RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GFI1B (Homo sapiens)

Ensembl gene IDs: ENSG00000165702

Ensembl transcript IDs: ENST00000339463.7, ENST00000372122.4, ENST00000372123.5, ENST00000443690.3, ENST00000524638.1, ENST00000631293.1, ENST00000636137.1, ENST00000636263.1

Found 470 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTaGCCGAAGCAGAGGGGGTGCCAGGCTTCTGACTGGGGTGGGAGG +
Preference number: 1 (lower is better)
Translates to: RPAECWSEVGVSQHI*PKQRGCQASDWGGR
Trigger: CCTCCCACCCCAGTCAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR TCA 90 bp ACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTaGGGCTGGCCTCCAGGTGACAGGACCGCAGGGCAGGCTGGCCAG +
Preference number: 1 (lower is better)
Translates to: TPVQSHLQETGDLGM*GWPPGDRTAGQAGQ
Trigger: CTGGCCAGCCTGCCCTGCGGTCCTGTCACCTGGAGGCCAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR TCA 90 bp CAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTaGGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAA +
Preference number: 1 (lower is better)
Translates to: QPHGLVVELESPEAS*VLVGSRSQPAHLAE
Trigger: TTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR TCA 90 bp TCTGCTAGAGGAAGGCACTTGAGCACACCTGGAAACAACTTCTGCTaGGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGAGAAAT +
Preference number: 1 (lower is better)
Translates to: SARGRHLSTPGNNFC*ERPSQAPTLGSRRN
Trigger: ATTTCTCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTCAAGTGCCTTCCTCTAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR TCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCAGGCTGGCCTCCAGGTaGCAGGACCGCAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGRLASR*QDRRAG
Trigger: GCCTGCCCTGCGGTCCTGTCACCTGGAGGCCAGCCT...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR TCA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAGGCTGGCCTCCAGGTaGCAGGACCGCAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRRLASR*QDRRAG
Trigger: GCCTGCCCTGCGGTCCTGTCACCTGGAGGCCAGCCT...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR-3UTR TCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGAGGCTGGCCTCCAGGTaGCAGGACCGCAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKRLASR*QDRRAG
Trigger: GCCTGCCCTGCGGTCCTGTCACCTGGAGGCCAGCCT...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR-3UTR TCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGGAGATTTGGGCATGTaGGGCTGGCCTCCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQGDLGM*GWPPGD
Trigger: GTCACCTGGAGGCCAGCCTCACATGCCCAAATCTCC...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR TCA 90 bp GAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGAAGGCTGGCCTCCAGGTaGCAGGACCGCAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: ETTSAEKDPARLPHLAAGRLASR*QDRRAG
Trigger: GCCTGCCCTGCGGTCCTGTCACCTGGAGGCCAGCCT...TCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR TCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGGAGATTTGGGCATGTaGGGCTGGCCTCCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASGDLGM*GWPPGD
Trigger: GTCACCTGGAGGCCAGCCTCACATGCCCAAATCTCC...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR TCA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGGGAGATTTGGGCATGTaGGGCTGGCCTCCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRGDLGM*GWPPGD
Trigger: GTCACCTGGAGGCCAGCCTCACATGCCCAAATCTCC...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR-3UTR CCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCCCACCTCCAGGAGACTaGAGATTTGGGCATGTGAGG +
Preference number: 2 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGPPPGD*RFGHVR
Trigger: CCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGG...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR CCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTTGGGCAGCAGGCAGGTaGAGGTTCTGTCTGTGGGTC +
Preference number: 2 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASWAAGR*RFCLWV
Trigger: GACCCACAGACAGAACCTCCACCTGCCTGCTGCCCA...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR TCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGAGGCTGGCCTCCAGGTaGCAGGACCGCAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWRLASR*QDRRAG
Trigger: GCCTGCCCTGCGGTCCTGTCACCTGGAGGCCAGCCT...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTCCACCTCCAGGAGACTaGAGATTTGGGCATGTGAGG +
Preference number: 2 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAPPPGD*RFGHVR
Trigger: CCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGG...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR CCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGCCACCTCCAGGAGACTaGAGATTTGGGCATGTGAGG +
Preference number: 2 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQPPPGD*RFGHVR
Trigger: CCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGG...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR TCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGGAAACAACTTCTGCTaGGAAAGACCCAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQGNNFC*ERPSQA
Trigger: AGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCC...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR CCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCCACCTCCAGGAGACTaGAGATTTGGGCATGTGAGG +
Preference number: 2 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKPPPGD*RFGHVR
Trigger: CCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGG...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR-3UTR TCA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGGGAAACAACTTCTGCTaGGAAAGACCCAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRGNNFC*ERPSQA
Trigger: AGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCC...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR-3UTR TCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGGAAACAACTTCTGCTaGGAAAGACCCAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASGNNFC*ERPSQA
Trigger: AGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCC...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR TCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGGGAGATTTGGGCATGTaGGGCTGGCCTCCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWGDLGM*GWPPGD
Trigger: GTCACCTGGAGGCCAGCCTCACATGCCCAAATCTCC...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR TCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCCACACAGCAATTTCATaGGTCTCAAAACAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: GQLSAGRKSESASTSGRSHTAIS*VSKQAG
Trigger: ACCAGCTTGTTTTGAGACTCATGAAATTGCTGTGTG...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR-3UTR CCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGCCACCTCCAGGAGACTaGAGATTTGGGCATGTGAGG +
Preference number: 2 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQPPPGD*RFGHVR
Trigger: CCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGG...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR TCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCACACAGCAATTTCATaGGTCTCAAAACAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKHTAIS*VSKQAG
Trigger: ACCAGCTTGTTTTGAGACTCATGAAATTGCTGTGTG...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR-3UTR TCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGCACACAGCAATTTCATaGGTCTCAAAACAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: KSESASTSGRSRGGARLLHTAIS*VSKQAG
Trigger: ACCAGCTTGTTTTGAGACTCATGAAATTGCTGTGTG...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR TCA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGCACACAGCAATTTCATaGGTCTCAAAACAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: VSPASRPGCGARIPRGQLHTAIS*VSKQAG
Trigger: ACCAGCTTGTTTTGAGACTCATGAAATTGCTGTGTG...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR CCA 72 bp GAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTaGCCGAAGCAGAGGGGGTGCCAGGCTTCTGACTGG +
Preference number: 3 (lower is better)
Translates to: ECWSEVGVSQHI*PKQRGCQASDW
Trigger: CCAGTCAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR-3UTR CAA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCGCCAGGCTCCCACACTaGGCAGCAGGAGAAATGTTG +
Preference number: 3 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGARLPH*AAGEML
Trigger: CAACATTTCTCCTGCTGCCAAGTGTGGGAGCCTGGC...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR TCA 72 bp GGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTaGGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACAT +
Preference number: 3 (lower is better)
Translates to: GLVVELESPEAS*VLVGSRSQPAH
Trigger: ATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR-3UTR CAA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGGCCAGGCTCCCACACTaGGCAGCAGGAGAAATGTTG +
Preference number: 3 (lower is better)
Translates to: VSPASRPGCGARIPRGQLARLPH*AAGEML
Trigger: CAACATTTCTCCTGCTGCCAAGTGTGGGAGCCTGGC...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
3UTR-3UTR CAA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGCTAGAGGAAGGCACTaGAGCACACCTGGAAACAAC +
Preference number: 3 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAARGRH*STPGNN
Trigger: GTTGTTTCCAGGTGTGCTCAAGTGCCTTCCTCTAGC...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR CAA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGCTAGAGGAAGGCACTaGAGCACACCTGGAAACAAC +
Preference number: 3 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASARGRH*STPGNN
Trigger: GTTGTTTCCAGGTGTGCTCAAGTGCCTTCCTCTAGC...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR TCA 72 bp GGAAGGCACTTGAGCACACCTGGAAACAACTTCTGCTaGGAAAGACCCAGCCAGGCTCCCACACTTGGCAGC +
Preference number: 3 (lower is better)
Translates to: GRHLSTPGNNFC*ERPSQAPTLGS
Trigger: GCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTCAAGTGCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
3UTR-3UTR CAA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGGCTAGAGGAAGGCACTaGAGCACACCTGGAAACAAC +
Preference number: 3 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWARGRH*STPGNN
Trigger: GTTGTTTCCAGGTGTGCTCAAGTGCCTTCCTCTAGC...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGGCTGGCCTCCAGGTaGCAGGACCGCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GQLSAGRKSESASTSGRSRLASR*QDRRAG
Trigger: GCCTGCCCTGCGGTCCTGTCACCTGGAGGCCAGCCT...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR TCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTAGGCTGGCCTCCAGGTaGCAGGACCGCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQARLASR*QDRRAG
Trigger: GCCTGCCCTGCGGTCCTGTCACCTGGAGGCCAGCCT...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCGTGCTCCAGGAAGGCTaGCTGCATGGTGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGVLQEG*LHGGGG
Trigger: GCCCCCTCCACCATGCAGTCAGCCTTCCTGGAGCAC...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGTGCTGGCTCTCGCGGTaGCGCCGCAGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQCWLSR*RRRSTL
Trigger: CAAGGTGGACCTGCGGCGGCACCGCGAGAGCCAGCA...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGCACAATGGGGCCCTCTaGTGCCGGGGCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQHNGAL*CRGHPG
Trigger: GCCAGGATGGCCCCGGCACCAGAGGGCCCCATTGTG...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCGGAAGGCTGACTGCATaGTGGAGGGGGCCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGGRLTA*WRGPAG
Trigger: ACCGGCAGGCCCCCTCCACCATGCAGTCAGCCTTCC...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAGGCTGGCCAGGAGCTaGGAGCCGGCGCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRRLARS*EPAQPH
Trigger: GTGAGGCTGCGCCGGCTCCCAGCTCCTGGCCAGCCT...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGAGGCTGGCCAGGAGCTaGGAGCCGGCGCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLRLARS*EPAQPH
Trigger: GTGAGGCTGCGCCGGCTCCCAGCTCCTGGCCAGCCT...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGTGCAGGCTCAGGACTaGACCCGGCCGGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQVQAQD*TRPGSP
Trigger: AGGGGATCCCGGCCGGGTCCAGTCCTGAGCCTGCAC...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCGACTGCCGTACAGGCTaGCGGAGTGCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGDCRTG*RSAPGR
Trigger: CCTTCCTGGAGCACTCCGTCAGCCTGTACGGCAGTC...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGGGAGTAGCGGAGGCTaGAGTCCAAGGCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAGSSGG*SPRRAQ
Trigger: CTGAGCCCGCCTTGGACTTCAGCCTCCGCTACTCCC...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCCGGCGCAGCCTCACTTaGGATTGTGCTGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGRRSLT*DCAGSR
Trigger: GCGAGAGCCAGCACAATCTCAAGTGAGGCTGCGCCG...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGAATGGGGCCCTCTGGTaGCGGGGCCATCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQNGALW*RGHPGQ
Trigger: TTGGCCAGGATGGCCCCGGCACCAGAGGGCCCCATT...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTAATGGGGCCCTCTGGTaGCGGGGCCATCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQANGALW*RGHPGQ
Trigger: TTGGCCAGGATGGCCCCGGCACCAGAGGGCCCCATT...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCCCAAGGCGGGCTCAGTaGTGGGCACAAGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGPRRAQ*WAQEDC
Trigger: GCAGTCCTCTTGTGCCCAGCACTGAGCCCGCCTTGG...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCGAGTGGACGTGCGTGTaGTGCTCCAGGCTCACAGCG +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGEWTCV*CSRLTA
Trigger: CGCTGTGAGCCTGGAGCAGCACACGCACGTCCACTC...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGTGCTGGCTCTCGCGGTaGCGCCGCAGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLCWLSR*RRRSTL
Trigger: CAAGGTGGACCTGCGGCGGCACCGCGAGAGCCAGCA...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGTCGGGACAGCACAATaGGGCCCTCTGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASVGTAQ*GPLVPG
Trigger: CCCCGGCACCAGAGGGCCCCATTGTGCTGTCCCGAC...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGGTCGGGACAGCACAATaGGGCCCTCTGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKVGTAQ*GPLVPG
Trigger: CCCCGGCACCAGAGGGCCCCATTGTGCTGTCCCGAC...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGGAAGGCTGACTGCATaGTGGAGGGGGCCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAGRLTA*WRGPAG
Trigger: ACCGGCAGGCCCCCTCCACCATGCAGTCAGCCTTCC...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTAGGCTGGCCAGGAGCTaGGAGCCGGCGCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: IPRGQLSAGRKSESASTSRLARS*EPAQPH
Trigger: GTGAGGCTGCGCCGGCTCCCAGCTCCTGGCCAGCCT...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCGGGATCCCCTGGGAGTaGACGTGCGTGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GQLSAGRKSESASTSGRSGIPWE*TCVCCS
Trigger: GGAGCAGCACACGCACGTCCACTCCCAGGGGATCCC...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636137.1
CDS-3UTR TCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTCCGGCTCTCGTTTaGGGTTGGTCCAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQAPALV*GWSSPG
