTTCTGAATTCAATCTaGGAGCCACCATCTGACCTC +
Preference number: 2 (lower is better)
Translates to: RITNLSAAARNKACGLVVFLNSI*EPPSDL
Trigger: GAGGTCAGATGGTGGCTCCCAGATTGAATTCAGAAA...GACTACCAATCCACATGCCTTGTTCCTTGCTGCAGCACTGAGGTTTGTAATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CCA 90 bp TTGTTTTATCATACGTACTGTTTATTAGGCCTCTCCGAGAGTCAGGCCCAGCCTATGAGCCACCAAGCCTaGCCTGCAAACTTAGTGTTT +
Preference number: 2 (lower is better)
Translates to: LFYHTYCLLGLSESQAQPMSHQA*PANLVF
Trigger: AAACACTAAGTTTGCAGGCCAGGCTTGGTGGCTCAT...AGGCTGGGCCTGACTCTCGGAGAGGCCTAATAAACAGTACGTATGATAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CAA 90 bp CATCTTGACTTAAACAGGCTCCTGAGGGCTAGCTGTACAGAGTCTTaGGGTAGCCATGAAAGACATGTCTACCTGAGTTTATCTAGCTCT +
Preference number: 2 (lower is better)
Translates to: HLDLNRLLRASCTES*GSHERHVYLSLSSS
Trigger: AGAGCTAGATAAACTCAGGTAGACATGTCTTTCATGGCTACCCAAAGACTCTGTACAGCTAGCCCTCAGGAGCCTGTTTAAGTCAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CCA 90 bp CCTTCCAGATTAGGGAAGACAATCACAGTTCTGGGGGTGAATTTTGCCATTTGGTGTGTGCCCCAGAAATaGGAGAACAAACACACTAGT +
Preference number: 2 (lower is better)
Translates to: PSRLGKTITVLGVNFAIWCVPQK*ENKHTS
Trigger: ACTAGTGTGTTTGTTCTCCCATTTCTGGGGCACACA...CCAAATGGCAAAATTCACCCCCAGAACTGTGATTGTCTTCCCTAATCTGGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR CCA 90 bp AGGAGAGAAAAATCACAGCACGAAGACTTGGTGAAATGTAACCAAGATGTCATTAGCCTCTCCTTCCTGTaGTGCTGTGTGCCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: RREKSQHEDLVKCNQDVISLSFL*CCVPQK
Trigger: TTTCTGGGGCACACAGCACCACAGGAAGGAGAGGCT...AATGACATCTTGGTTACATTTCACCAAGTCTTCGTGCTGTGATTTTTCTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CCA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCATTGCCACCATGGCAGTaGTCAGGAAGAGTGGAGGAC +
Preference number: 2 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPLPPWQ*SGRVED
Trigger: GTCCTCCACTCTTCCTGACCACTGCCATGGTGGCAA...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR TCA 90 bp CCTTCCAGATTAGGGAAGACAATCACAGTTCTGGGGGTGAATTTTGCCATTTGGAGGCAAACTTTATGTTaGCTGAGATGCAACCATCTC +
Preference number: 2 (lower is better)
Translates to: PSRLGKTITVLGVNFAIWRQTLC*LRCNHL
Trigger: GAGATGGTTGCATCTCAGTCAACATAAAGTTTGCCT...CCAAATGGCAAAATTCACCCCCAGAACTGTGATTGTCTTCCCTAATCTGGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR GCA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCATCCTGTGGTGCTGTGTaGCCCAGAAATGGGAGAACA +
Preference number: 2 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPSCGAV*PRNGRT
Trigger: TGTTCTCCCATTTCTGGGGCACACAGCACCACAGGA...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR GCA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGCCACCAAGCCTGGCCTaGAAACTTAGTGTTTTTCTA +
Preference number: 2 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRPPSLA*KLSVFL
Trigger: TAGAAAAACACTAAGTTTGCAGGCCAGGCTTGGTGG...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CCA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGTGGAAATGGTCTCTGTaGGGAACCCTAAAATTCAGG +
Preference number: 2 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRWKWSL*GTLKFR
Trigger: CCTGAATTTTAGGGTTCCCCACAGAGACCATTTCCA...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR TCA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGAAACTTTATGTTGACTaGGATGCAACCATCTCCAGC +
Preference number: 2 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRKLYVD*DATISS
Trigger: GCTGGAGATGGTTGCATCTCAGTCAACATAAAGTTT...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR TCA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGGAAGTTGACTCCAGTTaGCTGGAAATAGAAGACCAA +
Preference number: 2 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVREVDSS*LEIEDQ
Trigger: TTGGTCTTCTATTTCCAGTCAACTGGAGTCAACTTC...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR TCA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCATTGCCATTTGGCTGCTaGACACATATGGCTGACCAG +
Preference number: 2 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPLPFGC*THMADQ
Trigger: CTGGTCAGCCATATGTGTTCAGCAGCCAAATGGCAA...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR TCA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCAGACAACCGGACAGACTaGAGTTCTTTCTCACTTCAA +
Preference number: 2 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPDNRTD*SSFSLQ
Trigger: TTGAAGTGAGAAAGAACTTCAGTCTGTCCGGTTGTC...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CAA 90 bp CTCTGGAAGAAACAAACAATAAGGCCAAAACTTACTTGCTCCAAATaGACAACCGGACAGACTGAAGTTCTTTCTCACTTCAAAGAACAT +
Preference number: 2 (lower is better)
Translates to: LWKKQTIRPKLTCSK*TTGQTEVLSHFKEH
Trigger: ATGTTCTTTGAAGTGAGAAAGAACTTCAGTCTGTCCGGTTGTCAATTTGGAGCAAGTAAGTTTTGGCCTTATTGTTTGTTTCTTCCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR TCA 90 bp AGGAGAGAAAAATCACAGCACGAAGACTTGGTGAAATGTAACCAAGATGTCATTACTATAGTCAAACGCTaGCAAAACATGGGAAATGGT +
Preference number: 2 (lower is better)
Translates to: RREKSQHEDLVKCNQDVITIVKR*QNMGNG
Trigger: ACCATTTCCCATGTTTTGTCAGCGTTTGACTATAGT...AATGACATCTTGGTTACATTTCACCAAGTCTTCGTGCTGTGATTTTTCTCTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR TCA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCATTGCTGCTAAAGTGTTaGCTTAGGTCTATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPLLLKC*LRSISE
Trigger: TTCAGAAATAGACCTAAGTCAACACTTTAGCAGCAA...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CCA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCATCTAGTTGCCTCAATTaGACTATAAAATCTGAAGAC +
Preference number: 2 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPSSCLN*TIKSED
Trigger: GTCTTCAGATTTTATAGTCCAATTGAGGCAACTAGA...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR GCA 72 bp GAGACAGGGGTGCGGTCCCAGGTGCGGCGGTCGCCCTaGCCCTGGAAGGACTGGCGCAAGGCCTGCACCATG +
Preference number: 3 (lower is better)
Translates to: ETGVRSQVRRSP*PWKDWRKACTM
Trigger: CATGGTGCAGGCCTTGCGCCAGTCCTTCCAGGGGCAGGGCGACCGCCGCACCTGGGACCGCACCCCTGTCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR GCA 72 bp CAGCGGGACATCCTGGGGCCCCTGCTCAGGCAGTCCTaGGCCCACTGCCAGCGAGTCCCTCAAGAGCAGCTC +
Preference number: 3 (lower is better)
Translates to: QRDILGPLLRQS*AHCQRVPQEQL
Trigger: GAGCTGCTCTTGAGGGACTCGCTGGCAGTGGGCGCAGGACTGCCTGAGCAGGGGCCCCAGGATGTCCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR CCA 72 bp TCTGCATGTACAGCCCATCCTCGAAGGAGGCGGCCATaGAGACAGGGGTGCGGTCCCAGGTGCGGCGGTCGC +
Preference number: 3 (lower is better)
Translates to: SACTAHPRRRRP*RQGCGPRCGGR
Trigger: GCGACCGCCGCACCTGGGACCGCACCCCTGTCTCCATGGCCGCCTCCTTCGAGGATGGGCTGTACATGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR TCA 72 bp TGCCACGGATGGCAGCGTTCTGCCTCACGAATGTCTTaGGCAGCCCGTGCACCTTCTCGGCTCTCCGGCCGG +
Preference number: 3 (lower is better)
Translates to: CHGWQRSASRMS*AARAPSRLSGR
Trigger: CCGGCCGGAGAGCCGAGAAGGTGCACGGGCTGCTCAAGACATTCGTGAGGCAGAACGCTGCCATCCGTGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR CCA 72 bp GAACAGCCAGCCAAGTGTCACATACCTGGGATAGGGTaGCCAGGCCCTTGCACGGGGCCCGGCAGGGAGAGT +
Preference number: 3 (lower is better)
Translates to: EQPAKCHIPGIG*PGPCTGPGRES
Trigger: ACTCTCCCTGCCGGGCCCCGTGCAAGGGCCTGGCCACCCTATCCCAGGTATGTGACACTTGGCTGGCTGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR GCA 72 bp CCCATAGAGGTCGGCTCCCCGGGCGACGAGGCGTCCTaGAGAGCCTACCACCATGACTTCATGCACAAAGGC +
Preference number: 3 (lower is better)
Translates to: PIEVGSPGDEAS*RAYHHDFMHKG
Trigger: GCCTTTGTGCATGAAGTCATGGTGGTAGGCTCTGCAGGACGCCTCGTCGCCCGGGGAGCCGACCTCTATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR CAA 90 bp CACCTCCACAGCCTCCCACTCCCCGGATCGGCTCGACCTCTTGATGGCATCCACTCCCTGAGGGACAGCTaGTTGCCCTCACTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: HLHSLPLPGSARPLDGIHSLRDS*LPSLFL
Trigger: CAGGAACAGTGAGGGCAACAAGCTGTCCCTCAGGGA...GTGGATGCCATCAAGAGGTCGAGCCGATCCGGGGAGTGGGAGGCTGTGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR TCA 72 bp CCACAGCCTCCCACTCCCCGGATCGGCTCGACCTCTTaGTGGCATCCACCACGCTCTGCATGTACAGCCCAT +
Preference number: 3 (lower is better)
Translates to: PQPPTPRIGSTS*WHPPRSACTAH
Trigger: ATGGGCTGTACATGCAGAGCGTGGTGGATGCCATCAAGAGGTCGAGCCGATCCGGGGAGTGGGAGGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR GCA 72 bp TCCCTGGTCCCTCTGCCCTGTGGCAAGGAGCCCAGGTaGAGGCTCATAGGTTGTTCCGCTGAAGTGCCTCAC +
Preference number: 3 (lower is better)
Translates to: SLVPLPCGKEPR*RLIGCSAEVPH
Trigger: GTGAGGCACTTCAGCGGAACAACCTATGAGCCTGCACCTGGGCTCCTTGCCACAGGGCAGAGGGACCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR CCA 72 bp TTGCCACCCTGCAAGTCTGAGGAGCAGATGAGCCACTaGAGGGGGCGAAGTCCCAGAGCCACCTCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: LPPCKSEEQMSH*RGRSPRATSGF
Trigger: GAAGCCAGAGGTGGCTCTGGGACTTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGGTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR CCA 72 bp CTGCCAGCGAGTCCCTCAAGAGCAGCTCCTCTTGCGTaGCAGAGTTCTTCTGCCCATAGAGGTCGGCTCCCC +
Preference number: 3 (lower is better)
Translates to: LPASPSRAAPLA*QSSSAHRGRLP
Trigger: GGGGAGCCGACCTCTATGGGCAGAAGAACTCTGCCACGCAAGAGGAGCTGCTCTTGAGGGACTCGCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR CAA 90 bp TGGCGGCAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGTCACACAGGTTCTGGTaGGTGTCGGGCTCCTCCGTC +
Preference number: 3 (lower is better)
Translates to: WRQLCPVHTVVTWQQEHLSHRFW*VSGSSV
Trigger: GACGGAGGAGCCCGACACCAACCAGAACCTGTGTGA...CAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGCCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR TCA 72 bp AGGAACATTTGCCACCCTGCAAGTCTGAGGAGCAGATaGGCCACTGGAGGGGGCGAAGTCCCAGAGCCACCT +
Preference number: 3 (lower is better)
Translates to: RNICHPASLRSR*ATGGGEVPEPP
Trigger: AGGTGGCTCTGGGACTTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGGTGGCAAATGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR TCA 72 bp CAAGGAGCCCAGGTGCAGGCTCATAGGTTGTTCCGCTaGAGTGCCTCACACAGGTTCTGGTTGGTGTCGGGC +
Preference number: 3 (lower is better)
Translates to: QGAQVQAHRLFR*SASHRFWLVSG
Trigger: GCCCGACACCAACCAGAACCTGTGTGAGGCACTTCAGCGGAACAACCTATGAGCCTGCACCTGGGCTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR GCA 72 bp AGCAGGCTGTCGACGGATCCTGTCAGGGAAGCCCAATaGTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAG +
Preference number: 3 (lower is better)
Translates to: SRLSTDPVREAQ*WQSLPVLRQYK
Trigger: CTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGACAGGATCCGTCGACAGCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CCA 72 bp TGGCGGCAGCTCTGCCCTGTGCACACCGTGGTAACCTaGCAACAGGAACATTTGCCACCCTGCAAGTCTGAG +
Preference number: 3 (lower is better)
Translates to: WRQLCPVHTVVT*QQEHLPPCKSE
Trigger: CTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGCCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR CCA 72 bp CTGTTTATTAGGCCTCTCCGAGAGTCAGGCCCAGCCTaGCCCCCTGGTAGCTCACATACTGACCAAGCCCAC +
Preference number: 3 (lower is better)
Translates to: LFIRPLRESGPA*PPGSSHTDQAH
Trigger: GTGGGCTTGGTCAGTATGTGAGCTACCAGGGGGCCAGGCTGGGCCTGACTCTCGGAGAGGCCTAATAAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CAA 90 bp GTTGTTCCGCTGAAGTGCCTCACACAGGTTCTGGTTGGTGTCGGGCTCCTCCGTCCGAGCTGGCCCCTCTaGTGCTTTCTCACCCTGTTA +
Preference number: 3 (lower is better)
Translates to: VVPLKCLTQVLVGVGLLRPSWPL*CFLTLL
Trigger: TAACAGGGTGAGAAAGCACAAGAGGGGCCAGCTCGG...ACGGAGGAGCCCGACACCAACCAGAACCTGTGTGAGGCACTTCAGCGGAACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
3UTR-3UTR CAA 90 bp TGGCGGCAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGCTGAGGGACAGCTTGTaGCCCTCACTGTTCCTGAGA +
Preference number: 3 (lower is better)
Translates to: WRQLCPVHTVVTWQQEHLLRDSL*PSLFLR
Trigger: TCTCAGGAACAGTGAGGGCAACAAGCTGTCCCTCAG...CAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGCCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR CAA 90 bp GGCCCAGCCTGGCCCCCTGGTAGCTCACATACTGACCAAGCCCACAGGAGACAATTCTTCCCGTATAGCTaGGAAATGGTCTCTGTGGGG +
Preference number: 3 (lower is better)
Translates to: GPAWPPGSSHTDQAHRRQFFPYS*EMVSVG
Trigger: CCCCACAGAGACCATTTCCAAGCTATACGGGAAGAA...TTGTCTCCTGTGGGCTTGGTCAGTATGTGAGCTACCAGGGGGCCAGGCTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR TCA 72 bp AACCTGGCAACAGGAACATTTGCCACCCTGCAAGTCTaGGGAGCAGATGAGCCACTGGAGGGGGCGAAGTCC +
Preference number: 3 (lower is better)
Translates to: NLATGTFATLQV*GADEPLEGAKS
Trigger: GGACTTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR GCA 72 bp ACCGTGGTAACCTGGCAACAGGAACATTTGCCACCCTaGAAGTCTGAGGAGCAGATGAGCCACTGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: TVVTWQQEHLPP*KSEEQMSHWRG
Trigger: CCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR CCA 72 bp AGGCTGTCGACGGATCCTGTCAGGGAAGCCCAATGCTaGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACT +
Preference number: 3 (lower is better)
Translates to: RLSTDPVREAQC*QSLPVLRQYKT
Trigger: AGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGACAGGATCCGTCGACAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CCA 72 bp CATGGCAGTGGTCAGGAAGAGTGGAGGACAACCTCATaGCACCGGTTCCTCGACCTAGAGATCTTCGGCTGC +
Preference number: 3 (lower is better)
Translates to: HGSGQEEWRTTS*HRFLDLEIFGC
Trigger: GCAGCCGAAGATCTCTAGGTCGAGGAACCGGTGCCATGAGGTTGTCCTCCACTCTTCCTGACCACTGCCATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CCA 72 bp CCTGAGGTTTGCCACCATGGCAGTGGTCAGGAAGAGTaGAGGACAACCTCATGGCACCGGTTCCTCGACCTA +
Preference number: 3 (lower is better)
Translates to: PEVCHHGSGQEE*RTTSWHRFLDL
Trigger: TAGGTCGAGGAACCGGTGCCATGAGGTTGTCCTCCACTCTTCCTGACCACTGCCATGGTGGCAAACCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CAA 90 bp CTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCACTGAGGGACAGCTTGTaGCCCTCACTGTTCCTGAGA +
Preference number: 3 (lower is better)
Translates to: LLCFLTLLGLRIRLKGSPLRDSL*PSLFLR
Trigger: TCTCAGGAACAGTGAGGGCAACAAGCTGTCCCTCAG...TGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR TCA 72 bp TTTCATGCCCTCCCCAAGCACTGCTTCAGGGACAAGTaGTGTCCCAGAGTTCTCCTCCCTGCAGATGCGAGC +
Preference number: 3 (lower is better)
Translates to: FHALPKHCFRDK*CPRVLLPADAS
Trigger: GCTCGCATCTGCAGGGAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCAGTGCTTGGGGAGGGCATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR CAA 90 bp AGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCATGGGAAATGGTAGCCTaGCTACACAGCCTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: REAQCWQSLPVLRQYKTAWEMVA*LHSLSF
Trigger: GAAGGAGAGGCTGTGTAGCAAGGCTACCATTTCCCA...TGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR GCA 72 bp GCTATAATGCCTCGCTGCTGGCGACAGAGTGGATACTaGAGTGTGAGGCAGAGAGGAGGTGGGTTTAGAGGA +
Preference number: 3 (lower is better)
Translates to: AIMPRCWRQSGY*SVRQRGGGFRG
Trigger: TCCTCTAAACCCACCTCCTCTCTGCCTCACACTGCAGTATCCACTCTGTCGCCAGCAGCGAGGCATTATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CCA 72 bp GAGCCACTGGAGGGGGCGAAGTCCCAGAGCCACCTCTaGCTTCACCCAGACTCATTAAATGAAAGACACTGT +
Preference number: 3 (lower is better)
Translates to: EPLEGAKSQSHL*LHPDSLNERHC
Trigger: ACAGTGTCTTTCATTTAATGAGTCTGGGTGAAGCCAGAGGTGGCTCTGGGACTTCGCCCCCTCCAGTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR-3UTR CAA 90 bp TCCTCTCTGCCAAACCAGGGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACTGGCAACAGGAACATTaGCCACCCTGCAAGTCTGAG +
Preference number: 3 (lower is better)
Translates to: SSLPNQGPLSYFKSPRAHWQQEH*PPCKSE
Trigger: CTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCA...GTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCCCTGGTTTGGCAGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR GCA 72 bp CTGAGAGCTGCTGTTCTGGCCAATTCAGAAGCCTCCTaGTATAATGCCTCGCTGCTGGCGACAGAGTGGATA +
Preference number: 3 (lower is better)
Translates to: LRAAVLANSEAS*YNASLLATEWI
Trigger: TATCCACTCTGTCGCCAGCAGCGAGGCATTATAGCAGGAGGCTTCTGAATTGGCCAGAACAGCAGCTCTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CCA 72 bp CCAATTCAGAAGCCTCCTGCTATAATGCCTCGCTGCTaGCGACAGAGTGGATACTGCAGTGTGAGGCAGAGA +
Preference number: 3 (lower is better)
Translates to: PIQKPPAIMPRC*RQSGYCSVRQR
Trigger: TCTCTGCCTCACACTGCAGTATCCACTCTGTCGCCAGCAGCGAGGCATTATAGCAGGAGGCTTCTGAATTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR TCA 72 bp CCAGAGCCACCTCTGGCTTCACCCAGACTCATTAAATaGAAGACACTGTCTCTGCTAGGGCCAAGTCCCTGT +
Preference number: 3 (lower is better)
Translates to: PEPPLASPRLIK*KTLSLLGPSPC
Trigger: ACAGGGACTTGGCCCTAGCAGAGACAGTGTCTTTCATTTAATGAGTCTGGGTGAAGCCAGAGGTGGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR TCA 72 bp TTCCTCAGAATGAGGGAGGAGATAAGTAGCAGACCCTaGGGTTTGCCACCATGGCAGTGGTCAGGAAGAGTG +
Preference number: 3 (lower is better)
Translates to: FLRMREEISSRP*GLPPWQWSGRV
Trigger: CACTCTTCCTGACCACTGCCATGGTGGCAAACCTCAGGGTCTGCTACTTATCTCCTCCCTCATTCTGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CCA 72 bp AGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTTTaGCAGGAAGGGTGTGTGCTCACTATAGTCAAACGC +
Preference number: 3 (lower is better)
Translates to: SLPVLRQYKTAV*QEGCVLTIVKR
Trigger: GCGTTTGACTATAGTGAGCACACACCCTTCCTGCCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CCA 72 bp GCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTaGAGATGTCATGTAAGCAGGCTGTCGACGGATCCT +
Preference number: 3 (lower is better)
Translates to: ARGYQAQNFPRE*RCHVSRLSTDP
Trigger: AGGATCCGTCGACAGCCTGCTTACATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR CAA 90 bp AATGAGGAAATGAGGTTCTCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAATGGGAAATGGTAGCCTaGCTACACAGCCTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: NEEMRFSDTPPESCCSGQWEMVA*LHSLSF
Trigger: GAAGGAGAGGCTGTGTAGCAAGGCTACCATTTCCCA...TTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGAGAACCTCATTTCCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR CAA 90 bp GCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTTTGGGAGGCAAACTTTATGTaGACTGAGATGCAACCATCT +
Preference number: 3 (lower is better)
Translates to: AQCWQSLPVLRQYKTAVWEANFM*TEMQPS
Trigger: AGATGGTTGCATCTCAGTCAACATAAAGTTTGCCTC...CCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR CAA 90 bp AATGAGGAAATGAGGTTCTCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAAATACAAGACTGCAGTTaGGCAGGAAGGGTGTGTGCT +
Preference number: 3 (lower is better)
Translates to: NEEMRFSDTPPESCCSGQIQDCS*AGRVCA
Trigger: AGCACACACCCTTCCTGCCAAACTGCAGTCTTGTAT...TTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGAGAACCTCATTTCCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR TCA 72 bp CTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTaGCCAATAGCGGCTTGCTTCCCCTTGAACCAACTT +
Preference number: 3 (lower is better)
Translates to: LHSSHKGWQGVK*PIAACFPLNQL
Trigger: AAGTTGGTTCAAGGGGAAGCAAGCCGCTATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
