RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GFAP (Homo sapiens)

Ensembl gene IDs: ENSG00000131095

Ensembl transcript IDs: ENST00000253408.10, ENST00000253408.11, ENST00000376990.8, ENST00000435360.7, ENST00000435360.8, ENST00000441312.2, ENST00000585543.6, ENST00000585728.5, ENST00000586125.2, ENST00000586127.6, ENST00000586793.6, ENST00000587997.6, ENST00000588037.1, ENST00000588316.1, ENST00000588640.5, ENST00000588735.3, ENST00000588957.5, ENST00000589701.2, ENST00000591327.2, ENST00000591719.5, ENST00000591880.2, ENST00000592065.2, ENST00000592320.6, ENST00000592706.5, ENST00000593179.1, ENST00000638281.1, ENST00000638304.1, ENST00000638400.1, ENST00000638488.1, ENST00000638618.1, ENST00000638921.1, ENST00000639042.1, ENST00000639243.1, ENST00000639277.1, ENST00000639369.1, ENST00000639921.1, ENST00000640545.1, ENST00000640552.1, ENST00000640859.1

Found 1653 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGCGGAGTGCGTGGGGAGCAGTGGCGCATCGGCCTCTGCTACCTaGAGAGCCCAGACCTCTCCCCACGCTACCTCAAGGCCGTGCCCG +
Preference number: 1 (lower is better)
Translates to: AAECVGSSGASASAT*RAQTSPHATSRPCP
Trigger: CGGGCACGGCCTTGAGGTAGCGTGGGGAGAGGTCTGGGCTCTGCAGGTAGCAGAGGCCGATGCGCCACTGCTCCCCACGCACTCCGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR GCA 90 bp TGTGACCGCTGCGGAGTGCGTGGGGAGCAGTGGCGCATCGGCCTCTaGTACCTGCAGAGCCCAGACCTCTCCCCACGCTACCTCAAGGCC +
Preference number: 1 (lower is better)
Translates to: CDRCGVRGEQWRIGL*YLQSPDLSPRYLKA
Trigger: GGCCTTGAGGTAGCGTGGGGAGAGGTCTGGGCTCTGCAGGTAGCAGAGGCCGATGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR TCA 90 bp TGGGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTaGCCGCTGCGGAGTGCGTGGGGAGCAGTGGCGCATCGGCCTCTG +
Preference number: 1 (lower is better)
Translates to: WAPPCLHHLLGMDPL*PLRSAWGAVAHRPL
Trigger: CAGAGGCCGATGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR GCA 90 bp GCCTCAAGGCCGTGCCCGATGTGGTGTCTTGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCAAGGCCAGGGACCACACGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: ASRPCPMWCLVAQGL*QGSCGPRPGTTRLR
Trigger: CCTCAGGCGTGTGGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640859.1
3UTR CCA 90 bp AGGTCAAGGACTGCAACTGGCGCCGGTAGTCGTTGGCTTCGTGCTTaGCCTGGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCA +
Preference number: 1 (lower is better)
Translates to: RSRTATGAGSRWLRA*PGGAAPRCGQQRLS
Trigger: TGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAACGACTACCGGCGCCAGTTGCAGTCCTTGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR TCA 90 bp CAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTaGGACAGAGGCTGCTGCTTGCTCAGAGGCCCCAGAGCAGCTCCA +
Preference number: 1 (lower is better)
Translates to: QAQRDPRGPPSDRKR*DRGCCLLRGPRAAP
Trigger: TGGAGCTGCTCTGGGGCCTCTGAGCAAGCAGCAGCCTCTGTCTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR TCA 90 bp CCAGCAGAGGCGGAGCAACTATCCTGCTTCTGCTCGGGCCCCTCATaGGACGGGGCAGAGGCCACCAGGTGGGTCCTGCCTCACATCACA +
Preference number: 1 (lower is better)
Translates to: PAEAEQLSCFCSGPS*DGAEATRWVLPHIT
Trigger: TGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTGCCCCGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGCCTCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR GCA 90 bp TCCCACCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTaGACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGC +
Preference number: 1 (lower is better)
Translates to: SHQSAHQSAQSKQSG*TGVDVSALSTRPPG
Trigger: GCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR GCA 90 bp GGGCCATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCATaGAGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACA +
Preference number: 1 (lower is better)
Translates to: GPWTHHLLSWGPARA*SGLGQRPPAPLPHT
Trigger: TGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACTGCATGCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR GCA 90 bp ACCTCAAGGCCGTGCCCGATGTGGTGTCTTGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCAAGGCCAGGGACCACACGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: TSRPCPMWCLVAQGL*QGSCGPRPGTTRLR
Trigger: CCTCAGGCGTGTGGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR GCA 90 bp CTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTaGGGAGTGCGTGGGGAGCAGTGGCGCATCGGCCTCTGCTACCTG +
Preference number: 1 (lower is better)
Translates to: LHVFTTFWEWTPCDR*GVRGEQWRIGLCYL
Trigger: CAGGTAGCAGAGGCCGATGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR CCA 90 bp CCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTGCACTaGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: PVCSPVCSVKAEWVH*GGRVSPEHPASRLQ
Trigger: CTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 90 bp CCTCTCCCCACGCTACCTCAAGGCCGTGCCCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAAGGCCAGGGA +
Preference number: 1 (lower is better)
Translates to: PLPTLPQGRARCGVL*LKGCAKEAADQGQG
Trigger: TCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGTAGCGTGGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR GCA 90 bp TGCCCGATGTGGTGTCTTGTGGCTCAAGGGCTGTGCCAAGGAAGCTaGGGACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGA +
Preference number: 1 (lower is better)
Translates to: CPMWCLVAQGLCQGS*GPRPGTTRLRCWFG
Trigger: TCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR GCA 90 bp GCTACCTGCAGAGCCCAGACCTCTCCCCACGCTACCTCAAGGCCGTaGCCGATGTGGTGTCTTGTGGCTCAAGGGCTGTGCCAAGGAAGC +
Preference number: 1 (lower is better)
Translates to: ATCRAQTSPHATSRP*PMWCLVAQGLCQGS
Trigger: GCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGTAGCGTGGGGAGAGGTCTGGGCTCTGCAGGTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR GCA 90 bp TTCTCAAGGCCGTGCCCGATGTGGTGTCTTGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCAAGGCCAGGGACCACACGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: FSRPCPMWCLVAQGL*QGSCGPRPGTTRLR
Trigger: CCTCAGGCGTGTGGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
3UTR GCA 90 bp AGCGCTGCAGTGTCACGAAGGCCCCCAGGGAGAGCTGGATCCCTTTaGCCTGATCCTCAGTCCCAGTCTGGAGCAACCTACAGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: SAAVSRRPPGRAGSL*PDPQSQSGATYRPW
Trigger: CCAGGGCCTGTAGGTTGCTCCAGACTGGGACTGAGGATCAGGGCAAAGGGATCCAGCTCTCCCTGGGGGCCTTCGTGACACTGCAGCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR CCA 90 bp CAGATCCCACCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTaGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCC +
Preference number: 1 (lower is better)
Translates to: QIPPVCSPVCSVKAE*VHWGGRVSPEHPAS
Trigger: GGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGGGATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 90 bp GGGAAGCCTGGGAAGAGGGAACTCAGGGGGATTGGGAGGATGGGGTaGGTGAGGCTCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCT +
Preference number: 1 (lower is better)
Translates to: GKPGKRELRGIGRMG*VRLTPCQAGQSAVS
Trigger: AGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGAGCCTCACCCACCCCATCCTCCCAATCCCCCTGAGTTCCCTCTTCCCAGGCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR CCA 90 bp CCATGGCCTGGCCTTGAGAATCCCTGGGGCCAGCCAGAGCCTGACTaGGCCCAAATCCCTCCTTACCTCTCCATCCCGCATCTCCACGGT +
Preference number: 1 (lower is better)
Translates to: PWPGLENPWGQPEPD*AQIPPYLSIPHLHG
Trigger: ACCGTGGAGATGCGGGATGGAGAGGTAAGGAGGGATTTGGGCCCAGTCAGGCTCTGGCTGGCCCCAGGGATTCTCAAGGCCAGGCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR CCA 90 bp GTTCCACCAGCAGAGACTGGGCCATGGACTCATCATCTCCTGTCCTaGGGCCCGGCCAGAGCATGCAGTGGCCTGGGACAAAGACCGCCA +
Preference number: 1 (lower is better)
Translates to: VPPAETGPWTHHLLS*GPARACSGLGQRPP
Trigger: TGGCGGTCTTTGTCCCAGGCCACTGCATGCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGCTGGTGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR CCA 90 bp CCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAAAGTaGGCAGCCGGCCCTGGGTGCCCCAGGTGCCCATTCAGTTCCACC +
Preference number: 1 (lower is better)
Translates to: PSGRACWPSLTMCPK*AAGPGCPRCPFSST
Trigger: GGTGGAACTGAATGGGCACCTGGGGCACCCAGGGCCGGCTGCCCACTTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR CCA 90 bp AGAGCCCAGACCTCTCCCCACGCTACCTCAAGGCCGTGCCCGATGTaGTGTCTTGTGGCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCA +
Preference number: 1 (lower is better)
Translates to: RAQTSPHATSRPCPM*CLVAQGLCQGSCGP
Trigger: TGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGTAGCGTGGGGAGAGGTCTGGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR CCA 90 bp GGTGAGCGCCAGTGTTCTCAAGGCCGTGCCCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAAGGCCAGGGA +
Preference number: 1 (lower is better)
Translates to: GERQCSQGRARCGVL*LKGCAKEAADQGQG
Trigger: TCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGAACACTGGCGCTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
3UTR TCA 90 bp AGCCTGGGAAGAGGGAACTCAGGGGGATTGGGAGGATGGGGTGGGTaGGGCTCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGA +
Preference number: 1 (lower is better)
Translates to: SLGRGNSGGLGGWGG*GSLPVKLGKAPCLR
Trigger: TCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGAGCCTCACCCACCCCATCCTCCCAATCCCCCTGAGTTCCCTCTTCCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR TCA 90 bp GGCTGTGCCAAGGAAGCTGCGGACCAAGGCCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTGCTTAGTACCCTGAAGGGTGTCAAC +
Preference number: 1 (lower is better)
Translates to: GCAKEAADQGQGPHA*GAGSELLSTLKGVN
Trigger: GTTGACACCCTTCAGGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639369.1
ENST00000640859.1
3UTR TCA 90 bp GAGGGGGCAGGACTCCAGTGCCCTTCCCACGAGGCCCTGCTGTACTaGCCTCGAATCTGCAGGTTGGAGAAGGTCTGCACGGGAATGGTG +
Preference number: 1 (lower is better)
Translates to: EGAGLQCPSHEALLY*PRICRLEKVCTGMV
Trigger: CACCATTCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGGTCAGTACAGCAGGGCCTCGTGGGAAGGGCACTGGAGTCCTGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR GCA 90 bp CGGACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTaGTTAGTACCCTGTGAGAAGACAAAGACCATCCGGGAGGGCGTG +
Preference number: 1 (lower is better)
Translates to: RTKARDHTPEVLVRS*LVPCEKTKTIREGV
Trigger: CACGCCCTCCCGGATGGTCTTTGTCTTCTCACAGGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR CCA 90 bp CTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCATGCAGTGGCCTaGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAG +
Preference number: 1 (lower is better)
Translates to: LIISCPGARPEHAVA*DKDRQHLYRTQYLK
Trigger: CTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACTGCATGCTCTGGCCGGGCCCCAGGACAGGAGATGATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR CCA 90 bp GGCAGCTGCAAGCCCCACCTAGAAGTACCCTGGTATGATAGGCTCTaGCTAGGAGCGCTGCAGTGTCACGAAGGCCCCCAGGGAGAGCTG +
Preference number: 1 (lower is better)
Translates to: GSCKPHLEVPWYDRL*LGALQCHEGPQGEL
Trigger: CAGCTCTCCCTGGGGGCCTTCGTGACACTGCAGCGCTCCTAGCCAGAGCCTATCATACCAGGGTACTTCTAGGTGGGGCTTGCAGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR GCA 90 bp GGGGGTGAGTTTCTTGTTAGTTGGAGTTGCTGGGTGCTGGGTGGGTaGCGTCTGGCAGGCCTGATACTGACGGAGCCTAGGGCAGCAAGC +
Preference number: 1 (lower is better)
Translates to: GGEFLVSWSCWVLGG*RLAGLILTEPRAAS
Trigger: GCTTGCTGCCCTAGGCTCCGTCAGTATCAGGCCTGCCAGACGGCACCCACCCAGCACCCAGCAACTCCAACTAACAAGAAACTCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR GCA 90 bp CCCTCCAGACTGCCCCTTGGGGGTGAGTTTCTTGTTAGTTGGAGTTaGTGGGTGCTGGGTGGGTGCCGTCTGGCAGGCCTGATACTGACG +
Preference number: 1 (lower is better)
Translates to: PSRLPLGGEFLVSWS*WVLGGCRLAGLILT
Trigger: CGTCAGTATCAGGCCTGCCAGACGGCACCCACCCAGCACCCAGCAACTCCAACTAACAAGAAACTCACCCCCAAGGGGCAGTCTGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR GCA 90 bp AGTGGGCCCTCCCAGTCCCATCTCTGGGCACAGATCCCACCAGTCTaGTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTGCACTGGGGT +
Preference number: 1 (lower is better)
Translates to: SGPSQSHLWAQIPPV*SPVCSVKAEWVHWG
Trigger: ACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGGGATCTGTGCCCAGAGATGGGACTGGGAGGGCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR GCA 90 bp GGGGCAGAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTaGTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACG +
Preference number: 1 (lower is better)
Translates to: GAEATRWVLPHITSL*SCLDSLMTCRGQGT
Trigger: CGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR GCA 90 bp CTCCACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTaGTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGGGTGTG +
Preference number: 1 (lower is better)
Translates to: LHIRFTQLDDRGIYY*WRQGVLVAGFRLGV
Trigger: CACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR CCA 90 bp CGCTCAGGAGGTCCTTCTGGGATCTGGGCAGGTGACTGCCCCAGGTaGCAGGACGTCCCCACCCATCTTAGACTGATCAGGGTCAGTCTA +
Preference number: 1 (lower is better)
Translates to: RSGGPSGIWAGDCPR*QDVPTHLRLIRVSL
Trigger: TAGACTGACCCTGATCAGTCTAAGATGGGTGGGGACGTCCTGCCACCTGGGGCAGTCACCTGCCCAGATCCCAGAAGGACCTCCTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 90 bp GGACTGAGACACTTGAGTCATCGCTCAGGAGGTCCTTCTGGGATCTaGGCAGGTGACTGCCCCAGGTGGCAGGACGTCCCCACCCATCTT +
Preference number: 1 (lower is better)
Translates to: GLRHLSHRSGGPSGI*AGDCPRWQDVPTHL
Trigger: AAGATGGGTGGGGACGTCCTGCCACCTGGGGCAGTCACCTGCCCAGATCCCAGAAGGACCTCCTGAGCGATGACTCAAGTGTCTCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 90 bp GATGAATACTATGGGCACCTCCATGTCTTCACCACCTTCTGGGAATaGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCAGTGGCGC +
Preference number: 1 (lower is better)
Translates to: DEYYGHLHVFTTFWE*TPCDRCGVRGEQWR
Trigger: GCGCCACTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATAGTATTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR CCA 90 bp GGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATaGCCAGATATGCAGGAGGGTGGGTTTCCTTCATCCCCCAGGTTG +
Preference number: 1 (lower is better)
Translates to: GKVPSHQLRSSQPPG*PDMQEGGFPSSPRL
Trigger: CAACCTGGGGGATGAAGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR CCA 90 bp GGGACTACTTTTACGCCTCAAGGCCGTGCCCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAAGGCCAGGGA +
Preference number: 1 (lower is better)
Translates to: GTTFTPQGRARCGVL*LKGCAKEAADQGQG
Trigger: TCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGCGTAAAAGTAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640859.1
3UTR GCA 90 bp TGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTaGAGGAATATGAGCCAGTGTCTTCACTTTGCTCGTGCCTCAGTT +
Preference number: 1 (lower is better)
Translates to: CTGVDVSALSTRPPG*RNMSQCLHFARASV
Trigger: AACTGAGGCACGAGCAAAGTGAAGACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 90 bp TCCAGACTGCCCCTTGGGGGTGAGTTTCTTGTTAGTTGGAGTTGCTaGGTGCTGGGTGGGTGCCGTCTGGCAGGCCTGATACTGACGGAG +
Preference number: 1 (lower is better)
Translates to: SRLPLGGEFLVSWSC*VLGGCRLAGLILTE
Trigger: CTCCGTCAGTATCAGGCCTGCCAGACGGCACCCACCCAGCACCCAGCAACTCCAACTAACAAGAAACTCACCCCCAAGGGGCAGTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 90 bp GCCCACAGCGTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTaGACTGAGACACTTGAGTCATCGCTCAGGAGGTCCTTCTGGGAT +
Preference number: 1 (lower is better)
Translates to: AHSVPTDGIPGWQLR*TETLESSLRRSFWD
Trigger: ATCCCAGAAGGACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCACGCTGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 90 bp CACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTaGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGGGTGTGACA +
Preference number: 1 (lower is better)
Translates to: HIRFTQLDDRGIYYC*RQGVLVAGFRLGVT
Trigger: TGTCACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR GCA 90 bp ACGTACACAACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTaGCCACAGCGTGCCCACAGATGGCATCCCTGGATGGCAGCTCAG +
Preference number: 1 (lower is better)
Translates to: TYTTDPPSAENQAPT*PQRAHRWHPWMAAQ
Trigger: CTGAGCTGCCATCCAGGGATGCCATCTGTGGGCACGCTGTGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGTTGTGTACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR GCA 90 bp GGAGCGGTACCACTCTTCGGCTTCATGCATGTTGCTGGACGCCATTaGCTCATACTGCGTGCGGATCTCTTTCAGGGCTGCGGTGAGGTC +
Preference number: 1 (lower is better)
Translates to: GAVPLFGFMHVAGRH*LILRADLFQGCGEV
Trigger: GACCTCACCGCAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTGGTACCGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR GCA 90 bp GAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTaGTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACA +
Preference number: 1 (lower is better)
Translates to: EATRWVLPHITSLCS*LDSLMTCRGQGTCT
Trigger: TGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR GCA 90 bp TTAACTATGTGTCCAAAGTGGGCAGCCGGCCCTGGGTGCCCCAGGTaGCCATTCAGTTCCACCAGCAGAGACTGGGCCATGGACTCATCA +
Preference number: 1 (lower is better)
Translates to: LTMCPKWAAGPGCPR*PFSSTSRDWAMDSS
Trigger: TGATGAGTCCATGGCCCAGTCTCTGCTGGTGGAACTGAATGGGCACCTGGGGCACCCAGGGCCGGCTGCCCACTTTGGACACATAGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR CCA 90 bp TGGCGAGTGGTAAGCTGCTGGAGTAAGATGAGCTCCCACTGTGGTTaGAGTGGCGTGGCGGATACGCCAAATCCCCTCTTCCCATTCCCC +
Preference number: 1 (lower is better)
Translates to: WRVVSCWSKMSSHCG*SGVADTPNPLFPFP
Trigger: GGGGAATGGGAAGAGGGGATTTGGCGTATCCGCCACGCCACTCCAACCACAGTGGGAGCTCATCTTACTCCAGCAGCTTACCACTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR CCA 90 bp TTTGCAGATGAATACTATGGGCACCTCCATGTCTTCACCACCTTCTaGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCAG +
Preference number: 1 (lower is better)
Translates to: FADEYYGHLHVFTTF*EWTPCDRCGVRGEQ
Trigger: CTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATAGTATTCATCTGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR CCA 90 bp CTGCCTCCTTCAGGTATGCACCTGGCCCTCACCACTGTGCTCCTGTaGGCATGGGGGCTCCAGGCCTTTGAAATTGTGGAGAAGGAAAAC +
Preference number: 1 (lower is better)
Translates to: LPPSGMHLALTTVLL*AWGLQAFEIVEKEN
Trigger: GTTTTCCTTCTCCACAATTTCAAAGGCCTGGAGCCCCCATGCCCACAGGAGCACAGTGGTGAGGGCCAGGTGCATACCTGAAGGAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
3UTR TCA 90 bp CCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTTCC +
Preference number: 1 (lower is better)
Translates to: PLHPASPRSSPRCSS*GGLLTQTWCPGWFS
Trigger: GGAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR TCA 90 bp CTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTaGGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTA +
Preference number: 1 (lower is better)
Translates to: LQHPHVQLVGFQGSV*GLRPVLLRHPQGGL
Trigger: TAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
3UTR GCA 90 bp ATCCAGAGGCCAAGTGCAACTGGTCACCCACAACCCCTACTTGTATaGCTAGCGCCATCCCAATTGCCTCCTCCTCCATCTCTACCAGCG +
Preference number: 1 (lower is better)
Translates to: IQRPSATGHPQPLLV*LAPSQLPPPPSLPA
Trigger: CGCTGGTAGAGATGGAGGAGGAGGCAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTTGGCCTCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR GCA 90 bp TGCTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTaGACAGTGCAACAGTTAGGAGTTCACACAGACCCCAGGTCCACC +
Preference number: 1 (lower is better)
Translates to: CSCLDSLMTCRGQGT*TVQQLGVHTDPRST
Trigger: GGTGGACCTGGGGTCTGTGTGAACTCCTAACTGTTGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR CCA 90 bp CCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTTCCCTGTC +
Preference number: 1 (lower is better)
Translates to: PSRISTVFTTMFLLR*PSDTDLVSRLVFPV
Trigger: GACAGGGAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR TCA 90 bp CATCTCCACGGTCTTCACCACGATGTTCCTCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAGGCTGGTTTTCCCTGTCAAGCTGGG +
Preference number: 1 (lower is better)
Translates to: HLHGLHHDVPLEVAF*HRLGVQAGFPCQAG
Trigger: CCCAGCTTGACAGGGAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR TCA 90 bp TGGTCTTGTCAAAGGCTACATCTTGGCCCCAGTCCCGCCCTCTCATaGACAGATCAGAGTCCACTCTGGGGAAGGGCGCAGCATTTGTCT +
Preference number: 1 (lower is better)
Translates to: WSCQRLHLGPSPALS*TDQSPLWGRAQHLS
Trigger: AGACAAATGCTGCGCCCTTCCCCAGAGTGGACTCTGATCTGTTCATGAGAGGGCGGGACTGGGGCCAAGATGTAGCCTTTGACAAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR CCA 90 bp GTCTCTGGGTGGGTACCCTGGGTTGGGACAGGTGGTAGGAACATGTaGACAAATCTGTTACAGCCTGCTCCCCATTTTCATGGGCAGGTC +
Preference number: 1 (lower is better)
Translates to: VSGWVPWVGTGGRNM*TNLLQPAPHFHGQV
Trigger: GACCTGCCCATGAAAATGGGGAGCAGGCTGTAACAGATTTGTCCACATGTTCCTACCACCTGTCCCAACCCAGGGTACCCACCCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
3UTR CCA 90 bp ACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTaGACATCCAGAACAGTGAGGGAATGGTGGCCACTTTCCAGGACA +
Preference number: 1 (lower is better)
Translates to: TSAAPARGTTFTPTM*TSRTVREWWPLSRT
Trigger: TGTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR TCA 90 bp TTGATAGTAACCACAGCTGCCTTGCGTGGTGGACAGAGGGGGTGGTaGGATAACACTGGGAAAGCATTTAGCGTCATGCCTGGCGAGTGG +
Preference number: 1 (lower is better)
Translates to: LIVTTAALRGGQRGW*DNTGKAFSVMPGEW
Trigger: CCACTCGCCAGGCATGACGCTAAATGCTTTCCCAGTGTTATCTCACCACCCCCTCTGTCCACCACGCAAGGCAGCTGTGGTTACTATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR GCA 90 bp AGCGCCAGTGTTCTGGCCGACATGAGCTTTGAGCTTCCCTGTCACTaGAAACCCGAAGAGGTGCCAGCTGTAGTCTGGTTCTACCAAAAG +
Preference number: 1 (lower is better)
Translates to: SASVLADMSFELPCH*KPEEVPAVVWFYQK
Trigger: CTTTTGGTAGAACCAGACTACAGCTGGCACCTCTTCGGGTTTGCAGTGACAGGGAAGCTCAAAGCTCATGTCGGCCAGAACACTGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639243.1
ENST00000640859.1
3UTR CCA 90 bp GAGCTTCCCTGTCACTGCAAACCCGAAGAGGTGCCAGCTGTAGTCTaGTTCTACCAAAAGCACCTAGGTAGCAGCCACACCAAAGTGCTG +
Preference number: 1 (lower is better)
Translates to: ELPCHCKPEEVPAVV*FYQKHLGSSHTKVL
Trigger: CAGCACTTTGGTGTGGCTGCTACCTAGGTGCTTTTGGTAGAACCAGACTACAGCTGGCACCTCTTCGGGTTTGCAGTGACAGGGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
3UTR GCA 90 bp CCACTGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTaGCAGTTTAATGTACAGTTACTCTGTACCACGTCCTGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: PLRTQGLTTFTTNKL*QFNVQLLCTTSWAG
Trigger: CCCAGCCCAGGACGTGGTACAGAGTAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR GCA 90 bp CCTCACATCACATCCTTGTGCTCCTGCTTGGACTCCTTAATGACCTaGAGGGGACAGGGAACGTGCACAGTGCAACAGTTAGGAGTTCAC +
Preference number: 1 (lower is better)
Translates to: PHITSLCSCLDSLMT*RGQGTCTVQQLGVH
Trigger: GTGAACTCCTAACTGTTGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR GCA 90 bp AATGCAGCCTACCTGGCCGACATGAGCTTTGAGCTTCCCTGTCACTaGAAACCCGAAGAGGTGCCAGCTGTAGTCTGGTTCTACCAAAAG +
Preference number: 1 (lower is better)
Translates to: NAAYLADMSFELPCH*KPEEVPAVVWFYQK
Trigger: CTTTTGGTAGAACCAGACTACAGCTGGCACCTCTTCGGGTTTGCAGTGACAGGGAAGCTCAAAGCTCATGTCGGCCAGGTAGGCTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
3UTR CCA 90 bp ACTACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATaGTGGCCACTTTCCAGGACAAGGGCCAGGAGCCCTTTGCAGATG +
Preference number: 1 (lower is better)
Translates to: TTFTPTMWTSRTVRE*WPLSRTRARSPLQM
Trigger: CATCTGCAAAGGGCTCCTGGCCCTTGTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR TCA 90 bp AGAGCTGCGGTCCTGAGGGAAGAATCCTCTGAACTGAGTCAGCACTaGGCTGAGCGATGGAGCCTCAGGGATGAAAGAATAAAGCAGAGA +
Preference number: 1 (lower is better)
Translates to: RAAVLREESSELSQH*AERWSLRDERIKQR
Trigger: TCTCTGCTTTATTCTTTCATCCCTGAGGCTCCATCGCTCAGCTCAGTGCTGACTCAGTTCAGAGGATTCTTCCCTCAGGACCGCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435360.7
ENST00000638281.1
3UTR TCA 90 bp TTTGTCTTTATTTTTCCTCAGCGACTAAAGGCAGCAGCAGTGCCCTaGAGATTAGCAGCAGCAGCAGCAGCAGGTGGCAGGAAGGAGTGG +
Preference number: 1 (lower is better)
Translates to: FVFIFPQRLKAAAVP*RLAAAAAAGGRKEW
Trigger: CCACTCCTTCCTGCCACCTGCTGCTGCTGCTGCTGCTAATCTTCAGGGCACTGCTGCTGCCTTTAGTCGCTGAGGAAAAATAAAGACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR CCA 90 bp AGAAAAGAGTGGAGGGAGCTGGTGTATGTCCTCTTTGGCTGCGGGTaGAATTTGGTGAGGGCATGGGCCCCAGAGATGATCAGTAATAAG +
Preference number: 1 (lower is better)
Translates to: RKEWRELVYVLFGCG*NLVRAWAPEMISNK
Trigger: CTTATTACTGATCATCTCTGGGGCCCATGCCCTCACCAAATTCCACCCGCAGCCAAAGAGGACATACACCAGCTCCCTCCACTCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR CCA 90 bp ACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTaGCCACTTTCCAGGACAAGGGCCAGGAGCCCTTTGCAGATGAAT +
Preference number: 1 (lower is better)
Translates to: TFTPTMWTSRTVREW*PLSRTRARSPLQMN
Trigger: ATTCATCTGCAAAGGGCTCCTGGCCCTTGTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR GCA 90 bp ACAAAAACAGAAAACACTCAGAAGGGCAGTGCTTGCTCAGGGATCTaGAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCTGTCGA +
Preference number: 1 (lower is better)
Translates to: TKTENTQKGSACSGI*RQGRCQALTQFCCR
Trigger: TCGACAGCAGAACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGCCCTTCTGAGTGTTTTCTGTTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR GCA 90 bp ACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTaGAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCA +
Preference number: 1 (lower is better)
Translates to: TSFEVLNFPLETQFL*RLGLGKSQAISSGP
Trigger: TGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
3UTR CCA 90 bp AGAAGGGCATCTTGTACATCCACTGGGAATAAATTGCCTTGCACTTaGCGGCTTCCTCTGCAGATTGTTGCTGCTTTTCCTGGCTGCATA +
Preference number: 1 (lower is better)
Translates to: RRASCTSTGNKLPCT*RLPLQIVAAFPGCI
Trigger: TATGCAGCCAGGAAAAGCAGCAACAATCTGCAGAGGAAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGGATGTACAAGATGCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
3UTR GCA 90 bp AATGTTAGAAGGGCATCTTGTACATCCACTGGGAATAAATTGCCTTaGACTTGGCGGCTTCCTCTGCAGATTGTTGCTGCTTTTCCTGGC +
Preference number: 1 (lower is better)
Translates to: NVRRASCTSTGNKLP*TWRLPLQIVAAFPG
Trigger: GCCAGGAAAAGCAGCAACAATCTGCAGAGGAAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGGATGTACAAGATGCCCTTCTAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
3UTR CCA 90 bp ACCGCGAGCCGGCGGCGTTCCATTTACAATCTGGTGAGCCTGTATTaGTATAACTCGTATTGTGAGGCTTTTGAGATATCTTGTGACCTT +
Preference number: 1 (lower is better)
Translates to: TASRRRSIYNLVSLY*YNSYCEAFEISCDL
Trigger: AAGGTCACAAGATATCTCAAAAGCCTCACAATACGAGTTATACCAATACAGGCTCACCAGATTGTAAATGGAACGCCGCCGGCTCGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp TTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCGGGAGCAGCTCCGCGTTaGGGGCAGCAGCGTCTGTCA +
Preference number: 2 (lower is better)
Translates to: FLQPRQRLLITGRLPHVPGAAPR*GQQRLS
Trigger: TGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCC...CGGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR-3UTR CCA 90 bp GGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGTTGCTGGGTGCTGGGTaGGTGCCGTCTGGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: GCTGVDVSALSTRPPGCRLLGAG*VPSGRP
Trigger: AGGCCTGCCAGACGGCACCCACCCAGCACCCAGCAA...CCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp CCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCGCTCCTCCTGCTCGCCGTTGGCTTCGTGCTTaGCCTGGCGGAGCAGCTCCG +
Preference number: 2 (lower is better)
Translates to: PAPPDNWPPPARAAPPARRWLRA*PGGAAP
Trigger: CGGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAACG...GCGAGCAGGAGGAGCGGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR-3UTR TCA 90 bp CCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCGCTCCTCCTGCTCGCCTTTCAGGGCTGCGGTaGGGTCTGGCTTGGCCACGT +
Preference number: 2 (lower is better)
Translates to: PAPPDNWPPPARAAPPARLSGLR*GLAWPR
Trigger: ACGTGGCCAAGCCAGACCTCACCGCAGCCCTGAAAG...GCGAGCAGGAGGAGCGGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR-3UTR CCA 90 bp GGCTTCGTGCTTGGCCTGGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCGGGCCAGCTGCTCCTaGAGTTCCCGAACCTCCTCC +
Preference number: 2 (lower is better)
Translates to: GFVLGLAEQLRVAGSSVCRASCS*SSRTSS
Trigger: GGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCG...ACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR-3UTR GCA 90 bp GAGGCTCTGCCCCTCTTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCAGCTCCACATGGACCTaGTGTCGGGCCAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: EALPLFLQPRQRLLITGRSSTWT*CRASCS
Trigger: GGAGCAGCTGGCCCGACAGCAGGTCCATGTGGAGCT...GCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAAGAGGGGCAGAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR-3UTR GCA 90 bp GCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGACAGAGGCTGCTGCTTaGTCAGAGGCCCCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: AGQSAVSERQAANREPAATEAAA*SEAPEQ
Trigger: CTGCTCTGGGGCCTCTGAGCAAGCAGCAGCCTCTGT...CGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR CCA 90 bp GGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGGCAGAGGCCACCAGGTaGGTCCTGCCTCACATCACA +
Preference number: 2 (lower is better)
Translates to: GCTGVDVSALSTRPPGCRAEATR*VLPHIT
Trigger: TGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTGC...CCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR TCA 90 bp CTGCCCGGGCTGCCTGGGACACCCCTAGGCTGGGTCTTGGTGCGGGGCCATCATCGTCTGCAAGGGGCTTaGGTGTTATCTGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LPGLPGTPLGWVLVRGHHRLQGA*VLSGRG
Trigger: GCCCCTCCCAGATAACACTCAAGCCCCTTGCAGACG...ATGATGGCCCCGCACCAAGACCCAGCCTAGGGGTGTCCCAGGCAGCCCGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR-3UTR TCA 90 bp GTTAGTTGGAGTTGCTGGGTGCTGGGTGGGTGCCGTCTGGCAGGCCTGATACTGTGCTCGGGCCCCTCATaGGACGGGGCAGAGGCCACC +
Preference number: 2 (lower is better)
Translates to: VSWSCWVLGGCRLAGLILCSGPS*DGAEAT
Trigger: GGTGGCCTCTGCCCCGTCTCATGAGGGGCCCGAGCA...CAGTATCAGGCCTGCCAGACGGCACCCACCCAGCACCCAGCAACTCCAACTAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR TCA 90 bp GCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGCAGGGCCTGGAGCACTaGGGCAGAGATCTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: AISSGPASLPDGQICRRVQGLEH*GRDLPA
Trigger: GGCAGGGAGATCTCTGCCTCAGTGCTCCAGGCCCTG...CACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR-3UTR GCA 90 bp GGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGCCACCAGGTGGGTCCTaGCTCACATCACATCCTTGT +
Preference number: 2 (lower is better)
Translates to: GCTGVDVSALSTRPPGCRPPGGS*LTSHPC
Trigger: ACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGG...CCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CCA 90 bp GGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGGAGGCCAAGTGCAACTaGTCACCCACAACCCCTACT +
Preference number: 2 (lower is better)
Translates to: GCTGVDVSALSTRPPGCREAKCN*SPTTPT
Trigger: AGTAGGGGTTGTGGGTGACCAGTTGCACTTGGCCTC...CCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp AGCAGAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACGGAACTCAGGGGGATTaGGAGGATGGGGTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: SREPGVQAQRDPRGPPSDGTQGD*EDGVGE
Trigger: CTCACCCACCCCATCCTCCCAATCCCCCTGAGTTCC...GTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR TCA 90 bp GAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAGAGGCCCTGCTGTACTaGCCTCGAATCTGCAGGTTG +
Preference number: 2 (lower is better)
Translates to: ESLASRHSETQGALPVTGEALLY*PRICRL
Trigger: CAACCTGCAGATTCGAGGTCAGTACAGCAGGGCCTC...TCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR-3UTR GCA 90 bp ACCTGCCCACAGCGTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACATCTGGGCAGGTGACTaGCCCAGGTGGCAGGACGTC +
Preference number: 2 (lower is better)
Translates to: TCPQRAHRWHPWMAAQVDIWAGD*PRWQDV
Trigger: GACGTCCTGCCACCTGGGGCAGTCACCTGCCCAGAT...GTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCACGCTGTGGGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp GAGGCTCTGCCCCTCTTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCGTTGCTGGACGCCATTaGCTCATACTGCGTGCGGAT +
Preference number: 2 (lower is better)
Translates to: EALPLFLQPRQRLLITGRVAGRH*LILRAD
Trigger: ATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAAC...GCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAAGAGGGGCAGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR-3UTR GCA 90 bp AAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCAGGACAGGGGCAGCTaGAAGCCCCACCTAGAAGTA +
Preference number: 2 (lower is better)
Translates to: KLGKAPCLRGRQLTASRRQDRGS*KPHLEV
Trigger: TACTTCTAGGTGGGGCTTGCAGCTGCCCCTGTCCTG...CCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR CCA 90 bp TGCCAGCAGAGGCGGAGCAACTATCCTGCTTCTGCTCGGGCCCCTCATGAGACGTTGCTGGGTGCTGGGTaGGTGCCGTCTGGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: CQQRRSNYPASARAPHETLLGAG*VPSGRP
Trigger: AGGCCTGCCAGACGGCACCCACCCAGCACCCAGCAA...CGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGCCTCTGCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp GACTCGTTCGTGCCGCGCAGAGACTCCAGGTCGCAGGTCAAGGACTGCAACTGGGCTTCGTGCTTGGCCTaGCGGAGCAGCTCCGCGTTG +
Preference number: 2 (lower is better)
Translates to: DSFVPRRDSRSQVKDCNWASCLA*RSSSAL
Trigger: CAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGC...CCAGTTGCAGTCCTTGACCTGCGACCTGGAGTCTCTGCGCGGCACGAACGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR CAA 90 bp AGACCTCTCCCCACGCTACCTCAAGGCCGTGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: RPLPTLPQGRARCGV*WLKGCAKEAADQGQ
Trigger: CTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGTAGCGTGGGGAGAGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR CAA 90 bp TCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGCGCCAGTGTTCTCAAGGCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: SLPEHLGPPFSFRFP*THSWVSASVLKAVP
Trigger: GGGCACGGCCTTGAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
3UTR-3UTR TCA 90 bp GAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGTGACAGGAAGAGGTaGGACAGAGGCTGCTGCTTG +
Preference number: 2 (lower is better)
Translates to: ESLASRHSETQGALPVTGSDRKR*DRGCCL
Trigger: CAAGCAGCAGCCTCTGTCTCACCTCTTCCTGTCACT...TCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp GGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGAATGGGACAAAGTCATaGCCTGCCCCCATGGATACA +
Preference number: 2 (lower is better)
Translates to: GCTGVDVSALSTRPPGCRNGTKS*PAPMDT
Trigger: TGTATCCATGGGGGCAGGGCATGACTTTGTCCCATT...CCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp GACTCGTTCGTGCCGCGCAGAGACTCCAGGTCGCAGGTCAAGGACTGCAACTGGTGCTGTCGGGCCAGCTaGTCCTGGAGTTCCCGAACC +
Preference number: 2 (lower is better)
Translates to: DSFVPRRDSRSQVKDCNWCCRAS*SWSSRT
Trigger: GGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCA...CCAGTTGCAGTCCTTGACCTGCGACCTGGAGTCTCTGCGCGGCACGAACGAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR-3UTR GCA 90 bp TCGTGCTTGGCCTGGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCAGGCGGCTTCATGCATGTTaGTGGACGCCATTGCCTCAT +
Preference number: 2 (lower is better)
Translates to: SCLAWRSSSALRAAASVRRLHAC*WTPLPH
Trigger: ATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCG...CCTGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR-3UTR CCA 90 bp CCAGGGACTCGTTCGTGCCGCGCAGAGACTCCAGGTCGCAGGTCAAGGACTGCAACGTCAAGCTCCACATaGACCTGCTGTCGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: PGTRSCRAETPGRRSRTATSSST*TCCRAS
Trigger: GCTGGCCCGACAGCAGGTCCATGTGGAGCTTGACGT...TGCAGTCCTTGACCTGCGACCTGGAGTCTCTGCGCGGCACGAACGAGTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR-3UTR CCA 90 bp TGTCGGGCCAGCTGCTCCTGGAGTTCCCGAACCTCCTCCTCGTGGATCTTCCTCGGCTGCGGTGAGGTCTaGCTTGGCCACGTCAAGCTC +
Preference number: 2 (lower is better)
Translates to: CRASCSWSSRTSSSWIFLGCGEV*LGHVKL
Trigger: GAGCTTGACGTGGCCAAGCCAGACCTCACCGCAGCC...GAGGAAGATCCACGAGGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR CAA 90 bp TTGGGTGAGCGCCAGTGTTCTCAAGGCCGTGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: LGERQCSQGRARCGV*WLKGCAKEAADQGQ
Trigger: CTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGAACACTGGCGCTCACCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
3UTR CAA 90 bp TCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGCGCCAGTGTTCTGGCCGACATGAGC +
Preference number: 2 (lower is better)
Translates to: SLPEHLGPPFSFRFP*THSWVSASVLADMS
Trigger: GCTCATGTCGGCCAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639243.1
ENST00000640859.1
3UTR-3UTR TCA 90 bp ACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGTCATCGTGCTCGGGCCCCTCATaGGACGGGGCAGAGGCCACC +
Preference number: 2 (lower is better)
Translates to: TDGIPGWQLRWTETLESSCSGPS*DGAEAT
Trigger: GGTGGCCTCTGCCCCGTCTCATGAGGGGCCCGAGCA...CGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp TCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGAATATGAGCCAGTGTCTTCACCACCTGCCCACAGCGTaGCCACAGATGGCATCCCTG +
Preference number: 2 (lower is better)
Translates to: SALSTRPPGCRNMSQCLHHLPTA*PQMASL
Trigger: CAGGGATGCCATCTGTGGGCACGCTGTGGGCAGGTG...GTGAAGACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp AGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTGGAGCGGGATCTCTTTCAGGGCTaGGGTGAGGTCTGGCTTGGC +
Preference number: 2 (lower is better)
Translates to: SSSALRAAASVRSANLERDLFQG*GEVWLG
Trigger: GCCAAGCCAGACCTCACCGCAGCCCTGAAAGAGATC...CCGCTCCAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCGGAGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR-3UTR GCA 90 bp CTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTTCCTGGGCTGGGCACTaGAGTTCCTGGGAAAATGAC +
Preference number: 2 (lower is better)
Translates to: LASRHSETQGALPVTGRGSWAGH*SSWEND
Trigger: GTCATTTTCCCAGGAACTGCAGTGCCCAGCCCAGGA...ACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp GCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGAGTCCTGGGCTGGGCACTaGAGTTCCTGGGAAAATGAC +
Preference number: 2 (lower is better)
Translates to: ASRHSETQGALPVTGRGESWAGH*SSWEND
Trigger: GTCATTTTCCCAGGAACTGCAGTGCCCAGCCCAGGA...CTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp GCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCGGGGCAGGACTCCAGTaGCCTTCCCACGAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: ACSGICRQGRCQALTQFCGAGLQ*PSHEAL
Trigger: CAGGGCCTCGTGGGAAGGGCACTGGAGTCCTGCCCC...GCAGAACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR-3UTR CCA 90 bp AGGACACCAAGTCTTGGGGAGAGGGAAGGACCCTTCTTCGGCCTTAGAGGGGAGGGAGTTGCTGGGTGCTaGGTGGGTGCCGTCTGGCAG +
Preference number: 2 (lower is better)
Translates to: RTPSLGEREGPFFGLRGEGVAGC*VGAVWQ
Trigger: CTGCCAGACGGCACCCACCCAGCACCCAGCAACTCC...CTCCCCTCTAAGGCCGAAGAAGGGTCCTTCCCTCTCCCCAAGACTTGGTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp GGGCAGAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTAGCTCCCACTGTGGTTaGAGTGGCGTGGCGGATACG +
Preference number: 2 (lower is better)
Translates to: GQRPPGGSCLTSHPCAPASSHCG*SGVADT
Trigger: CGTATCCGCCACGCCACTCCAACCACAGTGGGAGCT...AGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CCA 90 bp CAGAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGGGCCTTGAGAATCCCTaGGGCCAGCCAGAGCCTGAC +
Preference number: 2 (lower is better)
Translates to: QRPPGGSCLTSHPCAPAWGLENP*GQPEPD
Trigger: GTCAGGCTCTGGCTGGCCCCAGGGATTCTCAAGGCC...CCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CCA 90 bp ACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCTCCGCTTCACCCAGCTaGATGACCGGGGCATCTACT +
Preference number: 2 (lower is better)
Translates to: TEAAQVRVGSDMLTRFSISASPS*MTGAST
Trigger: AGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGA...GATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
3UTR-3UTR CCA 90 bp CTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTAGGGGAAGCGGGACACCCCTAGGCTaGGTCTTGGTGCGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: LGTAVPGKMTQSRPFRGSGTPLG*VLVRGH
Trigger: ATGGCCCCGCACCAAGACCCAGCCTAGGGGTGTCCC...GCTTCCCCTAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR-3UTR CCA 90 bp GAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGATGGTATGATAGGCTCTaGCTAGGAGCGCTGCAGTGT +
Preference number: 2 (lower is better)
Translates to: ESLASRHSETQGALPVTGWYDRL*LGALQC
Trigger: ACACTGCAGCGCTCCTAGCCAGAGCCTATCATACCA...TCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR CAA 90 bp AGGGGGACTACTTTTACGCCTCAAGGCCGTGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: RGTTFTPQGRARCGV*WLKGCAKEAADQGQ
Trigger: CTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGCGTAAAAGTAGTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640859.1
3UTR-3UTR TCA 90 bp CCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGCCACTTTCCAGGACATGCTCGGGCCCCTCATaGGACGGGGCAGAGGCCACC +
Preference number: 2 (lower is better)
Translates to: PTMWTSRTVREWWPLSRTCSGPS*DGAEAT
Trigger: GGTGGCCTCTGCCCCGTCTCATGAGGGGCCCGAGCA...TGTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR-3UTR TCA 90 bp ACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCTTCACCCAGCTGGATaGCCGGGGCATCTACTATTG +
Preference number: 2 (lower is better)
Translates to: TEAAQVRVGSDMLTRFSILHPAG*PGHLLL
Trigger: CAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAG...GATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
3UTR-3UTR GCA 90 bp CCACCACCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTCTTACGTTGGAGTTGCTGGGTaGTGGGTGGGTGCCGTCTGG +
Preference number: 2 (lower is better)
Translates to: PPPRGCVTLGSPRLPRSYVGVAG*WVGAVW
Trigger: CCAGACGGCACCCACCCAGCACCCAGCAACTCCAAC...GTAAGACCTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGGTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR GCA 90 bp TCACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGAGGGCGATGTAGTAGGTaGCCCCCGCCCTCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: SLWGGEGQTCGSGLLGLRGRCSR*PPPSSP
Trigger: AGGGGAGGAGGGCGGGGGGCACCTACTACATCGCCC...TCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp CCACGTACACAACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTGCCCACTTGCTGGGTGCTGGGTaGGTGCCGTCTGGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: PRTQQIPQVLRIKLPPAHLLGAG*VPSGRP
Trigger: AGGCCTGCCAGACGGCACCCACCCAGCACCCAGCAA...GTGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGTTGTGTACGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp AGGGGAGAGGAGAACCCTGAAGTGGGCCCTCCCAGTCCCATCTCTGGGCACAGAGTTAGTTGGAGTTGCTaGGTGCTGGGTGGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: RGEENPEVGPPSPISGHRVSWSC*VLGGCR
Trigger: ACGGCACCCACCCAGCACCCAGCAACTCCAACTAAC...TCTGTGCCCAGAGATGGGACTGGGAGGGCCCACTTCAGGGTTCTCCTCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp TGCCAGCAGAGGCGGAGCAACTATCCTGCTTCTGCTCGGGCCCCTCATGAGACGTCTAACGCAAGCTGCTaGCCATGCCCCTCCAGACTG +
Preference number: 2 (lower is better)
Translates to: CQQRRSNYPASARAPHETSNASC*PCPSRL
Trigger: CAGTCTGGAGGGGCATGGCCAGCAGCTTGCGTTAGA...CGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGCCTCTGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp CCACCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTGCACTGGGGTGGTCCTTCTGGGATCTaGGCAGGTGACTGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: PPVCSPVCSVKAEWVHWGGPSGI*AGDCPR
Trigger: CCTGGGGCAGTCACCTGCCCAGATCCCAGAAGGACC...ACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp CGTCCTGGGCTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTGGAACTCAGGGGGATTaGGAGGATGGGGTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: RPGLGTAVPGKMTQSRPFGTQGD*EDGVGE
Trigger: CTCACCCACCCCATCCTCCCAATCCCCCTGAGTTCC...AAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAGCCCAGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR CCA 90 bp ACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCGGGTGTGACATCTCATaGGCACTACCCAGCCTCGTT +
Preference number: 2 (lower is better)
Translates to: TEAAQVRVGSDMLTRFSIGCDIS*ALPSLV
Trigger: AACGAGGCTGGGTAGTGCCCATGAGATGTCACACCC...GATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
3UTR-3UTR TCA 90 bp GGTGGCTTCATCTGCTTCCTGTCTATAGGCAGCCAGGTTGTTCTCGGCTTCCAGCTGTTGGCGGTGAGTTaGTCGAGCCGCAGCCGCAGC +
Preference number: 2 (lower is better)
Translates to: GGFICFLSIGSQVVLGFQLLAVS*SSRSRS
Trigger: GCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAG...CTGGAAGCCGAGAACAACCTGGCTGCCTATAGACAGGAAGCAGATGAAGCCACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR-3UTR TCA 90 bp CTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGCCATCATGACAACTTaGACGCCCTTTTCCTTGCCA +
Preference number: 2 (lower is better)
Translates to: LASRHSETQGALPVTGRGAIMTT*TPFSLP
Trigger: TGGCAAGGAAAAGGGCGTTCAAGTTGTCATGATGGC...ACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR-3UTR GCA 90 bp GTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGCATGCCCCTCCAGACTaGCCCTTGGGGGTGAGTTTC +
Preference number: 2 (lower is better)
Translates to: VPTDGIPGWQLRWTETLEHAPPD*PLGVSF
Trigger: GAAACTCACCCCCAAGGGGCAGTCTGGAGGGGCATG...CTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp GCAGCCAGGTTGTTCTCGGCTTCCAGCCTCAGGTTGGTTTCATCCTGGAGCTTCTGCTGTCGGGCCAGCTaGTCCTGGAGTTCCCGAACC +
Preference number: 2 (lower is better)
Translates to: AARLFSASSLRLVSSWSFCCRAS*SWSSRT
Trigger: GGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCA...GAAGCTCCAGGATGAAACCAACCTGAGGCTGGAAGCCGAGAACAACCTGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR-3UTR GCA 90 bp CCCAGGTCCACCACCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGCCACCAGGTGGGTCCTaGCTCACATCACATCCTTGT +
Preference number: 2 (lower is better)
Translates to: PRSTTTRLCNLGKSPTSQPPGGS*LTSHPC
Trigger: ACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGG...CTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGGTGGTGGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR GCA 90 bp CTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATCCAGAATCGGCCTCTGCTACCTaGAGAGCCCAGACCTCTCCC +
Preference number: 2 (lower is better)
Translates to: LRHPQGGLLLRLRCGHPESASAT*RAQTSP
Trigger: GGGAGAGGTCTGGGCTCTGCAGGTAGCAGAGGCCGA...TTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR-3UTR GCA 90 bp GAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAGAACGCCCTTTTCCTTaGCAGGAAAGTCTAACTCCA +
Preference number: 2 (lower is better)
Translates to: ESLASRHSETQGALPVTGERPFP*QESLTP
Trigger: TGGAGTTAGACTTTCCTGGCAAGGAAAAGGGCGTTC...TCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR-3UTR CCA 90 bp ACCTGCCCACAGCGTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACGACAAAACAAGCCTCTaGCCAGGGCTACCTTGTCTG +
Preference number: 2 (lower is better)
Translates to: TCPQRAHRWHPWMAAQVDDKTSL*PGLPCL
Trigger: CAGACAAGGTAGCCCTGGCCAGAGGCTTGTTTTGTC...GTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCACGCTGTGGGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp AGGACACCAAGTCTTGGGGAGAGGGAAGGACCCTTCTTCGGCCTTAGAGGGGAGGAGGCTGGGGCGGCCTaGTATGACACAGCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: RTPSLGEREGPFFGLRGEEAGAA*YDTARK
Trigger: CTTCCTTGCTGTGTCATACCAGGCCGCCCCAGCCTC...CTCCCCTCTAAGGCCGAAGAAGGGTCCTTCCCTCTCCCCAAGACTTGGTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp CTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTAGGGGAAGCGGAACTCAGGGGGATTaGGAGGATGGGGTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: LGTAVPGKMTQSRPFRGSGTQGD*EDGVGE
Trigger: CTCACCCACCCCATCCTCCCAATCCCCCTGAGTTCC...GCTTCCCCTAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR CCA 90 bp AGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGAGACAGAGATAAAGCAGAGAGCCTaGCGTCCAGGCACAGCGAGA +
Preference number: 2 (lower is better)
Translates to: RHSETQGALPVTGRGETEIKQRA*RPGTAR
Trigger: TCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTAT...CTCTGTCTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR CCA 90 bp GGCTCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAAGTTCTGCTGTCGAATaGGGTGCAGGGAGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: GSLPVKLGKAPCLRGRQLSSAVE*GAGRGR
Trigger: TCTTCCCCTCCCTGCACCCCATTCGACAGCAGAACT...TAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR CCA 90 bp GAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGCCAACGTGCTATCTaGAGTTCCAAACGTCTGCAA +
Preference number: 2 (lower is better)
Translates to: ESLASRHSETQGALPVTGSQRAI*SSKRLQ
Trigger: TTGCAGACGTTTGGAACTCCAGATAGCACGTTGGCT...TCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR CAA 90 bp CCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTaGAGTCATCGCTCAGGAGGTCCTTCTGGGATCTGGGCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: PQMASLDGSSGGLRH*SHRSGGPSGIWAGD
Trigger: GTCACCTGCCCAGATCCCAGAAGGACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CAA 90 bp ACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATaGCCTCCTCCTCCATCTCTACCAGCGTCCCCTCCAGTCTGCACG +
Preference number: 2 (lower is better)
Translates to: TGHPQPLLVCLAPSQ*PPPPSLPASPPVCT
Trigger: CGTGCAGACTGGAGGGGACGCTGGTAGAGATGGAGGAGGAGGCAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CAA 90 bp GCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTaGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTG +
Preference number: 2 (lower is better)
Translates to: ATRWVLPHITSLCSC*DSLMTCRGQGTCTV
Trigger: CACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR CAA 90 bp TCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGCGCCAGTGTTCTAGAAAGGGGAGTA +
Preference number: 2 (lower is better)
Translates to: SLPEHLGPPFSFRFP*THSWVSASVLERGV
Trigger: TACTCCCCTTTCTAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
3UTR CAA 90 bp GGATGGCCAGATATGCAGGAGGGTGGGTTTCCTTCATCCCCCAGGTaGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: GWPDMQEGGFPSSPR*MKDFSTRLAGQGLE
Trigger: CTCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGATGAAGGAAACCCACCCTCCTGCATATCTGGCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR-3UTR TCA 90 bp AATCTTCCTCTCCAGATCCAGACGGGCCAGGGTGGCTTCATCTGCTTCCTGTCTCTTTCAGGGCTGCGGTaGGGTCTGGCTTGGCCACGT +
Preference number: 2 (lower is better)
Translates to: NLPLQIQTGQGGFICFLSLSGLR*GLAWPR
Trigger: ACGTGGCCAAGCCAGACCTCACCGCAGCCCTGAAAG...AGACAGGAAGCAGATGAAGCCACCCTGGCCCGTCTGGATCTGGAGAGGAAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR-3UTR TCA 90 bp GCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCGAGTCAGCACTGAGCTaGGCGATGGAGCCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: ACSGICRQGRCQALTQFCESALS*AMEPQG
Trigger: TCCCTGAGGCTCCATCGCTCAGCTCAGTGCTGACTC...GCAGAACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR TCA 90 bp GTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGGGGCCAGCCAGAGCCTaGCTGGGCCCAAATCCCTCC +
Preference number: 2 (lower is better)
Translates to: VPDFPGLTFLDSNHSCLAGPARA*LGPNPS
Trigger: GGAGGGATTTGGGCCCAGTCAGGCTCTGGCTGGCCC...CGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTGGGAAGTCGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR TCA 90 bp AGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAACAGGTCCATGCTTCCGGCTGGGTGTaGCATCTCATGGGCACTACC +
Preference number: 2 (lower is better)
Translates to: RPPAPLPHTVPEGCQQVHASGWV*HLMGTT
Trigger: GGTAGTGCCCATGAGATGTCACACCCAGCCGGAAGC...ATGGACCTGTTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR-3UTR TCA 90 bp GCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGCTGCTTAGTACCCTGTaGGAAGACAAAGACCATCCG +
Preference number: 2 (lower is better)
Translates to: AISSGPASLPDGQICRRVLLSTL*EDKDHP
Trigger: CGGATGGTCTTTGTCTTCTCACAGGGTACTAAGCAG...CACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR-3UTR GCA 90 bp CAGAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGCATTCTAACGCAAGCTaGTGGCCATGCCCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: QRPPGGSCLTSHPCAPAWHSNAS*WPCPSR
Trigger: TCTGGAGGGGCATGGCCAGCAGCTTGCGTTAGAATG...CCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR GCA 90 bp GCCTTTAGAAATGGGACAAAGTCATGCCCTGCCCCCATGGATACATCCCCTTTCGGGCGATGTAGTAGGTaGCCCCCGCCCTCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: AFRNGTKSCPAPMDTSPFGRCSR*PPPSSP
Trigger: AGGGGAGGAGGGCGGGGGGCACCTACTACATCGCCC...GAAAGGGGATGTATCCATGGGGGCAGGGCATGACTTTGTCCCATTTCTAAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp ACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTGCCTCCTATCTGGGCAGGTGACTaGCCCAGGTGGCAGGACGTC +
Preference number: 2 (lower is better)
Translates to: TGHPQPLLVCLAPSQLPPIWAGD*PRWQDV
Trigger: GACGTCCTGCCACCTGGGGCAGTCACCTGCCCAGAT...AGGAGGCAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp AATCTTCCTCTCCAGATCCAGACGGGCCAGGGTGGCTTCATCTGCTTCCTGTCTAGCTCCACATGGACCTaGTGTCGGGCCAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: NLPLQIQTGQGGFICFLSSSTWT*CRASCS
Trigger: GGAGCAGCTGGCCCGACAGCAGGTCCATGTGGAGCT...AGACAGGAAGCAGATGAAGCCACCCTGGCCCGTCTGGATCTGGAGAGGAAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR-3UTR GCA 90 bp ACGTCCTGGGCTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTCCCCAGCAGCCAACGTaGTATCTGGAGTTCCAAACG +
Preference number: 2 (lower is better)
Translates to: TSWAGHCSSWENDAVQALPQQPT*YLEFQT
Trigger: CGTTTGGAACTCCAGATAGCACGTTGGCTGCTGGGG...AAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAGCCCAGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR-3UTR GCA 90 bp TCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCCTTCCCACGAGGCCCTaGTGTACTGACCTCGAATCT +
Preference number: 2 (lower is better)
Translates to: SLPVKLGKAPCLRGRQLTLPTRP*CTDLES
Trigger: AGATTCGAGGTCAGTACAGCAGGGCCTCGTGGGAAG...GGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR-3UTR CCA 90 bp ATTCTCTTTCTCTCCCTGGCAAGCAAGGCCCCCGAGTTTGAGGGTGAGAAAGAGGGAGTTGCTGGGTGCTaGGTGGGTGCCGTCTGGCAG +
Preference number: 2 (lower is better)
Translates to: ILFLSLASKAPEFEGEKEGVAGC*VGAVWQ
Trigger: CTGCCAGACGGCACCCACCCAGCACCCAGCAACTCC...CTCTTTCTCACCCTCAAACTCGGGGGCCTTGCTTGCCAGGGAGAGAAAGAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CCA 90 bp CCCAGGTGGCAGGACGTCCCCACCCATCTTAGACTGATCAGGGTCAGTCTAGGAGTTAGTTGGAGTTGCTaGGTGCTGGGTGGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: PRWQDVPTHLRLIRVSLGVSWSC*VLGGCR
Trigger: ACGGCACCCACCCAGCACCCAGCAACTCCAACTAAC...TCCTAGACTGACCCTGATCAGTCTAAGATGGGTGGGGACGTCCTGCCACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp CCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGTCATCGCTCAGGAGGTCCTCTAACGCAAGCTGCTaGCCATGCCCCTCCAGACTG +
Preference number: 2 (lower is better)
Translates to: PGWQLRWTETLESSLRRSSNASC*PCPSRL
Trigger: CAGTCTGGAGGGGCATGGCCAGCAGCTTGCGTTAGA...GGACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp GACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGAATATGAGCCAGTGTGACAAAACAAGCCTCTaGCCAGGGCTACCTTGTCTG +
Preference number: 2 (lower is better)
Translates to: DVSALSTRPPGCRNMSQCDKTSL*PGLPCL
Trigger: CAGACAAGGTAGCCCTGGCCAGAGGCTTGTTTTGTC...ACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp GGGCAGAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTGGATGGCAGCTCAGGTaGACTGAGACACTTGAGTCA +
Preference number: 2 (lower is better)
Translates to: GQRPPGGSCLTSHPCAPAGWQLR*TETLES
Trigger: TGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCC...AGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CCA 90 bp AGGACACCAAGTCTTGGGGAGAGGGAAGGACCCTTCTTCGGCCTTAGAGGGGAGCACAGATGGCATCCCTaGATGGCAGCTCAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: RTPSLGEREGPFFGLRGEHRWHP*MAAQVD
Trigger: GTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTG...CTCCCCTCTAAGGCCGAAGAAGGGTCCTTCCCTCTCCCCAAGACTTGGTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp GGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTGGCTTCATGCATGTTGCTaGACGCCATTGCCTCATACT +
Preference number: 2 (lower is better)
Translates to: GGAAPRCGQQRLSGLQTWLHACC*TPLPHT
Trigger: AGTATGAGGCAATGGCGTCCAGCAACATGCATGAAG...CCAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR-3UTR CCA 90 bp GCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCTACCACGTCCTGGGCTaGGCACTGCAGTTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: ACSGICRQGRCQALTQFCYHVLG*ALQFLG
Trigger: TCCCAGGAACTGCAGTGCCCAGCCCAGGACGTGGTA...GCAGAACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR CCA 90 bp TGTGGTTGGAGTGGCGTGGCGGATACGCCAAATCCCCTCTTCCCATTCCCCTGGTTCTCTTTCTCTCCCTaGCAAGCAAGGCCCCCGAGT +
Preference number: 2 (lower is better)
Translates to: CGWSGVADTPNPLFPFPWFSFSP*QARPPS
Trigger: ACTCGGGGGCCTTGCTTGCCAGGGAGAGAAAGAGAA...CCAGGGGAATGGGAAGAGGGGATTTGGCGTATCCGCCACGCCACTCCAACCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CCA 90 bp CGTCATGCCTGGCGAGTGGTAAGCTGCTGGAGTAAGATGAGCTCCCACTGTGGTGTGGTTGGAGTGGCGTaGCGGATACGCCAAATCCCC +
Preference number: 2 (lower is better)
Translates to: RHAWRVVSCWSKMSSHCGVVGVA*RIRQIP
Trigger: GGGGATTTGGCGTATCCGCCACGCCACTCCAACCAC...ACCACAGTGGGAGCTCATCTTACTCCAGCAGCTTACCACTCGCCAGGCATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CCA 90 bp CAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTTCCCTTTGACCCATTCTTaGGTGAGCGCCAGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: QVQPASRMARYAGGWVSFPLTHS*VSASVL
Trigger: GAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGG...GAAGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
3UTR-3UTR CCA 90 bp TGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATCTGTCCTCAGTCCCAGTCTaGAGCAACCTACAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: CLRGRQLTASRRRSIYNLSSVPV*SNLQAL
Trigger: CAGGGCCTGTAGGTTGCTCCAGACTGGGACTGAGGA...CAGATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR-3UTR TCA 90 bp TCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCCAGTTCCTGGGAAAATaGCGCAGTCCAGGCCCTTTA +
Preference number: 2 (lower is better)
Translates to: SLPVKLGKAPCLRGRQLTQFLGK*RSPGPL
Trigger: TAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTG...GGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR TCA 90 bp AGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGAGACAGAGAAGAATCCTCTGAACTaGGTCAGCACTGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: RHSETQGALPVTGRGETEKNPLN*VSTELS
Trigger: GCTCAGCTCAGTGCTGACTCAGTTCAGAGGATTCTT...CTCTGTCTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp AGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCGCGGAGCAACTATCCTaGTTCTGCTCGGGCCCCTCA +
Preference number: 2 (lower is better)
Translates to: RDSVLVQVGPGKVPSHQLAEQLS*FCSGPS
Trigger: TGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGC...GAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR-3UTR GCA 90 bp CACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTGCCTCCTCCTCCAAGGTCTGGGGAAATGTaGCAGCAGAGGCGGAGCAAC +
Preference number: 2 (lower is better)
Translates to: HPQPLLVCLAPSQLPPPPRSGEM*QQRRSN
Trigger: GTTGCTCCGCCTCTGCTGGCACATTTCCCCAGACCT...TGGAGGAGGAGGCAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp CTGTGCTCCTGTGGGCATGGGGGCTCCAGGCCTTTGAAATTGTGGAGAAGGAAACATGCCCCTCCAGACTaGCCCTTGGGGGTGAGTTTC +
