RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GFM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000168827

Ensembl transcript IDs: ENST00000264263.9, ENST00000312756.4, ENST00000464732.1, ENST00000472383.1, ENST00000477721.1, ENST00000478251.1, ENST00000478254.5, ENST00000478576.5, ENST00000481468.1, ENST00000486715.6, ENST00000490261.1

Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGTGTGCTCCATCTTGCAGGACAAACCGGAGCCCAGAGAGCTTGTaGCCAGAAAGAGGGCCCTTCTCGCAGGCATCTAAAAACCCCTTT +
Preference number: 1 (lower is better)
Translates to: WCAPSCRTNRSPESL*PERGPFSQASKNPF
Trigger: AAAGGGGTTTTTAGATGCCTGCGAGAAGGGCCCTCTTTCTGGTCACAAGCTCTCTGGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR GCA 90 bp TCCTGCTCGGATGAAAGAGATTTCATTAGAATCAACCATGTGGTGTaGTCCATCTTGCAGGACAAACCGGAGCCCAGAGAGCTTGTGACC +
Preference number: 1 (lower is better)
Translates to: SCSDERDFIRINHVV*SILQDKPEPRELVT
Trigger: GGTCACAAGCTCTCTGGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCACATGGTTGATTCTAATGAAATCTCTTTCATCCGAGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR CCA 90 bp GTCAAACGGGACAGGGGCAGTAATGGTCTCTCGAAAGGCAACTTTTaGCTTTCCTGTGATACAAGGACAGCCATACTCTCTTTCCAGCCT +
Preference number: 1 (lower is better)
Translates to: VKRDRGSNGLSKGNF*LSCDTRTAILSFQP
Trigger: AGGCTGGAAAGAGAGTATGGCTGTCCTTGTATCACAGGAAAGCCAAAAGTTGCCTTTCGAGAGACCATTACTGCCCCTGTCCCGTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR CCA 90 bp CCTTCTCCTGCTCGGATGAAAGAGATTTCATTAGAATCAACCATGTaGTGTGCTCCATCTTGCAGGACAAACCGGAGCCCAGAGAGCTTG +
Preference number: 1 (lower is better)
Translates to: PSPARMKEISLESTM*CAPSCRTNRSPESL
Trigger: CAAGCTCTCTGGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCACATGGTTGATTCTAATGAAATCTCTTTCATCCGAGCAGGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR TCA 90 bp GTGATTACCCCATGGCGTCGGTTAATTCCTGCAATTACTTGTCCCTaGAATTCATTTGGAGCTACAACTTCCACAGCCATAATAGGTTCA +
Preference number: 1 (lower is better)
Translates to: VITPWRRLIPAITCP*NSFGATTSTAIIGS
Trigger: TGAACCTATTATGGCTGTGGAAGTTGTAGCTCCAAATGAATTTCAGGGACAAGTAATTGCAGGAATTAACCGACGCCATGGGGTAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR CCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTaGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTG +
Preference number: 1 (lower is better)
Translates to: YEQEGLLLKKEEPAS*AQNFLFQQPEFIPL
Trigger: CAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
3UTR TCA 90 bp AAATACTTATTAATGACGTCTTCTTGTGTGGATGGTAAACATGGCTaGTACCTGCTATACTCCATTGTGTATTCTCCCTTTCCCTCTGTG +
Preference number: 1 (lower is better)
Translates to: KYLLMTSSCVDGKHG*YLLYSIVYSPFPSV
Trigger: CACAGAGGGAAAGGGAGAATACACAATGGAGTATAGCAGGTATCAGCCATGTTTACCATCCACACAAGAAGACGTCATTAATAAGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472383.1
ENST00000478254.5
3UTR CAA 90 bp GATGAAAGAGATTTCATTAGAATCAACCATGTGGTGTGCTCCATCTaGCAGGACAAACCGGAGCCCAGAGAGCTTGTGACCAGAAAGAGG +
Preference number: 2 (lower is better)
Translates to: DERDFIRINHVVCSI*QDKPEPRELVTRKR
Trigger: CCTCTTTCTGGTCACAAGCTCTCTGGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCACATGGTTGATTCTAATGAAATCTCTTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR-3UTR TCA 90 bp CCTCCATCCTCCAATAGGCCCCAGTGTGTGTTGTTCCCCTCTGTGTGTCCATGTATTTTTAAAGTACAGTaGGGGTTGGGAATCAGTACA +
Preference number: 2 (lower is better)
Translates to: PPSSNRPQCVLFPSVCPCIFKVQ*GLGIST
Trigger: TGTACTGATTCCCAACCCTCACTGTACTTTAAAAAT...ACATGGACACACAGAGGGGAACAACACACACTGGGGCCTATTGGAGGATGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000486715.6
3UTR-3UTR TCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGCTTTTGGCTTTCCTGTaGTACAAGGACAGCCATACT +
Preference number: 2 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQLLAFL*YKDSHT
Trigger: AGTATGGCTGTCCTTGTATCACAGGAAAGCCAAAAG...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR-3UTR TCA 90 bp CCTGTAGCTTCCAAATACTTATTAATGACGTCTTCTTGTGTGGATGGTAAACATAGCCCAGAGAGCTTGTaGCCAGAAAGAGGGCCCTTC +
Preference number: 2 (lower is better)
Translates to: PVASKYLLMTSSCVDGKHSPESL*PERGPF
Trigger: GAAGGGCCCTCTTTCTGGTCACAAGCTCTCTGGGCT...ATGTTTACCATCCACACAAGAAGACGTCATTAATAAGTATTTGGAAGCTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR CAA 90 bp TTGCCCAGTGATTACCCCATGGCGTCGGTTAATTCCTGCAATTACTaGTCCCTGAAATTCATTTGGAGCTACAACTTCCACAGCCATAAT +
Preference number: 2 (lower is better)
Translates to: LPSDYPMASVNSCNY*SLKFIWSYNFHSHN
Trigger: ATTATGGCTGTGGAAGTTGTAGCTCCAAATGAATTTCAGGGACAAGTAATTGCAGGAATTAACCGACGCCATGGGGTAATCACTGGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR-3UTR TCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCAAAGAAGGGCTTCTTTTaGAGAAAGAAGAGCCCGCTT +
Preference number: 2 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPKKGFF*RKKSPL
Trigger: AAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTT...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
3UTR-3UTR GCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACAAAGAGCACCTTCTCCTaGTCGGATGAAAGAGATTTC +
Preference number: 2 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTKSTFS*SDERDF
Trigger: GAAATCTCTTTCATCCGAGCAGGAGAAGGTGCTCTT...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR-3UTR TCA 90 bp AAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAAAAGAAGGGCTTCTTTTaGAGAAAGAAGAGCCCGCTT +
Preference number: 2 (lower is better)
Translates to: KYQNHADSIRVSQLTVSKKKGFF*RKKSPL
Trigger: AAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTT...TTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
3UTR-3UTR TCA 90 bp ACAGCAGGCACAAACTGCTTTGGAATATTTGATCCGAATGTTTCATCTGAAAATCTTGTTTCAGCAGCCTaGATTTATTCCACTGGAATC +
Preference number: 2 (lower is better)
Translates to: TAGTNCFGIFDPNVSSENLVSAA*IYSTGI
Trigger: GATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAG...ATTTTCAGATGAAACATTCGGATCAAATATTCCAAAGCAGTTTGTGCCTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR-3UTR TCA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATCTTGTTTCAGCAGCCTaGATTTATTCCACTGGAATC +
Preference number: 2 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNLVSAA*IYSTGI
Trigger: GATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAG...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
3UTR-3UTR TCA 90 bp AATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCGAAAAACACTCTCTATaGAGAACATACGGAATCCAC +
Preference number: 2 (lower is better)
Translates to: NDTPRSVMIYAIHFQVFSEKHSL*RTYGIH
Trigger: GTGGATTCCGTATGTTCTTCATAGAGAGTGTTTTTC...GCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
3UTR-3UTR TCA 90 bp TTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACTTGTTTCAGCAGCCTaGATTTATTCCACTGGAATC +
Preference number: 2 (lower is better)
Translates to: FLFQQPEFIPLESIKVSKLVSAA*IYSTGI
Trigger: GATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAG...TTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
3UTR-3UTR TCA 90 bp AATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCCCTGCCAATACCTTTTaGAAATTTTTCCAGATCGTT +
Preference number: 2 (lower is better)
Translates to: NDTPRSVMIYAIHFQVFSPANTF*KFFQIV
Trigger: AACGATCTGGAAAAATTTTCAAAAGGTATTGGCAGG...GCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR-3UTR GCA 90 bp AATGGTATTGCTGAGTCAGATGGTTTTTGTCTTAGAAGACCCCATCTCTTAAAATTCAACAGAAAAGCCTaGCCATTAATGACACTCCAA +
Preference number: 2 (lower is better)
Translates to: NGIAESDGFCLRRPHLLKFNRKA*PLMTLQ
Trigger: TTGGAGTGTCATTAATGGGCAGGCTTTTCTGTTGAA...TTTTAAGAGATGGGGTCTTCTAAGACAAAAACCATCTGACTCAGCAATACCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000486715.6
3UTR-3UTR GCA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTTTCAACAGAAAAGCCTaGCCATTAATGACACTCCAA +
Preference number: 2 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTFNRKA*PLMTLQ
Trigger: TTGGAGTGTCATTAATGGGCAGGCTTTTCTGTTGAA...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
3UTR-3UTR CCA 90 bp TCATTTGGAGCTACAACTTCCACAGCCATAATAGGTTCAAGAATACATAATGTTACAAAGGAAGGTAGATaGAAAGTATGTGGTTATTCT +
Preference number: 2 (lower is better)
Translates to: SFGATTSTAIIGSRIHNVTKEGR*KVCGYS
Trigger: AGAATAACCACATACTTTCCATCTACCTTCCTTTGT...AACATTATGTATTCTTGAACCTATTATGGCTGTGGAAGTTGTAGCTCCAAATGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR CCA 72 bp GACAGGGGCAGTAATGGTCTCTCGAAAGGCAACTTTTaGCTTTCCTGTGATACAAGGACAGCCATACTCTCT +
Preference number: 3 (lower is better)
Translates to: DRGSNGLSKGNF*LSCDTRTAILS
Trigger: AGAGAGTATGGCTGTCCTTGTATCACAGGAAAGCCAAAAGTTGCCTTTCGAGAGACCATTACTGCCCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR CCA 72 bp GCTCGGATGAAAGAGATTTCATTAGAATCAACCATGTaGTGTGCTCCATCTTGCAGGACAAACCGGAGCCCA +
Preference number: 3 (lower is better)
Translates to: ARMKEISLESTM*CAPSCRTNRSP
Trigger: TGGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCACATGGTTGATTCTAATGAAATCTCTTTCATCCGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR GCA 72 bp GATGAAAGAGATTTCATTAGAATCAACCATGTGGTGTaGTCCATCTTGCAGGACAAACCGGAGCCCAGAGAG +
Preference number: 3 (lower is better)
Translates to: DERDFIRINHVV*SILQDKPEPRE
Trigger: CTCTCTGGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCACATGGTTGATTCTAATGAAATCTCTTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR-3UTR CAA 90 bp ATTAATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCGTGGTGTGCTCCATCTaGCAGGACAAACCGGAGCCC +
Preference number: 3 (lower is better)
Translates to: INDTPRSVMIYAIHFQVFVVCSI*QDKPEP
Trigger: GGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCAC...GAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR TCA 72 bp CAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTaGAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAATT +
Preference number: 3 (lower is better)
Translates to: QKLLNMNKKGFF*RKKSPLPGLRI
Trigger: AATTCTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
3UTR GCA 72 bp TTGCCCAGTGATTACCCCATGGCGTCGGTTAATTCCTaGAATTACTTGTCCCTGAAATTCATTTGGAGCTAC +
Preference number: 3 (lower is better)
Translates to: LPSDYPMASVNS*NYLSLKFIWSY
Trigger: GTAGCTCCAAATGAATTTCAGGGACAAGTAATTGCAGGAATTAACCGACGCCATGGGGTAATCACTGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR GCA 72 bp CGTCTTCTTGTGTGGATGGTAAACATGGCTGATACCTaGTATACTCCATTGTGTATTCTCCCTTTCCCTCTG +
Preference number: 3 (lower is better)
Translates to: RLLVWMVNMADT*YTPLCILPFPL
Trigger: CAGAGGGAAAGGGAGAATACACAATGGAGTATAGCAGGTATCAGCCATGTTTACCATCCACACAAGAAGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472383.1
ENST00000478254.5
3UTR-3UTR CAA 90 bp AGGATAATGGCTTCCAGCTCCATCTATGTCCCTGCAAAGGACTTGATCTCATTCTGCTACAGACTTTGGTaGGTATGTGATCTTTGCCAA +
Preference number: 3 (lower is better)
Translates to: RIMASSSIYVPAKDLISFCYRLW*VCDLCQ
Trigger: TTGGCAAAGATCACATACCAACCAAAGTCTGTAGCA...GAATGAGATCAAGTCCTTTGCAGGGACATAGATGGAGCTGGAAGCCATTATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486715.6
3UTR-3UTR CAA 90 bp AATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCTGCATTTGCCAAGGCTaGTTTAAGAGCACCTTCTCC +
Preference number: 3 (lower is better)
Translates to: NDTPRSVMIYAIHFQVFSCICQG*FKSTFS
Trigger: GGAGAAGGTGCTCTTAAACAAGCCTTGGCAAATGCA...GCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR GCA 72 bp TGCATTTGCCAAGGCTTGTTTAAGAGCACCTTCTCCTaGTCGGATGAAAGAGATTTCATTAGAATCAACCAT +
Preference number: 3 (lower is better)
Translates to: CICQGLFKSTFS*SDERDFIRINH
Trigger: ATGGTTGATTCTAATGAAATCTCTTTCATCCGAGCAGGAGAAGGTGCTCTTAAACAAGCCTTGGCAAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR GCA 72 bp CTCCCACCAGCTAGGCCTGAATCATTACCTATGAAATaGTGGTGTTGGATTAAATATCTAGGACCTTTTCTA +
Preference number: 3 (lower is better)
Translates to: LPPARPESLPMK*WCWIKYLGPFL
Trigger: TAGAAAAGGTCCTAGATATTTAATCCAACACCAGCATTTCATAGGTAATGATTCAGGCCTAGCTGGTGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
3UTR CCA 72 bp GATGTGCAGGCTTGTTACATAGCTAAACTTGTGTCCTaGGGGTTTGTTGTACAGATTATTTCATCATCAAGG +
Preference number: 3 (lower is better)
Translates to: DVQACYIAKLVS*GFVVQIISSSR
Trigger: CCTTGATGATGAAATAATCTGTACAACAAACCCCCAGGACACAAGTTTAGCTATGTAACAAGCCTGCACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
3UTR TCA 72 bp TTAATGACGTCTTCTTGTGTGGATGGTAAACATGGCTaGTACCTGCTATACTCCATTGTGTATTCTCCCTTT +
Preference number: 3 (lower is better)
Translates to: LMTSSCVDGKHG*YLLYSIVYSPF
Trigger: AAAGGGAGAATACACAATGGAGTATAGCAGGTATCAGCCATGTTTACCATCCACACAAGAAGACGTCATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472383.1
ENST00000478254.5
3UTR CCA 72 bp CCACCAGCTAGGCCTGAATCATTACCTATGAAATGCTaGTGTTGGATTAAATATCTAGGACCTTTTCTAACA +
Preference number: 3 (lower is better)
Translates to: PPARPESLPMKC*CWIKYLGPFLT
Trigger: TGTTAGAAAAGGTCCTAGATATTTAATCCAACACCAGCATTTCATAGGTAATGATTCAGGCCTAGCTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
3UTR-3UTR CAA 90 bp ATGAAAGAGATTTCATTAGAATCAACCATGTGGTGTGCTCCATCTTGCAGGACAACCTGCCAATACCTTTaGAAAATTTTTCCAGATCGT +
Preference number: 3 (lower is better)
Translates to: MKEISLESTMWCAPSCRTTCQYL*KIFPDR
Trigger: ACGATCTGGAAAAATTTTCAAAAGGTATTGGCAGGT...TGTCCTGCAAGATGGAGCACACCACATGGTTGATTCTAATGAAATCTCTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR TCA 72 bp TGTGGGATCTTCTCTTGTAAACCTGCCAATACCTTTTaGAAATTTTTCCAGATCGTTCTTGTTAGAAGGCTT +
Preference number: 3 (lower is better)
Translates to: CGIFSCKPANTF*KFFQIVLVRRL
Trigger: AAGCCTTCTAACAAGAACGATCTGGAAAAATTTTCAAAAGGTATTGGCAGGTTTACAAGAGAAGATCCCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR-3UTR CAA 90 bp CCTGTAGCTTCCAAATACTTATTAATGACGTCTTCTTGTGTGGATGGTAAACATACTGCTTTGGAATATTaGATCCGAATGTTTCATCTG +
Preference number: 3 (lower is better)
Translates to: PVASKYLLMTSSCVDGKHTALEY*IRMFHL