3UTR CCA 72 bp GGGGGTGAATTTTGCCATTTGGCTGCTGAACACATATaGCTGACCAGGGAGGGATGTAATGAGGAAATGAGG +
Preference number: 3 (lower is better)
Translates to: GGEFCHLAAEHI*LTREGCNEEMR
Trigger: CCTCATTTCCTCATTACATCCCTCCCTGGTCAGCCATATGTGTTCAGCAGCCAAATGGCAAAATTCACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR CAA 90 bp AGGAGAGAAAAATCACAGCACGAAGACTTGGTGAAATGTAACCAAGATGTCATTGCCGGGATTGCGCCATaGAACTCCAGCCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: RREKSQHEDLVKCNQDVIAGIAP*NSSLGN
Trigger: GTTGCCCAGGCTGGAGTTCAATGGCGCAATCCCGGC...AATGACATCTTGGTTACATTTCACCAAGTCTTCGTGCTGTGATTTTTCTCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR TCA 72 bp TGGCAGGAAGGGTGTGTGCTCACTATAGTCAAACGCTaGCAAAACATGGGAAATGGTAGCCTTGCTACACAG +
Preference number: 3 (lower is better)
Translates to: WQEGCVLTIVKR*QNMGNGSLATQ
Trigger: CTGTGTAGCAAGGCTACCATTTCCCATGTTTTGTCAGCGTTTGACTATAGTGAGCACACACCCTTCCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR CAA 90 bp AGGGTCTCCAGTGCTTCTCCACACTTGTGGGCCTTCCAGATTAGGGAAGACAATGAGGCAAACTTTATGTaGACTGAGATGCAACCATCT +
Preference number: 3 (lower is better)
Translates to: RVSSASPHLWAFQIREDNEANFM*TEMQPS
Trigger: AGATGGTTGCATCTCAGTCAACATAAAGTTTGCCTC...ATTGTCTTCCCTAATCTGGAAGGCCCACAAGTGTGGAGAAGCACTGGAGACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR-3UTR CAA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCATGTAATCCCAGCACTTaGGGAGGCGGCCAAGGCAGG +
Preference number: 3 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPCNPST*GGGQGR
Trigger: CCTGCCTTGGCCGCCTCCCAAAGTGCTGGGATTACA...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR TCA 72 bp AGAACATTTATCCTTCCCTACCCACTGAGCCAGAGGTaGCAGACACCTTCCTATGACATTCCTCAGAATGAG +
Preference number: 3 (lower is better)
Translates to: RTFILPYPLSQR*QTPSYDIPQNE
Trigger: CTCATTCTGAGGAATGTCATAGGAAGGTGTCTGTCACCTCTGGCTCAGTGGGTAGGGAAGGATAAATGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR GCA 72 bp GTAGGTCTAAACTCCCAGGATTACAAACCTCAGTGCTaGAGCAAGGAACAAGGCATGTGGATTGGTAGTCTA +
Preference number: 3 (lower is better)
Translates to: VGLNSQDYKPQC*SKEQGMWIGSL
Trigger: TAGACTACCAATCCACATGCCTTGTTCCTTGCTGCAGCACTGAGGTTTGTAATCCTGGGAGTTTAGACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR GCA 72 bp TACGTAGGTCTAAACTCCCAGGATTACAAACCTCAGTaGTGCAGCAAGGAACAAGGCATGTGGATTGGTAGT +
Preference number: 3 (lower is better)
Translates to: YVGLNSQDYKPQ*CSKEQGMWIGS
Trigger: ACTACCAATCCACATGCCTTGTTCCTTGCTGCAGCACTGAGGTTTGTAATCCTGGGAGTTTAGACCTACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CCA 72 bp CCTCTTTCTTCCCGTATAGCTTGGAAATGGTCTCTGTaGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGC +
Preference number: 3 (lower is better)
Translates to: PLSSRIAWKWSL*GTLKFRKKTES
Trigger: GCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTTCCAAGCTATACGGGAAGAAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR TCA 72 bp TCTCACTTCAAAGAACATTTATCCTTCCCTACCCACTaGGCCAGAGGTGACAGACACCTTCCTATGACATTC +
Preference number: 3 (lower is better)
Translates to: SHFKEHLSFPTH*ARGDRHLPMTF
Trigger: GAATGTCATAGGAAGGTGTCTGTCACCTCTGGCTCAGTGGGTAGGGAAGGATAAATGTTCTTTGAAGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR TCA 72 bp AGCCACCATCTGACCTCCCAAGCATTTGGTGACCAATaGATGAATAACTCCAATGTCACACATCCTCAGAGA +
Preference number: 3 (lower is better)
Translates to: SHHLTSQAFGDQ*MNNSNVTHPQR
Trigger: TCTCTGAGGATGTGTGACATTGGAGTTATTCATTCATTGGTCACCAAATGCTTGGGAGGTCAGATGGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CCA 72 bp CGACCTAGAGATCTTCGGCTGCATCAAGGAGACACTTaGCTCCTATTACCTCACATAAAACAGTTACTCAGT +
Preference number: 3 (lower is better)
Translates to: RPRDLRLHQGDT*LLLPHIKQLLS
Trigger: ACTGAGTAACTGTTTTATGTGAGGTAATAGGAGCCAAGTGTCTCCTTGATGCAGCCGAAGATCTCTAGGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CAA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCAATACAAGACTGCAGTTaGGCAGGAAGGGTGTGTGCT +
Preference number: 3 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPIQDCS*AGRVCA
Trigger: AGCACACACCCTTCCTGCCAAACTGCAGTCTTGTAT...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR TCA 72 bp TTCCTTAATGCTCCTGGGCCTCAGTTTAATTCAAAATaGTTGGATCAGTGGCTCTCAATCCTTCATGTCCAC +
Preference number: 3 (lower is better)
Translates to: FLNAPGPQFNSK*LDQWLSILHVH
Trigger: GTGGACATGAAGGATTGAGAGCCACTGATCCAATCATTTTGAATTAAACTGAGGCCCAGGAGCATTAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CCA 72 bp TTAATGCTCCTGGGCCTCAGTTTAATTCAAAATGATTaGATCAGTGGCTCTCAATCCTTCATGTCCACCAGA +
Preference number: 3 (lower is better)
Translates to: LMLLGLSLIQND*ISGSQSFMSTR
Trigger: TCTGGTGGACATGAAGGATTGAGAGCCACTGATCCAATCATTTTGAATTAAACTGAGGCCCAGGAGCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CAA 90 bp AGAGGAGGTGGGTTTAGAGGAAAAAGGACTTTTATGACTGCTAGGAGTTTGGTGTATAATCTTGGCTCATaGCAACAAGAGGGAAACTCT +
Preference number: 3 (lower is better)
Translates to: RGGGFRGKRTFMTARSLVYNLGS*QQEGNS
Trigger: AGAGTTTCCCTCTTGTTGCAATGAGCCAAGATTATA...CACCAAACTCCTAGCAGTCATAAAAGTCCTTTTTCCTCTAAACCCACCTCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602496.1
3UTR-3UTR CAA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGCAATCTAACACAGCTTaGAATGTCCAAAATGACATC +
Preference number: 3 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRQSNTA*NVQNDI
Trigger: GATGTCATTTTGGACATTCAAAGCTGTGTTAGATTG...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR-3UTR CAA 90 bp AGGAGAGAAAAATCACAGCACGAAGACTTGGTGAAATGTAACCAAGATGTCATTAAGGCCAAAACTTACTaGCTCCAAATTGACAACCGG +
Preference number: 3 (lower is better)
Translates to: RREKSQHEDLVKCNQDVIKAKTY*LQIDNR
Trigger: CCGGTTGTCAATTTGGAGCAAGTAAGTTTTGGCCTT...AATGACATCTTGGTTACATTTCACCAAGTCTTCGTGCTGTGATTTTTCTCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR GCA 72 bp CTCTGGAAGAAACAAACAATAAGGCCAAAACTTACTTaGTCCAAATTGACAACCGGACAGACTGAAGTTCTT +
Preference number: 3 (lower is better)
Translates to: LWKKQTIRPKLT*SKLTTGQTEVL
Trigger: AAGAACTTCAGTCTGTCCGGTTGTCAATTTGGAGCAAGTAAGTTTTGGCCTTATTGTTTGTTTCTTCCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CCA 72 bp TACCTTGTAATGTGTGTTATTTCTAGTTGCCTCAATTaGACTATAAAATCTGAAGACAGGGAGGGGTCCAAT +
Preference number: 3 (lower is better)
Translates to: YLVMCVISSCLN*TIKSEDREGSN
Trigger: ATTGGACCCCTCCCTGTCTTCAGATTTTATAGTCCAATTGAGGCAACTAGAAATAACACACATTACAAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp TCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTCGAAGGCTGGCGGGGATaGGCGGGCCCGGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLLGPSPCHVWLLFPSLVEGWRG*AGPGVQ
Trigger: CTGGACTCCCGGGCCCGCGCATCCCCGCCAGCCTTC...GACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp GTGTCACATACCTGGGATAGGGTGGCCAGGCCCTTGCACGGGGCCCGGCAGGGATCGCCCACTCCGCGCTaGACTGGAAACCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: VSHTWDRVARPLHGARQGSPTPR*TGNHGS
Trigger: GGACCCATGGTTTCCAGTGCAGCGCGGAGTGGGCGA...TCCCTGCCGGGCCCCGTGCAAGGGCCTGGCCACCCTATCCCAGGTATGTGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp GCCCCTGCTCAGGCAGTCCTGCGCCCACTGCCAGCGAGTCCCTCAAGAGCAGCTCACCTGGGAAGGGCCTaGTCACATGGGAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: APAQAVLRPLPASPSRAAHLGRA*SHGRAG
Trigger: ACCTGCCCTCCCATGTGACCAGGCCCTTCCCAGGTG...AGCTGCTCTTGAGGGACTCGCTGGCAGTGGGCGCAGGACTGCCTGAGCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR GCA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCGAAGGCTGGCGGGGATaGGCGGGCCCGGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSEGWRG*AGPGVQ
Trigger: CTGGACTCCCGGGCCCGCGCATCCCCGCCAGCCTTC...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CTGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGGTGCGGCGGTCGCCCTaGCCCTGGAAGGACTGGCGC +
Preference number: 4 (lower is better)
Translates to: LAPLVLSHPVRTADQAEGVRRSP*PWKDWR
Trigger: GCGCCAGTCCTTCCAGGGGCAGGGCGACCGCCGCAC...CCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp GCTCCCCAGGGTGAGCCTTTCCTGGTCCGACTCACTGGCATCACCATGAGGAGGTGGCTCCTGGCACGCTaGCATCGCCCACTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: APQGEPFLVRLTGITMRRWLLAR*HRPLRA
Trigger: AGCGCGGAGTGGGCGATGCCAGCGTGCCAGGAGCCA...CCTCCTCATGGTGATGCCAGTGAGTCGGACCAGGAAAGGCTCACCCTGGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp TCAGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGGAAGGCTGGCGGGGATaGGCGGGCCCGGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SGKPNAGRAFLSSGNTRLEGWRG*AGPGVQ
Trigger: CTGGACTCCCGGGCCCGCGCATCCCCGCCAGCCTTC...CAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp ACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCTCCTCCCTGCAGATGCGAGCCGAAGGCTGGCGGGGATaGGCGGGCCCGGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TASGTSDVPEFSSLQMRAEGWRG*AGPGVQ
Trigger: CTGGACTCCCGGGCCCGCGCATCCCCGCCAGCCTTC...GGCTCGCATCTGCAGGGAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp CCCTGCAAGTCTGAGGAGCAGATGAGCCACTGGAGGGGGCGAAGTCCCAGAGCCGGCGACGAGGCGTCCTaGAGAGCCTACCACCATGAC +
Preference number: 4 (lower is better)
Translates to: PCKSEEQMSHWRGRSPRAGDEAS*RAYHHD
Trigger: GTCATGGTGGTAGGCTCTGCAGGACGCCTCGTCGCC...GGCTCTGGGACTTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCTGGTCCGACTCACTGGCATCAGCCTGGCGGCAGCTCTaGCCTGTGCACACCGTGGTA +
Preference number: 4 (lower is better)
Translates to: QAEGLPRVSLSWSDSLASAWRQL*PVHTVV
Trigger: TACCACGGTGTGCACAGGGCAGAGCTGCCGCCAGGC...TGATGCCAGTGAGTCGGACCAGGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp CCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCCGCCTTAAGGAAGGCTaGCGGGGATGCGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PLVLSHPVRTADQAEGLPRLKEG*RGCAGP
Trigger: CGGGCCCGCGCATCCCCGCCAGCCTTCCTTAAGGCG...GGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCCGCCTTAAGGAAGGCTaGCGGGGATGCGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: WPLLCFLTLLGLRIRLKGRLKEG*RGCAGP
Trigger: CGGGCCCGCGCATCCCCGCCAGCCTTCCTTAAGGCG...GCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp CTGCGCCCACTGCCAGCGAGTCCCTCAAGAGCAGCTCCTCTTGCGTGGCAGAGTGTCAGACATGGCTCCTaGCACGCTGGCATCGCCCAC +
Preference number: 4 (lower is better)
Translates to: LRPLPASPSRAAPLAWQSVRHGS*HAGIAH
Trigger: GTGGGCGATGCCAGCGTGCCAGGAGCCATGTCTGAC...ACTCTGCCACGCAAGAGGAGCTGCTCTTGAGGGACTCGCTGGCAGTGGGCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR CCA 90 bp CTCTTGCGTGGCAGAGTTCTTCTGCCCATAGAGGTCGGCTCCCCGGGCGACGAGCAATGTAGGTCCCCATaGTGTGCAAGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LLRGRVLLPIEVGSPGDEQCRSP*CASPRR
Trigger: GCGGCGGGGGCTTGCACACCATGGGGACCTACATTG...CTCGTCGCCCGGGGAGCCGACCTCTATGGGCAGAAGAACTCTGCCACGCAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR CCA 90 bp CTCTTGCGTGGCAGAGTTCTTCTGCCCATAGAGGTCGGCTCCCCGGGCGACGAGGCCGGATGCCACGGATaGCAGCGTTCTGCCTCACGA +
Preference number: 4 (lower is better)
Translates to: LLRGRVLLPIEVGSPGDEAGCHG*QRSASR
Trigger: TCGTGAGGCAGAACGCTGCCATCCGTGGCATCCGGC...CTCGTCGCCCGGGGAGCCGACCTCTATGGGCAGAAGAACTCTGCCACGCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR CCA 90 bp CCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCTGGAGCAGCGGGACATCCTaGGGCCCCTGCTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PVRTADQAEGLPRVSLSWSSGTS*GPCSGS
Trigger: ACTGCCTGAGCAGGGGCCCCAGGATGTCCCGCTGCT...CCAGGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCCGGTCGCCCTGCCCCTaGAAGGACTGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: WPLLCFLTLLGLRIRLKGRSPCP*KDWRKA
Trigger: GGCCTTGCGCCAGTCCTTCCAGGGGCAGGGCGACCG...GCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp GCAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGCCACCCGGTCGCCCTGCCCCTaGAAGGACTGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: AALPCAHRGNLATGTFATRSPCP*KDWRKA
Trigger: GGCCTTGCGCCAGTCCTTCCAGGGGCAGGGCGACCG...GGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTCGAAGGAGGCGGCCATaGAGACAGGGGTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: SHPVRTADQAEGLPRVSLRRRRP*RQGCGP
Trigger: GGGACCGCACCCCTGTCTCCATGGCCGCCTCCTTCG...AAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp AGGCCTGCACCATGTAGACCATGCCCTTCAGGTACAGCAGCGGGACATCCTGGGCGAAGGAGGCGGCCATaGAGACAGGGGTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: RPAPCRPCPSGTAAGHPGRRRRP*RQGCGP
Trigger: GGGACCGCACCCCTGTCTCCATGGCCGCCTCCTTCG...CCCAGGATGTCCCGCTGCTGTACCTGAAGGGCATGGTCTACATGGTGCAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR CCA 90 bp CAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCTGGTCCGACTCACTGGCATCAGGTCCCTCTGCCCTGTaGCAAGGAGCCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QAEGLPRVSLSWSDSLASGPSAL*QGAQVQ
Trigger: CTGCACCTGGGCTCCTTGCCACAGGGCAGAGGGACC...TGATGCCAGTGAGTCGGACCAGGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp CTCTTGCGTGGCAGAGTTCTTCTGCCCATAGAGGTCGGCTCCCCGGGCGACGAGCGGGAACGCGCCGCCTaGTTTCTAAGGAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLRGRVLLPIEVGSPGDERERAA*FLRNWG
Trigger: CCCCCAGTTCCTTAGAAACCAGGCGGCGCGTTCCCG...CTCGTCGCCCGGGGAGCCGACCTCTATGGGCAGAAGAACTCTGCCACGCAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR TCA 90 bp CACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCAAGGGCTCCCCAGGGTaGGCCTTTCCTGGTCCGACT +
Preference number: 4 (lower is better)
Translates to: HPVRTADQAEGLPRVSLSKGSPG*AFPGPT
Trigger: AGTCGGACCAGGAAAGGCTCACCCTGGGGAGCCCTT...GGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp CCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCTGGGCAGGTGAGGGTCCCTaGGGGACAGCTTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: PVRTADQAEGLPRVSLSWAGEGP*GTACCP
Trigger: AGGGCAACAAGCTGTCCCTCAGGGACCCTCACCTGC...CCAGGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCTGGTCCGACTCACTGGCATCATCGCCCACTCCGCGCTaGACTGGAAACCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: QAEGLPRVSLSWSDSLASSPTPR*TGNHGS
Trigger: GGACCCATGGTTTCCAGTGCAGCGCGGAGTGGGCGA...TGATGCCAGTGAGTCGGACCAGGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp GCTCCCCAGGGTGAGCCTTTCCTGGTCCGACTCACTGGCATCACCATGAGGAGGCAGTCCTGCGCCCACTaGCAGCGAGTCCCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: APQGEPFLVRLTGITMRRQSCAH*QRVPQE
Trigger: CTCTTGAGGGACTCGCTGGCAGTGGGCGCAGGACTG...CCTCCTCATGGTGATGCCAGTGAGTCGGACCAGGAAAGGCTCACCCTGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCATGGAGACAGGGGTaGGGTCCCAGGTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSPWRQG*GPRCGG
Trigger: ACCGCCGCACCTGGGACCGCACCCCTGTCTCCATGG...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp AGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCACGCCTTAAGGAAGGCTaGCGGGGATGCGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: REAQCWQSLPVLRQYKTARLKEG*RGCAGP
Trigger: CGGGCCCGCGCATCCCCGCCAGCCTTCCTTAAGGCG...TGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp CCCTGCAAGTCTGAGGAGCAGATGAGCCACTGGAGGGGGCGAAGTCCCAGAGCCCCTGGTCCGACTCACTaGCATCACCATGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PCKSEEQMSHWRGRSPRAPGPTH*HHHEEA
Trigger: GGCCTCCTCATGGTGATGCCAGTGAGTCGGACCAGG...GGCTCTGGGACTTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp GTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTAAGGGCTCCCCAGGGTaGGCCTTTCCTGGTCCGACT +
Preference number: 4 (lower is better)
Translates to: VSARAKSLSCLAPVPLPGKGSPG*AFPGPT
Trigger: AGTCGGACCAGGAAAGGCTCACCCTGGGGAGCCCTT...ACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp GGCCCAGCCTGGCCCCCTGGTAGCTCACATACTGACCAAGCCCACAGGAGACAACTCAGACACCCCACCTaGGAGCTGCTGTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GPAWPPGSSHTDQAHRRQLRHPT*ELLFWP
Trigger: TGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGAG...TTGTCTCCTGTGGGCTTGGTCAGTATGTGAGCTACCAGGGGGCCAGGCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCGCCTGGCGGCAGCTCTaGCCTGTGCACACCGTGGTA +
Preference number: 4 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSAWRQL*PVHTVV
Trigger: TACCACGGTGTGCACAGGGCAGAGCTGCCGCCAGGC...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp AGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGCCCCTGCTGTGGCCTaGCGGGCGTACCTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: REAQCWQSLPVLRQYKTAAPAVA*RAYLEP
Trigger: AGGCTCTAGGTACGCCCGGCAGGCCACAGCAGGGGC...TGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp GTGTCACATACCTGGGATAGGGTGGCCAGGCCCTTGCACGGGGCCCGGCAGGGATCCTGTGGTGCTGTGTaGCCCAGAAATGGGAGAACA +
Preference number: 4 (lower is better)
Translates to: VSHTWDRVARPLHGARQGSCGAV*PRNGRT
Trigger: TGTTCTCCCATTTCTGGGGCACACAGCACCACAGGA...TCCCTGCCGGGCCCCGTGCAAGGGCCTGGCCACCCTATCCCAGGTATGTGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp GTGTCACATACCTGGGATAGGGTGGCCAGGCCCTTGCACGGGGCCCGGCAGGGAACCCCACCTGAGAGCTaGTGTTCTGGCCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: VSHTWDRVARPLHGARQGTPPES*CSGQFR
Trigger: TCTGAATTGGCCAGAACAGCAGCTCTCAGGTGGGGT...TCCCTGCCGGGCCCCGTGCAAGGGCCTGGCCACCCTATCCCAGGTATGTGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp CACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCCGTCCTGGTCAGACATaGCTCCTGGCACGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: HPVRTADQAEGLPRVSLSRPGQT*LLARWH
Trigger: ATGCCAGCGTGCCAGGAGCCATGTCTGACCAGGACG...GGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp GTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTTGCCCCTGGAAGGACTaGCGCAAGGCCTGCACCATG +
Preference number: 4 (lower is better)
Translates to: VSARAKSLSCLAPVPLPGCPWKD*RKACTM
Trigger: CATGGTGCAGGCCTTGCGCCAGTCCTTCCAGGGGCA...ACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
3UTR CAA 72 bp GCCCACTGCCAGCGAGTCCCTCAAGAGCAGCTCCTCTaGCGTGGCAGAGTTCTTCTGCCCATAGAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: AHCQRVPQEQLL*RGRVLLPIEVG
Trigger: GCCGACCTCTATGGGCAGAAGAACTCTGCCACGCAAGAGGAGCTGCTCTTGAGGGACTCGCTGGCAGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR TCA 90 bp TGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCACTGGCATCACCATaGGGAGGCCTGGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: WPLLCFLTLLGLRIRLKGSLASP*GGLAAA
Trigger: AGCTGCCGCCAGGCCTCCTCATGGTGATGCCAGTGA...GCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp CTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGACTGCGGATCAGGCTaGAGGGCTCCCCAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLCFLTLLGLRIRLKGSPDCGSG*RAPQGE
Trigger: CTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTC...TGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp GTGTCACATACCTGGGATAGGGTGGCCAGGCCCTTGCACGGGGCCCGGCAGGGACTGAACACATATGGCTaGCCAGGGAGGGATGTAATG +
Preference number: 4 (lower is better)
Translates to: VSHTWDRVARPLHGARQGLNTYG*PGRDVM
Trigger: CATTACATCCCTCCCTGGTCAGCCATATGTGTTCAG...TCCCTGCCGGGCCCCGTGCAAGGGCCTGGCCACCCTATCCCAGGTATGTGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp TTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATAGCGAAGGCTGGCGGGGATaGGCGGGCCCGGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: FQPAFKPQGMARSQVTNSEGWRG*AGPGVQ