Preference number: 2 (lower is better)
Translates to: LCSCGHGGSRPLKLWRRKHAPPD*PLGVSF
Trigger: GAAACTCACCCCCAAGGGGCAGTCTGGAGGGGCATG...TTTCCTTCTCCACAATTTCAAAGGCCTGGAGCCCCCATGCCCACAGGAGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR-3UTR GCA 90 bp TATGGGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCCATTCTAACGCAAGCTaGTGGCCATGCCCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: YGHLHVFTTFWEWTPCDRHSNAS*WPCPSR
Trigger: TCTGGAGGGGCATGGCCAGCAGCTTGCGTTAGAATG...GCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR-3UTR GCA 90 bp ACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACCCTGTGAGAAGACAAAGACCGCAGGGTGTGCTAGTTaGTGGCTTCCGGCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: TPEVLVRSCLVPCEKTKTAGCAS*WLPAGC
Trigger: ACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGC...GGTCTTTGTCTTCTCACAGGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR-3UTR GCA 90 bp CATCCACTGGGAATAAATTGCCTTGCACTTGGCGGCTTCCTCTGCAGATTGTTGGTGACCGCTGCGGAGTaGGTGGGGAGCAGTGGCGCA +
Preference number: 2 (lower is better)
Translates to: HPLGINCLALGGFLCRLLVTAAE*VGSSGA
Trigger: TGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCAC...CAACAATCTGCAGAGGAAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
3UTR-3UTR GCA 90 bp GCAGCTCCACTGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGGACAGGGGCAGCTaGAAGCCCCACCTAGAAGTA +
Preference number: 2 (lower is better)
Translates to: AAPLRTQGLTTFTTNKLCQDRGS*KPHLEV
Trigger: TACTTCTAGGTGGGGCTTGCAGCTGCCCCTGTCCTG...GCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCAGTGGAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp CTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTAGGGGAAGCCACTCAGAAGGGCAGTaGTTGCTCAGGGATCTGCAG +
Preference number: 2 (lower is better)
Translates to: LGTAVPGKMTQSRPFRGSHSEGQ*LLRDLQ
Trigger: CTGCAGATCCCTGAGCAAGCACTGCCCTTCTGAGTG...GCTTCCCCTAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp TCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCAGGTTGGAGAAGGTCTaGACGGGAATGGTGATCCTG +
Preference number: 2 (lower is better)
Translates to: SLPVKLGKAPCLRGRQLTRLEKV*TGMVIL
Trigger: CAGGATCACCATTCCCGTGCAGACCTTCTCCAACCT...GGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR-3UTR GCA 90 bp AGGGCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGAGCTGGATCCCTTTaGCCTGATCCTCAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: RAVLAQGSADRADVKLSPRAGSL*PDPQSQ
Trigger: CTGGGACTGAGGATCAGGGCAAAGGGATCCAGCTCT...GGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR-3UTR CCA 90 bp GACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGAATATGAGCCAGTGTCCTCTGAGCTGGGCATaGTGGCTCCAATCTATAATC +
Preference number: 2 (lower is better)
Translates to: DVSALSTRPPGCRNMSQCPLSWA*WLQSII
Trigger: GATTATAGATTGGAGCCACCATGCCCAGCTCAGAGG...ACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp TCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGAATATGAGCCAGTGTCTTCACAACAACCCTCTGAGCTaGGCATGGTGGCTCCAATCT +
Preference number: 2 (lower is better)
Translates to: SALSTRPPGCRNMSQCLHNNPLS*AWWLQS
Trigger: AGATTGGAGCCACCATGCCCAGCTCAGAGGGTTGTT...GTGAAGACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp CCACGTACACAACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTGCCCACGATGGCATCCCTGGATaGCAGCTCAGGTGGACTGAG +
Preference number: 2 (lower is better)
Translates to: PRTQQIPQVLRIKLPPAHDGIPG*QLRWTE
Trigger: CTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATC...GTGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGTTGTGTACGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp CTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCACCACTGTGGTTGGAGTaGCGTGGCGGATACGCCAAA +
Preference number: 2 (lower is better)
Translates to: LLLGLLNDLQGTGNVHSAPLWLE*RGGYAK
Trigger: TTTGGCGTATCCGCCACGCCACTCCAACCACAGTGG...TGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CCA 90 bp ACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGTCATCGAGCTGCCTTGCGTGGTaGACAGAGGGGGTGGTGAGA +
Preference number: 2 (lower is better)
Translates to: TDGIPGWQLRWTETLESSSCLAW*TEGVVR
Trigger: TCTCACCACCCCCTCTGTCCACCACGCAAGGCAGCT...CGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CCA 90 bp TGTCGGGCCAGCTGCTCCTGGAGTTCCCGAACCTCCTCCTCGTGGATCTTCCTCAGGTTGGTTTCATCCTaGAGCTTCTGCCTCACAGTG +
Preference number: 2 (lower is better)
Translates to: CRASCSWSSRTSSSWIFLRLVSS*SFCLTV
Trigger: CACTGTGAGGCAGAAGCTCCAGGATGAAACCAACCT...GAGGAAGATCCACGAGGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR CAA 90 bp GGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTaGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGC +
Preference number: 2 (lower is better)
Translates to: GSDMLTRFSIRMFSL*VFRAQSEDSGLYFC
Trigger: GCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
3UTR CAA 90 bp GTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTaGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTC +
Preference number: 2 (lower is better)
Translates to: VGSDMLTRFSIRMFS*LVFRAQSEDSGLYF
Trigger: GAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
3UTR-3UTR TCA 90 bp CGTCATGCCTGGCGAGTGGTAAGCTGCTGGAGTAAGATGAGCTCCCACTGTGGTCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: RHAWRVVSCWSKMSSHCGLEVAF*HRLGVQ
Trigger: CTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAG...ACCACAGTGGGAGCTCATCTTACTCCAGCAGCTTACCACTCGCCAGGCATGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR GCA 90 bp GTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGACTCCTTAATGACGCGGAGCAACTATCCTaGTTCTGCTCGGGCCCCTCA +
Preference number: 2 (lower is better)
Translates to: VGPASHHILVLLLGLLNDAEQLS*FCSGPS
Trigger: TGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGC...GTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR GCA 90 bp CTCTATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGCATTCTAACGCAAGCTaGTGGCCATGCCCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: LYPSQHLIPLHVHNRSPKHSNAS*WPCPSR
Trigger: TCTGGAGGGGCATGGCCAGCAGCTTGCGTTAGAATG...CTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGATAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp GTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGCTGAGGTGGGTAGACTaGTTGAGCCCAGGAGTTCAA +
Preference number: 2 (lower is better)
Translates to: VPTDGIPGWQLRWTETLELRWVD*LSPGVQ
Trigger: TTGAACTCCTGGGCTCAAGCAGTCTACCCACCTCAG...CTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp CCACCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTGCACTGGGGTCTGAGGTGGGTAGACTaGTTGAGCCCAGGAGTTCAA +
Preference number: 2 (lower is better)
Translates to: PPVCSPVCSVKAEWVHWGLRWVD*LSPGVQ
Trigger: TTGAACTCCTGGGCTCAAGCAGTCTACCCACCTCAG...ACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp TCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGAATATGAGCCAGTGTCTTCACAATGGGACAAAGTCATaGCCTGCCCCCATGGATACA +
Preference number: 2 (lower is better)
Translates to: SALSTRPPGCRNMSQCLHNGTKS*PAPMDT
Trigger: TGTATCCATGGGGGCAGGGCATGACTTTGTCCCATT...GTGAAGACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp GCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCCAGAAGGGCAGTGCTTaGTCAGGGATCTGCAGACAG +
Preference number: 2 (lower is better)
Translates to: ACSGICRQGRCQALTQFCQKGSA*SGICRQ
Trigger: CTGTCTGCAGATCCCTGAGCAAGCACTGCCCTTCTG...GCAGAACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR CCA 90 bp CACATCCTTGTGCTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTTAGTTGGAGTTGCTaGGTGCTGGGTGGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: HILVLLLGLLNDLQGTGNVSWSC*VLGGCR
Trigger: ACGGCACCCACCCAGCACCCAGCAACTCCAACTAAC...GTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CCA 90 bp CTCTATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGGAGGCCAAGTGCAACTaGTCACCCACAACCCCTACT +
Preference number: 2 (lower is better)
Translates to: LYPSQHLIPLHVHNRSPKEAKCN*SPTTPT
Trigger: AGTAGGGGTTGTGGGTGACCAGTTGCACTTGGCCTC...CTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGATAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp ATCTGCTTCCTGTCTATAGGCAGCCAGGTTGTTCTCGGCTTCCAGCCTCAGGTTACGTCAAGCTCCACATaGACCTGCTGTCGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: ICFLSIGSQVVLGFQPQVTSSST*TCCRAS
Trigger: GCTGGCCCGACAGCAGGTCCATGTGGAGCTTGACGT...AACCTGAGGCTGGAAGCCGAGAACAACCTGGCTGCCTATAGACAGGAAGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR-3UTR CCA 90 bp CCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTCTTACTTTTCTGTGGTTGGAGTGGCGTaGCGGATACGCCAAATCCCC +
Preference number: 2 (lower is better)
Translates to: PRGCVTLGSPRLPRSYFSVVGVA*RIRQIP
Trigger: GGGGATTTGGCGTATCCGCCACGCCACTCCAACCAC...AGAAAAGTAAGACCTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CCA 90 bp TGTGGTTGGAGTGGCGTGGCGGATACGCCAAATCCCCTCTTCCCATTCCCCTGGCTTCTGACACAGACTTaGTGTCCAGGCTGGTTTTCC +
Preference number: 2 (lower is better)
Translates to: CGWSGVADTPNPLFPFPWLLTQT*CPGWFS
Trigger: GGAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAG...CCAGGGGAATGGGAAGAGGGGATTTGGCGTATCCGCCACGCCACTCCAACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CCA 90 bp TTTCTCTCCCTGGCAAGCAAGGCCCCCGAGTTTGAGGGTGAGAAAGAGAGAGTGCAGCCAGAGCCTGACTaGGCCCAAATCCCTCCTTAC +
Preference number: 2 (lower is better)
Translates to: FLSLASKAPEFEGEKERVQPEPD*AQIPPY
Trigger: GTAAGGAGGGATTTGGGCCCAGTCAGGCTCTGGCTG...CACTCTCTCTTTCTCACCCTCAAACTCGGGGGCCTTGCTTGCCAGGGAGAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CCA 90 bp CACATCCTTGTGCTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACCCAGGCTTTCCTCCATaGCCTGGCCTTGAGAATCCC +
Preference number: 2 (lower is better)
Translates to: HILVLLLGLLNDLQGTGNPGFPP*PGLENP
Trigger: GGGATTCTCAAGGCCAGGCCATGGAGGAAAGCCTGG...GTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CCA 90 bp CTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCAACATCCCTGGGGAGCTACTaGGAGTTGCTGGGAACCTTC +
Preference number: 2 (lower is better)
Translates to: LLGLLNDLQGTGNVHSATSLGSY*ELLGTF
Trigger: GAAGGTTCCCAGCAACTCCCAGTAGCTCCCCAGGGA...TGTTGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CCA 90 bp GCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTGGTAGGAACATGTaGACAAATCTGTTACAGCCT +
Preference number: 2 (lower is better)
Translates to: AISSGPASLPDGQICRRVGGRNM*TNLLQP
Trigger: AGGCTGTAACAGATTTGTCCACATGTTCCTACCACC...CACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
3UTR-3UTR CCA 90 bp TCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTGTGCCTTTGACCCATTCTTaGGTGAGCGCCAGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: SHGHYPASFSDPETRSAVPLTHS*VSASVL
Trigger: GAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGG...CACAGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
3UTR CAA 90 bp ACCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: TSPSRISTVFTTMFL*RWPSDTDLVSRLVF
Trigger: GAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR TCA 90 bp CTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTAGGGGAAGCAAGAATCCTCTGAACTaGGTCAGCACTGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: LGTAVPGKMTQSRPFRGSKNPLN*VSTELS
Trigger: GCTCAGCTCAGTGCTGACTCAGTTCAGAGGATTCTT...GCTTCCCCTAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR TCA 90 bp AGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAACAGGTCCATGAAGATTGTGCTGGTTaGGTTGCAGGTAGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: RPPAPLPHTVPEGCQQVHEDCAG*VAGSRE
Trigger: CTCCCTGCTACCTGCAACTCAACCAGCACAATCTTC...ATGGACCTGTTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
3UTR-3UTR GCA 90 bp AAGTGCAACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTCATGCCCCTCCAGACTaGCCCTTGGGGGTGAGTTTC +
Preference number: 2 (lower is better)
Translates to: KCNWSPTTPTCMPSAIPIHAPPD*PLGVSF
Trigger: GAAACTCACCCCCAAGGGGCAGTCTGGAGGGGCATG...AATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp AGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTAATCCAGAGGCCAAGTaGAACTGGTCACCCACAACC +
Preference number: 2 (lower is better)
Translates to: RPVLLRHPQGGLLLRLRCNPEAK*NWSPTT
Trigger: GGTTGTGGGTGACCAGTTGCACTTGGCCTCTGGATT...ACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR-3UTR GCA 90 bp ACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGAAGGACAAAGTCATGCCCTaGCCCCATGGATACATCCCC +
Preference number: 2 (lower is better)
Translates to: TMGWRGSDVWQWLTGVKKDKVMP*PHGYIP
Trigger: GGGGATGTATCCATGGGGGCAGGGCATGACTTTGTC...CTTCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp ACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTGCCTCCTCAGATCCCACCAGTCTaGTCACCAGTCTGCTCAGTC +
Preference number: 2 (lower is better)
Translates to: TGHPQPLLVCLAPSQLPPQIPPV*SPVCSV
Trigger: GACTGAGCAGACTGGTGAGCAGACTGGTGGGATCTG...AGGAGGCAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp TGGATCTTCCTCAAGAACCGGATCTCCTCCTCCAGCGACTCAATCTTCCTCTCCGATCTCTTTCAGGGCTaGGGTGAGGTCTGGCTTGGC +
Preference number: 2 (lower is better)
Translates to: WIFLKNRISSSSDSIFLSDLFQG*GEVWLG
Trigger: GCCAAGCCAGACCTCACCGCAGCCCTGAAAGAGATC...GGAGAGGAAGATTGAGTCGCTGGAGGAGGAGATCCGGTTCTTGAGGAAGATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR-3UTR GCA 90 bp TGGATCTTCCTCAAGAACCGGATCTCCTCCTCCAGCGACTCAATCTTCCTCTCCTCATCCTGGAGCTTCTaGCTCACAGTGGCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: WIFLKNRISSSSDSIFLSSSWSF*LTVARS
Trigger: GGACCTGGCCACTGTGAGGCAGAAGCTCCAGGATGA...GGAGAGGAAGATTGAGTCGCTGGAGGAGGAGATCCGGTTCTTGAGGAAGATCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR-3UTR CCA 90 bp CAGAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGGAGTTTCTTGTTAGTTaGAGTTGCTGGGTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: QRPPGGSCLTSHPCAPAWEFLVS*SCWVLG
Trigger: ACCCAGCACCCAGCAACTCCAACTAACAAGAAACTC...CCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CCA 90 bp ATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTCTAACGCAAGCTGCTaGCCATGCCCCTCCAGACTG +
Preference number: 2 (lower is better)
Translates to: IRMFSLLVFRAQSEDSGLSNASC*PCPSRL
Trigger: CAGTCTGGAGGGGCATGGCCAGCAGCTTGCGTTAGA...CAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR-3UTR CCA 90 bp CCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTCTTACTTTTCTCACAGGAGGCTGAGGTaGGTAGACTGCTTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: PRGCVTLGSPRLPRSYFSHRRLR*VDCLSP
Trigger: TGGGCTCAAGCAGTCTACCCACCTCAGCCTCCTGTG...AGAAAAGTAAGACCTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CCA 90 bp TGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACAGAGGCCAAGTGCAACTaGTCACCCACAACCCCTACT +
Preference number: 2 (lower is better)
Translates to: CTSAAPARGTTFTPTMWTEAKCN*SPTTPT
Trigger: AGTAGGGGTTGTGGGTGACCAGTTGCACTTGGCCTC...TGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR-3UTR CCA 90 bp AGACACTTGAGTCATCGCTCAGGAGGTCCTTCTGGGATCTGGGCAGGTGACTGCTTACCAAGCTGGAAATaGAAAGCCCTCCCCATCCCC +
Preference number: 2 (lower is better)
Translates to: RHLSHRSGGPSGIWAGDCLPSWK*KALPIP
Trigger: GGGGATGGGGAGGGCTTTCCATTTCCAGCTTGGTAA...GCAGTCACCTGCCCAGATCCCAGAAGGACCTCCTGAGCGATGACTCAAGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CCA 90 bp TCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGAATATGAGCCAGTGTCTTCACTTCCTTTTACCAAGCTaGAAATGGAAAGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: SALSTRPPGCRNMSQCLHFLLPS*KWKALP
Trigger: GGGGAGGGCTTTCCATTTCCAGCTTGGTAAAAGGAA...GTGAAGACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CCA 90 bp CTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCAGCTACTGGGAGTTGCTaGGAACCTTCTATGTGCCAG +
Preference number: 2 (lower is better)
Translates to: LLLGLLNDLQGTGNVHSAATGSC*EPSMCQ
Trigger: CTGGCACATAGAAGGTTCCCAGCAACTCCCAGTAGC...TGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CCA 90 bp CTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAAGGTGTATGTCCTCTTTaGCTCTCCATCCCGCATCTC +
Preference number: 2 (lower is better)
Translates to: LGQRPPAPLPHTVPEGCQGVCPL*LSIPHL
Trigger: GAGATGCGGGATGGAGAGCCAAAGAGGACATACACC...TTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639042.1
3UTR CAA 90 bp GTGAGGGAATGGTGGCCACTTTCCAGGACAAGGGCCAGGAGCCCTTaGCAGATGAATACTATGGGCACCTCCATGTCTTCACCACCTTCT +
Preference number: 2 (lower is better)
Translates to: VREWWPLSRTRARSP*QMNTMGTSMSSPPS
Trigger: AGAAGGTGGTGAAGACATGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCTTGTCCTGGAAAGTGGCCACCATTCCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR-3UTR TCA 90 bp GACCAGGGCCTAGCAGGACAGGGGCAGCTGCAAGCCCCACCTAGAAGTACCCTGCCATTTACAATCTGGTaGGCCTGTATTGGTATAACT +
Preference number: 2 (lower is better)
Translates to: DQGLAGQGQLQAPPRSTLPFTIW*ACIGIT
Trigger: AGTTATACCAATACAGGCTCACCAGATTGTAAATGG...CAGGGTACTTCTAGGTGGGGCTTGCAGCTGCCCCTGTCCTGCTAGGCCCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp AACAGTTTCCATAACAACAGGAATCAGGGATGTGGAGGGCGATGTAGTAGGTGCGTTGGAGTTGCTGGGTaGTGGGTGGGTGCCGTCTGG +
Preference number: 2 (lower is better)
Translates to: NSFHNNRNQGCGGRCSRCVGVAG*WVGAVW
Trigger: CCAGACGGCACCCACCCAGCACCCAGCAACTCCAAC...GCACCTACTACATCGCCCTCCACATCCCTGATTCCTGTTGTTATGGAAACTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp GAGAAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCGACAAAGTCATGCCCTaGCCCCATGGATACATCCCC +
Preference number: 2 (lower is better)
Translates to: EKTKTIREGVLAIINYVSDKVMP*PHGYIP
Trigger: GGGGATGTATCCATGGGGGCAGGGCATGACTTTGTC...GGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR-3UTR GCA 90 bp TGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGCCAGAGCAGCTCCACTaGGCACCCAAGGACTCACCA +
Preference number: 2 (lower is better)
Translates to: CAPKDSPPLPLTSSASLMPEQLH*APKDSP
Trigger: TGGTGAGTCCTTGGGTGCGCAGTGGAGCTGCTCTGG...CATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp TGGATCTTCCTCAAGAACCGGATCTCCTCCTCCAGCGACTCAATCTTCCTCTCCAGTGGCCAGGTCCTGTaGCAGATTGTCCCTCTCAAC +
Preference number: 2 (lower is better)
Translates to: WIFLKNRISSSSDSIFLSSGQVL*QIVPLN
Trigger: GTTGAGAGGGACAATCTGGCACAGGACCTGGCCACT...GGAGAGGAAGATTGAGTCGCTGGAGGAGGAGATCCGGTTCTTGAGGAAGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR-3UTR GCA 90 bp GCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGTTCTGTCGTTGCTGCTaGTACTTATTTCACTGTTGT +
Preference number: 2 (lower is better)
Translates to: AISSGPASLPDGQICRRVFCRCC*YLFHCC
Trigger: ACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAA...CACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR-3UTR CCA 90 bp CTCTATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGCCTCTGAGCTGGGCATaGTGGCTCCAATCTATAATC +
Preference number: 2 (lower is better)
Translates to: LYPSQHLIPLHVHNRSPKPLSWA*WLQSII
Trigger: GATTATAGATTGGAGCCACCATGCCCAGCTCAGAGG...CTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGATAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp CTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATCCAGAACCTCTGAGCTGGGCATaGTGGCTCCAATCTATAATC +
Preference number: 2 (lower is better)
Translates to: LRHPQGGLLLRLRCGHPEPLSWA*WLQSII
Trigger: GATTATAGATTGGAGCCACCATGCCCAGCTCAGAGG...TTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR-3UTR CCA 90 bp AAGTGCAACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTCACAGATGGCATCCCTaGATGGCAGCTCAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: KCNWSPTTPTCMPSAIPIHRWHP*MAAQVD
Trigger: GTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTG...AATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp TTTCTCTCCCTGGCAAGCAAGGCCCCCGAGTTTGAGGGTGAGAAAGAGAGAGTGTTACCAAGCTGGAAATaGAAAGCCCTCCCCATCCCC +
Preference number: 2 (lower is better)
Translates to: FLSLASKAPEFEGEKERVLPSWK*KALPIP
Trigger: GGGGATGGGGAGGGCTTTCCATTTCCAGCTTGGTAA...CACTCTCTCTTTCTCACCCTCAAACTCGGGGGCCTTGCTTGCCAGGGAGAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CCA 90 bp AGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGACTTTCCTTTTACCAAGCTaGAAATGGAAAGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: RPPGGSCLTSHPCAPAWTFLLPS*KWKALP
Trigger: GGGGAGGGCTTTCCATTTCCAGCTTGGTAAAAGGAA...AGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CCA 90 bp GCCTTTAGAAATGGGACAAAGTCATGCCCTGCCCCCATGGATACATCCCCTTTCCCACTGTGGTTGGAGTaGCGTGGCGGATACGCCAAA +
Preference number: 2 (lower is better)
Translates to: AFRNGTKSCPAPMDTSPFPLWLE*RGGYAK
Trigger: TTTGGCGTATCCGCCACGCCACTCCAACCACAGTGG...GAAAGGGGATGTATCCATGGGGGCAGGGCATGACTTTGTCCCATTTCTAAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CCA 90 bp ATTCTCTTTCTCTCCCTGGCAAGCAAGGCCCCCGAGTTTGAGGGTGAGAAAGAGTCCTCCAGAATTCCCTaGGGAGCTACTGGGAGTTGC +
Preference number: 2 (lower is better)
Translates to: ILFLSLASKAPEFEGEKESSRIP*GATGSC
Trigger: GCAACTCCCAGTAGCTCCCCAGGGAATTCTGGAGGA...CTCTTTCTCACCCTCAAACTCGGGGGCCTTGCTTGCCAGGGAGAGAAAGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR CAA 90 bp TTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTaGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: FEVLNFPLETQFLCR*GLGKSQAISSGPAS
Trigger: GCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
3UTR-3UTR TCA 90 bp CGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTAGAGTCAGCACTGAGCTaGGCGATGGAGCCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: RTQGLTTFTTNKLCQFNVESALS*AMEPQG
Trigger: TCCCTGAGGCTCCATCGCTCAGCTCAGTGCTGACTC...TACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR TCA 90 bp AGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAACAGGTCCATAGCTCTCTTCAGCTCTaGAGACCAGTTGTCCTTCAA +
Preference number: 2 (lower is better)
Translates to: RPPAPLPHTVPEGCQQVHSSLQL*RPVVLQ
Trigger: TTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCT...ATGGACCTGTTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR-3UTR TCA 90 bp AAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAAACTCGTTCTCAGATCCTaGGACTCGCTCGGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: KTKTIREGVLAIINYVSKLVLRS*DSLGCG
Trigger: TCCACAGCCGAGCGAGTCTCAGGATCTGAGAACGAG...TTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR-3UTR GCA 90 bp ACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGAAGAATGGGACAAAGTCATaGCCTGCCCCCATGGATACA +
Preference number: 2 (lower is better)
Translates to: TMGWRGSDVWQWLTGVKKNGTKS*PAPMDT
Trigger: TGTATCCATGGGGGCAGGGCATGACTTTGTCCCATT...CTTCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp AAGTGCAACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTGACTCCTTAATGACCTaGAGGGGACAGGGAACGTGC +
Preference number: 2 (lower is better)
Translates to: KCNWSPTTPTCMPSAIPIDSLMT*RGQGTC
Trigger: GCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTC...AATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR GCA 90 bp CACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTGCCTCCTCCTCCAACATCCTTGTGCTCCTaGTTGGACTCCTTAATGACC +
Preference number: 2 (lower is better)
Translates to: HPQPLLVCLAPSQLPPPPTSLCS*LDSLMT
Trigger: GGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGT...TGGAGGAGGAGGCAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR GCA 90 bp CTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCAACATCCTTGTGCTCCTaGTTGGACTCCTTAATGACC +
Preference number: 2 (lower is better)
Translates to: LLLGLLNDLQGTGNVHSATSLCS*LDSLMT
Trigger: GGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGT...TGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR GCA 90 bp CTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGTGGTGGACAGAGGGGGTGTGGGAACCTTCTATGTaGCAGCCCCAGGCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: LTFLDSNHSCLAWWTEGVWEPSM*QPQAFL
Trigger: GAGGAAAGCCTGGGGCTGGCACATAGAAGGTTCCCA...CACCCCCTCTGTCCACCACGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CCA 90 bp AGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAAGCTCCCACTGTGGTTaGAGTGGCGTGGCGGATACG +
Preference number: 2 (lower is better)
Translates to: RLCNLGKSPTSQVLLFLISSHCG*SGVADT
Trigger: CGTATCCGCCACGCCACTCCAACCACAGTGGGAGCT...TATCAAGAAAAGTAAGACCTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CCA 90 bp AGCTCTGCCAGTTTAATGTACAGTTACTCTGTACCACGTCCTGGGCTGGGCACTAGTTCTGCTGTCGAATaGGGTGCAGGGAGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: SSASLMYSYSVPRPGLGTSSAVE*GAGRGR
Trigger: TCTTCCCCTCCCTGCACCCCATTCGACAGCAGAACT...AGTGCCCAGCCCAGGACGTGGTACAGAGTAACTGTACATTAAACTGGCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR CAA 90 bp ACAGCCTATGGAGGGACTGAGGAAACGGAATTACATTCAGTTTCCTaGCTCTCCTCCAGAATTCCCTGGGGAGCTACTGGGAGTTGCTGG +
Preference number: 2 (lower is better)
Translates to: TAYGGTEETELHSVS*LSSRIPWGATGSCW
Trigger: CCAGCAACTCCCAGTAGCTCCCCAGGGAATTCTGGAGGAGAGCAAGGAAACTGAATGTAATTCCGTTTCCTCAGTCCCTCCATAGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR GCA 90 bp GAGAGAACCTCCATCTCTGGCAACAGTTTCCATAACAACAGGAATCAGGGATGTGCGGAGCAACTATCCTaGTTCTGCTCGGGCCCCTCA +
Preference number: 2 (lower is better)
Translates to: ERTSISGNSFHNNRNQGCAEQLS*FCSGPS
Trigger: TGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGC...ACATCCCTGATTCCTGTTGTTATGGAAACTGTTGCCAGAGATGGAGGTTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp AACAGTTTCCATAACAACAGGAATCAGGGATGTGGAGGGCGATGTAGTAGGTGCAGGTCTGGGGAAATGTaGCAGCAGAGGCGGAGCAAC +
Preference number: 2 (lower is better)
Translates to: NSFHNNRNQGCGGRCSRCRSGEM*QQRRSN
Trigger: GTTGCTCCGCCTCTGCTGGCACATTTCCCCAGACCT...GCACCTACTACATCGCCCTCCACATCCCTGATTCCTGTTGTTATGGAAACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp AAGTGCAACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTAATCCAGAGGCCAAGTaGAACTGGTCACCCACAACC +
Preference number: 2 (lower is better)
Translates to: KCNWSPTTPTCMPSAIPINPEAK*NWSPTT
Trigger: GGTTGTGGGTGACCAGTTGCACTTGGCCTCTGGATT...AATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp GGCTCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCACTAACAAGCTCTaGCAGTTTAATGTACAGTTA +
Preference number: 2 (lower is better)
Translates to: GSLPVKLGKAPCLRGRQLTTNKL*QFNVQL
Trigger: TAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGT...TAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp CCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGTACAGAGGCTGCTGCTTaGTCAGAGGCCCCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: PKDSPPLPLTSSASLMYSTEAAA*SEAPEQ
Trigger: CTGCTCTGGGGCCTCTGAGCAAGCAGCAGCCTCTGT...ACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp GTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGGGAGCTACTGGGAGTTaGTGGGAACCTTCTATGTGC +
Preference number: 2 (lower is better)
Translates to: VPDFPGLTFLDSNHSCLAGATGS*WEPSMC
Trigger: GCACATAGAAGGTTCCCAGCAACTCCCAGTAGCTCC...CGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTGGGAAGTCGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CCA 90 bp ACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGAAGGAGTTTCTTGTTAGTTaGAGTTGCTGGGTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: TMGWRGSDVWQWLTGVKKEFLVS*SCWVLG
Trigger: ACCCAGCACCCAGCAACTCCAACTAACAAGAAACTC...CTTCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp CCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGTTACCACGTCCTGGGCTaGGCACTGCAGTTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: PKDSPPLPLTSSASLMYSYHVLG*ALQFLG
Trigger: TCCCAGGAACTGCAGTGCCCAGCCCAGGACGTGGTA...ACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR CCA 90 bp GCCTTTAGAAATGGGACAAAGTCATGCCCTGCCCCCATGGATACATCCCCTTTCCGAGTGGTAAGCTGCTaGAGTAAGATGAGCTCCCAC +
Preference number: 2 (lower is better)
Translates to: AFRNGTKSCPAPMDTSPFRVVSC*SKMSSH
Trigger: GTGGGAGCTCATCTTACTCCAGCAGCTTACCACTCG...GAAAGGGGATGTATCCATGGGGGCAGGGCATGACTTTGTCCCATTTCTAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CCA 90 bp CACATCCTTGTGCTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTG +
Preference number: 2 (lower is better)
Translates to: HILVLLLGLLNDLQGTGNMFLLR*PSDTDL
Trigger: CAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACAT...GTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR CAA 90 bp AGGGTGAGAAAGAGAGAGTGTGTATTAGGATCCCATCTAGTGGCTTaGGTACCAAGGCTCCCCTTAGAACAGCCTATGGAGGGACTGAGG +
Preference number: 2 (lower is better)
Translates to: RVRKRECVLGSHLVA*VPRLPLEQPMEGLR
Trigger: CCTCAGTCCCTCCATAGGCTGTTCTAAGGGGAGCCTTGGTACCAAAGCCACTAGATGGGATCCTAATACACACTCTCTCTTTCTCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR TCA 90 bp CTCGTGCCTCAGTTTTACAATTGTAAAATAGGGCACTACCTAGAATACTGGGTATGGGATCTGGGCAGGTaGCTGCCCCAGGTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: LVPQFYNCKIGHYLEYWVWDLGR*LPQVAG
Trigger: TCCTGCCACCTGGGGCAGTCACCTGCCCAGATCCCA...TACCCAGTATTCTAGGTAGTGCCCTATTTTACAATTGTAAAACTGAGGCACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp GCCTTTAGAAATGGGACAAAGTCATGCCCTGCCCCCATGGATACATCCCCTTTCCAACCCCTACTTGTATaGCTAGCGCCATCCCAATTG +
Preference number: 2 (lower is better)
Translates to: AFRNGTKSCPAPMDTSPFQPLLV*LAPSQL
Trigger: CAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTG...GAAAGGGGATGTATCCATGGGGGCAGGGCATGACTTTGTCCCATTTCTAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR GCA 90 bp TCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCACCACTAACAAGCTCTaGCAGTTTAATGTACAGTTA +
Preference number: 2 (lower is better)
Translates to: SLPVKLGKAPCLRGRQLTTTNKL*QFNVQL
Trigger: TAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGT...GGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp CTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCATACATTCAGTTTCCTTaGTCTCCTCCAGAATTCCCT +
Preference number: 2 (lower is better)
Translates to: LLLGLLNDLQGTGNVHSAYIQFP*SPPEFP
Trigger: AGGGAATTCTGGAGGAGAGCAAGGAAACTGAATGTA...TGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR GCA 90 bp CCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGTGCTCTCACCCAGTTCTaGTGTCGAATGGGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: PKDSPPLPLTSSASLMYSALTQF*CRMGCR
Trigger: CCTGCACCCCATTCGACAGCAGAACTGGGTGAGAGC...ACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR CCA 90 bp CCCCTTAGAACAGCCTATGGAGGGACTGAGGAAACGGAATTACATTCAGTTTCCTTCTCTTTCTCTCCCTaGCAAGCAAGGCCCCCGAGT +
Preference number: 2 (lower is better)
Translates to: PLRTAYGGTEETELHSVSFSFSP*QARPPS
Trigger: ACTCGGGGGCCTTGCTTGCCAGGGAGAGAAAGAGAA...GGAAACTGAATGTAATTCCGTTTCCTCAGTCCCTCCATAGGCTGTTCTAAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CCA 90 bp TTAGAACAGCCTATGGAGGGACTGAGGAAACGGAATTACATTCAGTTTCCTTGCGATGAGCTCCCACTGTaGTTGGAGTGGCGTGGCGGA +
Preference number: 2 (lower is better)
Translates to: LEQPMEGLRKRNYIQFPCDELPL*LEWRGG
Trigger: TCCGCCACGCCACTCCAACCACAGTGGGAGCTCATC...GCAAGGAAACTGAATGTAATTCCGTTTCCTCAGTCCCTCCATAGGCTGTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR TCA 90 bp TGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGAAGAATCCTCTGAACTaGGTCAGCACTGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: CAPKDSPPLPLTSSASLMKNPLN*VSTELS
Trigger: GCTCAGCTCAGTGCTGACTCAGTTCAGAGGATTCTT...CATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR GCA 90 bp GTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGCACATCACATCCTTGTaGTCCTGCTTGGACTCCTTA +
Preference number: 2 (lower is better)
Translates to: VPDFPGLTFLDSNHSCLAHITSL*SCLDSL
Trigger: TAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTG...CGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTGGGAAGTCGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CCA 90 bp CCTCCCCATCCCCAACTGTGTCTGCTAGAGTTGGAAGTGAAAGCTACTAACTTTACTTGGTGTCCAGGCTaGTTTTCCCTGTCAAGCTGG +
Preference number: 2 (lower is better)
Translates to: PPHPQLCLLELEVKATNFTWCPG*FSLSSW
Trigger: CCAGCTTGACAGGGAAAACCAGCCTGGACACCAAGT...AAAGTTAGTAGCTTTCACTTCCAACTCTAGCAGACACAGTTGGGGATGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR CAA 90 bp CTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTaGCTGCTGCTACTTATTTCACTGTTGTCCCAGCTTCTCCCCCTA +
Preference number: 2 (lower is better)
Translates to: LPAHHSSLCHHSLLS*LLLLISLLSQLLPL
Trigger: TAGGGGGAGAAGCTGGGACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR CAA 90 bp ACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTaGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: TTSFEVLNFPLETQF*CRLGLGKSQAISSG
Trigger: ACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
3UTR-3UTR TCA 90 bp CTTAGAACAGCCTATGGAGGGACTGAGGAAACGGAATTACATTCAGTTTCCTTGCCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAG +
Preference number: 2 (lower is better)
Translates to: LRTAYGGTEETELHSVSLPRCSS*GGLLTQ
Trigger: CTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGG...CAAGGAAACTGAATGTAATTCCGTTTCCTCAGTCCCTCCATAGGCTGTTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CCA 90 bp GAGAGAACCTCCATCTCTGGCAACAGTTTCCATAACAACAGGAATCAGGGATGTAACAACCCTCTGAGCTaGGCATGGTGGCTCCAATCT +
Preference number: 2 (lower is better)
Translates to: ERTSISGNSFHNNRNQGCNNPLS*AWWLQS
Trigger: AGATTGGAGCCACCATGCCCAGCTCAGAGGGTTGTT...ACATCCCTGATTCCTGTTGTTATGGAAACTGTTGCCAGAGATGGAGGTTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp GATACTCCGAGAGAACCTCCATCTCTGGCAACAGTTTCCATAACAACAGGAATCGGATGGCAGCTCAGGTaGACTGAGACACTTGAGTCA +
Preference number: 2 (lower is better)
Translates to: DTPREPPSLATVSITTGIGWQLR*TETLES
Trigger: TGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCC...GATTCCTGTTGTTATGGAAACTGTTGCCAGAGATGGAGGTTCTCTCGGAGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp AGTGTCTTCACTTTGCTCGTGCCTCAGTTTTACAATTGTAAAATAGGGCACTACGATGAGCTCCCACTGTaGTTGGAGTGGCGTGGCGGA +
Preference number: 2 (lower is better)
Translates to: SVFTLLVPQFYNCKIGHYDELPL*LEWRGG
Trigger: TCCGCCACGCCACTCCAACCACAGTGGGAGCTCATC...GTAGTGCCCTATTTTACAATTGTAAAACTGAGGCACGAGCAAAGTGAAGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CCA 90 bp CCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGTCTCGAATCTGCAGGTTaGAGAAGGTCTGCACGGGAA +
Preference number: 2 (lower is better)
Translates to: PKDSPPLPLTSSASLMYSLESAG*RRSARE
Trigger: TTCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAG...ACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR CAA 90 bp CTGGAAATGGAAAGCCCTCCCCATCCCCAACTGTGTCTGCTAGAGTaGGAAGTGAAAGCTACTAACTTTAATTCTCTTTCTCTCCCTGGC +
Preference number: 2 (lower is better)
Translates to: LEMESPPHPQLCLLE*EVKATNFNSLSLPG
Trigger: GCCAGGGAGAGAAAGAGAATTAAAGTTAGTAGCTTTCACTTCCAACTCTAGCAGACACAGTTGGGGATGGGGAGGGCTTTCCATTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CCA 90 bp GTGCCTCAGTTTTACAATTGTAAAATAGGGCACTACCTAGAATACTGGGTACATCCGGTCACTATGGGGTaGAGAGGGTCAGACGTGTGG +
Preference number: 2 (lower is better)
Translates to: VPQFYNCKIGHYLEYWVHPVTMG*RGSDVW
Trigger: CCACACGTCTGACCCTCTCCACCCCATAGTGACCGG...ATGTACCCAGTATTCTAGGTAGTGCCCTATTTTACAATTGTAAAACTGAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CCA 90 bp GAGAAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCCACTACCTAGAATACTaGGTACATTTTGTGTGTGAG +
Preference number: 2 (lower is better)
Translates to: EKTKTIREGVLAIINYVSHYLEY*VHFVCE
Trigger: CTCACACACAAAATGTACCCAGTATTCTAGGTAGTG...GGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR CAA 90 bp GTCTGGAATGTTAGAAGGGCATCTTGTACATCCACTGGGAATAAATaGCCTTGCACTTGGCGGCTTCCTCTGCAGATTGTTGCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: VWNVRRASCTSTGNK*PCTWRLPLQIVAAF
Trigger: AAAAGCAGCAACAATCTGCAGAGGAAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGGATGTACAAGATGCCCTTCTAACATTCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
3UTR-3UTR TCA 90 bp CAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGTTACAGTTCCTGGGAAAATaGCGCAGTCCAGGCCCTTTA +
Preference number: 2 (lower is better)
Translates to: QGLTTFTTNKLCQFNVQLQFLGK*RSPGPL
Trigger: TAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTG...TAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR TCA 90 bp AGTGTCTTCACTTTGCTCGTGCCTCAGTTTTACAATTGTAAAATAGGGCACTACCAGGCTGCAGGAATATaGGCCAGTGTCTTCACTTTG +
Preference number: 2 (lower is better)
Translates to: SVFTLLVPQFYNCKIGHYQAAGI*ASVFTL
Trigger: CAAAGTGAAGACACTGGCTCATATTCCTGCAGCCTG...GTAGTGCCCTATTTTACAATTGTAAAACTGAGGCACGAGCAAAGTGAAGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR TCA 90 bp CATAAAACTTTATTCACTGCAAGAGCTGCGGTCCTGAGGGAAGAATCCTCTGAATATCTTGTGACCTTGTaGTTTTCCCCGTCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: HKTLFTARAAVLREESSEYLVTL*FSPSLV
Trigger: CACCAAAGACGGGGAAAATCACAAGGTCACAAGATA...TTCAGAGGATTCTTCCCTCAGGACCGCAGCTCTTGCAGTGAATAAAGTTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638281.1
3UTR-3UTR GCA 90 bp CGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTAACCACTAACAAGCTCTaGCAGTTTAATGTACAGTTA +
Preference number: 2 (lower is better)
Translates to: RTQGLTTFTTNKLCQFNVTTNKL*QFNVQL
Trigger: TAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGT...TACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR CCA 72 bp CCTCTTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTaGCCGCCTCCCGCACGTGCCGCTCCTCCTGCTCGC +
Preference number: 3 (lower is better)
Translates to: PLPPAAPAPPDN*PPPARAAPPAR
Trigger: GCGAGCAGGAGGAGCGGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAAGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR CCA 72 bp ACTGCAACTGGCGCCGGTAGTCGTTGGCTTCGTGCTTaGCCTGGCGGAGCAGCTCCGCGTTGCGGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: TATGAGSRWLRA*PGGAAPRCGQQ
Trigger: CTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAACGACTACCGGCGCCAGTTGCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR CCA 72 bp GAAAGAAAGCAGAGGGAGAGGGCTGCCCGGGCTGCCTaGGACACCCCTAGGCTGGGTCTTGGTGCGGGGCCA +
Preference number: 3 (lower is better)
Translates to: ERKQRERAARAA*DTPRLGLGAGP
Trigger: TGGCCCCGCACCAAGACCCAGCCTAGGGGTGTCCCAGGCAGCCCGGGCAGCCCTCTCCCTCTGCTTTCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR-3UTR CAA 90 bp TTCGTGCTTGGCCTGGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCAGGCGGTGAGGTCTGGCTaGGCCACGTCAAGCTCCACA +
Preference number: 3 (lower is better)
Translates to: FVLGLAEQLRVAGSSVCQAVRSG*ATSSST
Trigger: TGTGGAGCTTGACGTGGCCAAGCCAGACCTCACCGC...CTGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR GCA 72 bp TGCGTGGGGAGCAGTGGCGCATCGGCCTCTGCTACCTaGAGAGCCCAGACCTCTCCCCACGCTACCTCAAGG +
Preference number: 3 (lower is better)
Translates to: CVGSSGASASAT*RAQTSPHATSR
Trigger: CCTTGAGGTAGCGTGGGGAGAGGTCTGGGCTCTGCAGGTAGCAGAGGCCGATGCGCCACTGCTCCCCACGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR GCA 72 bp TTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTaGGGAGTGCGTGGGGAGCAGTGGCGCATCGGCCTC +
Preference number: 3 (lower is better)
Translates to: FTTFWEWTPCDR*GVRGEQWRIGL
Trigger: GAGGCCGATGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR-3UTR CAA 90 bp TCGTGCTTGGCCTGGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCAGGTCGGCTTCATGCATGTaGCTGGACGCCATTGCCTCA +
Preference number: 3 (lower is better)
Translates to: SCLAWRSSSALRAAASVRSASCM*LDAIAS
Trigger: TGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGA...CCTGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR-3UTR CAA 90 bp AAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCCTCGAATCTGCAGGTaGGAGAAGGTCTGCACGGGA +
Preference number: 3 (lower is better)
Translates to: KLGKAPCLRGRQLTASRRPRICR*EKVCTG
Trigger: TCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGG...CCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR TCA 72 bp CCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTaGCCGCTGCGGAGTGCGTGGGGAGCAGTGGCGCAT +
Preference number: 3 (lower is better)
Translates to: PCLHHLLGMDPL*PLRSAWGAVAH
Trigger: ATGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR GCA 72 bp CCGTGCCCGATGTGGTGTCTTGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCAAGGCCAGGGACCACA +
Preference number: 3 (lower is better)
Translates to: PCPMWCLVAQGL*QGSCGPRPGTT
Trigger: TGTGGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR GCA 72 bp AGAGCCCAGACCTCTCCCCACGCTACCTCAAGGCCGTaGCCGATGTGGTGTCTTGTGGCTCAAGGGCTGTGC +
Preference number: 3 (lower is better)
Translates to: RAQTSPHATSRP*PMWCLVAQGLC
Trigger: GCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGTAGCGTGGGGAGAGGTCTGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR CCA 72 bp CACTTGAGTCATCGCTCAGGAGGTCCTTCTGGGATCTaGGCAGGTGACTGCCCCAGGTGGCAGGACGTCCCC +
Preference number: 3 (lower is better)
Translates to: HLSHRSGGPSGI*AGDCPRWQDVP
Trigger: GGGGACGTCCTGCCACCTGGGGCAGTCACCTGCCCAGATCCCAGAAGGACCTCCTGAGCGATGACTCAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 72 bp TCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTGCACTaGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCC +
Preference number: 3 (lower is better)
Translates to: SPVCSVKAEWVH*GGRVSPEHPAS
Trigger: GGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp AGGAGAACCCTGAAGTGGGCCCTCCCAGTCCCATCTCTGGGCACAGATCCCACCCTGGCCAGGGCTACCTaGTCTGTGGGGCCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: RRTLKWALPVPSLGTDPTLARAT*SVGPSL
Trigger: AAGGGAAGGCCCCACAGACAAGGTAGCCCTGGCCAG...GGTGGGATCTGTGCCCAGAGATGGGACTGGGAGGGCCCACTTCAGGGTTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp GGCTCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAGACAGAGGCTGCTGCTaGCTCAGAGGCCCCAGAGCA +
Preference number: 3 (lower is better)
Translates to: GSLPVKLGKAPCLRGRQLDRGCC*LRGPRA
Trigger: TGCTCTGGGGCCTCTGAGCAAGCAGCAGCCTCTGTC...TAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR-3UTR CAA 90 bp CCCAGGTCCACCACCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGAGCTCCCACTGTGGTaGGAGTGGCGTGGCGGATAC +
Preference number: 3 (lower is better)
Translates to: PRSTTTRLCNLGKSPTSQELPLW*EWRGGY
Trigger: GTATCCGCCACGCCACTCCAACCACAGTGGGAGCTC...CTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGGTGGTGGACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CAA 90 bp CCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATGACAGAGGCTGCTGCTaGCTCAGAGGCCCCAGAGCA +
Preference number: 3 (lower is better)
Translates to: PCLRGRQLTASRRRSIYNDRGCC*LRGPRA
Trigger: TGCTCTGGGGCCTCTGAGCAAGCAGCAGCCTCTGTC...ATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR TCA 72 bp CGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTaGCCCGCTTCAGCATCCGCATGTTCAGCTTGTTGG +
Preference number: 3 (lower is better)
Translates to: RRQPRYVWAATC*PASASACSACW
Trigger: CCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
3UTR CCA 72 bp GGTCCTTCTGGGATCTGGGCAGGTGACTGCCCCAGGTaGCAGGACGTCCCCACCCATCTTAGACTGATCAGG +
Preference number: 3 (lower is better)
Translates to: GPSGIWAGDCPR*QDVPTHLRLIR
Trigger: CCTGATCAGTCTAAGATGGGTGGGGACGTCCTGCCACCTGGGGCAGTCACCTGCCCAGATCCCAGAAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 72 bp GGCCTTGAGAATCCCTGGGGCCAGCCAGAGCCTGACTaGGCCCAAATCCCTCCTTACCTCTCCATCCCGCAT +
Preference number: 3 (lower is better)
Translates to: GLENPWGQPEPD*AQIPPYLSIPH
Trigger: ATGCGGGATGGAGAGGTAAGGAGGGATTTGGGCCCAGTCAGGCTCTGGCTGGCCCCAGGGATTCTCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR CCA 72 bp AGCTCCACATGGACCTGCTGTCGGGCCAGCTGCTCCTaGAGTTCCCGAACCTCCTCCTCGTGGATCTTCCTC +
Preference number: 3 (lower is better)
Translates to: SSTWTCCRASCS*SSRTSSSWIFL
Trigger: GAGGAAGATCCACGAGGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCAGGTCCATGTGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR CCA 72 bp ACCTCTCCCCACGCTACCTCAAGGCCGTGCCCGATGTaGTGTCTTGTGGCTCAAGGGCTGTGCCAAGGAAGC +
Preference number: 3 (lower is better)
Translates to: TSPHATSRPCPM*CLVAQGLCQGS
Trigger: GCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGTAGCGTGGGGAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR CCA 72 bp TATGGGCACCTCCATGTCTTCACCACCTTCTGGGAATaGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: YGHLHVFTTFWE*TPCDRCGVRGE
Trigger: CTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR-3UTR CAA 90 bp ACCTGCCCACAGCGTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACCTAGCGCCATCCCAATaGCCTCCTCCTCCATCTCTA +
Preference number: 3 (lower is better)
Translates to: TCPQRAHRWHPWMAAQVDLAPSQ*PPPPSL
Trigger: TAGAGATGGAGGAGGAGGCAATTGGGATGGCGCTAG...GTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCACGCTGTGGGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp GACTCGTTCGTGCCGCGCAGAGACTCCAGGTCGCAGGTCAAGGACTGCAACTGGTGTTGCTGGACGCCATaGCCTCATACTGCGTGCGGA +
Preference number: 3 (lower is better)
Translates to: DSFVPRRDSRSQVKDCNWCCWTP*PHTACG
Trigger: TCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACA...CCAGTTGCAGTCCTTGACCTGCGACCTGGAGTCTCTGCGCGGCACGAACGAGTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR TCA 72 bp CGGCAACCAGCTCCACATCCGCTTCACCCAGCTGGATaGCCGGGGCATCTACTATTGCTGGAGGCAGGGTGT +
Preference number: 3 (lower is better)
Translates to: RQPAPHPLHPAG*PGHLLLLEAGC
Trigger: ACACCCTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR TCA 72 bp AAGGAAGCTGCGGACCAAGGCCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTGCTTAGTACCCTGAAG +
Preference number: 3 (lower is better)
Translates to: KEAADQGQGPHA*GAGSELLSTLK
Trigger: CTTCAGGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCGCAGCTTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639369.1
ENST00000640859.1
3UTR TCA 72 bp GGACTCCAGTGCCCTTCCCACGAGGCCCTGCTGTACTaGCCTCGAATCTGCAGGTTGGAGAAGGTCTGCACG +
Preference number: 3 (lower is better)
Translates to: GLQCPSHEALLY*PRICRLEKVCT
Trigger: CGTGCAGACCTTCTCCAACCTGCAGATTCGAGGTCAGTACAGCAGGGCCTCGTGGGAAGGGCACTGGAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR GCA 72 bp CGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTaGTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGG +
Preference number: 3 (lower is better)
Translates to: RFTQLDDRGIYY*WRQGVLVAGFR
Trigger: CCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR CCA 72 bp CCTGCCCACAGCGTGCCCACAGATGGCATCCCTGGATaGCAGCTCAGGTGGACTGAGACACTTGAGTCATCG +
Preference number: 3 (lower is better)
Translates to: PAHSVPTDGIPG*QLRWTETLESS
Trigger: CGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCACGCTGTGGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 72 bp CCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTaGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCAC +
Preference number: 3 (lower is better)
Translates to: PVCSPVCSVKAE*VHWGGRVSPEH
Trigger: GTGCTCAGGGCTGACACGTCCACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 72 bp TGGAGCCTCAGGGATGAAAGAATAAAGCAGAGAGCCTaGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCC +
Preference number: 3 (lower is better)
Translates to: WSLRDERIKQRA*RPGTARPKGPS
Trigger: GGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTATTCTTTCATCCCTGAGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR CCA 72 bp ACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTaGATGACCGGGGCATCTACTATTGCTGGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: TTATSSTSASPS*MTGASTIAGGR
Trigger: CCTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR CCA 72 bp ACGCTACCTCAAGGCCGTGCCCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAA +
Preference number: 3 (lower is better)
Translates to: TLPQGRARCGVL*LKGCAKEAADQ
Trigger: TTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGTAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR-3UTR CAA 90 bp AGGAGAACCCTGAAGTGGGCCCTCCCAGTCCCATCTCTGGGCACAGATCCCACCCCTCCAGACTGCCCCTaGGGGGTGAGTTTCTTGTTA +
Preference number: 3 (lower is better)
Translates to: RRTLKWALPVPSLGTDPTPPDCP*GVSFLL
Trigger: TAACAAGAAACTCACCCCCAAGGGGCAGTCTGGAGG...GGTGGGATCTGTGCCCAGAGATGGGACTGGGAGGGCCCACTTCAGGGTTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp CTCTATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGCTGGCCAGGGCTACCTaGTCTGTGGGGCCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: LYPSQHLIPLHVHNRSPKLARAT*SVGPSL
Trigger: AAGGGAAGGCCCCACAGACAAGGTAGCCCTGGCCAG...CTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGATAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp CCACCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTGCACTGGGGTCGAGGCTGTGTAACCTaGGGAAGTCCCCGACTTCCC +
Preference number: 3 (lower is better)
Translates to: PPVCSPVCSVKAEWVHWGRGCVT*GSPRLP
Trigger: GGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCG...ACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CAA 90 bp GGTGGCTTCATCTGCTTCCTGTCTATAGGCAGCCAGGTTGTTCTCGGCTTCCAGGCTGTTGGCGGTGAGTaGATCGAGCCGCAGCCGCAG +
Preference number: 3 (lower is better)
Translates to: GGFICFLSIGSQVVLGFQAVGGE*IEPQPQ
Trigger: CTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGC...CTGGAAGCCGAGAACAACCTGGCTGCCTATAGACAGGAAGCAGATGAAGCCACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR-3UTR CAA 90 bp AGCCTCAGGGATGAAAGAATAAAGCAGAGAGCCTGGCGTCCAGGCACAGCGAGACCCCTAGGCTGGGTCTaGGTGCGGGGCCATCATGAC +
Preference number: 3 (lower is better)
Translates to: SLRDERIKQRAWRPGTARPLGWV*VRGHHD
Trigger: GTCATGATGGCCCCGCACCAAGACCCAGCCTAGGGG...TCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTATTCTTTCATCCCTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR TCA 72 bp CCTCATACTGCGTGCGGATCTCTTTCAGGGCTGCGGTaGGGTCTGGCTTGGCCACGTCAAGCTCCACATGGA +
Preference number: 3 (lower is better)
Translates to: PHTACGSLSGLR*GLAWPRQAPHG
Trigger: TCCATGTGGAGCTTGACGTGGCCAAGCCAGACCTCACCGCAGCCCTGAAAGAGATCCGCACGCAGTATGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376990.8
ENST00000585728.5
3UTR TCA 72 bp CAAAGGCTACATCTTGGCCCCAGTCCCGCCCTCTCATaGACAGATCAGAGTCCACTCTGGGGAAGGGCGCAG +
Preference number: 3 (lower is better)
Translates to: QRLHLGPSPALS*TDQSPLWGRAQ
Trigger: CTGCGCCCTTCCCCAGAGTGGACTCTGATCTGTTCATGAGAGGGCGGGACTGGGGCCAAGATGTAGCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR GCA 72 bp ACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTaGCCACAGCGTGCCCACAGATGGCATCCCTGGATG +
Preference number: 3 (lower is better)
Translates to: TDPPSAENQAPT*PQRAHRWHPWM
Trigger: CATCCAGGGATGCCATCTGTGGGCACGCTGTGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR GCA 72 bp GTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTaGAGGAATATGAGCCAGTGTCTTCACTTTGCTCGT +
Preference number: 3 (lower is better)
Translates to: VDVSALSTRPPG*RNMSQCLHFAR
Trigger: ACGAGCAAAGTGAAGACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR GCA 72 bp GCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTaGTTAGTACCCTGTGAGAAGACAAAGACCATCCGG +
Preference number: 3 (lower is better)
Translates to: ARDHTPEVLVRS*LVPCEKTKTIR
Trigger: CCGGATGGTCTTTGTCTTCTCACAGGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR CCA 72 bp CCCCTTGGGGGTGAGTTTCTTGTTAGTTGGAGTTGCTaGGTGCTGGGTGGGTGCCGTCTGGCAGGCCTGATA +
Preference number: 3 (lower is better)
Translates to: PLGGEFLVSWSC*VLGGCRLAGLI
Trigger: TATCAGGCCTGCCAGACGGCACCCACCCAGCACCCAGCAACTCCAACTAACAAGAAACTCACCCCCAAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 72 bp TCCAGACTGCCCCTTGGGGGTGAGTTTCTTGTTAGTTaGAGTTGCTGGGTGCTGGGTGGGTGCCGTCTGGCA +
Preference number: 3 (lower is better)
Translates to: SRLPLGGEFLVS*SCWVLGGCRLA
Trigger: TGCCAGACGGCACCCACCCAGCACCCAGCAACTCCAACTAACAAGAAACTCACCCCCAAGGGGCAGTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 72 bp GTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTaGACTGAGACACTTGAGTCATCGCTCAGGAGGTCC +
Preference number: 3 (lower is better)
Translates to: VPTDGIPGWQLR*TETLESSLRRS
Trigger: GGACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 72 bp CCTTGGCTTAGGGAAAAGCAGCCGGTCACTATGGGGTaGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGG +
Preference number: 3 (lower is better)
Translates to: PWLREKQPVTMG*RGSDVWQWLTG
Trigger: CCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGTGACCGGCTGCTTTTCCCTAAGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CCA 72 bp TTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTaGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTG +
Preference number: 3 (lower is better)
Translates to: FTQLDDRGIYYC*RQGVLVAGFRL
Trigger: CAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR CCA 72 bp TCAGGTATGCACCTGGCCCTCACCACTGTGCTCCTGTaGGCATGGGGGCTCCAGGCCTTTGAAATTGTGGAG +
Preference number: 3 (lower is better)
Translates to: SGMHLALTTVLL*AWGLQAFEIVE
Trigger: CTCCACAATTTCAAAGGCCTGGAGCCCCCATGCCCACAGGAGCACAGTGGTGAGGGCCAGGTGCATACCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
3UTR CCA 72 bp CAGTGTTCTCAAGGCCGTGCCCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAA +
Preference number: 3 (lower is better)
Translates to: QCSQGRARCGVL*LKGCAKEAADQ
Trigger: TTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGAACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
3UTR CCA 72 bp AAGCCCCACCTAGAAGTACCCTGGTATGATAGGCTCTaGCTAGGAGCGCTGCAGTGTCACGAAGGCCCCCAG +
Preference number: 3 (lower is better)
Translates to: KPHLEVPWYDRL*LGALQCHEGPQ
Trigger: CTGGGGGCCTTCGTGACACTGCAGCGCTCCTAGCCAGAGCCTATCATACCAGGGTACTTCTAGGTGGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR CCA 72 bp GACAGGGGCAGCTGCAAGCCCCACCTAGAAGTACCCTaGTATGATAGGCTCTGGCTAGGAGCGCTGCAGTGT +
Preference number: 3 (lower is better)
Translates to: DRGSCKPHLEVP*YDRLWLGALQC
Trigger: ACACTGCAGCGCTCCTAGCCAGAGCCTATCATACCAGGGTACTTCTAGGTGGGGCTTGCAGCTGCCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR CCA 72 bp TTTACGCCTCAAGGCCGTGCCCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAA +
Preference number: 3 (lower is better)
Translates to: FTPQGRARCGVL*LKGCAKEAADQ
Trigger: TTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGCGTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640859.1
3UTR CCA 72 bp GGGGACTACTTTTACGCCTCAAGGCCGTGCCCGATGTaGTGTCTTGTGGCTCAAGGGCTGTGCCAAGGAAGC +
Preference number: 3 (lower is better)
Translates to: GDYFYASRPCPM*CLVAQGLCQGS
Trigger: GCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGCGTAAAAGTAGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640859.1
3UTR-3UTR CAA 90 bp TCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGAATATGAGCCAGTGTCTTCACGGTGGACTGAGACACTaGAGTCATCGCTCAGGAGGT +
Preference number: 3 (lower is better)
Translates to: SALSTRPPGCRNMSQCLHGGLRH*SHRSGG
Trigger: ACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACC...GTGAAGACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp AGACACTTGAGTCATCGCTCAGGAGGTCCTTCTGGGATCTGGGCAGGTGACTGCGCAGTCCTCCTGGGCTaGACCTCTCTGTACCCACAG +
Preference number: 3 (lower is better)
Translates to: RHLSHRSGGPSGIWAGDCAVLLG*TSLYPQ
Trigger: CTGTGGGTACAGAGAGGTCAAGCCCAGGAGGACTGC...GCAGTCACCTGCCCAGATCCCAGAAGGACCTCCTGAGCGATGACTCAAGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp AATCTTCCTCTCCAGATCCAGACGGGCCAGGGTGGCTTCATCTGCTTCCTGTCTGCGGTGAGGTCTGGCTaGGCCACGTCAAGCTCCACA +
Preference number: 3 (lower is better)
Translates to: NLPLQIQTGQGGFICFLSAVRSG*ATSSST
Trigger: TGTGGAGCTTGACGTGGCCAAGCCAGACCTCACCGC...AGACAGGAAGCAGATGAAGCCACCCTGGCCCGTCTGGATCTGGAGAGGAAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR-3UTR CAA 90 bp CTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCAACAGTAACCACAGCTGCCTaGCGTGGTGGACAGAGGGGG +
Preference number: 3 (lower is better)
Translates to: LLGLLNDLQGTGNVHSATVTTAA*RGGQRG
Trigger: CCCCCTCTGTCCACCACGCAAGGCAGCTGTGGTTAC...TGTTGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CAA 90 bp ACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGAAGGCAGTCCTCCTGGGCTaGACCTCTCTGTACCCACAG +
Preference number: 3 (lower is better)
Translates to: TMGWRGSDVWQWLTGVKKAVLLG*TSLYPQ
Trigger: CTGTGGGTACAGAGAGGTCAAGCCCAGGAGGACTGC...CTTCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp GTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGACTCCTTAATGACGTAACCACAGCTGCCTaGCGTGGTGGACAGAGGGGG +
Preference number: 3 (lower is better)
Translates to: VGPASHHILVLLLGLLNDVTTAA*RGGQRG
Trigger: CCCCCTCTGTCCACCACGCAAGGCAGCTGTGGTTAC...GTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CAA 90 bp AGGGGCTCAGAGGCTGGGGCGGCCTGGTATGACACAGCAAGGAAGAGGCCTTTATCCTTGTGCTCCTGCTaGGACTCCTTAATGACCTGC +
Preference number: 3 (lower is better)
Translates to: RGSEAGAAWYDTARKRPLSLCSC*DSLMTC
Trigger: GCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGA...TAAAGGCCTCTTCCTTGCTGTGTCATACCAGGCCGCCCCAGCCTCTGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CAA 90 bp TGTGGTTGGAGTGGCGTGGCGGATACGCCAAATCCCCTCTTCCCATTCCCCTGGCCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTTC +
Preference number: 3 (lower is better)
Translates to: CGWSGVADTPNPLFPFPWPSDTD*VSRLVF
Trigger: GAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGG...CCAGGGGAATGGGAAGAGGGGATTTGGCGTATCCGCCACGCCACTCCAACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CAA 90 bp GCAGCCAGGTTGTTCTCGGCTTCCAGCCTCAGGTTGGTTTCATCCTGGAGCTTCAGGTCCTGTGCCAGATaGTCCCTCTCAACCTCCAGC +
Preference number: 3 (lower is better)
Translates to: AARLFSASSLRLVSSWSFRSCAR*SLSTSS
Trigger: GCTGGAGGTTGAGAGGGACAATCTGGCACAGGACCT...GAAGCTCCAGGATGAAACCAACCTGAGGCTGGAAGCCGAGAACAACCTGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR-3UTR CAA 90 bp CTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTAGGGGAAGCTCAGAAGGGCAGTGCTaGCTCAGGGATCTGCAGACA +
Preference number: 3 (lower is better)
Translates to: LGTAVPGKMTQSRPFRGSSEGQC*LRDLQT
Trigger: TGTCTGCAGATCCCTGAGCAAGCACTGCCCTTCTGA...GCTTCCCCTAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR TCA 72 bp CCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAGACTTGGTGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: PASPRSSPRCSS*GGLLTQTWCPG
Trigger: GCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR TCA 72 bp TTGGGTGAGCGCCAGTGTTCTGGCCGACATGAGCTTTaGGCTTCCCTGTCACTGCAAACCCGAAGAGGTGCC +
Preference number: 3 (lower is better)
Translates to: LGERQCSGRHEL*ASLSLQTRRGA
Trigger: GGCACCTCTTCGGGTTTGCAGTGACAGGGAAGCTCAAAGCTCATGTCGGCCAGAACACTGGCGCTCACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639243.1
ENST00000640859.1
3UTR GCA 72 bp TCCCAGTCCCATCTCTGGGCACAGATCCCACCAGTCTaGTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTG +
Preference number: 3 (lower is better)
Translates to: SQSHLWAQIPPV*SPVCSVKAEWV
Trigger: CACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGGGATCTGTGCCCAGAGATGGGACTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR GCA 72 bp GCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTaGTCCTGCTTGGACTCCTTAATGACCTGCAGGGGA +
Preference number: 3 (lower is better)
Translates to: ATRWVLPHITSL*SCLDSLMTCRG
Trigger: TCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR GCA 72 bp CTCTCCTCCAGAATTCCCTGGGGAGCTACTGGGAGTTaGTGGGAACCTTCTATGTGCCAGCCCCAGGCTTTC +
Preference number: 3 (lower is better)