Trigger: CAGATGAAACATTCGGATCAAATATTCCAAAGCAGT...ATGTTTACCATCCACACAAGAAGACGTCATTAATAAGTATTTGGAAGCTACAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR TCA 72 bp TTCTTTATCCAGTCTATCAGTGATAGGCATTTAGGTTaGTTCCATATCTTTGCCATTATGAACAGTTCTGCA +
Preference number: 3 (lower is better)
Translates to: FFIQSISDRHLG*FHIFAIMNSSA
Trigger: TGCAGAACTGTTCATAATGGCAAAGATATGGAATCAACCTAAATGCCTATCACTGATAGACTGGATAAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR TCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGCCTGCCTCAGCCTCCTaGGCAGCTGGGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQPASAS*AAGATG
Trigger: GCCTGTAGCCCCAGCTGCTCAGGAGGCTGAGGCAGG...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR GCA 90 bp CCTCCATCCTCCAATAGGCCCCAGTGTGTGTTGTTCCCCTCTGTGTGTCCATGTCATTCAATTAGCTCCTaGCGGTGGTCAGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PPSSNRPQCVLFPSVCPCHSISS*RWSVAA
Trigger: GGCGGCCACTGACCACCGGCAGGAGCTAATTGAATG...ACATGGACACACAGAGGGGAACAACACACACTGGGGCCTATTGGAGGATGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR TCA 90 bp AGTCCTCTGGGTCCAGAGGCTCCAGGACACCTATTACTTTTCCATACTGGCCTGCTCCATCTTGCCCAGTaGTTACCCCATGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: SPLGPEAPGHLLLFHTGLLHLAQ*LPHGVG
Trigger: ACCGACGCCATGGGGTAATCACTGGGCAAGATGGAG...CAGGCCAGTATGGAAAAGTAATAGGTGTCCTGGAGCCTCTGGACCCAGAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR TCA 90 bp CCTCCATCCTCCAATAGGCCCCAGTGTGTGTTGTTCCCCTCTGTGTGTCCATGTGTGGTCTCGAACTCCTaGCCTCAGGTTATCCACCCA +
Preference number: 4 (lower is better)
Translates to: PPSSNRPQCVLFPSVCPCVVSNS*PQVIHP
Trigger: TGGGTGGATAACCTGAGGTCAGGAGTTCGAGACCAC...ACATGGACACACAGAGGGGAACAACACACACTGGGGCCTATTGGAGGATGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGCTGCAGGGCCCTGGCTaGGTTGGAGCCCATTCGGTC +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQLQGPG*VGAHSV
Trigger: GACCGAATGGGCTCCAACCCAGCCAGGGCCCTGCAG...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp GAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTTCCCGTGGCGCCGGGTaGGTTCAGCTGCCGGTAACG +
Preference number: 4 (lower is better)
Translates to: EYEQEGLLLKKEEPASWASRGAG*VQLPVT
Trigger: CGTTACCGGCAGCTGAACCCACCCGGCGCCACGGGA...AGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp AGTCCTCTGGGTCCAGAGGCTCCAGGACACCTATTACTTTTCCATACTGGCCTGAGTTTAGACCTCATTTaGTGCAGGGCCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPLGPEAPGHLLLFHTGLSLDLI*CRALAG
Trigger: CCCAGCCAGGGCCCTGCAGCAAATGAGGTCTAAACT...CAGGCCAGTATGGAAAAGTAATAGGTGTCCTGGAGCCTCTGGACCCAGAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR CCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGCCTGCCGGTGGTCAGTaGCCGCCGCCCTTAATTCAG +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQPAGGQ*PPPLIQ
Trigger: CTGAATTAAGGGCGGCGGCCACTGACCACCGGCAGG...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp GAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAGCCGCGACGGCTaGAGCTCCCAGGAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: EYEQEGLLLKKEEPASWAQSRDG*SSQESH
Trigger: ATGAGACTCCTGGGAGCTGCAGCCGTCGCGGCTCTG...AGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp GAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAATGGGCCCTGGCTGGGTTaGAGCCCATTCGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: EQEGLLLKKEEPASWAQNGPWLG*SPFGPI
Trigger: AATTGGACCGAATGGGCTCCAACCCAGCCAGGGCCC...ATTCTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp CCTCCATCCTCCAATAGGCCCCAGTGTGTGTTGTTCCCCTCTGTGTGTCCATGTTTATCAAGCCAGGCATaGTGGTGTGTGCCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: PPSSNRPQCVLFPSVCPCLSSQA*WCVPLV
Trigger: GACAAGAGGCACACACCACCATGCCTGGCTTGATAA...ACATGGACACACAGAGGGGAACAACACACACTGGGGCCTATTGGAGGATGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR GCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCACAGAGCCGCGACGGCTaGAGCTCCCAGGAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPQSRDG*SSQESH
Trigger: ATGAGACTCCTGGGAGCTGCAGCCGTCGCGGCTCTG...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp AGGATAATGGCTTCCAGCTCCATCTATGTCCCTGCAAAGGACTTGATCTCATTCGCTGGAGTGCTGGAGTaGTGGAGTGCAGTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RIMASSSIYVPAKDLISFAGVLE*WSAVVP
Trigger: TGGCACCACTGCACTCCAGCACTCCAGCACTCCAGC...GAATGAGATCAAGTCCTTTGCAGGGACATAGATGGAGCTGGAAGCCATTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR GCA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCCAGAGCCGCGACGGCTaGAGCTCCCAGGAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPQSRDG*SSQESH
Trigger: ATGAGACTCCTGGGAGCTGCAGCCGTCGCGGCTCTG...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAGTTTAGACCTCATTTaGTGCAGGGCCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQSLDLI*CRALAG
Trigger: CCCAGCCAGGGCCCTGCAGCAAATGAGGTCTAAACT...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAGGCATGGTGGTGTGTaGCTCTTGTCCCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQRHGGV*LLSQLL
Trigger: GAGTAGCTGGGACAAGAGGCACACACCACCATGCCT...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CCA 90 bp AGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATCTGCAGGGCCCTGGCTaGGTTGGAGCCCATTCGGTC +
Preference number: 4 (lower is better)
Translates to: SSLNLFHWNPSKYQNHADLQGPG*VGAHSV
Trigger: GACCGAATGGGCTCCAACCCAGCCAGGGCCCTGCAG...ATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATTTGCTGCAGGGCCCTaGCTGGGTTGGAGCCCATTC +
Preference number: 4 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPFAAGP*LGWSPF
Trigger: GAATGGGCTCCAACCCAGCCAGGGCCCTGCAGCAAA...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACTCCCGTGGCGCCGGGTaGGTTCAGCTGCCGGTAACG +
Preference number: 4 (lower is better)
Translates to: CFSSLNLFHWNPSKYQNHSRGAG*VQLPVT
Trigger: CGTTACCGGCAGCTGAACCCACCCGGCGCCACGGGA...GTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACACGCGTCAAAGTCCCGTaGCGCCGGGTGGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTRVKVP*RRVGSA
Trigger: AGCTGAACCCACCCGGCGCCACGGGACTTTGACGCG...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478254.5
ENST00000486715.6
3UTR CAA 72 bp ACCCACCCTCCATCCTCCAATAGGCCCCAGTGTGTGTaGTTCCCCTCTGTGTGTCCATGTGTTCTCATTATT +
Preference number: 4 (lower is better)
Translates to: THPPSSNRPQCV*FPSVCPCVLII
Trigger: AATAATGAGAACACATGGACACACAGAGGGGAACAACACACACTGGGGCCTATTGGAGGATGGAGGGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR TCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCAAGCCCAGAGAGCTTGTaGCCAGAAAGAGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPSPESL*PERGPF
Trigger: GAAGGGCCCTCTTTCTGGTCACAAGCTCTCTGGGCT...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp CCTCCATCCTCCAATAGGCCCCAGTGTGTGTTGTTCCCCTCTGTGTGTCCATGTGATGGTAAACATGGCTaGTACCTGCTATACTCCATT +
Preference number: 4 (lower is better)
Translates to: PPSSNRPQCVLFPSVCPCDGKHG*YLLYSI
Trigger: AATGGAGTATAGCAGGTATCAGCCATGTTTACCATC...ACATGGACACACAGAGGGGAACAACACACACTGGGGCCTATTGGAGGATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CCA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGGGCCCTGGCTGGGTTaGAGCCCATTCGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPGPWLG*SPFGPI
Trigger: AATTGGACCGAATGGGCTCCAACCCAGCCAGGGCCC...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACACCTGCCGGTGGTCAGTaGCCGCCGCCCTTAATTCAG +
Preference number: 4 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTPAGGQ*PPPLIQ
Trigger: CTGAATTAAGGGCGGCGGCCACTGACCACCGGCAGG...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp GAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAATTTTAGTGTAGTCCTCTaGGTCCAGAGGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EQEGLLLKKEEPASWAQNFSVVL*VQRLQD
Trigger: GTCCTGGAGCCTCTGGACCCAGAGGACTACACTAAA...ATTCTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
3UTR CAA 72 bp GATTTCATTAGAATCAACCATGTGGTGTGCTCCATCTaGCAGGACAAACCGGAGCCCAGAGAGCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: DFIRINHVVCSI*QDKPEPRELVT
Trigger: GGTCACAAGCTCTCTGGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCACATGGTTGATTCTAATGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
3UTR CAA 72 bp TCCCACCTACTTAGGCAGCTGAGATGGGATAATTGCTaGAACCCAGGAAGCAGAGGTTGTAGTGAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SHLLRQLRWDNC*NPGSRGCSEQR
Trigger: TCTCTGCTCACTACAACCTCTGCTTCCTGGGTTCAAGCAATTATCCCATCTCAGCTGCCTAAGTAGGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR TCA 90 bp CCTCCATCCTCCAATAGGCCCCAGTGTGTGTTGTTCCCCTCTGTGTGTCCATGTGCAATTACTTGTCCCTaGAATTCATTTGGAGCTACA +
Preference number: 4 (lower is better)
Translates to: PPSSNRPQCVLFPSVCPCAITCP*NSFGAT
Trigger: TGTAGCTCCAAATGAATTTCAGGGACAAGTAATTGC...ACATGGACACACAGAGGGGAACAACACACACTGGGGCCTATTGGAGGATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR GCA 90 bp AGTCCTCTGGGTCCAGAGGCTCCAGGACACCTATTACTTTTCCATACTGGCCTGGCATCTTTGCAATTCTaGCAGTGTAGTAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: SPLGPEAPGHLLLFHTGLASLQF*QCSKGL
Trigger: GAGTCCTTTACTACACTGGCAGAATTGCAAAGATGC...CAGGCCAGTATGGAAAAGTAATAGGTGTCCTGGAGCCTCTGGACCCAGAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR GCA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCTCATGTCGGCATGCATaGGAGCCAGCCGTTGCAACC +
Preference number: 4 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPSCRHA*EPAVAT
Trigger: GGTTGCAACGGCTGGCTCGCATGCATGCCGACATGA...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCTCCATCATGTCGGCATaGATGCGAGCCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPSIMSA*MRASRC
Trigger: GCAACGGCTGGCTCGCATGCATGCCGACATGATGGA...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCACTGCAGGGCCCTGGCTaGGTTGGAGCCCATTCGGTC +
Preference number: 4 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESLQGPG*VGAHSV
Trigger: GACCGAATGGGCTCCAACCCAGCCAGGGCCCTGCAG...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp AGTCCTCTGGGTCCAGAGGCTCCAGGACACCTATTACTTTTCCATACTGGCCTGATTACTTTTCCATACTaGCCTGCACCACCTGATTGT +
Preference number: 4 (lower is better)
Translates to: SPLGPEAPGHLLLFHTGLITFPY*PAPPDC
Trigger: ACAATCAGGTGGTGCAGGCCAGTATGGAAAAGTAAT...CAGGCCAGTATGGAAAAGTAATAGGTGTCCTGGAGCCTCTGGACCCAGAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR TCA 90 bp TTATGTGTAAAGTCAAACGGGACAGGGGCAGTAATGGTCTCTCGAAAGGCAACTGCTTCATCTGACGATTaGCAGTCATGGTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: LCVKSNGTGAVMVSRKATASSDD*QSWSGT
Trigger: AGTGCCAGACCATGACTGTCAATCGTCAGATGAAGC...AGTTGCCTTTCGAGAGACCATTACTGCCCCTGTCCCGTTTGACTTTACACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR GCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCAGCCTTCCAATTAACCTaGTTCCTCTGCCAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPAFQLT*FLCQPR
Trigger: CCTAGGCTGGCAGAGGAAGCAGGTTAATTGGAAGGC...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp TGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACTTCAAGCGACCCTCCTaGCTCAGCCTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CFSSLNLFHWNPSKYQNHFKRPS*LSLLSS
Trigger: GCTGCTCAGGAGGCTGAGGCAGGAGGGTCGCTTGAA...GTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR GCA 90 bp GAATTTCACAGATTTTTCATTTCATGTCTTGGGCTTAAGCGCAGTGCAGGCAATTTGCCTAGGCTGGAGTaGTGGAGTGCTGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: EFHRFFISCLGLKRSAGNLPRLE*WSAGVQ
Trigger: CTGCACTCCAGCACTCCAGCACTCCAGCCTAGGCAA...ATTGCCTGCACTGCGCTTAAGCCCAAGACATGAAATGAAAAATCTGTGAAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CCA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATATTAGCTCCTGCCGGTaGTCAGTGGCCGCCGCCCTT +
Preference number: 4 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNISSCR*SVAAAL
Trigger: AAGGGCGGCGGCCACTGACCACCGGCAGGAGCTAAT...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp AATGGTATTGCTGAGTCAGATGGTTTTTGTCTTAGAAGACCCCATCTCTTAAAAATTAGCTCCTGCCGGTaGTCAGTGGCCGCCGCCCTT +
Preference number: 4 (lower is better)
Translates to: NGIAESDGFCLRRPHLLKISSCR*SVAAAL
Trigger: AAGGGCGGCGGCCACTGACCACCGGCAGGAGCTAAT...TTTTAAGAGATGGGGTCTTCTAAGACAAAAACCATCTGACTCAGCAATACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATTTAGTGTAGTCCTCTaGGTCCAGAGGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPFSVVL*VQRLQD
Trigger: GTCCTGGAGCCTCTGGACCCAGAGGACTACACTAAA...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTCGCGTCAAAGTCCCGTaGCGCCGGGTGGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTRVKVP*RRVGSA
Trigger: AGCTGAACCCACCCGGCGCCACGGGACTTTGACGCG...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACATTAGACCTCATTTGCTaGAGGGCCCTGGCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTLDLIC*RALAGL
Trigger: CAACCCAGCCAGGGCCCTGCAGCAAATGAGGTCTAA...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCATGTCGGCATGCATaGGAGCCAGCCGTTGCAACC +
Preference number: 4 (lower is better)
Translates to: TGIHQSIKTTQIQLESVNSCRHA*EPAVAT
Trigger: GGTTGCAACGGCTGGCTCGCATGCATGCCGACATGA...GTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp AATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCTCCATCATGTCGGCATaGATGCGAGCCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: NDTPRSVMIYAIHFQVFSSIMSA*MRASRC
Trigger: GCAACGGCTGGCTCGCATGCATGCCGACATGATGGA...GCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp AGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTGGTGTGCTCCATCTTaGAGGACAAACCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SSLNLFHWNPSKYQNHADWCAPS*RTNRSP
Trigger: TGGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCA...ATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp GAATTACCTTTGAATATAACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTCCTGCCGGTGGTCAGTaGCCGCCGCCCTTAATTCAG +