Trigger: CTGGACTCCCGGGCCCGCGCATCCCCGCCAGCCTTC...GCTATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR GCA 90 bp CCCTGCAAGTCTGAGGAGCAGATGAGCCACTGGAGGGGGCGAAGTCCCAGAGCCGGCATCCACCGATGTTaGTGCCTTCTCGCAAACCAC +
Preference number: 4 (lower is better)
Translates to: PCKSEEQMSHWRGRSPRAGIHRC*CLLANH
Trigger: GTGGTTTGCGAGAAGGCAGCAACATCGGTGGATGCC...GGCTCTGGGACTTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCACTGCTCAGGCAGTCCTaGGCCCACTGCCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: LLCFLTLLGLRIRLKGSPLLRQS*AHCQRV
Trigger: GACTCGCTGGCAGTGGGCGCAGGACTGCCTGAGCAG...TGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCGCATCCACCACGCTCTaGATGTACAGCCCATCCTCG +
Preference number: 4 (lower is better)
Translates to: HPVRTADQAEGLPRVSLSASTTL*MYSPSS
Trigger: CGAGGATGGGCTGTACATGCAGAGCGTGGTGGATGC...GGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp AGGCCTGCACCATGTAGACCATGCCCTTCAGGTACAGCAGCGGGACATCCTGGGCCCTTGCCTCCTCTCTaGCAAACCAGGGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RPAPCRPCPSGTAAGHPGPLPPL*QTRALC
Trigger: ACAGAGGGCCCTGGTTTGGCAGAGAGGAGGCAAGGG...CCCAGGATGTCCCGCTGCTGTACCTGAAGGGCATGGTCTACATGGTGCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR CCA 90 bp CTGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTGCACTGGAAACCATaGGTCCGACGGGGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LAPLVLSHPVRTADQAEGLHWKP*VRRGLG
Trigger: CCCGAGACCCCGTCGGACCCATGGTTTCCAGTGCAG...CCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp CTGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCACTCCGCGCTGCACTaGAAACCATGGGTCCGACGG +
Preference number: 4 (lower is better)
Translates to: LAPLVLSHPVRTADQAEGHSALH*KPWVRR
Trigger: CCGTCGGACCCATGGTTTCCAGTGCAGCGCGGAGTG...CCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp ACACTGTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCGTCAGACATGGCTCCTaGCACGCTGGCATCGCCCAC +
Preference number: 4 (lower is better)
Translates to: TLSLLGPSPCHVWLLFPSVRHGS*HAGIAH
Trigger: GTGGGCGATGCCAGCGTGCCAGGAGCCATGTCTGAC...GGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGACAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTCGTCCTGGTCAGACATaGCTCCTGGCACGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SHPVRTADQAEGLPRVSLRPGQT*LLARWH
Trigger: ATGCCAGCGTGCCAGGAGCCATGTCTGACCAGGACG...AAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TGGCGGCAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGTGCCCCTGGAAGGACTaGCGCAAGGCCTGCACCATG +
Preference number: 4 (lower is better)
Translates to: WRQLCPVHTVVTWQQEHLCPWKD*RKACTM
Trigger: CATGGTGCAGGCCTTGCGCCAGTCCTTCCAGGGGCA...CAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTGCCTCACACAGGTTCTaGTTGGTGTCGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SHPVRTADQAEGLPRVSLASHRF*LVSGSS
Trigger: GGAGGAGCCCGACACCAACCAGAACCTGTGTGAGGC...AAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp GTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTGAGCAGATGAGCCACTaGAGGGGGCGAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VSARAKSLSCLAPVPLPGEQMSH*RGRSPR
Trigger: TCTGGGACTTCGCCCCCTCCAGTGGCTCATCTGCTC...ACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp TGGCGGCAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGGCCACCCTGCAAGTCTaGGGAGCAGATGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: WRQLCPVHTVVTWQQEHLATLQV*GADEPL
Trigger: CAGTGGCTCATCTGCTCCTCAGACTTGCAGGGTGGC...CAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGCCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp TGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCGCCACCCTGCAAGTCTaGGGAGCAGATGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: WPLLCFLTLLGLRIRLKGATLQV*GADEPL
Trigger: CAGTGGCTCATCTGCTCCTCAGACTTGCAGGGTGGC...GCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp GTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTTCATCGCTAGTGACGTaGCGGATGCCACGGATGGCA +
Preference number: 4 (lower is better)
Translates to: VSARAKSLSCLAPVPLPGSSLVT*RMPRMA
Trigger: TGCCATCCGTGGCATCCGGCACGTCACTAGCGATGA...ACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp TCCTCTCTGCCAAACCAGGGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACCTGCTCAGGCAGTCCTaGGCCCACTGCCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: SSLPNQGPLSYFKSPRAHLLRQS*AHCQRV
Trigger: GACTCGCTGGCAGTGGGCGCAGGACTGCCTGAGCAG...GTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCCCTGGTTTGGCAGAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CTGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCCCTTGCCTCCTCTCTaGCAAACCAGGGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LAPLVLSHPVRTADQAEGPLPPL*QTRALC
Trigger: ACAGAGGGCCCTGGTTTGGCAGAGAGGAGGCAAGGG...CCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TCAGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGGTCAGACATGGCTCCTaGCACGCTGGCATCGCCCAC +
Preference number: 4 (lower is better)
Translates to: SGKPNAGRAFLSSGNTRLVRHGS*HAGIAH
Trigger: GTGGGCGATGCCAGCGTGCCAGGAGCCATGTCTGAC...CAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp CCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCCCTGGTCCGACTCACTaGCATCACCATGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PLVLSHPVRTADQAEGLPPGPTH*HHHEEA
Trigger: GGCCTCCTCATGGTGATGCCAGTGAGTCGGACCAGG...GGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp GTGTCACATACCTGGGATAGGGTGGCCAGGCCCTTGCACGGGGCCCGGCAGGGAAACTTCCCAAGGGAGTaGAGATGTCATGTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSHTWDRVARPLHGARQGNFPRE*RCHVSR
Trigger: CCTGCTTACATGACATCTCCACTCCCTTGGGAAGTT...TCCCTGCCGGGCCCCGTGCAAGGGCCTGGCCACCCTATCCCAGGTATGTGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp TCCTCTCTGCCAAACCAGGGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACTCCCTACCAGGCTCATaGGCTGCGGGTAGTAGCGCG +
Preference number: 4 (lower is better)
Translates to: SSLPNQGPLSYFKSPRAHSLPGS*AAGSSA
Trigger: CGCGCTACTACCCGCAGCTCATGAGCCTGGTAGGGA...GTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCCCTGGTTTGGCAGAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp CCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCTGGACACACCCCCACCCATaGGCATCTGGAAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: PVRTADQAEGLPRVSLSWTHPHP*ASGRNR
Trigger: TCTGTTTCTTCCAGATGCTCATGGGTGGGGGTGTGT...CCAGGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp CTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAAGTCTGAGGAGCAGATaGGCCACTGGAGGGGGCGAA +
Preference number: 4 (lower is better)
Translates to: LLCFLTLLGLRIRLKGSPSLRSR*ATGGGE
Trigger: TTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACT...TGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp AGTCCCTCAAGAGCAGCTCCTCTTGCGTGGCAGAGTTCTTCTGCCCATAGAGGTTCGCCCACTCCGCGCTaGACTGGAAACCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPSRAAPLAWQSSSAHRGSPTPR*TGNHGS
Trigger: GGACCCATGGTTTCCAGTGCAGCGCGGAGTGGGCGA...ACCTCTATGGGCAGAAGAACTCTGCCACGCAAGAGGAGCTGCTCTTGAGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR GCA 90 bp AGTGCCTCACACAGGTTCTGGTTGGTGTCGGGCTCCTCCGTCAGCACCTCCACAGGCATCCACCGATGTTaGTGCCTTCTCGCAAACCAC +
Preference number: 4 (lower is better)
Translates to: SASHRFWLVSGSSVSTSTGIHRC*CLLANH
Trigger: GTGGTTTGCGAGAAGGCAGCAACATCGGTGGATGCC...TGTGGAGGTGCTGACGGAGGAGCCCGACACCAACCAGAACCTGTGTGAGGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR GCA 90 bp AGGGTCTCCAGTGCTTCTCCACACTTGTGGGCCTTCCAGATTAGGGAAGACAATGCCCCTGCTGTGGCCTaGCGGGCGTACCTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RVSSASPHLWAFQIREDNAPAVA*RAYLEP
Trigger: AGGCTCTAGGTACGCCCGGCAGGCCACAGCAGGGGC...ATTGTCTTCCCTAATCTGGAAGGCCCACAAGTGTGGAGAAGCACTGGAGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp AGGAGACAAATTGGTGCCTCTGGTCAACCCTTCCCCCTCCTCTCACTTCCTACCCAGCTCAGCAGGCCATaGCCAGTCAGGGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RRQIGASGQPFPLLSLPTQLSRP*PVRGKR
Trigger: CCTCTTGCCCCTGACTGGGCATGGCCTGCTGAGCTG...GGTAGGAAGTGAGAGGAGGGGGAAGGGTTGACCAGAGGCACCAATTTGTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp GGCCCAGCCTGGCCCCCTGGTAGCTCACATACTGACCAAGCCCACAGGAGACAACAGGAGACAAATTGGTaGCTCTGGTCAACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GPAWPPGSSHTDQAHRRQQETNW*LWSTLP
Trigger: GGGAAGGGTTGACCAGAGGCACCAATTTGTCTCCTG...TTGTCTCCTGTGGGCTTGGTCAGTATGTGAGCTACCAGGGGGCCAGGCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp TCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAATTCAGAAGCCTCCTGCTACACTCCGCGCTGCACTaGAAACCATGGGTCCGACGG +
Preference number: 4 (lower is better)
Translates to: SDTPPESCCSGQFRSLLLHSALH*KPWVRR
Trigger: CCGTCGGACCCATGGTTTCCAGTGCAGCGCGGAGTG...TAGCAGGAGGCTTCTGAATTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp CCTTTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATTGGCTCCTGGCACGCTaGCATCGCCCACTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: PFQPAFKPQGMARSQVTNWLLAR*HRPLRA
Trigger: AGCGCGGAGTGGGCGATGCCAGCGTGCCAGGAGCCA...ATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp ACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCTCCTCCCTGCAGATGCGAGCCCGTCCTGGTCAGACATaGCTCCTGGCACGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: TASGTSDVPEFSSLQMRARPGQT*LLARWH
Trigger: ATGCCAGCGTGCCAGGAGCCATGTCTGACCAGGACG...GGCTCGCATCTGCAGGGAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp GCAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGCCACCCACACAGGTTCTGGTTaGTGTCGGGCTCCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: AALPCAHRGNLATGTFATHTGSG*CRAPPS
Trigger: TGACGGAGGAGCCCGACACCAACCAGAACCTGTGTG...GGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp ACACTGTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCACACAGGTTCTGGTTaGTGTCGGGCTCCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: TLSLLGPSPCHVWLLFPSHTGSG*CRAPPS
Trigger: TGACGGAGGAGCCCGACACCAACCAGAACCTGTGTG...GGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGACAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp CTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGCCTCACACAGGTTCTaGTTGGTGTCGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLCFLTLLGLRIRLKGSPASHRF*LVSGSS
Trigger: GGAGGAGCCCGACACCAACCAGAACCTGTGTGAGGC...TGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp CCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGTCCCTGTCATGTCTaGCTCCTGTTCCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PLVLSHPVRTADQAEGLPSPCHV*LLFPSL
Trigger: CAGGGAGGGGAACAGGAGCCAGACATGACAGGGACT...GGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp GCGTCCTGCAGAGCCTACCACCATGACTTCATGCACAAAGGCGCCTGGCATGTTGAGCAGATGAGCCACTaGAGGGGGCGAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ASCRAYHHDFMHKGAWHVEQMSH*RGRSPR
Trigger: TCTGGGACTTCGCCCCCTCCAGTGGCTCATCTGCTC...AACATGCCAGGCGCCTTTGTGCATGAAGTCATGGTGGTAGGCTCTGCAGGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR CCA 90 bp CTGCGCCCACTGCCAGCGAGTCCCTCAAGAGCAGCTCCTCTTGCGTGGCAGAGTCACACCGTGGTAACCTaGCAACAGGAACATTTGCCA +
Preference number: 4 (lower is better)
Translates to: LRPLPASPSRAAPLAWQSHTVVT*QQEHLP
Trigger: TGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTG...ACTCTGCCACGCAAGAGGAGCTGCTCTTGAGGGACTCGCTGGCAGTGGGCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR TCA 90 bp CTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGCCTCACGAATGTCTTaGGCAGCCCGTGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LLCFLTLLGLRIRLKGSPASRMS*AARAPS
Trigger: AGAAGGTGCACGGGCTGCTCAAGACATTCGTGAGGC...TGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp CTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAATCGGCTCGACCTCTTaGTGGCATCCACCACGCTCT +
Preference number: 4 (lower is better)
Translates to: LLCFLTLLGLRIRLKGSPIGSTS*WHPPRS
Trigger: AGAGCGTGGTGGATGCCATCAAGAGGTCGAGCCGAT...TGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp GCCCCTGCTCAGGCAGTCCTGCGCCCACTGCCAGCGAGTCCCTCAAGAGCAGCTCCCAGACTCATTAAATaGAAGACACTGTCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: APAQAVLRPLPASPSRAAPRLIK*KTLSLL
Trigger: TAGCAGAGACAGTGTCTTTCATTTAATGAGTCTGGG...AGCTGCTCTTGAGGGACTCGCTGGCAGTGGGCGCAGGACTGCCTGAGCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR TCA 90 bp TCAGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGGTGGATACTGCAGTGTaGGGCAGAGAGGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SGKPNAGRAFLSSGNTRLVDTAV*GREEVG
Trigger: ACCCACCTCCTCTCTGCCTCACACTGCAGTATCCAC...CAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCGGATGGCAGCGTTCTaGCTCACGAATGTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSRMAAF*LTNVLS
Trigger: GCTCAAGACATTCGTGAGGCAGAACGCTGCCATCCG...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp AGGCCTGCACCATGTAGACCATGCCCTTCAGGTACAGCAGCGGGACATCCTGGGACCACCATGACTTCATaGACAAAGGCGCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: RPAPCRPCPSGTAAGHPGTTMTS*TKAPGM
Trigger: CATGCCAGGCGCCTTTGTGCATGAAGTCATGGTGGT...CCCAGGATGTCCCGCTGCTGTACCTGAAGGGCATGGTCTACATGGTGCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR GCA 90 bp TCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTCAAGAGCAGCTCCTCTTaGGTGGCAGAGTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLLGPSPCHVWLLFPSLVKSSSS*VAEFFC
Trigger: GCAGAAGAACTCTGCCACGCAAGAGGAGCTGCTCTT...GACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CAGGTGAGGGTCCCTGAGGGACAGCTTGTTGCCCTCACTGTTCCTGAGATGCCCAGCTGGCCCCTCTTGTaGTTTCTCACCCTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: QVRVPEGQLVALTVPEMPSWPLL*FLTLLG
Trigger: TCCTAACAGGGTGAGAAAGCACAAGAGGGGCCAGCT...GGGCATCTCAGGAACAGTGAGGGCAACAAGCTGTCCCTCAGGGACCCTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp GCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTTTGGGCAGACCCTGAGGTTTaGCACCATGGCAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: AQCWQSLPVLRQYKTAVWADPEV*HHGSGQ
Trigger: CTGACCACTGCCATGGTGGCAAACCTCAGGGTCTGC...CCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp AAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGCCTCCAGCGCCTTAAGGAAGGCTaGCGGGGATGCGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: KWSLWGTLKFRKKTESLQRLKEG*RGCAGP
Trigger: CGGGCCCGCGCATCCCCGCCAGCCTTCCTTAAGGCG...CTGGAGGCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp GCAAGGAGTCAAGTGACCAATAGCGGCTTGCTTCCCCTTGAACCAACTTGCTGCCACTCCGCGCTGCACTaGAAACCATGGGTCCGACGG +
Preference number: 4 (lower is better)
Translates to: ARSQVTNSGLLPLEPTCCHSALH*KPWVRR
Trigger: CCGTCGGACCCATGGTTTCCAGTGCAGCGCGGAGTG...GCAGCAAGTTGGTTCAAGGGGAAGCAAGCCGCTATTGGTCACTTGACTCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGTGGCTCCTGGCACGCTaGCATCGCCCACTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWWLLAR*HRPLRA
Trigger: AGCGCGGAGTGGGCGATGCCAGCGTGCCAGGAGCCA...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCATAGGTTGTTCCGCTaGAGTGCCTCACACAGGTTC +
Preference number: 4 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSHRLFR*SASHRF
Trigger: GAACCTGTGTGAGGCACTTCAGCGGAACAACCTATG...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp CAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCGACTGCGGATCAGGCTaGAGGGCTCCCCAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QERNKTSHHFSSGLSRAGDCGSG*RAPQGE
Trigger: CTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTC...GCCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp AGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCACCACTGAGCCAGAGGTaGCAGACACCTTCCTATGAC +
Preference number: 4 (lower is better)
Translates to: REAQCWQSLPVLRQYKTAPLSQR*QTPSYD
Trigger: GTCATAGGAAGGTGTCTGTCACCTCTGGCTCAGTGG...TGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp GAGAGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTTCCAGCCTGCATTCCGGCTTGCTTCCCCTTaGACCAACTTGCTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: ESLQSSGSGHTSPFQPAFRLASP*TNLLLK
Trigger: CTTTAGCAGCAAGTTGGTTCAAGGGGAAGCAAGCCG...GAATGCAGGCTGGAAAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR GCA 90 bp CCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCTGGATCCACCGATGTTGCTaGCTTCTCGCAAACCACATT +
Preference number: 4 (lower is better)
Translates to: PVRTADQAEGLPRVSLSWIHRCC*LLANHI
Trigger: AATGTGGTTTGCGAGAAGGCAGCAACATCGGTGGAT...CCAGGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCACCACCATGACTTCATaGACAAAGGCGCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSTTMTS*TKAPGM
Trigger: CATGCCAGGCGCCTTTGTGCATGAAGTCATGGTGGT...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp GTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTGTTGTTCCGCTGAAGTaGCTCACACAGGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: VSARAKSLSCLAPVPLPGVVPLK*LTQVLV
Trigger: AACCAGAACCTGTGTGAGGCACTTCAGCGGAACAAC...ACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCCCTCCCTGGTCCCTCTaGCCTGTGGCAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QERNKTSHHFSSGLSRAGPPWSL*PVARSP
Trigger: TGGGCTCCTTGCCACAGGGCAGAGGGACCAGGGAGG...GCCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp TGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCGGCAACAGGAACATTTaGCACCCTGCAAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: WPLLCFLTLLGLRIRLKGGNRNI*HPASLR
Trigger: CCTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCC...GCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp GTTGTTCCGCTGAAGTGCCTCACACAGGTTCTGGTTGGTGTCGGGCTCCTCCGTAGCTGGCCCCTCTTGTaGTTTCTCACCCTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: VVPLKCLTQVLVGVGLLRSWPLL*FLTLLG
Trigger: TCCTAACAGGGTGAGAAAGCACAAGAGGGGCCAGCT...ACGGAGGAGCCCGACACCAACCAGAACCTGTGTGAGGCACTTCAGCGGAACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR GCA 90 bp TCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTCTCACTGTTCCTGAGATaGCCCAGCCCAAGAACGAAA +
Preference number: 4 (lower is better)
Translates to: SLLGPSPCHVWLLFPSLVSLFLR*PSPRTK
Trigger: TTTCGTTCTTGGGCTGGGGCATCTCAGGAACAGTGA...GACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp AGTGCCTCACACAGGTTCTGGTTGGTGTCGGGCTCCTCCGTCAGCACCTCCACATCACTGTTCCTGAGATaGCCCAGCCCAAGAACGAAA +
Preference number: 4 (lower is better)
Translates to: SASHRFWLVSGSSVSTSTSLFLR*PSPRTK
Trigger: TTTCGTTCTTGGGCTGGGGCATCTCAGGAACAGTGA...TGTGGAGGTGCTGACGGAGGAGCCCGACACCAACCAGAACCTGTGTGAGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR GCA 90 bp CCTTTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATGACATGATCTGCCCCTaGTGTGGCCTGCCGGGCGTA +
Preference number: 4 (lower is better)
Translates to: PFQPAFKPQGMARSQVTNDMICP*CGLPGV
Trigger: TACGCCCGGCAGGCCACAGCAGGGGCAGATCATGTC...ATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp TCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATGACATGATCTGCCCCTaGTGTGGCCTGCCGGGCGTA +