Translates to: LSSRIPWGATGS*WEPSMCQPQAF
Trigger: GAAAGCCTGGGGCTGGCACATAGAAGGTTCCCAGCAACTCCCAGTAGCTCCCCAGGGAATTCTGGAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR GCA 72 bp TTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTaGGGCACCCGCAAGGGGGACTACTTTTACGCCTAC +
Preference number: 3 (lower is better)
Translates to: FRAQSEDSGLYF*GTRKGDYFYAY
Trigger: GTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR GCA 72 bp TTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTaGGGCACCCGCAAGGGGGACTACTTTTACGCCTCA +
Preference number: 3 (lower is better)
Translates to: FRAQSEDSGLYF*GTRKGDYFYAS
Trigger: TGAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640859.1
3UTR CCA 72 bp AGGCAGCCAGGTTGTTCTCGGCTTCCAGCCTCAGGTTaGTTTCATCCTGGAGCTTCTGCCTCACAGTGGCCA +
Preference number: 3 (lower is better)
Translates to: RQPGCSRLPASG*FHPGASASQWP
Trigger: TGGCCACTGTGAGGCAGAAGCTCCAGGATGAAACCAACCTGAGGCTGGAAGCCGAGAACAACCTGGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR CCA 72 bp TGGAGGGAGCTGGTGTATGTCCTCTTTGGCTGCGGGTaGAATTTGGTGAGGGCATGGGCCCCAGAGATGATC +
Preference number: 3 (lower is better)
Translates to: WRELVYVLFGCG*NLVRAWAPEMI
Trigger: GATCATCTCTGGGGCCCATGCCCTCACCAAATTCCACCCGCAGCCAAAGAGGACATACACCAGCTCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR CCA 72 bp GAATACTATGGGCACCTCCATGTCTTCACCACCTTCTaGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGT +
Preference number: 3 (lower is better)
Translates to: EYYGHLHVFTTF*EWTPCDRCGVR
Trigger: ACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATAGTATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR-3UTR CAA 90 bp CTATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGTGCCTCCAGACTGCCCCTaGGGGGTGAGTTTCTTGTTA +
Preference number: 3 (lower is better)
Translates to: LSLPAPHPSPRTQQIPQVPPDCP*GVSFLL
Trigger: TAACAAGAAACTCACCCCCAAGGGGCAGTCTGGAGG...CACTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp GAGGCCAAGTGCAACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCAGGTGGGTAGACTGCTaGAGCCCAGGAGTTCAAGGT +
Preference number: 3 (lower is better)
Translates to: EAKCNWSPTTPTCMPSAIRWVDC*SPGVQG
Trigger: ACCTTGAACTCCTGGGCTCAAGCAGTCTACCCACCT...GATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTTGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp AACCCTGAAGTGGGCCCTCCCAGTCCCATCTCTGGGCACAGATCCCACCAGTCTGCCAGTGTCTTCACTTaGCTCGTGCCTCAGTTTTAC +
Preference number: 3 (lower is better)
Translates to: NPEVGPPSPISGHRSHQSASVFT*LVPQFY
Trigger: GTAAAACTGAGGCACGAGCAAAGTGAAGACACTGGC...AGACTGGTGGGATCTGTGCCCAGAGATGGGACTGGGAGGGCCCACTTCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp GCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGTCATCACAGCAGTCTTaGTCACCATTCACTTCTGTC +
Preference number: 3 (lower is better)
Translates to: AISSGPASLPDGQICRRVSSQQS*SPFTSV
Trigger: GACAGAAGTGAATGGTGACAAAGACTGCTGTGATGA...CACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR-3UTR CAA 90 bp AGGGCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCGGCCATCATGACAACTaGAACGCCCTTTTCCTTGCC +
Preference number: 3 (lower is better)
Translates to: RAVLAQGSADRADVKLSPGHHDN*NALFLA
Trigger: GGCAAGGAAAAGGGCGTTCAAGTTGTCATGATGGCC...GGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR TCA 72 bp CCTGAAGGGTGTCAACAGGTCCATGAGGGTGTTCATTaGCCACGGCAACCAGCTCCACATCCGCTTCACCCA +
Preference number: 3 (lower is better)
Translates to: PEGCQQVHEGVH*PRQPAPHPLHP
Trigger: TGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACACCCTCATGGACCTGTTGACACCCTTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR TCA 72 bp CCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTaGGGACTCAGGCCTGTACTTCTGCGGCACCCGCAA +
Preference number: 3 (lower is better)
Translates to: PHVQLVGFQGSV*GLRPVLLRHPQ
Trigger: TTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
3UTR GCA 72 bp GCTTCATGCATGTTGCTGGACGCCATTGCCTCATACTaGGTGCGGATCTCTTTCAGGGCTGCGGTGAGGTCT +
Preference number: 3 (lower is better)
Translates to: ASCMLLDAIASY*VRISFRAAVRS
Trigger: AGACCTCACCGCAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR GCA 72 bp CCACTCTTCGGCTTCATGCATGTTGCTGGACGCCATTaGCTCATACTGCGTGCGGATCTCTTTCAGGGCTGC +
Preference number: 3 (lower is better)
Translates to: PLFGFMHVAGRH*LILRADLFQGC
Trigger: GCAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR GCA 72 bp CCAGCAGCCAACGTGCTATCTGGAGTTCCAAACGTCTaGAAGGGGCTTGAGTGTTATCTGGGAGGGGCGCAT +
Preference number: 3 (lower is better)
Translates to: PAANVLSGVPNV*KGLECYLGGAH
Trigger: ATGCGCCCCTCCCAGATAACACTCAAGCCCCTTGCAGACGTTTGGAACTCCAGATAGCACGTTGGCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR CCA 72 bp GTAAGCTGCTGGAGTAAGATGAGCTCCCACTGTGGTTaGAGTGGCGTGGCGGATACGCCAAATCCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: VSCWSKMSSHCG*SGVADTPNPLF
Trigger: GAAGAGGGGATTTGGCGTATCCGCCACGCCACTCCAACCACAGTGGGAGCTCATCTTACTCCAGCAGCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR CCA 72 bp AAGAAAAGAGTGGAGGGAGCTGGTGTATGTCCTCTTTaGCTGCGGGTGGAATTTGGTGAGGGCATGGGCCCC +
Preference number: 3 (lower is better)
Translates to: KKRVEGAGVCPL*LRVEFGEGMGP
Trigger: GGGGCCCATGCCCTCACCAAATTCCACCCGCAGCCAAAGAGGACATACACCAGCTCCCTCCACTCTTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR CCA 72 bp CCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTaGCCACTTTCCAGGACAAGGGCCAGGAGCCCTTTG +
Preference number: 3 (lower is better)
Translates to: PTMWTSRTVREW*PLSRTRARSPL
Trigger: CAAAGGGCTCCTGGCCCTTGTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR-3UTR CAA 90 bp TGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCAACAGGGTGGACTGAGACACTaGAGTCATCGCTCAGGAGGT +
Preference number: 3 (lower is better)
Translates to: CLDSLMTCRGQGTCTVQQGGLRH*SHRSGG
Trigger: ACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACC...CTGTTGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CAA 90 bp CACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACCCTGTGAGAAGACAAAGGGTGGACTGAGACACTaGAGTCATCGCTCAGGAGGT +
Preference number: 3 (lower is better)
Translates to: HTPEVLVRSCLVPCEKTKGGLRH*SHRSGG
Trigger: ACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACC...CTTTGTCTTCTCACAGGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR-3UTR CAA 90 bp CCACCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTGCACTGGGGTGCCAGTGTCTTCACTTaGCTCGTGCCTCAGTTTTAC +
Preference number: 3 (lower is better)
Translates to: PPVCSPVCSVKAEWVHWGASVFT*LVPQFY
Trigger: GTAAAACTGAGGCACGAGCAAAGTGAAGACACTGGC...ACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp CGTCATGCCTGGCGAGTGGTAAGCTGCTGGAGTAAGATGAGCTCCCACTGTGGTACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACA +
Preference number: 3 (lower is better)
Translates to: RHAWRVVSCWSKMSSHCGTTMFL*RWPSDT
Trigger: TGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGT...ACCACAGTGGGAGCTCATCTTACTCCAGCAGCTTACCACTCGCCAGGCATGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CAA 90 bp AATCTTCCTCTCCAGATCCAGACGGGCCAGGGTGGCTTCATCTGCTTCCTGTCTGCTTCCAGCCTCAGGTaGGTTTCATCCTGGAGCTTC +
Preference number: 3 (lower is better)
Translates to: NLPLQIQTGQGGFICFLSASSLR*VSSWSF
Trigger: GAAGCTCCAGGATGAAACCAACCTGAGGCTGGAAGC...AGACAGGAAGCAGATGAAGCCACCCTGGCCCGTCTGGATCTGGAGAGGAAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR-3UTR CAA 90 bp GAGCAGCTCCACTGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTTCAGAAGGGCAGTGCTaGCTCAGGGATCTGCAGACA +
Preference number: 3 (lower is better)
Translates to: EQLHCAPKDSPPLPLTSSSEGQC*LRDLQT
Trigger: TGTCTGCAGATCCCTGAGCAAGCACTGCCCTTCTGA...AGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCAGTGGAGCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR TCA 72 bp ATTTTTCCTCAGCGACTAAAGGCAGCAGCAGTGCCCTaGAGATTAGCAGCAGCAGCAGCAGCAGGTGGCAGG +
Preference number: 3 (lower is better)
Translates to: IFPQRLKAAAVP*RLAAAAAAGGR
Trigger: CCTGCCACCTGCTGCTGCTGCTGCTGCTAATCTTCAGGGCACTGCTGCTGCCTTTAGTCGCTGAGGAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253408.10
ENST00000588735.3
3UTR TCA 72 bp ACCACAGCTGCCTTGCGTGGTGGACAGAGGGGGTGGTaGGATAACACTGGGAAAGCATTTAGCGTCATGCCT +
Preference number: 3 (lower is better)
Translates to: TTAALRGGQRGW*DNTGKAFSVMP
Trigger: AGGCATGACGCTAAATGCTTTCCCAGTGTTATCTCACCACCCCCTCTGTCCACCACGCAAGGCAGCTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR GCA 72 bp CCAAGTGCAACTGGTCACCCACAACCCCTACTTGTATaGCTAGCGCCATCCCAATTGCCTCCTCCTCCATCT +
Preference number: 3 (lower is better)
Translates to: PSATGHPQPLLV*LAPSQLPPPPS
Trigger: AGATGGAGGAGGAGGCAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR GCA 72 bp ACTTGGAGCGGTACCACTCTTCGGCTTCATGCATGTTaGTGGACGCCATTGCCTCATACTGCGTGCGGATCT +
Preference number: 3 (lower is better)
Translates to: TWSGTTLRLHAC*WTPLPHTACGS
Trigger: AGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTGGTACCGCTCCAAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR GCA 72 bp TACCTGGCCGACATGAGCTTTGAGCTTCCCTGTCACTaGAAACCCGAAGAGGTGCCAGCTGTAGTCTGGTTC +
Preference number: 3 (lower is better)
Translates to: YLADMSFELPCH*KPEEVPAVVWF
Trigger: GAACCAGACTACAGCTGGCACCTCTTCGGGTTTGCAGTGACAGGGAAGCTCAAAGCTCATGTCGGCCAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
3UTR GCA 72 bp GTTCTGGCCGACATGAGCTTTGAGCTTCCCTGTCACTaGAAACCCGAAGAGGTGCCAGCTGTAGTCTGGTTC +
Preference number: 3 (lower is better)
Translates to: VLADMSFELPCH*KPEEVPAVVWF
Trigger: GAACCAGACTACAGCTGGCACCTCTTCGGGTTTGCAGTGACAGGGAAGCTCAAAGCTCATGTCGGCCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639243.1
ENST00000640859.1
3UTR CCA 72 bp TGGAGCGGTACCACTCTTCGGCTTCATGCATGTTGCTaGACGCCATTGCCTCATACTGCGTGCGGATCTCTT +
Preference number: 3 (lower is better)
Translates to: WSGTTLRLHACC*TPLPHTACGSL
Trigger: AAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTGGTACCGCTCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR CCA 72 bp ACTCAATCTTCCTCTCCAGATCCAGACGGGCCAGGGTaGCTTCATCTGCTTCCTGTCTATAGGCAGCCAGGT +
Preference number: 3 (lower is better)
Translates to: TQSSSPDPDGPG*LHLLPVYRQPG
Trigger: ACCTGGCTGCCTATAGACAGGAAGCAGATGAAGCCACCCTGGCCCGTCTGGATCTGGAGAGGAAGATTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
3UTR CCA 72 bp CCTGTGAGAAGACAAAGACCATCCGGGAGGGCGTGCTaGCCATCATTAACTATGTGTCCAAAGTGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: PVRRQRPSGRAC*PSLTMCPKWAA
Trigger: GGCTGCCCACTTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTTCTCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR CCA 72 bp GCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTaGACATCCAGAACAGTGAGGGAATGGTGGCCACTT +
Preference number: 3 (lower is better)
Translates to: APARGTTFTPTM*TSRTVREWWPL
Trigger: AAGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR TCA 72 bp GGTCTTCACCACGATGTTCCTCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAGGCTGGTTTTCCCTGT +
Preference number: 3 (lower is better)
Translates to: GLHHDVPLEVAF*HRLGVQAGFPC
Trigger: ACAGGGAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR GCA 72 bp TCTGCAAACTTGGAGCGGTACCACTCTTCGGCTTCATaGATGTTGCTGGACGCCATTGCCTCATACTGCGTG +
Preference number: 3 (lower is better)
Translates to: SANLERYHSSAS*MLLDAIASYCV
Trigger: CACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTGGTACCGCTCCAAGTTTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR CCA 72 bp ATCTCCACGGTCTTCACCACGATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTT +
Preference number: 3 (lower is better)
Translates to: ISTVFTTMFLLR*PSDTDLVSRLV
Trigger: AACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR CCA 72 bp GTGGACAAATCTGTTACAGCCTGCTCCCCATTTTCATaGGCAGGTCTGGGACCTGATCTGAGAAGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: VDKSVTACSPFS*AGLGPDLRSGG
Trigger: CCCTCCACTTCTCAGATCAGGTCCCAGACCTGCCCATGAAAATGGGGAGCAGGCTGTAACAGATTTGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
3UTR CCA 72 bp TGTCACTGCAAACCCGAAGAGGTGCCAGCTGTAGTCTaGTTCTACCAAAAGCACCTAGGTAGCAGCCACACC +
Preference number: 3 (lower is better)
Translates to: CHCKPEEVPAVV*FYQKHLGSSHT
Trigger: GGTGTGGCTGCTACCTAGGTGCTTTTGGTAGAACCAGACTACAGCTGGCACCTCTTCGGGTTTGCAGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
3UTR-3UTR CAA 90 bp AGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGACTTTACATTCAGTTTCCTaGCTCTCCTCCAGAATTCCC +
Preference number: 3 (lower is better)
Translates to: RPPGGSCLTSHPCAPAWTLHSVS*LSSRIP
Trigger: GGGAATTCTGGAGGAGAGCAAGGAAACTGAATGTAA...AGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR TCA 72 bp CTACTTTTACGCCTACGATGTGGACATCCAGAACAGTaGGGGAATGGTGGCCACTTTCCAGGACAAGGGCCA +
Preference number: 3 (lower is better)
Translates to: LLLRLRCGHPEQ*GNGGHFPGQGP
Trigger: TGGCCCTTGTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
3UTR GCA 72 bp ACATCCTTGTGCTCCTGCTTGGACTCCTTAATGACCTaGAGGGGACAGGGAACGTGCACAGTGCAACAGTTA +
Preference number: 3 (lower is better)
Translates to: TSLCSCLDSLMT*RGQGTCTVQQL
Trigger: TAACTGTTGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR GCA 72 bp TACCCTGTGAGAAGACAAAGACCATCCGGGAGGGCGTaGTGGCCATCATTAACTATGTGTCCAAAGTGGGCA +
Preference number: 3 (lower is better)
Translates to: YPVRRQRPSGRA*WPSLTMCPKWA
Trigger: TGCCCACTTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTTCTCACAGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
3UTR GCA 72 bp GAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTaGAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGC +
Preference number: 3 (lower is better)
Translates to: EVLNFPLETQFL*RLGLGKSQAIS
Trigger: GCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
3UTR CCA 72 bp TTCCTTAATTCCCACAATCCAGAGGCCAAGTGCAACTaGTCACCCACAACCCCTACTTGTATGCCTAGCGCC +
Preference number: 3 (lower is better)
Translates to: FLNSHNPEAKCN*SPTTPTCMPSA
Trigger: GGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTTGGCCTCTGGATTGTGGGAATTAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp CGTCATGCCTGGCGAGTGGTAAGCTGCTGGAGTAAGATGAGCTCCCACTGTGGTCAGGTCTTACTTTTCTaGATAGTAACCACAGCTGCC +
Preference number: 3 (lower is better)
Translates to: RHAWRVVSCWSKMSSHCGQVLLF*IVTTAA
Trigger: GGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTG...ACCACAGTGGGAGCTCATCTTACTCCAGCAGCTTACCACTCGCCAGGCATGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR-3UTR CAA 90 bp CCACCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTGCACTGGGGTAATACTGGGTACATTTaGTGTGTGAGTAAGAAGGGA +
Preference number: 3 (lower is better)
Translates to: PPVCSPVCSVKAEWVHWGNTGYI*CVSKKG
Trigger: TCCCTTCTTACTCACACACAAAATGTACCCAGTATT...ACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR-3UTR CAA 90 bp TCCACGTACACAACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTGCCCACAGGTCTTACTTTTCTaGATAGTAACCACAGCTGCC +
Preference number: 3 (lower is better)
Translates to: STYTTDPPSAENQAPTCPQVLLF*IVTTAA
Trigger: GGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTG...TGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGTTGTGTACGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR-3UTR CAA 90 bp ACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTTGGTGTATGTCCTCTTaGGCTCTCCATCCCGCATCT +
Preference number: 3 (lower is better)
Translates to: TCSSQQSLSPFTSVVAAAWCMSS*ALHPAS
Trigger: AGATGCGGGATGGAGAGCCAAAGAGGACATACACCA...AGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639042.1
3UTR-3UTR CAA 90 bp CCCCTTAGAACAGCCTATGGAGGGACTGAGGAAACGGAATTACATTCAGTTTCCTCCCATCTAGTGGCTTaGGTACCAAGGCTCCCCTTA +
Preference number: 3 (lower is better)
Translates to: PLRTAYGGTEETELHSVSSHLVA*VPRLPL
Trigger: TAAGGGGAGCCTTGGTACCAAAGCCACTAGATGGGA...GGAAACTGAATGTAATTCCGTTTCCTCAGTCCCTCCATAGGCTGTTCTAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR-3UTR CAA 90 bp GAGAGAACCTCCATCTCTGGCAACAGTTTCCATAACAACAGGAATCAGGGATGTCCTCACATCACATCCTaGTGCTCCTGCTTGGACTCC +
Preference number: 3 (lower is better)
Translates to: ERTSISGNSFHNNRNQGCPHITS*CSCLDS
Trigger: GGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGG...ACATCCCTGATTCCTGTTGTTATGGAAACTGTTGCCAGAGATGGAGGTTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR GCA 72 bp GCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTaGTACTTATTTCACTGTTGTCCCAGCTTCTCCCCC +
Preference number: 3 (lower is better)
Translates to: AVFVTIHFCRCC*YLFHCCPSFSP
Trigger: GGGGGAGAAGCTGGGACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR GCA 72 bp AGGGCATCTTGTACATCCACTGGGAATAAATTGCCTTaGACTTGGCGGCTTCCTCTGCAGATTGTTGCTGCT +
Preference number: 3 (lower is better)
Translates to: RASCTSTGNKLP*TWRLPLQIVAA
Trigger: AGCAGCAACAATCTGCAGAGGAAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGGATGTACAAGATGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
3UTR-3UTR CAA 90 bp GACTACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGCCTCATCACAGCAGTCTTaGTCACCATTCACTTCTGTC +
Preference number: 3 (lower is better)
Translates to: DYFYAYDVDIQNSEGMVASSQQS*SPFTSV
Trigger: GACAGAAGTGAATGGTGACAAAGACTGCTGTGATGA...GGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR GCA 72 bp ACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTaGCAGTTTAATGTACAGTTACTCTGTACCACGTCC +
Preference number: 3 (lower is better)
Translates to: TQGLTTFTTNKL*QFNVQLLCTTS
Trigger: GGACGTGGTACAGAGTAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435360.7
ENST00000638281.1
ENST00000639921.1
3UTR GCA 72 bp ACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTaGTGCTACTTATTTCACTGTTGTCCCAGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: TAVFVTIHFCRC*CYLFHCCPSFS
Trigger: GGAGAAGCTGGGACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR-3UTR CAA 90 bp CTCGTGCCTCAGTTTTACAATTGTAAAATAGGGCACTACCTAGAATACTGGGTATCCCATCTAGTGGCTTaGGTACCAAGGCTCCCCTTA +
Preference number: 3 (lower is better)
Translates to: LVPQFYNCKIGHYLEYWVSHLVA*VPRLPL
Trigger: TAAGGGGAGCCTTGGTACCAAAGCCACTAGATGGGA...TACCCAGTATTCTAGGTAGTGCCCTATTTTACAATTGTAAAACTGAGGCACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586125.2
3UTR GCA 72 bp ATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTaGTGCTGCTACTTATTTCACTGTTGTCCCAGCTTC +
Preference number: 3 (lower is better)
Translates to: ITAVFVTIHFCR*CCYLFHCCPSF
Trigger: GAAGCTGGGACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
3UTR TCA 72 bp TTCCTGACTTCACATTTAGGTCAGAGAAGGAAAGTGTaGACTCAGATTTATCCAGTGGTAAACACTGATCAG +
Preference number: 3 (lower is better)
Translates to: FLTSHLGQRRKV*TQIYPVVNTDQ
Trigger: CTGATCAGTGTTTACCACTGGATAAATCTGAGTTCACACTTTCCTTCTCTGACCTAAATGTGAAGTCAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CCA 90 bp TTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCGGCGCCTCCTGATAACTaGCCGCCTCCCGCACGTGCC +
Preference number: 4 (lower is better)
Translates to: FLQPRQRLLITGRLPHVPAPPDN*PPPARA
Trigger: GGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGC...CGGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR TCA 90 bp GGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GCTGVDVSALSTRPPGCRQGPHA*GAGSEL
Trigger: CAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTG...CCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp CAGCCGGGCGCTGTTGGCGGTGAGTTGATCGAGCCGCAGCCGCAGCTCTCGCAGCACCCGGGTCGGGAGTaGAGGGGGCATTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QPGAVGGELIEPQPQLSQHPGRE*RGHSSQ
Trigger: CTGGCTCGAATGCCCCCTCCACTCCCGACCCGGGTG...CTGCGAGAGCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGCGCCCGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR CCA 90 bp TTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCGGCTTCGTGCTTGGCCTaGCGGAGCAGCTCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: FLQPRQRLLITGRLPHVPASCLA*RSSSAL
Trigger: CAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGC...CGGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR TCA 90 bp TTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCGCTTTCAGGGCTGCGGTaGGGTCTGGCTTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: FLQPRQRLLITGRLPHVPLSGLR*GLAWPR
Trigger: ACGTGGCCAAGCCAGACCTCACCGCAGCCCTGAAAG...CGGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp CTTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCGAGCTCCATCATCTCTaGCCGCTCACTGGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LPPAAPAPPDNWPPPARAELHHL*PLTGPG
Trigger: ACCCGGGCCAGTGAGCGGGCAGAGATGATGGAGCTC...GGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CCA 90 bp CCCCTCTTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGGCTGCGGTGAGGTCTaGCTTGGCCACGTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PLFLQPRQRLLITGRLPHGCGEV*LGHVKL
Trigger: GAGCTTGACGTGGCCAAGCCAGACCTCACCGCAGCC...GTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAAGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR TCA 90 bp GCTTCGTGCTTGGCCTGGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCCACCATCATCTCCCCTaGGGAGACGTAGGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: ASCLAWRSSSALRAAASVHHHLP*GDVGAA
Trigger: CGCCGCTCCTACGTCTCCTCAGGGGAGATGATGGTG...GACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR TCA 90 bp GGGCGGGTGCTGACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCCTTTCAGGGCTGCGGTaGGGTCTGGCTTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: GRVLTEAAQVRVGSDMLTLSGLR*GLAWPR
Trigger: ACGTGGCCAAGCCAGACCTCACCGCAGCCCTGAAAG...GGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGTCAGCACCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CTTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCTCCTGCTCGCGCATCTaGCTCTCCAGGGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: LPPAAPAPPDNWPPPARASCSRI*LSRDSF
Trigger: GAACGAGTCCCTGGAGAGGCAGATGCGCGAGCAGGA...GGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp ACTGAGGCAGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGAGGCAGAGATCTCCCTaGCCGAGCACCTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TEAEISLPEHLGPPFSFRRQRSP*PSTSAR
Trigger: GCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCT...CCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCTCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCGCAGCCGGCCCTGGGTaGCCCAGGTGCCCATTCAGT +
Preference number: 4 (lower is better)
Translates to: GLGKSQAISSGPASLPDGAAGPG*PRCPFS
Trigger: ACTGAATGGGCACCTGGGGCACCCAGGGCCGGCTGC...GCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCACCCGGGTCGGGAGTaGAGGGGGCATTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLGKSQAISSGPASLPDGHPGRE*RGHSSQ
Trigger: CTGGCTCGAATGCCCCCTCCACTCCCGACCCGGGTG...GCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp CTTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCACGTCAAGCTCCACATaGACCTGCTGTCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPPAAPAPPDNWPPPARATSSST*TCCRAS
Trigger: GCTGGCCCGACAGCAGGTCCATGTGGAGCTTGACGT...GGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CCA 90 bp AGCAGAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACGGCGCCGGTAGTCGTTaGCTTCGTGCTTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SREPGVQAQRDPRGPPSDGAGSR*LRAWPG
Trigger: GCCAGGCCAAGCACGAAGCCAACGACTACCGGCGCC...GTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR TCA 90 bp CGGGTGCTGACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCCGCGCTTCCGGCTGGGTGTaGCATCTCATGGGCACTACC +
Preference number: 4 (lower is better)
Translates to: RVLTEAAQVRVGSDMLTRASGWV*HLMGTT
Trigger: GGTAGTGCCCATGAGATGTCACACCCAGCCGGAAGC...GCGGGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGTCAGCACCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCATGCAGTGGCCTGGGGAATGGACCCCCTGTaGCCGCTGCGGAGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: HGLIISCPGARPEHAVAWGMDPL*PLRSAW
Trigger: CCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCC...CCAGGCCACTGCATGCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR GCA 90 bp TTCGTGCTTGGCCTGGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCAGTGCTGTCGGGCCAGCTaGTCCTGGAGTTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: FVLGLAEQLRVAGSSVCQCCRAS*SWSSRT
Trigger: GGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCA...CTGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp GGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTGGGGAGCAGCTCCGCGTTaGGGGCAGCAGCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GGAAPRCGQQRLSGLQTWGAAPR*GQQRLS
Trigger: TGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCC...CCAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp GCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCAGGCAGAGATCTCCCTaGCCGAGCACCTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AGWAWESPKPSAQVQPASRQRSP*PSTSAR
Trigger: GCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCT...GGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGGTGACCGCTGCGGAGTaGGTGGGGAGCAGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: FTTFWEWTPCDRCGVRGEVTAAE*VGSSGA
Trigger: TGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCAC...CTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp CATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGACCCCCTGTGACCGCTaGGGAGTGCGTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HQLRSSQPPGWPDMQEGGTPCDR*GVRGEQ
Trigger: CTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGT...CCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAGCTTGGTGGGCTCCTTaGCCCGCAGCTGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ESLASRHSETQGALPVTGAWWAP*PAAGSA
Trigger: AGCTGAACCAGCTGCGGGCCAAGGAGCCCACCAAGC...TCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp GGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTGGCGTTGGCTTCGTGCTTaGCCTGGCGGAGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GGAAPRCGQQRLSGLQTWRWLRA*PGGAAP
Trigger: CGGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAACG...CCAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CCA 90 bp GCGGGTGCTGACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCCGACCACCTTCTGGGAATaGACCCCCTGTGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: AGADGGSPGTCGQRHADPTTFWE*TPCDRC
Trigger: GCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGT...CGGGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGTCAGCACCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp AATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCAGTGGCGCATCGGCCACCACCTTCTGGGAATaGACCCCCTGTGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: NGPPVTAAECVGSSGASATTFWE*TPCDRC
Trigger: GCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGT...GGCCGATGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR TCA 90 bp AGCAACTATCCTGCTTCTGCTCGGGCCCCTCATGAGACGGGGCAGAGGCCACCATGGACGTGTCAGCCCTaGGCACCCGGCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SNYPASARAPHETGQRPPWTCQP*APGLQA
Trigger: AGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCA...TGGTGGCCTCTGCCCCGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR TCA 90 bp CCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PSAQVQPASRMARYAGGWQGPHA*GAGSEL
Trigger: CAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTG...CCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCAGGGCCTGGAGCACTaGGGCAGAGATCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: AGWAWESPKPSAQVQPASQGLEH*GRDLPA
Trigger: GGCAGGGAGATCTCTGCCTCAGTGCTCCAGGCCCTG...GGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGCAGGGCCTGGAGCACTaGGGCAGAGATCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PSAQVQPASRMARYAGGWQGLEH*GRDLPA
Trigger: GGCAGGGAGATCTCTGCCTCAGTGCTCCAGGCCCTG...CCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CTTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCGCCAGCGCCTTGTTTTaGTGTTCCAGGAAGCGAACC +
Preference number: 4 (lower is better)
Translates to: LPPAAPAPPDNWPPPARAASALF*CSRKRT
Trigger: GGTTCGCTTCCTGGAACAGCAAAACAAGGCGCTGGC...GGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp CCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCGCTCCTTTGCCTCATACTGCGTaGGGATCTCTTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PAAPAPPDNWPPPARAAPLPHTA*GSLSGL
Trigger: CAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAA...AGGAGCGGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp GGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGAGGTTGGAGAAGGTCTaGACGGGAATGGTGATCCGG +
Preference number: 4 (lower is better)
Translates to: GCTGVDVSALSTRPPGCRRLEKV*TGMVIR
Trigger: CCGGATCACCATTCCCGTGCAGACCTTCTCCAACCT...CCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp GCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGAGGTTGGAGAAGGTCTaGACGGGAATGGTGATCCGG +
Preference number: 4 (lower is better)
Translates to: AGQSAVSERQAANREPAARLEKV*TGMVIR
Trigger: CCGGATCACCATTCCCGTGCAGACCTTCTCCAACCT...CGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp GGGCGGGTGCTGACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCACCCGGCCTCCAGGCTaGAGGAATATGAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GRVLTEAAQVRVGSDMLTTRPPG*RNMSQC
Trigger: ACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGT...GGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGTCAGCACCCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CTGACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCCTGTGCCAAGGAAGCTaGGGACCAAGGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: LTEAAQVRVGSDMLTRFSLCQGS*GPRPGT
Trigger: GGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAG...GCTGAAGCGGGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGCTGTGCCAAGGAAGCTaGGGACCAAGGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: GWAWESPKPSAQVQPASRLCQGS*GPRPGT
Trigger: GGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAG...CCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAAGGCCAGGGACCACACGCCTGCTGTGCCAAGGAAGCTaGGGACCAAGGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: AQGLCQGSCGPRPGTTRLLCQGS*GPRPGT
Trigger: GGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAG...CAGGCGTGTGGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGAGGCAGAGATCTCCCTaGCCGAGCACCTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: EISLPEHLGPPFSFRFPLRQRSP*PSTSAR
Trigger: GCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCT...CAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTAGGCAGAGATCTCCCTaGCCGAGCACCTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LRSSQPPGWPDMQEGGFPRQRSP*PSTSAR
Trigger: GCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCT...AGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATAGGCAGAGATCTCCCTaGCCGAGCACCTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GKVPSHQLRSSQPPGWPDRQRSP*PSTSAR
Trigger: GCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCT...ATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp AGCAGAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACACAGAGGCTGCTGCTTaGTCAGAGGCCCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SREPGVQAQRDPRGPPSDTEAAA*SEAPEQ
Trigger: CTGCTCTGGGGCCTCTGAGCAAGCAGCAGCCTCTGT...GTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp CAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTGCAGCCGGCCCTGGGTaGCCCAGGTGCCCATTCAGT +
Preference number: 4 (lower is better)
Translates to: QLRSSQPPGWPDMQEGGFAAGPG*PRCPFS
Trigger: ACTGAATGGGCACCTGGGGCACCCAGGGCCGGCTGC...AAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp TTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGACCCCCTGTGACCGCTaGGGAGTGCGTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FRAQSEDSGLYFCGTRKGTPCDR*GVRGEQ
Trigger: CTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGT...CCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp GGGCGGGTGCTGACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCTACGCCTCAAGGCCGTaGCCGATGTGGTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: GRVLTEAAQVRVGSDMLTYASRP*PMWCLV
Trigger: CACAAGACACCACATCGGGCACGGCCTTGAGGCGTA...GGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGTCAGCACCCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640859.1
CDS-3UTR CCA 90 bp GACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGAATATGAGCCAGTGTCACCCGGGTCGGGAGTaGAGGGGGCATTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: DVSALSTRPPGCRNMSQCHPGRE*RGHSSQ
Trigger: CTGGCTCGAATGCCCCCTCCACTCCCGACCCGGGTG...ACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp ATAAAGCAGAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGGCTTCGTGCTTGGCCTaGCGGAGCAGCTCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: IKQRAWRPGTARPKGPSQASCLA*RSSSAL
Trigger: CAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGC...CTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp CCAGGGACTCGTTCGTGCCGCGCAGAGACTCCAGGTCGCAGGTCAAGGACTGCAGGCGCCGGTAGTCGTTaGCTTCGTGCTTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PGTRSCRAETPGRRSRTAGAGSR*LRAWPG
Trigger: GCCAGGCCAAGCACGAAGCCAACGACTACCGGCGCC...TGCAGTCCTTGACCTGCGACCTGGAGTCTCTGCGCGGCACGAACGAGTCCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CCA 90 bp GCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCGGCGCCGGTAGTCGTTaGCTTCGTGCTTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: AGWAWESPKPSAQVQPASGAGSR*LRAWPG
Trigger: GCCAGGCCAAGCACGAAGCCAACGACTACCGGCGCC...GGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp CCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGCGCCTCCTGATAACTaGCCGCCTCCCGCACGTGCC +
Preference number: 4 (lower is better)
Translates to: PKPSAQVQPASRMARYAGAPPDN*PPPARA
Trigger: GGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGC...TCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp GGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTGTGCGTGGGGAGCAGTaGCGCATCGGCCTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: GLSLRTQACTSAAPARGTVRGEQ*RIGLCY
Trigger: GTAGCAGAGGCCGATGCGCCACTGCTCCCCACGCAC...AGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp ATAAAGCAGAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGGCAACCTACAGGCCCTaGAGGAGGGGGCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: IKQRAWRPGTARPKGPSQATYRP*RRGQDS
Trigger: GGAGTCCTGCCCCCTCCTCCAGGGCCTGTAGGTTGC...CTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp ATAAAGCAGAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGGGGACACCCCTAGGCTaGGTCTTGGTGCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: IKQRAWRPGTARPKGPSQGTPLG*VLVRGH
Trigger: ATGGCCCCGCACCAAGACCCAGCCTAGGGGTGTCCC...CTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR CAA 72 bp CTGCCCGGGCTGCCTGGGACACCCCTAGGCTGGGTCTaGGTGCGGGGCCATCATGACAACTTGAACGCCCTT +
Preference number: 4 (lower is better)
Translates to: LPGLPGTPLGWV*VRGHHDNLNAL
Trigger: AAGGGCGTTCAAGTTGTCATGATGGCCCCGCACCAAGACCCAGCCTAGGGGTGTCCCAGGCAGCCCGGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS-3UTR TCA 90 bp CGCGTTGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTGGAGCGGTACCACTCCTGTTGGCGGTGAGTTaGTCGAGCCGCAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RVAGSSVCQVCKLGAVPLLLAVS*SSRSRS
Trigger: GCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAG...GAGTGGTACCGCTCCAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR TCA 90 bp CTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTCTGTTGGCGGTGAGTTaGTCGAGCCGCAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LRSSQPPGWPDMQEGGFPLLAVS*SSRSRS
Trigger: GCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAG...AGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR TCA 90 bp GCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCCTTTCAGGGCTGCGGTaGGGTCTGGCTTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: AQVQPASRMARYAGGWVSLSGLR*GLAWPR
Trigger: ACGTGGCCAAGCCAGACCTCACCGCAGCCCTGAAAG...GGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR TCA 90 bp CAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGGCCATCTCGTCCTTaGGGCTCTGCCCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QVGPGKVPSHQLRSSQPPGPSRP*GSAPLP
Trigger: AGGAAGAGGGGCAGAGCCTCAAGGACGAGATGGCCC...GGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR TCA 90 bp CCCAGGTGGCAGGACGTCCCCACCCATCTTAGACTGATCAGGGTCAGTCTAGGATGCTCGGGCCCCTCATaGGACGGGGCAGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: PRWQDVPTHLRLIRVSLGCSGPS*DGAEAT
Trigger: GGTGGCCTCTGCCCCGTCTCATGAGGGGCCCGAGCA...TCCTAGACTGACCCTGATCAGTCTAAGATGGGTGGGGACGTCCTGCCACCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR TCA 90 bp GAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGTGCTCGGGCCCCTCATaGGACGGGGCAGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: EHLGPPFSFRFPLTHSWVCSGPS*DGAEAT
Trigger: GGTGGCCTCTGCCCCGTCTCATGAGGGGCCCGAGCA...CACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp GCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTGGGGCGGCCTGGTATaGCACAGCAAGGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: AQVQPASRMARYAGGWVSWGGLV*HSKEEA
Trigger: GGCCTCTTCCTTGCTGTGTCATACCAGGCCGCCCCA...GGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp TGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CAGWAWESPKPSAQVQPAQGPHA*GAGSEL
Trigger: CAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTG...GGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp AGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSGPASLPDGQICRRVGFQGPHA*GAGSEL
Trigger: CAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTG...GAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CCTCTTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGTTGCTGGACGCCATTaGCTCATACTGCGTGCGGAT +
Preference number: 4 (lower is better)
Translates to: PLPPAAPAPPDNWPPPARVAGRH*LILRAD
Trigger: ATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAAC...ACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp GTGAGGCTCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGGAGCAGCTCCGCGTTaGGGGCAGCAGCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: VRLTPCQAGQSAVSERQAGAAPR*GQQRLS
Trigger: TGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCC...TGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGAGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp GGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATGGAGCAGCTCCGCGTTaGGGGCAGCAGCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GKVPSHQLRSSQPPGWPDGAAPR*GQQRLS
Trigger: TGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCC...ATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp CTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTCCAGAGCAGCTCCACTaGGCACCCAAGGACTCACCA +
Preference number: 4 (lower is better)
Translates to: LASRHSETQGALPVTGRGPEQLH*APKDSP
Trigger: TGGTGAGTCCTTGGGTGCGCAGTGGAGCTGCTCTGG...ACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp CAGCCGGGCGCTGTTGGCGGTGAGTTGATCGAGCCGCAGCCGCAGCTCTCGCAGTCAGCCAGCATTGAGTaGCCCAGCCAGGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: QPGAVGGELIEPQPQLSQSASIE*PSQGEI
Trigger: GATTTCTCCCTGGCTGGGGCACTCAATGCTGGCTGA...CTGCGAGAGCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGCGCCCGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR GCA 90 bp TTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCCTGGGTGCCCCAGGTaGCCATTCAGTTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: FTTFWEWTPCDRCGVRGEPGCPR*PFSSTS
Trigger: GCTGGTGGAACTGAATGGGCACCTGGGGCACCCAGG...CTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR GCA 90 bp TTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGTCGGCCTCTGCTACCTaGAGAGCCCAGACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: FTTFWEWTPCDRCGVRGESASAT*RAQTSP
Trigger: GGGAGAGGTCTGGGCTCTGCAGGTAGCAGAGGCCGA...CTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp TCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGTCGGCCTCTGCTACCTaGAGAGCCCAGACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SGLSLRTQACTSAAPARGSASAT*RAQTSP
Trigger: GGGAGAGGTCTGGGCTCTGCAGGTAGCAGAGGCCGA...CCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp ACCTGCCCACAGCGTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGGCGCATCGGCCTCTaGTACCTGCAGAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: TCPQRAHRWHPWMAAQVDWRIGL*YLQSPD
Trigger: GTCTGGGCTCTGCAGGTAGCAGAGGCCGATGCGCCA...GTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCACGCTGTGGGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCATGCAGTGGCCTGGTGGCGCATCGGCCTCTaGTACCTGCAGAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: HGLIISCPGARPEHAVAWWRIGL*YLQSPD
Trigger: GTCTGGGCTCTGCAGGTAGCAGAGGCCGATGCGCCA...CCAGGCCACTGCATGCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp ATAAAGCAGAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGAGACGTCTGCCAGCTTaGTGGGCTCCTTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: IKQRAWRPGTARPKGPSQRRLPA*WAPWPA
Trigger: TGCGGGCCAAGGAGCCCACCAAGCTGGCAGACGTCT...CTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp GGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCACGTCAAGCTCCACATaGACCTGCTGTCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLGKSQAISSGPASLPDGTSSST*TCCRAS
Trigger: GCTGGCCCGACAGCAGGTCCATGTGGAGCTTGACGT...GCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp GTGAGGCTCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCACGTTGGCTTCGTGCTTaGCCTGGCGGAGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: VRLTPCQAGQSAVSERQARWLRA*PGGAAP
Trigger: CGGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAACG...TGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGAGCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp CCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGATTGCTGGGTGCTGGGTaGGTGCCGTCTGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PKPSAQVQPASRMARYAGLLGAG*VPSGRP
Trigger: AGGCCTGCCAGACGGCACCCACCCAGCACCCAGCAA...TCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp CCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGAGTTGCTGGGTGCTaGGTGGGTGCCGTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PKPSAQVQPASRMARYAGGVAGC*VGAVWQ
Trigger: CTGCCAGACGGCACCCACCCAGCACCCAGCAACTCC...TCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp CTGCTACCTGCAGAGCCCAGACCTCTCCCCACGCTACCTCAAGGCCGTGCCCGAGGGTGTGCTAGTTGCTaGCTTCCGGCTGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: LLPAEPRPLPTLPQGRARGCASC*LPAGCD
Trigger: GTCACACCCAGCCGGAAGCCAGCAACTAGCACACCC...TCGGGCACGGCCTTGAGGTAGCGTGGGGAGAGGTCTGGGCTCTGCAGGTAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp TCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCGGGTGTGCTAGTTGCTaGCTTCCGGCTGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: SPPSGNGPPVTAAECVGSGCASC*LPAGCD
Trigger: GTCACACCCAGCCGGAAGCCAGCAACTAGCACACCC...GCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GACCGCTGCGGAGTGCGTGGGGAGCAGTGGCGCATCGGCCTCTGCTACCTGCAGGCAGAGACTGGGCCATaGACTCATCATCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: DRCGVRGEQWRIGLCYLQAETGP*THHLLS
Trigger: GGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGC...CTGCAGGTAGCAGAGGCCGATGCGCCACTGCTCCCCACGCACTCCGCAGCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CAGGGCCTAGCAGGACAGGGGCAGCTGCAAGCCCCACCTAGAAGTACCCTGGTAGCAACCTACAGGCCCTaGAGGAGGGGGCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: QGLAGQGQLQAPPRSTLVATYRP*RRGQDS
Trigger: GGAGTCCTGCCCCCTCCTCCAGGGCCTGTAGGTTGC...TACCAGGGTACTTCTAGGTGGGGCTTGCAGCTGCCCCTGTCCTGCTAGGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR CAA 72 bp TTGGCTTCGTGCTTGGCCTGGCGGAGCAGCTCCGCGTaGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTG +
Preference number: 4 (lower is better)
Translates to: LASCLAWRSSSA*RAAASVRSANL
Trigger: CAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR CAA 72 bp CCCACGCTACCTCAAGGCCGTGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCCAAGGAAGCTGCGGAC +
Preference number: 4 (lower is better)
Translates to: PTLPQGRARCGV*WLKGCAKEAAD
Trigger: GTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGTAGCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp CTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTCACCATCATCTCCCCTaGGGAGACGTAGGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: LRSSQPPGWPDMQEGGFPHHHLP*GDVGAA
Trigger: CGCCGCTCCTACGTCTCCTCAGGGGAGATGATGGTG...AGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR TCA 90 bp TGCTGTCGGGCCAGCTGCTCCTGGAGTTCCCGAACCTCCTCCTCGTGGATCTTCGGGCCATCTCGTCCTTaGGGCTCTGCCCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CCRASCSWSSRTSSSWIFGPSRP*GSAPLP
Trigger: AGGAAGAGGGGCAGAGCCTCAAGGACGAGATGGCCC...GAAGATCCACGAGGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR TCA 90 bp GGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGCTCGTTCTCAGATCCTaGGACTCGCTCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GWAWESPKPSAQVQPASRLVLRS*DSLGCG
Trigger: TCCACAGCCGAGCGAGTCTCAGGATCTGAGAACGAG...CCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GCAGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTGCTTCCGGCTGGGTGTaGCATCTCATGGGCACTACC +
Preference number: 4 (lower is better)
Translates to: AEISLPEHLGPPFSFRFPASGWV*HLMGTT
Trigger: GGTAGTGCCCATGAGATGTCACACCCAGCCGGAAGC...AGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GGGCATCTACTATTGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGGGCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GHLLLLEAGCASCWLPAGQGPHA*GAGSEL
Trigger: CAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTG...CCCAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAGTAGATGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp ATAAAGCAGAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGAAGGGGCCCTCCCAGTaGCAGGAAGAGGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: IKQRAWRPGTARPKGPSQKGPSQ*QEEVRQ
Trigger: CTGTCTCACCTCTTCCTGTCACTGGGAGGGCCCCTT...CTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp TGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCGCGGGTGGAATTTGGTaGGGGCATGGGCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: CAGWAWESPKPSAQVQPAAGGIW*GHGPQR
Trigger: TCTCTGGGGCCCATGCCCTCACCAAATTCCACCCGC...GGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp TCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTGTGGGAATGGACCCCCTGTaGCCGCTGCGGAGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: SHGHYPASFSDPETRSAVGMDPL*PLRSAW
Trigger: CCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCC...CACAGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp GCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGAGTGGATCCCTTTGCCCTaGTCCTCAGTCCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ASRHSETQGALPVTGRGEWIPLP*SSVPVW
Trigger: CCAGACTGGGACTGAGGATCAGGGCAAAGGGATCCA...CTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp TGTCGGGCCAGCTGCTCCTGGAGTTCCCGAACCTCCTCCTCGTGGATCTTCCTCTGCTGTCGGGCCAGCTaGTCCTGGAGTTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: CRASCSWSSRTSSSWIFLCCRAS*SWSSRT
Trigger: GGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCA...GAGGAAGATCCACGAGGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR GCA 90 bp CGCGTTGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTGGAGCGGTACCACTCAGCTCCACATGGACCTaGTGTCGGGCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RVAGSSVCQVCKLGAVPLSSTWT*CRASCS
Trigger: GGAGCAGCTGGCCCGACAGCAGGTCCATGTGGAGCT...GAGTGGTACCGCTCCAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp CGGGTGCTGACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCCGCGCCATTGCCTCATACTaGGTGCGGATCTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: RVLTEAAQVRVGSDMLTRAIASY*VRISFR
Trigger: CCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGC...GCGGGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGTCAGCACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GCAGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTCCTGCTCGCGCATCTaGCTCTCCAGGGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: AEISLPEHLGPPFSFRFPSCSRI*LSRDSF
Trigger: GAACGAGTCCCTGGAGAGGCAGATGCGCGAGCAGGA...AGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CCCAGGTCCACCACCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGCACCTGCCCACAGCGTaGCCACAGATGGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: PRSTTTRLCNLGKSPTSQHLPTA*PQMASL
Trigger: CAGGGATGCCATCTGTGGGCACGCTGTGGGCAGGTG...CTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGGTGGTGGACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR GCA 90 bp AGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGACTGCGTCCCCTCCAGTCTaGACGGGGCAGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RPPGGSCLTSHPCAPAWTASPPV*TGQSSW
Trigger: CCAGGAGGACTGCCCCGTGCAGACTGGAGGGGACGC...AGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR GCA 90 bp CATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCA +
Preference number: 4 (lower is better)
Translates to: HQLRSSQPPGWPDMQEGGVAQGL*QGSCGP
Trigger: TGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCAC...CCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCAGGCAGAGATCTCCCTaGCCGAGCACCTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: VLVQVGPGKVPSHQLRSSRQRSP*PSTSAR
Trigger: GCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCT...GCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGGGTGTGACATCTCATGCAGCCGGCCCTGGGTaGCCCAGGTGCCCATTCAGT +
Preference number: 4 (lower is better)
Translates to: CWRQGVLVAGFRLGVTSHAAGPG*PRCPFS
Trigger: ACTGAATGGGCACCTGGGGCACCCAGGGCCGGCTGC...ATGAGATGTCACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp GTACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGGTGACCGCTGCGGAGTaGGTGGGGAGCAGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: VRVGSDMLTRFSIRMFSLVTAAE*VGSSGA
Trigger: TGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCAC...CAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp GGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTAACCCCCTGTGACCGCTaGGGAGTGCGTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GLRPVLLRHPQGGLLLRLTPCDR*GVRGEQ
Trigger: CTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGT...TAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp AGACTGGGCCATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCATGCATCAGGCCTGTACTTCTaGGGCACCCGCAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RLGHGLIISCPGARPEHASGLYF*GTRKGD
Trigger: GTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGA...TGCATGCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATGGCCCAGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR GCA 90 bp TCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCTGCCTCCTTCAGGTATaGACCTGGCCCTCACCACTG +
Preference number: 4 (lower is better)
Translates to: SPPSGNGPPVTAAECVGSCLLQV*TWPSPL
Trigger: CAGTGGTGAGGGCCAGGTGCATACCTGAAGGAGGCA...GCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp TCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATCTGGTGGGGCAGGACTCCAGTaGCCTTCCCACGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SERQAANREPAAFHLQSGGAGLQ*PSHEAL
Trigger: CAGGGCCTCGTGGGAAGGGCACTGGAGTCCTGCCCC...ACCAGATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp CAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCACGTCAAGCTCCACATaGACCTGCTGTCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QVGPGKVPSHQLRSSQPPTSSST*TCCRAS
Trigger: GCTGGCCCGACAGCAGGTCCATGTGGAGCTTGACGT...GGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp AAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGGGCTGCGGTGAGGTCTaGCTTGGCCACGTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: KPSAQVQPASRMARYAGGGCGEV*LGHVKL
Trigger: GAGCTTGACGTGGCCAAGCCAGACCTCACCGCAGCC...CCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp AACCCTGAAGTGGGCCCTCCCAGTCCCATCTCTGGGCACAGATCCCACCAGTCTGCTTCGTGCTTGGCCTaGCGGAGCAGCTCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: NPEVGPPSPISGHRSHQSASCLA*RSSSAL
Trigger: CAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGC...AGACTGGTGGGATCTGTGCCCAGAGATGGGACTGGGAGGGCCCACTTCAGGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp GGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATACGTTGGCTTCGTGCTTaGCCTGGCGGAGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GKSQAISSGPASLPDGQIRWLRA*PGGAAP
Trigger: CGGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAACG...TATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp AAAGCAGAGTGGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGAGAACCCTGAAGTaGGCCCTCCCAGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: KAEWVHWGGRVSPEHPASRRTLK*ALPVPS
Trigger: AGATGGGACTGGGAGGGCCCACTTCAGGGTTCTCCT...GGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCCACTCTGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp GAGGCAGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTGGGTGTGCTAGTTGCTaGCTTCCGGCTGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: EAEISLPEHLGPPFSFRFGCASC*LPAGCD
Trigger: GTCACACCCAGCCGGAAGCCAGCAACTAGCACACCC...AAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGAGCATGCAGTGGCCTaGGACAAAGACCGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AISSGPASLPDGQICRRVEHAVA*DKDRQH
Trigger: GTGCTGGCGGTCTTTGTCCCAGGCCACTGCATGCTC...CACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGCCGCTGCGGAGTGCGTaGGGAGCAGTGGCGCATCGG +
Preference number: 4 (lower is better)
Translates to: DSVLVQVGPGKVPSHQLRPLRSA*GAVAHR
Trigger: CCGATGCGCCACTGCTCCCCACGCACTCCGCAGCGG...CCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACCGCTGCGGAGTGCGTaGGGAGCAGTGGCGCATCGG +
Preference number: 4 (lower is better)
Translates to: PVLLRHPQGGLLLRLRCGPLRSA*GAVAHR
Trigger: CCGATGCGCCACTGCTCCCCACGCACTCCGCAGCGG...TCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GAGCCCAGACCTCTCCCCACGCTACCTCAAGGCCGTGCCCGATGTGGTGTCTTGACCACCTTCTGGGAATaGACCCCCTGTGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: EPRPLPTLPQGRARCGVLTTFWE*TPCDRC
Trigger: GCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGT...CAAGACACCACATCGGGCACGGCCTTGAGGTAGCGTGGGGAGAGGTCTGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp AAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGAGTTCTGCTGTCGAATaGGGTGCAGGGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: KLGKAPCLRGRQLTASRRSSAVE*GAGRGR
Trigger: TCTTCCCCTCCCTGCACCCCATTCGACAGCAGAACT...CCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp GCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAAGGCCAGGGACCACACGCCTGTGGCAAAGCGGTCATTaGGCTCCATCATCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: AQGLCQGSCGPRPGTTRLWQSGH*APSSLP
Trigger: GGGCAGAGATGATGGAGCTCAATGACCGCTTTGCCA...CAGGCGTGTGGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp GGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGTGGCAAAGCGGTCATTaGGCTCCATCATCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GWAWESPKPSAQVQPASRWQSGH*APSSLP
Trigger: GGGCAGAGATGATGGAGCTCAATGACCGCTTTGCCA...CCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR TCA 90 bp CTTCTGCCTCACAGTGGCCAGGTCCTGTGCCAGATTGTCCCTCTCAACCTCCAGCTGTTGGCGGTGAGTTaGTCGAGCCGCAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LLPHSGQVLCQIVPLNLQLLAVS*SSRSRS
Trigger: GCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAG...CTGGAGGTTGAGAGGGACAATCTGGCACAGGACCTGGCCACTGTGAGGCAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR TCA 90 bp GGCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGCTGTTGGCGGTGAGTTaGTCGAGCCGCAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GSACSGICRQGRCQALTQLLAVS*SSRSRS
Trigger: GCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAG...CTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR TCA 90 bp CCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATCTTTCAGGGCTGCGGTaGGGTCTGGCTTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: PCLRGRQLTASRRRSIYNLSGLR*GLAWPR
Trigger: ACGTGGCCAAGCCAGACCTCACCGCAGCCCTGAAAG...ATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR TCA 90 bp ACGTCCTGGGCTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTGGGCCATCTCGTCCTTaGGGCTCTGCCCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TSWAGHCSSWENDAVQALGPSRP*GSAPLP
Trigger: AGGAAGAGGGGCAGAGCCTCAAGGACGAGATGGCCC...AAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAGCCCAGGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR TCA 90 bp CCCAGGTGGCAGGACGTCCCCACCCATCTTAGACTGATCAGGGTCAGTCTAGGATGGGATCTGGGCAGGTaGCTGCCCCAGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PRWQDVPTHLRLIRVSLGWDLGR*LPQVAG
Trigger: TCCTGCCACCTGGGGCAGTCACCTGCCCAGATCCCA...TCCTAGACTGACCCTGATCAGTCTAAGATGGGTGGGGACGTCCTGCCACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR TCA 90 bp CTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRTQACTSAAPARGTTFTQGPHA*GAGSEL
Trigger: CAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTG...CGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR TCA 90 bp ATCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGACAGGGCCTGGAGCACTaGGGCAGAGATCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: IPQVDERLFHQAGRAGPGQGLEH*GRDLPA
Trigger: GGCAGGGAGATCTCTGCCTCAGTGCTCCAGGCCCTG...TCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CATCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTGCAGGGCCTGGAGCACTaGGGCAGAGATCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: HLMGTTQPRSQILRLARLQGLEH*GRDLPA
Trigger: GGCAGGGAGATCTCTGCCTCAGTGCTCCAGGCCCTG...CAGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp AAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCAGTTCCTGGGAAAATaGCGCAGTCCAGGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: KLGKAPCLRGRQLTASRRQFLGK*RSPGPL
Trigger: TAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTG...CCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp CTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTAGTGACAGGAAGAGGTaGGACAGAGGCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LASRHSETQGALPVTGRGSDRKR*DRGCCL
Trigger: CAAGCAGCAGCCTCTGTCTCACCTCTTCCTGTCACT...ACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp GCAGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGCAGGTCTGGGACCTaGTCTGAGAAGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AVAWDKDRQHLYRTQYLKGRSGT*SEKWRG
Trigger: GCCCCTCCACTTCTCAGATCAGGTCCCAGACCTGCC...CTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR TCA 90 bp CGGACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTAGCCACACCAAAGTGCTaGCGGACTTTGATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RTKARDHTPEVLVRSCLVATPKC*RTLMGG