Preference number: 4 (lower is better)
Translates to: ELPLNITEAPEYEQEGLLPAGGQ*PPPLIQ
Trigger: CTGAATTAAGGGCGGCGGCCACTGACCACCGGCAGG...AAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGTTATATTCAAAGGTAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp CCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCAAACTAAAAATTAGCTCCTGCCGGTaGTCAGTGGCCGCCGCCCTT +
Preference number: 4 (lower is better)
Translates to: PRSVMIYAIHFQVFSKLKISSCR*SVAAAL
Trigger: AAGGGCGGCGGCCACTGACCACCGGCAGGAGCTAAT...TTTTAGTTTGCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp GCATTTGCCAAGGCTTGTTTAAGAGCACCTTCTCCTGCTCGGATGAAAGAGATTATCAGGAACATGAATTaGCTCCATAGAAAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: AFAKACLRAPSPARMKEIIRNMN*LHRKAA
Trigger: AGCGGCCTTTCTATGGAGTCAATTCATGTTCCTGAT...AATCTCTTTCATCCGAGCAGGAGAAGGTGCTCTTAAACAAGCCTTGGCAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR TCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGACAGGATCAGGAACATaGATTGACTCCATAGAAAGG +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQTGSGT*IDSIER
Trigger: CCTTTCTATGGAGTCAATTCATGTTCCTGATCCTGT...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp ACAGCAGGCACAAACTGCTTTGGAATATTTGATCCGAATGTTTCATCTGAAAATAGCCCAGAGAGCTTGTaGCCAGAAAGAGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: TAGTNCFGIFDPNVSSENSPESL*PERGPF
Trigger: GAAGGGCCCTCTTTCTGGTCACAAGCTCTCTGGGCT...ATTTTCAGATGAAACATTCGGATCAAATATTCCAAAGCAGTTTGTGCCTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR TCA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATAGCCCAGAGAGCTTGTaGCCAGAAAGAGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNSPESL*PERGPF
Trigger: GAAGGGCCCTCTTTCTGGTCACAAGCTCTCTGGGCT...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCACTCCATCTTGCCCAGTaGTTACCCCATGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESLHLAQ*LPHGVG
Trigger: ACCGACGCCATGGGGTAATCACTGGGCAAGATGGAG...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTGGCAGGCAGAGAGCTTaGGCCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTGRQRA*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAAGCTCTCTGCCTGCC...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR GCA 90 bp CACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAAGTTAGTTCTTGGGCCTTCCAATTAACCTaGTTCCTCTGCCAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: HADSIRVSQLTVSKVSSWAFQLT*FLCQPR
Trigger: CCTAGGCTGGCAGAGGAAGCAGGTTAATTGGAAGGC...CCAAGAACTAACTTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR GCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGCACCTCATGCATCTTTaGAATTCTGCCAGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQHLMHL*NSASVV
Trigger: TACTACACTGGCAGAATTGCAAAGATGCATGAGGTG...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp TGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCTTAGACCTCATTTGCTaGAGGGCCCTGGCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: WNPSKYQNHADSIRVSQLLDLIC*RALAGL
Trigger: CAACCCAGCCAGGGCCCTGCAGCAAATGAGGTCTAA...GAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp TGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCAGTTTAGACCTCATTTaGTGCAGGGCCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WNPSKYQNHADSIRVSQLSLDLI*CRALAG
Trigger: CCCAGCCAGGGCCCTGCAGCAAATGAGGTCTAAACT...GAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCTCTGACTGCCAGACCTaGGATCCCAATTCCATAGCA +
Preference number: 4 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPSDCQT*DPNSIA
Trigger: TGCTATGGAATTGGGATCGCAGGTCTGGCAGTCAGA...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264263.9
CDS-3UTR GCA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCACATTCAATTAGCTCCTaGCGGTGGTCAGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESHSISS*RWSVAA
Trigger: GGCGGCCACTGACCACCGGCAGGAGCTAATTGAATG...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCAATGCGAGCCAGCCGTTaGAACCGTACTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPMRASR*NRTFFL
Trigger: AAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCAT...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp CCTGTAGCTTCCAAATACTTATTAATGACGTCTTCTTGTGTGGATGGTAAACATTCATGTCGGCATGCATaGGAGCCAGCCGTTGCAACC +
Preference number: 4 (lower is better)
Translates to: PVASKYLLMTSSCVDGKHSCRHA*EPAVAT
Trigger: GGTTGCAACGGCTGGCTCGCATGCATGCCGACATGA...ATGTTTACCATCCACACAAGAAGACGTCATTAATAAGTATTTGGAAGCTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR GCA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCATCCATCATGTCGGCATaGATGCGAGCCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESSIMSA*MRASRC
Trigger: GCAACGGCTGGCTCGCATGCATGCCGACATGATGGA...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTGGTGTGCTCCATCTTaGAGGACAAACCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TGIHQSIKTTQIQLESVNWCAPS*RTNRSP
Trigger: TGGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCA...GTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGGCGTCGGTTAATTCCTaGAATTACTTGTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQASVNS*NYLSLK
Trigger: TTTCAGGGACAAGTAATTGCAGGAATTAACCGACGC...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp GAATTACCTTTGAATATAACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTTGCTGCAGGGCCCTaGCTGGGTTGGAGCCCATTC +
Preference number: 4 (lower is better)
Translates to: ELPLNITEAPEYEQEGLLFAAGP*LGWSPF
Trigger: GAATGGGCTCCAACCCAGCCAGGGCCCTGCAGCAAA...AAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGTTATATTCAAAGGTAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTTTTGCTGCAGGGCCCTaGCTGGGTTGGAGCCCATTC +
Preference number: 4 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTFAAGP*LGWSPF
Trigger: GAATGGGCTCCAACCCAGCCAGGGCCCTGCAGCAAA...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCAAGGCCTACAAATGGGTaGGAATTGTCTCTACTGGAG +
Preference number: 4 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPRPTNG*ELSLLE
Trigger: CTCCAGTAGAGACAATTCCCACCCATTTGTAGGCCT...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGTCGAAAGGCAACTTTTaGCTTTCCTGTGATACAAGG +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQSKGNF*LSCDTR
Trigger: CCTTGTATCACAGGAAAGCCAAAAGTTGCCTTTCGA...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGATTACTTTTCCATACTaGCCTGCACCACCTGATTGT +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQITFPY*PAPPDC
Trigger: ACAATCAGGTGGTGCAGGCCAGTATGGAAAAGTAAT...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp GAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTTTAGAATCAACCATGTaGTGTGCTCCATCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: EYEQEGLLLKKEEPASWALESTM*CAPSCR
Trigger: CCTGCAAGATGGAGCACACCACATGGTTGATTCTAA...AGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp ATTAATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCCCTAGGCTGGAGTGCTaGAGTGCTGGAGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: INDTPRSVMIYAIHFQVFPRLEC*SAGVQW
Trigger: CCACTGCACTCCAGCACTCCAGCACTCCAGCCTAGG...GAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR TCA 90 bp AGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATGCTTCATCTGACGATTaGCAGTCATGGTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: SSLNLFHWNPSKYQNHADASSDD*QSWSGT
Trigger: AGTGCCAGACCATGACTGTCAATCGTCAGATGAAGC...ATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACTCCATCTTGCCCAGTaGTTACCCCATGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: FLFQQPEFIPLESIKVSKLHLAQ*LPHGVG
Trigger: ACCGACGCCATGGGGTAATCACTGGGCAAGATGGAG...TTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCACTTTCCCTCTGTGCATaGCCTAAGTTCAGTGGAATA +
Preference number: 4 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPLSLCA*PKFSGI
Trigger: TATTCCACTGAACTTAGGTCATGCACAGAGGGAAAG...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp GAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCTTGTTTCAGCAGCCTaGATTTATTCCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: EYEQEGLLLKKEEPASWALVSAA*IYSTGI
Trigger: GATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAG...AGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGCTCCAAGAAGTGTCATaGTATATGCGATTCACTTTC +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQLQEVS*YMRFTF
Trigger: GAAAGTGAATCGCATATATCATGACACTTCTTGGAG...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp GCATTTGCCAAGGCTTGTTTAAGAGCACCTTCTCCTGCTCGGATGAAAGAGATTCAGATGATTTTTGGATaGAGCAATTCTGAACCGGGT +
Preference number: 4 (lower is better)
Translates to: AFAKACLRAPSPARMKEIQMIFG*SNSEPG
Trigger: ACCCGGTTCAGAATTGCTTCATCCAAAAATCATCTG...AATCTCTTTCATCCGAGCAGGAGAAGGTGCTCTTAAACAAGCCTTGGCAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR TCA 90 bp GAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTTTAAGGCTCCCCCAGTaGTTTTTAAAGTACAGTGAG +
Preference number: 4 (lower is better)
Translates to: EYEQEGLLLKKEEPASWALRLPQ*FLKYSE
Trigger: CTCACTGTACTTTAAAAATCACTGGGGGAGCCTTAA...AGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR GCA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTCATTCAATTAGCTCCTaGCGGTGGTCAGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTHSISS*RWSVAA
Trigger: GGCGGCCACTGACCACCGGCAGGAGCTAATTGAATG...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCATGGTGTGCTCCATCTTaGAGGACAAACCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESWCAPS*RTNRSP
Trigger: TGGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCA...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCAATCAACCATGTGGTGTaGTCCATCTTGCAGGACAAA +
Preference number: 4 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPINHVV*SILQDK
Trigger: TTTGTCCTGCAAGATGGAGCACACCACATGGTTGAT...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCAAAGAGCACCTTCTCCTaGTCGGATGAAAGAGATTTC +
Preference number: 4 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPKSTFS*SDERDF
Trigger: GAAATCTCTTTCATCCGAGCAGGAGAAGGTGCTCTT...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACATCCTCAACTCCATCTTaGCCAGTGATTACCCCATGG +
Preference number: 4 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTSSTPS*PVITPW
Trigger: CCATGGGGTAATCACTGGGCAAGATGGAGTTGAGGA...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp GAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAATTTCAACAGAAAAGCCTaGCCATTAATGACACTCCAA +
Preference number: 4 (lower is better)
Translates to: EQEGLLLKKEEPASWAQNFNRKA*PLMTLQ
Trigger: TTGGAGTGTCATTAATGGGCAGGCTTTTCTGTTGAA...ATTCTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp AGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTTGACAGTCATGGTCTaGCACTGTACCCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: SSLNLFHWNPSKYQNHADLTVMV*HCTPPT
Trigger: TGTTGGAGGGGTACAGTGCCAGACCATGACTGTCAA...ATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCTTTAGTGTAGTCCTCTaGGTCCAGAGGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: WNPSKYQNHADSIRVSQLFSVVL*VQRLQD
Trigger: GTCCTGGAGCCTCTGGACCCAGAGGACTACACTAAA...GAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp AGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATCCAGTGATTACCCCATaGCGTCGGTTAATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSLNLFHWNPSKYQNHADPVITP*RRLIPA
Trigger: TGCAGGAATTAACCGACGCCATGGGGTAATCACTGG...ATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGGGTAATAGAACTGCTTaGGAAAGCCCAACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQGNRTA*ESPTFS
Trigger: AGAAAAAGTTGGGCTTTCCCAAGCAGTTCTATTACC...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAAGGAGTGCTGGAGTGCTaGAGTGCAGTGGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: FLFQQPEFIPLESIKVSKGVLEC*SAVVPS
Trigger: AGATGGCACCACTGCACTCCAGCACTCCAGCACTCC...TTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR TCA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGTTCCCAGAATCAATGTaGGCTGAGATTCCAATATTT +
Preference number: 4 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQFPESM*AEIPIF
Trigger: AAATATTGGAATCTCAGCTCACATTGATTCTGGGAA...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp CACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAAGTTAGTTCTTGGGGTGTAAGTGGCTGCTaGCTGAATAGTGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: HADSIRVSQLTVSKVSSWGVSGC*LNSDSS
Trigger: AGAGGAATCACTATTCAGTCAGCAGCCACTTACACC...CCAAGAACTAACTTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR TCA 90 bp TATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACGGTGTAAGTGGCTGCTaGCTGAATAGTGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: YEEHTESTLQQKSLPINDGVSGC*LNSDSS
Trigger: AGAGGAATCACTATTCAGTCAGCAGCCACTTACACC...GTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACATTTCCACTTCTATTGTaGAGTCCACATGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTFPLLL*SPHAQE
Trigger: CTCCTGGGCATGTGGACTTCACAATAGAAGTGGAAA...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp ACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACGCTTCATCTGACGATTaGCAGTCATGGTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: TGIHQSIKTTQIQLESVNASSDD*QSWSGT
Trigger: AGTGCCAGACCATGACTGTCAATCGTCAGATGAAGC...GTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp GCATTTGCCAAGGCTTGTTTAAGAGCACCTTCTCCTGCTCGGATGAAAGAGATTACCAAGCTGTTCATCTaGATTGGCAACACATTCAAT +
Preference number: 4 (lower is better)
Translates to: AFAKACLRAPSPARMKEITKLFI*IGNTFN
Trigger: ATTGAATGTGTTGCCAATTCAGATGAACAGCTTGGT...AATCTCTTTCATCCGAGCAGGAGAAGGTGCTCTTAAACAAGCCTTGGCAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR TCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCACAGATGATTTTTGGATaGAGCAATTCTGAACCGGGT +
Preference number: 4 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPQMIFG*SNSEPG