Trigger: GCCTGGACTGGACCAACCTCAAACGAGAGCCGGAGC...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGTGCTCCAGGAAGGCTaGCTGCATGGTGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASVLQEG*LHGGGG
Trigger: GCCCCCTCCACCATGCAGTCAGCCTTCCTGGAGCAC...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGCACTTCGAGCCCGTaGGGGGTGGAGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGCTSSP*GVEKTL
Trigger: CAAGGTCTTCTCCACCCCTCACGGGCTCGAAGTGCA...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGCGGCGCAGCCTCACTTaGGATTGTGCTGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQRRSLT*DCAGSR
Trigger: GCGAGAGCCAGCACAATCTCAAGTGAGGCTGCGCCG...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTTCCCCAGAGGCCAGCTaGGTGCTGGTCGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASSPEAS*VLVGSR
Trigger: CCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGA...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR TCA 90 bp AGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTTCCCCAGAGGCCAGCTaGGTGCTGGTCGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: SAGRKSESASTSGRSRGGSPEAS*VLVGSR
Trigger: CCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGA...ACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCGCCAAGTTCTGGTCCTaGTCCAGCTCCGGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGAKFWS*SSSGSR
Trigger: ACGAGAGCCGGAGCTGGAGCAGGACCAGAACTTGGC...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGAGTGGACGTGCGTGTaGTGCTCCAGGCTCACAGCG +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAEWTCV*CSRLTA
Trigger: CGCTGTGAGCCTGGAGCAGCACACGCACGTCCACTC...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGTGCGGCACTCGAAGCTaGGCTCCTGGGAGTGGACGT +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQCGTRS*APGSGR
Trigger: ACGTCCACTCCCAGGAGCGCAGCTTCGAGTGCCGCA...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339463.7
ENST00000372122.4
CDS-3UTR GCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCGCCGCAGGTCCACCTTaGGCTGGAAGCCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GQLSAGRKSESASTSGRSAAGPP*AGSLWC
Trigger: GCACCAAAGGCTTCCAGCGCAAGGTGGACCTGCGGC...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCCAGAGGCCAGCTGAGTaGTGGTCGGAAGTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGQRPAE*WSEVGV
Trigger: GACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTG...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGCGGCACTCGAAGCTaGGCTCCTGCCGGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGCGTRS*APAGGN
Trigger: ATTTCCTCCGGCAGGAGCGCAGCTTCGAGTGCCGCA...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGGAGCTGTCCCTCGCCTaGGTTCTGCCGGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLELSLA*VLPELP
Trigger: GGGAAGCTCCGGCAGAACCCAGGCGAGGGACAGCTC...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGTGCCGGGGCCATCCTaGCCAAGTTCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQVPGPS*PSSGPA
Trigger: AGCAGGACCAGAACTTGGCCAGGATGGCCCCGGCAC...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGTGCCGGGGCCATCCTaGCCAAGTTCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAVPGPS*PSSGPA
Trigger: AGCAGGACCAGAACTTGGCCAGGATGGCCCCGGCAC...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTCACAATGGGGCCCTCTaGTGCCGGGGCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: IPRGQLSAGRKSESASTSHNGAL*CRGHPG
Trigger: GCCAGGATGGCCCCGGCACCAGAGGGCCCCATTGTG...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCGGAGAGTCCCCATCCTaGGGTCGGGACAGCACAATG +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGGESPS*GRDSTM
Trigger: CATTGTGCTGTCCCGACCCCAGGATGGGGACTCTCC...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGGGAAGGCTGACTGCATaGTGGAGGGGGCCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKGRLTA*WRGPAG
Trigger: ACCGGCAGGCCCCCTCCACCATGCAGTCAGCCTTCC...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCTGCGCTCCTGGGAGTaGACGTGCGTGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKLRSWE*TCVCCS
Trigger: GGAGCAGCACACGCACGTCCACTCCCAGGAGCGCAG...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339463.7
ENST00000372122.4
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCGAAGCTGCGCTCCTaGGAGTGGACGTGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQASKLRS*EWTCVC
Trigger: GCACACGCACGTCCACTCCCAGGAGCGCAGCTTCGA...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339463.7
ENST00000372122.4
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGGCCGCGTGTCTGAGTaGATGAGCAGGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAGRVSE*MSRWVD
Trigger: GTCCACCCACCTGCTCATCCACTCAGACACGCGGCC...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGGCCGCGTGTCTGAGTaGATGAGCAGGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQGRVSE*MSRWVD
Trigger: GTCCACCCACCTGCTCATCCACTCAGACACGCGGCC...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGGGCAGCAGGCAGGTaGAGGTTCTGTCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGWAAGR*RFCLWV
Trigger: GACCCACAGACAGAACCTCCACCTGCCTGCTGCCCA...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGTCAGCCAGCACATCTaGCCGAAGCAGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAVSQHI*PKQRGC
Trigger: GCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGAC...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGTCAGCCAGCACATCTaGCCGAAGCAGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQVSQHI*PKQRGC
Trigger: GCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGAC...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCGTCAGCCAGCACATCTaGCCGAAGCAGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GQLSAGRKSESASTSGRSVSQHI*PKQRGC
Trigger: GCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGAC...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGGGGGCGGCCTGGGAGTaGACGTGCGTGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLGAAWE*TCVCCS
Trigger: GGAGCAGCACACGCACGTCCACTCCCAGGCCGCCCC...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636263.1
CDS-3UTR TCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGGTAGGGCCGCGTGTCTaGGTGGATGAGCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKVGPRV*VDEQVG
Trigger: ACCCACCTGCTCATCCACTCAGACACGCGGCCCTAC...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR TCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGTAGGGCCGCGTGTCTaGGTGGATGAGCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASVGPRV*VDEQVG
Trigger: ACCCACCTGCTCATCCACTCAGACACGCGGCCCTAC...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGAGGCTGGCCTCCAGGTaGCAGGACCGCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACERLASR*QDRRAG
Trigger: GCCTGCCCTGCGGTCCTGTCACCTGGAGGCCAGCCT...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGGCCTCCAGGTaGCAGGACCGCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVRLASR*QDRRAG
Trigger: GCCTGCCCTGCGGTCCTGTCACCTGGAGGCCAGCCT...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCGCCAAGTTCTGGTCCTaGTCCAGCTCCGGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: GQLSAGRKSESASTSGRSAKFWS*SSSGSR
Trigger: ACGAGAGCCGGAGCTGGAGCAGGACCAGAACTTGGC...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGTCCAGGAAGGCTGACTaGATGGTGGAGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLSRKAD*MVEGAC
Trigger: GCAGGCCCCCTCCACCATGCAGTCAGCCTTCCTGGA...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGTGGTACGCATCCATaGCTGGGGAGTAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQLSAGRKSESASTSGRSSGTHP*LGSSGG
Trigger: GCCTCCGCTACTCCCCAGGCATGGATGCGTACCACT...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp AGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGAGTGGACGTGCGTGTaGTGCTCCAGGCTCACAGCG +
Preference number: 4 (lower is better)
Translates to: SAGRKSESASTSGRSRGGEWTCV*CSRLTA
Trigger: CGCTGTGAGCCTGGAGCAGCACACGCACGTCCACTC...ACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
CDS-3UTR GCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTCTGGTGGAAACGCTTaGCGCAGAACTGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGSGGNA*RRTGRG
Trigger: ACCCCTGCCAGTTCTGCGGCAAGCGTTTCCACCAGA...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGGCCGCAGGTCCACCTTaGGCTGGAAGCCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKAAGPP*AGSLWC
Trigger: GCACCAAAGGCTTCCAGCGCAAGGTGGACCTGCGGC...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGCCGAAGCAGAGGGGGTaGCAGGCTTCTGACTGGGGT +
Preference number: 4 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRPKQRG*QASDWG
Trigger: ACCCCAGTCAGAAGCCTGGCACCCCCTCTGCTTCGG...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTCTGTTGCTTGGAGCCTaGTCTCTGGGCACCGGGGTA +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQALLLGA*SLGTGV
Trigger: TACCCCGGTGCCCAGAGACCAGGCTCCAAGCAACAG...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGTGCCGGGGCCATCCTaGCCAAGTTCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASVPGPS*PSSGPA
Trigger: AGCAGGACCAGAACTTGGCCAGGATGGCCCCGGCAC...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCGGAGAGTCCCCATCCTaGGGTCGGGACAGCACAATG +
Preference number: 4 (lower is better)
Translates to: GQLSAGRKSESASTSGRSGESPS*GRDSTM
Trigger: CATTGTGCTGTCCCGACCCCAGGATGGGGACTCTCC...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGGAGAGTCCCCATCCTaGGGTCGGGACAGCACAATG +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQGESPS*GRDSTM
Trigger: CATTGTGCTGTCCCGACCCCAGGATGGGGACTCTCC...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCCGAGCCCGTGAGGGGTaGAGAAGACCTTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGRAREG*RRPCCT
Trigger: AGTGCAACAAGGTCTTCTCCACCCCTCACGGGCTCG...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGGGCCGGGTCCCACTATaGGAGCGTCGCACATGCACT +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLGRVPL*ERRTCT
Trigger: AGTGCATGTGCGACGCTCCCATAGTGGGACCCGGCC...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGGGCCGGGTCCCACTATaGGAGCGTCGCACATGCACT +
Preference number: 4 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRGRVPL*ERRTCT
Trigger: AGTGCATGTGCGACGCTCCCATAGTGGGACCCGGCC...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
CDS-3UTR CCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGGCCGGGTCCCACTATaGGAGCGTCGCACATGCACT +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASGRVPL*ERRTCT
Trigger: AGTGCATGTGCGACGCTCCCATAGTGGGACCCGGCC...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGCACTTGAGATTGTGCTaGCTCTCGCGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLHLRLC*LSRCRR
Trigger: GCGGCGGCACCGCGAGAGCCAGCACAATCTCAAGTG...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTCACTTGAGATTGTGCTaGCTCTCGCGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASHLRLC*LSRCRR
Trigger: GCGGCGGCACCGCGAGAGCCAGCACAATCTCAAGTG...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGAGGCTGGCCAGGAGCTaGGAGCCGGCGCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACERLARS*EPAQPH
Trigger: GTGAGGCTGCGCCGGCTCCCAGCTCCTGGCCAGCCT...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGGCCAGGAGCTaGGAGCCGGCGCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVRLARS*EPAQPH
Trigger: GTGAGGCTGCGCCGGCTCCCAGCTCCTGGCCAGCCT...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTGGGCAGCAGGCAGGTaGAGGTTCTGTCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAWAAGR*RFCLWV
Trigger: GACCCACAGACAGAACCTCCACCTGCCTGCTGCCCA...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGTCAGCCAGCACATCTaGCCGAAGCAGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SAGRKSESASTSGRSRGGVSQHI*PKQRGC
Trigger: GCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGAC...ACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGAGGCCAGCTGAGTGCTaGTCGGAAGTCGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQRPAEC*SEVGVS
Trigger: GCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTAACAGGACACTCCATTaGGGCGGCCTGGGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQANRTLH*GGLGVD
Trigger: GTCCACTCCCAGGCCGCCCCAATGGAGTGTCCTGTT...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636263.1
CDS-3UTR TCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGGTGCTCCAGGAAGGCTaGCTGCATGGTGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLVLQEG*LHGGGG
Trigger: GCCCCCTCCACCATGCAGTCAGCCTTCCTGGAGCAC...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGACTGCCGTACAGGCTaGCGGAGTGCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: IPRGQLSAGRKSESASTSDCRTG*RSAPGR
Trigger: CCTTCCTGGAGCACTCCGTCAGCCTGTACGGCAGTC...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR TCA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGTGCACTTCGAGCCCGTaGGGGGTGGAGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRCTSSP*GVEKTL
Trigger: CAAGGTCTTCTCCACCCCTCACGGGCTCGAAGTGCA...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
CDS-3UTR TCA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGGTAGGGCCGCGTGTCTaGGTGGATGAGCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: VSPASRPGCGARIPRGQLVGPRV*VDEQVG
Trigger: ACCCACCTGCTCATCCACTCAGACACGCGGCCCTAC...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR TCA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGTAGGGCCGCGTGTCTaGGTGGATGAGCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: IPRGQLSAGRKSESASTSVGPRV*VDEQVG
Trigger: ACCCACCTGCTCATCCACTCAGACACGCGGCCCTAC...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGTCCCGAGGTGGGAACTaGAAAGCCTCTCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQSRGGN*KASLGT
Trigger: AGTCCCGAGAGAGGCTTTGCAGTTCCCACCTCGGGA...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGCCCTCGCCTGGGTTCTaGCGGAGCTTCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACEPSPGF*RSFPRW
Trigger: CCACCTCGGGAAGCTCCGGCAGAACCCAGGCGAGGG...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGCCAAGTTCTGGTCCTaGTCCAGCTCCGGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASAKFWS*SSSGSR
Trigger: ACGAGAGCCGGAGCTGGAGCAGGACCAGAACTTGGC...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAAGTTCTGGTCCTaGTCCAGCTCCGGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: SAGRKSESASTSGRSRGGAKFWS*SSSGSR
Trigger: ACGAGAGCCGGAGCTGGAGCAGGACCAGAACTTGGC...ACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTACAGGCTGACGGAGTaGTCCAGGAAGGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAYRLTE*SRKADC
Trigger: GCAGTCAGCCTTCCTGGAGCACTCCGTCAGCCTGTA...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCTACAGGCTGACGGAGTaGTCCAGGAAGGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: GQLSAGRKSESASTSGRSYRLTE*SRKADC
Trigger: GCAGTCAGCCTTCCTGGAGCACTCCGTCAGCCTGTA...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTCGTGGCCGAAGGTTTTaGCGCAGATGTCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQARGRRF*RRCHRR
Trigger: TCGCCTGTGACATCTGCGGCAAAACCTTCGGCCACG...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGCCGAAGCAGAGGGGGTaGCAGGCTTCTGACTGGGGT +