Trigger: CCCGCCCATCAAAGTCCGTCAGCACTTTGGTGTGGC...TACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp TTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGCCACACCAAAGTGCTaGCGGACTTTGATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: FRAQSEDSGLYFCGTRKGATPKC*RTLMGG
Trigger: CCCGCCCATCAAAGTCCGTCAGCACTTTGGTGTGGC...CCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CTGCTACCTGCAGAGCCCAGACCTCTCCCCACGCTACCTCAAGGCCGTGCCCGAGAAGCCAGCATTGAGTaGCCCAGCCAGGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: LLPAEPRPLPTLPQGRAREASIE*PSQGEI
Trigger: GATTTCTCCCTGGCTGGGGCACTCAATGCTGGCTTC...TCGGGCACGGCCTTGAGGTAGCGTGGGGAGAGGTCTGGGCTCTGCAGGTAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCGCCAGCGCCTTGTTTTaGTGTTCCAGGAAGCGAACC +
Preference number: 4 (lower is better)
Translates to: GLGKSQAISSGPASLPDGASALF*CSRKRT
Trigger: GGTTCGCTTCCTGGAACAGCAAAACAAGGCGCTGGC...GCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp CCTCTCAACCTCCAGCCGGGCGCTGTTGGCGGTGAGTTGATCGAGCCGCAGCCGCAGGGTGGCTTCATCTaGTTCCTGTCTATAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLNLQPGAVGGELIEPQPQGGFI*FLSIGS
Trigger: GCTGCCTATAGACAGGAAGCAGATGAAGCCACCCTG...CGGCTGCGGCTCGATCAACTCACCGCCAACAGCGCCCGGCTGGAGGTTGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR GCA 90 bp ATGCCTAGCGCCATCCCAATTGCCTCCTCCTCCATCTCTACCAGCGTCCCCTCCAGCTCCACATGGACCTaGTGTCGGGCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: MPSAIPIASSSISTSVPSSSTWT*CRASCS
Trigger: GGAGCAGCTGGCCCGACAGCAGGTCCATGTGGAGCT...GGAGGGGACGCTGGTAGAGATGGAGGAGGAGGCAATTGGGATGGCGCTAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATAGCTCCACATGGACCTaGTGTCGGGCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PCLRGRQLTASRRRSIYNSSTWT*CRASCS
Trigger: GGAGCAGCTGGCCCGACAGCAGGTCCATGTGGAGCT...ATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp GCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCGATCTCTTTCAGGGCTaGGGTGAGGTCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AQVQPASRMARYAGGWVSDLFQG*GEVWLG
Trigger: GCCAAGCCAGACCTCACCGCAGCCCTGAAAGAGATC...GGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp GAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAGCCATTGCCTCATACTaGGTGCGGATCTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: ESLASRHSETQGALPVTGAIASY*VRISFR
Trigger: CCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGC...TCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp GGCTTCGTGCTTGGCCTGGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCACTCTTCGGCTTCATaGATGTTGCTGGACGCCATT +
Preference number: 4 (lower is better)
Translates to: GFVLGLAEQLRVAGSSVCHSSAS*MLLDAI
Trigger: AATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTG...ACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp CTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGGGAGCAGCTCCGCGTTaGGGGCAGCAGCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LRTQACTSAAPARGTTFTGAAPR*GQQRLS
Trigger: TGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCC...CGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp AAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCTCGTCCTTGAGGCTCTaGCCCTCTTCCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KSQAISSGPASLPDGQICSSLRL*PSSSSR
Trigger: GCGGCTGGAGGAAGAGGGGCAGAGCCTCAAGGACGA...GCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp CAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCAGGTCTGGGGAAATGTaGCAGCAGAGGCGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: QVGPGKVPSHQLRSSQPPRSGEM*QQRRSN
Trigger: GTTGCTCCGCCTCTGCTGGCACATTTCCCCAGACCT...GGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CCAGAGCATGCAGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGCATGCCCCTCCAGACTaGCCCTTGGGGGTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PEHAVAWDKDRQHLYRTQHAPPD*PLGVSF
Trigger: GAAACTCACCCCCAAGGGGCAGTCTGGAGGGGCATG...CTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACTGCATGCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp AGACACTTGAGTCATCGCTCAGGAGGTCCTTCTGGGATCTGGGCAGGTGACTGCGGGCGATGTAGTAGGTaGCCCCCGCCCTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RHLSHRSGGPSGIWAGDCGRCSR*PPPSSP
Trigger: AGGGGAGGAGGGCGGGGGGCACCTACTACATCGCCC...GCAGTCACCTGCCCAGATCCCAGAAGGACCTCCTGAGCGATGACTCAAGTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp AAAGCAGAGTGGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCCAGATCCCACCAGTCTaGTCACCAGTCTGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: KAEWVHWGGRVSPEHPASQIPPV*SPVCSV
Trigger: GACTGAGCAGACTGGTGAGCAGACTGGTGGGATCTG...GGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCCACTCTGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp CAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTTCGCAGGGTGTGCTAGTTaGTGGCTTCCGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: QVQPASRMARYAGGWVSFAGCAS*WLPAGC
Trigger: ACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGC...GAAGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp ACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACCCGCAGGGTGTGCTAGTTaGTGGCTTCCGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: TKARDHTPEVLVRSCLVPAGCAS*WLPAGC
Trigger: ACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGC...GGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp AGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCGCAGGGTGTGCTAGTTaGTGGCTTCCGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSGPASLPDGQICRRVGFAGCAS*WLPAGC
Trigger: ACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGC...GAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGCAGGGTGTGCTAGTTaGTGGCTTCCGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: FRAQSEDSGLYFCGTRKGAGCAS*WLPAGC
Trigger: ACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGC...CCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCA +
Preference number: 4 (lower is better)
Translates to: LRSSQPPGWPDMQEGGFPVAQGL*QGSCGP
Trigger: TGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCAC...AGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCA +
Preference number: 4 (lower is better)
Translates to: AQSEDSGLYFCGTRKGDYVAQGL*QGSCGP
Trigger: TGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCAC...GTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCAGTGGCGCAGAGACTCAGTTCTTGTaGAGGTTGGGCCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SGNGPPVTAAECVGSSGAETQFL*RLGLGK
Trigger: CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTC...TGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR GCA 90 bp AGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGAGACAGAGACAGAGGCTGCTGCTTaGTCAGAGGCCCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RHSETQGALPVTGRGETETEAAA*SEAPEQ
Trigger: CTGCTCTGGGGCCTCTGAGCAAGCAGCAGCCTCTGT...CTCTGTCTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp AGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGCCTGGGTGCCCCAGGTaGCCATTCAGTTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SGLGQRPPAPLPHTVPEGPGCPR*PFSSTS
Trigger: GCTGGTGGAACTGAATGGGCACCTGGGGCACCCAGG...CCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp ACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTGTGACCGCTGCGGAGTaGGTGGGGAGCAGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: TSSTSASPSWMTGASTIAVTAAE*VGSSGA
Trigger: TGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCAC...AGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR GCA 90 bp GCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGAGCACTCAGAAGGGCAGTaGTTGCTCAGGGATCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASRHSETQGALPVTGRGEHSEGQ*LLRDLQ
Trigger: CTGCAGATCCCTGAGCAAGCACTGCCCTTCTGAGTG...CTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp GCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCCACCCGGGTCGGGAGTaGAGGGGGCATTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ACSGICRQGRCQALTQFCHPGRE*RGHSSQ
Trigger: CTGGCTCGAATGCCCCCTCCACTCCCGACCCGGGTG...GCAGAACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp GGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGCGAACCTCCTCCTCGTaGATCTTCCTCAAGAACCGG +
Preference number: 4 (lower is better)
Translates to: GWAWESPKPSAQVQPASRRTSSS*IFLKNR
Trigger: CCGGTTCTTGAGGAAGATCCACGAGGAGGAGGTTCG...CCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp TTGCTGGACGCCATTGCCTCATACTGCGTGCGGATCTCTTTCAGGGCTGCGGTGCGGGCCAGCTGCTCCTaGAGTTCCCGAACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLDAIASYCVRISFRAAVRASCS*SSRTSS
Trigger: GGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCG...CACCGCAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CCA 90 bp TGCTGTCGGGCCAGCTGCTCCTGGAGTTCCCGAACCTCCTCCTCGTGGATCTTCACGTCAAGCTCCACATaGACCTGCTGTCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CCRASCSWSSRTSSSWIFTSSST*TCCRAS
Trigger: GCTGGCCCGACAGCAGGTCCATGTGGAGCTTGACGT...GAAGATCCACGAGGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376990.8
ENST00000585728.5
CDS-3UTR CCA 90 bp GAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGATCAGGTCTGCAAACTTaGAGCGGTACCACTCTTCGG +
Preference number: 4 (lower is better)
Translates to: ESLASRHSETQGALPVTGSGLQT*SGTTLR
Trigger: CCGAAGAGTGGTACCGCTCCAAGTTTGCAGACCTGA...TCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp CCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCAGTGGCCTCGAATCTGCAGGTTaGAGAAGGTCTGCACGGGAA +
Preference number: 4 (lower is better)
Translates to: PSGNGPPVTAAECVGSSGLESAG*RRSARE
Trigger: TTCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAG...GCCACTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp TCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGCACAGATGGCATCCCTaGATGGCAGCTCAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SSPPSGNGPPVTAAECVGHRWHP*MAAQVD
Trigger: GTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTG...CCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp AGGAGAACCCTGAAGTGGGCCCTCCCAGTCCCATCTCTGGGCACAGATCCCACCCCGGTCACTATGGGGTaGAGAGGGTCAGACGTGTGG +
Preference number: 4 (lower is better)
Translates to: RRTLKWALPVPSLGTDPTPVTMG*RGSDVW
Trigger: CCACACGTCTGACCCTCTCCACCCCATAGTGACCGG...GGTGGGATCTGTGCCCAGAGATGGGACTGGGAGGGCCCACTTCAGGGTTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp TTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGCCAGATGTCTCTGGGTaGGTACCCTCTCCATCCCGC +
Preference number: 4 (lower is better)
Translates to: FRAQSEDSGLYFCGTRKGPDVSG*VPSPSR
Trigger: GCGGGATGGAGAGGGTACCCACCCAGAGACATCTGG...CCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATCCAGATGTCTCTGGGTaGGTACCCTCTCCATCCCGC +
Preference number: 4 (lower is better)
Translates to: GKVPSHQLRSSQPPGWPDPDVSG*VPSPSR
Trigger: GCGGGATGGAGAGGGTACCCACCCAGAGACATCTGG...ATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCGGGTGTGACATCTCATaGGCACTACCCAGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: GLGKSQAISSGPASLPDGGCDIS*ALPSLV
Trigger: AACGAGGCTGGGTAGTGCCCATGAGATGTCACACCC...GCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp ATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCGGGTGTGCTAGTTGCTaGCTTCCGGCTGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ISLPEHLGPPFSFRFPLTGCASC*LPAGCD
Trigger: GTCACACCCAGCCGGAAGCCAGCAACTAGCACACCC...GGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GGGCGGGTGCTGACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCGGCATCTACTATTGCTaGAGGCAGGGTGTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: GRVLTEAAQVRVGSDMLTGIYYC*RQGVLV
Trigger: AACTAGCACACCCTGCCTCCAGCAATAGTAGATGCC...GGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGTCAGCACCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GAGGCAGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTTCCGCTTCACCCAGCTaGATGACCGGGGCATCTACT +
Preference number: 4 (lower is better)
Translates to: EAEISLPEHLGPPFSFRFSASPS*MTGAST
Trigger: AGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGA...AAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AGCAGAGACTGGGCCATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCTCCGCTTCACCCAGCTaGATGACCGGGGCATCTACT +
Preference number: 4 (lower is better)
Translates to: SRDWAMDSSSPVLGPGQSSASPS*MTGAST
Trigger: AGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGA...GCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACAGGCCGTGCCCGATGTaGTGTCTTGTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: DLPARAPRPALLIPVSFDRPCPM*CLVAQG
Trigger: CCCTTGAGCCACAAGACACCACATCGGGCACGGCCT...GTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CCACCAGCAGAGACTGGGCCATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCTGTGCAGGTTGGGCCTaGGAAAGTCCCAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: PPAETGPWTHHLLSWGPACAGWA*ESPKPS
Trigger: TGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA...GGCCGGGCCCCAGGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGCTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GTGAGGCTCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGGAACTCAGGGGGATTaGGAGGATGGGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: VRLTPCQAGQSAVSERQAGTQGD*EDGVGE
Trigger: CTCACCCACCCCATCCTCCCAATCCCCCTGAGTTCC...TGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGAGCCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp AGAGGCGGAGCAACTATCCTGCTTCTGCTCGGGCCCCTCATGAGACGGGGCAGAAGCTGCCTTGCGTGGTaGACAGAGGGGGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: RGGATILLLLGPLMRRGRSCLAW*TEGVVR
Trigger: TCTCACCACCCCCTCTGTCCACCACGCAAGGCAGCT...TCTGCCCCGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp AAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGGAGCATGCAGTGGCCTaGGACAAAGACCGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KPSAQVQPASRMARYAGGEHAVA*DKDRQH
Trigger: GTGCTGGCGGTCTTTGTCCCAGGCCACTGCATGCTC...CCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp ATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCGAGCATGCAGTGGCCTaGGACAAAGACCGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: ISLPEHLGPPFSFRFPLTEHAVA*DKDRQH
Trigger: GTGCTGGCGGTCTTTGTCCCAGGCCACTGCATGCTC...GGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp AGACTGGGCCATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCATGCAGAGCATGCAGTGGCCTaGGACAAAGACCGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RLGHGLIISCPGARPEHAEHAVA*DKDRQH
Trigger: GTGCTGGCGGTCTTTGTCCCAGGCCACTGCATGCTC...TGCATGCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATGGCCCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp TCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCAGTGGCGCATCCGGGAGGGCGTGCTaGCCATCATTAACTATGTGT +
Preference number: 4 (lower is better)
Translates to: SGNGPPVTAAECVGSSGASGRAC*PSLTMC
Trigger: ACACATAGTTAATGATGGCCAGCACGCCCTCCCGGA...TGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCCCGCTGCGGAGTGCGTaGGGAGCAGTGGCGCATCGG +
Preference number: 4 (lower is better)
Translates to: GSDMLTRFSIRMFSLLVFPLRSA*GAVAHR
Trigger: CCGATGCGCCACTGCTCCCCACGCACTCCGCAGCGG...GAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATACCACCTTCTGGGAATaGACCCCCTGTGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: GKVPSHQLRSSQPPGWPDTTFWE*TPCDRC
Trigger: GCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGT...ATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CTGACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCGTCTTCACCACCTTCTaGGAATGGACCCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LTEAAQVRVGSDMLTRFSVFTTF*EWTPCD
Trigger: GTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGAC...GCTGAAGCGGGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp AGCCTCAGGGATGAAAGAATAAAGCAGAGAGCCTGGCGTCCAGGCACAGCGAGAGCTGCCCGGGCTGCCTaGGACACCCCTAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SLRDERIKQRAWRPGTARAARAA*DTPRLG
Trigger: ACCCAGCCTAGGGGTGTCCCAGGCAGCCCGGGCAGC...TCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTATTCTTTCATCCCTGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR CAA 72 bp CGCCAGTGTTCTCAAGGCCGTGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCCAAGGAAGCTGCGGAC +
Preference number: 4 (lower is better)
Translates to: RQCSQGRARCGV*WLKGCAKEAAD
Trigger: GTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGAACACTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
CDS-3UTR TCA 90 bp CTTCTGCCTCACAGTGGCCAGGTCCTGTGCCAGATTGTCCCTCTCAACCTCCAGCACCATCATCTCCCCTaGGGAGACGTAGGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: LLPHSGQVLCQIVPLNLQHHHLP*GDVGAA
Trigger: CGCCGCTCCTACGTCTCCTCAGGGGAGATGATGGTG...CTGGAGGTTGAGAGGGACAATCTGGCACAGGACCTGGCCACTGTGAGGCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR TCA 90 bp TGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATCTGCACCATCATCTCCCCTaGGGAGACGTAGGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: CLRGRQLTASRRRSIYNLHHHLP*GDVGAA
Trigger: CGCCGCTCCTACGTCTCCTCAGGGGAGATGATGGTG...CAGATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR TCA 90 bp GAGCCCAGACCTCTCCCCACGCTACCTCAAGGCCGTGCCCGATGTGGTGTCTTGCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: EPRPLPTLPQGRARCGVLLEVAF*HRLGVQ
Trigger: CTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAG...CAAGACACCACATCGGGCACGGCCTTGAGGTAGCGTGGGGAGAGGTCTGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR TCA 90 bp CAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTTCCTCGTTCTCAGATCCTaGGACTCGCTCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QVQPASRMARYAGGWVSFLVLRS*DSLGCG
Trigger: TCCACAGCCGAGCGAGTCTCAGGATCTGAGAACGAG...GAAGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CGGACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACTCGTTCTCAGATCCTaGGACTCGCTCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RTKARDHTPEVLVRSCLVLVLRS*DSLGCG
Trigger: TCCACAGCCGAGCGAGTCTCAGGATCTGAGAACGAG...TACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCTCGTTCTCAGATCCTaGGACTCGCTCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: DLPARAPRPALLIPVSFDLVLRS*DSLGCG
Trigger: TCCACAGCCGAGCGAGTCTCAGGATCTGAGAACGAG...GTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GGGCATCTACTATTGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGGGGCTTCCGGCTGGGTGTaGCATCTCATGGGCACTACC +
Preference number: 4 (lower is better)
Translates to: GHLLLLEAGCASCWLPAGASGWV*HLMGTT
Trigger: GGTAGTGCCCATGAGATGTCACACCCAGCCGGAAGC...CCCAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAGTAGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp AGCAGAGACTGGGCCATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCCTTCACCCAGCTGGATaGCCGGGGCATCTACTATTG +
Preference number: 4 (lower is better)
Translates to: SRDWAMDSSSPVLGPGQSLHPAG*PGHLLL
Trigger: CAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAG...GCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR TCA 90 bp TCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SEDSGLYFCGTRKGDYFYQGPHA*GAGSEL
Trigger: CAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTG...GTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR TCA 90 bp AGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTCAGGGCCTGGAGCACTaGGGCAGAGATCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RPVLLRHPQGGLLLRLRCQGLEH*GRDLPA
Trigger: GGCAGGGAGATCTCTGCCTCAGTGCTCCAGGCCCTG...ACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp CGTCCTGGGCTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTGAGTCAGCACTGAGCTaGGCGATGGAGCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RPGLGTAVPGKMTQSRPFESALS*AMEPQG
Trigger: TCCCTGAGGCTCCATCGCTCAGCTCAGTGCTGACTC...AAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAGCCCAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp ACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTGCCTCCTGGGCCAGCCAGAGCCTaGCTGGGCCCAAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: TGHPQPLLVCLAPSQLPPGPARA*LGPNPS
Trigger: GGAGGGATTTGGGCCCAGTCAGGCTCTGGCTGGCCC...AGGAGGCAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR TCA 90 bp GAGGCAGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTACCGCACACAGTACCTaGAGGGTGTCAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: EAEISLPEHLGPPFSFRFTAHST*RVSTGP
Trigger: TGGACCTGTTGACACCCTTCAGGTACTGTGTGCGGT...AAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR TCA 90 bp AGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTAGTGCTGACGGACTTTaGTGGGCGGGTGCTGACGGA +
Preference number: 4 (lower is better)
Translates to: RDLPARAPRPALLIPVSFSADGL*WAGADG
Trigger: TCCGTCAGCACCCGCCCATCAAAGTCCGTCAGCACT...AAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp TTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGGGCCGACATGAGCTTTaGGCTTCCCTGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: FTTFWEWTPCDRCGVRGEGRHEL*ASLSLQ
Trigger: TTGCAGTGACAGGGAAGCTCAAAGCTCATGTCGGCC...CTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp GGGCGGGTGCTGACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCTTTCTAGGAGCCCTATaGGCCTTTAATGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GRVLTEAAQVRVGSDMLTFLGAL*AFNALV
Trigger: AACCAGGGCATTAAAGGCTCATAGGGCTCCTAGAAA...GGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGTCAGCACCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp GACCAGGGCCTAGCAGGACAGGGGCAGCTGCAAGCCCCACCTAGAAGTACCCTGGCCAGCGCCTTGTTTTaGTGTTCCAGGAAGCGAACC +
Preference number: 4 (lower is better)
Translates to: DQGLAGQGQLQAPPRSTLASALF*CSRKRT
Trigger: GGTTCGCTTCCTGGAACAGCAAAACAAGGCGCTGGC...CAGGGTACTTCTAGGTGGGGCTTGCAGCTGCCCCTGTCCTGCTAGGCCCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp GACTCGTTCGTGCCGCGCAGAGACTCCAGGTCGCAGGTCAAGGACTGCAACTGGAGCCTGGTAGACGTCTaGCAGCTTGGTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: DSFVPRRDSRSQVKDCNWSLVDV*QLGGLL
Trigger: AAGGAGCCCACCAAGCTGGCAGACGTCTACCAGGCT...CCAGTTGCAGTCCTTGACCTGCGACCTGGAGTCTCTGCGCGGCACGAACGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp TCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGTGGCCAGGTCCTGTaGCAGATTGTCCCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: SSPPSGNGPPVTAAECVGSGQVL*QIVPLN
Trigger: GTTGAGAGGGACAATCTGGCACAGGACCTGGCCACT...CCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp TGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATCTGTGCTGTCGGGCCAGCTaGTCCTGGAGTTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: CLRGRQLTASRRRSIYNLCCRAS*SWSSRT
Trigger: GGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCA...CAGATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp CTTCTGCCTCACAGTGGCCAGGTCCTGTGCCAGATTGTCCCTCTCAACCTCCAGAGCTCCACATGGACCTaGTGTCGGGCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLPHSGQVLCQIVPLNLQSSTWT*CRASCS
Trigger: GGAGCAGCTGGCCCGACAGCAGGTCCATGTGGAGCT...CTGGAGGTTGAGAGGGACAATCTGGCACAGGACCTGGCCACTGTGAGGCAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR GCA 90 bp TGCTGTCGGGCCAGCTGCTCCTGGAGTTCCCGAACCTCCTCCTCGTGGATCTTCGATCTCTTTCAGGGCTaGGGTGAGGTCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: CCRASCSWSSRTSSSWIFDLFQG*GEVWLG
Trigger: GCCAAGCCAGACCTCACCGCAGCCCTGAAAGAGATC...GAAGATCCACGAGGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376990.8
ENST00000585728.5
CDS-3UTR GCA 90 bp TCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGGTTGCTGGACGCCATTaGCTCATACTGCGTGCGGAT +
Preference number: 4 (lower is better)
Translates to: SSPPSGNGPPVTAAECVGVAGRH*LILRAD
Trigger: ATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAAC...CCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CTGCTACCTGCAGAGCCCAGACCTCTCCCCACGCTACCTCAAGGCCGTGCCCGACGGCTTCATGCATGTTaGTGGACGCCATTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LLPAEPRPLPTLPQGRARRLHAC*WTPLPH
Trigger: ATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCG...TCGGGCACGGCCTTGAGGTAGCGTGGGGAGAGGTCTGGGCTCTGCAGGTAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTGGAGCGTCTGTCAGGTCTaGAAACTTGGAGCGGTACCA +
Preference number: 4 (lower is better)
Translates to: GGAAPRCGQQRLSGLQTWSVCQV*KLGAVP
Trigger: TGGTACCGCTCCAAGTTTGCAGACCTGACAGACGCT...CCAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp TTGCTGGACGCCATTGCCTCATACTGCGTGCGGATCTCTTTCAGGGCTGCGGTGTCGTCCTTGAGGCTCTaGCCCTCTTCCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LLDAIASYCVRISFRAAVSSLRL*PSSSSR
Trigger: GCGGCTGGAGGAAGAGGGGCAGAGCCTCAAGGACGA...CACCGCAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp CTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTAGGGGAAGCTCGTCCTTGAGGCTCTaGCCCTCTTCCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LGTAVPGKMTQSRPFRGSSSLRL*PSSSSR
Trigger: GCGGCTGGAGGAAGAGGGGCAGAGCCTCAAGGACGA...GCTTCCCCTAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp CCACCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTGCACTGGGGTATCTGGGCAGGTGACTaGCCCAGGTGGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: PPVCSPVCSVKAEWVHWGIWAGD*PRWQDV
Trigger: GACGTCCTGCCACCTGGGGCAGTCACCTGCCCAGAT...ACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp GGGCATCTACTATTGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGGGGCAGGGTGTGCTAGTTaGTGGCTTCCGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GHLLLLEAGCASCWLPAGAGCAS*WLPAGC
Trigger: ACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGC...CCCAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAGTAGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp ATCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGACTGTGCCAAGGAAGCTaGGGACCAAGGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: IPQVDERLFHQAGRAGPGLCQGS*GPRPGT
Trigger: GGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAG...TCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGAGGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCA +
Preference number: 4 (lower is better)
Translates to: SPRLMKDFSTRLAGQGLEVAQGL*QGSCGP
Trigger: TGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCAC...CTCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCAGGCAGAGATCTCCCTaGCCGAGCACCTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AVELTLIGYLLITAVFVTRQRSP*PSTSAR
Trigger: GCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCT...GGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGGAGACTCAGTTCTTGTaGAGGTTGGGCCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GWAWESPKPSAQVQPASRETQFL*RLGLGK
Trigger: CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTC...CCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GCAGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTCCATCCGGGAGGGCGTaGTGGCCATCATTAACTATG +
Preference number: 4 (lower is better)
Translates to: AEISLPEHLGPPFSFRFPPSGRA*WPSLTM
Trigger: CATAGTTAATGATGGCCAGCACGCCCTCCCGGATGG...AGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp AGACTGGGCCATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCATGCAGCTACCTCAAGGCCGTaGCCGATGTGGTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: RLGHGLIISCPGARPEHAATSRP*PMWCLV
Trigger: CACAAGACACCACATCGGGCACGGCCTTGAGGTAGC...TGCATGCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATGGCCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR GCA 90 bp GCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACGCTACCTCAAGGCCGTaGCCGATGTGGTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: AQSEDSGLYFCGTRKGDYATSRP*PMWCLV
Trigger: CACAAGACACCACATCGGGCACGGCCTTGAGGTAGC...GTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp GTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGTCAGGCCTGTACTTCTaGGGCACCCGCAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: VPTDGIPGWQLRWTETLESGLYF*GTRKGD
Trigger: GTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGA...CTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp AGCAGAGACTGGGCCATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCGAGCTTCCCTGTCACTaGAAACCCGAAGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SRDWAMDSSSPVLGPGQSELPCH*KPEEVP
Trigger: TGGCACCTCTTCGGGTTTGCAGTGACAGGGAAGCTC...GCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR GCA 90 bp ATAAAGCAGAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGAGAGCTGGATCCCTTTaGCCTGATCCTCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: IKQRAWRPGTARPKGPSQRAGSL*PDPQSQ
Trigger: CTGGGACTGAGGATCAGGGCAAAGGGATCCAGCTCT...CTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp TCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGAGACACAGGACAGGGGCAGCTaGAAGCCCCACCTAGAAGTA +
Preference number: 4 (lower is better)
Translates to: SRHSETQGALPVTGRGETQDRGS*KPHLEV
Trigger: TACTTCTAGGTGGGGCTTGCAGCTGCCCCTGTCCTG...TGTCTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp AGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGAGACAGAGGCTCTCACCCAGTTCTaGTGTCGAATGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RHSETQGALPVTGRGETEALTQF*CRMGCR
Trigger: CCTGCACCCCATTCGACAGCAGAACTGGGTGAGAGC...CTCTGTCTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp GCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCGTGCTGGTTCGGAGCTaGTTAGTACCCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: AQVQPASRMARYAGGWVSVLVRS*LVPSPS
Trigger: GGATGGAGAGGGTACTAAGCAGCTCCGAACCAGCAC...GGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639277.1
CDS-3UTR CCA 90 bp TCGGCTTCATGCATGTTGCTGGACGCCATTGCCTCATACTGCGTGCGGATCTCTCACCCGGGTCGGGAGTaGAGGGGGCATTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SASCMLLDAIASYCVRISHPGRE*RGHSSQ
Trigger: CTGGCTCGAATGCCCCCTCCACTCCCGACCCGGGTG...AGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CCA 90 bp TTGCTGGACGCCATTGCCTCATACTGCGTGCGGATCTCTTTCAGGGCTGCGGTGGCTTGGTGGGCTCCTTaGCCCGCAGCTGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLDAIASYCVRISFRAAVAWWAP*PAAGSA
Trigger: AGCTGAACCAGCTGCGGGCCAAGGAGCCCACCAAGC...CACCGCAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CCA 90 bp GAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGGCTTGGTGGGCTCCTTaGCCCGCAGCTGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: EHLGPPFSFRFPLTHSWVAWWAP*PAAGSA
Trigger: AGCTGAACCAGCTGCGGGCCAAGGAGCCCACCAAGC...CACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp GCCAGGTTGTTCTCGGCTTCCAGCCTCAGGTTGGTTTCATCCTGGAGCTTCTGCCGGGCCAGCTGCTCCTaGAGTTCCCGAACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ARLFSASSLRLVSSWSFCRASCS*SSRTSS
Trigger: GGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCG...GCAGAAGCTCCAGGATGAAACCAACCTGAGGCTGGAAGCCGAGAACAACCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR CCA 90 bp GCTTCTGCCTCACAGTGGCCAGGTCCTGTGCCAGATTGTCCCTCTCAACCTCCAGGCTGCGGTGAGGTCTaGCTTGGCCACGTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: ASASQWPGPVPDCPSQPPGCGEV*LGHVKL
Trigger: GAGCTTGACGTGGCCAAGCCAGACCTCACCGCAGCC...TGGAGGTTGAGAGGGACAATCTGGCACAGGACCTGGCCACTGTGAGGCAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR CCA 90 bp AGAGCAGCTCCACTGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCGCGCCTCCTGATAACTaGCCGCCTCCCGCACGTGCC +
Preference number: 4 (lower is better)
Translates to: RAAPLRTQGLTTFTTNKLAPPDN*PPPARA
Trigger: GGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGC...GAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCAGTGGAGCTGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp CCACGTACACAACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTGCCCACGGAGTTGCTGGGTGCTaGGTGGGTGCCGTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PRTQQIPQVLRIKLPPAHGVAGC*VGAVWQ
Trigger: CTGCCAGACGGCACCCACCCAGCACCCAGCAACTCC...GTGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGTTGTGTACGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp AGAGGCGGAGCAACTATCCTGCTTCTGCTCGGGCCCCTCATGAGACGGGGCAGAGATGGCATCCCTGGATaGCAGCTCAGGTGGACTGAG +
Preference number: 4 (lower is better)
Translates to: RGGATILLLLGPLMRRGRDGIPG*QLRWTE
Trigger: CTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATC...TCTGCCCCGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp ACCTGCCCACAGCGTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACAGAGGGTCAGACGTGTaGCAGTGGCTTACTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TCPQRAHRWHPWMAAQVDRGSDV*QWLTGV
Trigger: AACCCCAGTAAGCCACTGCCACACGTCTGACCCTCT...GTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCACGCTGTGGGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp AGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTCAAGGCCCCAGATGTCTCTGGGTaGGTACCCTCTCCATCCCGC +
Preference number: 4 (lower is better)
Translates to: RPVLLRHPQGGLLLRLKAPDVSG*VPSPSR
Trigger: GCGGGATGGAGAGGGTACCCACCCAGAGACATCTGG...GGCCTTGAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640859.1
CDS-3UTR CCA 90 bp TCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGAGGGGTGTGCTAGTTGCTaGCTTCCGGCTGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: SPRLMKDFSTRLAGQGLEGCASC*LPAGCD
Trigger: GTCACACCCAGCCGGAAGCCAGCAACTAGCACACCC...CTCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CCAGAGCATGCAGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTCCGCTTCACCCAGCTaGATGACCGGGGCATCTACT +
Preference number: 4 (lower is better)
Translates to: PEHAVAWDKDRQHLYRTQSASPS*MTGAST
Trigger: AGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGA...CTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACTGCATGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTTCTCCGCTTCACCCAGCTaGATGACCGGGGCATCTACT +
Preference number: 4 (lower is better)
Translates to: QVQPASRMARYAGGWVSFSASPS*MTGAST
Trigger: AGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGA...GAAGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp TCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGTCCGCTTCACCCAGCTaGATGACCGGGGCATCTACT +
Preference number: 4 (lower is better)
Translates to: SQAISSGPASLPDGQICRSASPS*MTGAST
Trigger: AGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGA...CCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTAGGCCGTGCCCGATGTaGTGTCTTGTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: RDLPARAPRPALLIPVSFRPCPM*CLVAQG
Trigger: CCCTTGAGCCACAAGACACCACATCGGGCACGGCCT...AAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTGGAGGCAGGGTGTGAGGCCGTGCCCGATGTaGTGTCTTGTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: RFTQLDDRGIYYCWRQGVRPCPM*CLVAQG
Trigger: CCCTTGAGCCACAAGACACCACATCGGGCACGGCCT...CACACCCTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCCTTTGACCCATTCTTaGGTGAGCGCCAGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GLGKSQAISSGPASLPDGPLTHS*VSASVL
Trigger: GAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGG...GCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR CCA 90 bp TCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGAGAGCCAGCCTCCCGGATaGCCAGATATGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SPRLMKDFSTRLAGQGLESQPPG*PDMQEG
Trigger: ACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCT...CTCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTGTGCAGGTTGGGCCTaGGAAAGTCCCAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: AQVQPASRMARYAGGWVSCAGWA*ESPKPS
Trigger: TGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA...GGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CAGAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGGTGGTTGGAGTGGCGTaGCGGATACGCCAAATCCCC +
Preference number: 4 (lower is better)
Translates to: QRPPGGSCLTSHPCAPAWVVGVA*RIRQIP
Trigger: GGGGATTTGGCGTATCCGCCACGCCACTCCAACCAC...CCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp CCCACTGTGGTTGGAGTGGCGTGGCGGATACGCCAAATCCCCTCTTCCCATTCCAGCTCCCACTGTGGTTaGAGTGGCGTGGCGGATACG +
Preference number: 4 (lower is better)
Translates to: PTVVGVAWRIRQIPSSHSSSHCG*SGVADT
Trigger: CGTATCCGCCACGCCACTCCAACCACAGTGGGAGCT...GGAATGGGAAGAGGGGATTTGGCGTATCCGCCACGCCACTCCAACCACAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp CGCTCGGCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTGCGTGGGGAGCAGTaGCGCATCGGCCTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: RSAVELTLIGYLLITAVFVRGEQ*RIGLCY
Trigger: GTAGCAGAGGCCGATGCGCCACTGCTCCCCACGCAC...AAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGCCGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR CAA 72 bp GAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGCGCCAGTGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: EHLGPPFSFRFP*THSWVSASVLA
Trigger: GGCCAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp AGCTCCGCGTTGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTGGAGCGGTACTGGCAAAGCGGTCATTaGGCTCCATCATCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSALRAAASVRSANLERYWQSGH*APSSLP
Trigger: GGGCAGAGATGATGGAGCTCAATGACCGCTTTGCCA...GTACCGCTCCAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR TCA 90 bp TGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: CRLGLGKSQAISSGPASLLEVAF*HRLGVQ
Trigger: CTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAG...GAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR TCA 90 bp CGGACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: RTKARDHTPEVLVRSCLVPRCSS*GGLLTQ
Trigger: CTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGG...TACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTCCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: LRSSQPPGWPDMQEGGFPPRCSS*GGLLTQ
Trigger: CTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGG...AGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGAGATCCCCCAAGTGCTaGGAATCAAGCTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: GTSMSSPPSGNGPPVTAARSPKC*ESSSHL
Trigger: CAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCT...CGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp CCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCAGTGGCAGCTCTCTTCAGCTCTaGAGACCAGTTGTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: PSGNGPPVTAAECVGSSGSSLQL*RPVVLQ
Trigger: TTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCT...GCCACTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp CATCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTGGCTTCCGGCTGGGTGTaGCATCTCATGGGCACTACC +
Preference number: 4 (lower is better)
Translates to: HLMGTTQPRSQILRLARLASGWV*HLMGTT
Trigger: GGTAGTGCCCATGAGATGTCACACCCAGCCGGAAGC...CAGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp TCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGCTTCACCCAGCTGGATaGCCGGGGCATCTACTATTG +
Preference number: 4 (lower is better)
Translates to: SQAISSGPASLPDGQICRLHPAG*PGHLLL
Trigger: CAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAG...CCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AVELTLIGYLLITAVFVTQGPHA*GAGSEL
Trigger: CAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTG...GGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PRDSVLVQVGPGKVPSHQQGPHA*GAGSEL
Trigger: CAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTG...CTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GGCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCAGGGCCTGGAGCACTaGGGCAGAGATCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GCGAHPDRLPAHHSSLCHQGLEH*GRDLPA
Trigger: GGCAGGGAGATCTCTGCCTCAGTGCTCCAGGCCCTG...GTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATGAACTGAGTCAGCACTaGGCTGAGCGATGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PCLRGRQLTASRRRSIYNELSQH*AERWSL
Trigger: GAGGCTCCATCGCTCAGCTCAGTGCTGACTCAGTTC...ATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp GCAGCCAGGTTGTTCTCGGCTTCCAGCCTCAGGTTGGTTTCATCCTGGAGCTTCCAGCTCAGCCAGCATTaGGTGCCCCAGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: AARLFSASSLRLVSSWSFQLSQH*VPQPGR
Trigger: TCTCCCTGGCTGGGGCACTCAATGCTGGCTGAGCTG...GAAGCTCCAGGATGAAACCAACCTGAGGCTGGAAGCCGAGAACAACCTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR TCA 90 bp GGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATACCGCACACAGTACCTaGAGGGTGTCAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GKVPSHQLRSSQPPGWPDTAHST*RVSTGP
Trigger: TGGACCTGTTGACACCCTTCAGGTACTGTGTGCGGT...ATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR TCA 90 bp GACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTGGAATGGACCCCCTGTaGCCGCTGCGGAGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: DMLTRFSIRMFSLLVFRAGMDPL*PLRSAW
Trigger: CCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCC...AGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR TCA 90 bp TCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTGGAATGGACCCCCTGTaGCCGCTGCGGAGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: SACSACWFSGLSLRTQACGMDPL*PLRSAW
Trigger: CCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCC...ACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR TCA 90 bp CTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGAGTGCTGACGGACTTTaGTGGGCGGGTGCTGACGGA +
Preference number: 4 (lower is better)
Translates to: LRTQACTSAAPARGTTFTSADGL*WAGADG
Trigger: TCCGTCAGCACCCGCCCATCAAAGTCCGTCAGCACT...CGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CATCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTGGCCACACCAAAGTGCTaGCGGACTTTGATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: HLMGTTQPRSQILRLARLATPKC*RTLMGG
Trigger: CCCGCCCATCAAAGTCCGTCAGCACTTTGGTGTGGC...CAGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATAAGCCTGGTAGACGTCTaGCAGCTTGGTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GKSQAISSGPASLPDGQISLVDV*QLGGLL
Trigger: AAGGAGCCCACCAAGCTGGCAGACGTCTACCAGGCT...TATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp GGGCTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTAGGGGATCATCCTGGAGCTTCTaGCTCACAGTGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GLGTAVPGKMTQSRPFRGSSWSF*LTVARS
Trigger: GGACCTGGCCACTGTGAGGCAGAAGCTCCAGGATGA...TCCCCTAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp TCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCCACTCTTCGGCTTCATaGATGTTGCTGGACGCCATT +
Preference number: 4 (lower is better)
Translates to: SPPSGNGPPVTAAECVGSHSSAS*MLLDAI
Trigger: AATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTG...GCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp AACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTCGTCCTTGAGGCTCTaGCCCTCTTCCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: NQLHIRFTQLDDRGIYYCSSLRL*PSSSSR
Trigger: GCGGCTGGAGGAAGAGGGGCAGAGCCTCAAGGACGA...GCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATAGGTTGGAGAAGGTCTaGACGGGAATGGTGATCCGG +
Preference number: 4 (lower is better)
Translates to: GKVPSHQLRSSQPPGWPDRLEKV*TGMVIR
Trigger: CCGGATCACCATTCCCGTGCAGACCTTCTCCAACCT...ATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639042.1
ENST00000639277.1
CDS-3UTR GCA 90 bp CCACCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTGCACTGGGGTGCGGAGCAACTATCCTaGTTCTGCTCGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: PPVCSPVCSVKAEWVHWGAEQLS*FCSGPS
Trigger: TGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGC...ACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp ATGCCTAGCGCCATCCCAATTGCCTCCTCCTCCATCTCTACCAGCGTCCCCTCCAGGTCTGGGGAAATGTaGCAGCAGAGGCGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: MPSAIPIASSSISTSVPSRSGEM*QQRRSN
Trigger: GTTGCTCCGCCTCTGCTGGCACATTTCCCCAGACCT...GGAGGGGACGCTGGTAGAGATGGAGGAGGAGGCAATTGGGATGGCGCTAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp CCTCCAGACTGCCCCTTGGGGGTGAGTTTCTTGTTAGTTGGAGTTGCTGGGTGCGTTGGAGTTGCTGGGTaGTGGGTGGGTGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: PPDCPLGVSFLLVGVAGCVGVAG*WVGAVW
Trigger: CCAGACGGCACCCACCCAGCACCCAGCAACTCCAAC...GCACCCAGCAACTCCAACTAACAAGAAACTCACCCCCAAGGGGCAGTCTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp GAGGCCAAGTGCAACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCGTTGGAGTTGCTGGGTaGTGGGTGGGTGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: EAKCNWSPTTPTCMPSAIVGVAG*WVGAVW
Trigger: CCAGACGGCACCCACCCAGCACCCAGCAACTCCAAC...GATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp CAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTTCCGGGGCATCTACTATTaGTGGAGGCAGGGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: QVQPASRMARYAGGWVSFRGIYY*WRQGVL
Trigger: TAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCG...GAAGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CGGACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACGGGGCATCTACTATTaGTGGAGGCAGGGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: RTKARDHTPEVLVRSCLVRGIYY*WRQGVL
Trigger: TAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCG...TACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAACTGTGCCAAGGAAGCTaGGGACCAAGGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: LGQRPPAPLPHTVPEGCQLCQGS*GPRPGT
Trigger: GGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAG...TTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp GTGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCTGTGCCAAGGAAGCTaGGGACCAAGGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: VFIDHGNQLHIRFTQLDDLCQGS*GPRPGT
Trigger: GGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAG...GTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCA +
Preference number: 4 (lower is better)
Translates to: ESPKPSAQVQPASRMARYVAQGL*QGSCGP
Trigger: TGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCAC...ATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CTATTGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGGGTGTGACATCGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCA +
Preference number: 4 (lower is better)
Translates to: LLLEAGCASCWLPAGCDIVAQGL*QGSCGP
Trigger: TGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCAC...GATGTCACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATGTGTTCTCAAGGCCGTaGCCGATGTGGTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: GKVPSHQLRSSQPPGWPDVFSRP*PMWCLV
Trigger: CACAAGACACCACATCGGGCACGGCCTTGAGAACAC...ATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR GCA 90 bp TGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATaGAGGAGGGTGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: CRLGLGKSQAISSGPASLPDGQI*RRVGFL
Trigger: AAGGAAACCCACCCTCCTGCATATCTGGCCATCCGG...GAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GACCCCAGGTCCACCACCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCTGGGAACCTTCTATGTaGCAGCCCCAGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: DPRSTTTRLCNLGKSPTSWEPSM*QPQAFL
Trigger: GAGGAAAGCCTGGGGCTGGCACATAGAAGGTTCCCA...GGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGGTGGTGGACCTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR GCA 90 bp AATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCAGTGGCGCATCGGCCAAATCTGTTACAGCCTaGTCCCCATTTTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: NGPPVTAAECVGSSGASAKSVTA*SPFSWA
Trigger: TGCCCATGAAAATGGGGAGCAGGCTGTAACAGATTT...GGCCGATGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp ATGAGGGTGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGCCTGGGTGCCCCAGGTaGCCATTCAGTTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: MRVFIDHGNQLHIRFTQLPGCPR*PFSSTS
Trigger: GCTGGTGGAACTGAATGGGCACCTGGGGCACCCAGG...CAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACACCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp GTGGACAAATCTGTTACAGCCTGCTCCCCATTTTCATGGGCAGGTCTGGGACCTGCAGCCGGCCCTGGGTaGCCCAGGTGCCCATTCAGT +
Preference number: 4 (lower is better)
Translates to: VDKSVTACSPFSWAGLGPAAGPG*PRCPFS
Trigger: ACTGAATGGGCACCTGGGGCACCCAGGGCCGGCTGC...AGGTCCCAGACCTGCCCATGAAAATGGGGAGCAGGCTGTAACAGATTTGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR GCA 90 bp ATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCCATCCGGGAGGGCGTaGTGGCCATCATTAACTATG +
Preference number: 4 (lower is better)
Translates to: ISLPEHLGPPFSFRFPLTPSGRA*WPSLTM
Trigger: CATAGTTAATGATGGCCAGCACGCCCTCCCGGATGG...GGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp AGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTTGGCGCATCGGCCTCTaGTACCTGCAGAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: RPVLLRHPQGGLLLRLRCWRIGL*YLQSPD
Trigger: GTCTGGGCTCTGCAGGTAGCAGAGGCCGATGCGCCA...ACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp TCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGTGACCGCTGCGGAGTaGGTGGGGAGCAGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: SACWFSGLSLRTQACTSAVTAAE*VGSSGA
Trigger: TGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCAC...CGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp AGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGTCAGGCCTGTACTTCTaGGGCACCCGCAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SSCAGWAWESPKPSAQVQSGLYF*GTRKGD
Trigger: GTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGA...CTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp ACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATCCTCAGGCCTGTACTTCTaGGGCACCCGCAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: TSAAPARGTTFTPTMWTSSGLYF*GTRKGD
Trigger: GTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGA...GGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp AACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTCAGGCCTGTACTTCTaGGGCACCCGCAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: NQLHIRFTQLDDRGIYYCSGLYF*GTRKGD
Trigger: GTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGA...GCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GGGCGGGTGCTGACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCGCTGCTTTTCCTGGCTaGATAATCCTTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: GRVLTEAAQVRVGSDMLTAAFPG*IILSSS
Trigger: AGATGAGGAAAGGATTATGCAGCCAGGAAAAGCAGC...GGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGTCAGCACCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp CAGGGCCTAGCAGGACAGGGGCAGCTGCAAGCCCCACCTAGAAGTACCCTGGTACTTCCCACGAGGCCCTaGTGTACTGACCTCGAATCT +
Preference number: 4 (lower is better)
Translates to: QGLAGQGQLQAPPRSTLVLPTRP*CTDLES
Trigger: AGATTCGAGGTCAGTACAGCAGGGCCTCGTGGGAAG...TACCAGGGTACTTCTAGGTGGGGCTTGCAGCTGCCCCTGTCCTGCTAGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp GACTCCAGTGCCCTTCCCACGAGGCCCTGCTGTACTGACCTCGAATCTGCAGGTGCTCTCACCCAGTTCTaGTGTCGAATGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: DSSALPTRPCCTDLESAGALTQF*CRMGCR
Trigger: CCTGCACCCCATTCGACAGCAGAACTGGGTGAGAGC...ACCTGCAGATTCGAGGTCAGTACAGCAGGGCCTCGTGGGAAGGGCACTGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS-3UTR GCA 90 bp TCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGAGACACAGAAGGGCAGTGCTTaGTCAGGGATCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: SRHSETQGALPVTGRGETQKGSA*SGICRQ
Trigger: CTGTCTGCAGATCCCTGAGCAAGCACTGCCCTTCTG...TGTCTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp GTGAGGCTCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCACCCCAGCAGCCAACGTaGTATCTGGAGTTCCAAACG +
Preference number: 4 (lower is better)
Translates to: VRLTPCQAGQSAVSERQAPQQPT*YLEFQT
Trigger: CGTTTGGAACTCCAGATAGCACGTTGGCTGCTGGGG...TGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGAGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS-3UTR CCA 90 bp AGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGGCTTGGTGGGCTCCTTaGCCCGCAGCTGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSCAGWAWESPKPSAQVQAWWAP*PAAGSA
Trigger: AGCTGAACCAGCTGCGGGCCAAGGAGCCCACCAAGC...CTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp TGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTAGACGTCTGCCAGCTTaGTGGGCTCCTTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: CGQRHADPLQHPHVQLVGRRLPA*WAPWPA
Trigger: TGCGGGCCAAGGAGCCCACCAAGCTGGCAGACGTCT...ACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp ATCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGACCAGACGGGCCAGGGTaGCTTCATCTGCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: IPQVDERLFHQAGRAGPGPDGPG*LHLLPV
Trigger: GACAGGAAGCAGATGAAGCCACCCTGGCCCGTCTGG...TCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp CTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCCGGGCCAGCTGCTCCTaGAGTTCCCGAACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LETQFLCRLGLGKSQAISRASCS*SSRTSS
Trigger: GGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCG...GCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp GCAGCTCCACTGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCGGCTGCGGTGAGGTCTaGCTTGGCCACGTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: AAPLRTQGLTTFTTNKLCGCGEV*LGHVKL
Trigger: GAGCTTGACGTGGCCAAGCCAGACCTCACCGCAGCC...GCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCAGTGGAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp GAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGCTTCGTGCTTGGCCTaGCGGAGCAGCTCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: ETQFLCRLGLGKSQAISSASCLA*RSSSAL
Trigger: CAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGC...TGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp TCACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGACGTTGGCTTCGTGCTTaGCCTGGCGGAGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: SLWGGEGQTCGSGLLGLRRWLRA*PGGAAP
Trigger: CGGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAACG...TCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp ATGCCTAGCGCCATCCCAATTGCCTCCTCCTCCATCTCTACCAGCGTCCCCTCCTCTAACGCAAGCTGCTaGCCATGCCCCTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: MPSAIPIASSSISTSVPSSNASC*PCPSRL
Trigger: CAGTCTGGAGGGGCATGGCCAGCAGCTTGCGTTAGA...GGAGGGGACGCTGGTAGAGATGGAGGAGGAGGCAATTGGGATGGCGCTAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp CGGACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTAAGAGGGTCAGACGTGTaGCAGTGGCTTACTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RTKARDHTPEVLVRSCLVRGSDV*QWLTGV
Trigger: AACCCCAGTAAGCCACTGCCACACGTCTGACCCTCT...TACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp TATGGGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCCCAGATGTCTCTGGGTaGGTACCCTCTCCATCCCGC +
Preference number: 4 (lower is better)
Translates to: YGHLHVFTTFWEWTPCDRPDVSG*VPSPSR
Trigger: GCGGGATGGAGAGGGTACCCACCCAGAGACATCTGG...GCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: QLRSSQPPGWPDMQEGGFRCGVL*LKGCAK
Trigger: CTTGGCACAGCCCTTGAGCCACAAGACACCACATCG...AAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp TCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SQAISSGPASLPDGQICRRCGVL*LKGCAK
Trigger: CTTGGCACAGCCCTTGAGCCACAAGACACCACATCG...CCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SSGPASLPDGQICRRVGFRCGVL*LKGCAK
Trigger: CTTGGCACAGCCCTTGAGCCACAAGACACCACATCG...GAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: KPSAQVQPASRMARYAGGRCGVL*LKGCAK
Trigger: CTTGGCACAGCCCTTGAGCCACAAGACACCACATCG...CCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGCCTTTGACCCATTCTTaGGTGAGCGCCAGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: HQLRSSQPPGWPDMQEGGPLTHS*VSASVL
Trigger: GAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGG...CCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR CCA 90 bp CCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGCCTTTGACCCATTCTTaGGTGAGCGCCAGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: PSAQVQPASRMARYAGGWPLTHS*VSASVL
Trigger: GAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGG...CCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR CCA 90 bp CCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGAGATATGCAGGAGGGTaGGTTTCCTTCATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PSAQVQPASRMARYAGGWRYAGG*VSFIPQ
Trigger: CTGGGGGATGAAGGAAACCCACCCTCCTGCATATCT...CCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTGTGCAGGTTGGGCCTaGGAAAGTCCCAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: AQSEDSGLYFCGTRKGDYCAGWA*ESPKPS
Trigger: TGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA...GTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGAGTTCTTGTGCAGGTTaGGCCTGGGAAAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: PSAQVQPASRMARYAGGWSSCAG*AWESPK
Trigger: CTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT...CCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp TCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGAGACAATAAAGCAGAGAGCCTaGCGTCCAGGCACAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SRHSETQGALPVTGRGETIKQRA*RPGTAR
Trigger: TCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTAT...TGTCTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp TCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGAATATGAGCCAGTGTCTTCACCAGCCAGAGCCTGACTaGGCCCAAATCCCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: SALSTRPPGCRNMSQCLHQPEPD*AQIPPY
Trigger: GTAAGGAGGGATTTGGGCCCAGTCAGGCTCTGGCTG...GTGAAGACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp AGAGGCGGAGCAACTATCCTGCTTCTGCTCGGGCCCCTCATGAGACGGGGCAGATCCTCCAGAATTCCCTaGGGAGCTACTGGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: RGGATILLLLGPLMRRGRSSRIP*GATGSC
Trigger: GCAACTCCCAGTAGCTCCCCAGGGAATTCTGGAGGA...TCTGCCCCGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp TGTGGTTGGAGTGGCGTGGCGGATACGCCAAATCCCCTCTTCCCATTCCCCTGGCCACTGTGGTTGGAGTaGCGTGGCGGATACGCCAAA +
Preference number: 4 (lower is better)
Translates to: CGWSGVADTPNPLFPFPWPLWLE*RGGYAK
Trigger: TTTGGCGTATCCGCCACGCCACTCCAACCACAGTGG...CCAGGGGAATGGGAAGAGGGGATTTGGCGTATCCGCCACGCCACTCCAACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp GGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGGGTGTATGTCCTCTTTaGCTGCGGGTGGAATTTGGT +
Preference number: 4 (lower is better)
Translates to: GWAWESPKPSAQVQPASRGVCPL*LRVEFG
Trigger: ACCAAATTCCACCCGCAGCCAAAGAGGACATACACC...CCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp GGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCAAGAGTGGAGGGAGCTaGTGTATGTCCTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GLGKSQAISSGPASLPDGKSGGS*CMSSLA
Trigger: AGCCAAAGAGGACATACACCAGCTCCCTCCACTCTT...GCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CCA 90 bp TCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCAGGCTGGTGGGAGATTaGGGACTGAGCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: SMSSPPSGNGPPVTAAECRLVGD*GLSSGW
Trigger: CCATCCTGAGCTCAGTCCCCAATCTCCCACCAGCCT...GCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp GCAGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTCCACCAGCAGAGACTaGGCCATGGACTCATCATCT +
Preference number: 4 (lower is better)