Trigger: ACCCGGTTCAGAATTGCTTCATCCAAAAATCATCTG...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ATTAATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCTTAGACCTCATTTGCTaGAGGGCCCTGGCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: INDTPRSVMIYAIHFQVFLDLIC*RALAGL
Trigger: CAACCCAGCCAGGGCCCTGCAGCAAATGAGGTCTAA...GAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACAATGCGAGCCAGCCGTTaGAACCGTACTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTMRASR*NRTFFL
Trigger: AAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCAT...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCATCAACCATGTGGTGTaGTCCATCTTGCAGGACAAA +
Preference number: 4 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPINHVV*SILQDK
Trigger: TTTGTCCTGCAAGATGGAGCACACCACATGGTTGAT...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp AATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCTTGACAGTCATGGTCTaGCACTGTACCCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: NDTPRSVMIYAIHFQVFSLTVMV*HCTPPT
Trigger: TGTTGGAGGGGTACAGTGCCAGACCATGACTGTCAA...GCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp ACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACCCAGTGATTACCCCATaGCGTCGGTTAATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TGIHQSIKTTQIQLESVNPVITP*RRLIPA
Trigger: TGCAGGAATTAACCGACGCCATGGGGTAATCACTGG...GTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp GAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTTTCCCAGAATCAATGTaGGCTGAGATTCCAATATTT +
Preference number: 4 (lower is better)
Translates to: EYEQEGLLLKKEEPASWAFPESM*AEIPIF
Trigger: AAATATTGGAATCTCAGCTCACATTGATTCTGGGAA...AGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGTTCCATGGAATCCATaGCAGCACCAACTCCATCTT +
Preference number: 4 (lower is better)
Translates to: CFSSLNLFHWNPSKYQNHVPWNP*QHQLHL
Trigger: AAGATGGAGTTGGTGCTGTCATGGATTCCATGGAAC...GTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTTTTCCACTTCTATTGTaGAGTCCACATGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FHWNPSKYQNHADSIRVSFPLLL*SPHAQE
Trigger: CTCCTGGGCATGTGGACTTCACAATAGAAGTGGAAA...ACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCAACCAAGCTGTTCATCTaGATTGGCAACACATTCAAT +
Preference number: 4 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPTKLFI*IGNTFN
Trigger: ATTGAATGTGTTGCCAATTCAGATGAACAGCTTGGT...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACCTTTTGGCTTTCCTGTaGTACAAGGACAGCCATACT +
Preference number: 4 (lower is better)
Translates to: YEEHTESTLQQKSLPINDLLAFL*YKDSHT
Trigger: AGTATGGCTGTCCTTGTATCACAGGAAAGCCAAAAG...GTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCCAGATGATTTTTGGATaGAGCAATTCTGAACCGGGT +
Preference number: 4 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPQMIFG*SNSEPG
Trigger: ACCCGGTTCAGAATTGCTTCATCCAAAAATCATCTG...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCGATGGGATAATTGCTTaGACCCAGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: WNPSKYQNHADSIRVSQLDGIIA*TQEAEV
Trigger: AACCTCTGCTTCCTGGGTTCAAGCAATTATCCCATC...GAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR GCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACAATACTTCTCTGTACTTaGCTCCATCATGTCGGCATG +
Preference number: 4 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTILLCT*LHHVGM
Trigger: CATGCCGACATGATGGAGGCAAGTACAGAGAAGTAT...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR GCA 90 bp GAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTAAGATGCTGAGGAAATaGCAAAGCAACCACATTTTT +
Preference number: 4 (lower is better)
Translates to: EYEQEGLLLKKEEPASWAKMLRK*QSNHIF
Trigger: AAAAATGTGGTTGCTTTGGCATTTCCTCAGCATCTT...AGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR GCA 90 bp AGGATAATGGCTTCCAGCTCCATCTATGTCCCTGCAAAGGACTTGATCTCATTCCATTATGAACAGTTCTaGAATGAATGTGTGCATGCA +
Preference number: 4 (lower is better)
Translates to: RIMASSSIYVPAKDLISFHYEQF*NECVHA
Trigger: TGCATGCACACATTCATTGCAGAACTGTTCATAATG...GAATGAGATCAAGTCCTTTGCAGGGACATAGATGGAGCTGGAAGCCATTATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CCA 90 bp AATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCAGGCCTACAAATGGGTaGGAATTGTCTCTACTGGAG +
Preference number: 4 (lower is better)
Translates to: NDTPRSVMIYAIHFQVFSRPTNG*ELSLLE
Trigger: CTCCAGTAGAGACAATTCCCACCCATTTGTAGGCCT...GCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTAGCCAGGCCTACAAATaGGTGGGAATTGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: FHWNPSKYQNHADSIRVSSQAYK*VGIVST
Trigger: AGTAGAGACAATTCCCACCCATTTGTAGGCCTGGCT...ACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCAGCCAGGCCTACAAATaGGTGGGAATTGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: WNPSKYQNHADSIRVSQLSQAYK*VGIVST
Trigger: AGTAGAGACAATTCCCACCCATTTGTAGGCCTGGCT...GAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp GAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAATACAAAGGAAGGTAGATaGAAAGTATGTGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: EQEGLLLKKEEPASWAQNTKEGR*KVCGYS
Trigger: AGAATAACCACATACTTTCCATCTACCTTCCTTTGT...ATTCTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp AAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAAAAAATTAGCAGGGAGTaGTGGCGCACACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: KYQNHADSIRVSQLTVSKKISRE*WRTPVV
Trigger: GACTACAGGTGTGCGCCACCACTCCCTGCTAATTTT...TTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CCA 90 bp GAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAATATGAAATGCTGGTGTTaGATTAAATATCTAGGACCT +
Preference number: 4 (lower is better)
Translates to: EQEGLLLKKEEPASWAQNMKCWC*IKYLGP
Trigger: AGGTCCTAGATATTTAATCCAACACCAGCATTTCAT...ATTCTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR TCA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCATTTCCACTTCTATTGTaGAGTCCACATGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESFPLLL*SPHAQE
Trigger: CTCCTGGGCATGTGGACTTCACAATAGAAGTGGAAA...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp CACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAAGTTAGTTCTTGGGCATCTAAAAGAGGCTaGACTCCTTTGTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: HADSIRVSQLTVSKVSSWASKRG*TPLFFK
Trigger: CTTGAAGAACAAAGGAGTTCAGCCTCTTTTAGATGC...CCAAGAACTAACTTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR TCA 90 bp TGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCATCAGGAACATGAATTaGCTCCATAGAAAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: WNPSKYQNHADSIRVSQLIRNMN*LHRKAA
Trigger: AGCGGCCTTTCTATGGAGTCAATTCATGTTCCTGAT...GAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp CACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAAGTTAGTTCTTGGACAGGATCAGGAACATaGATTGACTCCATAGAAAGG +
Preference number: 4 (lower is better)
Translates to: HADSIRVSQLTVSKVSSWTGSGT*IDSIER
Trigger: CCTTTCTATGGAGTCAATTCATGTTCCTGATCCTGT...CCAAGAACTAACTTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR TCA 90 bp GAATTTCACAGATTTTTCATTTCATGTCTTGGGCTTAAGCGCAGTGCAGGCAATACAGGATCAGGAACATaGATTGACTCCATAGAAAGG +
Preference number: 4 (lower is better)
Translates to: EFHRFFISCLGLKRSAGNTGSGT*IDSIER
Trigger: CCTTTCTATGGAGTCAATTCATGTTCCTGATCCTGT...ATTGCCTGCACTGCGCTTAAGCCCAAGACATGAAATGAAAAATCTGTGAAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR TCA 90 bp AATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCCTTTTGGCTTTCCTGTaGTACAAGGACAGCCATACT +
Preference number: 4 (lower is better)
Translates to: NDTPRSVMIYAIHFQVFSLLAFL*YKDSHT
Trigger: AGTATGGCTGTCCTTGTATCACAGGAAAGCCAAAAG...GCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTAAGAAGGGCTTCTTTTaGAGAAAGAAGAGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: FHWNPSKYQNHADSIRVSKKGFF*RKKSPL
Trigger: AAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTT...ACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp AATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCAAGAAGGGCTTCTTTTaGAGAAAGAAGAGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: NDTPRSVMIYAIHFQVFSKKGFF*RKKSPL
Trigger: AAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTT...GCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACAATGTCACAAGATGCTaGGGAAATGCCAAAGCAACC +
Preference number: 4 (lower is better)
Translates to: CFSSLNLFHWNPSKYQNHNVTRC*GNAKAT
Trigger: GGTTGCTTTGGCATTTCCTCAGCATCTTGTGACATT...GTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR GCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACACACCTCATGCATCTTTaGAATTCTGCCAGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTHLMHL*NSASVV
Trigger: TACTACACTGGCAGAATTGCAAAGATGCATGAGGTG...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACAAAATCCCTCAGGAAGTaGCCAAAGTCTCCATCAAAA +
Preference number: 4 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTKSLRK*PKSPSK
Trigger: TTTTGATGGAGACTTTGGGCACTTCCTGAGGGATTT...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264263.9
CDS-3UTR GCA 90 bp TTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTGTCAATGCCAAACAATaGACAGATGTCTCCGGCATA +
Preference number: 4 (lower is better)
Translates to: FHWNPSKYQNHADSIRVSVNAKQ*TDVSGI
Trigger: TATGCCGGAGACATCTGTGCATTGTTTGGCATTGAC...ACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp TGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACATCAACCATGTGGTGTaGTCCATCTTGCAGGACAAA +
Preference number: 4 (lower is better)
Translates to: CFSSLNLFHWNPSKYQNHINHVV*SILQDK
Trigger: TTTGTCCTGCAAGATGGAGCACACCACATGGTTGAT...GTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTTCCTCAACTCCATCTTaGCCAGTGATTACCCCATGG +
Preference number: 4 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTSSTPS*PVITPW
Trigger: CCATGGGGTAATCACTGGGCAAGATGGAGTTGAGGA...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACACTCCATCTATGTCCCTaGAAAGGACTTGATCTCATT +
Preference number: 4 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTLHLCP*KGLDLI
Trigger: AATGAGATCAAGTCCTTTGCAGGGACATAGATGGAG...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CCA 90 bp CCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCAAACTAAAATTGACAGTCATGGTCTaGCACTGTACCCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: PRSVMIYAIHFQVFSKLKLTVMV*HCTPPT
Trigger: TGTTGGAGGGGTACAGTGCCAGACCATGACTGTCAA...TTTTAGTTTGCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGGGAATTGTCTCTACTaGAGTTCATTAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPGNCLY*SSLGFW
Trigger: CCAAAATCCTAATGAACTCCAGTAGAGACAATTCCC...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCTCCTTGTGTTATAGATaGTGTCACCCTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPSLCYR*CHPSLA
Trigger: AGCTAAAGAAGGGTGACACCATCTATAACACAAGGA...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp ATTAATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCCCAGTGATTACCCCATaGCGTCGGTTAATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: INDTPRSVMIYAIHFQVFPVITP*RRLIPA
Trigger: TGCAGGAATTAACCGACGCCATGGGGTAATCACTGG...GAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp GAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTACAAAGGAAGGTAGATaGAAAGTATGTGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: EYEQEGLLLKKEEPASWATKEGR*KVCGYS
Trigger: AGAATAACCACATACTTTCCATCTACCTTCCTTTGT...AGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAAGTTCCATGGAATCCATaGCAGCACCAACTCCATCTT +
Preference number: 4 (lower is better)
Translates to: FLFQQPEFIPLESIKVSKVPWNP*QHQLHL
Trigger: AAGATGGAGTTGGTGCTGTCATGGATTCCATGGAAC...TTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp CCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCAAACTAAAAGGTGTAAGTGGCTGCTaGCTGAATAGTGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: PRSVMIYAIHFQVFSKLKGVSGC*LNSDSS
Trigger: AGAGGAATCACTATTCAGTCAGCAGCCACTTACACC...TTTTAGTTTGCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp AGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATACCAAGCTGTTCATCTaGATTGGCAACACATTCAAT +
Preference number: 4 (lower is better)
Translates to: SSLNLFHWNPSKYQNHADTKLFI*IGNTFN
Trigger: ATTGAATGTGTTGCCAATTCAGATGAACAGCTTGGT...ATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATATCAGGAACATGAATTaGCTCCATAGAAAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNIRNMN*LHRKAA
Trigger: AGCGGCCTTTCTATGGAGTCAATTCATGTTCCTGAT...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCCCTGCCAATACCTTTTaGAAATTTTTCCAGATCGTT +
Preference number: 4 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPPANTF*KFFQIV
Trigger: AACGATCTGGAAAAATTTTCAAAAGGTATTGGCAGG...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp AAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAACTTTTGGCTTTCCTGTaGTACAAGGACAGCCATACT +
Preference number: 4 (lower is better)
Translates to: KYQNHADSIRVSQLTVSKLLAFL*YKDSHT
Trigger: AGTATGGCTGTCCTTGTATCACAGGAAAGCCAAAAG...TTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCACTTTCCCTCTGTGCATaGCCTAAGTTCAGTGGAATA +
Preference number: 4 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESLSLCA*PKFSGI
Trigger: TATTCCACTGAACTTAGGTCATGCACAGAGGGAAAG...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATCTTTCCCTCTGTGCATaGCCTAAGTTCAGTGGAATA +
Preference number: 4 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNLSLCA*PKFSGI
Trigger: TATTCCACTGAACTTAGGTCATGCACAGAGGGAAAG...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATAAGAAGGGCTTCTTTTaGAGAAAGAAGAGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNKKGFF*RKKSPL
Trigger: AAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTT...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACACTCCAAGAAGTGTCATaGTATATGCGATTCACTTTC +