Preference number: 4 (lower is better)
Translates to: VSPASRPGCGARIPRGQLPKQRG*QASDWG
Trigger: ACCCCAGTCAGAAGCCTGGCACCCCCTCTGCTTCGG...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTCGGAGCTTCCCGAGGTaGGAACTGCAAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQARSFPR*ELQSLS
Trigger: AGAGAGGCTTTGCAGTTCCCACCTCGGGAAGCTCCG...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCCGGAGCTTCCCGAGGTaGGAACTGCAAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GQLSAGRKSESASTSGRSRSFPR*ELQSLS
Trigger: AGAGAGGCTTTGCAGTTCCCACCTCGGGAAGCTCCG...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCCACCAGGAAGGAGCGTaGCATTTTCAGTGTGCACCC +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGHQEGA*HFQCAP
Trigger: GGGTGCACACTGAAAATGCCACGCTCCTTCCTGGTG...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGGACAGGGCTGTTGCTTaGAGCCTGGTCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKDRAVA*SLVSGH
Trigger: GTGCCCAGAGACCAGGCTCCAAGCAACAGCCCTGTC...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGGACAGGGCTGTTGCTTaGAGCCTGGTCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLDRAVA*SLVSGH
Trigger: GTGCCCAGAGACCAGGCTCCAAGCAACAGCCCTGTC...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGCACAATGGGGCCCTCTaGTGCCGGGGCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVHNGAL*CRGHPG
Trigger: GCCAGGATGGCCCCGGCACCAGAGGGCCCCATTGTG...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGCACAATGGGGCCCTCTaGTGCCGGGGCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACEHNGAL*CRGHPG
Trigger: GCCAGGATGGCCCCGGCACCAGAGGGCCCCATTGTG...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGGTCGGGACAGCACAATaGGGCCCTCTGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVVGTAQ*GPLVPG
Trigger: CCCCGGCACCAGAGGGCCCCATTGTGCTGTCCCGAC...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGTCGGGACAGCACAATaGGGCCCTCTGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACEVGTAQ*GPLVPG
Trigger: CCCCGGCACCAGAGGGCCCCATTGTGCTGTCCCGAC...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGGGAGAGTCCCCATCCTaGGGTCGGGACAGCACAATG +
Preference number: 4 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKGESPS*GRDSTM
Trigger: CATTGTGCTGTCCCGACCCCAGGATGGGGACTCTCC...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGTGGGCAGCAGGCAGGTaGAGGTTCTGTCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLWAAGR*RFCLWV
Trigger: GACCCACAGACAGAACCTCCACCTGCCTGCTGCCCA...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGAGGCCAGCTGAGTGCTaGTCGGAAGTCGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLRPAEC*SEVGVS
Trigger: GCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTCCGGCCGGGATCCCCTaGGAGTGGACGTGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTPAGIP*EWTCVC
Trigger: GCACACGCACGTCCACTCCCAGGGGATCCCGGCCGG...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636137.1
CDS-3UTR TCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGGGGAGTAGCGGAGGCTaGAGTCCAAGGCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVGSSGG*SPRRAQ
Trigger: CTGAGCCCGCCTTGGACTTCAGCCTCCGCTACTCCC...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGGGAGATTTGGGCATGTaGGGCTGGCCTCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VSPASRPGCGARIPRGQLGDLGM*GWPPGD
Trigger: GTCACCTGGAGGCCAGCCTCACATGCCCAAATCTCC...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp AGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTTCCCGAGGTGGGAACTaGAAAGCCTCTCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: SAGRKSESASTSGRSRGGSRGGN*KASLGT
Trigger: AGTCCCGAGAGAGGCTTTGCAGTTCCCACCTCGGGA...ACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTTCCCGAGGTGGGAACTaGAAAGCCTCTCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASSRGGN*KASLGT
Trigger: AGTCCCGAGAGAGGCTTTGCAGTTCCCACCTCGGGA...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGCCCTCGCCTGGGTTCTaGCGGAGCTTCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWPSPGF*RSFPRW
Trigger: CCACCTCGGGAAGCTCCGGCAGAACCCAGGCGAGGG...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTCCCTCGCCTGGGTTCTaGCGGAGCTTCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTPSPGF*RSFPRW
Trigger: CCACCTCGGGAAGCTCCGGCAGAACCCAGGCGAGGG...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGTGGCATTTTCAGTGTaGACCCCACACCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQVAFSV*TPHLSG
Trigger: TCCGGACAGGTGTGGGGTGCACACTGAAAATGCCAC...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGTGGCATTTTCAGTGTaGACCCCACACCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAVAFSV*TPHLSG
Trigger: TCCGGACAGGTGTGGGGTGCACACTGAAAATGCCAC...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGAATGGGGCCCTCTGGTaGCGGGGCCATCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACENGALW*RGHPGQ
Trigger: TTGGCCAGGATGGCCCCGGCACCAGAGGGCCCCATT...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGTCCAGGAAGGCTGACTaGATGGTGGAGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLSRKAD*MVEGAC
Trigger: GCAGGCCCCCTCCACCATGCAGTCAGCCTTCCTGGA...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGCGTGGCCGAAGGTTTTaGCGCAGATGTCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLRGRRF*RRCHRR
Trigger: TCGCCTGTGACATCTGCGGCAAAACCTTCGGCCACG...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTCGTGGCCGAAGGTTTTaGCGCAGATGTCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: SAGRKSESASTSGRSRGGRGRRF*RRCHRR
Trigger: TCGCCTGTGACATCTGCGGCAAAACCTTCGGCCACG...ACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
CDS-3UTR GCA 90 bp AGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTTCTGGTGGAAACGCTTaGCGCAGAACTGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SAGRKSESASTSGRSRGGSGGNA*RRTGRG
Trigger: ACCCCTGCCAGTTCTGCGGCAAGCGTTTCCACCAGA...ACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGTCTGGTGGAAACGCTTaGCGCAGAACTGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLSGGNA*RRTGRG
Trigger: ACCCCTGCCAGTTCTGCGGCAAGCGTTTCCACCAGA...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGTGCTGGCTCTCGCGGTaGCGCCGCAGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQCWLSR*RRRSTL
Trigger: CAAGGTGGACCTGCGGCGGCACCGCGAGAGCCAGCA...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGCCGAAGCAGAGGGGGTaGCAGGCTTCTGACTGGGGT +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLPKQRG*QASDWG
Trigger: ACCCCAGTCAGAAGCCTGGCACCCCCTCTGCTTCGG...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTCAGAGGCCAGCTGAGTaGTGGTCGGAAGTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: IPRGQLSAGRKSESASTSQRPAE*WSEVGV
Trigger: GACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTG...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAGCCTCTCTCGGGACTaGCCTCCACTCTGTCAACTG +
Preference number: 4 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRSLSRD*PPLCQL
Trigger: CAGTTGACAGAGTGGAGGCCAGTCCCGAGAGAGGCT...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGAGCTGTCCCTCGCCTaGGTTCTGCCGGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACEELSLA*VLPELP
Trigger: GGGAAGCTCCGGCAGAACCCAGGCGAGGGACAGCTC...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCCACCAGGAAGGAGCGTaGCATTTTCAGTGTGCACCC +
Preference number: 4 (lower is better)
Translates to: GQLSAGRKSESASTSGRSHQEGA*HFQCAP
Trigger: GGGTGCACACTGAAAATGCCACGCTCCTTCCTGGTG...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTCACCAGGAAGGAGCGTaGCATTTTCAGTGTGCACCC +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAHQEGA*HFQCAP
Trigger: GGGTGCACACTGAAAATGCCACGCTCCTTCCTGGTG...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGGACAGGGCTGTTGCTTaGAGCCTGGTCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VSPASRPGCGARIPRGQLDRAVA*SLVSGH
Trigger: GTGCCCAGAGACCAGGCTCCAAGCAACAGCCCTGTC...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGGTGCCGGGGCCATCCTaGCCAAGTTCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLVPGPS*PSSGPA
Trigger: AGCAGGACCAGAACTTGGCCAGGATGGCCCCGGCAC...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTCACAATGGGGCCCTCTaGTGCCGGGGCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTHNGAL*CRGHPG
Trigger: GCCAGGATGGCCCCGGCACCAGAGGGCCCCATTGTG...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTGTCGGGACAGCACAATaGGGCCCTCTGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTVGTAQ*GPLVPG
Trigger: CCCCGGCACCAGAGGGCCCCATTGTGCTGTCCCGAC...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGAGAGTCCCCATCCTaGGGTCGGGACAGCACAATG +
Preference number: 4 (lower is better)
Translates to: IPRGQLSAGRKSESASTSGESPS*GRDSTM
Trigger: CATTGTGCTGTCCCGACCCCAGGATGGGGACTCTCC...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGGTACGCATCCATGCCTaGGGAGTAGCGGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRVRIHA*GVAEAE
Trigger: TTCAGCCTCCGCTACTCCCCAGGCATGGATGCGTAC...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGCTGCGCTCCTGGGAGTaGACGTGCGTGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVLRSWE*TCVCCS
Trigger: GGAGCAGCACACGCACGTCCACTCCCAGGAGCGCAG...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339463.7
ENST00000372122.4
CDS-3UTR CCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGGGCCGCGTGTCTGAGTaGATGAGCAGGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLGRVSE*MSRWVD
Trigger: GTCCACCCACCTGCTCATCCACTCAGACACGCGGCC...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCATGTCGGACTTCTGGTaGAAACGCTTGCCGCAGAAC +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGMSDFW*KRLPQN
Trigger: GTTCTGCGGCAAGCGTTTCCACCAGAAGTCCGACAT...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGCACTTGAGATTGTGCTaGCTCTCGCGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLHLRLC*LSRCRR
Trigger: GCGGCGGCACCGCGAGAGCCAGCACAATCTCAAGTG...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGGTGCAGGCTCAGGACTaGACCCGGCCGGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWVQAQD*TRPGSP
Trigger: AGGGGATCCCGGCCGGGTCCAGTCCTGAGCCTGCAC...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTCCGGCTCTCGTTTaGGGTTGGTCCAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACEAPALV*GWSSPG
Trigger: GCCTGGACTGGACCAACCTCAAACGAGAGCCGGAGC...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGTGCTCCAGGAAGGCTaGCTGCATGGTGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQVLQEG*LHGGGG
Trigger: GCCCCCTCCACCATGCAGTCAGCCTTCCTGGAGCAC...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTGTGCTCCAGGAAGGCTaGCTGCATGGTGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTVLQEG*LHGGGG
Trigger: GCCCCCTCCACCATGCAGTCAGCCTTCCTGGAGCAC...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGGACTGCCGTACAGGCTaGCGGAGTGCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVDCRTG*RSAPGR
Trigger: CCTTCCTGGAGCACTCCGTCAGCCTGTACGGCAGTC...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGGGAGTAGCGGAGGCTaGAGTCCAAGGCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQGSSGG*SPRRAQ
Trigger: CTGAGCCCGCCTTGGACTTCAGCCTCCGCTACTCCC...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGGGAGATTTGGGCATGTaGGGCTGGCCTCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLGDLGM*GWPPGD
Trigger: GTCACCTGGAGGCCAGCCTCACATGCCCAAATCTCC...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCGGAAACAACTTCTGCTaGGAAAGACCCAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GQLSAGRKSESASTSGRSGNNFC*ERPSQA
Trigger: AGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCC...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR TCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGTCCCCAGAGGCCAGCTaGGTGCTGGTCGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQSPEAS*VLVGSR
Trigger: CCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGA...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGGTGGCATTTTCAGTGTaGACCCCACACCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKVAFSV*TPHLSG
Trigger: TCCGGACAGGTGTGGGGTGCACACTGAAAATGCCAC...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGAGGTGTGAGCCTTCTTaGTCTTCACCAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQRCEPS*SSPGRS
Trigger: GCTCCTTCCTGGTGAAGAGCAAGAAGGCTCACACCT...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGAATGGGGCCCTCTGGTaGCGGGGCCATCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWNGALW*RGHPGQ
Trigger: TTGGCCAGGATGGCCCCGGCACCAGAGGGCCCCATT...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGTCCAGGAAGGCTGACTaGATGGTGGAGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVSRKAD*MVEGAC
Trigger: GCAGGCCCCCTCCACCATGCAGTCAGCCTTCCTGGA...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGCCAAGGCGGGCTCAGTaGTGGGCACAAGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVPRRAQ*WAQEDC
Trigger: GCAGTCCTCTTGTGCCCAGCACTGAGCCCGCCTTGG...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGCCAAGGCGGGCTCAGTaGTGGGCACAAGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACEPRRAQ*WAQEDC
Trigger: GCAGTCCTCTTGTGCCCAGCACTGAGCCCGCCTTGG...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGAGTGGTACGCATCCATaGCTGGGGAGTAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLSGTHP*LGSSGG
Trigger: GCCTCCGCTACTCCCCAGGCATGGATGCGTACCACT...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTTCTGGTGGAAACGCTTaGCGCAGAACTGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: IPRGQLSAGRKSESASTSSGGNA*RRTGRG
Trigger: ACCCCTGCCAGTTCTGCGGCAAGCGTTTCCACCAGA...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGGCCGCAGGTCCACCTTaGGCTGGAAGCCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVAAGPP*AGSLWC
Trigger: GCACCAAAGGCTTCCAGCGCAAGGTGGACCTGCGGC...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGTGCTGGCTCTCGCGGTaGCGCCGCAGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWCWLSR*RRRSTL
Trigger: CAAGGTGGACCTGCGGCGGCACCGCGAGAGCCAGCA...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGCCGAAGCAGAGGGGGTaGCAGGCTTCTGACTGGGGT +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVPKQRG*QASDWG
Trigger: ACCCCAGTCAGAAGCCTGGCACCCCCTCTGCTTCGG...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGCAGAGGCCAGCTGAGTaGTGGTCGGAAGTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLQRPAE*WSEVGV
Trigger: GACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTG...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGCGGAGCTTCCCGAGGTaGGAACTGCAAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: VSPASRPGCGARIPRGQLRSFPR*ELQSLS
Trigger: AGAGAGGCTTTGCAGTTCCCACCTCGGGAAGCTCCG...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGGACAGGGCTGTTGCTTaGAGCCTGGTCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLDRAVA*SLVSGH
Trigger: GTGCCCAGAGACCAGGCTCCAAGCAACAGCCCTGTC...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGGTGCCGGGGCCATCCTaGCCAAGTTCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVVPGPS*PSSGPA
Trigger: AGCAGGACCAGAACTTGGCCAGGATGGCCCCGGCAC...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTTGTGGCCATAGGTTGTaGCCAAGGTGTCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASCGHRL*PRCPRR