Preference number: 4 (lower is better)
Translates to: SGARGYQAQNFPREWRCHDMICP*CGLPGV
Trigger: TACGCCCGGCAGGCCACAGCAGGGGCAGATCATGTC...ATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp ATGCCCAGTCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGACAGAGTTCTCCTCCCTaGAGATGCGAGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: MPSQGQEVTKPKTSQGSGQSSPP*RCEPRK
Trigger: CTTCCTGGGCTCGCATCTGCAGGGAGGAGAACTCTG...TCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGACTGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp TCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAATTCAGAAGCCTCCTGCTACAGAGTTCTCCTCCCTaGAGATGCGAGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SDTPPESCCSGQFRSLLLQSSPP*RCEPRK
Trigger: CTTCCTGGGCTCGCATCTGCAGGGAGGAGAACTCTG...TAGCAGGAGGCTTCTGAATTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp TCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATCAGCTCAGCAGGCCATaGCCAGTCAGGGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SGARGYQAQNFPREWRCHQLSRP*PVRGKR
Trigger: CCTCTTGCCCCTGACTGGGCATGGCCTGCTGAGCTG...ATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp CCTGTAGTCCTGGCTACTTGCAAAGCCGAGGCAGGAGTATCGCTTGAACCTGGGTCCTACCCCCACCTCTaGCACCTTGACCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PVVLATCKAEAGVSLEPGSYPHL*HLDPEE
Trigger: TTCTTCAGGGTCAAGGTGGCAGAGGTGGGGGTAGGA...CCCAGGTTCAAGCGATACTCCTGCCTCGGCTTTGCAAGTAGCCAGGACTACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp CCTTTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATCACTCCGCGCTGCACTaGAAACCATGGGTCCGACGG +
Preference number: 4 (lower is better)
Translates to: PFQPAFKPQGMARSQVTNHSALH*KPWVRR
Trigger: CCGTCGGACCCATGGTTTCCAGTGCAGCGCGGAGTG...ATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp CCTTTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATGTCAGACATGGCTCCTaGCACGCTGGCATCGCCCAC +
Preference number: 4 (lower is better)
Translates to: PFQPAFKPQGMARSQVTNVRHGS*HAGIAH
Trigger: GTGGGCGATGCCAGCGTGCCAGGAGCCATGTCTGAC...ATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCATCTTCCAAACGTCCTaGTCAGACATGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSIFQTS*SDMAPG
Trigger: GCCAGGAGCCATGTCTGACCAGGACGTTTGGAAGAT...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp GCAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGCCACCATCTTCCAAACGTCCTaGTCAGACATGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AALPCAHRGNLATGTFATIFQTS*SDMAPG
Trigger: GCCAGGAGCCATGTCTGACCAGGACGTTTGGAAGAT...GGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp AACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCCCCTCAATGTAGGTCCCCATaGTGTGCAAGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NETKLLIISPQASAELAPQCRSP*CASPRR
Trigger: GCGGCGGGGGCTTGCACACCATGGGGACCTACATTG...AGGGGCCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp CTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGCAGCTCCTCTTGCGTaGCAGAGTTCTTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LLCFLTLLGLRIRLKGSPAAPLA*QSSSAH
Trigger: ATGGGCAGAAGAACTCTGCCACGCAAGAGGAGCTGC...TGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TCCTCTCTGCCAAACCAGGGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACAGTCCCTGTCATGTCTaGCTCCTGTTCCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SSLPNQGPLSYFKSPRAHSPCHV*LLFPSL
Trigger: CAGGGAGGGGAACAGGAGCCAGACATGACAGGGACT...GTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCCCTGGTTTGGCAGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAATTCAGAAGCCTCCTGCTAAGGGAAGCCCAATGCTaGCAGAGCCTTCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SDTPPESCCSGQFRSLLLREAQC*QSLPVL
Trigger: GAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCT...TAGCAGGAGGCTTCTGAATTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp GCAAGGAGTCAAGTGACCAATAGCGGCTTGCTTCCCCTTGAACCAACTTGCTGCGAGCCTCCAGAGTTCTaGCTCCGGACACACCTCACC +
Preference number: 4 (lower is better)
Translates to: ARSQVTNSGLLPLEPTCCEPPEF*LRTHLT
Trigger: GGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTC...GCAGCAAGTTGGTTCAAGGGGAAGCAAGCCGCTATTGGTCACTTGACTCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp AGGGTCTCCAGTGCTTCTCCACACTTGTGGGCCTTCCAGATTAGGGAAGACAATATACCTGGGATAGGGTaGCCAGGCCCTTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: RVSSASPHLWAFQIREDNIPGIG*PGPCTG
Trigger: CCCCGTGCAAGGGCCTGGCCACCCTATCCCAGGTAT...ATTGTCTTCCCTAATCTGGAAGGCCCACAAGTGTGGAGAAGCACTGGAGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp TTTTTCATGCCCTCCCCAAGCACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCATACCTGGGATAGGGTaGCCAGGCCCTTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: FFMPSPSTASGTSDVPEFIPGIG*PGPCTG
Trigger: CCCCGTGCAAGGGCCTGGCCACCCTATCCCAGGTAT...GAACTCTGGGACATCACTTGTCCCTGAAGCAGTGCTTGGGGAGGGCATGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CAA 72 bp CCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTaGCCACCCTGCAAGTCTGAGGAGCAGATGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PVHTVVTWQQEH*PPCKSEEQMSH
Trigger: GTGGCTCATCTGCTCCTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp CTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAACACACCCCCACCCATaGGCATCTGGAAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: LLCFLTLLGLRIRLKGSPTHPHP*ASGRNR
Trigger: TCTGTTTCTTCCAGATGCTCATGGGTGGGGGTGTGT...TGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp TCCTCTCTGCCAAACCAGGGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACCAGAGCCTACCACCATaGCTTCATGCACAAAGGCGC +
Preference number: 4 (lower is better)
Translates to: SSLPNQGPLSYFKSPRAHQSLPP*LHAQRR
Trigger: GCGCCTTTGTGCATGAAGTCATGGTGGTAGGCTCTG...GTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCCCTGGTTTGGCAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp CAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCTCACTGGCATCACCATaGGGAGGCCTGGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QERNKTSHHFSSGLSRAGSLASP*GGLAAA
Trigger: AGCTGCCGCCAGGCCTCCTCATGGTGATGCCAGTGA...GCCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp CCCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCAGGTGAGGGTCCCTaGGGGACAGCTTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: PKNETKLLIISPQASAELAGEGP*GTACCP
Trigger: AGGGCAACAAGCTGTCCCTCAGGGACCCTCACCTGC...CAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp AGGGTCTCCAGTGCTTCTCCACACTTGTGGGCCTTCCAGATTAGGGAAGACAATCTCAGAGGAGAGGAGTaGCCCTCAGAGGACTGCCCA +
Preference number: 4 (lower is better)
Translates to: RVSSASPHLWAFQIREDNLRGEE*PSEDCP
Trigger: TGGGCAGTCCTCTGAGGGTCACTCCTCTCCTCTGAG...ATTGTCTTCCCTAATCTGGAAGGCCCACAAGTGTGGAGAAGCACTGGAGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp GCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTTTGGATAAGTAGCAGACCCTaGGGTTTGCCACCATGGCAG +
Preference number: 4 (lower is better)
Translates to: AQCWQSLPVLRQYKTAVWISSRP*GLPPWQ
Trigger: CTGCCATGGTGGCAAACCTCAGGGTCTGCTACTTAT...CCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp GCAAGGAGTCAAGTGACCAATAGCGGCTTGCTTCCCCTTGAACCAACTTGCTGCTCCTTCCCTACCCACTaGGCCAGAGGTGACAGACAC +
Preference number: 4 (lower is better)
Translates to: ARSQVTNSGLLPLEPTCCSFPTH*ARGDRH
Trigger: GTGTCTGTCACCTCTGGCTCAGTGGGTAGGGAAGGA...GCAGCAAGTTGGTTCAAGGGGAAGCAAGCCGCTATTGGTCACTTGACTCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp AGGGTCTCCAGTGCTTCTCCACACTTGTGGGCCTTCCAGATTAGGGAAGACAATCTCAGACACCCCACCTaGGAGCTGCTGTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RVSSASPHLWAFQIREDNLRHPT*ELLFWP
Trigger: TGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGAG...ATTGTCTTCCCTAATCTGGAAGGCCCACAAGTGTGGAGAAGCACTGGAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp AGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATGTAAGCAGGCTTCGCCCACTCCGCGCTaGACTGGAAACCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: RLPSPKLPKGVEMSCKQASPTPR*TGNHGS
Trigger: GGACCCATGGTTTCCAGTGCAGCGCGGAGTGGGCGA...AGCCTGCTTACATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp CCCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGGCGACGAGGCGTCCTaGAGAGCCTACCACCATGAC +
Preference number: 4 (lower is better)
Translates to: PKNETKLLIISPQASAELGDEAS*RAYHHD
Trigger: GTCATGGTGGTAGGCTCTGCAGGACGCCTCGTCGCC...CAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CCCCAAGCACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCTCCTCCCTGCAGACCGGCAATACAAGACTaGAGTTTGGCAGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PQALLQGQVMSQSSPPCRPAIQD*SLAGRV
Trigger: CACCCTTCCTGCCAAACTGCAGTCTTGTATTGCCGG...TCTGCAGGGAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCAGTGCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp GCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTTTGGCGACAGAGTGGATACTaGAGTGTGAGGCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: AQCWQSLPVLRQYKTAVWRQSGY*SVRQRG
Trigger: TCCTCTCTGCCTCACACTGCAGTATCCACTCTGTCG...CCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp ACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCTCCTCCCTGCAGATGCGAGCCCGACAGAGTGGATACTaGAGTGTGAGGCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: TASGTSDVPEFSSLQMRARQSGY*SVRQRG
Trigger: TCCTCTCTGCCTCACACTGCAGTATCCACTCTGTCG...GGCTCGCATCTGCAGGGAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp TTTAGATGGGGACTCGCTTTGTTACCCAGTGGTATAATCTTGGCTCATTGCAACCGCCTTAAGGAAGGCTaGCGGGGATGCGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FRWGLALLPSGIILAHCNRLKEG*RGCAGP
Trigger: CGGGCCCGCGCATCCCCGCCAGCCTTCCTTAAGGCG...GTTGCAATGAGCCAAGATTATACCACTGGGTAACAAAGCGAGTCCCCATCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCTGCACTGGAAACCATaGGTCCGACGGGGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWLHWKP*VRRGLG
Trigger: CCCGAGACCCCGTCGGACCCATGGTTTCCAGTGCAG...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCACTCCGCGCTGCACTaGAAACCATGGGTCCGACGG +
Preference number: 4 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWHSALH*KPWVRR
Trigger: CCGTCGGACCCATGGTTTCCAGTGCAGCGCGGAGTG...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp GCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTTTGGATCTTCCAAACGTCCTaGTCAGACATGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AQCWQSLPVLRQYKTAVWIFQTS*SDMAPG
Trigger: GCCAGGAGCCATGTCTGACCAGGACGTTTGGAAGAT...CCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGGCCGGATGCCACGGATaGCAGCGTTCTGCCTCACGA +
Preference number: 4 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWAGCHG*QRSASR
Trigger: TCGTGAGGCAGAACGCTGCCATCCGTGGCATCCGGC...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp GTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTATGCACAAAGGCGCCTaGCATGTTGAAGTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: VSARAKSLSCLAPVPLPGMHKGA*HVEVEC
Trigger: ACACTCAACTTCAACATGCCAGGCGCCTTTGTGCAT...ACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp AGTCCCTCAAGAGCAGCTCCTCTTGCGTGGCAGAGTTCTTCTGCCCATAGAGGTGCAGCTCCTCTTGCGTaGCAGAGTTCTTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SPSRAAPLAWQSSSAHRGAAPLA*QSSSAH
Trigger: ATGGGCAGAAGAACTCTGCCACGCAAGAGGAGCTGC...ACCTCTATGGGCAGAAGAACTCTGCCACGCAAGAGGAGCTGCTCTTGAGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR CCA 90 bp CAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCCACCTGGGAAGGGCCTaGTCACATGGGAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QERNKTSHHFSSGLSRAGHLGRA*SHGRAG
Trigger: ACCTGCCCTCCCATGTGACCAGGCCCTTCCCAGGTG...GCCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAATTCAGAAGCCTCCTGCTAAGCCTCTCCTTCCTGTaGTGCTGTGTGCCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SDTPPESCCSGQFRSLLLSLSFL*CCVPQK
Trigger: TTTCTGGGGCACACAGCACCACAGGAAGGAGAGGCT...TAGCAGGAGGCTTCTGAATTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp GCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTTTGGAGTGGTCAGGAAGAGTaGAGGACAACCTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: AQCWQSLPVLRQYKTAVWSGQEE*RTTSWH
Trigger: GTGCCATGAGGTTGTCCTCCACTCTTCCTGACCACT...CCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp TCAGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGATAATGCCTCGCTGCTaGCGACAGAGTGGATACTGC +
Preference number: 4 (lower is better)
Translates to: SGKPNAGRAFLSSGNTRLIMPRC*RQSGYC
Trigger: GCAGTATCCACTCTGTCGCCAGCAGCGAGGCATTAT...CAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp GAGAGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTTCCAGCCTGCATTCCCACAGGAGACAAATTaGTGCCTCTGGTCAACCCTT +
Preference number: 4 (lower is better)
Translates to: ESLQSSGSGHTSPFQPAFPQETN*CLWSTL
Trigger: AAGGGTTGACCAGAGGCACCAATTTGTCTCCTGTGG...GAATGCAGGCTGGAAAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CAA 72 bp GTAGCTCACATACTGACCAAGCCCACAGGAGACAAATaGGTGCCTCTGGTCAACCCTTCCCCCTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: VAHILTKPTGDK*VPLVNPSPSSH
Trigger: GTGAGAGGAGGGGGAAGGGTTGACCAGAGGCACCAATTTGTCTCCTGTGGGCTTGGTCAGTATGTGAGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp CCCCAAGCACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCTCCTCCCTGCAGACCTCTGGCATGGATATaGTCTTCCAAACGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PQALLQGQVMSQSSPPCRPLAWI*SSKRPG
Trigger: ACCAGGACGTTTGGAAGATCATATCCATGCCAGAGG...TCTGCAGGGAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCAGTGCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp ACCGTGGTAACCTGGCAACAGGAACATTTGCCACCCTGCAAGTCTGAGGAGCAGCATAGGTTGTTCCGCTaGAGTGCCTCACACAGGTTC +
Preference number: 4 (lower is better)
Translates to: TVVTWQQEHLPPCKSEEQHRLFR*SASHRF
Trigger: GAACCTGTGTGAGGCACTTCAGCGGAACAACCTATG...CTGCTCCTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp CACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCCCCAGACTCATTAAATaGAAGACACTGTCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: HPVRTADQAEGLPRVSLSPRLIK*KTLSLL
Trigger: TAGCAGAGACAGTGTCTTTCATTTAATGAGTCTGGG...GGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp AGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATGTAAGCAGGCTCTCAGAGGAGAGGAGTaGCCCTCAGAGGACTGCCCA +
Preference number: 4 (lower is better)
Translates to: RLPSPKLPKGVEMSCKQALRGEE*PSEDCP
Trigger: TGGGCAGTCCTCTGAGGGTCACTCCTCTCCTCTGAG...AGCCTGCTTACATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp TCAGGAAGAAGACTGAGAGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTGGGGCCAAAGTAGGATaGTTGCCTGAGGTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: SGRRLRASRVLAPDTPHLGAKVG*LPEVRS
Trigger: ACTCCTAACCTCAGGCAATCATCCTACTTTGGCCCC...AAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTCTCAGTCTTCTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp TTTTTCATGCCCTCCCCAAGCACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCGTGGATACTGCAGTGTaGGGCAGAGAGGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: FFMPSPSTASGTSDVPEFVDTAV*GREEVG
Trigger: ACCCACCTCCTCTCTGCCTCACACTGCAGTATCCAC...GAACTCTGGGACATCACTTGTCCCTGAAGCAGTGCTTGGGGAGGGCATGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp ACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCTCCTCCCTGCAGATGCGAGCCCTGAACACATATGGCTaGCCAGGGAGGGATGTAATG +
Preference number: 4 (lower is better)
Translates to: TASGTSDVPEFSSLQMRALNTYG*PGRDVM
Trigger: CATTACATCCCTCCCTGGTCAGCCATATGTGTTCAG...GGCTCGCATCTGCAGGGAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp TCCTCTCTGCCAAACCAGGGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACAAGAGCAGCTCCTCTTaGGTGGCAGAGTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSLPNQGPLSYFKSPRAHKSSSS*VAEFFC
Trigger: GCAGAAGAACTCTGCCACGCAAGAGGAGCTGCTCTT...GTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCCCTGGTTTGGCAGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp ACTGTTCCTGAGATGCCCCAGCCCAAGAACGAAACAAAACTTCTCATCATTTCTCCATGGAGACAGGGGTaGGGTCCCAGGTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: TVPEMPQPKNETKLLIISPWRQG*GPRCGG
Trigger: ACCGCCGCACCTGGGACCGCACCCCTGTCTCCATGG...AGAAATGATGAGAAGTTTTGTTTCGTTCTTGGGCTGGGGCATCTCAGGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp ACCGTGGTAACCTGGCAACAGGAACATTTGCCACCCTGCAAGTCTGAGGAGCAGGGCAACAGGAACATTTaGCACCCTGCAAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: TVVTWQQEHLPPCKSEEQGNRNI*HPASLR
Trigger: CCTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCC...CTGCTCCTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp TCATGTCCACCAGAGTCACCTGCAAGGCTTGTTCAGACACAGATAGCTGGATCCGGGACCACAGTCGCGTaGCACCATGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: SCPPESPARLVQTQIAGSGTTVA*HHAWLI
Trigger: AATTAGCCAGGCATGGTGGCACGCGACTGTGGTCCC...GGATCCAGCTATCTGTGTCTGAACAAGCCTTGCAGGTGACTCTGGTGGACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp TCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAATTCAGAAGCCTCCTGCTAATGATCACTGCTCACTaGAGCCTCTATCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SDTPPESCCSGQFRSLLLMITAH*SLYLLG
Trigger: GCCCAGGAGATAGAGGCTGCAGTGAGCAGTGATCAT...TAGCAGGAGGCTTCTGAATTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp TCATGTCCACCAGAGTCACCTGCAAGGCTTGTTCAGACACAGATAGCTGGATCCCTGGAGGGTCTCCAGTaGTTCTCCACACTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SCPPESPARLVQTQIAGSLEGLQ*FSTLVG
Trigger: GCCCACAAGTGTGGAGAAGCACTGGAGACCCTCCAG...GGATCCAGCTATCTGTGTCTGAACAAGCCTTGCAGGTGACTCTGGTGGACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp AAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGCCTCCAGCTGCACTGGAAACCATaGGTCCGACGGGGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: KWSLWGTLKFRKKTESLQLHWKP*VRRGLG
Trigger: CCCGAGACCCCGTCGGACCCATGGTTTCCAGTGCAG...CTGGAGGCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp TGCAACCATCTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCTGGCTCCTGGCACGCTaGCATCGCCCACTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: CNHLQPLDGCLLEYFLNFWLLAR*HRPLRA
Trigger: AGCGCGGAGTGGGCGATGCCAGCGTGCCAGGAGCCA...GAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAGATGGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp AGAGGAGGTGGGTTTAGAGGAAAAAGGACTTTTATGACTGCTAGGAGTTTGGTGTGGCTCCTGGCACGCTaGCATCGCCCACTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: RGGGFRGKRTFMTARSLVWLLAR*HRPLRA
Trigger: AGCGCGGAGTGGGCGATGCCAGCGTGCCAGGAGCCA...CACCAAACTCCTAGCAGTCATAAAAGTCCTTTTTCCTCTAAACCCACCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp AAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGCCTCCAGGTCAGACATGGCTCCTaGCACGCTGGCATCGCCCAC +
Preference number: 4 (lower is better)
Translates to: KWSLWGTLKFRKKTESLQVRHGS*HAGIAH
Trigger: GTGGGCGATGCCAGCGTGCCAGGAGCCATGTCTGAC...CTGGAGGCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp GTTGTTCCGCTGAAGTGCCTCACACAGGTTCTGGTTGGTGTCGGGCTCCTCCGTCCTCACAAGAGCCTCTaGCATGGATATGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: VVPLKCLTQVLVGVGLLRPHKSL*HGYDLP