Preference number: 4 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTLQEVS*YMRFTF
Trigger: GAAAGTGAATCGCATATATCATGACACTTCTTGGAG...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACAGAAAAACACTCTCTATaGAGAACATACGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTEKHSL*RTYGIH
Trigger: GTGGATTCCGTATGTTCTTCATAGAGAGTGTTTTTC...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp AGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATGAAAAACACTCTCTATaGAGAACATACGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: SSLNLFHWNPSKYQNHADEKHSL*RTYGIH
Trigger: GTGGATTCCGTATGTTCTTCATAGAGAGTGTTTTTC...ATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp ACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACGCTCCCACTTATAAGTaGGAACATGCAGTATTTGGT +
Preference number: 4 (lower is better)
Translates to: TGIHQSIKTTQIQLESVNAPTYK*EHAVFG
Trigger: ACCAAATACTGCATGTTCTCACTTATAAGTGGGAGC...GTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR GCA 90 bp TGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCGCATCTTTGCAATTCTaGCAGTGTAGTAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: WNPSKYQNHADSIRVSQLASLQF*QCSKGL
Trigger: GAGTCCTTTACTACACTGGCAGAATTGCAAAGATGC...GAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp CCTGTAGCTTCCAAATACTTATTAATGACGTCTTCTTGTGTGGATGGTAAACATGTCAATGCCAAACAATaGACAGATGTCTCCGGCATA +
Preference number: 4 (lower is better)
Translates to: PVASKYLLMTSSCVDGKHVNAKQ*TDVSGI
Trigger: TATGCCGGAGACATCTGTGCATTGTTTGGCATTGAC...ATGTTTACCATCCACACAAGAAGACGTCATTAATAAGTATTTGGAAGCTACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR GCA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATGTCAATGCCAAACAATaGACAGATGTCTCCGGCATA +
Preference number: 4 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNVNAKQ*TDVSGI
Trigger: TATGCCGGAGACATCTGTGCATTGTTTGGCATTGAC...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ACAGCAGGCACAAACTGCTTTGGAATATTTGATCCGAATGTTTCATCTGAAAATAAGAGCACCTTCTCCTaGTCGGATGAAAGAGATTTC +
Preference number: 4 (lower is better)
Translates to: TAGTNCFGIFDPNVSSENKSTFS*SDERDF
Trigger: GAAATCTCTTTCATCCGAGCAGGAGAAGGTGCTCTT...ATTTTCAGATGAAACATTCGGATCAAATATTCCAAAGCAGTTTGTGCCTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR GCA 90 bp TGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCGTCGGTTAATTCCTaGAATTACTTGTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: CFSSLNLFHWNPSKYQNHASVNS*NYLSLK
Trigger: TTTCAGGGACAAGTAATTGCAGGAATTAACCGACGC...GTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp AAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAACTGAGATGGGATAATTaGTTGAACCCAGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: KYQNHADSIRVSQLTVSKLRWDN*LNPGSR
Trigger: TCTGCTTCCTGGGTTCAAGCAATTATCCCATCTCAG...TTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CCA 90 bp TATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACGGGAATTGTCTCTACTaGAGTTCATTAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: YEEHTESTLQQKSLPINDGNCLY*SSLGFW
Trigger: CCAAAATCCTAATGAACTCCAGTAGAGACAATTCCC...GTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp ATTAATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGGCCTACAAATGGGTaGGAATTGTCTCTACTGGAG +
Preference number: 4 (lower is better)
Translates to: INDTPRSVMIYAIHFQVFRPTNG*ELSLLE
Trigger: CTCCAGTAGAGACAATTCCCACCCATTTGTAGGCCT...GAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp AATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCTCGAAAGGCAACTTTTaGCTTTCCTGTGATACAAGG +
Preference number: 4 (lower is better)
Translates to: NDTPRSVMIYAIHFQVFSSKGNF*LSCDTR
Trigger: CCTTGTATCACAGGAAAGCCAAAAGTTGCCTTTCGA...GCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTTAGAATCAACCATGTaGTGTGCTCCATCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNLESTM*CAPSCR
Trigger: CCTGCAAGATGGAGCACACCACATGGTTGATTCTAA...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp AGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATGGTAATAGAACTGCTTaGGAAAGCCCAACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SSLNLFHWNPSKYQNHADGNRTA*ESPTFS
Trigger: AGAAAAAGTTGGGCTTTCCCAAGCAGTTCTATTACC...ATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTGCTACAGACTTTGGTTaGTATGTGATCTTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: FHWNPSKYQNHADSIRVSATDFG*YVIFAN
Trigger: GTTGGCAAAGATCACATACCAACCAAAGTCTGTAGC...ACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR TCA 90 bp AAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAAGCATCTAAAAGAGGCTaGACTCCTTTGTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: KYQNHADSIRVSQLTVSKASKRG*TPLFFK
Trigger: CTTGAAGAACAAAGGAGTTCAGCCTCTTTTAGATGC...TTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAAGGCTTCATTGCTATTaGAATGACAGGATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESRLHCY*NDRIRN
Trigger: GTTCCTGATCCTGTCATTTCAATAGCAATGAAGCCT...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAATTACTTGTCCCTaGAATTCATTTGGAGCTACA +
Preference number: 4 (lower is better)
Translates to: CFSSLNLFHWNPSKYQNHAITCP*NSFGAT
Trigger: TGTAGCTCCAAATGAATTTCAGGGACAAGTAATTGC...GTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTCTTTCCCTCTGTGCATaGCCTAAGTTCAGTGGAATA +
Preference number: 4 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTLSLCA*PKFSGI
Trigger: TATTCCACTGAACTTAGGTCATGCACAGAGGGAAAG...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp AAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAACTTGTTTCAGCAGCCTaGATTTATTCCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: KYQNHADSIRVSQLTVSKLVSAA*IYSTGI
Trigger: GATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAG...TTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTAAGAAGGGCTTCTTTTaGAGAAAGAAGAGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTKKGFF*RKKSPL
Trigger: AAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTT...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp AAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAACACCTCATGCATCTTTaGAATTCTGCCAGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: KYQNHADSIRVSQLTVSKHLMHL*NSASVV
Trigger: TACTACACTGGCAGAATTGCAAAGATGCATGAGGTG...TTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp AAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAAGCGTCGGTTAATTCCTaGAATTACTTGTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: KYQNHADSIRVSQLTVSKASVNS*NYLSLK
Trigger: TTTCAGGGACAAGTAATTGCAGGAATTAACCGACGC...TTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp TGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCTTCAACAGAAAAGCCTaGCCATTAATGACACTCCAA +
Preference number: 4 (lower is better)
Translates to: WNPSKYQNHADSIRVSQLFNRKA*PLMTLQ
Trigger: TTGGAGTGTCATTAATGGGCAGGCTTTTCTGTTGAA...GAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACGCTGTTCATCTGAATTaGCAACACATTCAATTAGCT +
Preference number: 4 (lower is better)
Translates to: YEEHTESTLQQKSLPINDAVHLN*QHIQLA
Trigger: AGCTAATTGAATGTGTTGCCAATTCAGATGAACAGC...GTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp ACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACGGGAATTGTCTCTACTaGAGTTCATTAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: TGIHQSIKTTQIQLESVNGNCLY*SSLGFW
Trigger: CCAAAATCCTAATGAACTCCAGTAGAGACAATTCCC...GTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTCGAAAGGCAACTTTTaGCTTTCCTGTGATACAAGG +
Preference number: 4 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNSKGNF*LSCDTR
Trigger: CCTTGTATCACAGGAAAGCCAAAAGTTGCCTTTCGA...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATATTACTTTTCCATACTaGCCTGCACCACCTGATTGT +
Preference number: 4 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNITFPY*PAPPDC
Trigger: ACAATCAGGTGGTGCAGGCCAGTATGGAAAAGTAAT...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp GAATTACCTTTGAATATAACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTCTTAGGCAGCTGAGATaGGATAATTGCTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: ELPLNITEAPEYEQEGLLLRQLR*DNCLNP
Trigger: TGGGTTCAAGCAATTATCCCATCTCAGCTGCCTAAG...AAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGTTATATTCAAAGGTAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR TCA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTGCATCTAAAAGAGGCTaGACTCCTTTGTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTASKRG*TPLFFK
Trigger: CTTGAAGAACAAAGGAGTTCAGCCTCTTTTAGATGC...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp ATTAATGACACTCCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGGCTTCATTGCTATTaGAATGACAGGATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: INDTPRSVMIYAIHFQVFRLHCY*NDRIRN
Trigger: GTTCCTGATCCTGTCATTTCAATAGCAATGAAGCCT...GAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGGAGTGTCATTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCCTGCCAATACCTTTTaGAAATTTTTCCAGATCGTT +
Preference number: 4 (lower is better)
Translates to: FHWNPSKYQNHADSIRVSPANTF*KFFQIV
Trigger: AACGATCTGGAAAAATTTTCAAAAGGTATTGGCAGG...ACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGCAATTACTTGTCCCTaGAATTCATTTGGAGCTACA +
Preference number: 4 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESAITCP*NSFGAT
Trigger: TGTAGCTCCAAATGAATTTCAGGGACAAGTAATTGC...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAAGATGGTAAACATGGCTaGTACCTGCTATACTCCATT +
Preference number: 4 (lower is better)
Translates to: FLFQQPEFIPLESIKVSKDGKHG*YLLYSI
Trigger: AATGGAGTATAGCAGGTATCAGCCATGTTTACCATC...TTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTGATGGTAAACATGGCTaGTACCTGCTATACTCCATT +
Preference number: 4 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTDGKHG*YLLYSI
Trigger: AATGGAGTATAGCAGGTATCAGCCATGTTTACCATC...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TCATTTGGAGCTACAACTTCCACAGCCATAATAGGTTCAAGAATACATAATGTTCTTGTTTCAGCAGCCTaGATTTATTCCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: SFGATTSTAIIGSRIHNVLVSAA*IYSTGI
Trigger: GATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAG...AACATTATGTATTCTTGAACCTATTATGGCTGTGGAAGTTGTAGCTCCAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR TCA 90 bp TGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACATTTTTAAAGTACAGTaGGGGTTGGGAATCAGTACA +
Preference number: 4 (lower is better)
Translates to: CFSSLNLFHWNPSKYQNHIFKVQ*GLGIST
Trigger: TGTACTGATTCCCAACCCTCACTGTACTTTAAAAAT...GTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR GCA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTGCATCTTTGCAATTCTaGCAGTGTAGTAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTASLQF*QCSKGL
Trigger: GAGTCCTTTACTACACTGGCAGAATTGCAAAGATGC...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp TTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTAACATGGCTGATACCTaGTATACTCCATTGTGTATT +
Preference number: 4 (lower is better)
Translates to: FHWNPSKYQNHADSIRVSNMADT*YTPLCI
Trigger: AATACACAATGGAGTATAGCAGGTATCAGCCATGTT...ACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp ACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACAACATGGCTGATACCTaGTATACTCCATTGTGTATT +
Preference number: 4 (lower is better)
Translates to: TGIHQSIKTTQIQLESVNNMADT*YTPLCI
Trigger: AATACACAATGGAGTATAGCAGGTATCAGCCATGTT...GTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp TGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACAACATGGCTGATACCTaGTATACTCCATTGTGTATT +
Preference number: 4 (lower is better)
Translates to: CFSSLNLFHWNPSKYQNHNMADT*YTPLCI
Trigger: AATACACAATGGAGTATAGCAGGTATCAGCCATGTT...GTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCATTCAACAGAAAAGCCTaGCCATTAATGACACTCCAA +
Preference number: 4 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESFNRKA*PLMTLQ
Trigger: TTGGAGTGTCATTAATGGGCAGGCTTTTCTGTTGAA...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp AGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTTGATTCCATATCTTTaGCATTATGAACAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSLNLFHWNPSKYQNHADLIPYL*HYEQFC
Trigger: GCAGAACTGTTCATAATGGCAAAGATATGGAATCAA...ATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CCA 90 bp ACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACGCTGTTCATCTGAATTaGCAACACATTCAATTAGCT +
Preference number: 4 (lower is better)
Translates to: TGIHQSIKTTQIQLESVNAVHLN*QHIQLA
Trigger: AGCTAATTGAATGTGTTGCCAATTCAGATGAACAGC...GTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTCCTTGTGTTATAGATaGTGTCACCCTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNSLCYR*CHPSLA
Trigger: AGCTAAAGAAGGGTGACACCATCTATAACACAAGGA...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCATCCTTGTGTTATAGATaGTGTCACCCTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESSLCYR*CHPSLA
Trigger: AGCTAAAGAAGGGTGACACCATCTATAACACAAGGA...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCATTCCCAGAATCAATGTaGGCTGAGATTCCAATATTT +
Preference number: 4 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESFPESM*AEIPIF
Trigger: AAATATTGGAATCTCAGCTCACATTGATTCTGGGAA...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp CCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCAAACTAAAACTCCAAGAAGTGTCATaGTATATGCGATTCACTTTC +
Preference number: 4 (lower is better)
Translates to: PRSVMIYAIHFQVFSKLKLQEVS*YMRFTF
Trigger: GAAAGTGAATCGCATATATCATGACACTTCTTGGAG...TTTTAGTTTGCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR TCA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATACTTTGGTTGGTATGTaGTCTTTGCCAACTATAACT +
Preference number: 4 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNTLVGM*SLPTIT