Translates to: AEISLPEHLGPPFSFRFPSTSRD*AMDSSS
Trigger: AGATGATGAGTCCATGGCCCAGTCTCTGCTGGTGGA...AGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCTCCACCAGCAGAGACTaGGCCATGGACTCATCATCT +
Preference number: 4 (lower is better)
Translates to: AGWAWESPKPSAQVQPASSTSRD*AMDSSS
Trigger: AGATGATGAGTCCATGGCCCAGTCTCTGCTGGTGGA...GGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp AGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTGCGTGGGGAGCAGTaGCGCATCGGCCTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: RLSSCAGWAWESPKPSAQVRGEQ*RIGLCY
Trigger: GTAGCAGAGGCCGATGCGCCACTGCTCCCCACGCAC...CTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GAGCCCAGACCTCTCCCCACGCTACCTCAAGGCCGTGCCCGATGTGGTGTCTTGACAGTGAGGGAATGGTaGCCACTTTCCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: EPRPLPTLPQGRARCGVLTVREW*PLSRTR
Trigger: CCTTGTCCTGGAAAGTGGCCACCATTCCCTCACTGT...CAAGACACCACATCGGGCACGGCCTTGAGGTAGCGTGGGGAGAGGTCTGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp TCCAGGACAAGGGCCAGGAGCCCTTTGCAGATGAATACTATGGGCACCTCCATGACCACTGTGCTCCTGTaGGCATGGGGGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SRTRARSPLQMNTMGTSMTTVLL*AWGLQA
Trigger: GGCCTGGAGCCCCCATGCCCACAGGAGCACAGTGGT...CATGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCTTGTCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp CCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATTCCTCAGTCCCAGTCTaGAGCAACCTACAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PCLRGRQLTASRRRSIYNSSVPV*SNLQAL
Trigger: CAGGGCCTGTAGGTTGCTCCAGACTGGGACTGAGGA...ATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR CAA 72 bp ACTTTTACGCCTCAAGGCCGTGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCCAAGGAAGCTGCGGAC +
Preference number: 4 (lower is better)
Translates to: TFTPQGRARCGV*WLKGCAKEAAD
Trigger: GTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGGCGTAAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640859.1
CDS-3UTR TCA 90 bp ATAGGCAGCCAGGTTGTTCTCGGCTTCCAGCCTCAGGTTGGTTTCATCCTGGAGCTTTCAGGGCTGCGGTaGGGTCTGGCTTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: IGSQVVLGFQPQVGFILELSGLR*GLAWPR
Trigger: ACGTGGCCAAGCCAGACCTCACCGCAGCCCTGAAAG...CTCCAGGATGAAACCAACCTGAGGCTGGAAGCCGAGAACAACCTGGCTGCCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR TCA 90 bp ACTGTGCTCCTGTGGGCATGGGGGCTCCAGGCCTTTGAAATTGTGGAGAAGGAAGGGCCATCTCGTCCTTaGGGCTCTGCCCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TVLLWAWGLQAFEIVEKEGPSRP*GSAPLP
Trigger: AGGAAGAGGGGCAGAGCCTCAAGGACGAGATGGCCC...TTCCTTCTCCACAATTTCAAAGGCCTGGAGCCCCCATGCCCACAGGAGCACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp CACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGACTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HLHVFTTFWEWTPCDRCGLEVAF*HRLGVQ
Trigger: CTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAG...TCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR TCA 90 bp TCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGAGCCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: SPRLMKDFSTRLAGQGLEPRCSS*GGLLTQ
Trigger: CTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGG...CTCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATCCAGAACAGCTTCCGGCTGGGTGTaGCATCTCATGGGCACTACC +
Preference number: 4 (lower is better)
Translates to: AAPARGTTFTPTMWTSRTASGWV*HLMGTT
Trigger: GGTAGTGCCCATGAGATGTCACACCCAGCCGGAAGC...TGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp AGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGCTTCCGGCTGGGTGTaGCATCTCATGGGCACTACC +
Preference number: 4 (lower is better)
Translates to: RPVLLRHPQGGLLLRLRCASGWV*HLMGTT
Trigger: GGTAGTGCCCATGAGATGTCACACCCAGCCGGAAGC...ACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp GCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCCTTCACCCAGCTGGATaGCCGGGGCATCTACTATTG +
Preference number: 4 (lower is better)
Translates to: AWDKDRQHLYRTQYLKGVLHPAG*PGHLLL
Trigger: CAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAG...GACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR TCA 90 bp AAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCCATGAGGGTGTTCATTaGCCACGGCAACCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KSQAISSGPASLPDGQICHEGVH*PRQPAP
Trigger: TGGAGCTGGTTGCCGTGGTCAATGAACACCCTCATG...GCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GTCTGGTTCTACCAAAAGCACCTAGGTAGCAGCCACACCAAAGTGCTGACGGACCAGGGCCTGGAGCACTaGGGCAGAGATCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VWFYQKHLGSSHTKVLTDQGLEH*GRDLPA
Trigger: GGCAGGGAGATCTCTGCCTCAGTGCTCCAGGCCCTG...GTCCGTCAGCACTTTGGTGTGGCTGCTACCTAGGTGCTTTTGGTAGAACCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACCAGGGCCTGGAGCACTaGGGCAGAGATCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RFSIRMFSLLVFRAQSEDQGLEH*GRDLPA
Trigger: GGCAGGGAGATCTCTGCCTCAGTGCTCCAGGCCCTG...GTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp AAGCCCCACCTAGAAGTACCCTGGTATGATAGGCTCTGGCTAGGAGCGCTGCAGAAGGGGCCCTCCCAGTaGCAGGAAGAGGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: KPHLEVPWYDRLWLGALQKGPSQ*QEEVRQ
Trigger: CTGTCTCACCTCTTCCTGTCACTGGGAGGGCCCCTT...CTGCAGCGCTCCTAGCCAGAGCCTATCATACCAGGGTACTTCTAGGTGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS-3UTR TCA 90 bp GGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATGAAGATTGTGCTGGTTaGGTTGCAGGTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GKVPSHQLRSSQPPGWPDEDCAG*VAGSRE
Trigger: CTCCCTGCTACCTGCAACTCAACCAGCACAATCTTC...ATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR TCA 90 bp AGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGACCGCACACAGTACCTaGAGGGTGTCAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SGLGQRPPAPLPHTVPEGTAHST*RVSTGP
Trigger: TGGACCTGTTGACACCCTTCAGGTACTGTGTGCGGT...CCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR TCA 90 bp GCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACGGAGCCCTTTGCAGATaGATACTATGGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: AQSEDSGLYFCGTRKGDYGALCR*ILWAPP
Trigger: TGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCC...GTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR TCA 90 bp GCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACGGACATCCAGAACAGTaGGGGAATGGTGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: AQSEDSGLYFCGTRKGDYGHPEQ*GNGGHF
Trigger: AAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCC...GTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR TCA 90 bp CCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAAAGTGGGCAGCCCCTACCTGGCCGACATaGGCTTTGAGCTTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: PSGRACWPSLTMCPKWAAPTWPT*ALSFPV
Trigger: GACAGGGAAGCTCAAAGCTCATGTCGGCCAGGTAGG...GGCTGCCCACTTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR TCA 90 bp TCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATCTGGTGAGGCCCTGCTGTACTaGCCTCGAATCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SERQAANREPAAFHLQSGEALLY*PRICRL
Trigger: CAACCTGCAGATTCGAGGTCAGTACAGCAGGGCCTC...ACCAGATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp CTGGACGCCATTGCCTCATACTGCGTGCGGATCTCTTTCAGGGCTGCGGTGAGGGAAGCCAGCATTGAGTaGCCCAGCCAGGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: LDAIASYCVRISFRAAVREASIE*PSQGEI
Trigger: GATTTCTCCCTGGCTGGGGCACTCAATGCTGGCTTC...CCTCACCGCAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp AGGGCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGCCTGGTAGACGTCTaGCAGCTTGGTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RAVLAQGSADRADVKLSPSLVDV*QLGGLL
Trigger: AAGGAGCCCACCAAGCTGGCAGACGTCTACCAGGCT...GGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp GCTTCTGCCTCACAGTGGCCAGGTCCTGTGCCAGATTGTCCCTCTCAACCTCCATCATCCTGGAGCTTCTaGCTCACAGTGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ASASQWPGPVPDCPSQPPSSWSF*LTVARS
Trigger: GGACCTGGCCACTGTGAGGCAGAAGCTCCAGGATGA...TGGAGGTTGAGAGGGACAATCTGGCACAGGACCTGGCCACTGTGAGGCAGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR GCA 90 bp TGCTGTCGGGCCAGCTGCTCCTGGAGTTCCCGAACCTCCTCCTCGTGGATCTTCCGGCTTCATGCATGTTaGTGGACGCCATTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: CCRASCSWSSRTSSSWIFRLHAC*WTPLPH
Trigger: ATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCG...GAAGATCCACGAGGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp CCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGACGGCTTCATGCATGTTaGTGGACGCCATTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: PKPSAQVQPASRMARYAGRLHAC*WTPLPH
Trigger: ATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCG...TCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp GACCAGGGCCTAGCAGGACAGGGGCAGCTGCAAGCCCCACCTAGAAGTACCCTGCACTCTTCGGCTTCATaGATGTTGCTGGACGCCATT +
Preference number: 4 (lower is better)
Translates to: DQGLAGQGQLQAPPRSTLHSSAS*MLLDAI
Trigger: AATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTG...CAGGGTACTTCTAGGTGGGGCTTGCAGCTGCCCCTGTCCTGCTAGGCCCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp GGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATAGCGTCTGTCAGGTCTaGAAACTTGGAGCGGTACCA +
Preference number: 4 (lower is better)
Translates to: GKVPSHQLRSSQPPGWPDSVCQV*KLGAVP
Trigger: TGGTACCGCTCCAAGTTTGCAGACCTGACAGACGCT...ATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp AAAGCAGAGTGGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCCACATCACATCCTTGTaGTCCTGCTTGGACTCCTTA +
Preference number: 4 (lower is better)
Translates to: KAEWVHWGGRVSPEHPASHITSL*SCLDSL
Trigger: TAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTG...GGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCCACTCTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp GTTAGTTGGAGTTGCTGGGTGCTGGGTGGGTGCCGTCTGGCAGGCCTGATACTGCCACCAGGTGGGTCCTaGCTCACATCACATCCTTGT +
Preference number: 4 (lower is better)
Translates to: VSWSCWVLGGCRLAGLILPPGGS*LTSHPC
Trigger: ACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGG...CAGTATCAGGCCTGCCAGACGGCACCCACCCAGCACCCAGCAACTCCAACTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp TCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAAAGTGGGCAGCCGGCCCACCAGGTGGGTCCTaGCTCACATCACATCCTTGT +
Preference number: 4 (lower is better)
Translates to: SGRACWPSLTMCPKWAAGPPGGS*LTSHPC
Trigger: ACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGG...GCCGGCTGCCCACTTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp TGTGGTTGGAGTGGCGTGGCGGATACGCCAAATCCCCTCTTCCCATTCCCCTGGCCACCAGGTGGGTCCTaGCTCACATCACATCCTTGT +
Preference number: 4 (lower is better)
Translates to: CGWSGVADTPNPLFPFPWPPGGS*LTSHPC
Trigger: ACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGG...CCAGGGGAATGGGAAGAGGGGATTTGGCGTATCCGCCACGCCACTCCAACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR GCA 90 bp CCACGTACACAACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTGCCCACCATGCCCCTCCAGACTaGCCCTTGGGGGTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PRTQQIPQVLRIKLPPAHHAPPD*PLGVSF
Trigger: GAAACTCACCCCCAAGGGGCAGTCTGGAGGGGCATG...GTGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGTTGTGTACGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp TCACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGACTGTGCCAAGGAAGCTaGGGACCAAGGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: SLWGGEGQTCGSGLLGLRLCQGS*GPRPGT
Trigger: GGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAG...TCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGAGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCA +
Preference number: 4 (lower is better)
Translates to: PVLLRHPQGGLLLRLRCGVAQGL*QGSCGP
Trigger: TGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCAC...TCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp GGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATACCGGATGGCCAGATATaGAGGAGGGTGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GKSQAISSGPASLPDGQIPDGQI*RRVGFL
Trigger: AAGGAAACCCACCCTCCTGCATATCTGGCCATCCGG...TATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp ACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACCCGAGACTCAGTTCTTGTaGAGGTTGGGCCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: TKARDHTPEVLVRSCLVPETQFL*RLGLGK
Trigger: CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTC...GGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCATGCAGTGGCCTGGCTGGTTTCTCGAATCTaGAGGTTGGAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: HGLIISCPGARPEHAVAWLVSRI*RLEKVC
Trigger: GCAGACCTTCTCCAACCTGCAGATTCGAGAAACCAG...CCAGGCCACTGCATGCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp CTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCCCTGGGTGCCCCAGGTaGCCATTCAGTTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LETQFLCRLGLGKSQAISPGCPR*PFSSTS
Trigger: GCTGGTGGAACTGAATGGGCACCTGGGGCACCCAGG...GCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
CDS-3UTR GCA 90 bp TCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAAAGTGGGCAGCCGGCCCATCCGGGAGGGCGTaGTGGCCATCATTAACTATG +
Preference number: 4 (lower is better)
Translates to: SGRACWPSLTMCPKWAAGPSGRA*WPSLTM
Trigger: CATAGTTAATGATGGCCAGCACGCCCTCCCGGATGG...GCCGGCTGCCCACTTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp TACTATGGGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACTCGGCCTCTGCTACCTaGAGAGCCCAGACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: YYGHLHVFTTFWEWTPCDSASAT*RAQTSP
Trigger: GGGAGAGGTCTGGGCTCTGCAGGTAGCAGAGGCCGA...GTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp AGGGGGACTACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGACCCCCTGTGACCGCTaGGGAGTGCGTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RGTTFTPTMWTSRTVREWTPCDR*GVRGEQ
Trigger: CTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGT...CCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp GGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATAGAGCTTCCCTGTCACTaGAAACCCGAAGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GKSQAISSGPASLPDGQIELPCH*KPEEVP
Trigger: TGGCACCTCTTCGGGTTTGCAGTGACAGGGAAGCTC...TATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GAGCGGTACCACTCTTCGGCTTCATGCATGTTGCTGGACGCCATTGCCTCATACAGACGTCTGCCAGCTTaGTGGGCTCCTTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: ERYHSSASCMLLDAIASYRRLPA*WAPWPA
Trigger: TGCGGGCCAAGGAGCCCACCAAGCTGGCAGACGTCT...GTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTGGTACCGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CCA 90 bp CCACGTACACAACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTGCCCACGCAGAGGCCACCAGGTaGGTCCTGCCTCACATCACA +
Preference number: 4 (lower is better)
Translates to: PRTQQIPQVLRIKLPPAHAEATR*VLPHIT
Trigger: TGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTGC...GTGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGTTGTGTACGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp AGGACACCAAGTCTTGGGGAGAGGGAAGGACCCTTCTTCGGCCTTAGAGGGGAGCACAGGAGGCTGAGGTaGGTAGACTGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RTPSLGEREGPFFGLRGEHRRLR*VDCLSP
Trigger: TGGGCTCAAGCAGTCTACCCACCTCAGCCTCCTGTG...CTCCCCTCTAAGGCCGAAGAAGGGTCCTTCCCTCTCCCCAAGACTTGGTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp AGCAACTATCCTGCTTCTGCTCGGGCCCCTCATGAGACGGGGCAGAGGCCACCAAACAACCCTCTGAGCTaGGCATGGTGGCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: SNYPASARAPHETGQRPPNNPLS*AWWLQS
Trigger: AGATTGGAGCCACCATGCCCAGCTCAGAGGGTTGTT...TGGTGGCCTCTGCCCCGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp CTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCAACAGGTCCTTCTGGGATCTaGGCAGGTGACTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLGLLNDLQGTGNVHSATGPSGI*AGDCPR
Trigger: CCTGGGGCAGTCACCTGCCCAGATCCCAGAAGGACC...TGTTGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp CCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGTCATCGCTCAGGAGGTCCCACAGATGGCATCCCTaGATGGCAGCTCAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PGWQLRWTETLESSLRRSHRWHP*MAAQVD
Trigger: GTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTG...GGACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp GCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCGCAGAGTGGGTGCACTaGGGTGGACGTGTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: AVELTLIGYLLITAVFVTAEWVH*GGRVSP
Trigger: AGGGCTGACACGTCCACCCCAGTGCACCCACTCTGC...GGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp GCAGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGGTGTGACATCTCATaGGCACTACCCAGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: AVAWDKDRQHLYRTQYLKGCDIS*ALPSLV
Trigger: AACGAGGCTGGGTAGTGCCCATGAGATGTCACACCC...CTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATAGGGTGTGACATCTCATaGGCACTACCCAGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: GKSQAISSGPASLPDGQIGCDIS*ALPSLV
Trigger: AACGAGGCTGGGTAGTGCCCATGAGATGTCACACCC...TATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGCATCTACTATTGCTaGAGGCAGGGTGTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: QVGPGKVPSHQLRSSQPPGIYYC*RQGVLV
Trigger: AACTAGCACACCCTGCCTCCAGCAATAGTAGATGCC...GGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AGCAGAGACTGGGCCATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCGGCATCTACTATTGCTaGAGGCAGGGTGTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: SRDWAMDSSSPVLGPGQSGIYYC*RQGVLV
Trigger: AACTAGCACACCCTGCCTCCAGCAATAGTAGATGCC...GCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGCATCTACTATTGCTaGAGGCAGGGTGTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: AISSGPASLPDGQICRRVGIYYC*RQGVLV
Trigger: AACTAGCACACCCTGCCTCCAGCAATAGTAGATGCC...CACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACAGGCCGTGCCCGATGTaGTGTCTTGTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LYFCGTRKGDYFYAYDVDRPCPM*CLVAQG
Trigger: CCCTTGAGCCACAAGACACCACATCGGGCACGGCCT...GTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGAGGCCGTGCCCGATGTaGTGTCTTGTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: DSVLVQVGPGKVPSHQLRRPCPM*CLVAQG
Trigger: CCCTTGAGCCACAAGACACCACATCGGGCACGGCCT...CCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CGGACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACCTTTGACCCATTCTTaGGTGAGCGCCAGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RTKARDHTPEVLVRSCLVPLTHS*VSASVL
Trigger: GAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGG...TACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
CDS-3UTR CCA 90 bp AAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGAGATATGCAGGAGGGTaGGTTTCCTTCATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: KPSAQVQPASRMARYAGGRYAGG*VSFIPQ
Trigger: CTGGGGGATGAAGGAAACCCACCCTCCTGCATATCT...CCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCAGTTCTTGTGCAGGTTaGGCCTGGGAAAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SSGPASLPDGQICRRVGFSSCAG*AWESPK
Trigger: CTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT...GAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTGGTGTCCAGGCTaGTTTCTCGAATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLSLRTQACTSAAPARGTTWCPG*FLESAG
Trigger: ACCTGCAGATTCGAGAAACCAGCCTGGACACCAAGT...AGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp GCCATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCATGCAGTGGCCTACTTGGTGTCCAGGCTaGTTTCTCGAATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: AMDSSSPVLGPGQSMQWPTWCPG*FLESAG
Trigger: ACCTGCAGATTCGAGAAACCAGCCTGGACACCAAGT...AGGCCACTGCATGCTCTGGCCGGGCCCCAGGACAGGAGATGATGAGTCCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp CAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCACTTGGTGTCCAGGCTaGTTTCTCGAATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: QVGPGKVPSHQLRSSQPPTWCPG*FLESAG
Trigger: ACCTGCAGATTCGAGAAACCAGCCTGGACACCAAGT...GGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR CCA 90 bp GCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCTTCTGACACAGACTTaGTGTCCAGGCTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: AGWAWESPKPSAQVQPASLLTQT*CPGWFL
Trigger: GAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAG...GGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR CCA 90 bp TTTCTCTCCCTGGCAAGCAAGGCCCCCGAGTTTGAGGGTGAGAAAGAGAGAGTGGGCCTTGAGAATCCCTaGGGCCAGCCAGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: FLSLASKAPEFEGEKERVGLENP*GQPEPD
Trigger: GTCAGGCTCTGGCTGGCCCCAGGGATTCTCAAGGCC...CACTCTCTCTTTCTCACCCTCAAACTCGGGGGCCTTGCTTGCCAGGGAGAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp GAAATGTGCCAGCAGAGGCGGAGCAACTATCCTGCTTCTGCTCGGGCCCCTCATTCCCTGGGGAGCTACTaGGAGTTGCTGGGAACCTTC +
Preference number: 4 (lower is better)
Translates to: EMCQQRRSNYPASARAPHSLGSY*ELLGTF
Trigger: GAAGGTTCCCAGCAACTCCCAGTAGCTCCCCAGGGA...ATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGCCTCTGCTGGCACATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp AGGGGAGAGGAGAACCCTGAAGTGGGCCCTCCCAGTCCCATCTCTGGGCACAGATTACCAAGCTGGAAATaGAAAGCCCTCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: RGEENPEVGPPSPISGHRLPSWK*KALPIP
Trigger: GGGGATGGGGAGGGCTTTCCATTTCCAGCTTGGTAA...TCTGTGCCCAGAGATGGGACTGGGAGGGCCCACTTCAGGGTTCTCCTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp CCACGTACACAACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTGCCCACGTGGTTGGAGTGGCGTaGCGGATACGCCAAATCCCC +
Preference number: 4 (lower is better)
Translates to: PRTQQIPQVLRIKLPPAHVVGVA*RIRQIP
Trigger: GGGGATTTGGCGTATCCGCCACGCCACTCCAACCAC...GTGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGTTGTGTACGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp GAAATGTGCCAGCAGAGGCGGAGCAACTATCCTGCTTCTGCTCGGGCCCCTCATCCACTGTGGTTGGAGTaGCGTGGCGGATACGCCAAA +
Preference number: 4 (lower is better)
Translates to: EMCQQRRSNYPASARAPHPLWLE*RGGYAK
Trigger: TTTGGCGTATCCGCCACGCCACTCCAACCACAGTGG...ATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGCCTCTGCTGGCACATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp CTCTATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGGATGAGCTCCCACTGTaGTTGGAGTGGCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LYPSQHLIPLHVHNRSPKDELPL*LEWRGG
Trigger: TCCGCCACGCCACTCCAACCACAGTGGGAGCTCATC...CTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGATAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp CTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCAGATGAGCTCCCACTGTaGTTGGAGTGGCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LLLGLLNDLQGTGNVHSADELPL*LEWRGG
Trigger: TCCGCCACGCCACTCCAACCACAGTGGGAGCTCATC...TGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp CGGACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTATGCTCCCCATTTTCATaGGCAGGTCTGGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: RTKARDHTPEVLVRSCLVCSPFS*AGLGPD
Trigger: ATCAGGTCCCAGACCTGCCCATGAAAATGGGGAGCA...TACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CCA 90 bp GCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCGATACCAGATGTCTCTaGGTGGGTACCCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: AWDKDRQHLYRTQYLKGVDTRCL*VGTLGW
Trigger: CCAACCCAGGGTACCCACCCAGAGACATCTGGTATC...GACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CCA 90 bp CGCTCGGCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGAGCATGCAGTGGCCTaGGACAAAGACCGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RSAVELTLIGYLLITAVFEHAVA*DKDRQH
Trigger: GTGCTGGCGGTCTTTGTCCCAGGCCACTGCATGCTC...AAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGCCGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTTCCGGGAGGGCGTGCTaGCCATCATTAACTATGTGT +
Preference number: 4 (lower is better)
Translates to: LRSSQPPGWPDMQEGGFPSGRAC*PSLTMC
Trigger: ACACATAGTTAATGATGGCCAGCACGCCCTCCCGGA...AGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTTCTCCGGGAGGGCGTGCTaGCCATCATTAACTATGTGT +
Preference number: 4 (lower is better)
Translates to: QVQPASRMARYAGGWVSFSGRAC*PSLTMC
Trigger: ACACATAGTTAATGATGGCCAGCACGCCCTCCCGGA...GAAGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGAGAACAGTGAGGGAATaGTGGCCACTTTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: VFTTFWEWTPCDRCGVRGRTVRE*WPLSRT
Trigger: TGTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCT...CCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GGTGCTGACGGAGGCAGCCCAGGTACGTGTGGGCAGCGACATGCTGACCCGCTTTTTACGCCTACGATGTaGACATCCAGAACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GADGGSPGTCGQRHADPLFTPTM*TSRTVR
Trigger: CCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAA...AAGCGGGTCAGCATGTCGCTGCCCACACGTACCTGGGCTGCCTCCGTCAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GCAGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGAGCCTTTAATGCCCTaGTTTTGCCCTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: AVAWDKDRQHLYRTQYLKEPLMP*FCPAPL
Trigger: CAGAGGGGCAGGGCAAAACCAGGGCATTAAAGGCTC...CTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp CCTGGGCTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTAGGAGTTCTGCTGTCGAATaGGGTGCAGGGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PGLGTAVPGKMTQSRPFRSSAVE*GAGRGR
Trigger: TCTTCCCCTCCCTGCACCCCATTCGACAGCAGAACT...CCTAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp CCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGTGTATGTCCTCTTTaGCTCTCCATCCCGCATCTC +
Preference number: 4 (lower is better)
Translates to: PKPSAQVQPASRMARYAGGVCPL*LSIPHL
Trigger: GAGATGCGGGATGGAGAGCCAAAGAGGACATACACC...TCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639042.1
CDS-3UTR TCA 90 bp AAGTGCAACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTCTGTTGGCGGTGAGTTaGTCGAGCCGCAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: KCNWSPTTPTCMPSAIPILLAVS*SSRSRS
Trigger: GCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAG...AATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp CTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTTATCTTGTGACCTTGTaGTTTTCCCCGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LASRHSETQGALPVTGRGYLVTL*FSPSLV
Trigger: CACCAAAGACGGGGAAAATCACAAGGTCACAAGATA...ACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp CACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTGGAGGCAGCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HIRFTQLDDRGIYYCWRQLEVAF*HRLGVQ
Trigger: CTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAG...CTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
CDS-3UTR TCA 90 bp CCACCACCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTCTTACCCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: PPPRGCVTLGSPRLPRSYPRCSS*GGLLTQ
Trigger: CTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGG...GTAAGACCTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGGTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR TCA 90 bp GAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGCTTCACCCAGCTGGATaGCCGGGGCATCTACTATTG +
Preference number: 4 (lower is better)
Translates to: EHLGPPFSFRFPLTHSWVLHPAG*PGHLLL
Trigger: CAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAG...CACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp ATCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGACTTCACCCAGCTGGATaGCCGGGGCATCTACTATTG +
Preference number: 4 (lower is better)
Translates to: IPQVDERLFHQAGRAGPGLHPAG*PGHLLL
Trigger: CAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAG...TCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTGAACTGAGTCAGCACTaGGCTGAGCGATGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: AVLAQGSADRADVKLSPSELSQH*AERWSL
Trigger: GAGGCTCCATCGCTCAGCTCAGTGCTGACTCAGTTC...ACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp GAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGTGGGAGATTGGGGACTaGGCTCAGGATGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: EHLGPPFSFRFPLTHSWVWEIGD*AQDGSR
Trigger: CCTACTTCCATCCTGAGCTCAGTCCCCAATCTCCCA...CACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR TCA 90 bp CTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGGGCCGACATGAGCTTTaGGCTTCCCTGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LRTQACTSAAPARGTTFTGRHEL*ASLSLQ
Trigger: TTGCAGTGACAGGGAAGCTCAAAGCTCATGTCGGCC...CGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGAGGGCCGACATGAGCTTTaGGCTTCCCTGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: APRPALLIPVSFDPFLGEGRHEL*ASLSLQ
Trigger: TTGCAGTGACAGGGAAGCTCAAAGCTCATGTCGGCC...CTCACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTGCCTCCTCCTCCACCTACCTGGCCGACATaGGCTTTGAGCTTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: HPQPLLVCLAPSQLPPPPPTWPT*ALSFPV
Trigger: GACAGGGAAGCTCAAAGCTCATGTCGGCCAGGTAGG...TGGAGGAGGAGGCAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp CATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTGCTTTCCTGATGTTTaGAAATGCAGCCTACCTGGC +
Preference number: 4 (lower is better)
Translates to: HQLRSSQPPGWPDMQEGGCFPDV*KCSLPG
Trigger: GCCAGGTAGGCTGCATTTTCAAACATCAGGAAAGCA...CCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR TCA 90 bp CCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGACCTGCCCTGCTTTCCTaGTGTTTGAAAATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PKPSAQVQPASRMARYAGPALLS*CLKMQP
Trigger: AGGCTGCATTTTCAAACATCAGGAAAGCAGGGCAGG...TCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR TCA 90 bp GAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGGTGTTCTGGCCGACATaGGCTTTGAGCTTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: EHLGPPFSFRFPLTHSWVVFWPT*ALSFPV
Trigger: GACAGGGAAGCTCAAAGCTCATGTCGGCCAGAACAC...CACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TATGGGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCGCCAGCGCCTTGTTTTaGTGTTCCAGGAAGCGAACC +
Preference number: 4 (lower is better)
Translates to: YGHLHVFTTFWEWTPCDRASALF*CSRKRT
Trigger: GGTTCGCTTCCTGGAACAGCAAAACAAGGCGCTGGC...GCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp ACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATCCAGCCTGGTAGACGTCTaGCAGCTTGGTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TSAAPARGTTFTPTMWTSSLVDV*QLGGLL
Trigger: AAGGAGCCCACCAAGCTGGCAGACGTCTACCAGGCT...GGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACTCATCCTGGAGCTTCTaGCTCACAGTGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LYFCGTRKGDYFYAYDVDSSWSF*LTVARS
Trigger: GGACCTGGCCACTGTGAGGCAGAAGCTCCAGGATGA...GTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp AAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCCAGGGTGGCTTCATCTaGTTCCTGTCTATAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KSQAISSGPASLPDGQICQGGFI*FLSIGS
Trigger: GCTGCCTATAGACAGGAAGCAGATGAAGCCACCCTG...GCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp GCGTTGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTGGAGCGGTACCACTCTGCCATTGCCTCATACTaGGTGCGGATCTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: ALRAAASVRSANLERYHSAIASY*VRISFR
Trigger: CCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGC...AGAGTGGTACCGCTCCAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp GGCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGGTTGCTGGACGCCATTaGCTCATACTGCGTGCGGAT +
Preference number: 4 (lower is better)
Translates to: GSACSGICRQGRCQALTQVAGRH*LILRAD
Trigger: ATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAAC...CTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp GAGCAGCTCCACTGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTTCCTGCTCGCGCATCTaGCTCTCCAGGGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: EQLHCAPKDSPPLPLTSSSCSRI*LSRDSF
Trigger: GAACGAGTCCCTGGAGAGGCAGATGCGCGAGCAGGA...AGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCAGTGGAGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp CCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGTCATCGCTCAGGAGGTCCAGGTTGGAGAAGGTCTaGACGGGAATGGTGATCCGG +
Preference number: 4 (lower is better)
Translates to: PGWQLRWTETLESSLRRSRLEKV*TGMVIR
Trigger: CCGGATCACCATTCCCGTGCAGACCTTCTCCAACCT...GGACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp CCCGAAGAGGTGCCAGCTGTAGTCTGGTTCTACCAAAAGCACCTAGGTAGCAGCGCGGAGCAACTATCCTaGTTCTGCTCGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: PEEVPAVVWFYQKHLGSSAEQLS*FCSGPS
Trigger: TGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGC...GCTGCTACCTAGGTGCTTTTGGTAGAACCAGACTACAGCTGGCACCTCTTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp TCCACTGGGAATAAATTGCCTTGCACTTGGCGGCTTCCTCTGCAGATTGTTGCTGGGCGATGTAGTAGGTaGCCCCCGCCCTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: STGNKLPCTWRLPLQIVAGRCSR*PPPSSP
Trigger: AGGGGAGGAGGGCGGGGGGCACCTACTACATCGCCC...AGCAACAATCTGCAGAGGAAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp ATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCGCGTCCCCTCCAGTCTaGACGGGGCAGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: MFSLLVFRAQSEDSGLYFASPPV*TGQSSW
Trigger: CCAGGAGGACTGCCCCGTGCAGACTGGAGGGGACGC...GAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp AGGGGCTCAGAGGCTGGGGCGGCCTGGTATGACACAGCAAGGAAGAGGCCTTTAGTCTGCTCACCAGTCTaGTCAGTCAAAGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RGSEAGAAWYDTARKRPLVCSPV*SVKAEW
Trigger: CCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGAC...TAAAGGCCTCTTCCTTGCTGTGTCATACCAGGCCGCCCCAGCCTCTGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp AGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCGCAGGGTGTGCTAGTTaGTGGCTTCCGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RDSVLVQVGPGKVPSHQLAGCAS*WLPAGC
Trigger: ACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGC...GAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTGTGCGGGGCATCTACTATTaGTGGAGGCAGGGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: SHGHYPASFSDPETRSAVRGIYY*WRQGVL
Trigger: TAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCG...CACAGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTCTGTGCCAAGGAAGCTaGGGACCAAGGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: LTRFSIRMFSLLVFRAQSLCQGS*GPRPGT
Trigger: GGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAG...AGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCGGATGGCCAGATATaGAGGAGGGTGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LRTQACTSAAPARGTTFTPDGQI*RRVGFL
Trigger: AAGGAAACCCACCCTCCTGCATATCTGGCCATCCGG...CGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CCCAGGTGGCAGGACGTCCCCACCCATCTTAGACTGATCAGGGTCAGTCTAGGAGACTCCTTAATGACCTaGAGGGGACAGGGAACGTGC +
Preference number: 4 (lower is better)
Translates to: PRWQDVPTHLRLIRVSLGDSLMT*RGQGTC
Trigger: GCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTC...TCCTAGACTGACCCTGATCAGTCTAAGATGGGTGGGGACGTCCTGCCACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR GCA 90 bp GTGGACAAATCTGTTACAGCCTGCTCCCCATTTTCATGGGCAGGTCTGGGACCTCCTGGGTGCCCCAGGTaGCCATTCAGTTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: VDKSVTACSPFSWAGLGPPGCPR*PFSSTS
Trigger: GCTGGTGGAACTGAATGGGCACCTGGGGCACCCAGG...AGGTCCCAGACCTGCCCATGAAAATGGGGAGCAGGCTGTAACAGATTTGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR GCA 90 bp GGGCATCTACTATTGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGGGGTGCTGGTTCGGAGCTaGTTAGTACCCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GHLLLLEAGCASCWLPAGVLVRS*LVPCEK
Trigger: CTTCTCACAGGGTACTAAGCAGCTCCGAACCAGCAC...CCCAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAGTAGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp TGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTGCTACCTCAAGGCCGTaGCCGATGTGGTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: CGQRHADPLQHPHVQLVGATSRP*PMWCLV
Trigger: CACAAGACACCACATCGGGCACGGCCTTGAGGTAGC...ACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp TCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGTCGGCCTCTGCTACCTaGAGAGCCCAGACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SACWFSGLSLRTQACTSASASAT*RAQTSP
Trigger: GGGAGAGGTCTGGGCTCTGCAGGTAGCAGAGGCCGA...CGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR GCA 90 bp GCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGAGGAGCTTCCCTGTCACTaGAAACCCGAAGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: APRPALLIPVSFDPFLGEELPCH*KPEEVP
Trigger: TGGCACCTCTTCGGGTTTGCAGTGACAGGGAAGCTC...CTCACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GGCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGCAGAAGGGCAGTGCTTaGTCAGGGATCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: GSACSGICRQGRCQALTQQKGSA*SGICRQ
Trigger: CTGTCTGCAGATCCCTGAGCAAGCACTGCCCTTCTG...CTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp TGCTGTCGGGCCAGCTGCTCCTGGAGTTCCCGAACCTCCTCCTCGTGGATCTTCAGGTTGGTTTCATCCTaGAGCTTCTGCCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: CCRASCSWSSRTSSSWIFRLVSS*SFCLTV
Trigger: CACTGTGAGGCAGAAGCTCCAGGATGAAACCAACCT...GAAGATCCACGAGGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR CCA 90 bp ATAGGCAGCCAGGTTGTTCTCGGCTTCCAGCCTCAGGTTGGTTTCATCCTGGAGCCAGACGGGCCAGGGTaGCTTCATCTGCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: IGSQVVLGFQPQVGFILEPDGPG*LHLLPV
Trigger: GACAGGAAGCAGATGAAGCCACCCTGGCCCGTCTGG...CTCCAGGATGAAACCAACCTGAGGCTGGAAGCCGAGAACAACCTGGCTGCCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR CCA 90 bp AGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCCCAGACGGGCCAGGGTaGCTTCATCTGCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RDSVLVQVGPGKVPSHQLPDGPG*LHLLPV
Trigger: GACAGGAAGCAGATGAAGCCACCCTGGCCCGTCTGG...GAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp CTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTAGGGGAAGCCGAACCTCCTCCTCGTaGATCTTCCTCAAGAACCGG +
Preference number: 4 (lower is better)
Translates to: LGTAVPGKMTQSRPFRGSRTSSS*IFLKNR
Trigger: CCGGTTCTTGAGGAAGATCCACGAGGAGGAGGTTCG...GCTTCCCCTAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp AGAGCAGCTCCACTGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCACGTCAAGCTCCACATaGACCTGCTGTCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RAAPLRTQGLTTFTTNKLTSSST*TCCRAS
Trigger: GCTGGCCCGACAGCAGGTCCATGTGGAGCTTGACGT...GAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCAGTGGAGCTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp GAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAGGCGCCGGTAGTCGTTaGCTTCGTGCTTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: EFSPRDSVLVQVGPGKVPGAGSR*LRAWPG
Trigger: GCCAGGCCAAGCACGAAGCCAACGACTACCGGCGCC...TGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp GGGACAGGTGGTAGGAACATGTGGACAAATCTGTTACAGCCTGCTCCCCATTTTGCGCCTCCTGATAACTaGCCGCCTCCCGCACGTGCC +
Preference number: 4 (lower is better)
Translates to: GTGGRNMWTNLLQPAPHFAPPDN*PPPARA
Trigger: GGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGC...AAAATGGGGAGCAGGCTGTAACAGATTTGTCCACATGTTCCTACCACCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp TCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCCTCGAATCTGCAGGTTaGAGAAGGTCTGCACGGGAA +
Preference number: 4 (lower is better)
Translates to: SLPVKLGKAPCLRGRQLTLESAG*RRSARE
Trigger: TTCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAG...GGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp GCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTG +
Preference number: 4 (lower is better)
Translates to: AQVQPASRMARYAGGWVSMFLLR*PSDTDL
Trigger: CAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACAT...GGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp ATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGTGCTGTTAGTTGGAGTTGCTaGGTGCTGGGTGGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: IPPSTSSLSTYTTDPPSAVSWSC*VLGGCR
Trigger: ACGGCACCCACCCAGCACCCAGCAACTCCAACTAAC...AGCACTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp CACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTGCCTCCTCCTCCAGTTAGTTGGAGTTGCTaGGTGCTGGGTGGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: HPQPLLVCLAPSQLPPPPVSWSC*VLGGCR
Trigger: ACGGCACCCACCCAGCACCCAGCAACTCCAACTAAC...TGGAGGAGGAGGCAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp CACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAAACAACCCTCTGAGCTaGGCATGGTGGCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: HLHVFTTFWEWTPCDRCGNNPLS*AWWLQS
Trigger: AGATTGGAGCCACCATGCCCAGCTCAGAGGGTTGTT...TCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp GTGGACAAATCTGTTACAGCCTGCTCCCCATTTTCATGGGCAGGTCTGGGACCTGGTCCTTCTGGGATCTaGGCAGGTGACTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VDKSVTACSPFSWAGLGPGPSGI*AGDCPR
Trigger: CCTGGGGCAGTCACCTGCCCAGATCCCAGAAGGACC...AGGTCCCAGACCTGCCCATGAAAATGGGGAGCAGGCTGTAACAGATTTGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp CCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGTCATCGCTCAGGAGGTCCGAGGCCAAGTGCAACTaGTCACCCACAACCCCTACT +
Preference number: 4 (lower is better)
Translates to: PGWQLRWTETLESSLRRSEAKCN*SPTTPT
Trigger: AGTAGGGGTTGTGGGTGACCAGTTGCACTTGGCCTC...GGACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp TTTCTCTCCCTGGCAAGCAAGGCCCCCGAGTTTGAGGGTGAGAAAGAGAGAGTGGAGGCTGGGGCGGCCTaGTATGACACAGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FLSLASKAPEFEGEKERVEAGAA*YDTARK
Trigger: CTTCCTTGCTGTGTCATACCAGGCCGCCCCAGCCTC...CACTCTCTCTTTCTCACCCTCAAACTCGGGGGCCTTGCTTGCCAGGGAGAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp ACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACCCTCAGACGTGTGGCAGTaGCTTACTGGGGTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: TKARDHTPEVLVRSCLVPSDVWQ*LTGVKK
Trigger: CTTCTTAACCCCAGTAAGCCACTGCCACACGTCTGA...GGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp CCCTCCAGACTGCCCCTTGGGGGTGAGTTTCTTGTTAGTTGGAGTTGCTGGGTGAGGAGAACCCTGAAGTaGGCCCTCCCAGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: PSRLPLGGEFLVSWSCWVRRTLK*ALPVPS
Trigger: AGATGGGACTGGGAGGGCCCACTTCAGGGTTCTCCT...CACCCAGCAACTCCAACTAACAAGAAACTCACCCCCAAGGGGCAGTCTGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp CAGAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGACTTGGTGTCCAGGCTaGTTTTCCCTGTCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: QRPPGGSCLTSHPCAPAWTWCPG*FSLSSW
Trigger: CCAGCTTGACAGGGAAAACCAGCCTGGACACCAAGT...CCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR CCA 90 bp TGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCGGCATCTACTATTGCTaGAGGCAGGGTGTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: CAGWAWESPKPSAQVQPAGIYYC*RQGVLV
Trigger: AACTAGCACACCCTGCCTCCAGCAATAGTAGATGCC...GGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: VLVQVGPGKVPSHQLRSSRCGVL*LKGCAK
Trigger: CTTGGCACAGCCCTTGAGCCACAAGACACCACATCG...GCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GGCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACAGGCCGTGCCCGATGTaGTGTCTTGTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: GCGAHPDRLPAHHSSLCHRPCPM*CLVAQG
Trigger: CCCTTGAGCCACAAGACACCACATCGGGCACGGCCT...GTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGCCACTTTCCAGGACAGGCCGTGCCCGATGTaGTGTCTTGTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: AYDVDIQNSEGMVATFQDRPCPM*CLVAQG
Trigger: CCCTTGAGCCACAAGACACCACATCGGGCACGGCCT...GTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GCAGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGAGATATGCAGGAGGGTaGGTTTCCTTCATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: AVAWDKDRQHLYRTQYLKRYAGG*VSFIPQ
Trigger: CTGGGGGATGAAGGAAACCCACCCTCCTGCATATCT...CTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTGGAGGCAGTGTGCAGGTTGGGCCTaGGAAAGTCCCAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: HIRFTQLDDRGIYYCWRQCAGWA*ESPKPS
Trigger: TGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA...CTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AGCCTCAGGGATGAAAGAATAAAGCAGAGAGCCTGGCGTCCAGGCACAGCGAGAGGAACTCAGGGGGATTaGGAGGATGGGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SLRDERIKQRAWRPGTARGTQGD*EDGVGE
Trigger: CTCACCCACCCCATCCTCCCAATCCCCCTGAGTTCC...TCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTATTCTTTCATCCCTGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp ATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCACTTGGTGTCCAGGCTaGTTTCTCGAATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ISLPEHLGPPFSFRFPLTTWCPG*FLESAG
Trigger: ACCTGCAGATTCGAGAAACCAGCCTGGACACCAAGT...GGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639369.1
CDS-3UTR CCA 90 bp GGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGCTTCTGACACAGACTTaGTGTCCAGGCTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GTSMSSPPSGNGPPVTAALLTQT*CPGWFL
Trigger: GAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAG...CGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp CCACGTACACAACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTGCCCACCCAGGCTTTCCTCCATaGCCTGGCCTTGAGAATCCC +
Preference number: 4 (lower is better)
Translates to: PRTQQIPQVLRIKLPPAHPGFPP*PGLENP
Trigger: GGGATTCTCAAGGCCAGGCCATGGAGGAAAGCCTGG...GTGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGTTGTGTACGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp TGTGGTTGGAGTGGCGTGGCGGATACGCCAAATCCCCTCTTCCCATTCCCCTGGGCTACTGGGAGTTGCTaGGAACCTTCTATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: CGWSGVADTPNPLFPFPWATGSC*EPSMCQ
Trigger: CTGGCACATAGAAGGTTCCCAGCAACTCCCAGTAGC...CCAGGGGAATGGGAAGAGGGGATTTGGCGTATCCGCCACGCCACTCCAACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp CGTCATGCCTGGCGAGTGGTAAGCTGCTGGAGTAAGATGAGCTCCCACTGTGGTTCCCTGGGGAGCTACTaGGAGTTGCTGGGAACCTTC +
Preference number: 4 (lower is better)
Translates to: RHAWRVVSCWSKMSSHCGSLGSY*ELLGTF
Trigger: GAAGGTTCCCAGCAACTCCCAGTAGCTCCCCAGGGA...ACCACAGTGGGAGCTCATCTTACTCCAGCAGCTTACCACTCGCCAGGCATGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp CCCACTGTGGTTGGAGTGGCGTGGCGGATACGCCAAATCCCCTCTTCCCATTCCCGAGTGGTAAGCTGCTaGAGTAAGATGAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PTVVGVAWRIRQIPSSHSRVVSC*SKMSSH
Trigger: GTGGGAGCTCATCTTACTCCAGCAGCTTACCACTCG...GGAATGGGAAGAGGGGATTTGGCGTATCCGCCACGCCACTCCAACCACAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp ATGAGGGTGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGTCAAAGGCTACATCTTaGCCCCAGTCCCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: MRVFIDHGNQLHIRFTQLSKATS*PQSRPL
Trigger: GAGAGGGCGGGACTGGGGCCAAGATGTAGCCTTTGA...CAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACACCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp AGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCAAGAGTGGAGGGAGCTaGTGTATGTCCTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSGPASLPDGQICRRVGFKSGGS*CMSSLA
Trigger: AGCCAAAGAGGACATACACCAGCTCCCTCCACTCTT...GAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CCA 90 bp GGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTAGTCTTCACCACCTTCTaGGAATGGACCCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: GLRPVLLRHPQGGLLLRLVFTTF*EWTPCD
Trigger: GTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGAC...TAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTTCAGAACAGTGAGGGAATaGTGGCCACTTTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: QVQPASRMARYAGGWVSFRTVRE*WPLSRT
Trigger: TGTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCT...GAAGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGAGAACAGTGAGGGAATaGTGGCCACTTTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: GTSMSSPPSGNGPPVTAARTVRE*WPLSRT
Trigger: TGTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCT...CGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp TCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGGTGCCAGCTGTAGTCTaGTTCTACCAAAAGCACCTA +
Preference number: 4 (lower is better)
Translates to: SGLSLRTQACTSAAPARGVPAVV*FYQKHL
Trigger: TAGGTGCTTTTGGTAGAACCAGACTACAGCTGGCAC...CCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GACCAGGGCCTAGCAGGACAGGGGCAGCTGCAAGCCCCACCTAGAAGTACCCTGCACCTAGAAGTACCCTaGTATGATAGGCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: DQGLAGQGQLQAPPRSTLHLEVP*YDRLWL
Trigger: TAGCCAGAGCCTATCATACCAGGGTACTTCTAGGTG...CAGGGTACTTCTAGGTGGGGCTTGCAGCTGCCCCTGTCCTGCTAGGCCCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp CATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGCTTCTGACACAGACTTaGTGTCCAGGCTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HQLRSSQPPGWPDMQEGGLLTQT*CPGWFL
Trigger: AAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAG...CCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639042.1
CDS-3UTR CCA 90 bp GACTCCAGTGCCCTTCCCACGAGGCCCTGCTGTACTGACCTCGAATCTGCAGGTGGCTTGAGTGTTATCTaGGAGGGGCGCATGTCTATC +
Preference number: 4 (lower is better)
Translates to: DSSALPTRPCCTDLESAGGLSVI*EGRMSI
Trigger: GATAGACATGCGCCCCTCCCAGATAACACTCAAGCC...ACCTGCAGATTCGAGGTCAGTACAGCAGGGCCTCGTGGGAAGGGCACTGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
3UTR CAA 72 bp GCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTaGAGTCATCGCTCAGGAGGTCCTTCTGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: ASLDGSSGGLRH*SHRSGGPSGIW
Trigger: CCAGATCCCAGAAGGACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253408.10
ENST00000586125.2
ENST00000588735.3
3UTR CAA 72 bp GAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTaGTGCTCCTGCTTGGACTCCTTAATGACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EATRWVLPHITS*CSCLDSLMTCR
Trigger: CCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR CAA 72 bp GCTCTCCTCCAGAATTCCCTGGGGAGCTACTGGGAGTaGCTGGGAACCTTCTATGTGCCAGCCCCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ALLQNSLGSYWE*LGTFYVPAPGF
Trigger: AAAGCCTGGGGCTGGCACATAGAAGGTTCCCAGCAACTCCCAGTAGCTCCCCAGGGAATTCTGGAGGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR CAA 72 bp GAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGCGCCAGTGTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: EHLGPPFSFRFP*THSWVSASVLK
Trigger: CTTGAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
CDS-3UTR TCA 90 bp CGCTCGGCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTCCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: RSAVELTLIGYLLITAVFPRCSS*GGLLTQ
Trigger: CTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGG...AAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGCCGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp AGGAGCCCTTTGCAGATGAATACTATGGGCACCTCCATGTCTTCACCACCTTCTTGGGATCTGGGCAGGTaGCTGCCCCAGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSPLQMNTMGTSMSSPPSWDLGR*LPQVAG
Trigger: TCCTGCCACCTGGGGCAGTCACCTGCCCAGATCCCA...AGAAGGTGGTGAAGACATGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp GCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCCTCGTTCTCAGATCCTaGGACTCGCTCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: AVELTLIGYLLITAVFVTLVLRS*DSLGCG
Trigger: TCCACAGCCGAGCGAGTCTCAGGATCTGAGAACGAG...GGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CCCTGTGAGAAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGCTTCCGGCTGGGTGTaGCATCTCATGGGCACTACC +
Preference number: 4 (lower is better)
Translates to: PCEKTKTIREGVLAIINYASGWV*HLMGTT
Trigger: GGTAGTGCCCATGAGATGTCACACCCAGCCGGAAGC...ATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTTCTCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR TCA 90 bp ACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTCTTCACCCAGCTGGATaGCCGGGGCATCTACTATTG +
Preference number: 4 (lower is better)
Translates to: TSSTSASPSWMTGASTIALHPAG*PGHLLL
Trigger: CAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAG...AGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp AACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCCATGAGGGTGTTCATTaGCCACGGCAACCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: NQLHIRFTQLDDRGIYYCHEGVH*PRQPAP
Trigger: TGGAGCTGGTTGCCGTGGTCAATGAACACCCTCATG...GCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CGTCCTGGGCTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTAAGAATCCTCTGAACTaGGTCAGCACTGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RPGLGTAVPGKMTQSRPFKNPLN*VSTELS
Trigger: GCTCAGCTCAGTGCTGACTCAGTTCAGAGGATTCTT...AAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAGCCCAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp AGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGGGCCAGCCAGAGCCTaGCTGGGCCCAAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: RLCNLGKSPTSQVLLFLIGPARA*LGPNPS
Trigger: GGAGGGATTTGGGCCCAGTCAGGCTCTGGCTGGCCC...TATCAAGAAAAGTAAGACCTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR TCA 90 bp CCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGAAGTCCCGCCCTCTCATaGACAGATCAGAGTCCACTC +
Preference number: 4 (lower is better)
Translates to: PVLLRHPQGGLLLRLRCGSPALS*TDQSPL
Trigger: GAGTGGACTCTGATCTGTTCATGAGAGGGCGGGACT...TCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp AAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAACAGGTCCTGGGAGATTGGGGACTaGGCTCAGGATGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: KDRQHLYRTQYLKGVNRSWEIGD*AQDGSR
Trigger: CCTACTTCCATCCTGAGCTCAGTCCCCAATCTCCCA...GGACCTGTTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR TCA 90 bp AGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTACCGCACACAGTACCTaGAGGGTGTCAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RPVLLRHPQGGLLLRLRCTAHST*RVSTGP
Trigger: TGGACCTGTTGACACCCTTCAGGTACTGTGTGCGGT...ACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp TCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAAAGTGGGCAGCCGGCCTGCTTAGTACCCTGTaGGAAGACAAAGACCATCCG +
Preference number: 4 (lower is better)
Translates to: SGRACWPSLTMCPKWAAGLLSTL*EDKDHP
Trigger: CGGATGGTCTTTGTCTTCTCACAGGGTACTAAGCAG...GCCGGCTGCCCACTTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR TCA 90 bp GCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGAGGGAGCCCTTTGCAGATaGATACTATGGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: APRPALLIPVSFDPFLGEGALCR*ILWAPP
Trigger: TGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCC...CTCACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp GGTACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGGAGCCCTTTGCAGATaGATACTATGGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GTCGQRHADPLQHPHVQLGALCR*ILWAPP
Trigger: TGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCC...AAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR TCA 90 bp ATCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGAGGACATCCAGAACAGTaGGGGAATGGTGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: IPQVDERLFHQAGRAGPGGHPEQ*GNGGHF
Trigger: AAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCC...TCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp GTACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTTCAGGGCTCAGTCTaGGGACTCAGGCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: VRVGSDMLTRFSIRMFSLFQGSV*GLRPVL
Trigger: AAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAA...CAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GAGAAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAGTGCTGACGGACTTTaGTGGGCGGGTGCTGACGGA +
Preference number: 4 (lower is better)
Translates to: EKTKTIREGVLAIINYVSSADGL*WAGADG
Trigger: TCCGTCAGCACCCGCCCATCAAAGTCCGTCAGCACT...GGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp CGCTCGGCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGGCCGACATGAGCTTTaGGCTTCCCTGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: RSAVELTLIGYLLITAVFGRHEL*ASLSLQ
Trigger: TTGCAGTGACAGGGAAGCTCAAAGCTCATGTCGGCC...AAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGCCGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCCAGGCTGGTTTCTTGTaGTTTTCCCCGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: AWDKDRQHLYRTQYLKGVQAGFL*FSPSLV
Trigger: CACCAAAGACGGGGAAAATCACAAGAAACCAGCCTG...GACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639042.1
CDS-3UTR GCA 90 bp CAATCTTCCTCTCCAGATCCAGACGGGCCAGGGTGGCTTCATCTGCTTCCTGTCAGTGGCCAGGTCCTGTaGCAGATTGTCCCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: QSSSPDPDGPGWLHLLPVSGQVL*QIVPLN
Trigger: GTTGAGAGGGACAATCTGGCACAGGACCTGGCCACT...GACAGGAAGCAGATGAAGCCACCCTGGCCCGTCTGGATCTGGAGAGGAAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR GCA 90 bp AGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCTCATCCTGGAGCTTCTaGCTCACAGTGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RDSVLVQVGPGKVPSHQLSSWSF*LTVARS
Trigger: GGACCTGGCCACTGTGAGGCAGAAGCTCCAGGATGA...GAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp CCCAGGTGGCAGGACGTCCCCACCCATCTTAGACTGATCAGGGTCAGTCTAGGACAGGGTGGCTTCATCTaGTTCCTGTCTATAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PRWQDVPTHLRLIRVSLGQGGFI*FLSIGS
Trigger: GCTGCCTATAGACAGGAAGCAGATGAAGCCACCCTG...TCCTAGACTGACCCTGATCAGTCTAAGATGGGTGGGGACGTCCTGCCACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp AGGGGGACTACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGCTGTCGGGCCAGCTaGTCCTGGAGTTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: RGTTFTPTMWTSRTVREWCCRAS*SWSSRT
Trigger: GGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCA...CCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCATGCTGTCGGGCCAGCTaGTCCTGGAGTTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: EFSPRDSVLVQVGPGKVPCCRAS*SWSSRT
Trigger: GGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCA...TGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp AATCTTCCTCTCCAGATCCAGACGGGCCAGGGTGGCTTCATCTGCTTCCTGTCTGATCTCTTTCAGGGCTaGGGTGAGGTCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: NLPLQIQTGQGGFICFLSDLFQG*GEVWLG
Trigger: GCCAAGCCAGACCTCACCGCAGCCCTGAAAGAGATC...AGACAGGAAGCAGATGAAGCCACCCTGGCCCGTCTGGATCTGGAGAGGAAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR GCA 90 bp CTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCTGATCTCTTTCAGGGCTaGGGTGAGGTCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LAQGSADRADVKLSPSSADLFQG*GEVWLG
Trigger: GCCAAGCCAGACCTCACCGCAGCCCTGAAAGAGATC...AGCAGAACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp CTTCTGCCTCACAGTGGCCAGGTCCTGTGCCAGATTGTCCCTCTCAACCTCCAGTTGCCTCATACTGCGTaGGGATCTCTTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLPHSGQVLCQIVPLNLQLPHTA*GSLSGL
Trigger: CAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAA...CTGGAGGTTGAGAGGGACAATCTGGCACAGGACCTGGCCACTGTGAGGCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR GCA 90 bp GGCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGAGCGTCTGTCAGGTCTaGAAACTTGGAGCGGTACCA +