Trigger: TGGAAGATCATATCCATGCCAGAGGCTCTTGTGAGG...ACGGAGGAGCCCGACACCAACCAGAACCTGTGTGAGGCACTTCAGCGGAACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR CCA 90 bp CCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCCCACCCATGAGCATCTaGAAGAAACAGAAGTCATCG +
Preference number: 4 (lower is better)
Translates to: PLVLSHPVRTADQAEGLPPPMSI*KKQKSS
Trigger: CGATGACTTCTGTTTCTTCCAGATGCTCATGGGTGG...GGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp GCAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGCCACCCCACCCATGAGCATCTaGAAGAAACAGAAGTCATCG +
Preference number: 4 (lower is better)
Translates to: AALPCAHRGNLATGTFATPPMSI*KKQKSS
Trigger: CGATGACTTCTGTTTCTTCCAGATGCTCATGGGTGG...GGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATAGCGTAATCCCAGCACTTTaGGAGGCGGCCAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FQPAFKPQGMARSQVTNSVIPAL*EAAKAG
Trigger: ACCTGCCTTGGCCGCCTCCCAAAGTGCTGGGATTAC...GCTATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp GAGAGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTTCCAGCCTGCATTCTCTTCCCGTATAGCTTaGAAATGGTCTCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ESLQSSGSGHTSPFQPAFSSRIA*KWSLWG
Trigger: TCCCCACAGAGACCATTTCCAAGCTATACGGGAAGA...GAATGCAGGCTGGAAAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp AGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGCAACCTCCATCTCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: REAQCWQSLPVLRQYKTAATSIS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGAGATGGAGGTTGC...TGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp GGCCCAGCCTGGCCCCCTGGTAGCTCACATACTGACCAAGCCCACAGGAGACAATCATGTTGCTCAGGCTaGTATTTAACTCCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: GPAWPPGSSHTDQAHRRQSCCSG*YLTPEF
Trigger: GAACTCAGGAGTTAAATACCAGCCTGAGCAACATGA...TTGTCTCCTGTGGGCTTGGTCAGTATGTGAGCTACCAGGGGGCCAGGCTGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp TCCTCTCTGCCAAACCAGGGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACCCTCTGGCATGGATATaGTCTTCCAAACGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SSLPNQGPLSYFKSPRAHPLAWI*SSKRPG
Trigger: ACCAGGACGTTTGGAAGATCATATCCATGCCAGAGG...GTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCCCTGGTTTGGCAGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp TCAGGAAGAAGACTGAGAGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTCCTCTGGCATGGATATaGTCTTCCAAACGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SGRRLRASRVLAPDTPHLPLAWI*SSKRPG
Trigger: ACCAGGACGTTTGGAAGATCATATCCATGCCAGAGG...AAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTCTCAGTCTTCTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR TCA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGGCCTCACGAATGTCTTaGGCAGCCCGTGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWASRMS*AARAPS
Trigger: AGAAGGTGCACGGGCTGCTCAAGACATTCGTGAGGC...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp TCATGTCCACCAGAGTCACCTGCAAGGCTTGTTCAGACACAGATAGCTGGATCCGGCAGGAGAATCACTTaGACCTGGGAGGCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: SCPPESPARLVQTQIAGSGRRIT*TWEAKV
Trigger: AACCTTCGCCTCCCAGGTTCAAGTGATTCTCCTGCC...GGATCCAGCTATCTGTGTCTGAACAAGCCTTGCAGGTGACTCTGGTGGACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp AGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATGTAAGCAGGCTGGCAGGAGTATCGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RLPSPKLPKGVEMSCKQAGRSIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCGATACTCCTGCC...AGCCTGCTTACATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp GCAAGGAGTCAAGTGACCAATAGCGGCTTGCTTCCCCTTGAACCAACTTGCTGCCGGCTTGCTTCCCCTTaGACCAACTTGCTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: ARSQVTNSGLLPLEPTCCRLASP*TNLLLK
Trigger: CTTTAGCAGCAAGTTGGTTCAAGGGGAAGCAAGCCG...GCAGCAAGTTGGTTCAAGGGGAAGCAAGCCGCTATTGGTCACTTGACTCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR TCA 90 bp GCAAGGAGTCAAGTGACCAATAGCGGCTTGCTTCCCCTTGAACCAACTTGCTGCTGGCAAGGAGTCAAGTaGCCAATAGCGGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ARSQVTNSGLLPLEPTCCWQGVK*PIAACF
Trigger: GAAGCAAGCCGCTATTGGTCACTTGACTCCTTGCCA...GCAGCAAGTTGGTTCAAGGGGAAGCAAGCCGCTATTGGTCACTTGACTCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR TCA 90 bp TCAGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGGATGTAATGAGGAAATaGGGTTCTCAGACACCCCAC +
Preference number: 4 (lower is better)
Translates to: SGKPNAGRAFLSSGNTRLDVMRK*GSQTPH
Trigger: GTGGGGTGTCTGAGAACCTCATTTCCTCATTACATC...CAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp AGGAGACAAATTGGTGCCTCTGGTCAACCCTTCCCCCTCCTCTCACTTCCTACCTTGCCATTTGGCTGCTaGACACATATGGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: RRQIGASGQPFPLLSLPTLPFGC*THMADQ
Trigger: CTGGTCAGCCATATGTGTTCAGCAGCCAAATGGCAA...GGTAGGAAGTGAGAGGAGGGGGAAGGGTTGACCAGAGGCACCAATTTGTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp TTTTTCATGCCCTCCCCAAGCACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCAGGGAGAGTAGCCCCTaGCTGCTAGCACTACTGCTT +
Preference number: 4 (lower is better)
Translates to: FFMPSPSTASGTSDVPEFRESSP*LLALLL
Trigger: AAGCAGTAGTGCTAGCAGTCAGGGGCTACTCTCCCT...GAACTCTGGGACATCACTTGTCCCTGAAGCAGTGCTTGGGGAGGGCATGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp TCCTCTCTGCCAAACCAGGGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACAAATCAGCTGTTTCATaGGCACGAAGGCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSLPNQGPLSYFKSPRAHKSAVS*ARRQAG
Trigger: TCCTGCCTGCCTTCGTGCGCATGAAACAGCTGATTT...GTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCCCTGGTTTGGCAGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp AGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAAATTCAGAAGCCTCCTaGTATAATGCCTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: REAQCWQSLPVLRQYKTANSEAS*YNASLL
Trigger: CAGCAGCGAGGCATTATAGCAGGAGGCTTCTGAATT...TGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp CCCCAAGCACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCTCCTCCCTGCAGATCTGGGGGTGAATTTTaGCATTTGGCTGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: PQALLQGQVMSQSSPPCRSGGEF*HLAAEH
Trigger: GTGTTCAGCAGCCAAATGGCAAAATTCACCCCCAGA...TCTGCAGGGAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCAGTGCTTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp AAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGCCTCCAGCGTCCTGGTCAGACATaGCTCCTGGCACGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: KWSLWGTLKFRKKTESLQRPGQT*LLARWH
Trigger: ATGCCAGCGTGCCAGGAGCCATGTCTGACCAGGACG...CTGGAGGCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp ACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCTCCTCCCTGCAGATGCGAGCCCCTCACAAGAGCCTCTaGCATGGATATGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: TASGTSDVPEFSSLQMRAPHKSL*HGYDLP
Trigger: TGGAAGATCATATCCATGCCAGAGGCTCTTGTGAGG...GGCTCGCATCTGCAGGGAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp GAGAGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTTCCAGCCTGCATTCTGGAAATGGTCTCTGTaGGGAACCCTAAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: ESLQSSGSGHTSPFQPAFWKWSL*GTLKFR
Trigger: CCTGAATTTTAGGGTTCCCCACAGAGACCATTTCCA...GAATGCAGGCTGGAAAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp TTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATAGCGCAGCCTCTATCTCCTaGGCTCAAGCGATCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FQPAFKPQGMARSQVTNSAASIS*AQAILL
Trigger: CAGAAGGATCGCTTGAGCCCAGGAGATAGAGGCTGC...GCTATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp TCAGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGAGAAGTGCCAAGAATTaGGCACAGAAGCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: SGKPNAGRAFLSSGNTRLRSAKN*AQKPTF
Trigger: AAAGGTGGGCTTCTGTGCCCAATTCTTGGCACTTCT...CAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
3UTR CAA 72 bp GAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTTaGGCAGGAAGGGTGTGTGCTCACTATAGTCAAACG +
Preference number: 4 (lower is better)
Translates to: EPSCPPAIQDCS*AGRVCAHYSQT
Trigger: CGTTTGACTATAGTGAGCACACACCCTTCCTGCCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CAA 72 bp ACCACCATGACTTCATGCACAAAGGCGCCTGGCATGTaGAAGTTGAGTGTCACTGTGCTACACACACCCCCA +
Preference number: 4 (lower is better)
Translates to: TTMTSCTKAPGM*KLSVTVLHTPP
Trigger: TGGGGGTGTGTGTAGCACAGTGACACTCAACTTCAACATGCCAGGCGCCTTTGTGCATGAAGTCATGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR TCA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCAGAGCCTACCACCATaGCTTCATGCACAAAGGCGC +
Preference number: 4 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWQSLPP*LHAQRR
Trigger: GCGCCTTTGTGCATGAAGTCATGGTGGTAGGCTCTG...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp TTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATAGCTGCTTCAGGGACAAGTaGTGTCCCAGAGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: FQPAFKPQGMARSQVTNSCFRDK*CPRVLL
Trigger: GAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCA...GCTATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp AAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGCCTCCAGCTGGGAGCCACCATCTaGCCTCCCAAGCATTTGGTG +
Preference number: 4 (lower is better)
Translates to: KWSLWGTLKFRKKTESLQLGATI*PPKHLV
Trigger: CACCAAATGCTTGGGAGGTCAGATGGTGGCTCCCAG...CTGGAGGCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR TCA 90 bp TTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATAGCTGGCAAGGAGTCAAGTaGCCAATAGCGGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: FQPAFKPQGMARSQVTNSWQGVK*PIAACF
Trigger: GAAGCAAGCCGCTATTGGTCACTTGACTCCTTGCCA...GCTATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR GCA 90 bp TTCTTCCCGTATAGCTTGGAAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAATCGCCCACTCCGCGCTaGACTGGAAACCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: FFPYSLEMVSVGNPKIQESPTPR*TGNHGS
Trigger: GGACCCATGGTTTCCAGTGCAGCGCGGAGTGGGCGA...TTCCTGAATTTTAGGGTTCCCCACAGAGACCATTTCCAAGCTATACGGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR GCA 90 bp TCCTCTCTGCCAAACCAGGGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACATCCACCGATGTTGCTaGCTTCTCGCAAACCACATT +
Preference number: 4 (lower is better)
Translates to: SSLPNQGPLSYFKSPRAHIHRCC*LLANHI
Trigger: AATGTGGTTTGCGAGAAGGCAGCAACATCGGTGGAT...GTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCCCTGGTTTGGCAGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp ACTGTTCCTGAGATGCCCCAGCCCAAGAACGAAACAAAACTTCTCATCATTTCTCAGTCCTGCGCCCACTaGCAGCGAGTCCCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: TVPEMPQPKNETKLLIISQSCAH*QRVPQE
Trigger: CTCTTGAGGGACTCGCTGGCAGTGGGCGCAGGACTG...AGAAATGATGAGAAGTTTTGTTTCGTTCTTGGGCTGGGGCATCTCAGGAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACTTAATAAAGCAAGCCCCAGTCGCATCCACCACGCTCTaGATGTACAGCCCATCCTCG +
Preference number: 4 (lower is better)
Translates to: PLSYFKSPRAHLIKQAPVASTTL*MYSPSS
Trigger: CGAGGATGGGCTGTACATGCAGAGCGTGGTGGATGC...GACTGGGGCTTGCTTTATTAAGTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGGGGAGAGACATGATCTaGCCCTGCTGTGGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRGRDMI*PCCGLP
Trigger: CGGCAGGCCACAGCAGGGGCAGATCATGTCTCTCCC...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp TCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATCCGGCAATACAAGACTaGAGTTTGGCAGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SGARGYQAQNFPREWRCHPAIQD*SLAGRV
Trigger: CACCCTTCCTGCCAAACTGCAGTCTTGTATTGCCGG...ATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp CCTTTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATGCTATAATGCCTCGCTaGTGGCGACAGAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: PFQPAFKPQGMARSQVTNAIMPR*WRQSGY
Trigger: GTATCCACTCTGTCGCCAGCAGCGAGGCATTATAGC...ATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp ATGCCCAGTCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAAATTCAGAAGCCTCCTaGTATAATGCCTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MPSQGQEVTKPKTSQGSGNSEAS*YNASLL
Trigger: CAGCAGCGAGGCATTATAGCAGGAGGCTTCTGAATT...TCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGACTGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp AGAGGAGGTGGGTTTAGAGGAAAAAGGACTTTTATGACTGCTAGGAGTTTGGTGCTGCACTGGAAACCATaGGTCCGACGGGGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: RGGGFRGKRTFMTARSLVLHWKP*VRRGLG
Trigger: CCCGAGACCCCGTCGGACCCATGGTTTCCAGTGCAG...CACCAAACTCCTAGCAGTCATAAAAGTCCTTTTTCCTCTAAACCCACCTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp AATGAGGAAATGAGGTTCTCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAAATCTTCCAAACGTCCTaGTCAGACATGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NEEMRFSDTPPESCCSGQIFQTS*SDMAPG
Trigger: GCCAGGAGCCATGTCTGACCAGGACGTTTGGAAGAT...TTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGAGAACCTCATTTCCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp TCCTCTCTGCCAAACCAGGGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACATGCACAAAGGCGCCTaGCATGTTGAAGTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SSLPNQGPLSYFKSPRAHMHKGA*HVEVEC
Trigger: ACACTCAACTTCAACATGCCAGGCGCCTTTGTGCAT...GTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCCCTGGTTTGGCAGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TTCTTCCCGTATAGCTTGGAAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAACGGGAACGCGCCGCCTaGTTTCTAAGGAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: FFPYSLEMVSVGNPKIQERERAA*FLRNWG
Trigger: CCCCCAGTTCCTTAGAAACCAGGCGGCGCGTTCCCG...TTCCTGAATTTTAGGGTTCCCCACAGAGACCATTTCCAAGCTATACGGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602855.2
CDS-3UTR CCA 90 bp AGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCATGTGTGCCCCAGAAATaGGAGAACAAACACACTAGT +
Preference number: 4 (lower is better)
Translates to: REAQCWQSLPVLRQYKTACVPQK*ENKHTS
Trigger: ACTAGTGTGTTTGTTCTCCCATTTCTGGGGCACACA...TGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp AGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTTCCAGCCTGCATTCAAGTTTCTGAATTCAATCTaGGAGCCACCATCTGACCTC +
Preference number: 4 (lower is better)
Translates to: SLQSSGSGHTSPFQPAFKFLNSI*EPPSDL
Trigger: GAGGTCAGATGGTGGCTCCCAGATTGAATTCAGAAA...CTTGAATGCAGGCTGGAAAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp AGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTTCCAGCCTGCATTCAAGTGGAAATGGTCTCTGTaGGGAACCCTAAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: SLQSSGSGHTSPFQPAFKWKWSL*GTLKFR
Trigger: CCTGAATTTTAGGGTTCCCCACAGAGACCATTTCCA...CTTGAATGCAGGCTGGAAAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp TCAGGAAGAAGACTGAGAGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTCGTATAGCTTGGAAATaGTCTCTGTGGGGAACCCTA +
Preference number: 4 (lower is better)
Translates to: SGRRLRASRVLAPDTPHLRIAWK*SLWGTL
Trigger: TAGGGTTCCCCACAGAGACCATTTCCAAGCTATACG...AAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTCTCAGTCTTCTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp AGGATTACAAACCTCAGTGCTGCAGCAAGGAACAAGGCATGTGGATTGGTAGTCGCAACCTCCGCTTCCTaGGCTCAAGCTAACCTCCCA +
Preference number: 4 (lower is better)
Translates to: RITNLSAAARNKACGLVVATSAS*AQANLP
Trigger: TGGGAGGTTAGCTTGAGCCCAGGAAGCGGAGGTTGC...GACTACCAATCCACATGCCTTGTTCCTTGCTGCAGCACTGAGGTTTGTAATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp AGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATGTAAGCAGGCTCTGCTGGCGACAGAGTaGATACTGCAGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RLPSPKLPKGVEMSCKQALLATE*ILQCEA
Trigger: TGCCTCACACTGCAGTATCCACTCTGTCGCCAGCAG...AGCCTGCTTACATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp TTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATAGCATAATGCCTCGCTGCTaGCGACAGAGTGGATACTGC +
Preference number: 4 (lower is better)
Translates to: FQPAFKPQGMARSQVTNSIMPRC*RQSGYC
Trigger: GCAGTATCCACTCTGTCGCCAGCAGCGAGGCATTAT...GCTATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp TCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATCCTCTGGCATGGATATaGTCTTCCAAACGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SGARGYQAQNFPREWRCHPLAWI*SSKRPG
Trigger: ACCAGGACGTTTGGAAGATCATATCCATGCCAGAGG...ATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp TCAGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGAGGCAAACTTTATGTTaGCTGAGATGCAACCATCTC +
Preference number: 4 (lower is better)
Translates to: SGKPNAGRAFLSSGNTRLRQTLC*LRCNHL
Trigger: GAGATGGTTGCATCTCAGTCAACATAAAGTTTGCCT...CAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp AGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAAGGCAAACTTTATGTTaGCTGAGATGCAACCATCTC +
Preference number: 4 (lower is better)
Translates to: REAQCWQSLPVLRQYKTARQTLC*LRCNHL
Trigger: GAGATGGTTGCATCTCAGTCAACATAAAGTTTGCCT...TGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp TCAGGGAAGCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGGAAGTTGACTCCAGTTaGCTGGAAATAGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: SGKPNAGRAFLSSGNTRLEVDSS*LEIEDQ
Trigger: TTGGTCTTCTATTTCCAGTCAACTGGAGTCAACTTC...CAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp TCAGGAAGAAGACTGAGAGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTTTGGACTATAAAATCTaGAGACAGGGAGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: SGRRLRASRVLAPDTPHLLDYKI*RQGGVQ
Trigger: TTGGACCCCTCCCTGTCTTCAGATTTTATAGTCCAA...AAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTCTCAGTCTTCTTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp GAGAGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTTCCAGCCTGCATTCGCATTTGGTGACCAATaGATGAATAACTCCAATGTC +
Preference number: 4 (lower is better)
Translates to: ESLQSSGSGHTSPFQPAFAFGDQ*MNNSNV
Trigger: GACATTGGAGTTATTCATTCATTGGTCACCAAATGC...GAATGCAGGCTGGAAAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR TCA 90 bp TCCTCTTTCTTCCCGTATAGCTTGGAAATGGTCTCTGTGGGGAACCCTAAAATTCTGGTCTCAAACTCCTaGCCTTGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SSFFPYSLEMVSVGNPKILVSNS*PCDPPA
Trigger: GGCGGGCGGATCACAAGGTCAGGAGTTTGAGACCAG...AATTTTAGGGTTCCCCACAGAGACCATTTCCAAGCTATACGGGAAGAAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp TGCAACCATCTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCCGTCCTGGTCAGACATaGCTCCTGGCACGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: CNHLQPLDGCLLEYFLNFRPGQT*LLARWH
Trigger: ATGCCAGCGTGCCAGGAGCCATGTCTGACCAGGACG...GAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAGATGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp AATGAGGAAATGAGGTTCTCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAATACAAGACTGCAGTTTaGCAGGAAGGGTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NEEMRFSDTPPESCCSGQYKTAV*QEGCVL