Trigger: TCTCCTGGGACACCTTGGCCACAACCTATGGCCACA...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGTGTGGCCATAGGTTGTaGCCAAGGTGTCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKCGHRL*PRCPRR
Trigger: TCTCCTGGGACACCTTGGCCACAACCTATGGCCACA...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGGGAAGGCTGACTGCATaGTGGAGGGGGCCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWGRLTA*WRGPAG
Trigger: ACCGGCAGGCCCCCTCCACCATGCAGTCAGCCTTCC...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGTACGCATCCATGCCTaGGGAGTAGCGGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: IPRGQLSAGRKSESASTSVRIHA*GVAEAE
Trigger: TTCAGCCTCCGCTACTCCCCAGGCATGGATGCGTAC...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGTTGCACTTCACACAGTaGTACGCATCCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQLHFTQ*YASMPG
Trigger: CCCAGGCATGGATGCGTACCACTGTGTGAAGTGCAA...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTTGCACTTCACACAGTaGTACGCATCCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQALHFTQ*YASMPG
Trigger: CCCAGGCATGGATGCGTACCACTGTGTGAAGTGCAA...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGCGAGCCCGTGAGGGGTaGAGAAGACCTTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: VSPASRPGCGARIPRGQLRAREG*RRPCCT
Trigger: AGTGCAACAAGGTCTTCTCCACCCCTCACGGGCTCG...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTTCATGTCGGACTTCTaGTGGAAACGCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAFMSDF*WKRLPQ
Trigger: CTGCGGCAAGCGTTTCCACCAGAAGTCCGACATGAA...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTCCACCTCCAGGAGACTaGAGATTTGGGCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: SAGRKSESASTSGRSRGGPPPGD*RFGHVR
Trigger: CCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGG...ACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTCCATTGGGGCGGCCTaGGAGTGGACGTGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTSIGAA*EWTCVC
Trigger: GCACACGCACGTCCACTCCCAGGCCGCCCCAATGGA...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636263.1
CDS-3UTR TCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGGCTCCGGCTCTCGTTTaGGGTTGGTCCAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWAPALV*GWSSPG
Trigger: GCCTGGACTGGACCAACCTCAAACGAGAGCCGGAGC...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGACTGCCGTACAGGCTaGCGGAGTGCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQDCRTG*RSAPGR
Trigger: CCTTCCTGGAGCACTCCGTCAGCCTGTACGGCAGTC...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGGGAGTAGCGGAGGCTaGAGTCCAAGGCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWGSSGG*SPRRAQ
Trigger: CTGAGCCCGCCTTGGACTTCAGCCTCCGCTACTCCC...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGTGCACTTCGAGCCCGTaGGGGGTGGAGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACECTSSP*GVEKTL
Trigger: CAAGGTCTTCTCCACCCCTCACGGGCTCGAAGTGCA...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGGTAGGGCCGCGTGTCTaGGTGGATGAGCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWVGPRV*VDEQVG
Trigger: ACCCACCTGCTCATCCACTCAGACACGCGGCCCTAC...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGACGGCGCAGCCTCACTTaGGATTGTGCTGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: ETTSAEKDPARLPHLAAGRRSLT*DCAGSR
Trigger: GCGAGAGCCAGCACAATCTCAAGTGAGGCTGCGCCG...TCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGGGAAACAACTTCTGCTaGGAAAGACCCAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKGNNFC*ERPSQA
Trigger: AGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCC...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR TCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGGGAAACAACTTCTGCTaGGAAAGACCCAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLGNNFC*ERPSQA
Trigger: AGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCC...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGACTTCATCTCACTCTaGCTCCTCTCACAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQADFISL*LLSQGF
Trigger: AAAGCCCTGTGAGAGGAGGCAGAGTGAGATGAAGTC...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR GCA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGGTGGCATTTTCAGTGTaGACCCCACACCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: VSPASRPGCGARIPRGQLVAFSV*TPHLSG
Trigger: TCCGGACAGGTGTGGGGTGCACACTGAAAATGCCAC...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAGGTGTGAGCCTTCTTaGTCTTCACCAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRRCEPS*SSPGRS
Trigger: GCTCCTTCCTGGTGAAGAGCAAGAAGGCTCACACCT...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGAGGTGTGAGCCTTCTTaGTCTTCACCAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLRCEPS*SSPGRS
Trigger: GCTCCTTCCTGGTGAAGAGCAAGAAGGCTCACACCT...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGAATGGGGCCCTCTGGTaGCGGGGCCATCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWNGALW*RGHPGQ
Trigger: TTGGCCAGGATGGCCCCGGCACCAGAGGGCCCCATT...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTCCAAGGCGGGCTCAGTaGTGGGCACAAGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTPRRAQ*WAQEDC
Trigger: GCAGTCCTCTTGTGCCCAGCACTGAGCCCGCCTTGG...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGGAGAAGACCTTGTTaGACTTCACACAGTGGTACG +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGWRRPC*TSHSGT
Trigger: CGTACCACTGTGTGAAGTGCAACAAGGTCTTCTCCA...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGCCGCAGGTCCACCTTaGGCTGGAAGCCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQAAGPP*AGSLWC
Trigger: GCACCAAAGGCTTCCAGCGCAAGGTGGACCTGCGGC...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTCCGAAGCAGAGGGGGTaGCAGGCTTCTGACTGGGGT +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTPKQRG*QASDWG
Trigger: ACCCCAGTCAGAAGCCTGGCACCCCCTCTGCTTCGG...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGCAGAGGCCAGCTGAGTaGTGGTCGGAAGTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVQRPAE*WSEVGV
Trigger: GACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTG...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGCCGGCCGGGATCCCCTaGGGAACAGGACACTCCATT +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQPAGIP*GTGHSI
Trigger: AATGGAGTGTCCTGTTCCGCAGGGGATCCCGGCCGG...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636263.1
CDS-3UTR CCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCTAACCCTCGACACTTaGAGCGGCACGCTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKLTLDT*SGTLSL
Trigger: TAGAGAAAGCGTGCCGCTCCAAGTGTCGAGGGTTAG...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR CCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGAGCCTCTCTCGGGACTaGCCTCCACTCTGTCAACTG +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLSLSRD*PPLCQL
Trigger: CAGTTGACAGAGTGGAGGCCAGTCCCGAGAGAGGCT...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGCGGAGCTTCCCGAGGTaGGAACTGCAAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLRSFPR*ELQSLS
Trigger: AGAGAGGCTTTGCAGTTCCCACCTCGGGAAGCTCCG...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTCACCAGGAAGGAGCGTaGCATTTTCAGTGTGCACCC +
Preference number: 4 (lower is better)
Translates to: IPRGQLSAGRKSESASTSHQEGA*HFQCAP
Trigger: GGGTGCACACTGAAAATGCCACGCTCCTTCCTGGTG...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGCTGTTGCTTGGAGCCTaGTCTCTGGGCACCGGGGTA +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVLLLGA*SLGTGV
Trigger: TACCCCGGTGCCCAGAGACCAGGCTCCAAGCAACAG...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGCTGTTGCTTGGAGCCTaGTCTCTGGGCACCGGGGTA +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACELLLGA*SLGTGV
Trigger: TACCCCGGTGCCCAGAGACCAGGCTCCAAGCAACAG...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGTCCAGTCCAGGCACTaGTTTGGGAATAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQVQSRH*FGNRVL
Trigger: TAGCACTCTATTCCCAAACCAGTGCCTGGACTGGAC...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGTCCAGTCCAGGCACTaGTTTGGGAATAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAVQSRH*FGNRVL
Trigger: TAGCACTCTATTCCCAAACCAGTGCCTGGACTGGAC...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGGTACGCATCCATGCCTaGGGAGTAGCGGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLVRIHA*GVAEAE
Trigger: TTCAGCCTCCGCTACTCCCCAGGCATGGATGCGTAC...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTGGCCGGGTCCCACTATaGGAGCGTCGCACATGCACT +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTGRVPL*ERRTCT
Trigger: AGTGCATGTGCGACGCTCCCATAGTGGGACCCGGCC...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTCGAAGCTGCGCTCCTaGGAGTGGACGTGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTSKLRS*EWTCVC
Trigger: GCACACGCACGTCCACTCCCAGGAGCGCAGCTTCGA...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339463.7
ENST00000372122.4
CDS-3UTR CCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGATGTCGGACTTCTGGTaGAAACGCTTGCCGCAGAAC +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLMSDFW*KRLPQN
Trigger: GTTCTGCGGCAAGCGTTTCCACCAGAAGTCCGACAT...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGTTCATGTCGGACTTCTaGTGGAAACGCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLFMSDF*WKRLPQ
Trigger: CTGCGGCAAGCGTTTCCACCAGAAGTCCGACATGAA...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTCACTTGAGATTGTGCTaGCTCTCGCGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTHLRLC*LSRCRR
Trigger: GCGGCGGCACCGCGAGAGCCAGCACAATCTCAAGTG...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGCCACCTCCAGGAGACTaGAGATTTGGGCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: VSPASRPGCGARIPRGQLPPPGD*RFGHVR
Trigger: CCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGG...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGAGTCAGCCAGCACATCTaGCCGAAGCAGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ETTSAEKDPARLPHLAAGVSQHI*PKQRGC
Trigger: GCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGAC...TCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGCGGCGCAGCCTCACTTaGGATTGTGCTGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWRRSLT*DCAGSR
Trigger: GCGAGAGCCAGCACAATCTCAAGTGAGGCTGCGCCG...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGGAGATTTGGGCATGTaGGGCTGGCCTCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQGDLGM*GWPPGD
Trigger: GTCACCTGGAGGCCAGCCTCACATGCCCAAATCTCC...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGAGGGCTTTGTGTTCGTaGTGGATGGAGCCCATCATA +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLRALCS*WMEPII
Trigger: TATGATGGGCTCCATCCAGCACGAACACAAAGCCCT...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR GCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTGCCAAGTTCTGGTCCTaGTCCAGCTCCGGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTAKFWS*SSSGSR
Trigger: ACGAGAGCCGGAGCTGGAGCAGGACCAGAACTTGGC...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGTCCAGGAAGGCTGACTaGATGGTGGAGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWSRKAD*MVEGAC
Trigger: GCAGGCCCCCTCCACCATGCAGTCAGCCTTCCTGGA...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGTACAGGCTGACGGAGTaGTCCAGGAAGGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVYRLTE*SRKADC
Trigger: GCAGTCAGCCTTCCTGGAGCACTCCGTCAGCCTGTA...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTAGTGGTACGCATCCATaGCTGGGGAGTAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTSGTHP*LGSSGG
Trigger: GCCTCCGCTACTCCCCAGGCATGGATGCGTACCACT...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGAAGTGGTACGCATCCATaGCTGGGGAGTAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ETTSAEKDPARLPHLAAGSGTHP*LGSSGG
Trigger: GCCTCCGCTACTCCCCAGGCATGGATGCGTACCACT...TCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGTGCGGCACTCGAAGCTaGGCTCCTGGGAGTGGACGT +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWCGTRS*APGSGR
Trigger: ACGTCCACTCCCAGGAGCGCAGCTTCGAGTGCCGCA...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339463.7
ENST00000372122.4
CDS-3UTR GCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGTCTGGTGGAAACGCTTaGCGCAGAACTGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVSGGNA*RRTGRG
Trigger: ACCCCTGCCAGTTCTGCGGCAAGCGTTTCCACCAGA...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCCGCAGGTCCACCTTaGGCTGGAAGCCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWAAGPP*AGSLWC
Trigger: GCACCAAAGGCTTCCAGCGCAAGGTGGACCTGCGGC...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTAGCTGCGCTCCTTGTTaGACTTCACACAGTGGTACG +
Preference number: 4 (lower is better)
Translates to: IPRGQLSAGRKSESASTSSCAPC*TSHSGT
Trigger: CGTACCACTGTGTGAAGTGCAACAAGGAGCGCAGCT...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372123.5
CDS-3UTR GCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGTGCGGCACTCGAAGCTaGGCTCCTGCCGGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWCGTRS*APAGGN
Trigger: ATTTCCTCCGGCAGGAGCGCAGCTTCGAGTGCCGCA...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGTGTGTTCGTGCTGGATaGAGCCCATCATACTCAGCC +
Preference number: 4 (lower is better)
Translates to: VSPASRPGCGARIPRGQLCVRAG*SPSYSA
Trigger: GGCTGAGTATGATGGGCTCCATCCAGCACGAACACA...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR CCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGCTGTTGCTTGGAGCCTaGTCTCTGGGCACCGGGGTA +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWLLLGA*SLGTGV
Trigger: TACCCCGGTGCCCAGAGACCAGGCTCCAAGCAACAG...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGAGACAGGGCTGTTGCTTaGAGCCTGGTCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: ETTSAEKDPARLPHLAAGDRAVA*SLVSGH
Trigger: GTGCCCAGAGACCAGGCTCCAAGCAACAGCCCTGTC...TCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGGTCCAGTCCAGGCACTaGTTTGGGAATAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLVQSRH*FGNRVL
Trigger: TAGCACTCTATTCCCAAACCAGTGCCTGGACTGGAC...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGTCCAGTCCAGGCACTaGTTTGGGAATAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASVQSRH*FGNRVL
Trigger: TAGCACTCTATTCCCAAACCAGTGCCTGGACTGGAC...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGTACGCATCCATGCCTaGGGAGTAGCGGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACEVRIHA*GVAEAE
Trigger: TTCAGCCTCCGCTACTCCCCAGGCATGGATGCGTAC...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGTTGCACTTCACACAGTaGTACGCATCCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VSPASRPGCGARIPRGQLLHFTQ*YASMPG
Trigger: CCCAGGCATGGATGCGTACCACTGTGTGAAGTGCAA...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGCGAGCCCGTGAGGGGTaGAGAAGACCTTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACERAREG*RRPCCT
Trigger: AGTGCAACAAGGTCTTCTCCACCCCTCACGGGCTCG...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGAGGTCCACCTTGCGCTaGAAGCCTTTGGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACERSTLR*KPLVHS