Trigger: AGTTATAGTTGGCAAAGATCACATACCAACCAAAGT...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CCA 90 bp AAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAAGCTGTTCATCTGAATTaGCAACACATTCAATTAGCT +
Preference number: 4 (lower is better)
Translates to: KYQNHADSIRVSQLTVSKAVHLN*QHIQLA
Trigger: AGCTAATTGAATGTGTTGCCAATTCAGATGAACAGC...TTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp GAATTACCTTTGAATATAACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTGGTAATAGAACTGCTTaGGAAAGCCCAACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: ELPLNITEAPEYEQEGLLGNRTA*ESPTFS
Trigger: AGAAAAAGTTGGGCTTTCCCAAGCAGTTCTATTACC...AAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGTTATATTCAAAGGTAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR GCA 90 bp GAATTACCTTTGAATATAACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTAACATGGCTGATACCTaGTATACTCCATTGTGTATT +
Preference number: 4 (lower is better)
Translates to: ELPLNITEAPEYEQEGLLNMADT*YTPLCI
Trigger: AATACACAATGGAGTATAGCAGGTATCAGCCATGTT...AAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGTTATATTCAAAGGTAATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CCA 90 bp TTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAAACAAAGGAAGGTAGATaGAAAGTATGTGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: FLFQQPEFIPLESIKVSKTKEGR*KVCGYS
Trigger: AGAATAACCACATACTTTCCATCTACCTTCCTTTGT...TTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS CCA 90 bp TTCCGCGCCCCAGAGCCGCGACGGCTGCAGCTCCCAGGAGTCTCATaGCAAGCGCAGAGCACGCGTCAAAGTCCCGTGGCGCCGGGTGGG +
Preference number: 5 (lower is better)
Translates to: FRAPEPRRLQLPGVS*QAQSTRQSPVAPGG
Trigger: CCCACCCGGCGCCACGGGACTTTGACGCGTGCTCTGCGCTTGCCATGAGACTCCTGGGAGCTGCAGCCGTCGCGGCTCTGGGGCGCGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS CCA 90 bp TCCCAGGAGTCTCATGGCAAGCGCAGAGCACGCGTCAAAGTCCCGTaGCGCCGGGTGGGTTCAGCTGCCGGTAACGCACCGGGAAGCGGT +
Preference number: 5 (lower is better)
Translates to: SQESHGKRRARVKVP*RRVGSAAGNAPGSG
Trigger: ACCGCTTCCCGGTGCGTTACCGGCAGCTGAACCCACCCGGCGCCACGGGACTTTGACGCGTGCTCTGCGCTTGCCATGAGACTCCTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS CCA 90 bp CTCATGGCAAGCGCAGAGCACGCGTCAAAGTCCCGTGGCGCCGGGTaGGTTCAGCTGCCGGTAACGCACCGGGAAGCGGTCAAAGTCACG +
Preference number: 5 (lower is better)
Translates to: LMASAEHASKSRGAG*VQLPVTHREAVKVT
Trigger: CGTGACTTTGACCGCTTCCCGGTGCGTTACCGGCAGCTGAACCCACCCGGCGCCACGGGACTTTGACGCGTGCTCTGCGCTTGCCATGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS GCA 90 bp GGAGCTGTCAGTCATGAGGACCCAGGGGGTGTCACGGCCTTCCATTaGCCAGAAGGGATCACAAGGTTCCGGGAATGGTCCCGATTTAGC +
Preference number: 5 (lower is better)
Translates to: GAVSHEDPGGVTAFH*PEGITRFREWSRFS
Trigger: GCTAAATCGGGACCATTCCCGGAACCTTGTGATCCCTTCTGGGCAATGGAAGGCCGTGACACCCCCTGGGTCCTCATGACTGACAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464732.1
CDS GCA 90 bp GCTAATGTGCAGGCACCGAGGTGCTTTTCAGCACTGACGAGCGACTaGCAGTATTCGGAGCTGTCAGTCATGAGGACCCAGGGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: ANVQAPRCFSALTSD*QYSELSVMRTQGVS
Trigger: TGACACCCCCTGGGTCCTCATGACTGACAGCTCCGAATACTGGCAGTCGCTCGTCAGTGCTGAAAAGCACCTCGGTGCCTGCACATTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464732.1
CDS-3UTR CAA 90 bp AGTCCTCTGGGTCCAGAGGCTCCAGGACACCTATTACTTTTCCATACTGGCCTGGTGGTGTGCTCCATCTaGCAGGACAAACCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SPLGPEAPGHLLLFHTGLVVCSI*QDKPEP
Trigger: GGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCAC...CAGGCCAGTATGGAAAAGTAATAGGTGTCCTGGAGCCTCTGGACCCAGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS GCA 90 bp TCACCAAGCTGTTCATCTGAATTGGCAACACATTCAATTAGCTCCTaGCGGTGGTCAGTGGCCGCCGCCCTTAATTCAGCTGGAATCTCA +
Preference number: 5 (lower is better)
Translates to: SPSCSSELATHSISS*RWSVAAALNSAGIS
Trigger: TGAGATTCCAGCTGAATTAAGGGCGGCGGCCACTGACCACCGGCAGGAGCTAATTGAATGTGTTGCCAATTCAGATGAACAGCTTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS GCA 90 bp CCGGCATATACTTCTCTGTACTTGCCTCCATCATGTCGGCATGCATaGGAGCCAGCCGTTGCAACCGTACTTTCTTTCTTGTCCTTGTGT +
Preference number: 5 (lower is better)
Translates to: PAYTSLYLPPSCRHA*EPAVATVLSFLSLC
Trigger: ACACAAGGACAAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGCATGCCGACATGATGGAGGCAAGTACAGAGAAGTATATGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS GCA 90 bp GTCTCCGGCATATACTTCTCTGTACTTGCCTCCATCATGTCGGCATaGATGCGAGCCAGCCGTTGCAACCGTACTTTCTTTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: VSGIYFSVLASIMSA*MRASRCNRTFFLVL
Trigger: AAGGACAAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGCATGCCGACATGATGGAGGCAAGTACAGAGAAGTATATGCCGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS CCA 90 bp CATCTGAATTGGCAACACATTCAATTAGCTCCTGCCGGTGGTCAGTaGCCGCCGCCCTTAATTCAGCTGGAATCTCACCATATCGAACAA +
Preference number: 5 (lower is better)
Translates to: HLNWQHIQLAPAGGQ*PPPLIQLESHHIEQ
Trigger: TTGTTCGATATGGTGAGATTCCAGCTGAATTAAGGGCGGCGGCCACTGACCACCGGCAGGAGCTAATTGAATGTGTTGCCAATTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS CCA 90 bp AGCTGTTCATCTGAATTGGCAACACATTCAATTAGCTCCTGCCGGTaGTCAGTGGCCGCCGCCCTTAATTCAGCTGGAATCTCACCATAT +
Preference number: 5 (lower is better)
Translates to: SCSSELATHSISSCR*SVAAALNSAGISPY
Trigger: ATATGGTGAGATTCCAGCTGAATTAAGGGCGGCGGCCACTGACCACCGGCAGGAGCTAATTGAATGTGTTGCCAATTCAGATGAACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS-3UTR CAA 90 bp GAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAATAGGCCGCTGTTGGCTTaGTCTGTGAATGTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: EQEGLLLKKEEPASWAQNRPLLA*SVNVSP
Trigger: TGGAGACACATTCACAGACAAAGCCAACAGCGGCCT...ATTCTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGTGGTGTGCTCCATCTaGCAGGACAAACCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPVVCSI*QDKPEP
Trigger: GGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCAC...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCAGGGCCCTGGCTGGGTaGGAGCCCATTCGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: WNPSKYQNHADSIRVSQLRALAG*EPIRSN
Trigger: ATTGGACCGAATGGGCTCCAACCCAGCCAGGGCCCT...GAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TTATGTGTAAAGTCAAACGGGACAGGGGCAGTAATGGTCTCTCGAAAGGCAACTCATGCGAGCCAGCCGTaGCAACCGTACTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: LCVKSNGTGAVMVSRKATHASQP*QPYFLS
Trigger: AGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATG...AGTTGCCTTTCGAGAGACCATTACTGCCCCTGTCCCGTTTGACTTTACACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR CAA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAAGGGCCCTGGCTGGGTaGGAGCCCATTCGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESRALAG*EPIRSN
Trigger: ATTGGACCGAATGGGCTCCAACCCAGCCAGGGCCCT...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp CCTGGGCTCAGAATTTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCAGTCCTCAACTCCATCTaGCCCAGTGATTACCCCATG +
Preference number: 5 (lower is better)
Translates to: PGLRISCFSSLNLFHWNPVLNSI*PSDYPM
Trigger: CATGGGGTAATCACTGGGCAAGATGGAGTTGAGGAC...TGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAAATTCTGAGCCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGGTGGTGTGTGCCTCTaGTCCCAGCTACTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: CFSSLNLFHWNPSKYQNHGGVCL*SQLLQR
Trigger: CCTCTGGAGTAGCTGGGACAAGAGGCACACACCACC...GTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CAA 90 bp GAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAATACCTGCTATACTCCATaGTGTATTCTCCCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: EQEGLLLKKEEPASWAQNTCYTP*CILPFP
Trigger: AGGGAAAGGGAGAATACACAATGGAGTATAGCAGGT...ATTCTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS GCA 90 bp TTTGTCTGTGAATGTGTCTCCACTAGCACAGTCAATGCCAAACAATaGACAGATGTCTCCGGCATATACTTCTCTGTACTTGCCTCCATC +
Preference number: 5 (lower is better)
Translates to: FVCECVSTSTVNAKQ*TDVSGIYFSVLASI
Trigger: GATGGAGGCAAGTACAGAGAAGTATATGCCGGAGACATCTGTGCATTGTTTGGCATTGACTGTGCTAGTGGAGACACATTCACAGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS CCA 90 bp CCAGCCGTTGCAACCGTACTTTCTTTCTTGTCCTTGTGTTATAGATaGTGTCACCCTTCTTTAGCTCTCCCTGATAACTGCGAACATAAG +
Preference number: 5 (lower is better)
Translates to: PAVATVLSFLSLCYR*CHPSLALPDNCEHK
Trigger: CTTATGTTCGCAGTTATCAGGGAGAGCTAAAGAAGGGTGACACCATCTATAACACAAGGACAAGAAAGAAAGTACGGTTGCAACGGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACCATGCGAGCCAGCCGTaGCAACCGTACTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: YEEHTESTLQQKSLPINDHASQP*QPYFLS
Trigger: AGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATG...GTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp GAATTTCACAGATTTTTCATTTCATGTCTTGGGCTTAAGCGCAGTGCAGGCAATCATGCGAGCCAGCCGTaGCAACCGTACTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: EFHRFFISCLGLKRSAGNHASQP*QPYFLS
Trigger: AGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATG...ATTGCCTGCACTGCGCTTAAGCCCAAGACATGAAATGAAAAATCTGTGAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CAA 90 bp GAATTACCTTTGAATATAACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTGTGGTGTGCTCCATCTaGCAGGACAAACCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: ELPLNITEAPEYEQEGLLVVCSI*QDKPEP
Trigger: GGGCTCCGGTTTGTCCTGCAAGATGGAGCACACCAC...AAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGTTATATTCAAAGGTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TTATGTGTAAAGTCAAACGGGACAGGGGCAGTAATGGTCTCTCGAAAGGCAACTACCTGCTATACTCCATaGTGTATTCTCCCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: LCVKSNGTGAVMVSRKATTCYTP*CILPFP
Trigger: AGGGAAAGGGAGAATACACAATGGAGTATAGCAGGT...AGTTGCCTTTCGAGAGACCATTACTGCCCCTGTCCCGTTTGACTTTACACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS GCA 90 bp TTTGTCTGTGAATGTGTCTCCACTAGCACAGTCAATGCCAAACAATaGACAGATGTCTCCGGCATATACTTCCTCAACATCCTCCATCAT +
Preference number: 5 (lower is better)
Translates to: FVCECVSTSTVNAKQ*TDVSGIYFLNILHH
Trigger: ATGATGGAGGATGTTGAGGAAGTATATGCCGGAGACATCTGTGCATTGTTTGGCATTGACTGTGCTAGTGGAGACACATTCACAGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478576.5
ENST00000486715.6
CDS GCA 90 bp TTTGTCTGTGAATGTGTCTCCACTAGCACAGTCAATGCCAAACAATaGACAGATGTCTCCGGCATATACTTCCTCAACATCTTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: FVCECVSTSTVNAKQ*TDVSGIYFLNILKE
Trigger: CTCCTTCAAGATGTTGAGGAAGTATATGCCGGAGACATCTGTGCATTGTTTGGCATTGACTGTGCTAGTGGAGACACATTCACAGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490261.1
CDS-3UTR CAA 90 bp GAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTGGACTTCAGATGGATTaGGGAGGTATTCTAAAACAG +
Preference number: 5 (lower is better)
Translates to: EYEQEGLLLKKEEPASWAGLQMD*GGILKQ
Trigger: CTGTTTTAGAATACCTCCCAAATCCATCTGAAGTCC...AGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCAGGCCGCTGTTGGCTTaGTCTGTGAATGTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: WNPSKYQNHADSIRVSQLRPLLA*SVNVSP
Trigger: TGGAGACACATTCACAGACAAAGCCAACAGCGGCCT...GAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp GAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAATTTTTCCAGATCGTTCTaGTTAGAAGGCTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: EQEGLLLKKEEPASWAQNFSRSF*LEGFIA
Trigger: AGCAATGAAGCCTTCTAACAAGAACGATCTGGAAAA...ATTCTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp ACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACGTCCTCAACTCCATCTaGCCCAGTGATTACCCCATG +
Preference number: 5 (lower is better)
Translates to: TGIHQSIKTTQIQLESVNVLNSI*PSDYPM
Trigger: CATGGGGTAATCACTGGGCAAGATGGAGTTGAGGAC...GTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp GAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTACCGTACTTTCTTTCTaGTCCTTGTGTTATAGATGG +
Preference number: 5 (lower is better)
Translates to: EYEQEGLLLKKEEPASWATVLSF*SLCYRW
Trigger: CCATCTATAACACAAGGACAAGAAAGAAAGTACGGT...AGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACAATAGAAAGGCCGCTGTaGGCTTTGTCTGTGAATGTG +
Preference number: 5 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTIERPL*ALSVNV
Trigger: CACATTCACAGACAAAGCCAACAGCGGCCTTTCTAT...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGACCTGCCAATACCTTTaGAAAATTTTTCCAGATCGT +
Preference number: 5 (lower is better)
Translates to: YEQEGLLLKKEEPASWAQTCQYL*KIFPDR
Trigger: ACGATCTGGAAAAATTTTCAAAAGGTATTGGCAGGT...CTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp GAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAGAATACTGCTTTGGAATATTaGATCCGAATGTTTCATCTG +
Preference number: 5 (lower is better)
Translates to: EQEGLLLKKEEPASWAQNTALEY*IRMFHL
Trigger: CAGATGAAACATTCGGATCAAATATTCCAAAGCAGT...ATTCTGAGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACTGCATTTGCCAAGGCTaGTTTAAGAGCACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: YEEHTESTLQQKSLPINDCICQG*FKSTFS
Trigger: GGAGAAGGTGCTCTTAAACAAGCCTTGGCAAATGCA...GTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCACCTGCTATACTCCATaGTGTATTCTCCCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPTCYTP*CILPFP
Trigger: AGGGAAAGGGAGAATACACAATGGAGTATAGCAGGT...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000472383.1
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp AGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATAGATGGGATAATTGCTaGAACCCAGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SSLNLFHWNPSKYQNHADRWDNC*NPGSRG
Trigger: ACCTCTGCTTCCTGGGTTCAAGCAATTATCCCATCT...ATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS TCA 90 bp GAAAGTCTAAGAAACTATTACAGCCTAGGAGATCATAAGGAGACATaGCAATCAAATATAACGTGGTCCTCTGGATGGGCCTTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: ESLRNYYSLGDHKET*QSNITWSSGWAFCG
Trigger: ACCACAGAAGGCCCATCCAGAGGACCACGTTATATTTGATTGTCATGTCTCCTTATGATCTCCTAGGCTGTAATAGTTTCTTAGACTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312756.4