Preference number: 4 (lower is better)
Translates to: GSACSGICRQGRCQALTQSVCQV*KLGAVP
Trigger: TGGTACCGCTCCAAGTTTGCAGACCTGACAGACGCT...CTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp AGAGGCGGAGCAACTATCCTGCTTCTGCTCGGGCCCCTCATGAGACGGGGCAGAACATCCTTGTGCTCCTaGTTGGACTCCTTAATGACC +
Preference number: 4 (lower is better)
Translates to: RGGATILLLLGPLMRRGRTSLCS*LDSLMT
Trigger: GGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGT...TCTGCCCCGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp CCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGACACATCACATCCTTGTaGTCCTGCTTGGACTCCTTA +
Preference number: 4 (lower is better)
Translates to: PKPSAQVQPASRMARYAGHITSL*SCLDSL
Trigger: TAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTG...TCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CCTCCAGACTGCCCCTTGGGGGTGAGTTTCTTGTTAGTTGGAGTTGCTGGGTGCCATTCTAACGCAAGCTaGTGGCCATGCCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PPDCPLGVSFLLVGVAGCHSNAS*WPCPSR
Trigger: TCTGGAGGGGCATGGCCAGCAGCTTGCGTTAGAATG...GCACCCAGCAACTCCAACTAACAAGAAACTCACCCCCAAGGGGCAGTCTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp GTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATAATCAAGCTCCCACCTaGCCACAGCGTGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: VLLRHPQGGLLLRLRCGHNQAPT*PQRAHR
Trigger: TCTGTGGGCACGCTGTGGGCAGGTGGGAGCTTGATT...ATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp AACCCTGAAGTGGGCCCTCCCAGTCCCATCTCTGGGCACAGATCCCACCAGTCTCAACCCCTACTTGTATaGCTAGCGCCATCCCAATTG +
Preference number: 4 (lower is better)
Translates to: NPEVGPPSPISGHRSHQSQPLLV*LAPSQL
Trigger: CAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTG...AGACTGGTGGGATCTGTGCCCAGAGATGGGACTGGGAGGGCCCACTTCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp AGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTCAACCCCTACTTGTATaGCTAGCGCCATCCCAATTG +
Preference number: 4 (lower is better)
Translates to: RDLPARAPRPALLIPVSFQPLLV*LAPSQL
Trigger: CAATTGGGATGGCGCTAGGCATACAAGTAGGGGTTG...AAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGAATCCAGAGGCCAAGTaGAACTGGTCACCCACAACC +
Preference number: 4 (lower is better)
Translates to: VPTDGIPGWQLRWTETLENPEAK*NWSPTT
Trigger: GGTTGTGGGTGACCAGTTGCACTTGGCCTCTGGATT...CTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp CCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGAGACAAAGTCATGCCCTaGCCCCATGGATACATCCCC +
Preference number: 4 (lower is better)
Translates to: PVLLRHPQGGLLLRLRCGDKVMP*PHGYIP
Trigger: GGGGATGTATCCATGGGGGCAGGGCATGACTTTGTC...TCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGCGGGGCATCTACTATTaGTGGAGGCAGGGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: DSVLVQVGPGKVPSHQLRRGIYY*WRQGVL
Trigger: TAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCG...CCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACCTGTGCCAAGGAAGCTaGGGACCAAGGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: ELTLIGYLLITAVFVTIHLCQGS*GPRPGT
Trigger: GGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAG...GTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGTGTTCTCAAGGCCGTaGCCGATGTGGTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: CSLTTATSSTSASPSWMTVFSRP*PMWCLV
Trigger: CACAAGACACCACATCGGGCACGGCCTTGAGAACAC...GGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
CDS-3UTR GCA 90 bp AGGGTGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGGATCCGGATGGCCAGATATaGAGGAGGGTGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RVFIDHGNQLHIRFTQLDPDGQI*RRVGFL
Trigger: AAGGAAACCCACCCTCCTGCATATCTGGCCATCCGG...ATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp ACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTCCGGATGGCCAGATATaGAGGAGGGTGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TSSTSASPSWMTGASTIAPDGQI*RRVGFL
Trigger: AAGGAAACCCACCCTCCTGCATATCTGGCCATCCGG...AGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp ACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTCCGGATGGCCAGATATaGAGGAGGGTGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TCGQRHADPLQHPHVQLVPDGQI*RRVGFL
Trigger: AAGGAAACCCACCCTCCTGCATATCTGGCCATCCGG...AACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTGGAGGCAGGAGACTCAGTTCTTGTaGAGGTTGGGCCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: HIRFTQLDDRGIYYCWRQETQFL*RLGLGK
Trigger: CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTC...CTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCCTGGGCTGGGCACTaGAGTTCCTGGGAAAATGAC +
Preference number: 4 (lower is better)
Translates to: AVLAQGSADRADVKLSPSSWAGH*SSWEND
Trigger: GTCATTTTCCCAGGAACTGCAGTGCCCAGCCCAGGA...ACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp CTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCAGACTCCTTAATGACCTaGAGGGGACAGGGAACGTGC +
Preference number: 4 (lower is better)
Translates to: LLLGLLNDLQGTGNVHSADSLMT*RGQGTC
Trigger: GCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTC...TGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR GCA 90 bp GCAGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGTATGTCCTCTTTGGCTaGGGGTGGAATTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AVAWDKDRQHLYRTQYLKYVLFG*GWNLVR
Trigger: CCTCACCAAATTCCACCCGCAGCCAAAGAGGACATA...CTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGAAATCTGTTACAGCCTaGTCCCCATTTTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: AISSGPASLPDGQICRRVKSVTA*SPFSWA
Trigger: TGCCCATGAAAATGGGGAGCAGGCTGTAACAGATTT...CACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR GCA 90 bp GAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCATGGCGCATCGGCCTCTaGTACCTGCAGAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: EFSPRDSVLVQVGPGKVPWRIGL*YLQSPD
Trigger: GTCTGGGCTCTGCAGGTAGCAGAGGCCGATGCGCCA...TGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR GCA 90 bp CATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGGCTGCTTTTCCTGGCTaGATAATCCTTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: HQLRSSQPPGWPDMQEGGAAFPG*IILSSS
Trigger: AGATGAGGAAAGGATTATGCAGCCAGGAAAAGCAGC...CCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp ACTGAGGCAGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTCTGCAGATTGTTGCTaGTTTTCCTGGCTGCATAAT +
Preference number: 4 (lower is better)
Translates to: TEAEISLPEHLGPPFSFRSADCC*FSWLHN
Trigger: ATTATGCAGCCAGGAAAAGCAGCAACAATCTGCAGA...CCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp AAGCCCCACCTAGAAGTACCCTGGTATGATAGGCTCTGGCTAGGAGCGCTGCAGAGAGCTGGATCCCTTTaGCCTGATCCTCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KPHLEVPWYDRLWLGALQRAGSL*PDPQSQ
Trigger: CTGGGACTGAGGATCAGGGCAAAGGGATCCAGCTCT...CTGCAGCGCTCCTAGCCAGAGCCTATCATACCAGGGTACTTCTAGGTGGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS-3UTR GCA 90 bp GCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCCACTCAGAAGGGCAGTaGTTGCTCAGGGATCTGCAG +
Preference number: 4 (lower is better)
Translates to: ACSGICRQGRCQALTQFCHSEGQ*LLRDLQ
Trigger: CTGCAGATCCCTGAGCAAGCACTGCCCTTCTGAGTG...GCAGAACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp TCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATCTGGTAGGTTGGAGAAGGTCTaGACGGGAATGGTGATCCTG +
Preference number: 4 (lower is better)
Translates to: SERQAANREPAAFHLQSGRLEKV*TGMVIL
Trigger: CAGGATCACCATTCCCGTGCAGACCTTCTCCAACCT...ACCAGATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS-3UTR CCA 90 bp GAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGACGTCTGCCAGCTTaGTGGGCTCCTTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: EFSPRDSVLVQVGPGKVPRRLPA*WAPWPA
Trigger: TGCGGGCCAAGGAGCCCACCAAGCTGGCAGACGTCT...TGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp GACTCGTTCGTGCCGCGCAGAGACTCCAGGTCGCAGGTCAAGGACTGCAACTGGCTTCATGCATGTTGCTaGACGCCATTGCCTCATACT +
Preference number: 4 (lower is better)
Translates to: DSFVPRRDSRSQVKDCNWLHACC*TPLPHT
Trigger: AGTATGAGGCAATGGCGTCCAGCAACATGCATGAAG...CCAGTTGCAGTCCTTGACCTGCGACCTGGAGTCTCTGCGCGGCACGAACGAGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CCA 90 bp GACCCCAGGTCCACCACCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTG +
Preference number: 4 (lower is better)
Translates to: DPRSTTTRLCNLGKSPTSMFLLR*PSDTDL
Trigger: CAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACAT...GGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGGTGGTGGACCTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp CCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTG +
Preference number: 4 (lower is better)
Translates to: PKPSAQVQPASRMARYAGMFLLR*PSDTDL
Trigger: CAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACAT...TCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp TGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCAACAGTCTAACGCAAGCTGCTaGCCATGCCCCTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: CLDSLMTCRGQGTCTVQQSNASC*PCPSRL
Trigger: CAGTCTGGAGGGGCATGGCCAGCAGCTTGCGTTAGA...CTGTTGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp ACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGTCATCGCACAGGAGGCTGAGGTaGGTAGACTGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TDGIPGWQLRWTETLESSHRRLR*VDCLSP
Trigger: TGGGCTCAAGCAGTCTACCCACCTCAGCCTCCTGTG...CGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp CCCAGGTGGCAGGACGTCCCCACCCATCTTAGACTGATCAGGGTCAGTCTAGGAGGATGGCAGCTCAGGTaGACTGAGACACTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: PRWQDVPTHLRLIRVSLGGWQLR*TETLES
Trigger: TGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCC...TCCTAGACTGACCCTGATCAGTCTAAGATGGGTGGGGACGTCCTGCCACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp GTGGACAAATCTGTTACAGCCTGCTCCCCATTTTCATGGGCAGGTCTGGGACCTGAGGCTGGGGCGGCCTaGTATGACACAGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VDKSVTACSPFSWAGLGPEAGAA*YDTARK
Trigger: CTTCCTTGCTGTGTCATACCAGGCCGCCCCAGCCTC...AGGTCCCAGACCTGCCCATGAAAATGGGGAGCAGGCTGTAACAGATTTGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp ATTCTCTTTCTCTCCCTGGCAAGCAAGGCCCCCGAGTTTGAGGGTGAGAAAGAGCCGGTCACTATGGGGTaGAGAGGGTCAGACGTGTGG +
Preference number: 4 (lower is better)
Translates to: ILFLSLASKAPEFEGEKEPVTMG*RGSDVW
Trigger: CCACACGTCTGACCCTCTCCACCCCATAGTGACCGG...CTCTTTCTCACCCTCAAACTCGGGGGCCTTGCTTGCCAGGGAGAGAAAGAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp CTATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGTGTCAGTCAAAGCAGAGTaGGTGCACTGGGGTGGACGT +
Preference number: 4 (lower is better)
Translates to: LSLPAPHPSPRTQQIPQVSVKAE*VHWGGR
Trigger: ACGTCCACCCCAGTGCACCCACTCTGCTTTGACTGA...CACTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp ATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGTGCTGGGTGTGACATCTCATaGGCACTACCCAGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: IPPSTSSLSTYTTDPPSAGCDIS*ALPSLV
Trigger: AACGAGGCTGGGTAGTGCCCATGAGATGTCACACCC...AGCACTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp AGGGTGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGGATGGGTGTGACATCTCATaGGCACTACCCAGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RVFIDHGNQLHIRFTQLDGCDIS*ALPSLV
Trigger: AACGAGGCTGGGTAGTGCCCATGAGATGTCACACCC...ATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCATCCGCTTCACCCAGCTaGATGACCGGGGCATCTACT +
Preference number: 4 (lower is better)
Translates to: ETQFLCRLGLGKSQAISSSASPS*MTGAST
Trigger: AGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGA...TGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CCACTTTCCAGGACAAGGGCCAGGAGCCCTTTGCAGATGAATACTATGGGCACCTCCGCTTCACCCAGCTaGATGACCGGGGCATCTACT +
Preference number: 4 (lower is better)
Translates to: PLSRTRARSPLQMNTMGTSASPS*MTGAST
Trigger: AGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGA...GGTGCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCTTGTCCTGGAAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp AGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RPVLLRHPQGGLLLRLRCRCGVL*LKGCAK
Trigger: CTTGGCACAGCCCTTGAGCCACAAGACACCACATCG...ACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GTCTGGTTCTACCAAAAGCACCTAGGTAGCAGCCACACCAAAGTGCTGACGGACAGGCCGTGCCCGATGTaGTGTCTTGTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: VWFYQKHLGSSHTKVLTDRPCPM*CLVAQG
Trigger: CCCTTGAGCCACAAGACACCACATCGGGCACGGCCT...GTCCGTCAGCACTTTGGTGTGGCTGCTACCTAGGTGCTTTTGGTAGAACCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTGTGCAGGTTGGGCCTaGGAAAGTCCCAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: DSVLVQVGPGKVPSHQLRCAGWA*ESPKPS
Trigger: TGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA...CCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GGTACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTAGTTCTTGTGCAGGTTaGGCCTGGGAAAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: GTCGQRHADPLQHPHVQLSSCAG*AWESPK
Trigger: CTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT...AAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CCA 90 bp TGTGGTTGGAGTGGCGTGGCGGATACGCCAAATCCCCTCTTCCCATTCCCCTGGACTTGGTGTCCAGGCTaGTTTCTCGAATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: CGWSGVADTPNPLFPFPWTWCPG*FLESAG
Trigger: ACCTGCAGATTCGAGAAACCAGCCTGGACACCAAGT...CCAGGGGAATGGGAAGAGGGGATTTGGCGTATCCGCCACGCCACTCCAACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp GTTAGTTGGAGTTGCTGGGTGCTGGGTGGGTGCCGTCTGGCAGGCCTGATACTGCTTCTGACACAGACTTaGTGTCCAGGCTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VSWSCWVLGGCRLAGLILLLTQT*CPGWFL
Trigger: GAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAG...CAGTATCAGGCCTGCCAGACGGCACCCACCCAGCACCCAGCAACTCCAACTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp GTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGGCTACTGGGAGTTGCTaGGAACCTTCTATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VPTDGIPGWQLRWTETLEATGSC*EPSMCQ
Trigger: CTGGCACATAGAAGGTTCCCAGCAACTCCCAGTAGC...CTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp CCCAGGTCCACCACCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGTTCCTTTTACCAAGCTaGAAATGGAAAGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PRSTTTRLCNLGKSPTSQFLLPS*KWKALP
Trigger: GGGGAGGGCTTTCCATTTCCAGCTTGGTAAAAGGAA...CTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGGTGGTGGACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp GGAAGAAAAGAGTGGAGGGAGCTGGTGTATGTCCTCTTTGGCTCTCCATCCCGCAGGCTGGTGGGAGATTaGGGACTGAGCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GRKEWRELVYVLFGSPSRRLVGD*GLSSGW
Trigger: CCATCCTGAGCTCAGTCCCCAATCTCCCACCAGCCT...GCGGGATGGAGAGCCAAAGAGGACATACACCAGCTCCCTCCACTCTTTTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639042.1
CDS-3UTR CCA 90 bp CTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAAGCAGAGACTGGGCCATaGACTCATCATCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LGQRPPAPLPHTVPEGCQAETGP*THHLLS
Trigger: GGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGC...TTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp ATGAGGGTGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGGCAGAGACTGGGCCATaGACTCATCATCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: MRVFIDHGNQLHIRFTQLAETGP*THHLLS
Trigger: GGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGC...CAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACACCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGTCATCGCTCAGGAGGTCCTCCACCAGCAGAGACTaGGCCATGGACTCATCATCT +
Preference number: 4 (lower is better)
Translates to: PGWQLRWTETLESSLRRSSTSRD*AMDSSS
Trigger: AGATGATGAGTCCATGGCCCAGTCTCTGCTGGTGGA...GGACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp ATCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGATCCACCAGCAGAGACTaGGCCATGGACTCATCATCT +
Preference number: 4 (lower is better)
Translates to: IPQVDERLFHQAGRAGPGSTSRD*AMDSSS
Trigger: AGATGATGAGTCCATGGCCCAGTCTCTGCTGGTGGA...TCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CTATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGTGGTCTTCACCACCTTCTaGGAATGGACCCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LSLPAPHPSPRTQQIPQVVFTTF*EWTPCD
Trigger: GTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGAC...CACTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp TGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGTCTTCACCACCTTCTaGGAATGGACCCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CSLTTATSSTSASPSWMTVFTTF*EWTPCD
Trigger: GTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGAC...GGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGACAGTGAGGGAATGGTaGCCACTTTCCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: LRTQACTSAAPARGTTFTTVREW*PLSRTR
Trigger: CCTTGTCCTGGAAAGTGGCCACCATTCCCTCACTGT...CGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGACCACTGTGCTCCTGTaGGCATGGGGGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VLNFPLETQFLCRLGLGKTTVLL*AWGLQA
Trigger: GGCCTGGAGCCCCCATGCCCACAGGAGCACAGTGGT...CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
3UTR CAA 72 bp TGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTaGGACTCCTTAATGACCTGCAGGGGACAGGGAACG +
Preference number: 4 (lower is better)
Translates to: WVLPHITSLCSC*DSLMTCRGQGT
Trigger: CGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR CAA 72 bp TCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACAGACTTGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SRISTVFTTMFL*RWPSDTDLVSR
Trigger: CCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR CAA 72 bp GAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGCGCCAGTGTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: EHLGPPFSFRFP*THSWVSASVLE
Trigger: TTCTAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR TCA 90 bp CACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACCCTGTGAGAAGACAAAGCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HTPEVLVRSCLVPCEKTKLEVAF*HRLGVQ
Trigger: CTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAG...CTTTGTCTTCTCACAGGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
CDS-3UTR TCA 90 bp AGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGCCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: RLSSCAGWAWESPKPSAQPRCSS*GGLLTQ
Trigger: CTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGG...CTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp TACTATGGGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCTTCACCCAGCTGGATaGCCGGGGCATCTACTATTG +
Preference number: 4 (lower is better)
Translates to: YYGHLHVFTTFWEWTPCDLHPAG*PGHLLL
Trigger: CAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAG...GTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp GCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCCATGAGGGTGTTCATTaGCCACGGCAACCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AVELTLIGYLLITAVFVTHEGVH*PRQPAP
Trigger: TGGAGCTGGTTGCCGTGGTCAATGAACACCCTCATG...GGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp TACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGCCACTGGCAGGTCTGGGACCTaGTCTGAGAAGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: YFYAYDVDIQNSEGMVATGRSGT*SEKWRG
Trigger: GCCCCTCCACTTCTCAGATCAGGTCCCAGACCTGCC...AGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp TCCAGGACAAGGGCCAGGAGCCCTTTGCAGATGAATACTATGGGCACCTCCATGACCGCACACAGTACCTaGAGGGTGTCAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SRTRARSPLQMNTMGTSMTAHST*RVSTGP
Trigger: TGGACCTGTTGACACCCTTCAGGTACTGTGTGCGGT...CATGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCTTGTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp GAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGCTGCTTAGTACCCTGTaGGAAGACAAAGACCATCCG +
Preference number: 4 (lower is better)
Translates to: EHLGPPFSFRFPLTHSWVLLSTL*EDKDHP
Trigger: CGGATGGTCTTTGTCTTCTCACAGGGTACTAAGCAG...CACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR TCA 90 bp ACATCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTGGAGCCCTTTGCAGATaGATACTATGGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: TSHGHYPASFSDPETRSAGALCR*ILWAPP
Trigger: TGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCC...AGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp GAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGTGCTGACGGACTTTaGTGGGCGGGTGCTGACGGA +
Preference number: 4 (lower is better)
Translates to: EFSPRDSVLVQVGPGKVPSADGL*WAGADG
Trigger: TCCGTCAGCACCCGCCCATCAAAGTCCGTCAGCACT...TGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAAAGTGGGCAGCCGGGGCTCCAGGCCTTTaGAATTGTGGAGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PSGRACWPSLTMCPKWAAGAPGL*NCGEGK
Trigger: TTTTCCTTCTCCACAATTTCAAAGGCCTGGAGCCCC...GGCTGCCCACTTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR TCA 90 bp CCCGAAGAGGTGCCAGCTGTAGTCTGGTTCTACCAAAAGCACCTAGGTAGCAGCGTGTTCTGGCCGACATaGGCTTTGAGCTTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: PEEVPAVVWFYQKHLGSSVFWPT*ALSFPV
Trigger: GACAGGGAAGCTCAAAGCTCATGTCGGCCAGAACAC...GCTGCTACCTAGGTGCTTTTGGTAGAACCAGACTACAGCTGGCACCTCTTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp AGGGCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCGCCATCATGACAACTTaGACGCCCTTTTCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: RAVLAQGSADRADVKLSPAIMTT*TPFSLP
Trigger: TGGCAAGGAAAAGGGCGTTCAAGTTGTCATGATGGC...GGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS-3UTR GCA 90 bp GAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGAAGCCAGCATTGAGTaGCCCAGCCAGGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: ETQFLCRLGLGKSQAISSEASIE*PSQGEI
Trigger: GATTTCTCCCTGGCTGGGGCACTCAATGCTGGCTTC...TGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp TCGGCTTCATGCATGTTGCTGGACGCCATTGCCTCATACTGCGTGCGGATCTCTAGTGGCCAGGTCCTGTaGCAGATTGTCCCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: SASCMLLDAIASYCVRISSGQVL*QIVPLN
Trigger: GTTGAGAGGGACAATCTGGCACAGGACCTGGCCACT...AGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp GCAGCTCCACTGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCGGCTTCATGCATGTTaGTGGACGCCATTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: AAPLRTQGLTTFTTNKLCRLHAC*WTPLPH
Trigger: ATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCG...GCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCAGTGGAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp CCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGAAGCGTCTGTCAGGTCTaGAAACTTGGAGCGGTACCA +
Preference number: 4 (lower is better)
Translates to: PVLLRHPQGGLLLRLRCGSVCQV*KLGAVP
Trigger: TGGTACCGCTCCAAGTTTGCAGACCTGACAGACGCT...TCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp ACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACCCTGTGAGAAGACAAAGACCAGGTTGGAGAAGGTCTaGACGGGAATGGTGATCCGG +
Preference number: 4 (lower is better)
Translates to: TPEVLVRSCLVPCEKTKTRLEKV*TGMVIR
Trigger: CCGGATCACCATTCCCGTGCAGACCTTCTCCAACCT...GGTCTTTGTCTTCTCACAGGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639042.1
CDS-3UTR GCA 90 bp CTGTGCTCCTGTGGGCATGGGGGCTCCAGGCCTTTGAAATTGTGGAGAAGGAAACATTCTAACGCAAGCTaGTGGCCATGCCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LCSCGHGGSRPLKLWRRKHSNAS*WPCPSR
Trigger: TCTGGAGGGGCATGGCCAGCAGCTTGCGTTAGAATG...TTTCCTTCTCCACAATTTCAAAGGCCTGGAGCCCCCATGCCCACAGGAGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGCCAGTGTCTTCACTTTaGTCGTGCCTCAGTTTTACA +
Preference number: 4 (lower is better)
Translates to: EISLPEHLGPPFSFRFPLPVSSL*SCLSFT
Trigger: TGTAAAACTGAGGCACGAGCAAAGTGAAGACACTGG...CAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GGCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACGTGTTCTCAAGGCCGTaGCCGATGTGGTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: GCGAHPDRLPAHHSSLCHVFSRP*PMWCLV
Trigger: CACAAGACACCACATCGGGCACGGCCTTGAGAACAC...GTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
CDS-3UTR GCA 90 bp TCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATGTGTTCTCAAGGCCGTaGCCGATGTGGTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SPRDSVLVQVGPGKVPSHVFSRP*PMWCLV
Trigger: CACAAGACACCACATCGGGCACGGCCTTGAGAACAC...ATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR GCA 90 bp ACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGTCATCGCCGGATGGCCAGATATaGAGGAGGGTGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TDGIPGWQLRWTETLESSPDGQI*RRVGFL
Trigger: AAGGAAACCCACCCTCCTGCATATCTGGCCATCCGG...CGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp TCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGAGACTCAGTTCTTGTaGAGGTTGGGCCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SEDSGLYFCGTRKGDYFYETQFL*RLGLGK
Trigger: CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTC...GTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGGAGACTCAGTTCTTGTaGAGGTTGGGCCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: DSVLVQVGPGKVPSHQLRETQFL*RLGLGK
Trigger: CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTC...CCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCTTCCTGGGCTGGGCACTaGAGTTCCTGGGAAAATGAC +
Preference number: 4 (lower is better)
Translates to: LAQGSADRADVKLSPSSASWAGH*SSWEND
Trigger: GTCATTTTCCCAGGAACTGCAGTGCCCAGCCCAGGA...AGCAGAACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp AGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGGTGCTGGTTCGGAGCTaGTTAGTACCCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSCAGWAWESPKPSAQVQVLVRS*LVPCEK
Trigger: CTTCTCACAGGGTACTAAGCAGCTCCGAACCAGCAC...CTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp GTGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGGATGACGTGCTGGTTCGGAGCTaGTTAGTACCCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: VFIDHGNQLHIRFTQLDDVLVRS*LVPCEK
Trigger: CTTCTCACAGGGTACTAAGCAGCTCCGAACCAGCAC...GTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp AAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAACAGGTCCGTGCTGGTTCGGAGCTaGTTAGTACCCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KDRQHLYRTQYLKGVNRSVLVRS*LVPCEK
Trigger: CTTCTCACAGGGTACTAAGCAGCTCCGAACCAGCAC...GGACCTGTTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp GTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGGGGAATAAATTGCCTTaGACTTGGCGGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VPTDGIPGWQLRWTETLEGNKLP*TWRLPL
Trigger: CAGAGGAAGCCGCCAAGTGCAAGGCAATTTATTCCC...CTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGTGGGGCAGGACTCCAGTaGCCTTCCCACGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PKDSPPLPLTSSASLMYSGAGLQ*PSHEAL
Trigger: CAGGGCCTCGTGGGAAGGGCACTGGAGTCCTGCCCC...ACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp CGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCGTGCTGGTTCGGAGCTaGTTAGTACCCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: RHADPLQHPHVQLVGFQGVLVRS*LVPSPS
Trigger: GGATGGAGAGGGTACTAAGCAGCTCCGAACCAGCAC...GCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640545.1
CDS-3UTR GCA 90 bp GGGCTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTAGGGGAGGAGTTCCAAACGTCTaGAAGGGGCTTGAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: GLGTAVPGKMTQSRPFRGGVPNV*KGLECY
Trigger: ATAACACTCAAGCCCCTTGCAGACGTTTGGAACTCC...TCCCCTAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS-3UTR CCA 90 bp TCGGCTTCATGCATGTTGCTGGACGCCATTGCCTCATACTGCGTGCGGATCTCTCGAACCTCCTCCTCGTaGATCTTCCTCAAGAACCGG +
Preference number: 4 (lower is better)
Translates to: SASCMLLDAIASYCVRISRTSSS*IFLKNR
Trigger: CCGGTTCTTGAGGAAGATCCACGAGGAGGAGGTTCG...AGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CCA 90 bp GGTGGCTTCATCTGCTTCCTGTCTATAGGCAGCCAGGTTGTTCTCGGCTTCCAGCGAACCTCCTCCTCGTaGATCTTCCTCAAGAACCGG +
Preference number: 4 (lower is better)
Translates to: GGFICFLSIGSQVVLGFQRTSSS*IFLKNR
Trigger: CCGGTTCTTGAGGAAGATCCACGAGGAGGAGGTTCG...CTGGAAGCCGAGAACAACCTGGCTGCCTATAGACAGGAAGCAGATGAAGCCACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR CCA 90 bp CGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCCGAACCTCCTCCTCGTaGATCTTCCTCAAGAACCGG +
Preference number: 4 (lower is better)
Translates to: RHADPLQHPHVQLVGFQGRTSSS*IFLKNR
Trigger: CCGGTTCTTGAGGAAGATCCACGAGGAGGAGGTTCG...GCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp TTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGCGGGCCAGCTGCTCCTaGAGTTCCCGAACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FEVLNFPLETQFLCRLGLRASCS*SSRTSS
Trigger: GGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCG...CAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp GGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATACTTCATGCATGTTGCTaGACGCCATTGCCTCATACT +
Preference number: 4 (lower is better)
Translates to: GKSQAISSGPASLPDGQILHACC*TPLPHT
Trigger: AGTATGAGGCAATGGCGTCCAGCAACATGCATGAAG...TATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp TCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCCTTCATGCATGTTGCTaGACGCCATTGCCTCATACT +
Preference number: 4 (lower is better)
Translates to: SLPVKLGKAPCLRGRQLTLHACC*TPLPHT
Trigger: AGTATGAGGCAATGGCGTCCAGCAACATGCATGAAG...GGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp GCAGCTCCACTGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCTCGAATCTGCAGGTTaGAGAAGGTCTGCACGGGAA +
Preference number: 4 (lower is better)
Translates to: AAPLRTQGLTTFTTNKLCLESAG*RRSARE
Trigger: TTCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAG...GCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCAGTGGAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp CGGGGCATCTACTATTGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTG +
Preference number: 4 (lower is better)
Translates to: RGIYYCWRQGVLVAGFRLMFLLR*PSDTDL
Trigger: CAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACAT...CAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGGCAGAGGCCACCAGGTaGGTCCTGCCTCACATCACA +
Preference number: 4 (lower is better)
Translates to: VPDFPGLTFLDSNHSCLAAEATR*VLPHIT
Trigger: TGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTGC...CGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTGGGAAGTCGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp CCTCCCCATCCCCAACTGTGTCTGCTAGAGTTGGAAGTGAAAGCTACTAACTTTTTGCTGGGTGCTGGGTaGGTGCCGTCTGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPHPQLCLLELEVKATNFLLGAG*VPSGRP
Trigger: AGGCCTGCCAGACGGCACCCACCCAGCACCCAGCAA...AAAGTTAGTAGCTTTCACTTCCAACTCTAGCAGACACAGTTGGGGATGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp AGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGACTTCAGACGTGTGGCAGTaGCTTACTGGGGTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: RPPGGSCLTSHPCAPAWTSDVWQ*LTGVKK
Trigger: CTTCTTAACCCCAGTAAGCCACTGCCACACGTCTGA...AGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp AGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGTCAGTCAAAGCAGAGTaGGTGCACTGGGGTGGACGT +
Preference number: 4 (lower is better)
Translates to: RLSSCAGWAWESPKPSAQSVKAE*VHWGGR
Trigger: ACGTCCACCCCAGTGCACCCACTCTGCTTTGACTGA...CTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp GTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCCAGATGTCTCTGGGTaGGTACCCTCTCCATCCCGC +
Preference number: 4 (lower is better)
Translates to: VELTLIGYLLITAVFVTIPDVSG*VPSPSR
Trigger: GCGGGATGGAGAGGGTACCCACCCAGAGACATCTGG...AATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGGGTGTGACATCTCATaGGCACTACCCAGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RLSSCAGWAWESPKPSAQGCDIS*ALPSLV
Trigger: AACGAGGCTGGGTAGTGCCCATGAGATGTCACACCC...CTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTGGGTGTGACATCTCATaGGCACTACCCAGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: GQRHADPLQHPHVQLVGFGCDIS*ALPSLV
Trigger: AACGAGGCTGGGTAGTGCCCATGAGATGTCACACCC...AAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCGGCATCTACTATTGCTaGAGGCAGGGTGTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: VLVQVGPGKVPSHQLRSSGIYYC*RQGVLV
Trigger: AACTAGCACACCCTGCCTCCAGCAATAGTAGATGCC...GCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp TCCAGGACAAGGGCCAGGAGCCCTTTGCAGATGAATACTATGGGCACCTCCATGCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SRTRARSPLQMNTMGTSMRCGVL*LKGCAK
Trigger: CTTGGCACAGCCCTTGAGCCACAAGACACCACATCG...CATGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCTTGTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGAGATATGCAGGAGGGTaGGTTTCCTTCATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: DSVLVQVGPGKVPSHQLRRYAGG*VSFIPQ
Trigger: CTGGGGGATGAAGGAAACCCACCCTCCTGCATATCT...CCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GTGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGGATGACAGATATGCAGGAGGGTaGGTTTCCTTCATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: VFIDHGNQLHIRFTQLDDRYAGG*VSFIPQ
Trigger: CTGGGGGATGAAGGAAACCCACCCTCCTGCATATCT...GTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GACTACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGCCAGCCAGCCTCCCGGATaGCCAGATATGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: DYFYAYDVDIQNSEGMVASQPPG*PDMQEG
Trigger: ACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCT...GGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GAGGCCAAGTGCAACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCAGTTCTTGTGCAGGTTaGGCCTGGGAAAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: EAKCNWSPTTPTCMPSAISSCAG*AWESPK
Trigger: CTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT...GATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTTGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp AAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAACAGGTCCAGTTCTTGTGCAGGTTaGGCCTGGGAAAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: KDRQHLYRTQYLKGVNRSSSCAG*AWESPK
Trigger: CTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT...GGACCTGTTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp ACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGTCATCGTTCTCTTTCTCTCCCTaGCAAGCAAGGCCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: TDGIPGWQLRWTETLESSFSFSP*QARPPS
Trigger: ACTCGGGGGCCTTGCTTGCCAGGGAGAGAAAGAGAA...CGATGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp GCAGATGAATACTATGGGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCTCTGGGTGGGTACCCTaGGTTGGGACAGGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ADEYYGHLHVFTTFWEWTSGWVP*VGTGGR
Trigger: CCTACCACCTGTCCCAACCCAGGGTACCCACCCAGA...GGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATAGTATTCATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp AACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTCCGGGAGGGCGTGCTaGCCATCATTAACTATGTGT +
Preference number: 4 (lower is better)
Translates to: NQLHIRFTQLDDRGIYYCSGRAC*PSLTMC
Trigger: ACACATAGTTAATGATGGCCAGCACGCCCTCCCGGA...GCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp TTCAGTTCCACCAGCAGAGACTGGGCCATGGACTCATCATCTCCTGTCCTGGGGTCCGGGAGGGCGTGCTaGCCATCATTAACTATGTGT +
Preference number: 4 (lower is better)
Translates to: FSSTSRDWAMDSSSPVLGSGRAC*PSLTMC
Trigger: ACACATAGTTAATGATGGCCAGCACGCCCTCCCGGA...CCCCAGGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGCTGGTGGAACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CCCTGTGAGAAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCATTAACTATCTTCAGGTATGCACCTaGCCCTCACCACTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PCEKTKTIREGVLAIINYLQVCT*PSPLCS
Trigger: GGAGCACAGTGGTGAGGGCCAGGTGCATACCTGAAG...ATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTTCTCACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp GTACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGCCTTTGACCCATTCTTaGGTGAGCGCCAGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: VRVGSDMLTRFSIRMFSLPLTHS*VSASVL
Trigger: TAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGG...CAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp GCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCTGGTATGATAGGCTCTaGCTAGGAGCGCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: ACSGICRQGRCQALTQFCWYDRL*LGALQC
Trigger: ACACTGCAGCGCTCCTAGCCAGAGCCTATCATACCA...GCAGAACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR CAA 72 bp ACCACTCTTCGGCTTCATGCATGTTGCTGGACGCCATaGCCTCATACTGCGTGCGGATCTCTTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TTLRLHACCWTP*PHTACGSLSGL
Trigger: CAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR CAA 72 bp AACTTGGAGCGGTACCACTCTTCGGCTTCATGCATGTaGCTGGACGCCATTGCCTCATACTGCGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: NLERYHSSASCM*LDAIASYCVRI
Trigger: GATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTGGTACCGCTCCAAGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
3UTR CAA 72 bp ACGATGTTCCTCTTGAGGTGGCCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTTCCCTGTCAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TMFLLRWPSDTD*VSRLVFPVKLG
Trigger: GCCCAGCTTGACAGGGAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
3UTR CAA 72 bp ATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTaGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: MLTRFSIRMFSL*VFRAQSEDSGL
Trigger: CAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
3UTR CAA 72 bp GACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTaGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGC +
Preference number: 4 (lower is better)
Translates to: DMLTRFSIRMFS*LVFRAQSEDSG
Trigger: GCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTCTTACTTTTCTCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PRGCVTLGSPRLPRSYFSLEVAF*HRLGVQ
Trigger: CTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAG...AGAAAAGTAAGACCTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR TCA 90 bp TGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGGGTGTGACATCTCATAGCTCTCTTCAGCTCTaGAGACCAGTTGTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: CWRQGVLVAGFRLGVTSHSSLQL*RPVVLQ
Trigger: TTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCT...ATGAGATGTCACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCTCAGTTCCTGGGAAAATaGCGCAGTCCAGGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: LAQGSADRADVKLSPSSAQFLGK*RSPGPL
Trigger: TAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTG...AGCAGAACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp AGGGGAGAGGAGAACCCTGAAGTGGGCCCTCCCAGTCCCATCTCTGGGCACAGATTGCTTTCTTGCCTATaGAGATTGTGCTGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: RGEENPEVGPPSPISGHRLLSCL*RLCWLS
Trigger: ACTCAACCAGCACAATCTTCATAGGCAAGAAAGCAA...TCTGTGCCCAGAGATGGGACTGGGAGGGCCCACTTCAGGGTTCTCCTCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp AGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCGTGTTGAATCATGTTTaGGCTGCTTTGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SSGPASLPDGQICRRVGFVLNHV*AALLSC
Trigger: GCAAGAAAGCAAAGCAGCTCAAACATGATTCAACAC...GAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR TCA 90 bp ACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATCCCTGCTTAGTACCCTGTaGGAAGACAAAGACCATCCG +
Preference number: 4 (lower is better)
Translates to: TSAAPARGTTFTPTMWTSLLSTL*EDKDHP
Trigger: CGGATGGTCTTTGTCTTCTCACAGGGTACTAAGCAG...GGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp CCACTTTCCAGGACAAGGGCCAGGAGCCCTTTGCAGATGAATACTATGGGCACCGGACATCCAGAACAGTaGGGGAATGGTGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: PLSRTRARSPLQMNTMGTGHPEQ*GNGGHF
Trigger: AAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCC...GGTGCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCTTGTCCTGGAAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR TCA 90 bp TTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCTTTCAGGGCTCAGTCTaGGGACTCAGGCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: FPLETQFLCRLGLGKSQAFQGSV*GLRPVL
Trigger: AAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAA...GGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR TCA 90 bp AGGAGCCCTTTGCAGATGAATACTATGGGCACCTCCATGTCTTCACCACCTTCTGCCACACCAAAGTGCTaGCGGACTTTGATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RSPLQMNTMGTSMSSPPSATPKC*RTLMGG
Trigger: CCCGCCCATCAAAGTCCGTCAGCACTTTGGTGTGGC...AGAAGGTGGTGAAGACATGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp TGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTGGGGCTCCAGGCCTTTaGAATTGTGGAGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: CGQRHADPLQHPHVQLVGGAPGL*NCGEGK
Trigger: TTTTCCTTCTCCACAATTTCAAAGGCCTGGAGCCCC...ACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp GGGACTACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGGATCTCTTTCAGGGCTaGGGTGAGGTCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GTTFTPTMWTSRTVREWWDLFQG*GEVWLG
Trigger: GCCAAGCCAGACCTCACCGCAGCCCTGAAAGAGATC...CCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp AGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCTTGCCTCATACTGCGTaGGGATCTCTTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RDSVLVQVGPGKVPSHQLLPHTA*GSLSGL
Trigger: CAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAA...GAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp GTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCTGCTCGCGCATCTaGCTCTCCAGGGACTCGTTC +
Preference number: 4 (lower is better)
Translates to: VLNFPLETQFLCRLGLGKSCSRI*LSRDSF
Trigger: GAACGAGTCCCTGGAGAGGCAGATGCGCGAGCAGGA...CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp GTGGACAAATCTGTTACAGCCTGCTCCCCATTTTCATGGGCAGGTCTGGGACCTAGGTTGGAGAAGGTCTaGACGGGAATGGTGATCCGG +
Preference number: 4 (lower is better)
Translates to: VDKSVTACSPFSWAGLGPRLEKV*TGMVIR
Trigger: CCGGATCACCATTCCCGTGCAGACCTTCTCCAACCT...AGGTCCCAGACCTGCCCATGAAAATGGGGAGCAGGCTGTAACAGATTTGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR GCA 90 bp AACAGTTTCCATAACAACAGGAATCAGGGATGTGGAGGGCGATGTAGTAGGTGCCACCTGCCCACAGCGTaGCCACAGATGGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: NSFHNNRNQGCGGRCSRCHLPTA*PQMASL
Trigger: CAGGGATGCCATCTGTGGGCACGCTGTGGGCAGGTG...GCACCTACTACATCGCCCTCCACATCCCTGATTCCTGTTGTTATGGAAACTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp AGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAATCCAGAGGCCAAGTaGAACTGGTCACCCACAACC +
Preference number: 4 (lower is better)
Translates to: RDSVLVQVGPGKVPSHQLNPEAK*NWSPTT
Trigger: GGTTGTGGGTGACCAGTTGCACTTGGCCTCTGGATT...GAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CCCTCCAGACTGCCCCTTGGGGGTGAGTTTCTTGTTAGTTGGAGTTGCTGGGTGAATGGGACAAAGTCATaGCCTGCCCCCATGGATACA +
Preference number: 4 (lower is better)
Translates to: PSRLPLGGEFLVSWSCWVNGTKS*PAPMDT
Trigger: TGTATCCATGGGGGCAGGGCATGACTTTGTCCCATT...CACCCAGCAACTCCAACTAACAAGAAACTCACCCCCAAGGGGCAGTCTGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp GCCTTTAGAAATGGGACAAAGTCATGCCCTGCCCCCATGGATACATCCCCTTTCACCCGGCCTCCAGGCTaGAGGAATATGAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: AFRNGTKSCPAPMDTSPFTRPPG*RNMSQC
Trigger: ACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGT...GAAAGGGGATGTATCCATGGGGGCAGGGCATGACTTTGTCCCATTTCTAAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp TCACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGAGTCTGCTCACCAGTCTaGTCAGTCAAAGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SLWGGEGQTCGSGLLGLRVCSPV*SVKAEW
Trigger: CCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGAC...TCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp ATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGCCGGATGGCCAGATATaGAGGAGGGTGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: IRMFSLLVFRAQSEDSGLPDGQI*RRVGFL
Trigger: AAGGAAACCCACCCTCCTGCATATCTGGCCATCCGG...CAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CTCTATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGCTGGTTTCTCGAATCTaGAGGTTGGAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LYPSQHLIPLHVHNRSPKLVSRI*RLEKVC
Trigger: GCAGACCTTCTCCAACCTGCAGATTCGAGAAACCAG...CTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGATAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp TCCACGTACACAACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTGCCCAGGAGCTACTGGGAGTTaGTGGGAACCTTCTATGTGC +
Preference number: 4 (lower is better)
Translates to: STYTTDPPSAENQAPTCPGATGS*WEPSMC
Trigger: GCACATAGAAGGTTCCCAGCAACTCCCAGTAGCTCC...TGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGTTGTGTACGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR GCA 90 bp CCCTGTGAGAAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCATTAACTATCCATCCGGGAGGGCGTaGTGGCCATCATTAACTATG +
Preference number: 4 (lower is better)
Translates to: PCEKTKTIREGVLAIINYPSGRA*WPSLTM
Trigger: CATAGTTAATGATGGCCAGCACGCCCTCCCGGATGG...ATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTTCTCACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp AAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAACAGGTCCTTTCAGAGGACCCCCTaGCCTGCTTTCCTGATGTTT +
Preference number: 4 (lower is better)
Translates to: KDRQHLYRTQYLKGVNRSFQRTP*PAFLMF
Trigger: AAACATCAGGAAAGCAGGGCAGGGGGTCCTCTGAAA...GGACCTGTTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp TATGGGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTCCTCTGCAGATTGTTaGTGCTTTTCCTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: YGHLHVFTTFWEWTPCDRSSADC*CFSWLH
Trigger: ATGCAGCCAGGAAAAGCAGCAACAATCTGCAGAGGA...GCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp CTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATCCAGAACTTGGCGGCTTCCTCTaGAGATTGTTGCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LRHPQGGLLLRLRCGHPELGGFL*RLLLLF
Trigger: GAAAAGCAGCAACAATCTGCAGAGGAAGCCGCCAAG...TTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp ACATCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTCCACTGGGAATAAATTaGCTTGCACTTGGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: TSHGHYPASFSDPETRSAPLGIN*LALGGF
Trigger: GAAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGG...AGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp CCCTCCAGACTGCCCCTTGGGGGTGAGTTTCTTGTTAGTTGGAGTTGCTGGGTGAGGTTGGTTTCATCCTaGAGCTTCTGCCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: PSRLPLGGEFLVSWSCWVRLVSS*SFCLTV
Trigger: CACTGTGAGGCAGAAGCTCCAGGATGAAACCAACCT...CACCCAGCAACTCCAACTAACAAGAAACTCACCCCCAAGGGGCAGTCTGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp AGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGAGGTTGGTTTCATCCTaGAGCTTCTGCCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: SSCAGWAWESPKPSAQVQRLVSS*SFCLTV
Trigger: CACTGTGAGGCAGAAGCTCCAGGATGAAACCAACCT...CTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp CGGCTTCATGCATGTTGCTGGACGCCATTGCCTCATACTGCGTGCGGATCTCTTTCAGGTCTGCAAACTTaGAGCGGTACCACTCTTCGG +
Preference number: 4 (lower is better)
Translates to: RLHACCWTPLPHTACGSLSGLQT*SGTTLR
Trigger: CCGAAGAGTGGTACCGCTCCAAGTTTGCAGACCTGA...AAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CCA 90 bp GGCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCTCGAATCTGCAGGTTaGAGAAGGTCTGCACGGGAA +
Preference number: 4 (lower is better)
Translates to: GCGAHPDRLPAHHSSLCHLESAG*RRSARE
Trigger: TTCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAG...GTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639042.1
CDS-3UTR CCA 90 bp TCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGAGACACTGGTGAGCCTGTATTaGTATAACTCGTATTGTGAG +
Preference number: 4 (lower is better)
Translates to: SRHSETQGALPVTGRGETLVSLY*YNSYCE
Trigger: CTCACAATACGAGTTATACCAATACAGGCTCACCAG...TGTCTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp CTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTG +
Preference number: 4 (lower is better)
Translates to: LRTQACTSAAPARGTTFTMFLLR*PSDTDL
Trigger: CAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACAT...CGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000640859.1
CDS-3UTR CCA 90 bp ATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGTGCTCCTCTGAGCTGGGCATaGTGGCTCCAATCTATAATC +
Preference number: 4 (lower is better)
Translates to: IPPSTSSLSTYTTDPPSAPLSWA*WLQSII
Trigger: GATTATAGATTGGAGCCACCATGCCCAGCTCAGAGG...AGCACTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp CTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACCCTCTGAGCTGGGCATaGTGGCTCCAATCTATAATC +
Preference number: 4 (lower is better)
Translates to: LYFCGTRKGDYFYAYDVDPLSWA*WLQSII
Trigger: GATTATAGATTGGAGCCACCATGCCCAGCTCAGAGG...GTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp GAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAGATGGCATCCCTGGATaGCAGCTCAGGTGGACTGAG +
Preference number: 4 (lower is better)
Translates to: EFSPRDSVLVQVGPGKVPDGIPG*QLRWTE
Trigger: CTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATC...TGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp AGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGCAGAGTGGGTGCACTaGGGTGGACGTGTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RLCNLGKSPTSQVLLFLIAEWVH*GGRVSP
Trigger: AGGGCTGACACGTCCACCCCAGTGCACCCACTCTGC...TATCAAGAAAAGTAAGACCTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp AAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAAAGGGTGTGCTAGTTGCTaGCTTCCGGCTGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: KTKTIREGVLAIINYVSKGCASC*LPAGCD
Trigger: GTCACACCCAGCCGGAAGCCAGCAACTAGCACACCC...TTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGGGTGTGCTAGTTGCTaGCTTCCGGCTGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GVEFSPRDSVLVQVGPGKGCASC*LPAGCD
Trigger: GTCACACCCAGCCGGAAGCCAGCAACTAGCACACCC...TTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGCCACTTTCCAGGACACGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PTMWTSRTVREWWPLSRTRCGVL*LKGCAK
Trigger: CTTGGCACAGCCCTTGAGCCACAAGACACCACATCG...TGTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp CTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCAGATATGCAGGAGGGTaGGTTTCCTTCATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LETQFLCRLGLGKSQAISRYAGG*VSFIPQ
Trigger: CTGGGGGATGAAGGAAACCCACCCTCCTGCATATCT...GCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAAGCCAGCCTCCCGGATaGCCAGATATGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GVEFSPRDSVLVQVGPGKSQPPG*PDMQEG
Trigger: ACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCT...TTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CTCCCCCTAGGAGCTCTCTTCAGCTCTGAAGACCAGTTGTCCTTCAATGTGTTTAGCCAGCCTCCCGGATaGCCAGATATGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LPLGALFSSEDQLSFNVFSQPPG*PDMQEG
Trigger: ACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCT...AAACACATTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCTCCTAGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTAGCCAGCCTCCCGGATaGCCAGATATGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: ATCSSQQSLSPFTSVVAASQPPG*PDMQEG
Trigger: ACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCT...AGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp ACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTAGCCAGCCTCCCGGATaGCCAGATATGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: TCSSQQSLSPFTSVVAAASQPPG*PDMQEG
Trigger: ACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCT...AGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGAGCCAGCCTCCCGGATaGCCAGATATGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PDRLPAHHSSLCHHSLLSSQPPG*PDMQEG
Trigger: ACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCT...CGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGAGTTCTTGTGCAGGTTaGGCCTGGGAAAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: RLSSCAGWAWESPKPSAQSSCAG*AWESPK
Trigger: CTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT...CTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGGCCTTGAGAATCCCTaGGGCCAGCCAGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: RLCNLGKSPTSQVLLFLIGLENP*GQPEPD
Trigger: GTCAGGCTCTGGCTGGCCCCAGGGATTCTCAAGGCC...TATCAAGAAAAGTAAGACCTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp ACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGAAGCGAGTGGTAAGCTGCTaGAGTAAGATGAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: TMGWRGSDVWQWLTGVKKRVVSC*SKMSSH
Trigger: GTGGGAGCTCATCTTACTCCAGCAGCTTACCACTCG...CTTCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CCA 90 bp GAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGACCAGATGTCTCTGGGTaGGTACCCTGGGTTGGGACA +
Preference number: 4 (lower is better)
Translates to: EVLNFPLETQFLCRLGLGPDVSG*VPWVGT
Trigger: TGTCCCAACCCAGGGTACCCACCCAGAGACATCTGG...TCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp CGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCCACCAGCAGAGACTaGGCCATGGACTCATCATCT +
Preference number: 4 (lower is better)
Translates to: RHADPLQHPHVQLVGFQGSTSRD*AMDSSS
Trigger: AGATGATGAGTCCATGGCCCAGTCTCTGCTGGTGGA...GCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp ACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTAGAACAGTGAGGGAATaGTGGCCACTTTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: TCGQRHADPLQHPHVQLVRTVRE*WPLSRT
Trigger: TGTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCT...AACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTATTTACGCCTACGATGTaGACATCCAGAACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GLRPVLLRHPQGGLLLRLFTPTM*TSRTVR
Trigger: CCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAA...TAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp CACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTGGAGGCAGGTGCCAGCTGTAGTCTaGTTCTACCAAAAGCACCTA +
Preference number: 4 (lower is better)
Translates to: HIRFTQLDDRGIYYCWRQVPAVV*FYQKHL
Trigger: TAGGTGCTTTTGGTAGAACCAGACTACAGCTGGCAC...CTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAAAGTGGGCAGCCAAATTGCCTTGCACTTaGCGGCTTCCTCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: PSGRACWPSLTMCPKWAAKLPCT*RLPLQI
Trigger: AATCTGCAGAGGAAGCCGCCAAGTGCAAGGCAATTT...GGCTGCCCACTTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp TGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACACCTTTGACCCATTCTTaGGTGAGCGCCAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: CTSAAPARGTTFTPTMWTPLTHS*VSASVL
Trigger: CAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGG...TGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639243.1
3UTR CAA 72 bp GAGCTGGTGTATGTCCTCTTTGGCTGCGGGTGGAATTaGGTGAGGGCATGGGCCCCAGAGATGATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: ELVYVLFGCGWN*VRAWAPEMISN
Trigger: ATTACTGATCATCTCTGGGGCCCATGCCCTCACCAAATTCCACCCGCAGCCAAAGAGGACATACACCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp GGCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTATCTTGTGACCTTGTaGTTTTCCCCGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GSACSGICRQGRCQALTQYLVTL*FSPSLV
Trigger: CACCAAAGACGGGGAAAATCACAAGGTCACAAGATA...CTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp CAGGGCCTAGCAGGACAGGGGCAGCTGCAAGCCCCACCTAGAAGTACCCTGGTACCATTTACAATCTGGTaGGCCTGTATTGGTATAACT +
Preference number: 4 (lower is better)
Translates to: QGLAGQGQLQAPPRSTLVPFTIW*ACIGIT
Trigger: AGTTATACCAATACAGGCTCACCAGATTGTAAATGG...TACCAGGGTACTTCTAGGTGGGGCTTGCAGCTGCCCCTGTCCTGCTAGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp GTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGCCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: VPDFPGLTFLDSNHSCLAPRCSS*GGLLTQ
Trigger: CTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGG...CGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTGGGAAGTCGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR TCA 90 bp GCAGATGAATACTATGGGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: ADEYYGHLHVFTTFWEWTPRCSS*GGLLTQ
Trigger: CTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGG...GGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATAGTATTCATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR TCA 90 bp GAGAGAACCTCCATCTCTGGCAACAGTTTCCATAACAACAGGAATCAGGGATGTTGGGGCGGCCTGGTATaGCACAGCAAGGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ERTSISGNSFHNNRNQGCWGGLV*HSKEEA
Trigger: GGCCTCTTCCTTGCTGTGTCATACCAGGCCGCCCCA...ACATCCCTGATTCCTGTTGTTATGGAAACTGTTGCCAGAGATGGAGGTTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR TCA 90 bp CCTCCAGACTGCCCCTTGGGGGTGAGTTTCTTGTTAGTTGGAGTTGCTGGGTGCGGTACATTTTGTGTGTaGGTAAGAAGGGACCGCAAG +
Preference number: 4 (lower is better)
Translates to: PPDCPLGVSFLLVGVAGCGTFCV*VRRDRK
Trigger: CTTGCGGTCCCTTCTTACTCACACACAAAATGTACC...GCACCCAGCAACTCCAACTAACAAGAAACTCACCCCCAAGGGGCAGTCTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR TCA 90 bp TCCACGTACACAACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTGCCCACAGGCTGCAGGAATATaGGCCAGTGTCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: STYTTDPPSAENQAPTCPQAAGI*ASVFTL
Trigger: CAAAGTGAAGACACTGGCTCATATTCCTGCAGCCTG...TGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGTTGTGTACGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR TCA 90 bp AGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTACTTATTTCACTGTTGTGGACGTGTCAGCCCTaGGCACCCGGCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLCHHSLLSLLLLLISLLWTCQP*APGLQA
Trigger: AGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCA...CAACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp ACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTGCAGCAGCAGTGCCCTaGAGATTAGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TCSSQQSLSPFTSVVAAAAAAVP*RLAAAA
Trigger: TGCTGCTGCTGCTAATCTTCAGGGCACTGCTGCTGC...AGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp AACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCAGCTCTCTTCAGCTCTaGAGACCAGTTGTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: NQLHIRFTQLDDRGIYYCSSLQL*RPVVLQ
Trigger: TTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCT...GCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp ATGAGGGTGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGAGCTCTCTTCAGCTCTaGAGACCAGTTGTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: MRVFIDHGNQLHIRFTQLSSLQL*RPVVLQ
Trigger: TTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCT...CAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACACCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCTTGCTTTCTTGCCTATaGAGATTGTGCTGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: AWDKDRQHLYRTQYLKGVLLSCL*RLCWLS