Trigger: GCTGTGCACCAAAGGCTTCCAGCGCAAGGTGGACCT...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGTCCACCTTGCGCTaGAAGCCTTTGGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVRSTLR*KPLVHS
Trigger: GCTGTGCACCAAAGGCTTCCAGCGCAAGGTGGACCT...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGCACTTGAGATTGTGCTaGCTCTCGCGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWHLRLC*LSRCRR
Trigger: GCGGCGGCACCGCGAGAGCCAGCACAATCTCAAGTG...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGAGGCCAGCTGAGTGCTaGTCGGAAGTCGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWRPAEC*SEVGVS
Trigger: GCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR TCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGGAGATTTGGGCATGTaGGGCTGGCCTCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWGDLGM*GWPPGD
Trigger: GTCACCTGGAGGCCAGCCTCACATGCCCAAATCTCC...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCCACACAGCAATTTCATaGGTCTCAAAACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGHTAIS*VSKQAG
Trigger: ACCAGCTTGTTTTGAGACTCATGAAATTGCTGTGTG...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGTCCCGAGGTGGGAACTaGAAAGCCTCTCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQSRGGN*KASLGT
Trigger: AGTCCCGAGAGAGGCTTTGCAGTTCCCACCTCGGGA...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGTACAGGCTGACGGAGTaGTCCAGGAAGGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWYRLTE*SRKADC
Trigger: GCAGTCAGCCTTCCTGGAGCACTCCGTCAGCCTGTA...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGTACAGGCTGACGGAGTaGTCCAGGAAGGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQYRLTE*SRKADC
Trigger: GCAGTCAGCCTTCCTGGAGCACTCCGTCAGCCTGTA...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTCGTGGCCGAAGGTTTTaGCGCAGATGTCACAGGCGA +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTRGRRF*RRCHRR
Trigger: TCGCCTGTGACATCTGCGGCAAAACCTTCGGCCACG...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCTTTGACAGCAATAACTaGCAGTTTCTCCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: GQLSAGRKSESASTSGRSFDSNN*QFLQPH
Trigger: GTGAGGCTGGAGAAACTGGCAGTTATTGCTGTCAAA...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp GAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGAAGCCTCTCTCGGGACTaGCCTCCACTCTGTCAACTG +
Preference number: 4 (lower is better)
Translates to: ETTSAEKDPARLPHLAAGSLSRD*PPLCQL
Trigger: CAGTTGACAGAGTGGAGGCCAGTCCCGAGAGAGGCT...TCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGCTGTTGCTTGGAGCCTaGTCTCTGGGCACCGGGGTA +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWLLLGA*SLGTGV
Trigger: TACCCCGGTGCCCAGAGACCAGGCTCCAAGCAACAG...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGTACGCATCCATGCCTaGGGAGTAGCGGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQVRIHA*GVAEAE
Trigger: TTCAGCCTCCGCTACTCCCCAGGCATGGATGCGTAC...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGTTGCACTTCACACAGTaGTACGCATCCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLLHFTQ*YASMPG
Trigger: CCCAGGCATGGATGCGTACCACTGTGTGAAGTGCAA...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGATGTCGGACTTCTGGTaGAAACGCTTGCCGCAGAAC +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLMSDFW*KRLPQN
Trigger: GTTCTGCGGCAAGCGTTTCCACCAGAAGTCCGACAT...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTAGGTCCACCTTGCGCTaGAAGCCTTTGGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTRSTLR*KPLVHS
Trigger: GCTGTGCACCAAAGGCTTCCAGCGCAAGGTGGACCT...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGAAGGTCCACCTTGCGCTaGAAGCCTTTGGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: ETTSAEKDPARLPHLAAGRSTLR*KPLVHS
Trigger: GCTGTGCACCAAAGGCTTCCAGCGCAAGGTGGACCT...TCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGTGGGCAGCAGGCAGGTaGAGGTTCTGTCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWWAAGR*RFCLWV
Trigger: GACCCACAGACAGAACCTCCACCTGCCTGCTGCCCA...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGAGCCCAGGCTGGTCTTaGACTCCTGGTCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQSPGWS*TPGLKQ
Trigger: TTGCTTGAGACCAGGAGTTCAAGACCAGCCTGGGCT...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR TCA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTCACACAGCAATTTCATaGGTCTCAAAACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAHTAIS*VSKQAG
Trigger: ACCAGCTTGTTTTGAGACTCATGAAATTGCTGTGTG...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTTTTGACAGCAATAACTaGCAGTTTCTCCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASFDSNN*QFLQPH
Trigger: GTGAGGCTGGAGAAACTGGCAGTTATTGCTGTCAAA...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGTGCGGCACTCGAAGCTaGGCTCCTTGTTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWCGTRS*APCCTS
Trigger: TGAAGTGCAACAAGGAGCGCAGCTTCGAGTGCCGCA...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372123.5
CDS-3UTR CCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGTGGCCATAGGTTGTaGCCAAGGTGTCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTCGHRL*PRCPRR
Trigger: TCTCCTGGGACACCTTGGCCACAACCTATGGCCACA...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGATGTGGCCATAGGTTGTaGCCAAGGTGTCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: ETTSAEKDPARLPHLAAGCGHRL*PRCPRR
Trigger: TCTCCTGGGACACCTTGGCCACAACCTATGGCCACA...TCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGCGAGCCCGTGAGGGGTaGAGAAGACCTTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWRAREG*RRPCCT
Trigger: AGTGCAACAAGGTCTTCTCCACCCCTCACGGGCTCG...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGATGTCGGACTTCTGGTaGAAACGCTTGCCGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVMSDFW*KRLPQN
Trigger: GTTCTGCGGCAAGCGTTTCCACCAGAAGTCCGACAT...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGTTCATGTCGGACTTCTaGTGGAAACGCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACEFMSDF*WKRLPQ
Trigger: CTGCGGCAAGCGTTTCCACCAGAAGTCCGACATGAA...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGAGGTCCACCTTGCGCTaGAAGCCTTTGGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWRSTLR*KPLVHS
Trigger: GCTGTGCACCAAAGGCTTCCAGCGCAAGGTGGACCT...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGGAACAAAAACCAGCCTaGTGCCTACTCCTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: SRPGCGARIPRGQLSAGREQKPA*CLLLQN
Trigger: ATTTTGAAGGAGTAGGCATCAGGCTGGTTTTTGTTC...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR TCA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGCCAGGGACACATCTTaGGTATTCTTTAGGACAAAA +
Preference number: 4 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASARDTS*VFFRTK
Trigger: TTTTGTCCTAAAGAATACTCAAGATGTGTCCCTGGC...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR TCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGACAATAGGCTGGTCTTaGACTCCTGGCCTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQTIGWS*TPGLKR
Trigger: TCGCTTGAGGCCAGGAGTTCAAGACCAGCCTATTGT...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR TCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTGGAAACAACTTCTGCTaGGAAAGACCCAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTGNNFC*ERPSQA
Trigger: AGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCC...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGGAGCTCAGCCGTATTTaGTTATCAAAACTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKELSRI*LSKLSR
Trigger: CCTGGAAAGTTTTGATAAGCAAATACGGCTGAGCTC...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR GCA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGAGGTGTGAGCCTTCTTaGTCTTCACCAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQRCEPS*SSPGRS
Trigger: GCTCCTTCCTGGTGAAGAGCAAGAAGGCTCACACCT...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGTGGAGAAGACCTTGTTaGACTTCACACAGTGGTACG +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLWRRPC*TSHSGT
Trigger: CGTACCACTGTGTGAAGTGCAACAAGGTCTTCTCCA...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGTGTGGCCATAGGTTGTaGCCAAGGTGTCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWCGHRL*PRCPRR
Trigger: TCTCCTGGGACACCTTGGCCACAACCTATGGCCACA...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTATGTCGGACTTCTGGTaGAAACGCTTGCCGCAGAAC +
Preference number: 4 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTMSDFW*KRLPQN
Trigger: GTTCTGCGGCAAGCGTTTCCACCAGAAGTCCGACAT...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGCCACCTCCAGGAGACTaGAGATTTGGGCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWPPPGD*RFGHVR
Trigger: CCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGG...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTCCTACTCCTTCAAAATaGCTTTCATATCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: SAGRKSESASTSGRSRGGPTPSK*LSYPTV
Trigger: AACTGTGGGATATGAAAGGCATTTTGAAGGAGTAGG...ACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR GCA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGTTTGACAGCAATAACTaGCAGTTTCTCCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLFDSNN*QFLQPH
Trigger: GTGAGGCTGGAGAAACTGGCAGTTATTGCTGTCAAA...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGGTCCAGTCCAGGCACTaGTTTGGGAATAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWVQSRH*FGNRVL
Trigger: TAGCACTCTATTCCCAAACCAGTGCCTGGACTGGAC...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGTTGCACTTCACACAGTaGTACGCATCCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWLHFTQ*YASMPG
Trigger: CCCAGGCATGGATGCGTACCACTGTGTGAAGTGCAA...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGTTCATGTCGGACTTCTaGTGGAAACGCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWFMSDF*WKRLPQ
Trigger: CTGCGGCAAGCGTTTCCACCAGAAGTCCGACATGAA...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR TCA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTACTCTGTCAACTGTGTaGCTCTTTGCACAAATAGAT +
Preference number: 4 (lower is better)
Translates to: IPRGQLSAGRKSESASTSTLSTV*LFAQID
Trigger: ATCTATTTGTGCAAAGAGTCACACAGTTGACAGAGT...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR GCA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGTTTCCAGATGCGAGTTaGAGGAAGTTTCAAAAAGAT +
Preference number: 4 (lower is better)
Translates to: KSESASTSGRSRGGARLLFPDAS*RKFQKD
Trigger: ATCTTTTTGAAACTTCCTGCAACTCGCATCTGGAAA...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR TCA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGCACACAGCAATTTCATaGGTCTCAAAACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GRLLSSPTSRRLEIWACEHTAIS*VSKQAG
Trigger: ACCAGCTTGTTTTGAGACTCATGAAATTGCTGTGTG...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGCAGCACTTTTCCAGATaGGAGTTGCAGGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWQHFSR*ELQEVS
Trigger: TGAAACTTCCTGCAACTCGCATCTGGAAAAGTGCTG...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR GCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGTGGAGAAGACCTTGTTaGACTTCACACAGTGGTACG +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWWRRPC*TSHSGT
Trigger: CGTACCACTGTGTGAAGTGCAACAAGGTCTTCTCCA...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR GCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGTTTGACAGCAATAACTaGCAGTTTCTCCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWFDSNN*QFLQPH
Trigger: GTGAGGCTGGAGAAACTGGCAGTTATTGCTGTCAAA...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR TCA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGCACACAGCAATTTCATaGGTCTCAAAACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWHTAIS*VSKQAG
Trigger: ACCAGCTTGTTTTGAGACTCATGAAATTGCTGTGTG...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS GCA 90 bp TGGCGGAGGCCGCCGTCGGCCTTGGCCCTTTCACGACGGGGGAGGTaGTGTACGTCCAAGATGGCGGCGCCCTGTAGGCTGGAGGGACTG +
Preference number: 5 (lower is better)
Translates to: WRRPPSALALSRRGR*CTSKMAAPCRLEGL
Trigger: CAGTCCCTCCAGCCTACAGGGCGCCGCCATCTTGGACGTACAGCACCTCCCCCGTCGTGAAAGGGCCAAGGCCGACGGCGGCCTCCGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS-3UTR CAA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCGAGCGCTTGAAGGCCTaGCCGCACATGCGGCACTCG +
Preference number: 5 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGERLKA*PHMRHS
Trigger: CGAGTGCCGCATGTGCGGCAAGGCCTTCAAGCGCTC...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS TCA 90 bp CCAAGGCGGGCTCAGTGCTGGGCACAAGAGGACTGCCGTACAGGCTaGCGGAGTGCTCCAGGAAGGCTGACTGCATGGTGGAGGGGGCCT +
Preference number: 5 (lower is better)
Translates to: PRRAQCWAQEDCRTG*RSAPGRLTAWWRGP
Trigger: AGGCCCCCTCCACCATGCAGTCAGCCTTCCTGGAGCACTCCGTCAGCCTGTACGGCAGTCCTCTTGTGCCCAGCACTGAGCCCGCCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS GCA 90 bp AGTGTGCACCCCACACCTGTCCGGAGCTGTCCCTCGCCTGGGTTCTaGCGGAGCTTCCCGAGGTGGGAACTGCAAAGCCTCTCTCGGGAC +
Preference number: 5 (lower is better)
Translates to: SVHPTPVRSCPSPGF*RSFPRWELQSLSRD
Trigger: GTCCCGAGAGAGGCTTTGCAGTTCCCACCTCGGGAAGCTCCGGCAGAACCCAGGCGAGGGACAGCTCCGGACAGGTGTGGGGTGCACACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGAGCGCTTGAAGGCCTaGCCGCACATGCGGCACTCG +
Preference number: 5 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAERLKA*PHMRHS
Trigger: CGAGTGCCGCATGTGCGGCAAGGCCTTCAAGCGCTC...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCCGCCGCAGGTCCACCTaGCGCTGGAAGCCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: GQLSAGRKSESASTSGRSRRRST*RWKPLV
Trigger: CACCAAAGGCTTCCAGCGCAAGGTGGACCTGCGGCG...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTCGCCGCAGGTCCACCTaGCGCTGGAAGCCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQARRRST*RWKPLV
Trigger: CACCAAAGGCTTCCAGCGCAAGGTGGACCTGCGGCG...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS GCA 90 bp TGCATCCTGTCAGCACGCCCGCCTATGGAGGGCTCAGCCCTTTCATaGTCAGACAGGCCGGTCAGGAAGCCCCGTCACAGGGAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: CILSARPPMEGSALS*SDRPVRKPRHREAP
Trigger: TGGAGCCTCCCTGTGACGGGGCTTCCTGACCGGCCTGTCTGAGCATGAAAGGGCTGAGCCCTCCATAGGCGGGCGTGCTGACAGGATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS CCA 90 bp GTCCGGAGCTGTCCCTCGCCTGGGTTCTGCCGGAGCTTCCCGAGGTaGGAACTGCAAAGCCTCTCTCGGGACTGGCCTCCACTCTGTCAA +
Preference number: 5 (lower is better)
Translates to: VRSCPSPGFCRSFPR*ELQSLSRDWPPLCQ
Trigger: TTGACAGAGTGGAGGCCAGTCCCGAGAGAGGCTTTGCAGTTCCCACCTCGGGAAGCTCCGGCAGAACCCAGGCGAGGGACAGCTCCGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS CCA 90 bp CGGCCTTGGCCCTTTCACGACGGGGGAGGTGCTGTACGTCCAAGATaGCGGCGCCCTGTAGGCTGGAGGGACTGTGAGGTAAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: RPWPFHDGGGAVRPR*RRPVGWRDCEVNSW
Trigger: CCAGCTGTTTACCTCACAGTCCCTCCAGCCTACAGGGCGCCGCCATCTTGGACGTACAGCACCTCCCCCGTCGTGAAAGGGCCAAGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS-3UTR CAA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCGGCTCTCGTTTGAGGTaGGTCCAGTCCAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGGSRLR*VQSRHW
Trigger: CCAGTGCCTGGACTGGACCAACCTCAAACGAGAGCC...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCAGCTCCGGCTCTCGTTaGAGGTTGGTCCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGSSGSR*RLVQSR