Trigger: GAGCACACACCCTTCCTGCCAAACTGCAGTCTTGTA...TTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGAGAACCTCATTTCCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp GCAAGGAGTCAAGTGACCAATAGCGGCTTGCTTCCCCTTGAACCAACTTGCTGCAACTTCCCAAGGGAGTaGAGATGTCATGTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: ARSQVTNSGLLPLEPTCCNFPRE*RCHVSR
Trigger: CCTGCTTACATGACATCTCCACTCCCTTGGGAAGTT...GCAGCAAGTTGGTTCAAGGGGAAGCAAGCCGCTATTGGTCACTTGACTCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp AAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGCCTCCAGTTGCCACCATGGCAGTaGTCAGGAAGAGTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: KWSLWGTLKFRKKTESLQLPPWQ*SGRVED
Trigger: GTCCTCCACTCTTCCTGACCACTGCCATGGTGGCAA...CTGGAGGCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp TCCTCTTTCTTCCCGTATAGCTTGGAAATGGTCTCTGTGGGGAACCCTAAAATTGAGCCTCCAGAGTTCTaGCTCCGGACACACCTCACC +
Preference number: 4 (lower is better)
Translates to: SSFFPYSLEMVSVGNPKIEPPEF*LRTHLT
Trigger: GGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTC...AATTTTAGGGTTCCCCACAGAGACCATTTCCAAGCTATACGGGAAGAAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp GGCCCAGCCTGGCCCCCTGGTAGCTCACATACTGACCAAGCCCACAGGAGACAATTAATTCAAAATGATTaGATCAGTGGCTCTCAATCC +
Preference number: 4 (lower is better)
Translates to: GPAWPPGSSHTDQAHRRQLIQND*ISGSQS
Trigger: GGATTGAGAGCCACTGATCCAATCATTTTGAATTAA...TTGTCTCCTGTGGGCTTGGTCAGTATGTGAGCTACCAGGGGGCCAGGCTGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp CCTTTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATGCTTCTCCACACTTGTaGGCCTTCCAGATTAGGGAA +
Preference number: 4 (lower is better)
Translates to: PFQPAFKPQGMARSQVTNASPHL*AFQIRE
Trigger: TTCCCTAATCTGGAAGGCCCACAAGTGTGGAGAAGC...ATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp ACTGTTCCTGAGATGCCCCAGCCCAAGAACGAAACAAAACTTCTCATCATTTCTATCGGCTCGACCTCTTaGTGGCATCCACCACGCTCT +
Preference number: 4 (lower is better)
Translates to: TVPEMPQPKNETKLLIISIGSTS*WHPPRS
Trigger: AGAGCGTGGTGGATGCCATCAAGAGGTCGAGCCGAT...AGAAATGATGAGAAGTTTTGTTTCGTTCTTGGGCTGGGGCATCTCAGGAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR TCA 90 bp GCCCAATGCTGGCAGAGCCTTCCTGTCCTCCGGCAATACAAGACTGCAGTTTGGACTATAGTCAAACGCTaGCAAAACATGGGAAATGGT +
Preference number: 4 (lower is better)
Translates to: AQCWQSLPVLRQYKTAVWTIVKR*QNMGNG
Trigger: ACCATTTCCCATGTTTTGTCAGCGTTTGACTATAGT...CCAAACTGCAGTCTTGTATTGCCGGAGGACAGGAAGGCTCTGCCAGCATTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp TCCTCTTTCTTCCCGTATAGCTTGGAAATGGTCTCTGTGGGGAACCCTAAAATTCTGGGAGCCACCATCTaGCCTCCCAAGCATTTGGTG +
Preference number: 4 (lower is better)
Translates to: SSFFPYSLEMVSVGNPKILGATI*PPKHLV
Trigger: CACCAAATGCTTGGGAGGTCAGATGGTGGCTCCCAG...AATTTTAGGGTTCCCCACAGAGACCATTTCCAAGCTATACGGGAAGAAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGAAATCAGCTGTTTCATaGGCACGAAGGCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWKSAVS*ARRQAG
Trigger: TCCTGCCTGCCTTCGTGCGCATGAAACAGCTGATTT...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp ACTGTTCCTGAGATGCCCCAGCCCAAGAACGAAACAAAACTTCTCATCATTTCTTCATCGCTAGTGACGTaGCGGATGCCACGGATGGCA +
Preference number: 4 (lower is better)
Translates to: TVPEMPQPKNETKLLIISSSLVT*RMPRMA
Trigger: TGCCATCCGTGGCATCCGGCACGTCACTAGCGATGA...AGAAATGATGAGAAGTTTTGTTTCGTTCTTGGGCTGGGGCATCTCAGGAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGGTTGTTCCGCTGAAGTaGCTCACACAGGTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWVVPLK*LTQVLV
Trigger: AACCAGAACCTGTGTGAGGCACTTCAGCGGAACAAC...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGGAACATTTGCCACCCTaGAAGTCTGAGGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWEHLPP*KSEEQM
Trigger: CATCTGCTCCTCAGACTTGCAGGGTGGCAAATGTTC...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp CCCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGAACATTTGCCACCCTaGAAGTCTGAGGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: PKNETKLLIISPQASAELEHLPP*KSEEQM
Trigger: CATCTGCTCCTCAGACTTGCAGGGTGGCAAATGTTC...CAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR GCA 90 bp AGGGTCTCCAGTGCTTCTCCACACTTGTGGGCCTTCCAGATTAGGGAAGACAATTCTGGGGGTGAATTTTaGCATTTGGCTGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: RVSSASPHLWAFQIREDNSGGEF*HLAAEH
Trigger: GTGTTCAGCAGCCAAATGGCAAAATTCACCCCCAGA...ATTGTCTTCCCTAATCTGGAAGGCCCACAAGTGTGGAGAAGCACTGGAGACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp AATGAGGAAATGAGGTTCTCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAAGATTACAAACCTCAGTaGTGCAGCAAGGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: NEEMRFSDTPPESCCSGQDYKPQ*CSKEQG
Trigger: GCCTTGTTCCTTGCTGCAGCACTGAGGTTTGTAATC...TTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGAGAACCTCATTTCCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp AAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGCCTCCAGATCTTCCAAACGTCCTaGTCAGACATGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KWSLWGTLKFRKKTESLQIFQTS*SDMAPG
Trigger: GCCAGGAGCCATGTCTGACCAGGACGTTTGGAAGAT...CTGGAGGCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp TTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATAGCCCTCACAAGAGCCTCTaGCATGGATATGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: FQPAFKPQGMARSQVTNSPHKSL*HGYDLP
Trigger: TGGAAGATCATATCCATGCCAGAGGCTCTTGTGAGG...GCTATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp CCCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGCACACCGTGGTAACCTaGCAACAGGAACATTTGCCA +
Preference number: 4 (lower is better)
Translates to: PKNETKLLIISPQASAELHTVVT*QQEHLP
Trigger: TGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTG...CAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp TCCTCTTTCTTCCCGTATAGCTTGGAAATGGTCTCTGTGGGGAACCCTAAAATTAGGGAAGCCCAATGCTaGCAGAGCCTTCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SSFFPYSLEMVSVGNPKIREAQC*QSLPVL
Trigger: GAGGACAGGAAGGCTCTGCCAGCATTGGGCTTCCCT...AATTTTAGGGTTCCCCACAGAGACCATTTCCAAGCTATACGGGAAGAAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp CTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCTGTTCAGGGTGGAGGACAACCTCATaGCACCGGTTCCTCGACCTA +
Preference number: 4 (lower is better)
Translates to: LQPLDGCLLEYFLNFCSGWRTTS*HRFLDL
Trigger: TAGGTCGAGGAACCGGTGCCATGAGGTTGTCCTCCA...CCCTGAACAGAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp AGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGAAAGAGGGAAAGACCCTGCTGGCGACAGAGTaGATACTGCAGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RIRNSCFMPQEVRKEGKTLLATE*ILQCEA
Trigger: TGCCTCACACTGCAGTATCCACTCTGTCGCCAGCAG...GGTCTTTCCCTCTTTCCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CAA 72 bp GAAGACAATCACAGTTCTGGGGGTGAATTTTGCCATTaGGCTGCTGAACACATATGGCTGACCAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EDNHSSGGEFCH*AAEHIWLTREG
Trigger: TCCCTCCCTGGTCAGCCATATGTGTTCAGCAGCCAAATGGCAAAATTCACCCCCAGAACTGTGATTGTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp CCTTCCAGATTAGGGAAGACAATCACAGTTCTGGGGGTGAATTTTGCCATTTGGCCATCTCCAGCCCCTTaGTGGCTGTCTCTTAGAGTA +
Preference number: 4 (lower is better)
Translates to: PSRLGKTITVLGVNFAIWPSPAP*WLSLRV
Trigger: TACTCTAAGAGACAGCCATCAAGGGGCTGGAGATGG...CCAAATGGCAAAATTCACCCCCAGAACTGTGATTGTCTTCCCTAATCTGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp TCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATGACAACCGGACAGACTaGAGTTCTTTCTCACTTCAA +
Preference number: 4 (lower is better)
Translates to: SGARGYQAQNFPREWRCHDNRTD*SSFSLQ
Trigger: TTGAAGTGAGAAAGAACTTCAGTCTGTCCGGTTGTC...ATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp ATGCCCAGTCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGCATTTGGTGACCAATaGATGAATAACTCCAATGTC +
Preference number: 4 (lower is better)
Translates to: MPSQGQEVTKPKTSQGSGAFGDQ*MNNSNV
Trigger: GACATTGGAGTTATTCATTCATTGGTCACCAAATGC...TCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGACTGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp AGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTTCCAGCCTGCATTCAAGTTGCTGCTAAAGTGTTaGCTTAGGTCTATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SLQSSGSGHTSPFQPAFKLLLKC*LRSISE
Trigger: TTCAGAAATAGACCTAAGTCAACACTTTAGCAGCAA...CTTGAATGCAGGCTGGAAAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR TCA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGAGGGAGAGTAGCCCCTaGCTGCTAGCACTACTGCTT +
Preference number: 4 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRRESSP*LLALLL
Trigger: AAGCAGTAGTGCTAGCAGTCAGGGGCTACTCTCCCT...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp AGGAGAGAAAAATCACAGCACGAAGACTTGGTGAAATGTAACCAAGATGTCATTGGGAGAGACATGATCTaGCCCTGCTGTGGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: RREKSQHEDLVKCNQDVIGRDMI*PCCGLP
Trigger: CGGCAGGCCACAGCAGGGGCAGATCATGTCTCTCCC...AATGACATCTTGGTTACATTTCACCAAGTCTTCGTGCTGTGATTTTTCTCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp TTTAGATGGGGACTCGCTTTGTTACCCAGTGGTATAATCTTGGCTCATTGCAACCTCTCCTTCCTGTGGTaGTGTGTGCCCCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: FRWGLALLPSGIILAHCNLSFLW*CVPQKW
Trigger: CCATTTCTGGGGCACACAGCACCACAGGAAGGAGAG...GTTGCAATGAGCCAAGATTATACCACTGGGTAACAAAGCGAGTCCCCATCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCACTGCACTGGAAACCATaGGTCCGACGGGGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPLHWKP*VRRGLG
Trigger: CCCGAGACCCCGTCGGACCCATGGTTTCCAGTGCAG...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCCTCACAAGAGCCTCTaGCATGGATATGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWPHKSL*HGYDLP
Trigger: TGGAAGATCATATCCATGCCAGAGGCTCTTGTGAGG...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CCA 90 bp CATCTTGACTTAAACAGGCTCCTGAGGGCTAGCTGTACAGAGTCTTTGGGTAGCCATCAGGACAGTGACTaGCACACAGGAGGCATTAAA +
Preference number: 4 (lower is better)
Translates to: HLDLNRLLRASCTESLGSHQDSD*HTGGIK
Trigger: TTTAATGCCTCCTGTGTGCCAGTCACTGTCCTGATG...GCTACCCAAAGACTCTGTACAGCTAGCCCTCAGGAGCCTGTTTAAGTCAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp GCAAGGAGTCAAGTGACCAATAGCGGCTTGCTTCCCCTTGAACCAACTTGCTGCCATCAAGGAGACACTTaGCTCCTATTACCTCACATA +
Preference number: 4 (lower is better)
Translates to: ARSQVTNSGLLPLEPTCCHQGDT*LLLPHI
Trigger: TATGTGAGGTAATAGGAGCCAAGTGTCTCCTTGATG...GCAGCAAGTTGGTTCAAGGGGAAGCAAGCCGCTATTGGTCACTTGACTCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp CATCTTGACTTAAACAGGCTCCTGAGGGCTAGCTGTACAGAGTCTTTGGGTAGCCGTATAGCTTGGAAATaGTCTCTGTGGGGAACCCTA +
Preference number: 4 (lower is better)
Translates to: HLDLNRLLRASCTESLGSRIAWK*SLWGTL
Trigger: TAGGGTTCCCCACAGAGACCATTTCCAAGCTATACG...GCTACCCAAAGACTCTGTACAGCTAGCCCTCAGGAGCCTGTTTAAGTCAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp ACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCTCCTCCCTGCAGATGCGAGCCTGTCATTTGTACTTATaGGCATCTTACGTAGGTCTA +
Preference number: 4 (lower is better)
Translates to: TASGTSDVPEFSSLQMRACHLYL*ASYVGL
Trigger: TAGACCTACGTAAGATGCCCATAAGTACAAATGACA...GGCTCGCATCTGCAGGGAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp TGCAACCATCTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCTGCTTCAGGGACAAGTaGTGTCCCAGAGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: CNHLQPLDGCLLEYFLNFCFRDK*CPRVLL
Trigger: GAGGAGAACTCTGGGACATCACTTGTCCCTGAAGCA...GAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAGATGGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp AGAGGAGGTGGGTTTAGAGGAAAAAGGACTTTTATGACTGCTAGGAGTTTGGTGCCATCTCCAGCCCCTTaGTGGCTGTCTCTTAGAGTA +
Preference number: 4 (lower is better)
Translates to: RGGGFRGKRTFMTARSLVPSPAP*WLSLRV
Trigger: TACTCTAAGAGACAGCCATCAAGGGGCTGGAGATGG...CACCAAACTCCTAGCAGTCATAAAAGTCCTTTTTCCTCTAAACCCACCTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp AGAGGAGGTGGGTTTAGAGGAAAAAGGACTTTTATGACTGCTAGGAGTTTGGTGATGACATCAGGACAGTaGCTGGCACACAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RGGGFRGKRTFMTARSLVMTSGQ*LAHRRH
Trigger: ATGCCTCCTGTGTGCCAGTCACTGTCCTGATGTCAT...CACCAAACTCCTAGCAGTCATAAAAGTCCTTTTTCCTCTAAACCCACCTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp TCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATAGCACGAAGACTTGGTaGAATGTAACCAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: SGARGYQAQNFPREWRCHSTKTW*NVTKMS
Trigger: TGACATCTTGGTTACATTTCACCAAGTCTTCGTGCT...ATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGCTGAGATTGCACCAATaGACACTCCAGCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRLRLHQ*TLQPGQ
Trigger: TTGCCCAGGCTGGAGTGTGCATTGGTGCAATCTCAG...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp TGCAACCATCTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCGCTATAATGCCTCGCTaGTGGCGACAGAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: CNHLQPLDGCLLEYFLNFAIMPR*WRQSGY
Trigger: GTATCCACTCTGTCGCCAGCAGCGAGGCATTATAGC...GAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAGATGGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp TTTAGATGGGGACTCGCTTTGTTACCCAGTGGTATAATCTTGGCTCATTGCAACACCCCACCTGAGAGCTaGTGTTCTGGCCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: FRWGLALLPSGIILAHCNTPPES*CSGQFR
Trigger: TCTGAATTGGCCAGAACAGCAGCTCTCAGGTGGGGT...GTTGCAATGAGCCAAGATTATACCACTGGGTAACAAAGCGAGTCCCCATCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp AGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATGTAAGCAGGCTGCTGTACAGAGTCTTTaGGTAGCCATGAAAGACATG +
Preference number: 4 (lower is better)
Translates to: RLPSPKLPKGVEMSCKQAAVQSL*VAMKDM
Trigger: CATGTCTTTCATGGCTACCCAAAGACTCTGTACAGC...AGCCTGCTTACATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp AGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATGTAAGCAGGCTTTTGAATGTCCAAAATaGCATCAGGACAGTGACTGG +
Preference number: 4 (lower is better)
Translates to: RLPSPKLPKGVEMSCKQAFECPK*HQDSDW
Trigger: CCAGTCACTGTCCTGATGTCATTTTGGACATTCAAA...AGCCTGCTTACATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp CCTTTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATTTGGTGACCAATGAATaGATAACTCCAATGTCACAC +
Preference number: 4 (lower is better)
Translates to: PFQPAFKPQGMARSQVTNLVTNE*ITPMSH
Trigger: GTGTGACATTGGAGTTATTCATTCATTGGTCACCAA...ATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR TCA 90 bp AAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGCCTCCAGAGTTCGAAACCAGCTTaGACAACACAGCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: KWSLWGTLKFRKKTESLQSSKPA*TTQQDP
Trigger: AGGATCTTGCTGTGTTGTTCAAGCTGGTTTCGAACT...CTGGAGGCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGTTGCCATTTGGCTGCTaGACACATATGGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRLPFGC*THMADQ
Trigger: CTGGTCAGCCATATGTGTTCAGCAGCCAAATGGCAA...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp TGCAACCATCTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCTCACAGTTCTGGGGGTaGATTTTGCCATTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CNHLQPLDGCLLEYFLNFSQFWG*ILPFGC
Trigger: GCAGCCAAATGGCAAAATTCACCCCCAGAACTGTGA...GAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAGATGGTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp AGAGGAGGTGGGTTTAGAGGAAAAAGGACTTTTATGACTGCTAGGAGTTTGGTGTCACAGTTCTGGGGGTaGATTTTGCCATTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RGGGFRGKRTFMTARSLVSQFWG*ILPFGC
Trigger: GCAGCCAAATGGCAAAATTCACCCCCAGAACTGTGA...CACCAAACTCCTAGCAGTCATAAAAGTCCTTTTTCCTCTAAACCCACCTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp AGGATTACAAACCTCAGTGCTGCAGCAAGGAACAAGGCATGTGGATTGGTAGTCCCACCAAGCCTGGCCTaGAAACTTAGTGTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: RITNLSAAARNKACGLVVPPSLA*KLSVFL
Trigger: TAGAAAAACACTAAGTTTGCAGGCCAGGCTTGGTGG...GACTACCAATCCACATGCCTTGTTCCTTGCTGCAGCACTGAGGTTTGTAATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp TTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATAGCGGGATTTCATCATGTTaGTCAGGCTGGTATTTAACT +
Preference number: 4 (lower is better)
Translates to: FQPAFKPQGMARSQVTNSGISSC*SGWYLT
Trigger: AGTTAAATACCAGCCTGAGCAACATGATGAAATCCC...GCTATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCACTGGAGGGTCTCCAGTaGTTCTCCACACTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPLEGLQ*FSTLVG
Trigger: GCCCACAAGTGTGGAGAAGCACTGGAGACCCTCCAG...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp AGGGTCTCCAGTGCTTCTCCACACTTGTGGGCCTTCCAGATTAGGGAAGACAATACATATGTATACATGTaGCGTGTTGGTGTGAATCTC +
Preference number: 4 (lower is better)
Translates to: RVSSASPHLWAFQIREDNTYVYM*RVGVNL
Trigger: GAGATTCACACCAACACGGCACATGTATACATATGT...ATTGTCTTCCCTAATCTGGAAGGCCCACAAGTGTGGAGAAGCACTGGAGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp AGGAGACAAATTGGTGCCTCTGGTCAACCCTTCCCCCTCCTCTCACTTCCTACCTCTAGTTGCCTCAATTaGACTATAAAATCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: RRQIGASGQPFPLLSLPTSSCLN*TIKSED
Trigger: GTCTTCAGATTTTATAGTCCAATTGAGGCAACTAGA...GGTAGGAAGTGAGAGGAGGGGGAAGGGTTGACCAGAGGCACCAATTTGTCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp AAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGCCTCCAGTTTCTGAATTCAATCTaGGAGCCACCATCTGACCTC +
Preference number: 4 (lower is better)
Translates to: KWSLWGTLKFRKKTESLQFLNSI*EPPSDL
Trigger: GAGGTCAGATGGTGGCTCCCAGATTGAATTCAGAAA...CTGGAGGCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CCA 90 bp TTGTTTTATCATACGTACTGTTTATTAGGCCTCTCCGAGAGTCAGGCCCAGCCTTCTTCCCGTATAGCTTaGAAATGGTCTCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LFYHTYCLLGLSESQAQPSSRIA*KWSLWG
Trigger: TCCCCACAGAGACCATTTCCAAGCTATACGGGAAGA...AGGCTGGGCCTGACTCTCGGAGAGGCCTAATAAACAGTACGTATGATAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp AGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGAAAGAGGGAAAGACCATGAGCCACCAAGCCTaGCCTGCAAACTTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: RIRNSCFMPQEVRKEGKTMSHQA*PANLVF
Trigger: AAACACTAAGTTTGCAGGCCAGGCTTGGTGGCTCAT...GGTCTTTCCCTCTTTCCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGGCTTCTCCACACTTGTaGGCCTTCCAGATTAGGGAA +
Preference number: 4 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRASPHL*AFQIRE
Trigger: TTCCCTAATCTGGAAGGCCCACAAGTGTGGAGAAGC...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp CTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCTGTTCAGGGTTACTTGCTCCAAATTaGCAACCGGACAGACTGAAG +
Preference number: 4 (lower is better)
Translates to: LQPLDGCLLEYFLNFCSGLLAPN*QPDRLK
Trigger: CTTCAGTCTGTCCGGTTGTCAATTTGGAGCAAGTAA...CCCTGAACAGAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp CATCTTGACTTAAACAGGCTCCTGAGGGCTAGCTGTACAGAGTCTTTGGGTAGCGTTTGGAGTGGGGCCTaGGAATTTAGATTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: HLDLNRLLRASCTESLGSVWSGA*EFRFLF