CDS TCA 90 bp CACAGGAGCCAACTGAGAGTTCCCAATCGCCAAACCCAGCCAATCTaGACAACAAATGACATACTCAAAGTCATAGTTATAACTCAAAGT +
Preference number: 5 (lower is better)
Translates to: HRSQLRVPNRQTQPI*TTNDILKVIVITQS
Trigger: ACTTTGAGTTATAACTATGACTTTGAGTATGTCATTTGTTGTTCAGATTGGCTGGGTTTGGCGATTGGGAACTCTCAGTTGGCTCCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312756.4
CDS-3UTR CAA 90 bp TATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACTCACCTCATGCATCTTaGCAATTCTGCCAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: YEEHTESTLQQKSLPINDSPHAS*QFCQCS
Trigger: ACTACACTGGCAGAATTGCAAAGATGCATGAGGTGA...GTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TCTCGAAAGGCAACTTTTGGCTTTCCTGTGATACAAGGACAGCCATACTCTCTTAGCTGTTCATCTGAATaGGCAACACATTCAATTAGC +
Preference number: 5 (lower is better)
Translates to: SRKATFGFPVIQGQPYSLSCSSE*ATHSIS
Trigger: GCTAATTGAATGTGTTGCCAATTCAGATGAACAGCT...AAGAGAGTATGGCTGTCCTTGTATCACAGGAAAGCCAAAAGTTGCCTTTCGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR CAA 90 bp GAATTACCTTTGAATATAACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTAGGCCGCTGTTGGCTTaGTCTGTGAATGTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: ELPLNITEAPEYEQEGLLRPLLA*SVNVSP
Trigger: TGGAGACACATTCACAGACAAAGCCAACAGCGGCCT...AAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGTTATATTCAAAGGTAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp ACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACATAGAAAGGCCGCTGTaGGCTTTGTCTGTGAATGTG +
Preference number: 5 (lower is better)
Translates to: TGIHQSIKTTQIQLESVNIERPL*ALSVNV
Trigger: CACATTCACAGACAAAGCCAACAGCGGCCTTTCTAT...GTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp GAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCGCTTCCTGGGCTCAAGAATACATAATGTaGCATTTGCCAAGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: EYEQEGLLLKKEEPASWAQEYIM*HLPRLV
Trigger: AACAAGCCTTGGCAAATGCAACATTATGTATTCTTG...AGCCCAGGAAGCGGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp AGGATAATGGCTTCCAGCTCCATCTATGTCCCTGCAAAGGACTTGATCTCATTCCAAGAATACATAATGTaGCATTTGCCAAGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: RIMASSSIYVPAKDLISFQEYIM*HLPRLV
Trigger: AACAAGCCTTGGCAAATGCAACATTATGTATTCTTG...GAATGAGATCAAGTCCTTTGCAGGGACATAGATGGAGCTGGAAGCCATTATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CAA 90 bp GAATTACCTTTGAATATAACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTGTCCTCAACTCCATCTaGCCCAGTGATTACCCCATG +
Preference number: 5 (lower is better)
Translates to: ELPLNITEAPEYEQEGLLVLNSI*PSDYPM
Trigger: CATGGGGTAATCACTGGGCAAGATGGAGTTGAGGAC...AAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGTTATATTCAAAGGTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp GAATTTCACAGATTTTTCATTTCATGTCTTGGGCTTAAGCGCAGTGCAGGCAATACCTGCTATACTCCATaGTGTATTCTCCCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: EFHRFFISCLGLKRSAGNTCYTP*CILPFP
Trigger: AGGGAAAGGGAGAATACACAATGGAGTATAGCAGGT...ATTGCCTGCACTGCGCTTAAGCCCAAGACATGAAATGAAAAATCTGTGAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS GCA 90 bp TGGTTAATAAAAGCAGGACTGCCAATGACCAAGACTACTTACATCTaGATACAGTGTAAAATAGTCCTCAACTCCATCTTGCCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: WLIKAGLPMTKTTYI*IQCKIVLNSILPSD
Trigger: ATCACTGGGCAAGATGGAGTTGAGGACTATTTTACACTGTATGCAGATGTAAGTAGTCTTGGTCATTGGCAGTCCTGCTTTTATTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477721.1
CDS-3UTR CAA 90 bp CACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAAGTTAGTTCTTGGACAAATGGGTGGGAATaGTCTCTACTGGAGTTCATT +
Preference number: 5 (lower is better)
Translates to: HADSIRVSQLTVSKVSSWTNGWE*SLLEFI
Trigger: AATGAACTCCAGTAGAGACAATTCCCACCCATTTGT...CCAAGAACTAACTTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR CAA 90 bp GAATTTCACAGATTTTTCATTTCATGTCTTGGGCTTAAGCGCAGTGCAGGCAATCAGGCACAAACTGCTTaGGAATATTTGATCCGAATG +
Preference number: 5 (lower is better)
Translates to: EFHRFFISCLGLKRSAGNQAQTA*EYLIRM
Trigger: CATTCGGATCAAATATTCCAAAGCAGTTTGTGCCTG...ATTGCCTGCACTGCGCTTAAGCCCAAGACATGAAATGAAAAATCTGTGAAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CAA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTGCATTTGCCAAGGCTaGTTTAAGAGCACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNCICQG*FKSTFS
Trigger: GGAGAAGGTGCTCTTAAACAAGCCTTGGCAAATGCA...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp AAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAATGCATTTGCCAAGGCTaGTTTAAGAGCACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: KYQNHADSIRVSQLTVSKCICQG*FKSTFS
Trigger: GGAGAAGGTGCTCTTAAACAAGCCTTGGCAAATGCA...TTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTTTTTCATTTCATGTCTaGGGCTTAAGCGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: FHWNPSKYQNHADSIRVSFSFHV*GLSAVQ
Trigger: CTGCACTGCGCTTAAGCCCAAGACATGAAATGAAAA...ACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS GCA 90 bp TTACAAATATTTTTGAGTCCCTATTATGTACTAGGCAGTTACAACTaGCTAGTTGTAACTAGTTGTTCTAGGGGCTGGGACATAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LQIFLSPYYVLGSYN*LVVTSCSRGWDIAV
Trigger: CACTGCTATGTCCCAGCCCCTAGAACAACTAGTTACAACTAGGCAGTTGTAACTGCCTAGTACATAATAGGGACTCAAAAATATTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478251.1
CDS-3UTR CAA 90 bp TATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCATCACCTCATGCATCTTaGCAATTCTGCCAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: YSTGIHQSIKTTQIQLESSPHAS*QFCQCS
Trigger: ACTACACTGGCAGAATTGCAAAGATGCATGAGGTGA...TGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp AATGGTATTGCTGAGTCAGATGGTTTTTGTCTTAGAAGACCCCATCTCTTAAAATCACCTCATGCATCTTaGCAATTCTGCCAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: NGIAESDGFCLRRPHLLKSPHAS*QFCQCS
Trigger: ACTACACTGGCAGAATTGCAAAGATGCATGAGGTGA...TTTTAAGAGATGGGGTCTTCTAAGACAAAAACCATCTGACTCAGCAATACCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS-3UTR CAA 90 bp AGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATAGCTGTTCATCTGAATaGGCAACACATTCAATTAGC +
Preference number: 5 (lower is better)
Translates to: SSLNLFHWNPSKYQNHADSCSSE*ATHSIS
Trigger: GCTAATTGAATGTGTTGCCAATTCAGATGAACAGCT...ATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTGGACTTCAGATGGATTaGGGAGGTATTCTAAAACAG +
Preference number: 5 (lower is better)
Translates to: FHWNPSKYQNHADSIRVSGLQMD*GGILKQ
Trigger: CTGTTTTAGAATACCTCCCAAATCCATCTGAAGTCC...ACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTATAGAAAGGCCGCTGTaGGCTTTGTCTGTGAATGTG +
Preference number: 5 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTIERPL*ALSVNV
Trigger: CACATTCACAGACAAAGCCAACAGCGGCCTTTCTAT...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp ACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTTTGAAGAAAGAAGAGCCCACTGCTTTGGAATATTaGATCCGAATGTTTCATCTG +
Preference number: 5 (lower is better)
Translates to: TEAPEYEQEGLLLKKEEPTALEY*IRMFHL
Trigger: CAGATGAAACATTCGGATCAAATATTCCAAAGCAGT...GGGCTCTTCTTTCTTCAAAAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAGGCACAAACTGCTTaGGAATATTTGATCCGAATG +
Preference number: 5 (lower is better)
Translates to: FHWNPSKYQNHADSIRVSQAQTA*EYLIRM
Trigger: CATTCGGATCAAATATTCCAAAGCAGTTTGTGCCTG...ACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp ACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACCAGGCACAAACTGCTTaGGAATATTTGATCCGAATG +
Preference number: 5 (lower is better)
Translates to: TGIHQSIKTTQIQLESVNQAQTA*EYLIRM
Trigger: CATTCGGATCAAATATTCCAAAGCAGTTTGTGCCTG...GTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp CCTGTAGCTTCCAAATACTTATTAATGACGTCTTCTTGTGTGGATGGTAAACATTCATTTAGAGGGACCTaGTTTAAGAGCACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PVASKYLLMTSSCVDGKHSFRGT*FKSTFS
Trigger: GGAGAAGGTGCTCTTAAACAAGGTCCCTCTAAATGA...ATGTTTACCATCCACACAAGAAGACGTCATTAATAAGTATTTGGAAGCTACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472383.1
CDS-3UTR CAA 90 bp CCTGTAGCTTCCAAATACTTATTAATGACGTCTTCTTGTGTGGATGGTAAACATTATACTTCTCTGTACTaGCCTCCATCATGTCGGCAT +
Preference number: 5 (lower is better)
Translates to: PVASKYLLMTSSCVDGKHYTSLY*PPSCRH
Trigger: ATGCCGACATGATGGAGGCAAGTACAGAGAAGTATA...ATGTTTACCATCCACACAAGAAGACGTCATTAATAAGTATTTGGAAGCTACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR CAA 90 bp TGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACTGCTACAGACTTTGGTaGGTATGTGATCTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: CFSSLNLFHWNPSKYQNHCYRLW*VCDLCQ
Trigger: TTGGCAAAGATCACATACCAACCAAAGTCTGTAGCA...GTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS GCA 90 bp AATTTACTAACCCAAACTGAAGGCCTCCTTCTACCACACCATGCATaGCATAATGTGATATGGGTATATTACCCAAAAAGTAACATAGTC +
Preference number: 5 (lower is better)
Translates to: NLLTQTEGLLLPHHA*HNVIWVYYPKSNIV
Trigger: GACTATGTTACTTTTTGGGTAATATACCCATATCACATTATGGCATGCATGGTGTGGTAGAAGGAGGCCTTCAGTTTGGGTTAGTAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478251.1
CDS-3UTR CAA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATGGACTTCAGATGGATTaGGGAGGTATTCTAAAACAG +
Preference number: 5 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNGLQMD*GGILKQ
Trigger: CTGTTTTAGAATACCTCCCAAATCCATCTGAAGTCC...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATACAAATGGGTGGGAATaGTCTCTACTGGAGTTCATT +
Preference number: 5 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNTNGWE*SLLEFI
Trigger: AATGAACTCCAGTAGAGACAATTCCCACCCATTTGT...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCACCGTACTTTCTTTCTaGTCCTTGTGTTATAGATGG +
Preference number: 5 (lower is better)
Translates to: WNPSKYQNHADSIRVSQLTVLSF*SLCYRW
Trigger: CCATCTATAACACAAGGACAAGAAAGAAAGTACGGT...GAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp ATGAAGAACATACGGAATCCACTCTTCAACAGAAAAGCCTGCCCATTAATGACAAATTCCTGCAATTACTaGTCCCTGAAATTCATTTGG +
Preference number: 5 (lower is better)
Translates to: MKNIRNPLFNRKACPLMTNSCNY*SLKFIW
Trigger: CCAAATGAATTTCAGGGACAAGTAATTGCAGGAATT...TGTCATTAATGGGCAGGCTTTTCTGTTGAAGAGTGGATTCCGTATGTTCTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp CCAAGAAGTGTCATGATATATGCGATTCACTTTCAAGTCTTCAGCAAACTAAAAACAAATGGGTGGGAATaGTCTCTACTGGAGTTCATT +
Preference number: 5 (lower is better)
Translates to: PRSVMIYAIHFQVFSKLKTNGWE*SLLEFI
Trigger: AATGAACTCCAGTAGAGACAATTCCCACCCATTTGT...TTTTAGTTTGCTGAAGACTTGAAAGTGAATCGCATATATCATGACACTTCTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp AAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTCAACTCACAGTAAGCAAATTTTCCAGATCGTTCTaGTTAGAAGGCTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: KYQNHADSIRVSQLTVSKFSRSF*LEGFIA
Trigger: AGCAATGAAGCCTTCTAACAAGAACGATCTGGAAAA...TTTGCTTACTGTGAGTTGACTGACTCTAATTGAATCTGCGTGGTTTTGATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATTAGAGTCAGTGTTGAACAAGTTCTTTaGAAAGTCAGTTGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: FHWNPSKYQNHADSIRVSVEQVL*KVSWKL
Trigger: AAGCTTCCAACTGACTTTCAAAAGAACTTGTTCAAC...ACTGACTCTAATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS TCA 90 bp ACTGAGAGTTCCCAATCGCCAAACCCAGCCAATCTGAACAACAAATaGCATACTCAAAGTCATAGTTATAACTCAAAGTTCAAAATACAT +
Preference number: 5 (lower is better)
Translates to: TESSQSPNPANLNNK*HTQSHSYNSKFKIH
Trigger: ATGTATTTTGAACTTTGAGTTATAACTATGACTTTGAGTATGTCATTTGTTGTTCAGATTGGCTGGGTTTGGCGATTGGGAACTCTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312756.4
CDS-3UTR CAA 90 bp TTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAAAGCTGTTCATCTGAATaGGCAACACATTCAATTAGC +
Preference number: 5 (lower is better)
Translates to: FLFQQPEFIPLESIKVSKSCSSE*ATHSIS
Trigger: GCTAATTGAATGTGTTGCCAATTCAGATGAACAGCT...TTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAAACCGTACTTTCTTTCTaGTCCTTGTGTTATAGATGG +
Preference number: 5 (lower is better)
Translates to: FLFQQPEFIPLESIKVSKTVLSF*SLCYRW
Trigger: CCATCTATAACACAAGGACAAGAAAGAAAGTACGGT...TTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp GCAAGGGTCTACTTTTTACTTCACAATAGACCACAAGGAAGTAATACTTATACTTTTTCCAGATCGTTCTaGTTAGAAGGCTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: ARVYFLLHNRPQGSNTYTFSRSF*LEGFIA
Trigger: AGCAATGAAGCCTTCTAACAAGAACGATCTGGAAAA...AGTATAAGTATTACTTCCTTGTGGTCTATTGTGAAGTAAAAAGTAGACCCTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp CCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAACCACGCAGATTCAATACCTGCCAATACCTTTaGAAAATTTTTCCAGATCGT +
Preference number: 5 (lower is better)
Translates to: PEFIPLESIKVSKPRRFNTCQYL*KIFPDR
Trigger: ACGATCTGGAAAAATTTTCAAAAGGTATTGGCAGGT...ATTGAATCTGCGTGGTTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp CCTGTAGCTTCCAAATACTTATTAATGACGTCTTCTTGTGTGGATGGTAAACATACCTGCCAATACCTTTaGAAAATTTTTCCAGATCGT +
Preference number: 5 (lower is better)
Translates to: PVASKYLLMTSSCVDGKHTCQYL*KIFPDR
Trigger: ACGATCTGGAAAAATTTTCAAAAGGTATTGGCAGGT...ATGTTTACCATCCACACAAGAAGACGTCATTAATAAGTATTTGGAAGCTACAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR CAA 90 bp CCTGTAGCTTCCAAATACTTATTAATGACGTCTTCTTGTGTGGATGGTAAACATAATTCCTGCAATTACTaGTCCCTGAAATTCATTTGG +
Preference number: 5 (lower is better)
Translates to: PVASKYLLMTSSCVDGKHNSCNY*SLKFIW
Trigger: CCAAATGAATTTCAGGGACAAGTAATTGCAGGAATT...ATGTTTACCATCCACACAAGAAGACGTCATTAATAAGTATTTGGAAGCTACAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS-3UTR CAA 90 bp AATGGTATTGCTGAGTCAGATGGTTTTTGTCTTAGAAGACCCCATCTCTTAAAAAATTCCTGCAATTACTaGTCCCTGAAATTCATTTGG +
Preference number: 5 (lower is better)
Translates to: NGIAESDGFCLRRPHLLKNSCNY*SLKFIW
Trigger: CCAAATGAATTTCAGGGACAAGTAATTGCAGGAATT...TTTTAAGAGATGGGGTCTTCTAAGACAAAAACCATCTGACTCAGCAATACCATT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS TCA 90 bp GCATCAAATAATAAACCCAAATTGAGGGACACTCTACAAAAGAGCTaGCCAATACTTCTCAAAAATATCAATCTCGTGAGAAACAAGGAA +