Trigger: CCTGGACTGGACCAACCTCAAACGAGAGCCGGAGCT...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGGAGCGCTTGAAGGCCTaGCCGCACATGCGGCACTCG +
Preference number: 5 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRERLKA*PHMRHS
Trigger: CGAGTGCCGCATGTGCGGCAAGGCCTTCAAGCGCTC...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGGAGCGCTTGAAGGCCTaGCCGCACATGCGGCACTCG +
Preference number: 5 (lower is better)
Translates to: KSESASTSGRSRGGARLLERLKA*PHMRHS
Trigger: CGAGTGCCGCATGTGCGGCAAGGCCTTCAAGCGCTC...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGCCGGCGCAGCCTCACTaGAGATTGTGCTGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQPAQPH*RLCWLS
Trigger: CGAGAGCCAGCACAATCTCAAGTGAGGCTGCGCCGG...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS TCA 90 bp CACAAGAGGACTGCCGTACAGGCTGACGGAGTGCTCCAGGAAGGCTaGCTGCATGGTGGAGGGGGCCTGCCGGTAGCTGTGGCCATAGGT +
Preference number: 5 (lower is better)
Translates to: HKRTAVQADGVLQEG*LHGGGGLPVAVAIG
Trigger: ACCTATGGCCACAGCTACCGGCAGGCCCCCTCCACCATGCAGTCAGCCTTCCTGGAGCACTCCGTCAGCCTGTACGGCAGTCCTCTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS GCA 90 bp GCTGTCCCTCGCCTGGGTTCTGCCGGAGCTTCCCGAGGTGGGAACTaGAAAGCCTCTCTCGGGACTGGCCTCCACTCTGTCAACTGTGTG +
Preference number: 5 (lower is better)
Translates to: AVPRLGSAGASRGGN*KASLGTGLHSVNCV
Trigger: CACACAGTTGACAGAGTGGAGGCCAGTCCCGAGAGAGGCTTTGCAGTTCCCACCTCGGGAAGCTCCGGCAGAACCCAGGCGAGGGACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCGGCTCTCGTTTGAGGTaGGTCCAGTCCAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: GQLSAGRKSESASTSGRSGSRLR*VQSRHW
Trigger: CCAGTGCCTGGACTGGACCAACCTCAAACGAGAGCC...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTAGCTCCGGCTCTCGTTaGAGGTTGGTCCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQASSGSR*RLVQSR
Trigger: CCTGGACTGGACCAACCTCAAACGAGAGCCGGAGCT...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGCGTGGCCGAAGGTTTaGCCGCAGATGTCACAGGCG +
Preference number: 5 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASAWPKV*PQMSQA
Trigger: CGCCTGTGACATCTGCGGCAAAACCTTCGGCCACGC...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTCGCCGCAGGTCCACCTaGCGCTGGAAGCCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: IPRGQLSAGRKSESASTSRRRST*RWKPLV
Trigger: CACCAAAGGCTTCCAGCGCAAGGTGGACCTGCGGCG...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCCAGCCTCACTTGAGATaGTGCTGGCTCTCGCGGTGC +
Preference number: 5 (lower is better)
Translates to: GQLSAGRKSESASTSGRSQPHLR*CWLSRC
Trigger: GCACCGCGAGAGCCAGCACAATCTCAAGTGAGGCTG...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCCGGCGCAGCCTCACTaGAGATTGTGCTGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKPAQPH*RLCWLS
Trigger: CGAGAGCCAGCACAATCTCAAGTGAGGCTGCGCCGG...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTCCGGCGCAGCCTCACTaGAGATTGTGCTGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASPAQPH*RLCWLS
Trigger: CGAGAGCCAGCACAATCTCAAGTGAGGCTGCGCCGG...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS GCA 90 bp AATGTCCTCCACTGTCAAGGGTCCCACACCTCCTCAGAGCTATCCTaGGTTAGGGCCCCTGCTGTGCCCAGTCACGGGCTGGGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: NVLHCQGSHTSSELS*VRAPAVPSHGLGVA
Trigger: AGCCACTCCCAGCCCGTGACTGGGCACAGCAGGGGCCCTAACGCAGGATAGCTCTGAGGAGGTGTGGGACCCTTGACAGTGGAGGACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS CCA 90 bp GCTGCGCTCCTTGTTGCACTTCACACAGTGGTACGCATCCATGCCTaGGGAGTAGCGGAGGCTGAAGTCCAAGGCGGGCTCAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: AALLVALHTVVRIHA*GVAEAEVQGGLSAG
Trigger: CCCAGCACTGAGCCCGCCTTGGACTTCAGCCTCCGCTACTCCCCAGGCATGGATGCGTACCACTGTGTGAAGTGCAACAAGGAGCGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372123.5
CDS CCA 90 bp AGCAGATGTCCTCCACCACGTGCATCCTGTCAGCACGCCCGCCTATaGAGGGCTCAGCCCTTTCATGCTCAGACAGGCCGGTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: SRCPPPRASCQHARL*RAQPFHAQTGRSGS
Trigger: GCTTCCTGACCGGCCTGTCTGAGCATGAAAGGGCTGAGCCCTCCATAGGCGGGCGTGCTGACAGGATGCACGTGGTGGAGGACATCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS-3UTR CAA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGAGCTCCGGCTCTCGTTaGAGGTTGGTCCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: KSESASTSGRSRGGARLLSSGSR*RLVQSR
Trigger: CCTGGACTGGACCAACCTCAAACGAGAGCCGGAGCT...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGAGCTGTGGCCATAGGTaGTGGCCAAGGTGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: KSESASTSGRSRGGARLLSCGHR*WPRCPR
Trigger: CCTGGGACACCTTGGCCACAACCTATGGCCACAGCT...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCTTGCGCTGGAAGCCTTaGGTGCACAGCTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: GQLSAGRKSESASTSGRSLRWKP*VHSSQL
Trigger: CAGCTGTGAGCTGTGCACCAAAGGCTTCCAGCGCAA...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTTGCGCTGGAAGCCTTaGGTGCACAGCTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQALRWKP*VHSSQL
Trigger: CAGCTGTGAGCTGTGCACCAAAGGCTTCCAGCGCAA...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCTGCGCCGCAGGTCCACCTaGCGCTGGAAGCCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: DSCPVPPPGDWRFGHVRLRRRST*RWKPLV
Trigger: CACCAAAGGCTTCCAGCGCAAGGTGGACCTGCGGCG...CAGCCTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGCCGGCGCAGCCTCACTaGAGATTGTGCTGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: VSPASRPGCGARIPRGQLPAQPH*RLCWLS
Trigger: CGAGAGCCAGCACAATCTCAAGTGAGGCTGCGCCGG...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp TCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTGCCAGGCTCCCACACTaGGCAGCAGGAGAAATGTTG +
Preference number: 5 (lower is better)
Translates to: SEVGVSQHIWPKQRGCQAARLPH*AAGEML
Trigger: CAACATTTCTCCTGCTGCCAAGTGTGGGAGCCTGGC...AGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS TCA 90 bp ACTTCACACAGTGGTACGCATCCATGCCTGGGGAGTAGCGGAGGCTaGAGTCCAAGGCGGGCTCAGTGCTGGGCACAAGAGGACTGCCGT +
Preference number: 5 (lower is better)
Translates to: TSHSGTHPCLGSSGG*SPRRAQCWAQEDCR
Trigger: ACGGCAGTCCTCTTGTGCCCAGCACTGAGCCCGCCTTGGACTTCAGCCTCCGCTACTCCCCAGGCATGGATGCGTACCACTGTGTGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS GCA 90 bp ACATCGTCAGTTATGAGTGGAAGAGCCTCTTCCTTCCGGCGGGGCTaGCGAGCGCGGCCGTCTATCCTTCCTTTCGAGAAGGAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: TSSVMSGRASSFRRG*RARPSILPFEKEGR
Trigger: CCTCCCCTCCTTCTCGAAAGGAAGGATAGACGGCCGCGCTCGGCAGCCCCGCCGGAAGGAAGAGGCTCTTCCACTCATAACTGACGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS-3UTR CAA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGCTAAGGACAGGGCTGTaGCTTGGAGCCTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: KSESASTSGRSRGGARLLLRTGL*LGAWSL
Trigger: CAGAGACCAGGCTCCAAGCAACAGCCCTGTCCTTAG...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTCTAAGGACAGGGCTGTaGCTTGGAGCCTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: EVGVSQHIWPKQRGCQASLRTGL*LGAWSL
Trigger: CAGAGACCAGGCTCCAAGCAACAGCCCTGTCCTTAG...AGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTAGCTCCGGCTCTCGTTaGAGGTTGGTCCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: IPRGQLSAGRKSESASTSSSGSR*RLVQSR
Trigger: CCTGGACTGGACCAACCTCAAACGAGAGCCGGAGCT...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTAGCTGTGGCCATAGGTaGTGGCCAAGGTGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: IPRGQLSAGRKSESASTSSCGHR*WPRCPR
Trigger: CCTGGGACACCTTGGCCACAACCTATGGCCACAGCT...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp GGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCGGGGTGGAGAAGACCTaGTTGCACTTCACACAGTGG +
Preference number: 5 (lower is better)
Translates to: GQLSAGRKSESASTSGRSGVEKT*LHFTQW
Trigger: CCACTGTGTGAAGTGCAACAAGGTCTTCTCCACCCC...GCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
CDS-3UTR CAA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGTTGCGCTGGAAGCCTTaGGTGCACAGCTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRLRWKP*VHSSQL
Trigger: CAGCTGTGAGCTGTGCACCAAAGGCTTCCAGCGCAA...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGGCCAGGCTCCCACACTaGGCAGCAGGAGAAATGTTG +
Preference number: 5 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRARLPH*AAGEML
Trigger: CAACATTTCTCCTGCTGCCAAGTGTGGGAGCCTGGC...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCGCTAGAGGAAGGCACTaGAGCACACCTGGAAACAAC +
Preference number: 5 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGARGRH*STPGNN
Trigger: GTTGTTTCCAGGTGTGCTCAAGTGCCTTCCTCTAGC...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS GCA 90 bp GGGGAGATGTCACACAGCCAAATGCAGCAGATGTCCTCCACCACGTaGATCCTGTCAGCACGCCCGCCTATGGAGGGCTCAGCCCTTTCA +
Preference number: 5 (lower is better)
Translates to: GEMSHSQMQQMSSTT*ILSARPPMEGSALS
Trigger: TGAAAGGGCTGAGCCCTCCATAGGCGGGCGTGCTGACAGGATGCACGTGGTGGAGGACATCTGCTGCATTTGGCTGTGTGACATCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS GCA 90 bp CAGAGACCTGTTCAGAAGGCGAGGGGGAGATGTCACACAGCCAAATaGAGCAGATGTCCTCCACCACGTGCATCCTGTCAGCACGCCCGC +
Preference number: 5 (lower is better)
Translates to: QRPVQKARGRCHTAK*SRCPPPRASCQHAR
Trigger: GCGGGCGTGCTGACAGGATGCACGTGGTGGAGGACATCTGCTGCATTTGGCTGTGTGACATCTCCCCCTCGCCTTCTGAACAGGTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS CCA 90 bp GGAGAAGACCTTGTTGCACTTCACACAGTGGTACGCATCCATGCCTaGGGAGTAGCGGAGGCTGAAGTCCAAGGCGGGCTCAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GEDLVALHTVVRIHA*GVAEAEVQGGLSAG
Trigger: CCCAGCACTGAGCCCGCCTTGGACTTCAGCCTCCGCTACTCCCCAGGCATGGATGCGTACCACTGTGTGAAGTGCAACAAGGTCTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS CCA 90 bp CAGAGCTATCCTGCGTTAGGGCCCCTGCTGTGCCCAGTCACGGGCTaGGAGTGGCTCACGAGATGTGTGGCTTCATTGCAAATGGGGTGT +
Preference number: 5 (lower is better)
Translates to: QSYPALGPLLCPVTG*EWLTRCVASLQMGC
Trigger: ACACCCCATTTGCAATGAAGCCACACATCTCGTGAGCCACTCCCAGCCCGTGACTGGGCACAGCAGGGGCCCTAACGCAGGATAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS-3UTR CAA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGCACAATAGGCTGGTCTaGAACTCCTGGCCTCAAGCG +
Preference number: 5 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRHNRLV*NSWPQA
Trigger: CGCTTGAGGCCAGGAGTTCAAGACCAGCCTATTGTG...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR CAA 90 bp TCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGAGTGCTGGTCGGGGGGTGGAGAAGACCTaGTTGCACTTCACACAGTGG +
Preference number: 5 (lower is better)
Translates to: SRPGCGARIPRGQLSAGRGVEKT*LHFTQW
Trigger: CCACTGTGTGAAGTGCAACAAGGTCTTCTCCACCCC...CCGACCAGCACTCAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
CDS-3UTR CAA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGCGTGGCCGAAGGTTTaGCCGCAGATGTCACAGGCG +
Preference number: 5 (lower is better)
Translates to: GRLLSSPTSRRLEIWACEAWPKV*PQMSQA
Trigger: CGCCTGTGACATCTGCGGCAAAACCTTCGGCCACGC...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGGAGCGCTTGAAGGCCTaGCCGCACATGCGGCACTCG +
Preference number: 5 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWERLKA*PHMRHS
Trigger: CGAGTGCCGCATGTGCGGCAAGGCCTTCAAGCGCTC...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS CCA 90 bp TATCCTGCGTTAGGGCCCCTGCTGTGCCCAGTCACGGGCTGGGAGTaGCTCACGAGATGTGTGGCTTCATTGCAAATGGGGTGTAGATCC +
Preference number: 5 (lower is better)
Translates to: YPALGPLLCPVTGWE*LTRCVASLQMGCRS
Trigger: GGATCTACACCCCATTTGCAATGAAGCCACACATCTCGTGAGCCACTCCCAGCCCGTGACTGGGCACAGCAGGGGCCCTAACGCAGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS-3UTR CAA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGGACAGGGCTGTTGCTaGGAGCCTGGTCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQGQGCC*EPGLWA
Trigger: TGCCCAGAGACCAGGCTCCAAGCAACAGCCCTGTCC...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp TGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGTGGAGAAGACCTTGTaGCACTTCACACAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: WSEVGVSQHIWPKQRGCQVEKTL*HFTQWY
Trigger: GTACCACTGTGTGAAGTGCAACAAGGTCTTCTCCAC...CTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGGCGTGGCCGAAGGTTTaGCCGCAGATGTCACAGGCG +
Preference number: 5 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWAWPKV*PQMSQA
Trigger: CGCCTGTGACATCTGCGGCAAAACCTTCGGCCACGC...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGACCGGCGCAGCCTCACTaGAGATTGTGCTGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: ETTSAEKDPARLPHLAAGPAQPH*RLCWLS
Trigger: CGAGAGCCAGCACAATCTCAAGTGAGGCTGCGCCGG...TCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp AGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGGCTAGAGGAAGGCACTaGAGCACACCTGGAAACAAC +
Preference number: 5 (lower is better)
Translates to: RPAECWSEVGVSQHIWPKARGRH*STPGNN
Trigger: GTTGTTTCCAGGTGTGCTCAAGTGCCTTCCTCTAGC...CTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGAAGCTGCGCTCCTTGTaGCACTTCACACAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: KSESASTSGRSRGGARLLKLRSL*HFTQWY
Trigger: GTACCACTGTGTGAAGTGCAACAAGGAGCGCAGCTT...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372123.5
CDS-3UTR CAA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGAACAGGACACTCCATaGGGGCGGCCTGGGAGTGGA +
Preference number: 5 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQEQDTP*GRPGSG
Trigger: TCCACTCCCAGGCCGCCCCAATGGAGTGTCCTGTTC...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636263.1
CDS CCA 90 bp TGCTCCAGCTCCGGCTCTCGTTTGAGGTTGGTCCAGTCCAGGCACTaGTTTGGGAATAGAGTGCTAAGGACAGGGCTGTTGCTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: CSSSGSRLRLVQSRH*FGNRVLRTGLLLGA
Trigger: GGCTCCAAGCAACAGCCCTGTCCTTAGCACTCTATTCCCAAACCAGTGCCTGGACTGGACCAACCTCAAACGAGAGCCGGAGCTGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGGCTCTCGTTTGAGGTaGGTCCAGTCCAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQGSRLR*VQSRHW
Trigger: CCAGTGCCTGGACTGGACCAACCTCAAACGAGAGCC...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGGGCTCTCGTTTGAGGTaGGTCCAGTCCAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWGSRLR*VQSRHW
Trigger: CCAGTGCCTGGACTGGACCAACCTCAAACGAGAGCC...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTGGCTCTCGTTTGAGGTaGGTCCAGTCCAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTGSRLR*VQSRHW
Trigger: CCAGTGCCTGGACTGGACCAACCTCAAACGAGAGCC...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGAAGCTCCGGCTCTCGTTaGAGGTTGGTCCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ETTSAEKDPARLPHLAAGSSGSR*RLVQSR
Trigger: CCTGGACTGGACCAACCTCAAACGAGAGCCGGAGCT...TCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGAGCTGTGGCCATAGGTaGTGGCCAAGGTGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWSCGHR*WPRCPR
Trigger: CCTGGGACACCTTGGCCACAACCTATGGCCACAGCT...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGGTGGAGAAGACCTTGTaGCACTTCACACAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: KSESASTSGRSRGGARLLVEKTL*HFTQWY
Trigger: GTACCACTGTGTGAAGTGCAACAAGGTCTTCTCCAC...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCGTGGCCGAAGGTTTaGCCGCAGATGTCACAGGCG +