Trigger: AAAAAGAAATCTAAATTCTCAGGCCCCACTCCAAAC...GCTACCCAAAGACTCTGTACAGCTAGCCCTCAGGAGCCTGTTTAAGTCAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp CCTTTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATCAGTTTAATTCAAAATaGTTGGATCAGTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PFQPAFKPQGMARSQVTNQFNSK*LDQWLS
Trigger: TGAGAGCCACTGATCCAATCATTTTGAATTAAACTG...ATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp AGAGGAGGTGGGTTTAGAGGAAAAAGGACTTTTATGACTGCTAGGAGTTTGGTGACTGCAAGGACATCTTaGCTTAAACAGGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RGGGFRGKRTFMTARSLVTARTS*LKQAPE
Trigger: CTCAGGAGCCTGTTTAAGTCAAGATGTCCTTGCAGT...CACCAAACTCCTAGCAGTCATAAAAGTCCTTTTTCCTCTAAACCCACCTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp AAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGCCTCCAGTGTGCCGTGTTGGTGTaGATCTCTTCAATTTATGAC +
Preference number: 4 (lower is better)
Translates to: KWSLWGTLKFRKKTESLQCAVLV*ISSIYD
Trigger: GTCATAAATTGAAGAGATTCACACCAACACGGCACA...CTGGAGGCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp TTCTTCCCGTATAGCTTGGAAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAATACAAACCTCAGTGCTaGAGCAAGGAACAAGGCATG +
Preference number: 4 (lower is better)
Translates to: FFPYSLEMVSVGNPKIQEYKPQC*SKEQGM
Trigger: CATGCCTTGTTCCTTGCTGCAGCACTGAGGTTTGTA...TTCCTGAATTTTAGGGTTCCCCACAGAGACCATTTCCAAGCTATACGGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp AGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGAAAGAGGGAAAGACCTGTGTGCCCCAGAAATaGGAGAACAAACACACTAGT +
Preference number: 4 (lower is better)
Translates to: RIRNSCFMPQEVRKEGKTCVPQK*ENKHTS
Trigger: ACTAGTGTGTTTGTTCTCCCATTTCTGGGGCACACA...GGTCTTTCCCTCTTTCCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CAA 72 bp TTAAACAGGCTCCTGAGGGCTAGCTGTACAGAGTCTTaGGGTAGCCATGAAAGACATGTCTACCTGAGTTTA +
Preference number: 4 (lower is better)
Translates to: LNRLLRASCTES*GSHERHVYLSL
Trigger: TAAACTCAGGTAGACATGTCTTTCATGGCTACCCAAAGACTCTGTACAGCTAGCCCTCAGGAGCCTGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp CCTTCCAGATTAGGGAAGACAATCACAGTTCTGGGGGTGAATTTTGCCATTTGGAAACTTTATGTTGACTaGGATGCAACCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSRLGKTITVLGVNFAIWKLYVD*DATISS
Trigger: GCTGGAGATGGTTGCATCTCAGTCAACATAAAGTTT...CCAAATGGCAAAATTCACCCCCAGAACTGTGATTGTCTTCCCTAATCTGGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp TGCAACCATCTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCAATGAGGGCAAGAAATaGTCTCGTGGCCTTAGAAGT +
Preference number: 4 (lower is better)
Translates to: CNHLQPLDGCLLEYFLNFNEGKK*SRGLRS
Trigger: ACTTCTAAGGCCACGAGATCATTTCTTGCCCTCATT...GAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAGATGGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp TTGTTTTATCATACGTACTGTTTATTAGGCCTCTCCGAGAGTCAGGCCCAGCCTAACGCTGACAAAACATaGGAAATGGTAGCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: LFYHTYCLLGLSESQAQPNADKT*EMVALL
Trigger: TAGCAAGGCTACCATTTCCCATGTTTTGTCAGCGTT...AGGCTGGGCCTGACTCTCGGAGAGGCCTAATAAACAGTACGTATGATAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp TGCAACCATCTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCTCAGTAGTATCAGTGTaGGACTGCAAGGACATCTTG +
Preference number: 4 (lower is better)
Translates to: CNHLQPLDGCLLEYFLNFSVVSV*DCKDIL
Trigger: CAAGATGTCCTTGCAGTCCCACACTGATACTACTGA...GAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAGATGGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp TGCAACCATCTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCAAACTTTATGTTGACTaGGATGCAACCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CNHLQPLDGCLLEYFLNFKLYVD*DATISS
Trigger: GCTGGAGATGGTTGCATCTCAGTCAACATAAAGTTT...GAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAGATGGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp CCTTCCAGATTAGGGAAGACAATCACAGTTCTGGGGGTGAATTTTGCCATTTGGACTATAGTCAAACGCTaGCAAAACATGGGAAATGGT +
Preference number: 4 (lower is better)
Translates to: PSRLGKTITVLGVNFAIWTIVKR*QNMGNG
Trigger: ACCATTTCCCATGTTTTGTCAGCGTTTGACTATAGT...CCAAATGGCAAAATTCACCCCCAGAACTGTGATTGTCTTCCCTAATCTGGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp CCTTCCAGATTAGGGAAGACAATCACAGTTCTGGGGGTGAATTTTGCCATTTGGTTGGTGACCAATGAATaGATAACTCCAATGTCACAC +
Preference number: 4 (lower is better)
Translates to: PSRLGKTITVLGVNFAIWLVTNE*ITPMSH
Trigger: GTGTGACATTGGAGTTATTCATTCATTGGTCACCAA...CCAAATGGCAAAATTCACCCCCAGAACTGTGATTGTCTTCCCTAATCTGGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp TTTAGATGGGGACTCGCTTTGTTACCCAGTGGTATAATCTTGGCTCATTGCAACTGTGCCGTGTTGGTGTaGATCTCTTCAATTTATGAC +
Preference number: 4 (lower is better)
Translates to: FRWGLALLPSGIILAHCNCAVLV*ISSIYD
Trigger: GTCATAAATTGAAGAGATTCACACCAACACGGCACA...GTTGCAATGAGCCAAGATTATACCACTGGGTAACAAAGCGAGTCCCCATCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp TTCTTCCCGTATAGCTTGGAAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAAAGGCCAAAACTTACTTaGTCCAAATTGACAACCGGA +
Preference number: 4 (lower is better)
Translates to: FFPYSLEMVSVGNPKIQERPKLT*SKLTTG
Trigger: TCCGGTTGTCAATTTGGAGCAAGTAAGTTTTGGCCT...TTCCTGAATTTTAGGGTTCCCCACAGAGACCATTTCCAAGCTATACGGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp AGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGAAAGAGGGAAAGACCACATATGTATACATGTaGCGTGTTGGTGTGAATCTC +
Preference number: 4 (lower is better)
Translates to: RIRNSCFMPQEVRKEGKTTYVYM*RVGVNL
Trigger: GAGATTCACACCAACACGGCACATGTATACATATGT...GGTCTTTCCCTCTTTCCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CCA 90 bp AGGAGAGAAAAATCACAGCACGAAGACTTGGTGAAATGTAACCAAGATGTCATTTACAAGACTGCAGTTTaGCAGGAAGGGTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RREKSQHEDLVKCNQDVIYKTAV*QEGCVL
Trigger: GAGCACACACCCTTCCTGCCAAACTGCAGTCTTGTA...AATGACATCTTGGTTACATTTCACCAAGTCTTCGTGCTGTGATTTTTCTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp AGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGAAAGAGGGAAAGACCATAAAGAGAAGAAGTTaGCTCCAGTTGACTGGAAAT +
Preference number: 4 (lower is better)
Translates to: RIRNSCFMPQEVRKEGKTIKRRS*LQLTGN
Trigger: ATTTCCAGTCAACTGGAGTCAACTTCTTCTCTTTAT...GGTCTTTCCCTCTTTCCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR GCA 90 bp TTTAGATGGGGACTCGCTTTGTTACCCAGTGGTATAATCTTGGCTCATTGCAACATAATCTTGGCTCATTaGAACAAGAGGGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: FRWGLALLPSGIILAHCNIILAH*NKRETL
Trigger: CAGAGTTTCCCTCTTGTTGCAATGAGCCAAGATTAT...GTTGCAATGAGCCAAGATTATACCACTGGGTAACAAAGCGAGTCCCCATCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602496.1
CDS-3UTR CCA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCACCTCACAAGAGCCTCTaGCATGGATATGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPPHKSL*HGYDLP
Trigger: TGGAAGATCATATCCATGCCAGAGGCTCTTGTGAGG...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
3UTR CAA 72 bp AACCTCAGTGCTGCAGCAAGGAACAAGGCATGTGGATaGGTAGTCTATGACATCATTCAATCTCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: NLSAAARNKACG*VVYDIIQSLQF
Trigger: AAATTGAAGAGATTGAATGATGTCATAGACTACCAATCCACATGCCTTGTTCCTTGCTGCAGCACTGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGATAAAGAGAAGAAGTTaGCTCCAGTTGACTGGAAAT +
Preference number: 4 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRIKRRS*LQLTGN
Trigger: ATTTCCAGTCAACTGGAGTCAACTTCTTCTCTTTAT...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR TCA 90 bp AGAGGAGGTGGGTTTAGAGGAAAAAGGACTTTTATGACTGCTAGGAGTTTGGTGTTGCTGCTAAAGTGTTaGCTTAGGTCTATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RGGGFRGKRTFMTARSLVLLLKC*LRSISE
Trigger: TTCAGAAATAGACCTAAGTCAACACTTTAGCAGCAA...CACCAAACTCCTAGCAGTCATAAAAGTCCTTTTTCCTCTAAACCCACCTCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR TCA 90 bp TTTAGATGGGGACTCGCTTTGTTACCCAGTGGTATAATCTTGGCTCATTGCAACTGGATTGGTAGTCTATaGCATCATTCAATCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FRWGLALLPSGIILAHCNWIGSL*HHSISS
Trigger: TGAAGAGATTGAATGATGTCATAGACTACCAATCCA...GTTGCAATGAGCCAAGATTATACCACTGGGTAACAAAGCGAGTCCCCATCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR GCA 90 bp AGGAGAGAAAAATCACAGCACGAAGACTTGGTGAAATGTAACCAAGATGTCATTAATGAACCACAGAAGTaGCAAGAATTGGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: RREKSQHEDLVKCNQDVINEPQK*QELGTE
Trigger: TTCTGTGCCCAATTCTTGGCACTTCTGTGGTTCATT...AATGACATCTTGGTTACATTTCACCAAGTCTTCGTGCTGTGATTTTTCTCTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CCA 90 bp AATAAAAGAAGCTTTACAACAGGTACTAGCAGGACAATAAAGAACAGCCAGCCAAACGCTGACAAAACATaGGAAATGGTAGCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: NKRSFTTGTSRTIKNSQPNADKT*EMVALL
Trigger: TAGCAAGGCTACCATTTCCCATGTTTTGTCAGCGTT...TGGCTGGCTGTTCTTTATTGTCCTGCTAGTACCTGTTGTAAAGCTTCTTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS GCA 90 bp GGGTCTCGGGGGCCACCCATCCGCCTTAAGGAAGGCTGGCGGGGATaGGCGGGCCCGGGAGTCCAGGGCGCCGCCACCGGGAACGCGCCG +
Preference number: 5 (lower is better)
Translates to: GSRGPPIRLKEGWRG*AGPGVQGAATGNAP
Trigger: CGGCGCGTTCCCGGTGGCGGCGCCCTGGACTCCCGGGCCCGCGCATCCCCGCCAGCCTTCCTTAAGGCGGATGGGTGGCCCCCGAGACCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268797.12
ENST00000602377.1
ENST00000602496.1
ENST00000602855.2
CDS CCA 90 bp AGACATGGCTCCTGGCACGCTGGCATCGCCCACTCCGCGCTGCACTaGAAACCATGGGTCCGACGGGGTCTCGGGGGCCACCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: RHGSWHAGIAHSALH*KPWVRRGLGGHPSA
Trigger: GGCGGATGGGTGGCCCCCGAGACCCCGTCGGACCCATGGTTTCCAGTGCAGCGCGGAGTGGGCGATGCCAGCGTGCCAGGAGCCATGTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268797.12
ENST00000602279.2
ENST00000602377.1
ENST00000602496.1
ENST00000602855.2
CDS GCA 90 bp TGGTCAGACATGGCTCCTGGCACGCTGGCATCGCCCACTCCGCGCTaGACTGGAAACCATGGGTCCGACGGGGTCTCGGGGGCCACCCAT +
Preference number: 5 (lower is better)
Translates to: WSDMAPGTLASPTPR*TGNHGSDGVSGATH
Trigger: ATGGGTGGCCCCCGAGACCCCGTCGGACCCATGGTTTCCAGTGCAGCGCGGAGTGGGCGATGCCAGCGTGCCAGGAGCCATGTCTGACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268797.12
ENST00000602279.2
ENST00000602377.1
ENST00000602496.1
ENST00000602855.2
CDS CCA 90 bp TCCTGGCACGCTGGCATCGCCCACTCCGCGCTGCACTGGAAACCATaGGTCCGACGGGGTCTCGGGGGCCACCCATCCGCCTTAAGGAAG +
Preference number: 5 (lower is better)
Translates to: SWHAGIAHSALHWKP*VRRGLGGHPSALRK
Trigger: CTTCCTTAAGGCGGATGGGTGGCCCCCGAGACCCCGTCGGACCCATGGTTTCCAGTGCAGCGCGGAGTGGGCGATGCCAGCGTGCCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268797.12
ENST00000602279.2
ENST00000602377.1
ENST00000602496.1
ENST00000602855.2
CDS-3UTR CAA 90 bp CCCTGCTCAGGCAGTCCTGCGCCCACTGCCAGCGAGTCCCTCAAGAGCAGCTCCTCACACAGGTTCTGGTaGGTGTCGGGCTCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: PCSGSPAPTASESLKSSSSHRFW*VSGSSV
Trigger: GACGGAGGAGCCCGACACCAACCAGAACCTGTGTGA...GGAGCTGCTCTTGAGGGACTCGCTGGCAGTGGGCGCAGGACTGCCTGAGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS GCA 90 bp GTGACCCTCAGAGGACTGCCCAGAGGGAGAGACATGATCTGCCCCTaGTGTGGCCTGCCGGGCGTACCTAGAGCCTTCACGGATATCTGC +
Preference number: 5 (lower is better)
Translates to: VTLRGLPRGRDMICP*CGLPGVPRAFTDIC
Trigger: GCAGATATCCGTGAAGGCTCTAGGTACGCCCGGCAGGCCACAGCAGGGGCAGATCATGTCTCTCCCTCTGGGCAGTCCTCTGAGGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CAA 90 bp CAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCTGGTCCGACTCACTGGCATCAGATCGGCTCGACCTCTaGATGGCATCCACCACGCTC +
Preference number: 5 (lower is better)
Translates to: QAEGLPRVSLSWSDSLASDRLDL*MASTTL
Trigger: GAGCGTGGTGGATGCCATCAAGAGGTCGAGCCGATC...TGATGCCAGTGAGTCGGACCAGGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp CCCTGCAAGTCTGAGGAGCAGATGAGCCACTGGAGGGGGCGAAGTCCCAGAGCCTCCCTGAGGGACAGCTaGTTGCCCTCACTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PCKSEEQMSHWRGRSPRASLRDS*LPSLFL
Trigger: CAGGAACAGTGAGGGCAACAAGCTGTCCCTCAGGGA...GGCTCTGGGACTTCGCCCCCTCCAGTGGCTCATCTGCTCCTCAGACTTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp AATGAGGAAATGAGGTTCTCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAAAGGGTGGCCAGGCCCTaGCACGGGGCCCGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: NEEMRFSDTPPESCCSGQRVARP*HGARQG
Trigger: TCCCTGCCGGGCCCCGTGCAAGGGCCTGGCCACCCT...TTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGAGAACCTCATTTCCTCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CAA 90 bp GTCTCTGCTAGGGCCAAGTCCCTGTCATGTCTGGCTCCTGTTCCCCTCCCTGGTGATCGGCTCGACCTCTaGATGGCATCCACCACGCTC +
Preference number: 5 (lower is better)
Translates to: VSARAKSLSCLAPVPLPGDRLDL*MASTTL
Trigger: GAGCGTGGTGGATGCCATCAAGAGGTCGAGCCGATC...ACCAGGGAGGGGAACAGGAGCCAGACATGACAGGGACTTGGCCCTAGCAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp CACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCAGGCATCCACCGATGTaGCTGCCTTCTCGCAAACCA +
Preference number: 5 (lower is better)
Translates to: HPVRTADQAEGLPRVSLSRHPPM*LPSRKP
Trigger: TGGTTTGCGAGAAGGCAGCAACATCGGTGGATGCCT...GGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp TGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCCCGAGCTGGCCCCTCTaGTGCTTTCTCACCCTGTTA +
Preference number: 5 (lower is better)
Translates to: WPLLCFLTLLGLRIRLKGPSWPL*CFLTLL
Trigger: TAACAGGGTGAGAAAGCACAAGAGGGGCCAGCTCGG...GCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp CCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCTCCCTGAGGGACAGCTaGTTGCCCTCACTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PLLCFLTLLGLRIRLKGSSLRDS*LPSLFL
Trigger: CAGGAACAGTGAGGGCAACAAGCTGTCCCTCAGGGA...GGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp CCTGTAGTCCTGGCTACTTGCAAAGCCGAGGCAGGAGTATCGCTTGAACCTGGGTGTAATCCCAGCACTTaGGGAGGCGGCCAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: PVVLATCKAEAGVSLEPGCNPST*GGGQGR
Trigger: CCTGCCTTGGCCGCCTCCCAAAGTGCTGGGATTACA...CCCAGGTTCAAGCGATACTCCTGCCTCGGCTTTGCAAGTAGCCAGGACTACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS CCA 90 bp CCCAATACCCTTCTAGTTGAAGCCCATCTGGGCAATGTGTGCACCTaGGCTTCTCCTCCACAGCCATCCAGGCTCCACTCTGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: PNTLLVEAHLGNVCT*ASPPQPSRLHSGTP
Trigger: TGGAGTGCCAGAGTGGAGCCTGGATGGCTGTGGAGGAGAAGCCCAGGTGCACACATTGCCCAGATGGGCTTCAACTAGAAGGGTATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602627.1
CDS-3UTR CAA 90 bp CTGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGAGGCATCCACCGATGTaGCTGCCTTCTCGCAAACCA +
Preference number: 5 (lower is better)
Translates to: LAPLVLSHPVRTADQAEGRHPPM*LPSRKP
Trigger: TGGTTTGCGAGAAGGCAGCAACATCGGTGGATGCCT...CCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp CCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCAGGGTGAGCCTTTCCTGGCCTGGCATGTTGAAGTaGAGTGTCACTGTGCTACAC +
Preference number: 5 (lower is better)
Translates to: PVRTADQAEGLPRVSLSWPGMLK*SVTVLH
Trigger: GTGTAGCACAGTGACACTCAACTTCAACATGCCAGG...CCAGGAAAGGCTCACCCTGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp CTGGCCCCTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCAAGAGCAGCTCCTCTaGCGTGGCAGAGTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LAPLVLSHPVRTADQAEGQEQLL*RGRVLL
Trigger: CAGAAGAACTCTGCCACGCAAGAGGAGCTGCTCTTG...CCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAGGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp GTGTCACATACCTGGGATAGGGTGGCCAGGCCCTTGCACGGGGCCCGGCAGGGAATGACTGCTAGGAGTTaGGTGGTGATAAAACTAGGA +
Preference number: 5 (lower is better)
Translates to: VSHTWDRVARPLHGARQGMTARS*VVIKLG
Trigger: TCCTAGTTTTATCACCACCAAACTCCTAGCAGTCAT...TCCCTGCCGGGCCCCGTGCAAGGGCCTGGCCACCCTATCCCAGGTATGTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CAA 90 bp GCAGCTCTGCCCTGTGCACACCGTGGTAACCTGGCAACAGGAACATTTGCCACCTGGCAACAGGAACATTaGCCACCCTGCAAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: AALPCAHRGNLATGTFATWQQEH*PPCKSE
Trigger: CTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCA...GGTGGCAAATGTTCCTGTTGCCAGGTTACCACGGTGTGCACAGGGCAGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp GCGTCCTGCAGAGCCTACCACCATGACTTCATGCACAAAGGCGCCTGGCATGTTCTGAGGGACAGCTTGTaGCCCTCACTGTTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: ASCRAYHHDFMHKGAWHVLRDSL*PSLFLR
Trigger: TCTCAGGAACAGTGAGGGCAACAAGCTGTCCCTCAG...AACATGCCAGGCGCCTTTGTGCATGAAGTCATGGTGGTAGGCTCTGCAGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602377.1
CDS-3UTR CAA 90 bp TCATGTCCACCAGAGTCACCTGCAAGGCTTGTTCAGACACAGATAGCTGGATCCGCCGGGATTGCGCCATaGAACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: SCPPESPARLVQTQIAGSAGIAP*NSSLGN
Trigger: GTTGCCCAGGCTGGAGTTCAATGGCGCAATCCCGGC...GGATCCAGCTATCTGTGTCTGAACAAGCCTTGCAGGTGACTCTGGTGGACATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp GAGAGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTTCCAGCCTGCATTCGTGACCAATAGCGGCTaGCTTCCCCTTGAACCAACT +
Preference number: 5 (lower is better)
Translates to: ESLQSSGSGHTSPFQPAFVTNSG*LPLEPT
Trigger: AGTTGGTTCAAGGGGAAGCAAGCCGCTATTGGTCAC...GAATGCAGGCTGGAAAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS-3UTR CAA 90 bp GTGTCACATACCTGGGATAGGGTGGCCAGGCCCTTGCACGGGGCCCGGCAGGGAGCACAACGTGCAGGTTaGTTACATATGTATACATGT +
Preference number: 5 (lower is better)
Translates to: VSHTWDRVARPLHGARQGAQRAG*LHMYTC
Trigger: ACATGTATACATATGTAACAAACCTGCACGTTGTGC...TCCCTGCCGGGCCCCGTGCAAGGGCCTGGCCACCCTATCCCAGGTATGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS GCA 90 bp ATTCTTCCCAATACCCTTCTAGTTGAAGCCCATCTGGGCAATGTGTaGACCTGGGCTTCTCCTCCACAGCCATCCAGGCTCCACTCTGGC +
Preference number: 5 (lower is better)
Translates to: ILPNTLLVEAHLGNV*TWASPPQPSRLHSG
Trigger: GCCAGAGTGGAGCCTGGATGGCTGTGGAGGAGAAGCCCAGGTGCACACATTGCCCAGATGGGCTTCAACTAGAAGGGTATTGGGAAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602627.1
CDS-3UTR CAA 90 bp CTCTTGTGCTTTCTCACCCTGTTAGGACTGCGGATCAGGCTGAAGGGCTCCCCATGGCAACAGGAACATTaGCCACCCTGCAAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: LLCFLTLLGLRIRLKGSPWQQEH*PPCKSE
Trigger: CTCAGACTTGCAGGGTGGCAAATGTTCCTGTTGCCA...TGGGGAGCCCTTCAGCCTGATCCGCAGTCCTAACAGGGTGAGAAAGCACAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp TCCTCTCTGCCAAACCAGGGCCCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACCTGAGGGACAGCTTGTaGCCCTCACTGTTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: SSLPNQGPLSYFKSPRAHLRDSL*PSLFLR
Trigger: TCTCAGGAACAGTGAGGGCAACAAGCTGTCCCTCAG...GTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGGGCCCTGGTTTGGCAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp AGGAGAGAAAAATCACAGCACGAAGACTTGGTGAAATGTAACCAAGATGTCATTAGGGTGGCCAGGCCCTaGCACGGGGCCCGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: RREKSQHEDLVKCNQDVIRVARP*HGARQG
Trigger: TCCCTGCCGGGCCCCGTGCAAGGGCCTGGCCACCCT...AATGACATCTTGGTTACATTTCACCAAGTCTTCGTGCTGTGATTTTTCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS GCA 90 bp GAAGTGAGAATACCCTTTTTGCCCTCACACCCATTCTGGGTACGCTaGAGCCAACACGCACCCAGAGGTAAACAAAGCTGGACAAAGCCC +
Preference number: 5 (lower is better)
Translates to: EVRIPFLPSHPFWVR*SQHAPRGKQSWTKP