Preference number: 5 (lower is better)
Translates to: ASNNKPKLRDTLQKS*PILLKNINLVRNKE
Trigger: TTCCTTGTTTCTCACGAGATTGATATTTTTGAGAAGTATTGGTCAGCTCTTTTGTAGAGTGTCCCTCAATTTGGGTTTATTATTTGATGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312756.4
CDS-3UTR CAA 90 bp GAATTACCTTTGAATATAACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTACTGCTTTGGAATATTaGATCCGAATGTTTCATCTG +
Preference number: 5 (lower is better)
Translates to: ELPLNITEAPEYEQEGLLTALEY*IRMFHL
Trigger: CAGATGAAACATTCGGATCAAATATTCCAAAGCAGT...AAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGTTATATTCAAAGGTAATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp GAATTACCTTTGAATATAACAGAAGCTCCTGAATATGAACAAGAAGGGCTTCTTCAAGAATACATAATGTaGCATTTGCCAAGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: ELPLNITEAPEYEQEGLLQEYIM*HLPRLV
Trigger: AACAAGCCTTGGCAAATGCAACATTATGTATTCTTG...AAGAAGCCCTTCTTGTTCATATTCAGGAGCTTCTGTTATATTCAAAGGTAATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000486715.6
CDS-3UTR CAA 90 bp TTCTTGTTTCAGCAGCCTGAATTTATTCCACTGGAATCCATCAAAGTATCAAAATTTTCCTATGTTAGTTaGATGAGGATAATGGCTTCC +
Preference number: 5 (lower is better)
Translates to: FLFQQPEFIPLESIKVSKFSYVS*MRIMAS
Trigger: GGAAGCCATTATCCTCATCAAACTAACATAGGAAAA...TTTTGATACTTTGATGGATTCCAGTGGAATAAATTCAGGCTGCTGAAACAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486715.6
CDS CCA 72 bp AGCGCAGAGCACGCGTCAAAGTCCCGTGGCGCCGGGTaGGTTCAGCTGCCGGTAACGCACCGGGAAGCGGTC +
Preference number: 6 (lower is better)
Translates to: SAEHASKSRGAG*VQLPVTHREAV
Trigger: GACCGCTTCCCGGTGCGTTACCGGCAGCTGAACCCACCCGGCGCCACGGGACTTTGACGCGTGCTCTGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS CCA 72 bp CCAGAGCCGCGACGGCTGCAGCTCCCAGGAGTCTCATaGCAAGCGCAGAGCACGCGTCAAAGTCCCGTGGCG +
Preference number: 6 (lower is better)
Translates to: PEPRRLQLPGVS*QAQSTRQSPVA
Trigger: CGCCACGGGACTTTGACGCGTGCTCTGCGCTTGCCATGAGACTCCTGGGAGCTGCAGCCGTCGCGGCTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS CCA 72 bp TCTCATGGCAAGCGCAGAGCACGCGTCAAAGTCCCGTaGCGCCGGGTGGGTTCAGCTGCCGGTAACGCACCG +
Preference number: 6 (lower is better)
Translates to: SHGKRRARVKVP*RRVGSAAGNAP
Trigger: CGGTGCGTTACCGGCAGCTGAACCCACCCGGCGCCACGGGACTTTGACGCGTGCTCTGCGCTTGCCATGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS GCA 72 bp AGTCATGAGGACCCAGGGGGTGTCACGGCCTTCCATTaGCCAGAAGGGATCACAAGGTTCCGGGAATGGTCC +
Preference number: 6 (lower is better)
Translates to: SHEDPGGVTAFH*PEGITRFREWS
Trigger: GGACCATTCCCGGAACCTTGTGATCCCTTCTGGGCAATGGAAGGCCGTGACACCCCCTGGGTCCTCATGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464732.1
CDS GCA 72 bp CAGGCACCGAGGTGCTTTTCAGCACTGACGAGCGACTaGCAGTATTCGGAGCTGTCAGTCATGAGGACCCAG +
Preference number: 6 (lower is better)
Translates to: QAPRCFSALTSD*QYSELSVMRTQ
Trigger: CTGGGTCCTCATGACTGACAGCTCCGAATACTGGCAGTCGCTCGTCAGTGCTGAAAAGCACCTCGGTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464732.1
CDS TCA 72 bp GAGCTAATGTGCAGGCACCGAGGTGCTTTTCAGCACTaGCGAGCGACTGCCAGTATTCGGAGCTGTCAGTCA +
Preference number: 6 (lower is better)
Translates to: ELMCRHRGAFQH*RATASIRSCQS
Trigger: TGACTGACAGCTCCGAATACTGGCAGTCGCTCGTCAGTGCTGAAAAGCACCTCGGTGCCTGCACATTAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464732.1
CDS CCA 72 bp TGGCAACACATTCAATTAGCTCCTGCCGGTGGTCAGTaGCCGCCGCCCTTAATTCAGCTGGAATCTCACCAT +
Preference number: 6 (lower is better)
Translates to: WQHIQLAPAGGQ*PPPLIQLESHH
Trigger: ATGGTGAGATTCCAGCTGAATTAAGGGCGGCGGCCACTGACCACCGGCAGGAGCTAATTGAATGTGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS CCA 72 bp TTCCATTGCCCAGAAGGGATCACAAGGTTCCGGGAATaGTCCCGATTTAGCCTCTCTATGCTCCGGTACCTG +
Preference number: 6 (lower is better)
Translates to: FHCPEGITRFRE*SRFSLSMLRYL
Trigger: CAGGTACCGGAGCATAGAGAGGCTAAATCGGGACCATTCCCGGAACCTTGTGATCCCTTCTGGGCAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464732.1
CDS CCA 72 bp TCTGAATTGGCAACACATTCAATTAGCTCCTGCCGGTaGTCAGTGGCCGCCGCCCTTAATTCAGCTGGAATC +
Preference number: 6 (lower is better)
Translates to: SELATHSISSCR*SVAAALNSAGI
Trigger: GATTCCAGCTGAATTAAGGGCGGCGGCCACTGACCACCGGCAGGAGCTAATTGAATGTGTTGCCAATTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS GCA 72 bp TGTTCATCTGAATTGGCAACACATTCAATTAGCTCCTaGCGGTGGTCAGTGGCCGCCGCCCTTAATTCAGCT +
Preference number: 6 (lower is better)
Translates to: CSSELATHSISS*RWSVAAALNSA
Trigger: AGCTGAATTAAGGGCGGCGGCCACTGACCACCGGCAGGAGCTAATTGAATGTGTTGCCAATTCAGATGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS GCA 72 bp ACTTCTCTGTACTTGCCTCCATCATGTCGGCATGCATaGGAGCCAGCCGTTGCAACCGTACTTTCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: TSLYLPPSCRHA*EPAVATVLSFL
Trigger: CAAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGCATGCCGACATGATGGAGGCAAGTACAGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS CCA 72 bp AAGTGTGGTCTGCAGACCTGTAAGAGCAGCATCAACTaGAAACCTTCCAGAAATGCAAACTACGGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: KCGLQTCKSSIN*KPSRNANYGPH
Trigger: GTGGGGCCCGTAGTTTGCATTTCTGGAAGGTTTCCAGTTGATGCTGCTCTTACAGGTCTGCAGACCACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478251.1
CDS CAA 90 bp TGTCGGCATGCATGCGAGCCAGCCGTTGCAACCGTACTTTCTTTCTaGTCCTTGTGTTATAGATGGTGTCACCCTTCTTTAGCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: CRHACEPAVATVLSF*SLCYRWCHPSLALP
Trigger: AGGGAGAGCTAAAGAAGGGTGACACCATCTATAACACAAGGACAAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGCATGCCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS CAA 90 bp CTCTGTACTTGCCTCCATCATGTCGGCATGCATGCGAGCCAGCCGTaGCAACCGTACTTTCTTTCTTGTCCTTGTGTTATAGATGGTGTC +
Preference number: 6 (lower is better)
Translates to: LCTCLHHVGMHASQP*QPYFLSCPCVIDGV
Trigger: GACACCATCTATAACACAAGGACAAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGCATGCCGACATGATGGAGGCAAGTACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS TCA 72 bp TTAGAAACGGAACGTTGTAGCGCTTCATCTGACGATTaGCAGTCATGGTCTGGCACTGTACCCCTCCAACAG +
Preference number: 6 (lower is better)
Translates to: LETERCSASSDD*QSWSGTVPLQQ
Trigger: CTGTTGGAGGGGTACAGTGCCAGACCATGACTGTCAATCGTCAGATGAAGCGCTACAACGTTCCGTTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS GCA 72 bp ATACTTCCTCAACATCCTCCATCATGTCGGCATGCATaGGAGCCAGCCGTTGCAACCGTACTTTCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: ILPQHPPSCRHA*EPAVATVLSFL
Trigger: CAAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGCATGCCGACATGATGGAGGATGTTGAGGAAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478576.5
ENST00000486715.6
CDS GCA 72 bp GCATATACTTCCTCAACATCCTCCATCATGTCGGCATaGATGCGAGCCAGCCGTTGCAACCGTACTTTCTTT +
Preference number: 6 (lower is better)
Translates to: AYTSSTSSIMSA*MRASRCNRTFF
Trigger: AAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGCATGCCGACATGATGGAGGATGTTGAGGAAGTATATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478576.5
ENST00000486715.6
CDS CAA 72 bp TGCCTCCATCATGTCGGCATGCATGCGAGCCAGCCGTaGCAACCGTACTTTCTTTCTTGTCCTTGTGTTATA +
Preference number: 6 (lower is better)
Translates to: CLHHVGMHASQP*QPYFLSCPCVI
Trigger: TATAACACAAGGACAAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGCATGCCGACATGATGGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS CAA 90 bp TTCCTCAACATCCTCCATCATGTCGGCATGCATGCGAGCCAGCCGTaGCAACCGTACTTTCTTTCTTGTCCTTGTGTTATAGATGGTGTC +
Preference number: 6 (lower is better)
Translates to: FLNILHHVGMHASQP*QPYFLSCPCVIDGV
Trigger: GACACCATCTATAACACAAGGACAAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGCATGCCGACATGATGGAGGATGTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478576.5
ENST00000486715.6
CDS GCA 72 bp ATATACTTCTCTGTACTTGCCTCCATCATGTCGGCATaGATGCGAGCCAGCCGTTGCAACCGTACTTTCTTT +
Preference number: 6 (lower is better)
Translates to: IYFSVLASIMSA*MRASRCNRTFF
Trigger: AAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGCATGCCGACATGATGGAGGCAAGTACAGAGAAGTATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS CAA 72 bp ATCCTCCATCATGTCGGCATGCATGCGAGCCAGCCGTaGCAACCGTACTTTCTTTCTTGTCCTTGTGTTATA +
Preference number: 6 (lower is better)
Translates to: ILHHVGMHASQP*QPYFLSCPCVI
Trigger: TATAACACAAGGACAAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGCATGCCGACATGATGGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264263.9
ENST00000478576.5
ENST00000486715.6
CDS CAA 90 bp CATGCATGCGAGCCAGCCGTTGCAACCGTACTTTCTTTCTTGTCCTaGTGTTATAGATGGTGTCACCCTTCTTTAGCTCTCCCTGATAAC +
Preference number: 6 (lower is better)
Translates to: HACEPAVATVLSFLS*CYRWCHPSLALPDN
Trigger: GTTATCAGGGAGAGCTAAAGAAGGGTGACACCATCTATAACACAAGGACAAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS CCA 72 bp CTTCCAGAAACATCTCACCAAGCTGTTCATCTGAATTaGCAACACATTCAATTAGCTCCTGCCGGTGGTCAG +
Preference number: 6 (lower is better)
Translates to: LPETSHQAVHLN*QHIQLAPAGGQ
Trigger: CTGACCACCGGCAGGAGCTAATTGAATGTGTTGCCAATTCAGATGAACAGCTTGGTGAGATGTTTCTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS CAA 72 bp GCATGCGAGCCAGCCGTTGCAACCGTACTTTCTTTCTaGTCCTTGTGTTATAGATGGTGTCACCCTTCTTTA +
Preference number: 6 (lower is better)
Translates to: ACEPAVATVLSF*SLCYRWCHPSL
Trigger: TAAAGAAGGGTGACACCATCTATAACACAAGGACAAGAAAGAAAGTACGGTTGCAACGGCTGGCTCGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS TCA 72 bp TCCAAACCCATGGGTATCTGCATAAACGCTGCATTATaGTTTAGTTTAGACCTCATTTGCTGCAGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: SKPMGICINAAL*FSLDLICCRAL
Trigger: CAGGGCCCTGCAGCAAATGAGGTCTAAACTAAATCATAATGCAGCGTTTATGCAGATACCCATGGGTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264263.9
ENST00000478251.1
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS TCA 72 bp CTCTGGGTGAAGAAGACTGAAAACAGTGTTGCCTTCTaGGGCTATGATGATCTATCAGGAAAACAGACAGGC +
Preference number: 6 (lower is better)
Translates to: LWVKKTENSVAF*GYDDLSGKQTG
Trigger: GCCTGTCTGTTTTCCTGATAGATCATCATAGCCTCAGAAGGCAACACTGTTTTCAGTCTTCTTCACCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481468.1
CDS GCA 72 bp GAATGTGTCTCCACTAGCACAGTCAATGCCAAACAATaGACAGATGTCTCCGGCATATACTTCCTCAACATC +
Preference number: 6 (lower is better)
Translates to: ECVSTSTVNAKQ*TDVSGIYFLNI
Trigger: GATGTTGAGGAAGTATATGCCGGAGACATCTGTGCATTGTTTGGCATTGACTGTGCTAGTGGAGACACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478576.5
ENST00000486715.6
ENST00000490261.1
CDS CAA 72 bp TCTTCCAGAAACATCTCACCAAGCTGTTCATCTGAATaGGCAACACATTCAATTAGCTCCTGCCGGTGGTCA +
Preference number: 6 (lower is better)
Translates to: SSRNISPSCSSE*ATHSISSCRWS
Trigger: TGACCACCGGCAGGAGCTAATTGAATGTGTTGCCAATTCAGATGAACAGCTTGGTGAGATGTTTCTGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS GCA 72 bp CTAGGGCTGGGGAAGGGGACATGTACATTAAGATGCTaGATCTGTGGTTCTGATGTACAACAAAGTTTAAGA +
Preference number: 6 (lower is better)
Translates to: LGLGKGTCTLRC*ICGSDVQQSLR
Trigger: TCTTAAACTTTGTTGTACATCAGAACCACAGATGCAGCATCTTAATGTACATGTCCCCTTCCCCAGCCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478251.1
CDS GCA 72 bp CGGACCCAGCATACCTTGTTTAAGAGCACCTTCTCCTaGTCGGATGAAAGAGATTTCATTAGAATCAACCAT +
Preference number: 6 (lower is better)
Translates to: RTQHTLFKSTFS*SDERDFIRINH
Trigger: ATGGTTGATTCTAATGAAATCTCTTTCATCCGAGCAGGAGAAGGTGCTCTTAAACAAGGTATGCTGGGTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481468.1
CDS GCA 72 bp GAATGTGTCTCCACTAGCACAGTCAATGCCAAACAATaGACAGATGTCTCCGGCATATACTTCTCTGTACTT +
Preference number: 6 (lower is better)
Translates to: ECVSTSTVNAKQ*TDVSGIYFSVL
Trigger: AAGTACAGAGAAGTATATGCCGGAGACATCTGTGCATTGTTTGGCATTGACTGTGCTAGTGGAGACACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS CCA 72 bp GCAACCGTACTTTCTTTCTTGTCCTTGTGTTATAGATaGTGTCACCCTTCTTTAGCTCTCCCTGATAACTGC +
Preference number: 6 (lower is better)
Translates to: ATVLSFLSLCYR*CHPSLALPDNC
Trigger: GCAGTTATCAGGGAGAGCTAAAGAAGGGTGACACCATCTATAACACAAGGACAAGAAAGAAAGTACGGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS CAA 90 bp ACTACTTACATCTGCATACAGTGTAAAATAGTCCTCAACTCCATCTaGCCCAGTGATTACCCCATGGCGTCGGTTAATTCCTGCAATTAC +
Preference number: 6 (lower is better)
Translates to: TTYICIQCKIVLNSI*PSDYPMASVNSCNY
Trigger: GTAATTGCAGGAATTAACCGACGCCATGGGGTAATCACTGGGCAAGATGGAGTTGAGGACTATTTTACACTGTATGCAGATGTAAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477721.1
CDS GCA 72 bp AGATGGTGTCACCCTTCTTTAGCTCTCCCTGATAACTaGGAACATAAGTTAATTGTCCAAATCGACCTACCT +
Preference number: 6 (lower is better)
Translates to: RWCHPSLALPDN*EHKLIVQIDLP
Trigger: AGGTAGGTCGATTTGGACAATTAACTTATGTTCGCAGTTATCAGGGAGAGCTAAAGAAGGGTGACACCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264263.9
ENST00000478254.5
ENST00000478576.5
ENST00000486715.6
CDS TCA 72 bp GTTCTTCAAGGCGCTTCCCAAAAATACAGGAGTAAATaGTCTTTTCAGAGTAGCTCTTCGAATTGTTGCCTT +
Preference number: 6 (lower is better)
Translates to: VLQGASQKYRSK*SFQSSSSNCCL
Trigger: AAGGCAACAATTCGAAGAGCTACTCTGAAAAGATCATTTACTCCTGTATTTTTGGGAAGCGCCTTGAAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478254.5
CDS GCA 72 bp ATAATAATCTACCTTGATCTCAAGTCCATAAAGATTTaGCCACTACCTACAATATTCCCTGTGGAGCCTAGT +
Preference number: 6 (lower is better)
Translates to: IIIYLDLKSIKI*PLPTIFPVEPS
Trigger: ACTAGGCTCCACAGGGAATATTGTAGGTAGTGGGCAAATCTTTATGGACTTGAGATCAAGGTAGATTATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481468.1
CDS TCA 72 bp AATAAACCCAAATTGAGGGACACTCTACAAAAGAGCTaGCCAATACTTCTCAAAAATATCAATCTCGTGAGA +
Preference number: 6 (lower is better)
Translates to: NKPKLRDTLQKS*PILLKNINLVR
Trigger: TCTCACGAGATTGATATTTTTGAGAAGTATTGGTCAGCTCTTTTGTAGAGTGTCCCTCAATTTGGGTTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312756.4