Preference number: 5 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWAWPKV*PQMSQA
Trigger: CGCCTGTGACATCTGCGGCAAAACCTTCGGCCACGC...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGTTGCGCTGGAAGCCTTaGGTGCACAGCTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVLRWKP*VHSSQL
Trigger: CAGCTGTGAGCTGTGCACCAAAGGCTTCCAGCGCAA...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTCAGCCTCACTTGAGATaGTGCTGGCTCTCGCGGTGC +
Preference number: 5 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTQPHLR*CWLSRC
Trigger: GCACCGCGAGAGCCAGCACAATCTCAAGTGAGGCTG...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGACAGCCTCACTTGAGATaGTGCTGGCTCTCGCGGTGC +
Preference number: 5 (lower is better)
Translates to: ETTSAEKDPARLPHLAAGQPHLR*CWLSRC
Trigger: GCACCGCGAGAGCCAGCACAATCTCAAGTGAGGCTG...TCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GTTTCTCCAGCCTCACGGCCTGGTTGTGGAGCTAGAATCCCCAGAGGCCAGCTGGCTAGAGGAAGGCACTaGAGCACACCTGGAAACAAC +
Preference number: 5 (lower is better)
Translates to: VSPASRPGCGARIPRGQLARGRH*STPGNN
Trigger: GTTGTTTCCAGGTGTGCTCAAGTGCCTTCCTCTAGC...CAGCTGGCCTCTGGGGATTCTAGCTCCACAACCAGGCCGTGAGGCTGGAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp ATCCCCAGAGGCCAGCTGAGTGCTGGTCGGAAGTCGGAGTCAGCCAGCACATCTGCTAGAGGAAGGCACTaGAGCACACCTGGAAACAAC +
Preference number: 5 (lower is better)
Translates to: IPRGQLSAGRKSESASTSARGRH*STPGNN
Trigger: GTTGTTTCCAGGTGTGCTCAAGTGCCTTCCTCTAGC...AGATGTGCTGGCTGACTCCGACTTCCGACCAGCACTCAGCTGGCCTCTGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS-3UTR CAA 90 bp GAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGACTAAGGACAGGGCTGTaGCTTGGAGCCTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: ETTSAEKDPARLPHLAAGLRTGL*LGAWSL
Trigger: CAGAGACCAGGCTCCAAGCAACAGCCCTGTCCTTAG...TCCTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GAGCACACCTGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTCTAAGGACAGGGCTGTaGCTTGGAGCCTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: EHTWKQLLLRKTQPGSHTLRTGL*LGAWSL
Trigger: CAGAGACCAGGCTCCAAGCAACAGCCCTGTCCTTAG...AGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCAGGTGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp ATAGCCAGAAAGAGGCCGGCTAAAATCCAAGGTGACCAGGTCCCAGCTCAGTGGCTAAGGACAGGGCTGTaGCTTGGAGCCTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: IARKRPAKIQGDQVPAQWLRTGL*LGAWSL
Trigger: CAGAGACCAGGCTCCAAGCAACAGCCCTGTCCTTAG...CCACTGAGCTGGGACCTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGGGGTGGAGAAGACCTaGTTGCACTTCACACAGTGG +
Preference number: 5 (lower is better)
Translates to: GRLLSSPTSRRLEIWACEGVEKT*LHFTQW
Trigger: CCACTGTGTGAAGTGCAACAAGGTCTTCTCCACCCC...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGCAGCCTCACTTGAGATaGTGCTGGCTCTCGCGGTGC +
Preference number: 5 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWQPHLR*CWLSRC
Trigger: GCACCGCGAGAGCCAGCACAATCTCAAGTGAGGCTG...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGCCAGGCTCCCACACTaGGCAGCAGGAGAAATGTTG +
Preference number: 5 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQARLPH*AAGEML
Trigger: CAACATTTCTCCTGCTGCCAAGTGTGGGAGCCTGGC...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGTCGAAGCTGCGCTCCTaGTTGCACTTCACACAGTGG +
Preference number: 5 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVSKLRS*LHFTQW
Trigger: CCACTGTGTGAAGTGCAACAAGGAGCGCAGCTTCGA...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372123.5
CDS CCA 90 bp TCACGGGCTGGGAGTGGCTCACGAGATGTGTGGCTTCATTGCAAATaGGGTGTAGATCCAGAGCGGTGGCAGCTGGGCCTTCAACAATTA +
Preference number: 5 (lower is better)
Translates to: SRAGSGSRDVWLHCK*GVDPERWQLGLQQL
Trigger: TAATTGTTGAAGGCCCAGCTGCCACCGCTCTGGATCTACACCCCATTTGCAATGAAGCCACACATCTCGTGAGCCACTCCCAGCCCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS-3UTR CAA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGTCTAACCCTCGACACTaGGAGCGGCACGCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQSNPRH*ERHAFS
Trigger: AGAGAAAGCGTGCCGCTCCAAGTGTCGAGGGTTAGA...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR CAA 90 bp TGGAAACAACTTCTGCTGAGAAAGACCCAGCCAGGCTCCCACACTTGGCAGCAGGGGGTGGAGAAGACCTaGTTGCACTTCACACAGTGG +
Preference number: 5 (lower is better)
Translates to: WKQLLLRKTQPGSHTWQQGVEKT*LHFTQW
Trigger: CCACTGTGTGAAGTGCAACAAGGTCTTCTCCACCCC...CTGCTGCCAAGTGTGGGAGCCTGGCTGGGTCTTTCTCAGCAGAAGTTGTTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGTTGCGCTGGAAGCCTTaGGTGCACAGCTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWLRWKP*VHSSQL
Trigger: CAGCTGTGAGCTGTGCACCAAAGGCTTCCAGCGCAA...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp CTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGGCTAGAGGAAGGCACTaGAGCACACCTGGAAACAAC +
Preference number: 5 (lower is better)
Translates to: LVDSCPVPPPGDWRFGHVARGRH*STPGNN
Trigger: GTTGTTTCCAGGTGTGCTCAAGTGCCTTCCTCTAGC...CACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS-3UTR CAA 90 bp GTCGGAAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTTCAATCTGATTATTaGTGTCAAAATCTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: VGSRSQPAHLAEAEGVPGFQSDY*CQNLAV
Trigger: CACCGCCAGATTTTGACACAAATAATCAGATTGAAA...GCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTTCCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS-3UTR CAA 90 bp GGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGCATGTGAGGTGGAGAAGACCTTGTaGCACTTCACACAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: GRLLSSPTSRRLEIWACEVEKTL*HFTQWY
Trigger: GTACCACTGTGTGAAGTGCAACAAGGTCTTCTCCAC...CTCACATGCCCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS GCA 90 bp TATGGCCCCCTGGAAAGTGAGCAGTTGATGAGCTCTGCTTATGGCTaGTCTCCTCCATGGCAGAATGCATTCCTGCAGGATGAGGTCATG +
Preference number: 5 (lower is better)
Translates to: YGPLESEQLMSSAYG*SPPWQNAFLQDEVM
Trigger: CATGACCTCATCCTGCAGGAATGCATTCTGCCATGGAGGAGAGCAGCCATAAGCAGAGCTCATCAACTGCTCACTTTCCAGGGGGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS-3UTR CAA 90 bp AAGTCGGAGTCAGCCAGCACATCTGGCCGAAGCAGAGGGGGTGCCAGGCTTCTGTTTTCCAGATGCGAGTaGCAGGAAGTTTCAAAAAGA +
Preference number: 5 (lower is better)
Translates to: KSESASTSGRSRGGARLLFSRCE*QEVSKR
Trigger: TCTTTTTGAAACTTCCTGCAACTCGCATCTGGAAAA...CAGAAGCCTGGCACCCCCTCTGCTTCGGCCAGATGTGCTGGCTGACTCCGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS CCA 90 bp AGAGCGGTGGCAGCTGGGCCTTCAACAATTAGCAGAAAAGCTGAATaGCACATTTTTCATGGCCTCTGCAGAGACCTAAGCAGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: RAVAAGPSTISRKAE*HIFHGLCRDLSRPP
Trigger: AGGAGGCCTGCTTAGGTCTCTGCAGAGGCCATGAAAAATGTGCCATTCAGCTTTTCTGCTAATTGTTGAAGGCCCAGCTGCCACCGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524638.1
CDS CCA 90 bp GAAAGTGAGCAGTTGATGAGCTCTGCTTATGGCTGCTCTCCTCCATaGCAGAATGCATTCCTGCAGGATGAGGTCATGGAGCCAAGGAAG +
Preference number: 5 (lower is better)
Translates to: ESEQLMSSAYGCSPP*QNAFLQDEVMEPRK
Trigger: CTTCCTTGGCTCCATGACCTCATCCTGCAGGAATGCATTCTGCCATGGAGGAGAGCAGCCATAAGCAGAGCTCATCAACTGCTCACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS CCA 90 bp GCTGTCTCTGCCTGTCACCTTCAGCCTCTTCTTGCAAGCCCCTGGTaGTCCCATATTGAGGTAACAATGCCCATTCTTCTTCCAGACAGT +
Preference number: 5 (lower is better)
Translates to: AVSACHLQPLLASPW*SHIEVTMPILLPDS
Trigger: ACTGTCTGGAAGAAGAATGGGCATTGTTACCTCAATATGGGACCACCAGGGGCTTGCAAGAAGAGGCTGAAGGTGACAGGCAGAGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS CCA 90 bp AGAGCTGTCTCTGCCTGTCACCTTCAGCCTCTTCTTGCAAGCCCCTaGTGGTCCCATATTGAGGTAACAATGCCCATTCTTCTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: RAVSACHLQPLLASP*WSHIEVTMPILLPD
Trigger: GTCTGGAAGAAGAATGGGCATTGTTACCTCAATATGGGACCACCAGGGGCTTGCAAGAAGAGGCTGAAGGTGACAGGCAGAGACAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS-3UTR CAA 90 bp AAACAAGCTGGTAGACTCCTGTCCAGTCCCACCTCCAGGAGACTGGAGATTTGGGTGGAGAAGACCTTGTaGCACTTCACACAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: KQAGRLLSSPTSRRLEIWVEKTL*HFTQWY
Trigger: GTACCACTGTGTGAAGTGCAACAAGGTCTTCTCCAC...CCAAATCTCCAGTCTCCTGGAGGTGGGACTGGACAGGAGTCTACCAGCTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
ENST00000636263.1
CDS TCA 90 bp GACAGTGTAGAAACAGTGACAATGTGGTTATGGCCCCCTGGAAAGTaGGCAGTTGATGAGCTCTGCTTATGGCTGCTCTCCTCCATGGCA +
Preference number: 5 (lower is better)
Translates to: DSVETVTMWLWPPGK*AVDELCLWLLSSMA
Trigger: TGCCATGGAGGAGAGCAGCCATAAGCAGAGCTCATCAACTGCTCACTTTCCAGGGGGCCATAACCACATTGTCACTGTTTCTACACTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS CCA 90 bp AGAGCGGTGGCAGCTGGGCCTTCAACAATTAGCAGAAAAGCTGAATaGCACATTTTTCATGGCCTCTGCAGAGACCTGTTCAGAAGGCGA +
Preference number: 5 (lower is better)
Translates to: RAVAAGPSTISRKAE*HIFHGLCRDLFRRR
Trigger: TCGCCTTCTGAACAGGTCTCTGCAGAGGCCATGAAAAATGTGCCATTCAGCTTTTCTGCTAATTGTTGAAGGCCCAGCTGCCACCGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS CCA 90 bp CGAGATGTGTGGCTTCATTGCAAATGGGGTGTAGATCCAGAGCGGTaGCAGCTGGGCCTTCAACAATTAGCAGAAAAGCTGAATGGCACA +
Preference number: 5 (lower is better)
Translates to: RDVWLHCKWGVDPER*QLGLQQLAEKLNGT
Trigger: TGTGCCATTCAGCTTTTCTGCTAATTGTTGAAGGCCCAGCTGCCACCGCTCTGGATCTACACCCCATTTGCAATGAAGCCACACATCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS GCA 90 bp CTTCAAAATGCCTTTCATATCCCACAGTTCGACTTCATCTCACTCTaGCTCCTCTCACAGGGCTTTGTGTTCGTGCTGGATGGAGCCCAT +
Preference number: 5 (lower is better)
Translates to: LQNAFHIPQFDFISL*LLSQGFVFVLDGAH
Trigger: ATGGGCTCCATCCAGCACGAACACAAAGCCCTGTGAGAGGAGGCAGAGTGAGATGAAGTCGAACTGTGGGATATGAAAGGCATTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS TCA 90 bp CTGTCACCTTCAGCCTCTTCTTGCAAGCCCCTGGTGGTCCCATATTaGGGTAACAATGCCCATTCTTCTTCCAGACAGTGTAGAAACAGT +
Preference number: 5 (lower is better)
Translates to: LSPSASSCKPLVVPY*GNNAHSSSRQCRNS
Trigger: ACTGTTTCTACACTGTCTGGAAGAAGAATGGGCATTGTTACCTCAATATGGGACCACCAGGGGCTTGCAAGAAGAGGCTGAAGGTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS GCA 90 bp GCCTCTCTCGGGACTGGCCTCCACTCTGTCAACTGTGTGACTCTTTaGACAAATAGATACTTCTCCTTTTTGCTCTGTCTCTCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: ASLGTGLHSVNCVTL*TNRYFSFLLCLSVC
Trigger: ACACACAGAGAGACAGAGCAAAAAGGAGAAGTATCTATTTGTGCAAAGAGTCACACAGTTGACAGAGTGGAGGCCAGTCCCGAGAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339463.7
ENST00000636137.1
CDS TCA 90 bp ACTGCAAAGCCTCTCTCGGGACTGGCCTCCACTCTGTCAACTGTGTaGCTCTTTGCACAAATAGATACTTCTCCTTTTTGCTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: TAKPLSGLASTLSTV*LFAQIDTSPFCSVS
Trigger: AGAGACAGAGCAAAAAGGAGAAGTATCTATTTGTGCAAAGAGTCACACAGTTGACAGAGTGGAGGCCAGTCCCGAGAGAGGCTTTGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
CDS GCA 90 bp GTGAACAAGCAGCCAATGAAGAGAGCGCGGGAGCTCAGCCGTATTTaGTTATCAAAACTTTCCAGGACACAAGACTTCGAATTCTCATTT +
Preference number: 5 (lower is better)
Translates to: VNKQPMKRARELSRI*LSKLSRTQDFEFSF
Trigger: AAATGAGAATTCGAAGTCTTGTGTCCTGGAAAGTTTTGATAAGCAAATACGGCTGAGCTCCCGCGCTCTCTTCATTGGCTGCTTGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS CCA 90 bp GTCTCAGAAATCTCTGAAGATTTCAGAAATCTTGAATCCCTTCCCTaGTGTGAATGCAAAGGGAAGAGTCTGTTCAGGGCTTTGTGTTCG +
Preference number: 5 (lower is better)
Translates to: VSEISEDFRNLESLP*CECKGKSLFRALCS
Trigger: CGAACACAAAGCCCTGAACAGACTCTTCCCTTTGCATTCACACCAGGGAAGGGATTCAAGATTTCTGAAATCTTCAGAGATTTCTGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS CCA 90 bp TCCAGGACACAAGACTTCGAATTCTCATTTCTAACCCTCGACACTTaGAGCGGCACGCTTTCTCTATTTATAGTGGTACTATTCACAATA +
Preference number: 5 (lower is better)
Translates to: SRTQDFEFSFLTLDT*SGTLSLFIVVLFTI
Trigger: TATTGTGAATAGTACCACTATAAATAGAGAAAGCGTGCCGCTCCAAGTGTCGAGGGTTAGAAATGAGAATTCGAAGTCTTGTGTCCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS GCA 72 bp GGTGCAGGCTCAGGACTGGACCCGGCCGGGATCCCCTaGGGAACAGGACACTCCATTGGGGCGGCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: GAGSGLDPAGIP*GTGHSIGAAWE
Trigger: CTCCCAGGCCGCCCCAATGGAGTGTCCTGTTCCGCAGGGGATCCCGGCCGGGTCCAGTCCTGAGCCTGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636263.1
CDS CAA 72 bp GCCAGGAGCTGGGAGCCGGCGCAGCCTCACTTGAGATaGTGCTGGCTCTCGCGGTGCCGCCGCAGGTCCACC +
Preference number: 6 (lower is better)
Translates to: ARSWEPAQPHLR*CWLSRCRRRST
Trigger: GGTGGACCTGCGGCGGCACCGCGAGAGCCAGCACAATCTCAAGTGAGGCTGCGCCGGCTCCCAGCTCCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS GCA 72 bp CCGCCGTCGGCCTTGGCCCTTTCACGACGGGGGAGGTaGTGTACGTCCAAGATGGCGGCGCCCTGTAGGCTG +
Preference number: 6 (lower is better)
Translates to: PPSALALSRRGR*CTSKMAAPCRL
Trigger: CAGCCTACAGGGCGCCGCCATCTTGGACGTACAGCACCTCCCCCGTCGTGAAAGGGCCAAGGCCGACGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS CCA 72 bp AGCTGGGAGCCGGCGCAGCCTCACTTGAGATTGTGCTaGCTCTCGCGGTGCCGCCGCAGGTCCACCTTGCGC +
Preference number: 6 (lower is better)
Translates to: SWEPAQPHLRLC*LSRCRRRSTLR
Trigger: GCGCAAGGTGGACCTGCGGCGGCACCGCGAGAGCCAGCACAATCTCAAGTGAGGCTGCGCCGGCTCCCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS GCA 72 bp CCCACACCTGTCCGGAGCTGTCCCTCGCCTGGGTTCTaGCGGAGCTTCCCGAGGTGGGAACTGCAAAGCCTC +
Preference number: 6 (lower is better)
Translates to: PTPVRSCPSPGF*RSFPRWELQSL
Trigger: GAGGCTTTGCAGTTCCCACCTCGGGAAGCTCCGGCAGAACCCAGGCGAGGGACAGCTCCGGACAGGTGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS CCA 72 bp TGTGCACCCCACACCTGTCCGGAGCTGTCCCTCGCCTaGGTTCTGCCGGAGCTTCCCGAGGTGGGAACTGCA +
Preference number: 6 (lower is better)
Translates to: CAPHTCPELSLA*VLPELPEVGTA
Trigger: TGCAGTTCCCACCTCGGGAAGCTCCGGCAGAACCCAGGCGAGGGACAGCTCCGGACAGGTGTGGGGTGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS CCA 72 bp ACAGCACAATGGGGCCCTCTGGTGCCGGGGCCATCCTaGCCAAGTTCTGGTCCTGCTCCAGCTCCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: TAQWGPLVPGPS*PSSGPAPAPAL
Trigger: GAGAGCCGGAGCTGGAGCAGGACCAGAACTTGGCCAGGATGGCCCCGGCACCAGAGGGCCCCATTGTGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS CCA 72 bp GGGACTCTTTTTCGTGGCGGAGGCCGCCGTCGGCCTTaGCCCTTTCACGACGGGGGAGGTGCTGTACGTCCA +
Preference number: 6 (lower is better)
Translates to: GTLFRGGGRRRP*PFHDGGGAVRP
Trigger: TGGACGTACAGCACCTCCCCCGTCGTGAAAGGGCCAAGGCCGACGGCGGCCTCCGCCACGAAAAAGAGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS GCA 72 bp CGCCTGGGTTCTGCCGGAGCTTCCCGAGGTGGGAACTaGAAAGCCTCTCTCGGGACTGGCCTCCACTCTGTC +
Preference number: 6 (lower is better)
Translates to: RLGSAGASRGGN*KASLGTGLHSV
Trigger: GACAGAGTGGAGGCCAGTCCCGAGAGAGGCTTTGCAGTTCCCACCTCGGGAAGCTCCGGCAGAACCCAGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS CCA 72 bp TGTCCCTCGCCTGGGTTCTGCCGGAGCTTCCCGAGGTaGGAACTGCAAAGCCTCTCTCGGGACTGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: CPSPGFCRSFPR*ELQSLSRDWPP
Trigger: TGGAGGCCAGTCCCGAGAGAGGCTTTGCAGTTCCCACCTCGGGAAGCTCCGGCAGAACCCAGGCGAGGGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS CCA 72 bp CCTCCACCACGTGCATCCTGTCAGCACGCCCGCCTATaGAGGGCTCAGCCCTTTCATGCTCAGACAGGCCGG +
Preference number: 6 (lower is better)
Translates to: PPPRASCQHARL*RAQPFHAQTGR