Trigger: GGGCTTTGTCCAGCTTTGTTTACCTCTGGGTGCGTGTTGGCTGCAGCGTACCCAGAATGGGTGTGAGGGCAAAAAGGGTATTCTCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602522.1
CDS-3UTR CAA 90 bp GAGAGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTTCCAGCCTGCATTCCTTACTTGCTCCAAATaGACAACCGGACAGACTGAA +
Preference number: 5 (lower is better)
Translates to: ESLQSSGSGHTSPFQPAFLTCSK*TTGQTE
Trigger: TTCAGTCTGTCCGGTTGTCAATTTGGAGCAAGTAAG...GAATGCAGGCTGGAAAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp CCAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCAAGAGCAGCTCCTCTaGCGTGGCAGAGTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: PRTKQNFSSFLLRPQPSWQEQLL*RGRVLL
Trigger: CAGAAGAACTCTGCCACGCAAGAGGAGCTGCTCTTG...CCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp CCTCTGTCCTACTTCAAAAGCCCAAGAGCTCACTTAATAAAGCAAGCCCCAGTCCCGAGCTGGCCCCTCTaGTGCTTTCTCACCCTGTTA +
Preference number: 5 (lower is better)
Translates to: PLSYFKSPRAHLIKQAPVPSWPL*CFLTLL
Trigger: TAACAGGGTGAGAAAGCACAAGAGGGGCCAGCTCGG...GACTGGGGCTTGCTTTATTAAGTGAGCTCTTGGGCTTTTGAAGTAGGACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp TTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATAGCTGGGAAATGGTAGCCTaGCTACACAGCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FQPAFKPQGMARSQVTNSWEMVA*LHSLSF
Trigger: GAAGGAGAGGCTGTGTAGCAAGGCTACCATTTCCCA...GCTATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp TCAGACACCCCACCTGAGAGCTGCTGTTCTGGCCAATTCAGAAGCCTCCTGCTAAGAGATTCAGTAGGTTaGGAGTGGGGCCTGAGAATT +
Preference number: 5 (lower is better)
Translates to: SDTPPESCCSGQFRSLLLRDSVG*EWGLRI
Trigger: AATTCTCAGGCCCCACTCCAAACCTACTGAATCTCT...TAGCAGGAGGCTTCTGAATTGGCCAGAACAGCAGCTCTCAGGTGGGGTGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp TCATGTCCACCAGAGTCACCTGCAAGGCTTGTTCAGACACAGATAGCTGGATCCAGTGCTTCTCCACACTaGTGGGCCTTCCAGATTAGG +
Preference number: 5 (lower is better)
Translates to: SCPPESPARLVQTQIAGSSASPH*WAFQIR
Trigger: CCTAATCTGGAAGGCCCACAAGTGTGGAGAAGCACT...GGATCCAGCTATCTGTGTCTGAACAAGCCTTGCAGGTGACTCTGGTGGACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp ACTGTTCCTGAGATGCCCCAGCCCAAGAACGAAACAAAACTTCTCATCATTTCTTCACACAGGTTCTGGTaGGTGTCGGGCTCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: TVPEMPQPKNETKLLIISSHRFW*VSGSSV
Trigger: GACGGAGGAGCCCGACACCAACCAGAACCTGTGTGA...AGAAATGATGAGAAGTTTTGTTTCGTTCTTGGGCTGGGGCATCTCAGGAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp CCTTTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATTTCTTCCCGTATAGCTaGGAAATGGTCTCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: PFQPAFKPQGMARSQVTNFFPYS*EMVSVG
Trigger: CCCCACAGAGACCATTTCCAAGCTATACGGGAAGAA...ATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602855.2
CDS GCA 90 bp CAGGAAATCTCAAAGTTTCAAGGGGGAATCTCCAGCATGTCCGCCTaGCCTGAGGATTTTGGACTTCTCTGCCTTACAACTGCACGAACT +
Preference number: 5 (lower is better)
Translates to: QEISKFQGGISSMSA*PEDFGLLCLTTART
Trigger: AGTTCGTGCAGTTGTAAGGCAGAGAAGTCCAAAATCCTCAGGGCAGGCGGACATGCTGGAGATTCCCCCTTGAAACTTTGAGATTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602522.1
CDS-3UTR CAA 90 bp CAAGAACGAAACAAAACTTCTCATCATTTCTCCTCAGGCCTCAGCCGAGCTGGCCCTGGCATGTTGAAGTaGAGTGTCACTGTGCTACAC +
Preference number: 5 (lower is better)
Translates to: QERNKTSHHFSSGLSRAGPGMLK*SVTVLH
Trigger: GTGTAGCACAGTGACACTCAACTTCAACATGCCAGG...GCCAGCTCGGCTGAGGCCTGAGGAGAAATGATGAGAAGTTTTGTTTCGTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp ATGCCCAGTCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGAGGCAAACTTTATGTaGACTGAGATGCAACCATCT +
Preference number: 5 (lower is better)
Translates to: MPSQGQEVTKPKTSQGSGEANFM*TEMQPS
Trigger: AGATGGTTGCATCTCAGTCAACATAAAGTTTGCCTC...TCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGACTGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CAA 90 bp TTCCAGCCTGCATTCAAGCCACAAGGGATGGCAAGGAGTCAAGTGACCAATAGCGCATCAAGGAGACACTaGGCTCCTATTACCTCACAT +
Preference number: 5 (lower is better)
Translates to: FQPAFKPQGMARSQVTNSASRRH*APITSH
Trigger: ATGTGAGGTAATAGGAGCCAAGTGTCTCCTTGATGC...GCTATTGGTCACTTGACTCCTTGCCATCCCTTGTGGCTTGAATGCAGGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp AGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGAAAGAGGGAAAGACCCCCACAGGAGACAAATaGGTGCCTCTGGTCAACCCT +
Preference number: 5 (lower is better)
Translates to: RIRNSCFMPQEVRKEGKTPTGDK*VPLVNP
Trigger: AGGGTTGACCAGAGGCACCAATTTGTCTCCTGTGGG...GGTCTTTCCCTCTTTCCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp TTGTTTTATCATACGTACTGTTTATTAGGCCTCTCCGAGAGTCAGGCCCAGCCTGTGACCAATAGCGGCTaGCTTCCCCTTGAACCAACT +
Preference number: 5 (lower is better)
Translates to: LFYHTYCLLGLSESQAQPVTNSG*LPLEPT
Trigger: AGTTGGTTCAAGGGGAAGCAAGCCGCTATTGGTCAC...AGGCTGGGCCTGACTCTCGGAGAGGCCTAATAAACAGTACGTATGATAAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp AGGATTACAAACCTCAGTGCTGCAGCAAGGAACAAGGCATGTGGATTGGTAGTCTATAATCTTGGCTCATaGCAACCTCCGCTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: RITNLSAAARNKACGLVVYNLGS*QPPLPG
Trigger: CCCAGGAAGCGGAGGTTGCAATGAGCCAAGATTATA...GACTACCAATCCACATGCCTTGTTCCTTGCTGCAGCACTGAGGTTTGTAATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp CCTGTAGTCCTGGCTACTTGCAAAGCCGAGGCAGGAGTATCGCTTGAACCTGGGGAAAGACCTCTCTTCTaGAATCTGAAAAATAGTCTG +
Preference number: 5 (lower is better)
Translates to: PVVLATCKAEAGVSLEPGERPLF*NLKNSL
Trigger: CAGACTATTTTTCAGATTCAAGAAGAGAGGTCTTTC...CCCAGGTTCAAGCGATACTCCTGCCTCGGCTTTGCAAGTAGCCAGGACTACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp TCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATGGTGAATTTTGCCATTaGGCTGCTGAACACATATGG +
Preference number: 5 (lower is better)
Translates to: SGARGYQAQNFPREWRCHGEFCH*AAEHIW
Trigger: CCATATGTGTTCAGCAGCCAAATGGCAAAATTCACC...ATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CAA 90 bp TCAGGAAGAAGACTGAGAGCCTCCAGAGTTCTGGCTCCGGACACACCTCACCTTGCACAACGTGCAGGTTaGTTACATATGTATACATGT +
Preference number: 5 (lower is better)
Translates to: SGRRLRASRVLAPDTPHLAQRAG*LHMYTC
Trigger: ACATGTATACATATGTAACAAACCTGCACGTTGTGC...AAGGTGAGGTGTGTCCGGAGCCAGAACTCTGGAGGCTCTCAGTCTTCTTCCTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp ACTGTTCCTGAGATGCCCCAGCCCAAGAACGAAACAAAACTTCTCATCATTTCTAAGGCGCCTGGCATGTaGAAGTTGAGTGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: TVPEMPQPKNETKLLIISKAPGM*KLSVTV
Trigger: CACAGTGACACTCAACTTCAACATGCCAGGCGCCTT...AGAAATGATGAGAAGTTTTGTTTCGTTCTTGGGCTGGGGCATCTCAGGAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268797.12
ENST00000602377.1
CDS-3UTR CAA 90 bp GGTGGTGATAAAACTAGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGTGGGAAATGGTAGCCTaGCTACACAGCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GGDKTRIRNSCFMPQEVRWEMVA*LHSLSF
Trigger: GAAGGAGAGGCTGTGTAGCAAGGCTACCATTTCCCA...CCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCTAGTTTTATCACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CAA 90 bp CCTTCCAGATTAGGGAAGACAATCACAGTTCTGGGGGTGAATTTTGCCATTTGGATACAAGACTGCAGTTaGGCAGGAAGGGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: PSRLGKTITVLGVNFAIWIQDCS*AGRVCA
Trigger: AGCACACACCCTTCCTGCCAAACTGCAGTCTTGTAT...CCAAATGGCAAAATTCACCCCCAGAACTGTGATTGTCTTCCCTAATCTGGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CAA 90 bp CTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCTGTTCAGGGTTCTTCCCGTATAGCTaGGAAATGGTCTCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: LQPLDGCLLEYFLNFCSGFFPYS*EMVSVG
Trigger: CCCCACAGAGACCATTTCCAAGCTATACGGGAAGAA...CCCTGAACAGAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp TCCTCTTTCTTCCCGTATAGCTTGGAAATGGTCTCTGTGGGGAACCCTAAAATTCAGAAGTGCCAAGAATaGGGCACAGAAGCCCACCTT +
Preference number: 5 (lower is better)
Translates to: SSFFPYSLEMVSVGNPKIQKCQE*GTEAHL
Trigger: AAGGTGGGCTTCTGTGCCCAATTCTTGGCACTTCTG...AATTTTAGGGTTCCCCACAGAGACCATTTCCAAGCTATACGGGAAGAAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp AGAGGAGGTGGGTTTAGAGGAAAAAGGACTTTTATGACTGCTAGGAGTTTGGTGAGTGCTTCTCCACACTaGTGGGCCTTCCAGATTAGG +
Preference number: 5 (lower is better)
Translates to: RGGGFRGKRTFMTARSLVSASPH*WAFQIR
Trigger: CCTAATCTGGAAGGCCCACAAGTGTGGAGAAGCACT...CACCAAACTCCTAGCAGTCATAAAAGTCCTTTTTCCTCTAAACCCACCTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CAA 90 bp GCAAGGAGTCAAGTGACCAATAGCGGCTTGCTTCCCCTTGAACCAACTTGCTGCAACAAGGCATGTGGATaGGTAGTCTATGACATCATT +
Preference number: 5 (lower is better)
Translates to: ARSQVTNSGLLPLEPTCCNKACG*VVYDII
Trigger: AATGATGTCATAGACTACCAATCCACATGCCTTGTT...GCAGCAAGTTGGTTCAAGGGGAAGCAAGCCGCTATTGGTCACTTGACTCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp AGAGGAGGTGGGTTTAGAGGAAAAAGGACTTTTATGACTGCTAGGAGTTTGGTGATACAAGACTGCAGTTaGGCAGGAAGGGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: RGGGFRGKRTFMTARSLVIQDCS*AGRVCA
Trigger: AGCACACACCCTTCCTGCCAAACTGCAGTCTTGTAT...CACCAAACTCCTAGCAGTCATAAAAGTCCTTTTTCCTCTAAACCCACCTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CAA 90 bp TCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATTATAATCTTGGCTCATaGCAACAAGAGGGAAACTCT +
Preference number: 5 (lower is better)
Translates to: SGARGYQAQNFPREWRCHYNLGS*QQEGNS
Trigger: AGAGTTTCCCTCTTGTTGCAATGAGCCAAGATTATA...ATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602496.1
CDS-3UTR CAA 90 bp TCAGGGGCAAGAGGTTACCAAGCCCAAAACTTCCCAAGGGAGTGGAGATGTCATCAATCTAACACAGCTTaGAATGTCCAAAATGACATC +
Preference number: 5 (lower is better)
Translates to: SGARGYQAQNFPREWRCHQSNTA*NVQNDI
Trigger: GATGTCATTTTGGACATTCAAAGCTGTGTTAGATTG...ATGACATCTCCACTCCCTTGGGAAGTTTTGGGCTTGGTAACCTCTTGCCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp AGGATAAGGAATTCCTGTTTCATGCCTCAAGAGGTGAGGAAAGAGGGAAAGACCAAGGCCAAAACTTACTaGCTCCAAATTGACAACCGG +
Preference number: 5 (lower is better)
Translates to: RIRNSCFMPQEVRKEGKTKAKTY*LQIDNR
Trigger: CCGGTTGTCAATTTGGAGCAAGTAAGTTTTGGCCTT...GGTCTTTCCCTCTTTCCTCACCTCTTGAGGCATGAAACAGGAATTCCTTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp AAATGGTCTCTGTGGGGAACCCTAAAATTCAGGAAGAAGACTGAGAGCCTCCAGTCACAGCACGAAGACTaGGTGAAATGTAACCAAGAT +
Preference number: 5 (lower is better)
Translates to: KWSLWGTLKFRKKTESLQSQHED*VKCNQD
Trigger: ATCTTGGTTACATTTCACCAAGTCTTCGTGCTGTGA...CTGGAGGCTCTCAGTCTTCTTCCTGAATTTTAGGGTTCCCCACAGAGACCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp CTCCAGCCCCTTGATGGCTGTCTCTTAGAGTATTTCCTTAATTTCTGTTCAGGGAGCTGTACAGAGTCTTaGGGTAGCCATGAAAGACAT +
Preference number: 5 (lower is better)
Translates to: LQPLDGCLLEYFLNFCSGSCTES*GSHERH
Trigger: ATGTCTTTCATGGCTACCCAAAGACTCTGTACAGCT...CCCTGAACAGAAATTAAGGAAATACTCTAAGAGACAGCCATCAAGGGGCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp TTTTTCATGCCCTCCCCAAGCACTGCTTCAGGGACAAGTGATGTCCCAGAGTTCGAAAGACCTCTCTTCTaGAATCTGAAAAATAGTCTG +
Preference number: 5 (lower is better)
Translates to: FFMPSPSTASGTSDVPEFERPLF*NLKNSL
Trigger: CAGACTATTTTTCAGATTCAAGAAGAGAGGTCTTTC...GAACTCTGGGACATCACTTGTCCCTGAAGCAGTGCTTGGGGAGGGCATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CAA 90 bp TTGTTTTATCATACGTACTGTTTATTAGGCCTCTCCGAGAGTCAGGCCCAGCCTGAGGCAAACTTTATGTaGACTGAGATGCAACCATCT +
Preference number: 5 (lower is better)
Translates to: LFYHTYCLLGLSESQAQPEANFM*TEMQPS
Trigger: AGATGGTTGCATCTCAGTCAACATAAAGTTTGCCTC...AGGCTGGGCCTGACTCTCGGAGAGGCCTAATAAACAGTACGTATGATAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp CCTTCCAGATTAGGGAAGACAATCACAGTTCTGGGGGTGAATTTTGCCATTTGGCAGAGCATCTGTCATTaGTACTTATGGGCATCTTAC +
Preference number: 5 (lower is better)
Translates to: PSRLGKTITVLGVNFAIWQSICH*YLWASY
Trigger: GTAAGATGCCCATAAGTACAAATGACAGATGCTCTG...CCAAATGGCAAAATTCACCCCCAGAACTGTGATTGTCTTCCCTAATCTGGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS-3UTR CAA 90 bp TTTAGATGGGGACTCGCTTTGTTACCCAGTGGTATAATCTTGGCTCATTGCAACATGACTGCTAGGAGTTaGGTGGTGATAAAACTAGGA +
Preference number: 5 (lower is better)
Translates to: FRWGLALLPSGIILAHCNMTARS*VVIKLG
Trigger: TCCTAGTTTTATCACCACCAAACTCCTAGCAGTCAT...GTTGCAATGAGCCAAGATTATACCACTGGGTAACAAAGCGAGTCCCCATCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS-3UTR CAA 90 bp AGGAGAGAAAAATCACAGCACGAAGACTTGGTGAAATGTAACCAAGATGTCATTGGTGAATTTTGCCATTaGGCTGCTGAACACATATGG +
Preference number: 5 (lower is better)
Translates to: RREKSQHEDLVKCNQDVIGEFCH*AAEHIW
Trigger: CCATATGTGTTCAGCAGCCAAATGGCAAAATTCACC...AATGACATCTTGGTTACATTTCACCAAGTCTTCGTGCTGTGATTTTTCTCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602279.2
CDS GCA 72 bp GGGCCACCCATCCGCCTTAAGGAAGGCTGGCGGGGATaGGCGGGCCCGGGAGTCCAGGGCGCCGCCACCGGG +
Preference number: 6 (lower is better)
Translates to: GPPIRLKEGWRG*AGPGVQGAATG
Trigger: CCCGGTGGCGGCGCCCTGGACTCCCGGGCCCGCGCATCCCCGCCAGCCTTCCTTAAGGCGGATGGGTGGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268797.12
ENST00000602279.2
ENST00000602377.1
ENST00000602496.1
ENST00000602855.2
CDS CCA 72 bp GGGTCTCGGGGGCCACCCATCCGCCTTAAGGAAGGCTaGCGGGGATGCGCGGGCCCGGGAGTCCAGGGCGCC +
Preference number: 6 (lower is better)
Translates to: GSRGPPIRLKEG*RGCAGPGVQGA
Trigger: GGCGCCCTGGACTCCCGGGCCCGCGCATCCCCGCCAGCCTTCCTTAAGGCGGATGGGTGGCCCCCGAGACCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268797.12
ENST00000602279.2
ENST00000602377.1
ENST00000602496.1
ENST00000602855.2
CDS CCA 72 bp GCTGGCATCGCCCACTCCGCGCTGCACTGGAAACCATaGGTCCGACGGGGTCTCGGGGGCCACCCATCCGCC +
Preference number: 6 (lower is better)
Translates to: AGIAHSALHWKP*VRRGLGGHPSA
Trigger: GGCGGATGGGTGGCCCCCGAGACCCCGTCGGACCCATGGTTTCCAGTGCAGCGCGGAGTGGGCGATGCCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268797.12
ENST00000602279.2
ENST00000602377.1
ENST00000602496.1
ENST00000602855.2
CDS CCA 72 bp TCCTGGCACGCTGGCATCGCCCACTCCGCGCTGCACTaGAAACCATGGGTCCGACGGGGTCTCGGGGGCCAC +
Preference number: 6 (lower is better)
Translates to: SWHAGIAHSALH*KPWVRRGLGGH
Trigger: GTGGCCCCCGAGACCCCGTCGGACCCATGGTTTCCAGTGCAGCGCGGAGTGGGCGATGCCAGCGTGCCAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268797.12
ENST00000602279.2
ENST00000602377.1
ENST00000602496.1
ENST00000602855.2
CDS GCA 72 bp ATGGCTCCTGGCACGCTGGCATCGCCCACTCCGCGCTaGACTGGAAACCATGGGTCCGACGGGGTCTCGGGG +
Preference number: 6 (lower is better)
Translates to: MAPGTLASPTPR*TGNHGSDGVSG
Trigger: CCCCGAGACCCCGTCGGACCCATGGTTTCCAGTGCAGCGCGGAGTGGGCGATGCCAGCGTGCCAGGAGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268797.12
ENST00000602279.2
ENST00000602377.1
ENST00000602496.1
ENST00000602855.2
CDS GCA 72 bp ACCCTCAGAGGACTGCCCAGAGGGAGAGACATGATCTaGCCCTGCTGTGGCCTGCCGGGCGTACCTAGAGCC +
Preference number: 6 (lower is better)
Translates to: TLRGLPRGRDMI*PCCGLPGVPRA
Trigger: GGCTCTAGGTACGCCCGGCAGGCCACAGCAGGGGCAGATCATGTCTCTCCCTCTGGGCAGTCCTCTGAGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS GCA 72 bp AGAGGACTGCCCAGAGGGAGAGACATGATCTGCCCCTaGTGTGGCCTGCCGGGCGTACCTAGAGCCTTCACG +
Preference number: 6 (lower is better)
Translates to: RGLPRGRDMICP*CGLPGVPRAFT
Trigger: CGTGAAGGCTCTAGGTACGCCCGGCAGGCCACAGCAGGGGCAGATCATGTCTCTCCCTCTGGGCAGTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602279.2
ENST00000602496.1
CDS CCA 72 bp AGAGCCTCTGGCATGGATATGATCTTCCAAACGTCCTaGTCAGACATGGCTCCTGGCACGCTGGCATCGCCC +
Preference number: 6 (lower is better)
Translates to: RASGMDMIFQTS*SDMAPGTLASP
Trigger: GGGCGATGCCAGCGTGCCAGGAGCCATGTCTGACCAGGACGTTTGGAAGATCATATCCATGCCAGAGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268797.12
ENST00000602279.2
ENST00000602377.1
ENST00000602496.1
ENST00000602855.2
CDS CAA 90 bp CATGTTTGGCTCCGGCAGGAAGGGAAGGAAGTGAGAATACCCTTTTaGCCCTCACACCCATTCTGGGTACGCTGCAGCCAACACGCACCC +
Preference number: 6 (lower is better)
Translates to: HVWLRQEGKEVRIPF*PSHPFWVRCSQHAP
Trigger: GGGTGCGTGTTGGCTGCAGCGTACCCAGAATGGGTGTGAGGGCAAAAAGGGTATTCTCACTTCCTTCCCTTCCTGCCGGAGCCAAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602522.1
CDS GCA 72 bp AATACCCTTCTAGTTGAAGCCCATCTGGGCAATGTGTaGACCTGGGCTTCTCCTCCACAGCCATCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: NTLLVEAHLGNV*TWASPPQPSRL
Trigger: GAGCCTGGATGGCTGTGGAGGAGAAGCCCAGGTGCACACATTGCCCAGATGGGCTTCAACTAGAAGGGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602627.1
CDS TCA 72 bp GTTTCAAGGGGGAATCTCCAGCATGTCCGCCTGCCCTaGGGATTTTGGACTTCTCTGCCTTACAACTGCACG +
Preference number: 6 (lower is better)
Translates to: VSRGNLQHVRLP*GFWTSLPYNCT
Trigger: CGTGCAGTTGTAAGGCAGAGAAGTCCAAAATCCTCAGGGCAGGCGGACATGCTGGAGATTCCCCCTTGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602522.1
CDS GCA 72 bp ATACCCTTTTTGCCCTCACACCCATTCTGGGTACGCTaGAGCCAACACGCACCCAGAGGTAAACAAAGCTGG +
Preference number: 6 (lower is better)
Translates to: IPFLPSHPFWVR*SQHAPRGKQSW
Trigger: CCAGCTTTGTTTACCTCTGGGTGCGTGTTGGCTGCAGCGTACCCAGAATGGGTGTGAGGGCAAAAAGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602522.1
CDS CCA 72 bp GAAGTGAGAATACCCTTTTTGCCCTCACACCCATTCTaGGTACGCTGCAGCCAACACGCACCCAGAGGTAAA +
Preference number: 6 (lower is better)
Translates to: EVRIPFLPSHPF*VRCSQHAPRGK
Trigger: TTTACCTCTGGGTGCGTGTTGGCTGCAGCGTACCCAGAATGGGTGTGAGGGCAAAAAGGGTATTCTCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602522.1
CDS CAA 72 bp TCCAACAAGTTAGAGTGGCCCAAGGCTAGAACATGTTaGGCTCCGGCAGGAAGGGAAGGAAGTGAGAATACC +
Preference number: 6 (lower is better)
Translates to: SNKLEWPKARTC*APAGREGSENT
Trigger: GGTATTCTCACTTCCTTCCCTTCCTGCCGGAGCCAAACATGTTCTAGCCTTGGGCCACTCTAACTTGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602522.1
CDS CAA 90 bp AAACACTGGTCCAACAAGTTAGAGTGGCCCAAGGCTAGAACATGTTaGGCTCCGGCAGGAAGGGAAGGAAGTGAGAATACCCTTTTTGCC +
Preference number: 6 (lower is better)
Translates to: KHWSNKLEWPKARTC*APAGREGSENTLFA
Trigger: GGCAAAAAGGGTATTCTCACTTCCTTCCCTTCCTGCCGGAGCCAAACATGTTCTAGCCTTGGGCCACTCTAACTTGTTGGACCAGTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602522.1
CDS CCA 72 bp TGGAGAACCCTGAATAACACAGGTGGGCTAGAGAGGTaGGCACACTTCATGGACGTGTCTCTATGTTGTCAT +
Preference number: 6 (lower is better)
Translates to: WRTLNNTGGLER*AHFMDVSLCCH
Trigger: ATGACAACATAGAGACACGTCCATGAAGTGTGCCCACCTCTCTAGCCCACCTGTGTTATTCAGGGTTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602522.1
CDS CAA 72 bp CATGAGACACTAACACCTGCAGTGTTCCTGCGAGCTTaGTGTGGTTCAAGTCGAAGGAAATCCTGTGCTAAT +
Preference number: 6 (lower is better)
Translates to: HETLTPAVFLRA*CGSSRRKSCAN
Trigger: ATTAGCACAGGATTTCCTTCGACTTGAACCACACAAAGCTCGCAGGAACACTGCAGGTGTTAGTGTCTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602522.1
CDS CAA 90 bp ATGAGCAGCCATGAGACACTAACACCTGCAGTGTTCCTGCGAGCTTaGTGTGGTTCAAGTCGAAGGAAATCCTGTGCTAATACTTTAAAT +
Preference number: 6 (lower is better)
Translates to: MSSHETLTPAVFLRA*CGSSRRKSCANTLN
Trigger: ATTTAAAGTATTAGCACAGGATTTCCTTCGACTTGAACCACACAAAGCTCGCAGGAACACTGCAGGTGTTAGTGTCTCATGGCTGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602522.1