Trigger: CCGGCCTGTCTGAGCATGAAAGGGCTGAGCCCTCCATAGGCGGGCGTGCTGACAGGATGCACGTGGTGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS CAA 72 bp TTGTGCTGGCTCTCGCGGTGCCGCCGCAGGTCCACCTaGCGCTGGAAGCCTTTGGTGCACAGCTCACAGCTG +
Preference number: 6 (lower is better)
Translates to: LCWLSRCRRRST*RWKPLVHSSQL
Trigger: CAGCTGTGAGCTGTGCACCAAAGGCTTCCAGCGCAAGGTGGACCTGCGGCGGCACCGCGAGAGCCAGCACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS GCA 72 bp TCTGGTGCCGGGGCCATCCTGGCCAAGTTCTGGTCCTaGTCCAGCTCCGGCTCTCGTTTGAGGTTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: SGAGAILAKFWS*SSSGSRLRLVQ
Trigger: CTGGACCAACCTCAAACGAGAGCCGGAGCTGGAGCAGGACCAGAACTTGGCCAGGATGGCCCCGGCACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS GCA 72 bp CCTCCTCAGAGCTATCCTGCGTTAGGGCCCCTGCTGTaGCCAGTCACGGGCTGGGAGTGGCTCACGAGATGT +
Preference number: 6 (lower is better)
Translates to: PPQSYPALGPLL*PVTGWEWLTRC
Trigger: ACATCTCGTGAGCCACTCCCAGCCCGTGACTGGGCACAGCAGGGGCCCTAACGCAGGATAGCTCTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS GCA 72 bp CACTGTCAAGGGTCCCACACCTCCTCAGAGCTATCCTaGGTTAGGGCCCCTGCTGTGCCCAGTCACGGGCTG +
Preference number: 6 (lower is better)
Translates to: HCQGSHTSSELS*VRAPAVPSHGL
Trigger: CAGCCCGTGACTGGGCACAGCAGGGGCCCTAACGCAGGATAGCTCTGAGGAGGTGTGGGACCCTTGACAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS CCA 72 bp CCCTTTCACGACGGGGGAGGTGCTGTACGTCCAAGATaGCGGCGCCCTGTAGGCTGGAGGGACTGTGAGGTA +
Preference number: 6 (lower is better)
Translates to: PFHDGGGAVRPR*RRPVGWRDCEV
Trigger: TACCTCACAGTCCCTCCAGCCTACAGGGCGCCGCCATCTTGGACGTACAGCACCTCCCCCGTCGTGAAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS TCA 72 bp AGTGGTACGCATCCATGCCTGGGGAGTAGCGGAGGCTaGAGTCCAAGGCGGGCTCAGTGCTGGGCACAAGAG +
Preference number: 6 (lower is better)
Translates to: SGTHPCLGSSGG*SPRRAQCWAQE
Trigger: CTCTTGTGCCCAGCACTGAGCCCGCCTTGGACTTCAGCCTCCGCTACTCCCCAGGCATGGATGCGTACCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS CAA 90 bp CAGTCCAGGCACTGGTTTGGGAATAGAGTGCTAAGGACAGGGCTGTaGCTTGGAGCCTGGTCTCTGGGCACCGGGGTAAGGGCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: QSRHWFGNRVLRTGL*LGAWSLGTGVRAGG
Trigger: GCCTCCTGCCCTTACCCCGGTGCCCAGAGACCAGGCTCCAAGCAACAGCCCTGTCCTTAGCACTCTATTCCCAAACCAGTGCCTGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS CCA 72 bp TTAGGGCCCCTGCTGTGCCCAGTCACGGGCTGGGAGTaGCTCACGAGATGTGTGGCTTCATTGCAAATGGGG +
Preference number: 6 (lower is better)
Translates to: LGPLLCPVTGWE*LTRCVASLQMG
Trigger: CCCCATTTGCAATGAAGCCACACATCTCGTGAGCCACTCCCAGCCCGTGACTGGGCACAGCAGGGGCCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS GCA 72 bp TCACACAGCCAAATGCAGCAGATGTCCTCCACCACGTaGATCCTGTCAGCACGCCCGCCTATGGAGGGCTCA +
Preference number: 6 (lower is better)
Translates to: SHSQMQQMSSTT*ILSARPPMEGS
Trigger: TGAGCCCTCCATAGGCGGGCGTGCTGACAGGATGCACGTGGTGGAGGACATCTGCTGCATTTGGCTGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS GCA 72 bp CGGGCTGGGAGTGGCTCACGAGATGTGTGGCTTCATTaGAAATGGGGTGTAGATCCAGAGCGGTGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: RAGSGSRDVWLH*KWGVDPERWQL
Trigger: CAGCTGCCACCGCTCTGGATCTACACCCCATTTGCAATGAAGCCACACATCTCGTGAGCCACTCCCAGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS CCA 72 bp CTTGTTGCACTTCACACAGTGGTACGCATCCATGCCTaGGGAGTAGCGGAGGCTGAAGTCCAAGGCGGGCTC +
Preference number: 6 (lower is better)
Translates to: LVALHTVVRIHA*GVAEAEVQGGL
Trigger: GAGCCCGCCTTGGACTTCAGCCTCCGCTACTCCCCAGGCATGGATGCGTACCACTGTGTGAAGTGCAACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS CCA 72 bp GGTGCTGTACGTCCAAGATGGCGGCGCCCTGTAGGCTaGAGGGACTGTGAGGTAAACAGCTGGATTCGGTGT +
Preference number: 6 (lower is better)
Translates to: GAVRPRWRRPVG*RDCEVNSWIRC
Trigger: ACACCGAATCCAGCTGTTTACCTCACAGTCCCTCCAGCCTACAGGGCGCCGCCATCTTGGACGTACAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS CAA 72 bp CCTTCCTCTCTGTGGCCACAGCTGCTCCTTGCTGGTTaGGGCATGCCGGCTTCCTCAGCAAGGCTCCTAGTA +
Preference number: 6 (lower is better)
Translates to: PSSLWPQLLLAG*GMPASSARLLV
Trigger: TACTAGGAGCCTTGCTGAGGAAGCCGGCATGCCCAAACCAGCAAGGAGCAGCTGTGGCCACAGAGAGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524638.1
CDS CAA 90 bp GCCATCCTGGCCAAGTTCTGGTCCTGCTCCAGCTCCGGCTCTCGTTaGAGGTTGGTCCAGTCCAGGCACTGGTTTGGGAATAGAGTGCTA +
Preference number: 6 (lower is better)
Translates to: AILAKFWSCSSSGSR*RLVQSRHWFGNRVL
Trigger: TAGCACTCTATTCCCAAACCAGTGCCTGGACTGGACCAACCTCAAACGAGAGCCGGAGCTGGAGCAGGACCAGAACTTGGCCAGGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS TCA 72 bp TCCAAGATGGCGGCGCCCTGTAGGCTGGAGGGACTGTaGGGTAAACAGCTGGATTCGGTGTCTCCGCTGAAA +
Preference number: 6 (lower is better)
Translates to: SKMAAPCRLEGL*GKQLDSVSPLK
Trigger: TTTCAGCGGAGACACCGAATCCAGCTGTTTACCTCACAGTCCCTCCAGCCTACAGGGCGCCGCCATCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS CCA 72 bp GGGAGTGGCTCACGAGATGTGTGGCTTCATTGCAAATaGGGTGTAGATCCAGAGCGGTGGCAGCTGGGCCTT +
Preference number: 6 (lower is better)
Translates to: GSGSRDVWLHCK*GVDPERWQLGL
Trigger: AAGGCCCAGCTGCCACCGCTCTGGATCTACACCCCATTTGCAATGAAGCCACACATCTCGTGAGCCACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS CAA 72 bp GCCAAGTTCTGGTCCTGCTCCAGCTCCGGCTCTCGTTaGAGGTTGGTCCAGTCCAGGCACTGGTTTGGGAAT +
Preference number: 6 (lower is better)
Translates to: AKFWSCSSSGSR*RLVQSRHWFGN
Trigger: ATTCCCAAACCAGTGCCTGGACTGGACCAACCTCAAACGAGAGCCGGAGCTGGAGCAGGACCAGAACTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS CAA 90 bp CTGGCCAAGTTCTGGTCCTGCTCCAGCTCCGGCTCTCGTTTGAGGTaGGTCCAGTCCAGGCACTGGTTTGGGAATAGAGTGCTAAGGACA +
Preference number: 6 (lower is better)
Translates to: LAKFWSCSSSGSRLR*VQSRHWFGNRVLRT
Trigger: TGTCCTTAGCACTCTATTCCCAAACCAGTGCCTGGACTGGACCAACCTCAAACGAGAGCCGGAGCTGGAGCAGGACCAGAACTTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS TCA 72 bp CCAAGTTCTGGTCCTGCTCCAGCTCCGGCTCTCGTTTaGGGTTGGTCCAGTCCAGGCACTGGTTTGGGAATA +
Preference number: 6 (lower is better)
Translates to: PSSGPAPAPALV*GWSSPGTGLGI
Trigger: TATTCCCAAACCAGTGCCTGGACTGGACCAACCTCAAACGAGAGCCGGAGCTGGAGCAGGACCAGAACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS GCA 72 bp GTTCAGAAGGCGAGGGGGAGATGTCACACAGCCAAATaGAGCAGATGTCCTCCACCACGTGCATCCTGTCAG +
Preference number: 6 (lower is better)
Translates to: VQKARGRCHTAK*SRCPPPRASCQ
Trigger: CTGACAGGATGCACGTGGTGGAGGACATCTGCTGCATTTGGCTGTGTGACATCTCCCCCTCGCCTTCTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS CCA 72 bp TTCCCGAGGTGGGAACTGCAAAGCCTCTCTCGGGACTaGCCTCCACTCTGTCAACTGTGTGACTCTTTGCAC +
Preference number: 6 (lower is better)
Translates to: FPRWELQSLSRD*PPLCQLCDSLH
Trigger: GTGCAAAGAGTCACACAGTTGACAGAGTGGAGGCCAGTCCCGAGAGAGGCTTTGCAGTTCCCACCTCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
CDS CAA 72 bp TTCTGGTCCTGCTCCAGCTCCGGCTCTCGTTTGAGGTaGGTCCAGTCCAGGCACTGGTTTGGGAATAGAGTG +
Preference number: 6 (lower is better)
Translates to: FWSCSSSGSRLR*VQSRHWFGNRV
Trigger: CACTCTATTCCCAAACCAGTGCCTGGACTGGACCAACCTCAAACGAGAGCCGGAGCTGGAGCAGGACCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS CCA 72 bp TCCGGCTCTCGTTTGAGGTTGGTCCAGTCCAGGCACTaGTTTGGGAATAGAGTGCTAAGGACAGGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: SGSRLRLVQSRH*FGNRVLRTGLL
Trigger: CAACAGCCCTGTCCTTAGCACTCTATTCCCAAACCAGTGCCTGGACTGGACCAACCTCAAACGAGAGCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000372123.5
ENST00000636137.1
ENST00000636263.1
CDS TCA 72 bp GAGGAGGAGCTGGACAGCAGAGAGAGCCTTCAGCTATaGTATGGATCTGAAACCTGTGAGGAGAGGGGGACT +
Preference number: 6 (lower is better)
Translates to: EEELDSRESLQL*YGSETCEERGT
Trigger: AGTCCCCCTCTCCTCACAGGTTTCAGATCCATATCATAGCTGAAGGCTCTCTCTGCTGTCCAGCTCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS TCA 72 bp GGAGGATGGCTTGAACCTAGGTGTTCCAGGTTGCACTaGGCTATGATCAGGCCACTGTACTCTAGTCTGGAC +
Preference number: 6 (lower is better)
Translates to: GGWLEPRCSRLH*AMIRPLYSSLD
Trigger: GTCCAGACTAGAGTACAGTGGCCTGATCATAGCTCAGTGCAACCTGGAACACCTAGGTTCAAGCCATCCTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS GCA 72 bp AGCAGAAAAGCTGAATGGCACATTTTTCATGGCCTCTaGAGAGACCTAAGCAGGCCTCCTGGGCAATGGGCT +
Preference number: 6 (lower is better)
Translates to: SRKAEWHIFHGL*RDLSRPPGQWA
Trigger: AGCCCATTGCCCAGGAGGCCTGCTTAGGTCTCTGCAGAGGCCATGAAAAATGTGCCATTCAGCTTTTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524638.1
CDS GCA 72 bp GCCTTTCATATCCCACAGTTCGACTTCATCTCACTCTaGCTCCTCTCACAGGGCTTTGTGTTCGTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: AFHIPQFDFISL*LLSQGFVFVLD
Trigger: ATCCAGCACGAACACAAAGCCCTGTGAGAGGAGGCAGAGTGAGATGAAGTCGAACTGTGGGATATGAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS GCA 72 bp TGCAAAGGGAAGAGTCTGTTCAGGGCTTTGTGTTCGTaGTGGATGGAGCCCATCATACTCAGCCTCGCAATA +
Preference number: 6 (lower is better)
Translates to: CKGKSLFRALCS*WMEPIILSLAI
Trigger: TATTGCGAGGCTGAGTATGATGGGCTCCATCCAGCACGAACACAAAGCCCTGAACAGACTCTTCCCTTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS GCA 72 bp CTGGAAAGTGAGCAGTTGATGAGCTCTGCTTATGGCTaGTCTCCTCCATGGCAGAATGCATTCCTGCAGGAT +
Preference number: 6 (lower is better)
Translates to: LESEQLMSSAYG*SPPWQNAFLQD
Trigger: ATCCTGCAGGAATGCATTCTGCCATGGAGGAGAGCAGCCATAAGCAGAGCTCATCAACTGCTCACTTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS CCA 72 bp TGGCTTCATTGCAAATGGGGTGTAGATCCAGAGCGGTaGCAGCTGGGCCTTCAACAATTAGCAGAAAAGCTG +
Preference number: 6 (lower is better)
Translates to: WLHCKWGVDPER*QLGLQQLAEKL
Trigger: CAGCTTTTCTGCTAATTGTTGAAGGCCCAGCTGCCACCGCTCTGGATCTACACCCCATTTGCAATGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS CCA 72 bp GCCTGTCACCTTCAGCCTCTTCTTGCAAGCCCCTGGTaGTCCCATATTGAGGTAACAATGCCCATTCTTCTT +
Preference number: 6 (lower is better)
Translates to: ACHLQPLLASPW*SHIEVTMPILL
Trigger: AAGAAGAATGGGCATTGTTACCTCAATATGGGACCACCAGGGGCTTGCAAGAAGAGGCTGAAGGTGACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS CCA 72 bp TCTGCCTGTCACCTTCAGCCTCTTCTTGCAAGCCCCTaGTGGTCCCATATTGAGGTAACAATGCCCATTCTT +
Preference number: 6 (lower is better)
Translates to: SACHLQPLLASP*WSHIEVTMPIL
Trigger: AAGAATGGGCATTGTTACCTCAATATGGGACCACCAGGGGCTTGCAAGAAGAGGCTGAAGGTGACAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS TCA 72 bp AGGCACGAGCTGCTGTGCCCAGCCAGGGACACATCTTaGGTATTCTTTAGGACAAAAATCTCAGCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: RHELLCPARDTS*VFFRTKISASE
Trigger: CTCTGAAGCTGAGATTTTTGTCCTAAAGAATACTCAAGATGTGTCCCTGGCTGGGCACAGCAGCTCGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS CCA 72 bp AAAGGGAAGAGTCTGTTCAGGGCTTTGTGTTCGTGCTaGATGGAGCCCATCATACTCAGCCTCGCAATAAAG +
Preference number: 6 (lower is better)
Translates to: KGKSLFRALCSC*MEPIILSLAIK
Trigger: CTTTATTGCGAGGCTGAGTATGATGGGCTCCATCCAGCACGAACACAAAGCCCTGAACAGACTCTTCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS CAA 72 bp GCAGCCAATGAAGAGAGCGCGGGAGCTCAGCCGTATTaGCTTATCAAAACTTTCCAGGACACAAGACTTCGA +
Preference number: 6 (lower is better)
Translates to: AANEESAGAQPY*LIKTFQDTRLR
Trigger: TCGAAGTCTTGTGTCCTGGAAAGTTTTGATAAGCAAATACGGCTGAGCTCCCGCGCTCTCTTCATTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS TCA 72 bp CCTCTCTCGGGACTGGCCTCCACTCTGTCAACTGTGTaGCTCTTTGCACAAATAGATACTTCTCCTTTTTGC +
Preference number: 6 (lower is better)
Translates to: PLSGLASTLSTV*LFAQIDTSPFC
Trigger: GCAAAAAGGAGAAGTATCTATTTGTGCAAAGAGTCACACAGTTGACAGAGTGGAGGCCAGTCCCGAGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339463.7
ENST00000372122.4
ENST00000636137.1
CDS GCA 72 bp CAGCCAATGAAGAGAGCGCGGGAGCTCAGCCGTATTTaGTTATCAAAACTTTCCAGGACACAAGACTTCGAA +
Preference number: 6 (lower is better)
Translates to: QPMKRARELSRI*LSKLSRTQDFE
Trigger: TTCGAAGTCTTGTGTCCTGGAAAGTTTTGATAAGCAAATACGGCTGAGCTCCCGCGCTCTCTTCATTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS CCA 72 bp GCAGCTGGGCCTTCAACAATTAGCAGAAAAGCTGAATaGCACATTTTTCATGGCCTCTGCAGAGACCTGTTC +
Preference number: 6 (lower is better)
Translates to: AAGPSTISRKAE*HIFHGLCRDLF
Trigger: GAACAGGTCTCTGCAGAGGCCATGAAAAATGTGCCATTCAGCTTTTCTGCTAATTGTTGAAGGCCCAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443690.3
CDS CCA 72 bp GCAGCTGGGCCTTCAACAATTAGCAGAAAAGCTGAATaGCACATTTTTCATGGCCTCTGCAGAGACCTAAGC +
Preference number: 6 (lower is better)
Translates to: AAGPSTISRKAE*HIFHGLCRDLS
Trigger: GCTTAGGTCTCTGCAGAGGCCATGAAAAATGTGCCATTCAGCTTTTCTGCTAATTGTTGAAGGCCCAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524638.1
CDS CAA 90 bp GGTGAACAAGCAGCCAATGAAGAGAGCGCGGGAGCTCAGCCGTATTaGCTTATCAAAACTTTCCAGGACACAAGACTTCGAATTCTCATT +
Preference number: 6 (lower is better)
Translates to: GEQAANEESAGAQPY*LIKTFQDTRLRILI
Trigger: AATGAGAATTCGAAGTCTTGTGTCCTGGAAAGTTTTGATAAGCAAATACGGCTGAGCTCCCGCGCTCTCTTCATTGGCTGCTTGTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS GCA 72 bp CGAACAAAAACCAGCCTGATGCCTACTCCTTCAAAATaGCTTTCATATCCCACAGTTCGACTTCATCTCACT +
Preference number: 6 (lower is better)
Translates to: RTKTSLMPTPSK*LSYPTVRLHLT
Trigger: AGTGAGATGAAGTCGAACTGTGGGATATGAAAGGCATTTTGAAGGAGTAGGCATCAGGCTGGTTTTTGTTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS GCA 72 bp GAGATAATAAACTGGGAGAAGAGTCTCAGACTGCTTTaGAGTTCCAAGAGAGGTTTGATCAGGTCGATGAAG +
Preference number: 6 (lower is better)
Translates to: EIINWEKSLRLL*SSKRGLIRSMK
Trigger: CTTCATCGACCTGATCAAACCTCTCTTGGAACTGCAAAGCAGTCTGAGACTCTTCTCCCAGTTTATTATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS CCA 72 bp ATCTCTGAAGATTTCAGAAATCTTGAATCCCTTCCCTaGTGTGAATGCAAAGGGAAGAGTCTGTTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: ISEDFRNLESLP*CECKGKSLFRA
Trigger: AGCCCTGAACAGACTCTTCCCTTTGCATTCACACCAGGGAAGGGATTCAAGATTTCTGAAATCTTCAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631293.1
CDS CAA 72 bp GGAGATAATAAACTGGGAGAAGAGTCTCAGACTGCTTaGCAGTTCCAAGAGAGGTTTGATCAGGTCGATGAA +
Preference number: 6 (lower is better)
Translates to: GDNKLGEESQTA*QFQERFDQVDE
Trigger: TTCATCGACCTGATCAAACCTCTCTTGGAACTGCAAAGCAGTCTGAGACTCTTCTCCCAGTTTATTATCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443690.3
ENST00000524638.1
CDS CCA 72 bp CAAGACTTCGAATTCTCATTTCTAACCCTCGACACTTaGAGCGGCACGCTTTCTCTATTTATAGTGGTACTA +
Preference number: 6 (lower is better)
Translates to: QDFEFSFLTLDT*SGTLSLFIVVL
Trigger: TAGTACCACTATAAATAGAGAAAGCGTGCCGCTCCAAGTGTCGAGGGTTAGAAATGAGAATTCGAAGTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS CAA 72 bp ACAAGACTTCGAATTCTCATTTCTAACCCTCGACACTaGGAGCGGCACGCTTTCTCTATTTATAGTGGTACT +
Preference number: 6 (lower is better)
Translates to: TRLRILISNPRH*ERHAFSIYSGT
Trigger: AGTACCACTATAAATAGAGAAAGCGTGCCGCTCCAAGTGTCGAGGGTTAGAAATGAGAATTCGAAGTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339463.7
CDS CAA 90 bp TTCCAGGACACAAGACTTCGAATTCTCATTTCTAACCCTCGACACTaGGAGCGGCACGCTTTCTCTATTTATAGTGGTACTATTCACAAT +
Preference number: 6 (lower is better)
Translates to: FQDTRLRILISNPRH*ERHAFSIYSGTIHN
Trigger: ATTGTGAATAGTACCACTATAAATAGAGAAAGCGTGCCGCTCCAAGTGTCGAGGGTTAGAAATGAGAATTCGAAGTCTTGTGTCCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339463.7