Trigger: ACTCAACCAGCACAATCTTCATAGGCAAGAAAGCAA...GACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR TCA 90 bp TCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCCAGAGAAGGAAAGTGTaGACTCAGATTTATCCAGTG +
Preference number: 4 (lower is better)
Translates to: SMSSPPSGNGPPVTAAECQRRKV*TQIYPV
Trigger: CACTGGATAAATCTGAGTTCACACTTTCCTTCTCTG...GCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp GTGGACAAATCTGTTACAGCCTGCTCCCCATTTTCATGGGCAGGTCTGGGACCTGGACATCCAGAACAGTaGGGGAATGGTGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: VDKSVTACSPFSWAGLGPGHPEQ*GNGGHF
Trigger: AAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCC...AGGTCCCAGACCTGCCCATGAAAATGGGGAGCAGGCTGTAACAGATTTGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp ATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTTTCAGGGCTCAGTCTaGGGACTCAGGCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: IRMFSLLVFRAQSEDSGLFQGSV*GLRPVL
Trigger: AAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAA...CAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTTTCTAGGAGCCCTATaGGCCTTTAATGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: DSVLVQVGPGKVPSHQLRFLGAL*AFNALV
Trigger: AACCAGGGCATTAAAGGCTCATAGGGCTCCTAGAAA...CCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp GAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAGTGGCCAGGTCCTGTaGCAGATTGTCCCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: EVLNFPLETQFLCRLGLGSGQVL*QIVPLN
Trigger: GTTGAGAGGGACAATCTGGCACAGGACCTGGCCACT...TCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp CGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTTGCCTCATACTGCGTaGGGATCTCTTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RFSIRMFSLLVFRAQSEDLPHTA*GSLSGL
Trigger: CAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAA...GTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp TTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCCACTCTTCGGCTTCATaGATGTTGCTGGACGCCATT +
Preference number: 4 (lower is better)
Translates to: FPLETQFLCRLGLGKSQAHSSAS*MLLDAI
Trigger: AATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTG...GGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp CGTCATGCCTGGCGAGTGGTAAGCTGCTGGAGTAAGATGAGCTCCCACTGTGGTACATCCTTGTGCTCCTaGTTGGACTCCTTAATGACC +
Preference number: 4 (lower is better)
Translates to: RHAWRVVSCWSKMSSHCGTSLCS*LDSLMT
Trigger: GGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGT...ACCACAGTGGGAGCTCATCTTACTCCAGCAGCTTACCACTCGCCAGGCATGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR GCA 90 bp AAGTGCAACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTGACAAAGTCATGCCCTaGCCCCATGGATACATCCCC +
Preference number: 4 (lower is better)
Translates to: KCNWSPTTPTCMPSAIPIDKVMP*PHGYIP
Trigger: GGGGATGTATCCATGGGGGCAGGGCATGACTTTGTC...AATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp GCCTTTAGAAATGGGACAAAGTCATGCCCTGCCCCCATGGATACATCCCCTTTCCAGATCCCACCAGTCTaGTCACCAGTCTGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: AFRNGTKSCPAPMDTSPFQIPPV*SPVCSV
Trigger: GACTGAGCAGACTGGTGAGCAGACTGGTGGGATCTG...GAAAGGGGATGTATCCATGGGGGCAGGGCATGACTTTGTCCCATTTCTAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp GCAAACTTGGAGCGGTACCACTCTTCGGCTTCATGCATGTTGCTGGACGCCATTTTCATCTGCTTCTTCTaGCTCACAGTGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ANLERYHSSASCMLLDAIFICFF*LTVARS
Trigger: GGACCTGGCCACTGTGAGGCAGAAGAAGCAGATGAA...AATGGCGTCCAGCAACATGCATGAAGCCGAAGAGTGGTACCGCTCCAAGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR GCA 90 bp GAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGACGGGGCATCTACTATTaGTGGAGGCAGGGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: EVLNFPLETQFLCRLGLGRGIYY*WRQGVL
Trigger: TAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCG...TCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCA +
Preference number: 4 (lower is better)
Translates to: FEVLNFPLETQFLCRLGLVAQGL*QGSCGP
Trigger: TGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCAC...CAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp ACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGAGGCAGAGATCTCCCTaGCCGAGCACCTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TSFEVLNFPLETQFLCRLRQRSP*PSTSAR
Trigger: GCGGGCCGAGGTGCTCGGGCAGGGAGATCTCTGCCT...CAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCCTGGTTTCTCGAATCTaGAGGTTGGAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: FPLETQFLCRLGLGKSQALVSRI*RLEKVC
Trigger: GCAGACCTTCTCCAACCTGCAGATTCGAGAAACCAG...GGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639277.1
CDS-3UTR GCA 90 bp AGGGCCAGGAGCCCTTTGCAGATGAATACTATGGGCACCTCCATGTCTTCACCAGTGCTGGTTCGGAGCTaGTTAGTACCCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RARSPLQMNTMGTSMSSPVLVRS*LVPCEK
Trigger: CTTCTCACAGGGTACTAAGCAGCTCCGAACCAGCAC...TGGTGAAGACATGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR GCA 90 bp CATCCACTGGGAATAAATTGCCTTGCACTTGGCGGCTTCCTCTGCAGATTGTTGGCTACCTCAAGGCCGTaGCCGATGTGGTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: HPLGINCLALGGFLCRLLATSRP*PMWCLV
Trigger: CACAAGACACCACATCGGGCACGGCCTTGAGGTAGC...CAACAATCTGCAGAGGAAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp GGGACTACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGGAGCTTCCCTGTCACTaGAAACCCGAAGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GTTFTPTMWTSRTVREWWELPCH*KPEEVP
Trigger: TGGCACCTCTTCGGGTTTGCAGTGACAGGGAAGCTC...CCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR GCA 90 bp GGGACAGGTGGTAGGAACATGTGGACAAATCTGTTACAGCCTGCTCCCCATTTTTGCCTCCTTCAGGTATaGACCTGGCCCTCACCACTG +
Preference number: 4 (lower is better)
Translates to: GTGGRNMWTNLLQPAPHFCLLQV*TWPSPL
Trigger: CAGTGGTGAGGGCCAGGTGCATACCTGAAGGAGGCA...AAAATGGGGAGCAGGCTGTAACAGATTTGTCCACATGTTCCTACCACCTGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp CTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAATCCTCTGCAGATTGTTaGTGCTTTTCCTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LGQRPPAPLPHTVPEGCQSSADC*CFSWLH
Trigger: ATGCAGCCAGGAAAAGCAGCAACAATCTGCAGAGGA...TTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp ACTGTGCTCCTGTGGGCATGGGGGCTCCAGGCCTTTGAAATTGTGGAGAAGGAACTTGGCGGCTTCCTCTaGAGATTGTTGCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: TVLLWAWGLQAFEIVEKELGGFL*RLLLLF
Trigger: GAAAAGCAGCAACAATCTGCAGAGGAAGCCGCCAAG...TTCCTTCTCCACAATTTCAAAGGCCTGGAGCCCCCATGCCCACAGGAGCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp ACGTCCTGGGCTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTCTGGTGAGCCTGTATTaGTATAACTCGTATTGTGAG +
Preference number: 4 (lower is better)
Translates to: TSWAGHCSSWENDAVQALLVSLY*YNSYCE
Trigger: CTCACAATACGAGTTATACCAATACAGGCTCACCAG...AAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAGCCCAGGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp CTCTATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTG +
Preference number: 4 (lower is better)
Translates to: LYPSQHLIPLHVHNRSPKMFLLR*PSDTDL
Trigger: CAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACAT...CTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGATAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp ACATCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTG +
Preference number: 4 (lower is better)
Translates to: TSHGHYPASFSDPETRSAMFLLR*PSDTDL
Trigger: CAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACAT...AGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp TCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTGACAAAACAAGCCTCTaGCCAGGGCTACCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SACSACWFSGLSLRTQACDKTSL*PGLPCL
Trigger: CAGACAAGGTAGCCCTGGCCAGAGGCTTGTTTTGTC...ACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp TGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCAACAGCTTCTGACACAGACTTaGTGTCCAGGCTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: CLDSLMTCRGQGTCTVQQLLTQT*CPGWFS
Trigger: GGAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAG...CTGTTGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR CCA 90 bp GCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACTACCACGTCCTGGGCTaGGCACTGCAGTTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: APKDSPPLPLTSSASLMYYHVLG*ALQFLG
Trigger: TCCCAGGAACTGCAGTGCCCAGCCCAGGACGTGGTA...GTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp CGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTATACCACGTCCTGGGCTaGGCACTGCAGTTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RTQGLTTFTTNKLCQFNVYHVLG*ALQFLG
Trigger: TCCCAGGAACTGCAGTGCCCAGCCCAGGACGTGGTA...TACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp CCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTTCTGACACAGACTTaGTGTCCAGGCTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: PRDSVLVQVGPGKVPSHQLLTQT*CPGWFL
Trigger: GAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAG...CTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR CCA 90 bp TCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCTTCTGACACAGACTTaGTGTCCAGGCTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SPRDSVLVQVGPGKVPSHLLTQT*CPGWFL
Trigger: GAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAG...ATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR CCA 90 bp GGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGTGGTGGACAGAGGGGTCCTCCAGAATTCCCTaGGGAGCTACTGGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: GLTFLDSNHSCLAWWTEGSSRIP*GATGSC
Trigger: GCAACTCCCAGTAGCTCCCCAGGGAATTCTGGAGGA...CCCCTCTGTCCACCACGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp CCTCCCCATCCCCAACTGTGTCTGCTAGAGTTGGAAGTGAAAGCTACTAACTTTAGCTCCCACTGTGGTTaGAGTGGCGTGGCGGATACG +
Preference number: 4 (lower is better)
Translates to: PPHPQLCLLELEVKATNFSSHCG*SGVADT
Trigger: CGTATCCGCCACGCCACTCCAACCACAGTGGGAGCT...AAAGTTAGTAGCTTTCACTTCCAACTCTAGCAGACACAGTTGGGGATGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp CCTCCCCATCCCCAACTGTGTCTGCTAGAGTTGGAAGTGAAAGCTACTAACTTTAGCTGCCTTGCGTGGTaGACAGAGGGGGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PPHPQLCLLELEVKATNFSCLAW*TEGVVR
Trigger: TCTCACCACCCCCTCTGTCCACCACGCAAGGCAGCT...AAAGTTAGTAGCTTTCACTTCCAACTCTAGCAGACACAGTTGGGGATGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp ATCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGAGGTGGTAGGAACATGTaGACAAATCTGTTACAGCCT +
Preference number: 4 (lower is better)
Translates to: IPQVDERLFHQAGRAGPGGGRNM*TNLLQP
Trigger: AGGCTGTAACAGATTTGTCCACATGTTCCTACCACC...TCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CCA 90 bp CTCTACCGCACACAGTACCTGAAGGGTGTCAACAGGTCCATGAGGGTGTTCATTGCAGAGACTGGGCCATaGACTCATCATCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LYRTQYLKGVNRSMRVFIAETGP*THHLLS
Trigger: GGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGC...AATGAACACCCTCATGGACCTGTTGACACCCTTCAGGTACTGTGTGCGGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATCCAGAACAGCATGTTCAGCTTGTTaGTTTTCAGGGCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: AAPARGTTFTPTMWTSRTACSAC*FSGLSL
Trigger: CAGACTGAGCCCTGAAAACCAACAAGCTGAACATGC...TGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp CTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATCCAGAAGCATGTTCAGCTTGTTaGTTTTCAGGGCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LRHPQGGLLLRLRCGHPEACSAC*FSGLSL
Trigger: CAGACTGAGCCCTGAAAACCAACAAGCTGAACATGC...TTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGGTGCCAGCTGTAGTCTaGTTCTACCAAAAGCACCTA +
Preference number: 4 (lower is better)
Translates to: DSVLVQVGPGKVPSHQLRVPAVV*FYQKHL
Trigger: TAGGTGCTTTTGGTAGAACCAGACTACAGCTGGCAC...CCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCCCTTTGACCCATTCTTaGGTGAGCGCCAGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: RDSVLVQVGPGKVPSHQLPLTHS*VSASVL
Trigger: TAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGG...GAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp ATGAGCTTTGAGCTTCCCTGTCACTGCAAACCCGAAGAGGTGCCAGCTGTAGTCCCTTTGACCCATTCTTaGGTGAGCGCCAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: MSFELPCHCKPEEVPAVVPLTHS*VSASVL
Trigger: CAGAACACTGGCGCTCACCCAAGAATGGGTCAAAGG...GACTACAGCTGGCACCTCTTCGGGTTTGCAGTGACAGGGAAGCTCAAAGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639243.1
ENST00000640859.1
3UTR CAA 72 bp CTTGGGAAGTCCCCGACTTCCCAGGTCTTACTTTTCTaGATAGTAACCACAGCTGCCTTGCGTGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: LGKSPTSQVLLF*IVTTAALRGGQ
Trigger: CTGTCCACCACGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTGGGAAGTCGGGGACTTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
3UTR CAA 72 bp GGAGGGACTGAGGAAACGGAATTACATTCAGTTTCCTaGCTCTCCTCCAGAATTCCCTGGGGAGCTACTGGG +
Preference number: 4 (lower is better)
Translates to: GGTEETELHSVS*LSSRIPWGATG
Trigger: CCCAGTAGCTCCCCAGGGAATTCTGGAGGAGAGCAAGGAAACTGAATGTAATTCCGTTTCCTCAGTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR TCA 90 bp GTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VLNFPLETQFLCRLGLGKLEVAF*HRLGVQ
Trigger: CTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAG...CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR TCA 90 bp AGGAGCCCTTTGCAGATGAATACTATGGGCACCTCCATGTCTTCACCACCTTCTCATGAGGGTGTTCATTaGCCACGGCAACCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RSPLQMNTMGTSMSSPPSHEGVH*PRQPAP
Trigger: TGGAGCTGGTTGCCGTGGTCAATGAACACCCTCATG...AGAAGGTGGTGAAGACATGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp CTCCCCCTAGGAGCTCTCTTCAGCTCTGAAGACCAGTTGTCCTTCAATGTGTTTCATGAGGGTGTTCATTaGCCACGGCAACCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPLGALFSSEDQLSFNVFHEGVH*PRQPAP
Trigger: TGGAGCTGGTTGCCGTGGTCAATGAACACCCTCATG...AAACACATTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCTCCTAGGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp GGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTTGCTTTCCTGATGTTTaGAAATGCAGCCTACCTGGC +
Preference number: 4 (lower is better)
Translates to: GQRHADPLQHPHVQLVGFCFPDV*KCSLPG
Trigger: GCCAGGTAGGCTGCATTTTCAAACATCAGGAAAGCA...AAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR TCA 90 bp GTCTGGTTCTACCAAAAGCACCTAGGTAGCAGCCACACCAAAGTGCTGACGGACCCTGCCCTGCTTTCCTaGTGTTTGAAAATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VWFYQKHLGSSHTKVLTDPALLS*CLKMQP
Trigger: AGGCTGCATTTTCAAACATCAGGAAAGCAGGGCAGG...GTCCGTCAGCACTTTGGTGTGGCTGCTACCTAGGTGCTTTTGGTAGAACCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR TCA 90 bp GCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACTGGATCCCTTTGCCCTaGTCCTCAGTCCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: APKDSPPLPLTSSASLMYWIPLP*SSVPVW
Trigger: CCAGACTGGGACTGAGGATCAGGGCAAAGGGATCCA...GTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp ATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGAATGGGACAAAGTCATaGCCTGCCCCCATGGATACA +
Preference number: 4 (lower is better)
Translates to: IRMFSLLVFRAQSEDSGLNGTKS*PAPMDT
Trigger: TGTATCCATGGGGGCAGGGCATGACTTTGTCCCATT...CAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GGGCATCTACTATTGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGGGTTCTGTCGTTGCTGCTaGTACTTATTTCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: GHLLLLEAGCASCWLPAGFCRCC*YLFHCC
Trigger: ACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAA...CCCAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAGTAGATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGCGGGGCATCTACTATTaGTGGAGGCAGGGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: PDRLPAHHSSLCHHSLLSRGIYY*WRQGVL
Trigger: TAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCG...CGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGCGGGGCATCTACTATTaGTGGAGGCAGGGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: VLNFPLETQFLCRLGLGKRGIYY*WRQGVL
Trigger: TAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCG...CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTGAGACTCAGTTCTTGTaGAGGTTGGGCCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ASASACSACWFSGLSLRTETQFL*RLGLGK
Trigger: CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTC...AGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTCTGGTTTCTCGAATCTaGAGGTTGGAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LTRFSIRMFSLLVFRAQSLVSRI*RLEKVC
Trigger: GCAGACCTTCTCCAACCTGCAGATTCGAGAAACCAG...AGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp CCACCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTGCACTGGGGTTACATTCAGTTTCCTTaGTCTCCTCCAGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: PPVCSPVCSVKAEWVHWGYIQFP*SPPEFP
Trigger: AGGGAATTCTGGAGGAGAGCAAGGAAACTGAATGTA...ACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR GCA 90 bp GCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACCAGGACAGGGGCAGCTaGAAGCCCCACCTAGAAGTA +
Preference number: 4 (lower is better)
Translates to: APKDSPPLPLTSSASLMYQDRGS*KPHLEV
Trigger: TACTTCTAGGTGGGGCTTGCAGCTGCCCCTGTCCTG...GTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp GGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGTGGTGGACAGAGGGGCTCGAATCTGCAGGTTaGAGAAGGTCTGCACGGGAA +
Preference number: 4 (lower is better)
Translates to: GLTFLDSNHSCLAWWTEGLESAG*RRSARE
Trigger: TTCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAG...CCCCTCTGTCCACCACGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp GGCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTG +
Preference number: 4 (lower is better)
Translates to: GCGAHPDRLPAHHSSLCHMFLLR*PSDTDL
Trigger: CAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACAT...GTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp CACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGACACTACCTAGAATACTaGGTACATTTTGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: HLHVFTTFWEWTPCDRCGHYLEY*VHFVCE
Trigger: CTCACACACAAAATGTACCCAGTATTCTAGGTAGTG...TCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp TGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTTGTGCAGGTTGGGCCTaGGAAAGTCCCAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: CSACWFSGLSLRTQACTSCAGWA*ESPKPS
Trigger: TGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA...AGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GCTCCCCTTAGAACAGCCTATGGAGGGACTGAGGAAACGGAATTACATTCAGTTCAGCCAGAGCCTGACTaGGCCCAAATCCCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: APLRTAYGGTEETELHSVQPEPD*AQIPPY
Trigger: GTAAGGAGGGATTTGGGCCCAGTCAGGCTCTGGCTG...AACTGAATGTAATTCCGTTTCCTCAGTCCCTCCATAGGCTGTTCTAAGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR CCA 90 bp GCTCCCCTTAGAACAGCCTATGGAGGGACTGAGGAAACGGAATTACATTCAGTTCCAGGCTTTCCTCCATaGCCTGGCCTTGAGAATCCC +
Preference number: 4 (lower is better)
Translates to: APLRTAYGGTEETELHSVPGFPP*PGLENP
Trigger: GGGATTCTCAAGGCCAGGCCATGGAGGAAAGCCTGG...AACTGAATGTAATTCCGTTTCCTCAGTCCCTCCATAGGCTGTTCTAAGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR CCA 90 bp CTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGTGGTGGACAGAGGGGGTGTTACCAAGCTGGAAATaGAAAGCCCTCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: LTFLDSNHSCLAWWTEGVLPSWK*KALPIP
Trigger: GGGGATGGGGAGGGCTTTCCATTTCCAGCTTGGTAA...CACCCCCTCTGTCCACCACGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp CCATCTCTGGCAACAGTTTCCATAACAACAGGAATCAGGGATGTGGAGGGCGATGATACCAGATGTCTCTaGGTGGGTACCCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PSLATVSITTGIRDVEGDDTRCL*VGTLGW
Trigger: CCAACCCAGGGTACCCACCCAGAGACATCTGGTATC...ATCGCCCTCCACATCCCTGATTCCTGTTGTTATGGAAACTGTTGCCAGAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp GAGATCAGGTCTGGAATGTTAGAAGGGCATCTTGTACATCCACTGGGAATAAATGTGCGTGGGGAGCAGTaGCGCATCGGCCTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: EIRSGMLEGHLVHPLGINVRGEQ*RIGLCY
Trigger: GTAGCAGAGGCCGATGCGCCACTGCTCCCCACGCAC...ATTTATTCCCAGTGGATGTACAAGATGCCCTTCTAACATTCCAGACCTGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp GTGCCTCAGTTTTACAATTGTAAAATAGGGCACTACCTAGAATACTGGGTACATCCGCTGCGGAGTGCGTaGGGAGCAGTGGCGCATCGG +
Preference number: 4 (lower is better)
Translates to: VPQFYNCKIGHYLEYWVHPLRSA*GAVAHR
Trigger: CCGATGCGCCACTGCTCCCCACGCACTCCGCAGCGG...ATGTACCCAGTATTCTAGGTAGTGCCCTATTTTACAATTGTAAAACTGAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp AGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCTTTACGCCTACGATGTaGACATCCAGAACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: RDSVLVQVGPGKVPSHQLFTPTM*TSRTVR
Trigger: CCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAA...GAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTTTACGCCTACGATGTaGACATCCAGAACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LETQFLCRLGLGKSQAISFTPTM*TSRTVR
Trigger: CCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAA...GCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATGCATGTTCAGCTTGTTaGTTTTCAGGGCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: VLLRHPQGGLLLRLRCGHACSAC*FSGLSL
Trigger: CAGACTGAGCCCTGAAAACCAACAAGCTGAACATGC...ATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGCCACTTTCCAGGACGTGCCAGCTGTAGTCTaGTTCTACCAAAAGCACCTA +
Preference number: 4 (lower is better)
Translates to: AYDVDIQNSEGMVATFQDVPAVV*FYQKHL
Trigger: TAGGTGCTTTTGGTAGAACCAGACTACAGCTGGCAC...GTCCTGGAAAGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp AAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAACAGGTCCTGTTGCTGCTTTTCCTaGCTGCATAATCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KDRQHLYRTQYLKGVNRSCCCFS*LHNPFL
Trigger: GAGGAAAGGATTATGCAGCCAGGAAAAGCAGCAACA...GGACCTGTTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR TCA 90 bp ACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGCACCATCATCTCCCCTaGGGAGACGTAGGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: TTSFEVLNFPLETQFLCRHHHLP*GDVGAA
Trigger: CGCCGCTCCTACGTCTCCTCAGGGGAGATGATGGTG...CCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR TCA 90 bp TTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGCCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: FEVLNFPLETQFLCRLGLPRCSS*GGLLTQ
Trigger: CTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGG...CAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CCTCCCCATCCCCAACTGTGTCTGCTAGAGTTGGAAGTGAAAGCTACTAACTTTAGATCCCCCAAGTGCTaGGAATCAAGCTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: PPHPQLCLLELEVKATNFRSPKC*ESSSHL
Trigger: CAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCT...AAAGTTAGTAGCTTTCACTTCCAACTCTAGCAGACACAGTTGGGGATGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR TCA 90 bp GACTTCACATTTAGGTCAGAGAAGGAAAGTGTGAACTCAGATTTATCCAGTGGTGGGAGAGGAGAACCCTaGAGTGGGCCCTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: DFTFRSEKESVNSDLSSGGRGEP*SGPSQS
Trigger: GGACTGGGAGGGCCCACTTCAGGGTTCTCCTCTCCC...ACCACTGGATAAATCTGAGTTCACACTTTCCTTCTCTGACCTAAATGTGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp ATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCCATGAGGGTGTTCATTaGCCACGGCAACCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IGYLLITAVFVTIHFCRCHEGVH*PRQPAP
Trigger: TGGAGCTGGTTGCCGTGGTCAATGAACACCCTCATG...GCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp AGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGTGTTGAATCATGTTTaGGCTGCTTTGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RPVLLRHPQGGLLLRLRCVLNHV*AALLSC
Trigger: GCAAGAAAGCAAAGCAGCTCAAACATGATTCAACAC...ACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR TCA 90 bp GAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGTCCAGTGGTAAACACTaGTCAGTGTTGAATCATGTT +
Preference number: 4 (lower is better)
Translates to: EHLGPPFSFRFPLTHSWVSSGKH*SVLNHV
Trigger: AACATGATTCAACACTGATCAGTGTTTACCACTGGA...CACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR TCA 90 bp CACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTGGAGGCAGTCCAGTGGTAAACACTaGTCAGTGTTGAATCATGTT +
Preference number: 4 (lower is better)
Translates to: HIRFTQLDDRGIYYCWRQSSGKH*SVLNHV
Trigger: AACATGATTCAACACTGATCAGTGTTTACCACTGGA...CTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR TCA 90 bp AGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCAGAGAAGGAAAGTGTaGACTCAGATTTATCCAGTG +
Preference number: 4 (lower is better)
Translates to: SSCAGWAWESPKPSAQVQQRRKV*TQIYPV
Trigger: CACTGGATAAATCTGAGTTCACACTTTCCTTCTCTG...CTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR TCA 90 bp AAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAAATTTCAGGGCTCAGTCTaGGGACTCAGGCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: KTKTIREGVLAIINYVSKFQGSV*GLRPVL
Trigger: AAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAA...TTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp ACCACTAACAAGCTCTGCCAGTTTAATGTACAGTTACTCTGTACCACGTCCTGGGAGGCCCTGCTGTACTaGCCTCGAATCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TTNKLCQFNVQLLCTTSWEALLY*PRICRL
Trigger: CAACCTGCAGATTCGAGGTCAGTACAGCAGGGCCTC...CCAGGACGTGGTACAGAGTAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp TGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTTGCCTCATACTGCGTaGGGATCTCTTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CAPKDSPPLPLTSSASLMLPHTA*GSLSGL
Trigger: CAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAA...CATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp GCTCCCCTTAGAACAGCCTATGGAGGGACTGAGGAAACGGAATTACATTCAGTTAGGTTGGAGAAGGTCTaGACGGGAATGGTGATCCGG +
Preference number: 4 (lower is better)
Translates to: APLRTAYGGTEETELHSVRLEKV*TGMVIR
Trigger: CCGGATCACCATTCCCGTGCAGACCTTCTCCAACCT...AACTGAATGTAATTCCGTTTCCTCAGTCCCTCCATAGGCTGTTCTAAGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR GCA 90 bp AGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTCTTACTTTTCTTGATATTGCCCCCTCGAATCTaGAGGTTGGAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RLCNLGKSPTSQVLLFLILPPRI*RLEKVC
Trigger: GCAGACCTTCTCCAACCTGCAGATTCGAGGGGGCAA...TATCAAGAAAAGTAAGACCTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR GCA 90 bp AGGAGCCCTTTGCAGATGAATACTATGGGCACCTCCATGTCTTCACCACCTTCTCTGAGGTGGGTAGACTaGTTGAGCCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: RSPLQMNTMGTSMSSPPSLRWVD*LSPGVQ
Trigger: TTGAACTCCTGGGCTCAAGCAGTCTACCCACCTCAG...AGAAGGTGGTGAAGACATGGAGGTGCCCATAGTATTCATCTGCAAAGGGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GAGAGAACCTCCATCTCTGGCAACAGTTTCCATAACAACAGGAATCAGGGATGTAATCAAGCTCCCACCTaGCCACAGCGTGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: ERTSISGNSFHNNRNQGCNQAPT*PQRAHR
Trigger: TCTGTGGGCACGCTGTGGGCAGGTGGGAGCTTGATT...ACATCCCTGATTCCTGTTGTTATGGAAACTGTTGCCAGAGATGGAGGTTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp TCACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGACCAGTGTCTTCACTTTaGTCGTGCCTCAGTTTTACA +
Preference number: 4 (lower is better)
Translates to: SLWGGEGQTCGSGLLGLRPVSSL*SCLSFT
Trigger: TGTAAAACTGAGGCACGAGCAAAGTGAAGACACTGG...TCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp AACAGTTTCCATAACAACAGGAATCAGGGATGTGGAGGGCGATGTAGTAGGTGCTGGGAACCTTCTATGTaGCAGCCCCAGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: NSFHNNRNQGCGGRCSRCWEPSM*QPQAFL
Trigger: GAGGAAAGCCTGGGGCTGGCACATAGAAGGTTCCCA...GCACCTACTACATCGCCCTCCACATCCCTGATTCCTGTTGTTATGGAAACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR GCA 90 bp AGTGTCTTCACTTTGCTCGTGCCTCAGTTTTACAATTGTAAAATAGGGCACTACTGGCCCTCACCACTGTaGTCCTGTGGGCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: SVFTLLVPQFYNCKIGHYWPSPL*SCGHGG
Trigger: GCCCCCATGCCCACAGGAGCACAGTGGTGAGGGCCA...GTAGTGCCCTATTTTACAATTGTAAAACTGAGGCACGAGCAAAGTGAAGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp CATAAAACTTTATTCACTGCAAGAGCTGCGGTCCTGAGGGAAGAATCCTCTGAACCAGACGGGCCAGGGTaGCTTCATCTGCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: HKTLFTARAAVLREESSEPDGPG*LHLLPV
Trigger: GACAGGAAGCAGATGAAGCCACCCTGGCCCGTCTGG...TTCAGAGGATTCTTCCCTCAGGACCGCAGCTCTTGCAGTGAATAAAGTTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp GTGAGCCTGTATTGGTATAACTCGTATTGTGAGGCTTTTGAGATATCTTGTGACCGGGCCAGCTGCTCCTaGAGTTCCCGAACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VSLYWYNSYCEAFEISCDRASCS*SSRTSS
Trigger: GGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCG...GTCACAAGATATCTCAAAAGCCTCACAATACGAGTTATACCAATACAGGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp ACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCTGCGGTGAGGTCTaGCTTGGCCACGTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: TSFEVLNFPLETQFLCRLGCGEV*LGHVKL
Trigger: GAGCTTGACGTGGCCAAGCCAGACCTCACCGCAGCC...CAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp TCCACTGGGAATAAATTGCCTTGCACTTGGCGGCTTCCTCTGCAGATTGTTGCTTCAGGTCTGCAAACTTaGAGCGGTACCACTCTTCGG +
Preference number: 4 (lower is better)
Translates to: STGNKLPCTWRLPLQIVASGLQT*SGTTLR
Trigger: CCGAAGAGTGGTACCGCTCCAAGTTTGCAGACCTGA...AGCAACAATCTGCAGAGGAAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp ACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTGGATGGCAGCTCAGGTaGACTGAGACACTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: TCSSQQSLSPFTSVVAAAGWQLR*TETLES
Trigger: TGACTCAAGTGTCTCAGTCCACCTGAGCTGCCATCC...AGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp TACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGCCACTAGATATGCAGGAGGGTaGGTTTCCTTCATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: YFYAYDVDIQNSEGMVATRYAGG*VSFIPQ
Trigger: CTGGGGGATGAAGGAAACCCACCCTCCTGCATATCT...AGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp CTCCCCCTAGGAGCTCTCTTCAGCTCTGAAGACCAGTTGTCCTTCAATGTGTTTAGTTCTTGTGCAGGTTaGGCCTGGGAAAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LPLGALFSSEDQLSFNVFSSCAG*AWESPK
Trigger: CTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT...AAACACATTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCTCCTAGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTCTTACTTTTCTTGATATTCTCTTTCTCTCCCTaGCAAGCAAGGCCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: RLCNLGKSPTSQVLLFLIFSFSP*QARPPS
Trigger: ACTCGGGGGCCTTGCTTGCCAGGGAGAGAAAGAGAA...TATCAAGAAAAGTAAGACCTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp GATGGAAGTAGGGCACATGTGTTTCCTGACTTCACATTTAGGTCAGAGAAGGAATCTGGGTGGGTACCCTaGGTTGGGACAGGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: DGSRAHVFPDFTFRSEKESGWVP*VGTGGR
Trigger: CCTACCACCTGTCCCAACCCAGGGTACCCACCCAGA...TTCCTTCTCTGACCTAAATGTGAAGTCAGGAAACACATGTGCCCTACTTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CCA 90 bp ACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTACAGTGAGGGAATGGTaGCCACTTTCCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: TCSSQQSLSPFTSVVAAATVREW*PLSRTR
Trigger: CCTTGTCCTGGAAAGTGGCCACCATTCCCTCACTGT...AGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp TTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAACAGTGAGGGAATGGTaGCCACTTTCCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: FSIRMFSLLVFRAQSEDSTVREW*PLSRTR
Trigger: CCTTGTCCTGGAAAGTGGCCACCATTCCCTCACTGT...TGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CCA 90 bp GCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCTGTTGCTGCTTTTCCTaGCTGCATAATCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: AVELTLIGYLLITAVFVTCCCFS*LHNPFL
Trigger: GAGGAAAGGATTATGCAGCCAGGAAAAGCAGCAACA...GGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp ATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGAAATTGCCTTGCACTTaGCGGCTTCCTCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: IRMFSLLVFRAQSEDSGLKLPCT*RLPLQI
Trigger: AATCTGCAGAGGAAGCCGCCAAGTGCAAGGCAATTT...CAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp TGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTGGTATGATAGGCTCTaGCTAGGAGCGCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: CAPKDSPPLPLTSSASLMWYDRL*LGALQC
Trigger: ACACTGCAGCGCTCCTAGCCAGAGCCTATCATACCA...CATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp GAGAAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCACTTGGTGTCCAGGCTaGTTTCTTGTGATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: EKTKTIREGVLAIINYVSTWCPG*FLVIFP
Trigger: GGGGAAAATCACAAGAAACCAGCCTGGACACCAAGT...GGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639042.1
CDS-3UTR TCA 90 bp ACCACTAACAAGCTCTGCCAGTTTAATGTACAGTTACTCTGTACCACGTCCTGGTGGCAAAGCGGTCATTaGGCTCCATCATCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: TTNKLCQFNVQLLCTTSWWQSGH*APSSLP
Trigger: GGGCAGAGATGATGGAGCTCAATGACCGCTTTGCCA...CCAGGACGTGGTACAGAGTAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR TCA 90 bp GCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCCCATTTACAATCTGGTaGGCCTGTATTGGTATAACT +
Preference number: 4 (lower is better)
Translates to: ACSGICRQGRCQALTQFCPFTIW*ACIGIT
Trigger: AGTTATACCAATACAGGCTCACCAGATTGTAAATGG...GCAGAACTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp AAGTGCAACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTGGTACATTTTGTGTGTaGGTAAGAAGGGACCGCAAG +
Preference number: 4 (lower is better)
Translates to: KCNWSPTTPTCMPSAIPIGTFCV*VRRDRK
Trigger: CTTGCGGTCCCTTCTTACTCACACACAAAATGTACC...AATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR TCA 90 bp GTGCCTCAGTTTTACAATTGTAAAATAGGGCACTACCTAGAATACTGGGTACATGGGAGAGGAGAACCCTaGAGTGGGCCCTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VPQFYNCKIGHYLEYWVHGRGEP*SGPSQS
Trigger: GGACTGGGAGGGCCCACTTCAGGGTTCTCCTCTCCC...ATGTACCCAGTATTCTAGGTAGTGCCCTATTTTACAATTGTAAAACTGAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR TCA 90 bp GGGACTACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGAGCTCTCTTCAGCTCTaGAGACCAGTTGTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: GTTFTPTMWTSRTVREWWSSLQL*RPVVLQ
Trigger: TTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCT...CCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR TCA 90 bp CCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGTAGTGACAGGAAGAGGTaGGACAGAGGCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PKDSPPLPLTSSASLMYSSDRKR*DRGCCL
Trigger: CAAGCAGCAGCCTCTGTCTCACCTCTTCCTGTCACT...ACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp GCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTCTGCTTAGTACCCTGTaGGAAGACAAAGACCATCCG +
Preference number: 4 (lower is better)
Translates to: ATCSSQQSLSPFTSVVAALLSTL*EDKDHP
Trigger: CGGATGGTCTTTGTCTTCTCACAGGGTACTAAGCAG...AGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR TCA 90 bp ATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTTTCAGGGCTCAGTCTaGGGACTCAGGCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: IGYLLITAVFVTIHFCRCFQGSV*GLRPVL
Trigger: AAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAA...GCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp AAAACTTTATTCACTGCAAGAGCTGCGGTCCTGAGGGAAGAATCCTCTGAACTGGAAGCCAGCATTGAGTaGCCCAGCCAGGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: KTLFTARAAVLREESSELEASIE*PSQGEI
Trigger: GATTTCTCCCTGGCTGGGGCACTCAATGCTGGCTTC...CAGTTCAGAGGATTCTTCCCTCAGGACCGCAGCTCTTGCAGTGAATAAAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp CGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGGGTGGCTTCATCTaGTTCCTGTCTATAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RTQGLTTFTTNKLCQFNVQGGFI*FLSIGS
Trigger: GCTGCCTATAGACAGGAAGCAGATGAAGCCACCCTG...TACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp CGCTCGGCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTTTCTGTCGTTGCTGCTaGTACTTATTTCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: RSAVELTLIGYLLITAVFFCRCC*YLFHCC
Trigger: ACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAA...AAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGCCGAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp AGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAACAGGTCCATATTCACTTCTGTCGTTaGTGCTGCTACTTATTTCAC +
Preference number: 4 (lower is better)
Translates to: RPPAPLPHTVPEGCQQVHIHFCR*CCYLFH
Trigger: GTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAAT...ATGGACCTGTTGACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR GCA 90 bp GACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGATTCACTTCTGTCGTTaGTGCTGCTACTTATTTCAC +
Preference number: 4 (lower is better)
Translates to: DSVLVQVGPGKVPSHQLRIHFCR*CCYLFH
Trigger: GTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAAT...CCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp ATGAGGGTGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGATTCACTTCTGTCGTTaGTGCTGCTACTTATTTCAC +
Preference number: 4 (lower is better)
Translates to: MRVFIDHGNQLHIRFTQLIHFCR*CCYLFH
Trigger: GTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAAT...CAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACACCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATCTGGTACCACTAACAAGCTCTaGCAGTTTAATGTACAGTTA +
Preference number: 4 (lower is better)
Translates to: SERQAANREPAAFHLQSGTTNKL*QFNVQL
Trigger: TAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGT...ACCAGATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp CTCCCCCTAGGAGCTCTCTTCAGCTCTGAAGACCAGTTGTCCTTCAATGTGTTTTTTCAGAGGACCCCCTaGCCTGCTTTCCTGATGTTT +
Preference number: 4 (lower is better)
Translates to: LPLGALFSSEDQLSFNVFFQRTP*PAFLMF
Trigger: AAACATCAGGAAAGCAGGGCAGGGGGTCCTCTGAAA...AAACACATTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCTCCTAGGGGGAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp ACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGCCACTTCCACTGGGAATAAATTaGCTTGCACTTGGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: TFTPTMWTSRTVREWWPLPLGIN*LALGGF
Trigger: GAAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGG...AAGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp GTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTG +
Preference number: 4 (lower is better)
Translates to: VELTLIGYLLITAVFVTIMFLLR*PSDTDL
Trigger: CAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACAT...AATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGGCATCTACTATTGCTaGAGGCAGGGTGTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: ATCSSQQSLSPFTSVVAAGIYYC*RQGVLV
Trigger: AACTAGCACACCCTGCCTCCAGCAATAGTAGATGCC...AGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp ACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGAGGCCGTGCCCGATGTaGTGTCTTGTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: TSFEVLNFPLETQFLCRLRPCPM*CLVAQG
Trigger: CCCTTGAGCCACAAGACACCACATCGGGCACGGCCT...CAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACCCCAAACCAATGAATaGACATGTAATCAACAAATG +
Preference number: 4 (lower is better)
Translates to: GLRPVLLRHPQGGLLLRLPQTNE*TCNQQM
Trigger: CATTTGTTGATTACATGTCCATTCATTGGTTTGGGG...TAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATCCCCAAACCAATGAATaGACATGTAATCAACAAATG +
Preference number: 4 (lower is better)
Translates to: ESPKPSAQVQPASRMARYPQTNE*TCNQQM
Trigger: CATTTGTTGATTACATGTCCATTCATTGGTTTGGGG...ATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000639277.1
CDS-3UTR CCA 90 bp GTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGCTTCTGACACAGACTTaGTGTCCAGGCTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VLNFPLETQFLCRLGLGKLLTQT*CPGWFL
Trigger: GAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAG...CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR CCA 90 bp CTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGTGGTGGACAGAGGGGGTGTTCCTTTTACCAAGCTaGAAATGGAAAGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LTFLDSNHSCLAWWTEGVFLLPS*KWKALP
Trigger: GGGGAGGGCTTTCCATTTCCAGCTTGGTAAAAGGAA...CACCCCCTCTGTCCACCACGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CCA 90 bp GGAGTTCAAGGTCAGCCTAGGCAGCATAGGGATATCCCACCTCATAAAAACCAATGCTCCCCATTTTCATaGGCAGGTCTGGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: GVQGQPRQHRDIPPHKNQCSPFS*AGLGPD
Trigger: ATCAGGTCCCAGACCTGCCCATGAAAATGGGGAGCA...TTGGTTTTTATGAGGTGGGATATCCCTATGCTGCCTAGGCTGACCTTGAACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp AGGATGGAAGTAGGGCACATGTGTTTCCTGACTTCACATTTAGGTCAGAGAAGGGCAGAGACTGGGCCATaGACTCATCATCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RMEVGHMCFLTSHLGQRRAETGP*THHLLS
Trigger: GGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGC...CCTTCTCTGACCTAAATGTGAAGTCAGGAAACACATGTGCCCTACTTCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
3UTR CAA 72 bp TTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTaGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATC +
Preference number: 4 (lower is better)
Translates to: FEVLNFPLETQF*CRLGLGKSQAI
Trigger: GATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp CTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGTGGTGGACAGAGGGGGTGTATCTTGTGACCTTGTaGTTTTCCCCGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LTFLDSNHSCLAWWTEGVYLVTL*FSPSLV
Trigger: CACCAAAGACGGGGAAAATCACAAGGTCACAAGATA...CACCCCCTCTGTCCACCACGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR TCA 90 bp ACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTAGCTCTCTTCAGCTCTaGAGACCAGTTGTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: TCSSQQSLSPFTSVVAAASSLQL*RPVVLQ
Trigger: TTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCT...AGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp ACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGCTCGTTCTCAGATCCTaGGACTCGCTCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: TTSFEVLNFPLETQFLCRLVLRS*DSLGCG
Trigger: TCCACAGCCGAGCGAGTCTCAGGATCTGAGAACGAG...CCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp AGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCATGGTAAACAAACACTaGTCTCCACAGCTCTTAACA +
Preference number: 4 (lower is better)
Translates to: RDSVLVQVGPGKVPSHQLMVNKH*SPQLLT
Trigger: TGTTAAGAGCTGTGGAGATCAGTGTTTGTTTACCAT...GAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp TCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTACTTATTTCTTGCCCCCTCGAATCTaGAGGTTGGAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SQQSLSPFTSVVAAATYFLPPRI*RLEKVC
Trigger: GCAGACCTTCTCCAACCTGCAGATTCGAGGGGGCAA...GAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639042.1
CDS-3UTR GCA 90 bp ACCTCCATCTCTGGCAACAGTTTCCATAACAACAGGAATCAGGGATGTGGAGGGACATCCTTGTGCTCCTaGTTGGACTCCTTAATGACC +
Preference number: 4 (lower is better)
Translates to: TSISGNSFHNNRNQGCGGTSLCS*LDSLMT
Trigger: GGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGT...CCCTCCACATCCCTGATTCCTGTTGTTATGGAAACTGTTGCCAGAGATGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp GATACTCCGAGAGAACCTCCATCTCTGGCAACAGTTTCCATAACAACAGGAATCCTGAGGTGGGTAGACTaGTTGAGCCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: DTPREPPSLATVSITTGILRWVD*LSPGVQ
Trigger: TTGAACTCCTGGGCTCAAGCAGTCTACCCACCTCAG...GATTCCTGTTGTTATGGAAACTGTTGCCAGAGATGGAGGTTCTCTCGGAGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR GCA 90 bp TCAGCTCTGAAGACCAGTTGTCCTTCAATGTGTTTGTTAAATGATACCAGATGTATCTGGGCAGGTGACTaGCCCAGGTGGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: SALKTSCPSMCLLNDTRCIWAGD*PRWQDV
Trigger: GACGTCCTGCCACCTGGGGCAGTCACCTGCCCAGAT...ACATCTGGTATCATTTAACAAACACATTGAAGGACAACTGGTCTTCAGAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCTTCTGTCGTTGCTGCTaGTACTTATTTCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: AVELTLIGYLLITAVFVTFCRCC*YLFHCC
Trigger: ACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAA...GGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CCACTTTCCAGGACAAGGGCCAGGAGCCCTTTGCAGATGAATACTATGGGCACCTTCTGTCGTTGCTGCTaGTACTTATTTCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: PLSRTRARSPLQMNTMGTFCRCC*YLFHCC
Trigger: ACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAA...GGTGCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCTTGTCCTGGAAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR GCA 90 bp CCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGTTCTGTCGTTGCTGCTaGTACTTATTTCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: PRDSVLVQVGPGKVPSHQFCRCC*YLFHCC
Trigger: ACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAA...CTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACAATTCACTTCTGTCGTTaGTGCTGCTACTTATTTCAC +
Preference number: 4 (lower is better)
Translates to: CTSAAPARGTTFTPTMWTIHFCR*CCYLFH
Trigger: GTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAAT...TGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR GCA 90 bp ATTCTCTTTCTCTCCCTGGCAAGCAAGGCCCCCGAGTTTGAGGGTGAGAAAGAGTACATTCAGTTTCCTTaGTCTCCTCCAGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: ILFLSLASKAPEFEGEKEYIQFP*SPPEFP
Trigger: AGGGAATTCTGGAGGAGAGCAAGGAAACTGAATGTA...CTCTTTCTCACCCTCAAACTCGGGGGCCTTGCTTGCCAGGGAGAGAAAGAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR GCA 90 bp TCAAATACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGGCCCTCACCACTGTaGTCCTGTGGGCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: SNTTSFEVLNFPLETQFLWPSPL*SCGHGG
Trigger: GCCCCCATGCCCACAGGAGCACAGTGGTGAGGGCCA...CAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGTATTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR GCA 90 bp ATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGCAGATTGTTGCTaGTTTTCCTGGCTGCATAAT +
Preference number: 4 (lower is better)
Translates to: MLTRFSIRMFSLLVFRAQSADCC*FSWLHN
Trigger: ATTATGCAGCCAGGAAAAGCAGCAACAATCTGCAGA...CTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp AGTGTCTTCACTTTGCTCGTGCCTCAGTTTTACAATTGTAAAATAGGGCACTACGCAGAGGCCACCAGGTaGGTCCTGCCTCACATCACA +
Preference number: 4 (lower is better)
Translates to: SVFTLLVPQFYNCKIGHYAEATR*VLPHIT
Trigger: TGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTGC...GTAGTGCCCTATTTTACAATTGTAAAACTGAGGCACGAGCAAAGTGAAGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp ACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTCCCCAAACCAATGAATaGACATGTAATCAACAAATG +
Preference number: 4 (lower is better)
Translates to: TSSTSASPSWMTGASTIAPQTNE*TCNQQM
Trigger: CATTTGTTGATTACATGTCCATTCATTGGTTTGGGG...AGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CCA 90 bp GATGGAAGTAGGGCACATGTGTTTCCTGACTTCACATTTAGGTCAGAGAAGGAACTCTTTGGCTGCGGGTaGAATTTGGTGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: DGSRAHVFPDFTFRSEKELFGCG*NLVRAW
Trigger: CCATGCCCTCACCAAATTCCACCCGCAGCCAAAGAG...TTCCTTCTCTGACCTAAATGTGAAGTCAGGAAACACATGTGCCCTACTTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp GTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTGGTGGTAGGAACATGTaGACAAATCTGTTACAGCCT +
Preference number: 4 (lower is better)
Translates to: VELTLIGYLLITAVFVTIGGRNM*TNLLQP
Trigger: AGGCTGTAACAGATTTGTCCACATGTTCCTACCACC...AATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CCA 90 bp AGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTACTTATTTCACTGTTGCCAGATGTCTCTGGGTaGGTACCCTGGGTTGGGACA +
Preference number: 4 (lower is better)
Translates to: SLCHHSLLSLLLLLISLLPDVSG*VPWVGT
Trigger: TGTCCCAACCCAGGGTACCCACCCAGAGACATCTGG...CAACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CCA 90 bp ATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCGCATGTTCAGCTTGTTaGTTTTCAGGGCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: MFSLLVFRAQSEDSGLYFACSAC*FSGLSL
Trigger: CAGACTGAGCCCTGAAAACCAACAAGCTGAACATGC...GAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GAGATCAGGTCTGGAATGTTAGAAGGGCATCTTGTACATCCACTGGGAATAAATCTTCAGGTATGCACCTaGCCCTCACCACTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: EIRSGMLEGHLVHPLGINLQVCT*PSPLCS
Trigger: GGAGCACAGTGGTGAGGGCCAGGTGCATACCTGAAG...ATTTATTCCCAGTGGATGTACAAGATGCCCTTCTAACATTCCAGACCTGATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp TGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGCACCTAGAAGTACCCTaGTATGATAGGCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: CAPKDSPPLPLTSSASLMHLEVP*YDRLWL
Trigger: TAGCCAGAGCCTATCATACCAGGGTACTTCTAGGTG...CATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp ACCACTAACAAGCTCTGCCAGTTTAATGTACAGTTACTCTGTACCACGTCCTGGAAGAATCCTCTGAACTaGGTCAGCACTGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TTNKLCQFNVQLLCTTSWKNPLN*VSTELS
Trigger: GCTCAGCTCAGTGCTGACTCAGTTCAGAGGATTCTT...CCAGGACGTGGTACAGAGTAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR TCA 90 bp AACAGTTTCCATAACAACAGGAATCAGGGATGTGGAGGGCGATGTAGTAGGTGCAGCCTATGGAGGGACTaGGGAAACGGAATTACATTC +
Preference number: 4 (lower is better)
Translates to: NSFHNNRNQGCGGRCSRCSLWRD*GNGITF
Trigger: GAATGTAATTCCGTTTCCTCAGTCCCTCCATAGGCT...GCACCTACTACATCGCCCTCCACATCCCTGATTCCTGTTGTTATGGAAACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR TCA 90 bp CCTCCCCATCCCCAACTGTGTCTGCTAGAGTTGGAAGTGAAAGCTACTAACTTTAGCCTATGGAGGGACTaGGGAAACGGAATTACATTC +
Preference number: 4 (lower is better)
Translates to: PPHPQLCLLELEVKATNFSLWRD*GNGITF
Trigger: GAATGTAATTCCGTTTCCTCAGTCCCTCCATAGGCT...AAAGTTAGTAGCTTTCACTTCCAACTCTAGCAGACACAGTTGGGGATGGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR TCA 90 bp TACAATCTGGTGAGCCTGTATTGGTATAACTCGTATTGTGAGGCTTTTGAGATACGTCTGCAAGGGGCTTaGGTGTTATCTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: YNLVSLYWYNSYCEAFEIRLQGA*VLSGRG
Trigger: GCCCCTCCCAGATAACACTCAAGCCCCTTGCAGACG...TATCTCAAAAGCCTCACAATACGAGTTATACCAATACAGGCTCACCAGATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS-3UTR TCA 90 bp CAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGTTAGGTGCGGGGCCATCATaGCAACTTGAACGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: QGLTTFTTNKLCQFNVQLGAGPS*QLERPF
Trigger: AAAAGGGCGTTCAAGTTGTCATGATGGCCCCGCACC...TAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS-3UTR GCA 90 bp GCTCTTAACAAGAATGTTTATAGCCCCAAACCAATGAATGGACATGTAATCAACAGCTCCACATGGACCTaGTGTCGGGCCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALNKNVYSPKPMNGHVINSSTWT*CRASCS
Trigger: GGAGCAGCTGGCCCGACAGCAGGTCCATGTGGAGCT...GTTGATTACATGTCCATTCATTGGTTTGGGGCTATAAACATTCTTGTTAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp AAGTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCACATCACATCCTTGTaGTCCTGCTTGGACTCCTTA +
Preference number: 4 (lower is better)
Translates to: KSPTSQVLLFLIVTTAALHITSL*SCLDSL
Trigger: TAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTG...CAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTGGGAAGTCGGGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR GCA 90 bp GACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTTTCTGTCGTTGCTGCTaGTACTTATTTCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: DMLTRFSIRMFSLLVFRAFCRCC*YLFHCC
Trigger: ACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAA...AGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp TTTCCTGACTTCACATTTAGGTCAGAGAAGGAAAGTGTGAACTCAGATTTATCCGTGGCTCAAGGGCTGTaGCAAGGAAGCTGCGGACCA +
Preference number: 4 (lower is better)
Translates to: FPDFTFRSEKESVNSDLSVAQGL*QGSCGP
Trigger: TGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGCCAC...GGATAAATCTGAGTTCACACTTTCCTTCTCTGACCTAAATGTGAAGTCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR GCA 90 bp TACAATCTGGTGAGCCTGTATTGGTATAACTCGTATTGTGAGGCTTTTGAGATACCAGAGCAGCTCCACTaGGCACCCAAGGACTCACCA +
Preference number: 4 (lower is better)
Translates to: YNLVSLYWYNSYCEAFEIPEQLH*APKDSP
Trigger: TGGTGAGTCCTTGGGTGCGCAGTGGAGCTGCTCTGG...TATCTCAAAAGCCTCACAATACGAGTTATACCAATACAGGCTCACCAGATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR GCA 90 bp ACCACTAACAAGCTCTGCCAGTTTAATGTACAGTTACTCTGTACCACGTCCTGGATTCACTGCAAGAGCTaGGGTCCTGAGGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: TTNKLCQFNVQLLCTTSWIHCKS*GPEGRI
Trigger: GATTCTTCCCTCAGGACCGCAGCTCTTGCAGTGAAT...CCAGGACGTGGTACAGAGTAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp CTTAGAACAGCCTATGGAGGGACTGAGGAAACGGAATTACATTCAGTTTCCTTGGGAGCTACTGGGAGTTaGTGGGAACCTTCTATGTGC +
Preference number: 4 (lower is better)
Translates to: LRTAYGGTEETELHSVSLGATGS*WEPSMC
Trigger: GCACATAGAAGGTTCCCAGCAACTCCCAGTAGCTCC...CAAGGAAACTGAATGTAATTCCGTTTCCTCAGTCCCTCCATAGGCTGTTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR GCA 90 bp ACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGCCATCCGGGAGGGCGTaGTGGCCATCATTAACTATG +
Preference number: 4 (lower is better)
Translates to: TTSFEVLNFPLETQFLCRPSGRA*WPSLTM
Trigger: CATAGTTAATGATGGCCAGCACGCCCTCCCGGATGG...CCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
CDS-3UTR CCA 90 bp AAAACTTTATTCACTGCAAGAGCTGCGGTCCTGAGGGAAGAATCCTCTGAACTGAGGTTGGTTTCATCCTaGAGCTTCTGCCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: KTLFTARAAVLREESSELRLVSS*SFCLTV
Trigger: CACTGTGAGGCAGAAGCTCCAGGATGAAACCAACCT...CAGTTCAGAGGATTCTTCCCTCAGGACCGCAGCTCTTGCAGTGAATAAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CCA 90 bp TCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTACTTATTTCCTCGAATCTGCAGGTTaGAGAAGGTCTGCACGGGAA +
Preference number: 4 (lower is better)
Translates to: SQQSLSPFTSVVAAATYFLESAG*RRSARE
Trigger: TTCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAG...GAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639042.1
CDS-3UTR CCA 90 bp GTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGCTGGTGAGCCTGTATTaGTATAACTCGTATTGTGAG +
Preference number: 4 (lower is better)
Translates to: VPDFPGLTFLDSNHSCLALVSLY*YNSYCE
Trigger: CTCACAATACGAGTTATACCAATACAGGCTCACCAG...CGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTGGGAAGTCGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR CCA 90 bp ACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGCGATGTGGTGTCTTGTaGCTCAAGGGCTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: TSFEVLNFPLETQFLCRLRCGVL*LKGCAK
Trigger: CTTGGCACAGCCCTTGAGCCACAAGACACCACATCG...CAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp ATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCGCATGTTCAGCTTGTTaGTTTTCAGGGCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: IGYLLITAVFVTIHFCRCACSAC*FSGLSL
Trigger: CAGACTGAGCCCTGAAAACCAACAAGCTGAACATGC...GCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CCA 90 bp ACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGGAGCCTTTAATGCCCTaGTTTTGCCCTGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TTSFEVLNFPLETQFLCREPLMP*FCPAPL
Trigger: CAGAGGGGCAGGGCAAAACCAGGGCATTAAAGGCTC...CCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CCA 90 bp CGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTAAGCCAACGTGCTATCTaGAGTTCCAAACGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RTQGLTTFTTNKLCQFNVSQRAI*SSKRLQ
Trigger: TTGCAGACGTTTGGAACTCCAGATAGCACGTTGGCT...TACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS-3UTR TCA 90 bp CTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGTGGTGGACAGAGGGGGTGCCATTTACAATCTGGTaGGCCTGTATTGGTATAACT +
Preference number: 4 (lower is better)
Translates to: LTFLDSNHSCLAWWTEGVPFTIW*ACIGIT
Trigger: AGTTATACCAATACAGGCTCACCAGATTGTAAATGG...CACCCCCTCTGTCCACCACGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR TCA 90 bp ACCAGTTGTCCTTCAATGTGTTTGTTAAATGATACCAGATGTCTCTGGGTGGGTGAAGATTGTGCTGGTTaGGTTGCAGGTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TSCPSMCLLNDTRCLWVGEDCAG*VAGSRE
Trigger: CTCCCTGCTACCTGCAACTCAACCAGCACAATCTTC...ACCCACCCAGAGACATCTGGTATCATTTAACAAACACATTGAAGGACAACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR GCA 90 bp ACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGGCCATTGCCTCATACTaGGTGCGGATCTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TTSFEVLNFPLETQFLCRAIASY*VRISFR
Trigger: CCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGC...CCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp TCAAATACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGGCAGGGTGTGCTAGTTaGTGGCTTCCGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SNTTSFEVLNFPLETQFLAGCAS*WLPAGC
Trigger: ACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGC...CAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGTATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGTGAACGCCCTTTTCCTTaGCAGGAAAGTCTAACTCCA +
Preference number: 4 (lower is better)
Translates to: PKDSPPLPLTSSASLMYSERPFP*QESLTP
Trigger: TGGAGTTAGACTTTCCTGGCAAGGAAAAGGGCGTTC...ACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS-3UTR CCA 90 bp CTGAAGACCAGTTGTCCTTCAATGTGTTTGTTAAATGATACCAGATGTCTCTGGGAGGCCAAGTGCAACTaGTCACCCACAACCCCTACT +
Preference number: 4 (lower is better)
Translates to: LKTSCPSMCLLNDTRCLWEAKCN*SPTTPT
Trigger: AGTAGGGGTTGTGGGTGACCAGTTGCACTTGGCCTC...CCAGAGACATCTGGTATCATTTAACAAACACATTGAAGGACAACTGGTCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp AAGTGCAACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTCACTACCTAGAATACTaGGTACATTTTGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: KCNWSPTTPTCMPSAIPIHYLEY*VHFVCE
Trigger: CTCACACACAAAATGTACCCAGTATTCTAGGTAGTG...AATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp TCAAATACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGAGCCAGCCTCCCGGATaGCCAGATATGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SNTTSFEVLNFPLETQFLSQPPG*PDMQEG
Trigger: ACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCT...CAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGTATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp AGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTACTTATTTCACTGTTGAGTTCTTGTGCAGGTTaGGCCTGGGAAAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SLCHHSLLSLLLLLISLLSSCAG*AWESPK
Trigger: CTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT...CAACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GTGAGCCTGTATTGGTATAACTCGTATTGTGAGGCTTTTGAGATATCTTGTGACATAAAGCAGAGAGCCTaGCGTCCAGGCACAGCGAGA +
Preference number: 4 (lower is better)
Translates to: VSLYWYNSYCEAFEISCDIKQRA*RPGTAR
Trigger: TCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTAT...GTCACAAGATATCTCAAAAGCCTCACAATACGAGTTATACCAATACAGGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp TACAATCTGGTGAGCCTGTATTGGTATAACTCGTATTGTGAGGCTTTTGAGATATCCTCAGTCCCAGTCTaGAGCAACCTACAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: YNLVSLYWYNSYCEAFEISSVPV*SNLQAL
Trigger: CAGGGCCTGTAGGTTGCTCCAGACTGGGACTGAGGA...TATCTCAAAAGCCTCACAATACGAGTTATACCAATACAGGCTCACCAGATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
3UTR CAA 72 bp GTTAGAAGGGCATCTTGTACATCCACTGGGAATAAATaGCCTTGCACTTGGCGGCTTCCTCTGCAGATTGTT +
Preference number: 4 (lower is better)
Translates to: VRRASCTSTGNK*PCTWRLPLQIV
Trigger: AACAATCTGCAGAGGAAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGGATGTACAAGATGCCCTTCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR TCA 90 bp GTGCCTCAGTTTTACAATTGTAAAATAGGGCACTACCTAGAATACTGGGTACATCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VPQFYNCKIGHYLEYWVHLEVAF*HRLGVQ
Trigger: CTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAG...ATGTACCCAGTATTCTAGGTAGTGCCCTATTTTACAATTGTAAAACTGAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR TCA 90 bp GTGAGCCTGTATTGGTATAACTCGTATTGTGAGGCTTTTGAGATATCTTGTGACGAGGGAAGAATCCTCTaGACTGAGTCAGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: VSLYWYNSYCEAFEISCDEGRIL*TESALS
Trigger: GCTCAGTGCTGACTCAGTTCAGAGGATTCTTCCCTC...GTCACAAGATATCTCAAAAGCCTCACAATACGAGTTATACCAATACAGGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp TACAATCTGGTGAGCCTGTATTGGTATAACTCGTATTGTGAGGCTTTTGAGATAAGTGGCCAGGTCCTGTaGCAGATTGTCCCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: YNLVSLYWYNSYCEAFEISGQVL*QIVPLN
Trigger: GTTGAGAGGGACAATCTGGCACAGGACCTGGCCACT...TATCTCAAAAGCCTCACAATACGAGTTATACCAATACAGGCTCACCAGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR GCA 90 bp ATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTTCTGTCGTTGCTGCTaGTACTTATTTCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: MFSLLVFRAQSEDSGLYFFCRCC*YLFHCC
Trigger: ACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAA...GAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR GCA 90 bp GCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTATTCACTTCTGTCGTTaGTGCTGCTACTTATTTCAC +
Preference number: 4 (lower is better)
Translates to: ATCSSQQSLSPFTSVVAAIHFCR*CCYLFH
Trigger: GTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAAT...AGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GATGGAAGTAGGGCACATGTGTTTCCTGACTTCACATTTAGGTCAGAGAAGGAAGAGTTTCTTGTTAGTTaGAGTTGCTGGGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: DGSRAHVFPDFTFRSEKEEFLVS*SCWVLG
Trigger: ACCCAGCACCCAGCAACTCCAACTAACAAGAAACTC...TTCCTTCTCTGACCTAAATGTGAAGTCAGGAAACACATGTGCCCTACTTCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CCA 90 bp GTGCCTCAGTTTTACAATTGTAAAATAGGGCACTACCTAGAATACTGGGTACATTGTGCAGGTTGGGCCTaGGAAAGTCCCAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: VPQFYNCKIGHYLEYWVHCAGWA*ESPKPS
Trigger: TGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA...ATGTACCCAGTATTCTAGGTAGTGCCCTATTTTACAATTGTAAAACTGAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
3UTR CAA 72 bp CATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTaGCTGCTGCTACTTATTTCACTGTTGTCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HHSSLCHHSLLS*LLLLISLLSQL
Trigger: AAGCTGGGACAACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR TCA 90 bp TTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGATGGTAAACAAACACTaGTCTCCACAGCTCTTAACA +
Preference number: 4 (lower is better)
Translates to: FEVLNFPLETQFLCRLGLMVNKH*SPQLLT
Trigger: TGTTAAGAGCTGTGGAGATCAGTGTTTGTTTACCAT...CAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR GCA 90 bp TCAAATACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGGTTGCTGGACGCCATTaGCTCATACTGCGTGCGGAT +
Preference number: 4 (lower is better)
Translates to: SNTTSFEVLNFPLETQFLVAGRH*LILRAD
Trigger: ATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAAC...CAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGTATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp GTGCCTCAGTTTTACAATTGTAAAATAGGGCACTACCTAGAATACTGGGTACATGACAAAACAAGCCTCTaGCCAGGGCTACCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: VPQFYNCKIGHYLEYWVHDKTSL*PGLPCL
Trigger: CAGACAAGGTAGCCCTGGCCAGAGGCTTGTTTTGTC...ATGTACCCAGTATTCTAGGTAGTGCCCTATTTTACAATTGTAAAACTGAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CCA 90 bp CCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGCCCCAAACCAATGAATaGACATGTAATCAACAAATG +
Preference number: 4 (lower is better)
Translates to: PDRLPAHHSSLCHHSLLSPQTNE*TCNQQM
Trigger: CATTTGTTGATTACATGTCCATTCATTGGTTTGGGG...CGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
3UTR CAA 72 bp TCTTCAGCTCTGAAGACCAGTTGTCCTTCAATGTGTTaGTTAAATGATACCAGATGTCTCTGGGTGGGTACC +
Preference number: 4 (lower is better)
Translates to: SSALKTSCPSMC*LNDTRCLWVGT
Trigger: GGTACCCACCCAGAGACATCTGGTATCATTTAACAAACACATTGAAGGACAACTGGTCTTCAGAGCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR TCA 90 bp GAGATCAGGTCTGGAATGTTAGAAGGGCATCTTGTACATCCACTGGGAATAAATCATGGGCCCCAGAGATaGTCAGTAATAAGAAATGAG +
Preference number: 4 (lower is better)
Translates to: EIRSGMLEGHLVHPLGINHGPQR*SVIRNE
Trigger: CTCATTTCTTATTACTGATCATCTCTGGGGCCCATG...ATTTATTCCCAGTGGATGTACAAGATGCCCTTCTAACATTCCAGACCTGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR GCA 90 bp GCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACACCACTAACAAGCTCTaGCAGTTTAATGTACAGTTA +
Preference number: 4 (lower is better)
Translates to: APKDSPPLPLTSSASLMYTTNKL*QFNVQL
Trigger: TAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGT...GTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CCA 90 bp TCAAATACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTCAGGTCTGCAAACTTaGAGCGGTACCACTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SNTTSFEVLNFPLETQFLSGLQT*SGTTLR
Trigger: CCGAAGAGTGGTACCGCTCCAAGTTTGCAGACCTGA...CAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CCA 90 bp GCTCTTAACAAGAATGTTTATAGCCCCAAACCAATGAATGGACATGTAATCAACCTCGAATCTGCAGGTTaGAGAAGGTCTGCACGGGAA +
Preference number: 4 (lower is better)
Translates to: ALNKNVYSPKPMNGHVINLESAG*RRSARE
Trigger: TTCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAG...GTTGATTACATGTCCATTCATTGGTTTGGGGCTATAAACATTCTTGTTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639277.1
CDS-3UTR CCA 90 bp GCTCTTAACAAGAATGTTTATAGCCCCAAACCAATGAATGGACATGTAATCAACAGATATGCAGGAGGGTaGGTTTCCTTCATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: ALNKNVYSPKPMNGHVINRYAGG*VSFIPQ
Trigger: CTGGGGGATGAAGGAAACCCACCCTCCTGCATATCT...GTTGATTACATGTCCATTCATTGGTTTGGGGCTATAAACATTCTTGTTAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000639277.1
CDS-3UTR GCA 90 bp GCTCTTAACAAGAATGTTTATAGCCCCAAACCAATGAATGGACATGTAATCAACGGGAATAAATTGCCTTaGACTTGGCGGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ALNKNVYSPKPMNGHVINGNKLP*TWRLPL
Trigger: CAGAGGAAGCCGCCAAGTGCAAGGCAATTTATTCCC...GTTGATTACATGTCCATTCATTGGTTTGGGGCTATAAACATTCTTGTTAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
3UTR CAA 72 bp ATCAGTGTTGAATCATGTTTGAGCTGCTTTGCTTTCTaGCCTATGAAGATTGTGCTGGTTGAGTTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: ISVESCLSCFAF*PMKIVLVELQV
Trigger: TACCTGCAACTCAACCAGCACAATCTTCATAGGCAAGAAAGCAAAGCAGCTCAAACATGATTCAACACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR GCA 90 bp ACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGATTCACTTCTGTCGTTaGTGCTGCTACTTATTTCAC +
Preference number: 4 (lower is better)
Translates to: TTSFEVLNFPLETQFLCRIHFCR*CCYLFH
Trigger: GTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAAT...CCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR GCA 90 bp CAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTACTTATTTCACTGTTATTCACTTCTGTCGTTaGTGCTGCTACTTATTTCAC +
Preference number: 4 (lower is better)
Translates to: QSLSPFTSVVAAATYFTVIHFCR*CCYLFH
Trigger: GTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAAT...AACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CCA 90 bp GCTCTTAACAAGAATGTTTATAGCCCCAAACCAATGAATGGACATGTAATCAACCTTCATGCATGTTGCTaGACGCCATTGCCTCATACT +
Preference number: 4 (lower is better)
Translates to: ALNKNVYSPKPMNGHVINLHACC*TPLPHT
Trigger: AGTATGAGGCAATGGCGTCCAGCAACATGCATGAAG...GTTGATTACATGTCCATTCATTGGTTTGGGGCTATAAACATTCTTGTTAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp TTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCGGCTGTTGGCGGTGAGTaGATCGAGCCGCAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: FLQPRQRLLITGRLPHVPAVGGE*IEPQPQ
Trigger: CTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGC...CGGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp AAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGGAGCAGCTCCGCGTaGCGGGCAGCAGCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: KLGKAPCLRGRQLTASRRRSSSA*RAAASV
Trigger: GACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCG...CCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp TTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCGTCGTTGGCTTCGTGCTaGGCCTGGCGGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FLQPRQRLLITGRLPHVPSLASC*AWRSSS
Trigger: GGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAACGA...CGGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp CTTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCCTCCCGCACGTGCCCGGGCCATCTCGTCCTaGAGGCTCTGCCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPPAAPAPPDNWPPPARARAISS*RLCPSS
Trigger: GGAAGAGGGGCAGAGCCTCAAGGACGAGATGGCCCG...GGCACGTGCGGGAGGCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS GCA 90 bp CTCTGCCCGCTCACTGGCCCGGGTCTCCTTGAAGCCAGCATTGAGTaGCCCAGCCAGGGAGAAATCCACCCGGGTCGGGAGTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LCPLTGPGLLEASIE*PSQGEIHPGREWRG
Trigger: CCCCCTCCACTCCCGACCCGGGTGGATTTCTCCCTGGCTGGGGCACTCAATGCTGGCTTCAAGGAGACCCGGGCCAGTGAGCGGGCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000639277.1
ENST00000640552.1
CDS CCA 90 bp AGCATTGAGTGCCCCAGCCAGGGAGAAATCCACCCGGGTCGGGAGTaGAGGGGGCATTCGAGCCAGGGAGAGGCGGGTGCCAGGACCCAG +
Preference number: 5 (lower is better)
Translates to: SIECPSQGEIHPGRE*RGHSSQGEAGARTQ
Trigger: CTGGGTCCTGGCACCCGCCTCTCCCTGGCTCGAATGCCCCCTCCACTCCCGACCCGGGTGGATTTCTCCCTGGCTGGGGCACTCAATGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000585728.5
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000639277.1
ENST00000640552.1
CDS CCA 90 bp GCAGCCGCAGCTCTCGCAGCTCAGCCTGGTAGACGTCTGCCAGCTTaGTGGGCTCCTTGGCCCGCAGCTGGTTCAGCTCAGCAGCCAGCG +
Preference number: 5 (lower is better)
Translates to: AAAALAAQPGRRLPA*WAPWPAAGSAQQPA
Trigger: CGCTGGCTGCTGAGCTGAACCAGCTGCGGGCCAAGGAGCCCACCAAGCTGGCAGACGTCTACCAGGCTGAGCTGCGAGAGCTGCGGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000639277.1
ENST00000640552.1
CDS-3UTR CAA 90 bp CAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCCGGAGCAGCTCCGCGTaGCGGGCAGCAGCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: QVGPGKVPSHQLRSSQPPRSSSA*RAAASV
Trigger: GACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCG...GGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp GAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGACGGGCCATCTCGTCCTaGAGGCTCTGCCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ESLASRHSETQGALPVTGRAISS*RLCPSS
Trigger: GGAAGAGGGGCAGAGCCTCAAGGACGAGATGGCCCG...TCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS GCA 90 bp ATCGAGCCGCAGCCGCAGCTCTCGCAGCTCAGCCTGGTAGACGTCTaGCAGCTTGGTGGGCTCCTTGGCCCGCAGCTGGTTCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: IEPQPQLSQLSLVDV*QLGGLLGPQLVQLS
Trigger: GCTGAGCTGAACCAGCTGCGGGCCAAGGAGCCCACCAAGCTGGCAGACGTCTACCAGGCTGAGCTGCGAGAGCTGCGGCTGCGGCTCGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000639277.1
ENST00000640552.1
CDS GCA 90 bp TCGCCTGGCCTCACCCTGGGTTCTAATAGCCCTTTCTCCCCTGCCTaGAGGGAGGTCCTCCCAGCCCCATCGGGCCCTCACCCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: SPGLTLGSNSPFSPA*REVLPAPSGPHPAQ
Trigger: CTGAGCAGGGTGAGGGCCCGATGGGGCTGGGAGGACCTCCCTGCAGGCAGGGGAGAAAGGGCTATTAGAACCCAGGGTGAGGCCAGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591719.5
CDS-3UTR CAA 90 bp CCTCTCAACCTCCAGCCGGGCGCTGTTGGCGGTGAGTTGATCGAGCCGCAGCCGGCGGTGAGGTCTGGCTaGGCCACGTCAAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: PLNLQPGAVGGELIEPQPAVRSG*ATSSST
Trigger: TGTGGAGCTTGACGTGGCCAAGCCAGACCTCACCGC...CGGCTGCGGCTCGATCAACTCACCGCCAACAGCGCCCGGCTGGAGGTTGAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR CAA 90 bp GGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGTCGTTGGCTTCGTGCTaGGCCTGGCGGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GWAWESPKPSAQVQPASRSLASC*AWRSSS
Trigger: GGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAACGA...CCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS TCA 90 bp GTGCCAGATTGTCCCTCTCAACCTCCAGCCGGGCGCTGTTGGCGGTaGGTTGATCGAGCCGCAGCCGCAGCTCTCGCAGCTCAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: VPDCPSQPPAGRCWR*VDRAAAAALAAQPG
Trigger: ACCAGGCTGAGCTGCGAGAGCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGCGCCCGGCTGGAGGTTGAGAGGGACAATCTGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000638618.1
ENST00000639277.1
ENST00000640552.1
CDS TCA 90 bp GTGCCAGATTGTCCCTCTCAACCTCCAGCCGGGCGCTGTTGGCGGTaGGTTGATCGAGCCGCAGCCGCAGCTCTCGCAGCTCAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: VPDCPSQPPAGRCWR*VDRAAAAALAAQPA
Trigger: TGCTGGCTGAGCTGCGAGAGCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGCGCCCGGCTGGAGGTTGAGAGGGACAATCTGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR CAA 90 bp CCAGGGACTCGTTCGTGCCGCGCAGAGACTCCAGGTCGCAGGTCAAGGACTGCAAGCTTGGTGGGCTCCTaGGCCCGCAGCTGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: PGTRSCRAETPGRRSRTASLVGS*ARSWFS
Trigger: GCTGAACCAGCTGCGGGCCAAGGAGCCCACCAAGCT...TGCAGTCCTTGACCTGCGACCTGGAGTCTCTGCGCGGCACGAACGAGTCCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp GGCTTCGTGCTTGGCCTGGCGGAGCAGCTCCGCGTTGCGGGCAGCAGCGTCTGTAGGTCCTGTGCCAGATaGTCCCTCTCAACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GFVLGLAEQLRVAGSSVCRSCAR*SLSTSS
Trigger: GCTGGAGGTTGAGAGGGACAATCTGGCACAGGACCT...ACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp GAGGCTCTGCCCCTCTTCCTCCAGCCGCGCCAGCGCCTCCTGATAACTGGCCGCTGTTGCTGGACGCCATaGCCTCATACTGCGTGCGGA +
Preference number: 5 (lower is better)
Translates to: EALPLFLQPRQRLLITGRCCWTP*PHTACG
Trigger: TCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACA...GCGGCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAAGAGGGGCAGAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp GCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCCGGGCCATCTCGTCCTaGAGGCTCTGCCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: AQVQPASRMARYAGGWVSRAISS*RLCPSS
Trigger: GGAAGAGGGGCAGAGCCTCAAGGACGAGATGGCCCG...GGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp TCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCAGTGGCGCACCGGGGCATCTACTATaGCTGGAGGCAGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: SGNGPPVTAAECVGSSGAPGHLL*LEAGCA
Trigger: AGCACACCCTGCCTCCAGCAATAGTAGATGCCCCGG...TGCGCCACTGCTCCCCACGCACTCCGCAGCGGTCACAGGGGGTCCATTCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CAA 90 bp AGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCGCTGTTGGCGGTGAGTaGATCGAGCCGCAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: SSGPASLPDGQICRRVGFAVGGE*IEPQPQ
Trigger: CTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGC...GAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp TCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGTCGTTGGCTTCGTGCTaGGCCTGGCGGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SQAISSGPASLPDGQICRSLASC*AWRSSS
Trigger: GGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAACGA...CCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp GCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAAGGCCAGGGACCACACGCCTGGGTGGGTACCCTGGGTaGGGACAGGTGGTAGGAACA +
Preference number: 5 (lower is better)
Translates to: AQGLCQGSCGPRPGTTRLGGYPG*GQVVGT
Trigger: TGTTCCTACCACCTGTCCCAACCCAGGGTACCCACC...CAGGCGTGTGGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCCCTTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS TCA 90 bp AGATTGTCCCTCTCAACCTCCAGCCGGGCGCTGTTGGCGGTGAGTTaGTCGAGCCGCAGCCGCAGCTCTCGCAGCTCAGCCAGCATTGAG +
Preference number: 5 (lower is better)
Translates to: RLSLSTSSRALLAVS*SSRSRSSRSSASIE
Trigger: CTCAATGCTGGCTGAGCTGCGAGAGCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGCGCCCGGCTGGAGGTTGAGAGGGACAATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS TCA 90 bp GGCTGTGCCAAGGAAGCTGCGGACCAAGGCCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTGCTTAGTACCCTCTCCATCCCGCAT +
Preference number: 5 (lower is better)
Translates to: GCAKEAADQGQGPHA*GAGSELLSTLSIPH
Trigger: ATGCGGGATGGAGAGGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCGCAGCTTCCTTGGCACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639277.1
ENST00000640545.1
CDS-3UTR CAA 90 bp ATAAAGCAGAGAGCCTGGCGTCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTCCTTGAAGCCAGCATaGAGTGCCCCAGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: IKQRAWRPGTARPKGPSQSLKPA*SAPARE
Trigger: CTCCCTGGCTGGGGCACTCAATGCTGGCTTCAAGGA...CTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGACGCCAGGCTCTCTGCTTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp AGCTCCGCGTTGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTGGAGCGGTACCTGGCCCGGGTCTCCTaGAAGCCAGCATTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: SSALRAAASVRSANLERYLARVS*KPALSA
Trigger: GGCACTCAATGCTGGCTTCAAGGAGACCCGGGCCAG...GTACCGCTCCAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp TCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCAGCTTGGTGGGCTCCTaGGCCCGCAGCTGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SLPVKLGKAPCLRGRQLTSLVGS*ARSWFS
Trigger: GCTGAACCAGCTGCGGGCCAAGGAGCCCACCAAGCT...GGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp TCGGGCCAGCTGCTCCTGGAGTTCCCGAACCTCCTCCTCGTGGATCTTCCTCAAGCTGTTGGCGGTGAGTaGATCGAGCCGCAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: SGQLLLEFPNLLLVDLPQAVGGE*IEPQPQ
Trigger: CTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGC...TTGAGGAAGATCCACGAGGAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR CAA 90 bp AGCTCCGCGTTGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTGGAGCGGTACGCGGTGAGGTCTGGCTaGGCCACGTCAAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: SSALRAAASVRSANLERYAVRSG*ATSSST
Trigger: TGTGGAGCTTGACGTGGCCAAGCCAGACCTCACCGC...GTACCGCTCCAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp TGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCGCGGTGAGGTCTGGCTaGGCCACGTCAAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: CAGWAWESPKPSAQVQPAAVRSG*ATSSST
Trigger: TGTGGAGCTTGACGTGGCCAAGCCAGACCTCACCGC...GGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp GCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATCCAGAACACGGAGCAGCTCCGCGTaGCGGGCAGCAGCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: AAPARGTTFTPTMWTSRTRSSSA*RAAASV
Trigger: GACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCG...TGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp TGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: CAGWAWESPKPSAQVQPAARCGV*WLKGCA
Trigger: GGCACAGCCCTTGAGCCACAAGACACCACATCGGGC...GGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: AQSEDSGLYFCGTRKGDYARCGV*WLKGCA
Trigger: GGCACAGCCCTTGAGCCACAAGACACCACATCGGGC...GTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGAATATGAGCCAGTGTGTAACCACAGCTGCCTaGCGTGGTGGACAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: DVSALSTRPPGCRNMSQCVTTAA*RGGQRG
Trigger: CCCCCTCTGTCCACCACGCAAGGCAGCTGTGGTTAC...ACACTGGCTCATATTCCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CAA 90 bp CCCAGGTCCACCACCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTAACCACAGCTGCCTaGCGTGGTGGACAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: PRSTTTRLCNLGKSPTSQVTTAA*RGGQRG
Trigger: CCCCCTCTGTCCACCACGCAAGGCAGCTGTGGTTAC...CTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGGTGGTGGACCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CAA 90 bp GACTCGTTCGTGCCGCGCAGAGACTCCAGGTCGCAGGTCAAGGACTGCAACTGGTCCTTGAAGCCAGCATaGAGTGCCCCAGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: DSFVPRRDSRSQVKDCNWSLKPA*SAPARE
Trigger: CTCCCTGGCTGGGGCACTCAATGCTGGCTTCAAGGA...CCAGTTGCAGTCCTTGACCTGCGACCTGGAGTCTCTGCGCGGCACGAACGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp CTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGGCTGTTGGCGGTGAGTaGATCGAGCCGCAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: LRTQACTSAAPARGTTFTAVGGE*IEPQPQ
Trigger: CTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGC...CGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp TCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATCTGGTGCTGTTGGCGGTGAGTaGATCGAGCCGCAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: SERQAANREPAAFHLQSGAVGGE*IEPQPQ
Trigger: CTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGC...ACCAGATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp CCACCAGTCTGCTCACCAGTCTGCTCAGTCAAAGCAGAGTGGGTGCACTGGGGTCGGGCCATCTCGTCCTaGAGGCTCTGCCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PPVCSPVCSVKAEWVHWGRAISS*RLCPSS
Trigger: GGAAGAGGGGCAGAGCCTCAAGGACGAGATGGCCCG...ACCCCAGTGCACCCACTCTGCTTTGACTGAGCAGACTGGTGAGCAGACTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp TGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCCCGGGGCATCTACTATaGCTGGAGGCAGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: CAGWAWESPKPSAQVQPAPGHLL*LEAGCA
Trigger: AGCACACCCTGCCTCCAGCAATAGTAGATGCCCCGG...GGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp CAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTTCCCGGGGCATCTACTATaGCTGGAGGCAGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: QVQPASRMARYAGGWVSFPGHLL*LEAGCA
Trigger: AGCACACCCTGCCTCCAGCAATAGTAGATGCCCCGG...GAAGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: AWDKDRQHLYRTQYLKGVARCGV*WLKGCA
Trigger: GGCACAGCCCTTGAGCCACAAGACACCACATCGGGC...GACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CAA 90 bp AAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: KSQAISSGPASLPDGQICARCGV*WLKGCA
Trigger: GGCACAGCCCTTGAGCCACAAGACACCACATCGGGC...GCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp CATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTAATGCCCTGGTTTaGCCCTGCCCCTCTGACCCC +
Preference number: 5 (lower is better)
Translates to: HQLRSSQPPGWPDMQEGGFNALV*PCPSDP
Trigger: GGGGTCAGAGGGGCAGGGCAAAACCAGGGCATTAAA...CCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CAA 90 bp GGCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGCCCCTAGGCTGGGTCTaGGTGCGGGGCCATCATGAC +
Preference number: 5 (lower is better)
Translates to: GSACSGICRQGRCQALTQPLGWV*VRGHHD
Trigger: GTCATGATGGCCCCGCACCAAGACCCAGCCTAGGGG...CTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS GCA 90 bp GTCCTGGCTGCTCTGTCTTCTGGCCTGGCTTCATTTCAGCCCCTCTaGAAGCCCTGGCCTGGCACCTGGCTTTCTGAAAACCCAGCACGG +
Preference number: 5 (lower is better)
Translates to: VLAALSSGLASFQPL*KPWPGTWLSENPAR
Trigger: CCGTGCTGGGTTTTCAGAAAGCCAGGTGCCAGGCCAGGGCTTGCAGAGGGGCTGAAATGAAGCCAGGCCAGAAGACAGAGCAGCCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000589701.2
ENST00000592065.2
ENST00000640552.1
CDS GCA 90 bp CTAGGTGCCCTGGCTAGGCTAGCATCTTGGGGCCCTGCCTCTCTGTaGTTTTCTGCCTCCAGGCTCTGTCCTCCACTAGGAATGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LGALARLASWGPASL*FSASRLCPPLGMAL
Trigger: GAGGGCCATTCCTAGTGGAGGACAGAGCCTGGAGGCAGAAAAGCACAGAGAGGCAGGGCCCCAAGATGCTAGCCTAGCCAGGGCACCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591719.5
CDS-3UTR CAA 90 bp CTCGTTCGTGCCGCGCAGAGACTCCAGGTCGCAGGTCAAGGACTGCAACTGGCGCTGGCAAAGCGGTCATaGAGCTCCATCATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LVRAAQRLQVAGQGLQLALAKRS*SSIISA
Trigger: GGCAGAGATGATGGAGCTCAATGACCGCTTTGCCAG...CGCCAGTTGCAGTCCTTGACCTGCGACCTGGAGTCTCTGCGCGGCACGAACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp GCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCCTGGCAAAGCGGTCATaGAGCTCCATCATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: AQVQPASRMARYAGGWVSLAKRS*SSIISA
Trigger: GGCAGAGATGATGGAGCTCAATGACCGCTTTGCCAG...GGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp CCAGGGACTCGTTCGTGCCGCGCAGAGACTCCAGGTCGCAGGTCAAGGACTGCATCAGCAGCCAGCGCCTaGTTTTGCTGTTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PGTRSCRAETPGRRSRTASAASA*FCCSRK
Trigger: CTTCCTGGAACAGCAAAACAAGGCGCTGGCTGCTGA...TGCAGTCCTTGACCTGCGACCTGGAGTCTCTGCGCGGCACGAACGAGTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp TGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCAGGTCCTGTGCCAGATaGTCCCTCTCAACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CAGWAWESPKPSAQVQPARSCAR*SLSTSS
Trigger: GCTGGAGGTTGAGAGGGACAATCTGGCACAGGACCT...GGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp GCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCGTCAGGTCTGCAAACTaGGAGCGGTACCACTCTTCG +
Preference number: 5 (lower is better)
Translates to: AQVQPASRMARYAGGWVSVRSAN*ERYHSS
Trigger: CGAAGAGTGGTACCGCTCCAAGTTTGCAGACCTGAC...GGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp CATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGGTCAGGTCTGCAAACTaGGAGCGGTACCACTCTTCG +
Preference number: 5 (lower is better)
Translates to: HQLRSSQPPGWPDMQEGGVRSAN*ERYHSS
Trigger: CGAAGAGTGGTACCGCTCCAAGTTTGCAGACCTGAC...CCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp GCAGCTCCACTGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCTCGTTGGCTTCGTGCTaGGCCTGGCGGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: AAPLRTQGLTTFTTNKLCSLASC*AWRSSS
Trigger: GGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAACGA...GCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCAGTGGAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp TCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGAGCCGGGGCATCTACTATaGCTGGAGGCAGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: SPRLMKDFSTRLAGQGLEPGHLL*LEAGCA
Trigger: AGCACACCCTGCCTCCAGCAATAGTAGATGCCCCGG...CTCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTAGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: GLRPVLLRHPQGGLLLRLARCGV*WLKGCA
Trigger: GGCACAGCCCTTGAGCCACAAGACACCACATCGGGC...TAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CAA 90 bp CCACCACCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCCAGGTCTTACGAGCTCCCACTGTGGTaGGAGTGGCGTGGCGGATAC +
Preference number: 5 (lower is better)
Translates to: PPPRGCVTLGSPRLPRSYELPLW*EWRGGY
Trigger: GTATCCGCCACGCCACTCCAACCACAGTGGGAGCTC...GTAAGACCTGGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGGTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CAA 90 bp CAGAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGCGAGGCTGTGTAACCTaGGGAAGTCCCCGACTTCCC +
Preference number: 5 (lower is better)
Translates to: QRPPGGSCLTSHPCAPAWRGCVT*GSPRLP
Trigger: GGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCG...CCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS TCA 90 bp CATCTCCACGGTCTTCACCACGATGTTCCTCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAGGCTGGTTTCGCGAGCCGGCGGCGT +
Preference number: 5 (lower is better)
Translates to: HLHGLHHDVPLEVAF*HRLGVQAGFASRRR
Trigger: ACGCCGCCGGCTCGCGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253408.11
CDS GCA 90 bp GGGGCAGAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTaGTCCTGCTTGGACTCCTTAATGACCTCTCCATCCCGCATCTCC +
Preference number: 5 (lower is better)
Translates to: GAEATRWVLPHITSL*SCLDSLMTSPSRIS
Trigger: GGAGATGCGGGATGGAGAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253408.11
ENST00000585543.6
ENST00000588735.3
ENST00000589701.2
ENST00000592706.5
CDS-3UTR CAA 90 bp CGGACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTATCAGCAGCCAGCGCCTaGTTTTGCTGTTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RTKARDHTPEVLVRSCLVSAASA*FCCSRK
Trigger: CTTCCTGGAACAGCAAAACAAGGCGCTGGCTGCTGA...TACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp TCCAGGCACAGCGAGACCCAAGGGGCCCTCCCAGTGACAGGAAGAGGTGAGACATCAGCAGCCAGCGCCTaGTTTTGCTGTTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SRHSETQGALPVTGRGETSAASA*FCCSRK
Trigger: CTTCCTGGAACAGCAAAACAAGGCGCTGGCTGCTGA...TGTCTCACCTCTTCCTGTCACTGGGAGGGCCCCTTGGGTCTCGCTGTGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp CAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTTCAGCAGCCAGCGCCTaGTTTTGCTGTTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: QLRSSQPPGWPDMQEGGFSAASA*FCCSRK
Trigger: CTTCCTGGAACAGCAAAACAAGGCGCTGGCTGCTGA...AAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp ACGTCCTGGGCTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTAGGTCCTGTGCCAGATaGTCCCTCTCAACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TSWAGHCSSWENDAVQALRSCAR*SLSTSS
Trigger: GCTGGAGGTTGAGAGGGACAATCTGGCACAGGACCT...AAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAGCCCAGGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp AGGGGAGAGGAGAACCCTGAAGTGGGCCCTCCCAGTCCCATCTCTGGGCACAGAGCTTCCAGCCTCAGGTaGGTTTCATCCTGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: RGEENPEVGPPSPISGHRASSLR*VSSWSF
Trigger: GAAGCTCCAGGATGAAACCAACCTGAGGCTGGAAGC...TCTGTGCCCAGAGATGGGACTGGGAGGGCCCACTTCAGGGTTCTCCTCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp GGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATGCTTCCAGCCTCAGGTaGGTTTCATCCTGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: GKVPSHQLRSSQPPGWPDASSLR*VSSWSF
Trigger: GAAGCTCCAGGATGAAACCAACCTGAGGCTGGAAGC...ATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp CTTCATGCATGTTGCTGGACGCCATTGCCTCATACTGCGTGCGGATCTCTTTCACGGAGCAGCTCCGCGTaGCGGGCAGCAGCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LHACCWTPLPHTACGSLSRSSSA*RAAASV
Trigger: GACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCG...TGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp TCACTCCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCCCTCGAATCTGCAGGTaGGAGAAGGTCTGCACGGGA +
Preference number: 5 (lower is better)
Translates to: SLPVKLGKAPCLRGRQLTPRICR*EKVCTG
Trigger: TCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGG...GGTTAGCTGCCTGCCTCTCAGACACGGCGCTTTGCCCAGCTTGACAGGGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CAA 90 bp AGCAACTATCCTGCTTCTGCTCGGGCCCCTCATGAGACGGGGCAGAGGCCACCACCTCCAGACTGCCCCTaGGGGGTGAGTTTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: SNYPASARAPHETGQRPPPPDCP*GVSFLL
Trigger: TAACAAGAAACTCACCCCCAAGGGGCAGTCTGGAGG...TGGTGGCCTCTGCCCCGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CAA 90 bp CTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTCCTCCAGACTGCCCCTaGGGGGTGAGTTTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: LRSSQPPGWPDMQEGGFPPPDCP*GVSFLL
Trigger: TAACAAGAAACTCACCCCCAAGGGGCAGTCTGGAGG...AGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp TGCCAGCAGAGGCGGAGCAACTATCCTGCTTCTGCTCGGGCCCCTCATGAGACGAGGTGGGTAGACTGCTaGAGCCCAGGAGTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: CQQRRSNYPASARAPHETRWVDC*SPGVQG
Trigger: ACCTTGAACTCCTGGGCTCAAGCAGTCTACCCACCT...CGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGCCTCTGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CAA 90 bp GTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTGAGACACTTGAGGCAGTCCTCCTGGGCTaGACCTCTCTGTACCCACAG +
Preference number: 5 (lower is better)
Translates to: VPTDGIPGWQLRWTETLEAVLLG*TSLYPQ
Trigger: CTGTGGGTACAGAGAGGTCAAGCCCAGGAGGACTGC...CTCAAGTGTCTCAGTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CAA 90 bp AGAGGCGGAGCAACTATCCTGCTTCTGCTCGGGCCCCTCATGAGACGGGGCAGACTAGCGCCATCCCAATaGCCTCCTCCTCCATCTCTA +
Preference number: 5 (lower is better)
Translates to: RGGATILLLLGPLMRRGRLAPSQ*PPPPSL
Trigger: TAGAGATGGAGGAGGAGGCAATTGGGATGGCGCTAG...TCTGCCCCGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CAA 90 bp GTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCCGGGGCATCTACTATaGCTGGAGGCAGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: VLVQVGPGKVPSHQLRSSPGHLL*LEAGCA
Trigger: AGCACACCCTGCCTCCAGCAATAGTAGATGCCCCGG...GCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp ATCCCTCCCAGCACCTCATCCCTCTCCACGTACACAACAGATCCCCCAAGTGCTGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: IPPSTSSLSTYTTDPPSAARCGV*WLKGCA
Trigger: GGCACAGCCCTTGAGCCACAAGACACCACATCGGGC...AGCACTTGGGGGATCTGTTGTGTACGTGGAGAGGGATGAGGTGCTGGGAGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp CAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCAGTTCTTGTGCAGGTaGGGCCTGGGAAAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: QLRSSQPPGWPDMQEGGFQFLCR*GLGKSQ
Trigger: TTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTG...AAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp TGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCTCGAATCTGCAGGTaGGAGAAGGTCTGCACGGGA +
Preference number: 5 (lower is better)
Translates to: CAGWAWESPKPSAQVQPASRICR*EKVCTG
Trigger: TCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGA...GGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639277.1
CDS-3UTR CAA 90 bp GGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTCCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: GLSLRTQACTSAAPARGTPSDTD*VSRLVS
Trigger: AGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGG...AGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CAA 90 bp ACCTGCCCACAGCGTGCCCACAGATGGCATCCCTGGATGGCAGCTCAGGTGGACTCCTTGTGCTCCTGCTaGGACTCCTTAATGACCTGC +
Preference number: 5 (lower is better)
Translates to: TCPQRAHRWHPWMAAQVDSLCSC*DSLMTC
Trigger: GCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGA...GTCCACCTGAGCTGCCATCCAGGGATGCCATCTGTGGGCACGCTGTGGGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS CCA 90 bp CCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCGCGAGCC +
Preference number: 5 (lower is better)
Translates to: PSRISTVFTTMFLLR*PSDTDLVSRLVSRA
Trigger: GGCTCGCGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253408.11
CDS-3UTR CAA 90 bp AGAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTCTGGCAAAGCGGTCATaGAGCTCCATCATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RDLPARAPRPALLIPVSFLAKRS*SSIISA
Trigger: GGCAGAGATGATGGAGCTCAATGACCGCTTTGCCAG...AAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp ACTGTGCTCCTGTGGGCATGGGGGCTCCAGGCCTTTGAAATTGTGGAGAAGGAAGCGGTGAGGTCTGGCTaGGCCACGTCAAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: TVLLWAWGLQAFEIVEKEAVRSG*ATSSST
Trigger: TGTGGAGCTTGACGTGGCCAAGCCAGACCTCACCGC...TTCCTTCTCCACAATTTCAAAGGCCTGGAGCCCCCATGCCCACAGGAGCACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp CTGGACGCCATTGCCTCATACTGCGTGCGGATCTCTTTCAGGGCTGCGGTGAGGTCGGCTTCATGCATGTaGCTGGACGCCATTGCCTCA +
Preference number: 5 (lower is better)
Translates to: LDAIASYCVRISFRAAVRSASCM*LDAIAS
Trigger: TGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGA...CCTCACCGCAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp GGGCTGGGCACTGCAGTTCCTGGGAAAATGACGCAGTCCAGGCCCTTTAGGGGATCGGCTTCATGCATGTaGCTGGACGCCATTGCCTCA +
Preference number: 5 (lower is better)
Translates to: GLGTAVPGKMTQSRPFRGSASCM*LDAIAS
Trigger: TGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGA...TCCCCTAAAGGGCCTGGACTGCGTCATTTTCCCAGGAACTGCAGTGCCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp ATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: ISLPEHLGPPFSFRFPLTTTMFL*RWPSDT
Trigger: TGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGT...GGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp CGGGGCATCTACTATTGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGGGTGGACTGAGACACTaGAGTCATCGCTCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: RGIYYCWRQGVLVAGFRLGGLRH*SHRSGG
Trigger: ACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACC...CAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp GCAGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGCTAGCGCCATCCCAATaGCCTCCTCCTCCATCTCTA +
Preference number: 5 (lower is better)
Translates to: AVAWDKDRQHLYRTQYLKLAPSQ*PPPPSL
Trigger: TAGAGATGGAGGAGGAGGCAATTGGGATGGCGCTAG...CTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp TCAGGAGGTCCTTCTGGGATCTGGGCAGGTGACTGCCCCAGGTGGCAGGACGTCGCCAGTGTCTTCACTTaGCTCGTGCCTCAGTTTTAC +
Preference number: 5 (lower is better)
Translates to: SGGPSGIWAGDCPRWQDVASVFT*LVPQFY
Trigger: GTAAAACTGAGGCACGAGCAAAGTGAAGACACTGGC...GACGTCCTGCCACCTGGGGCAGTCACCTGCCCAGATCCCAGAAGGACCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CAA 90 bp ATGAGGGTGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGCCGGGGCATCTACTATaGCTGGAGGCAGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: MRVFIDHGNQLHIRFTQLPGHLL*LEAGCA
Trigger: AGCACACCCTGCCTCCAGCAATAGTAGATGCCCCGG...CAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACACCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GGGTGCACTGGGGTGGACGTGTCAGCCCTGAGCACCCGGCCTCCAGGCTGCAGGACATCATTTGAGGTGTaGAATTTTCCCCTAGAGACT +
Preference number: 5 (lower is better)
Translates to: GCTGVDVSALSTRPPGCRTSFEV*NFPLET
Trigger: AGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT...CCTGCAGCCTGGAGGCCGGGTGCTCAGGGCTGACACGTCCACCCCAGTGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp AGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTCTCGAATCTGCAGGTaGGAGAAGGTCTGCACGGGA +
Preference number: 5 (lower is better)
Translates to: SGLGQRPPAPLPHTVPEGSRICR*EKVCTG
Trigger: TCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGA...CCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CAA 90 bp CGGACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: RTKARDHTPEVLVRSCLVPSDTD*VSRLVS
Trigger: AGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGG...TACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
CDS-3UTR CAA 90 bp AGAGGCGGAGCAACTATCCTGCTTCTGCTCGGGCCCCTCATGAGACGGGGCAGATCCCATCTAGTGGCTTaGGTACCAAGGCTCCCCTTA +
Preference number: 5 (lower is better)
Translates to: RGGATILLLLGPLMRRGRSHLVA*VPRLPL
Trigger: TAAGGGGAGCCTTGGTACCAAAGCCACTAGATGGGA...TCTGCCCCGTCTCATGAGGGGCCCGAGCAGAAGCAGGATAGTTGCTCCGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CAA 90 bp GACCCCAGGTCCACCACCACGAGGCTGTGTAACCTTGGGAAGTCCCCGACTTCCTCCTTGTGCTCCTGCTaGGACTCCTTAATGACCTGC +
Preference number: 5 (lower is better)
Translates to: DPRSTTTRLCNLGKSPTSSLCSC*DSLMTC
Trigger: GCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGA...GGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCGTGGTGGTGGACCTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CAA 90 bp CACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAAGGGCCAGGAGCCCTTaGCAGATGAATACTATGGGC +
Preference number: 5 (lower is better)
Translates to: HLHVFTTFWEWTPCDRCGRARSP*QMNTMG
Trigger: GCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCT...TCCGCAGCGGTCACAGGGGGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CAA 90 bp CCGTGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATTCAGAAGGGCAGTGCTaGCTCAGGGATCTGCAGACA +
Preference number: 5 (lower is better)
Translates to: PCLRGRQLTASRRRSIYNSEGQC*LRDLQT
Trigger: TGTCTGCAGATCCCTGAGCAAGCACTGCCCTTCTGA...ATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CAA 90 bp GATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACTGGTGTATGTCCTCTTaGGCTCTCCATCCCGCATCT +
Preference number: 5 (lower is better)
Translates to: DLPARAPRPALLIPVSFDWCMSS*ALHPAS
Trigger: AGATGCGGGATGGAGAGCCAAAGAGGACATACACCA...GTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639042.1
CDS TCA 90 bp CCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCGC +
Preference number: 5 (lower is better)
Translates to: PLHPASPRSSPRCSS*GGLLTQTWCPGWFR
Trigger: GCGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253408.11
CDS-3UTR CAA 90 bp TTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCTCCTTGAAGCCAGCATaGAGTGCCCCAGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: FPLETQFLCRLGLGKSQASLKPA*SAPARE
Trigger: CTCCCTGGCTGGGGCACTCAATGCTGGCTTCAAGGA...GGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp TGTCTGAGAGGCAGGCAGCTAACCGCGAGCCGGCGGCGTTCCATTTACAATCTGCTGGCAAAGCGGTCATaGAGCTCCATCATCTCTGCC +
Preference number: 5 (lower is better)
Translates to: CLRGRQLTASRRRSIYNLLAKRS*SSIISA
Trigger: GGCAGAGATGATGGAGCTCAATGACCGCTTTGCCAG...CAGATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp GGCAGTGCTTGCTCAGGGATCTGCAGACAGGGCAGATGTCAAGCTCTCACCCAGGTCAGGTCTGCAAACTaGGAGCGGTACCACTCTTCG +
Preference number: 5 (lower is better)
Translates to: GSACSGICRQGRCQALTQVRSAN*ERYHSS
Trigger: CGAAGAGTGGTACCGCTCCAAGTTTGCAGACCTGAC...CTGGGTGAGAGCTTGACATCTGCCCTGTCTGCAGATCCCTGAGCAAGCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp ACATCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTCCTCGAATCTGCAGGTaGGAGAAGGTCTGCACGGGA +
Preference number: 5 (lower is better)
Translates to: TSHGHYPASFSDPETRSAPRICR*EKVCTG
Trigger: TCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGG...AGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639042.1
CDS-3UTR CAA 90 bp GTTCTCAAGGCCGTGCCCGATGTGGTGTCTTGTGGCTCAAGGGCTGTGCCAAGGACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: VLKAVPDVVSCGSRAVPRTTMFL*RWPSDT
Trigger: TGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGT...CCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
CDS-3UTR CAA 90 bp CGGGGCATCTACTATTGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: RGIYYCWRQGVLVAGFRLTTMFL*RWPSDT
Trigger: TGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGT...CAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCAATAGTAGATGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp CTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LTRFSIRMFSLLVFRAQSARCGV*WLKGCA
Trigger: GGCACAGCCCTTGAGCCACAAGACACCACATCGGGC...AGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR CAA 90 bp ACCAAGGCCAGGGACCACACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACCCTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: TKARDHTPEVLVRSCLVPSFRFP*THSWVS
Trigger: GCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGA...GGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp TTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: FRAQSEDSGLYFCGTRKGSFRFP*THSWVS
Trigger: GCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGA...CCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CAA 90 bp TGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGCTGGGTGTGACATCTCATCAGTTCTTGTGCAGGTaGGGCCTGGGAAAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: CWRQGVLVAGFRLGVTSHQFLCR*GLGKSQ
Trigger: TTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTG...ATGAGATGTCACACCCAGCCGGAAGCCAGCAACTAGCACACCCTGCCTCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATCAGTTCTTGTGCAGGTaGGGCCTGGGAAAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: ESPKPSAQVQPASRMARYQFLCR*GLGKSQ
Trigger: TTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTG...ATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGACTCCTTAATGACGAGCTCCCACTGTGGTaGGAGTGGCGTGGCGGATAC +
Preference number: 5 (lower is better)
Translates to: VGPASHHILVLLLGLLNDELPLW*EWRGGY
Trigger: GTATCCGCCACGCCACTCCAACCACAGTGGGAGCTC...GTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CAA 90 bp CACATCCTTGTGCTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACCGAGGCTGTGTAACCTaGGGAAGTCCCCGACTTCCC +
Preference number: 5 (lower is better)
Translates to: HILVLLLGLLNDLQGTGNRGCVT*GSPRLP
Trigger: GGGAAGTCGGGGACTTCCCAAGGTTACACAGCCTCG...GTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CAA 90 bp GCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCTGGTGTATGTCCTCTTaGGCTGCGGGTGGAATTTGG +
Preference number: 5 (lower is better)
Translates to: AWDKDRQHLYRTQYLKGVWCMSS*AAGGIW
Trigger: CCAAATTCCACCCGCAGCCAAAGAGGACATACACCA...GACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp GCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCATTGTGCTGGTTGAGTaGCAGGTAGCAGGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: AWDKDRQHLYRTQYLKGVIVLVE*QVAGRG
Trigger: TCCTCTCCCTGCTACCTGCAACTCAACCAGCACAAT...GACACCCTTCAGGTACTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CAA 90 bp GCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGAGAGGGCCAGGAGCCCTTaGCAGATGAATACTATGGGC +
Preference number: 5 (lower is better)
Translates to: APRPALLIPVSFDPFLGERARSP*QMNTMG
Trigger: GCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCT...CTCACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CAA 90 bp GCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACCGCATGTTCAGCTTGTaGGTTTTCAGGGCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: AQSEDSGLYFCGTRKGDYRMFSL*VFRAQS
Trigger: AGACTGAGCCCTGAAAACCAACAAGCTGAACATGCG...GTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GAGATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGATCCGCATGTTCAGCTaGTTGGTTTTCAGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: EISLPEHLGPPFSFRFPLIRMFS*LVFRAQ
Trigger: CTGAGCCCTGAAAACCAACAAGCTGAACATGCGGAT...CAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS TCA 90 bp CCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PLHPASPRSSPRCSS*GGLLTQTWCPGWFL
Trigger: GAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000585543.6
ENST00000586125.2
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000638618.1
ENST00000639277.1
ENST00000639369.1
CDS TCA 90 bp TTCATTTCAGCCCCTCTGCAAGCCCTGGCCTGGCACCTGGCTTTCTaGAAACCCAGCACGGTATTGAAATCAGGAGACCAGGAGGGGTGC +
Preference number: 5 (lower is better)
Translates to: FISAPLQALAWHLAF*KPSTVLKSGDQEGC
Trigger: GCACCCCTCCTGGTCTCCTGATTTCAATACCGTGCTGGGTTTTCAGAAAGCCAGGTGCCAGGCCAGGGCTTGCAGAGGGGCTGAAATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000589701.2
ENST00000592065.2
ENST00000640552.1
CDS TCA 90 bp CCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: PLHPASPRSSPRCSS*GGLLTQTWCPGWFL
Trigger: CAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589701.2
ENST00000592065.2
ENST00000638921.1
CDS TCA 90 bp CCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: PLHPASPRSSPRCSS*GGLLTQTWCPGWFC
Trigger: GCAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592706.5
CDS TCA 90 bp AGCAGCCAACGTGCTATCTGGAGTTCCAAACGTCTGCAAGGGGCTTaGGTGTTATCTGGGAGGGGCGCATGTCTATCGGTTCTCCTCGCC +
Preference number: 5 (lower is better)
Translates to: SSQRAIWSSKRLQGA*VLSGRGACLSVLLA
Trigger: GGCGAGGAGAACCGATAGACATGCGCCCCTCCCAGATAACACTCAAGCCCCTTGCAGACGTTTGGAACTCCAGATAGCACGTTGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS CCA 90 bp CTTCACAGCTGTGCAAGTCAAAGTAACTTGATGGGGGTCACAAGCTaGTGGCAGGCAGTCACCTGTGCTTTGCGCCCAGACCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: LHSCASQSNLMGVTS*WQAVTCALRPDLPA
Trigger: AGCAGGCAGGTCTGGGCGCAAAGCACAGGTGACTGCCTGCCACCAGCTTGTGACCCCCATCAAGTTACTTTGACTTGCACAGCTGTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS-3UTR CAA 90 bp CGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCCTTGAAGCCAGCATaGAGTGCCCCAGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: RFSIRMFSLLVFRAQSEDSLKPA*SAPARE
Trigger: CTCCCTGGCTGGGGCACTCAATGCTGGCTTCAAGGA...GTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp ACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGCCACTTAGCTTGGTGGGCTCCTaGGCCCGCAGCTGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: TFTPTMWTSRTVREWWPLSLVGS*ARSWFS
Trigger: GCTGAACCAGCTGCGGGCCAAGGAGCCCACCAAGCT...AAGTGGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp GGTGGCTTCATCTGCTTCCTGTCTATAGGCAGCCAGGTTGTTCTCGGCTTCCAGAGGTCCTGTGCCAGATaGTCCCTCTCAACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GGFICFLSIGSQVVLGFQRSCAR*SLSTSS
Trigger: GCTGGAGGTTGAGAGGGACAATCTGGCACAGGACCT...CTGGAAGCCGAGAACAACCTGGCTGCCTATAGACAGGAAGCAGATGAAGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR CAA 90 bp ACGCCTGAGGTGCTGGTTCGGAGCTGCTTAGTACCCTGTGAGAAGACAAAGACCTGTTGCTGGACGCCATaGCCTCATACTGCGTGCGGA +
Preference number: 5 (lower is better)
Translates to: TPEVLVRSCLVPCEKTKTCCWTP*PHTACG
Trigger: TCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACA...GGTCTTTGTCTTCTCACAGGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp TTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCTGTTGCTGGACGCCATaGCCTCATACTGCGTGCGGA +
Preference number: 5 (lower is better)
Translates to: FPLETQFLCRLGLGKSQACCWTP*PHTACG
Trigger: TCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACA...GGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp GCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCCCGTCTTTGGTGCTTTaGCCCCCTCGAATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AVELTLIGYLLITAVFVTPSLVL*PPRICR
Trigger: CCTGCAGATTCGAGGGGGCAAAAGCACCAAAGACGG...GGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639042.1
CDS-3UTR CAA 90 bp GCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGAGACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: APRPALLIPVSFDPFLGETTMFL*RWPSDT
Trigger: TGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGT...CTCACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GCTCAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTCATCACAGCAGTCTTaGTCACCATTCACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: AQVQPASRMARYAGGWVSSSQQS*SPFTSV
Trigger: GACAGAAGTGAATGGTGACAAAGACTGCTGTGATGA...GGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: EVLNFPLETQFLCRLGLGARCGV*WLKGCA
Trigger: GGCACAGCCCTTGAGCCACAAGACACCACATCGGGC...TCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp TTCAGTTCCACCAGCAGAGACTGGGCCATGGACTCATCATCTCCTGTCCTGGGGCAGTTCTTGTGCAGGTaGGGCCTGGGAAAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: FSSTSRDWAMDSSSPVLGQFLCR*GLGKSQ
Trigger: TTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTG...CCCCAGGACAGGAGATGATGAGTCCATGGCCCAGTCTCTGCTGGTGGAACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CAA 90 bp ACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTCAGTTCTTGTGCAGGTaGGGCCTGGGAAAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: TSSTSASPSWMTGASTIAQFLCR*GLGKSQ
Trigger: TTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTG...AGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp AAGCTCTGCCAGTTTAATGTACAGTTACTCTGTACCACGTCCTGGGCTGGGCACGACAGAGGCTGCTGCTaGCTCAGAGGCCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: KLCQFNVQLLCTTSWAGHDRGCC*LRGPRA
Trigger: TGCTCTGGGGCCTCTGAGCAAGCAGCAGCCTCTGTC...GTGCCCAGCCCAGGACGTGGTACAGAGTAACTGTACATTAAACTGGCAGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CAA 90 bp TCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTGTGCCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SHGHYPASFSDPETRSAVPSDTD*VSRLVS
Trigger: AGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGG...CACAGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
CDS-3UTR CAA 90 bp CCCTCCAGACTGCCCCTTGGGGGTGAGTTTCTTGTTAGTTGGAGTTGCTGGGTGGGGAGCTACTGGGAGTaGCTGGGAACCTTCTATGTG +
Preference number: 5 (lower is better)
Translates to: PSRLPLGGEFLVSWSCWVGSYWE*LGTFYV
Trigger: CACATAGAAGGTTCCCAGCAACTCCCAGTAGCTCCC...CACCCAGCAACTCCAACTAACAAGAAACTCACCCCCAAGGGGCAGTCTGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CAA 90 bp AGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGAGGGCCAGGAGCCCTTaGCAGATGAATACTATGGGC +
Preference number: 5 (lower is better)
Translates to: SSCAGWAWESPKPSAQVQRARSP*QMNTMG
Trigger: GCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCT...CTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CAA 90 bp CGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTGGAGGCAGGGTGTGATCCGCATGTTCAGCTaGTTGGTTTTCAGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: RFTQLDDRGIYYCWRQGVIRMFS*LVFRAQ
Trigger: CTGAGCCCTGAAAACCAACAAGCTGAACATGCGGAT...CACACCCTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CAA 90 bp TCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTGTGGGGGGCTCCAGGCCTTaGAAATTGTGGAGAAGGAAA +
Preference number: 5 (lower is better)
Translates to: SHGHYPASFSDPETRSAVGGSRP*KLWRRK
Trigger: TTTCCTTCTCCACAATTTCAAAGGCCTGGAGCCCCC...CACAGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS TCA 90 bp CATCTCCACGGTCTTCACCACGATGTTCCTCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAGGCTGGTTTCTGCAGATGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: HLHGLHHDVPLEVAF*HRLGVQAGFCRCGE
Trigger: CTCCCCACATCTGCAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589701.2
ENST00000592065.2
ENST00000638921.1
CDS TCA 90 bp CATCTCCACGGTCTTCACCACGATGTTCCTCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAGGCTGGTTTTGCAAGAGCTGCGGTC +
Preference number: 5 (lower is better)
Translates to: HLHGLHHDVPLEVAF*HRLGVQAGFARAAV
Trigger: GACCGCAGCTCTTGCAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592706.5
CDS TCA 90 bp GCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTaGGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: ALHPASPRSSPRCSS*GGLLTQTWCPGWFL
Trigger: AAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639042.1
CDS CCA 90 bp CCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCTCGAATC +
Preference number: 5 (lower is better)
Translates to: PSRISTVFTTMFLLR*PSDTDLVSRLVSRI
Trigger: GATTCGAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585543.6
ENST00000586125.2
ENST00000588735.3
ENST00000638304.1
ENST00000638618.1
ENST00000639277.1
ENST00000639369.1
CDS CCA 90 bp CCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCTGCAGAT +
Preference number: 5 (lower is better)
Translates to: PSRISTVFTTMFLLR*PSDTDLVSRLVSAD
Trigger: ATCTGCAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589701.2
ENST00000592065.2
ENST00000638921.1
CDS CCA 90 bp CCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: PSRISTVFTTMFLLR*PSDTDLVSRLVLQE
Trigger: CTCTTGCAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592706.5
CDS-3UTR CAA 90 bp TTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGAGCTTGGTGGGCTCCTaGGCCCGCAGCTGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: FEVLNFPLETQFLCRLGLSLVGS*ARSWFS
Trigger: GCTGAACCAGCTGCGGGCCAAGGAGCCCACCAAGCT...CAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp ATAGGCAGCCAGGTTGTTCTCGGCTTCCAGCCTCAGGTTGGTTTCATCCTGGAGGCTTCCAGCCTCAGGTaGGTTTCATCCTGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: IGSQVVLGFQPQVGFILEASSLR*VSSWSF
Trigger: GAAGCTCCAGGATGAAACCAACCTGAGGCTGGAAGC...CTCCAGGATGAAACCAACCTGAGGCTGGAAGCCGAGAACAACCTGGCTGCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585728.5
CDS-3UTR CAA 90 bp ATTCTCTTTCTCTCCCTGGCAAGCAAGGCCCCCGAGTTTGAGGGTGAGAAAGAGCCTCGAATCTGCAGGTaGGAGAAGGTCTGCACGGGA +
Preference number: 5 (lower is better)
Translates to: ILFLSLASKAPEFEGEKEPRICR*EKVCTG
Trigger: TCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGG...CTCTTTCTCACCCTCAAACTCGGGGGCCTTGCTTGCCAGGGAGAGAAAGAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR CAA 90 bp TGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: CGQRHADPLQHPHVQLVGTTMFL*RWPSDT
Trigger: TGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGT...ACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000640859.1
CDS-3UTR CAA 90 bp TCCACGTACACAACAGATCCCCCAAGTGCTGAGAATCAAGCTCCCACCTGCCCACCTCACATCACATCCTaGTGCTCCTGCTTGGACTCC +
Preference number: 5 (lower is better)
Translates to: STYTTDPPSAENQAPTCPPHITS*CSCLDS
Trigger: GGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGG...TGGGCAGGTGGGAGCTTGATTCTCAGCACTTGGGGGATCTGTTGTGTACGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CAA 90 bp ACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGAAGGGTGGACTGAGACACTaGAGTCATCGCTCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: TMGWRGSDVWQWLTGVKKGGLRH*SHRSGG
Trigger: ACCTCCTGAGCGATGACTCAAGTGTCTCAGTCCACC...CTTCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CAA 90 bp CCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAAAGTGGGCAGCCGCCAGTGTCTTCACTTaGCTCGTGCCTCAGTTTTAC +
Preference number: 5 (lower is better)
Translates to: PSGRACWPSLTMCPKWAAASVFT*LVPQFY
Trigger: GTAAAACTGAGGCACGAGCAAAGTGAAGACACTGGC...GGCTGCCCACTTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp CTCCTGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCACCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: LLLGLLNDLQGTGNVHSAPSDTD*VSRLVF
Trigger: GAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGG...TGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR CAA 90 bp CTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCAAGCTCTGAAGACCAGTaGTCCTTCAATGTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: LPARAPRPALLIPVSFDPSSEDQ*SFNVFV
Trigger: AACAAACACATTGAAGGACAACTGGTCTTCAGAGCT...TGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp TTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGTCATCACAGCAGTCTTaGTCACCATTCACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: FRAQSEDSGLYFCGTRKGSSQQS*SPFTSV
Trigger: GACAGAAGTGAATGGTGACAAAGACTGCTGTGATGA...CCCCTTGCGGGTGCCGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: VLVQVGPGKVPSHQLRSSSFRFP*THSWVS
Trigger: GCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGA...GCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp TGCGCACCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGGACAGAGGCTGCTGCTaGCTCAGAGGCCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: CAPKDSPPLPLTSSASLMDRGCC*LRGPRA
Trigger: TGCTCTGGGGCCTCTGAGCAAGCAGCAGCCTCTGTC...CATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGGTGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CAA 90 bp TGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCAACAGGGGAGCTACTGGGAGTaGCTGGGAACCTTCTATGTG +
Preference number: 5 (lower is better)
Translates to: CLDSLMTCRGQGTCTVQQGSYWE*LGTFYV
Trigger: CACATAGAAGGTTCCCAGCAACTCCCAGTAGCTCCC...CTGTTGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CAA 90 bp GCAGATGAATACTATGGGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCGTCAAAGGCTACATCTaGGCCCCAGTCCCGCCCTCT +
Preference number: 5 (lower is better)
Translates to: ADEYYGHLHVFTTFWEWTVKGYI*APVPPS
Trigger: AGAGGGCGGGACTGGGGCCAAGATGTAGCCTTTGAC...GGTCCATTCCCAGAAGGTGGTGAAGACATGGAGGTGCCCATAGTATTCATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp CCAGAGCATGCAGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGAGCTGCTTTGCTTTCTaGCCTATGAAGATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: PEHAVAWDKDRQHLYRTQSCFAF*PMKIVL
Trigger: CAGCACAATCTTCATAGGCAAGAAAGCAAAGCAGCT...CTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACTGCATGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CAA 90 bp AGACACTTGAGTCATCGCTCAGGAGGTCCTTCTGGGATCTGGGCAGGTGACTGCGGGGGCTCCAGGCCTTaGAAATTGTGGAGAAGGAAA +
Preference number: 5 (lower is better)
Translates to: RHLSHRSGGPSGIWAGDCGGSRP*KLWRRK
Trigger: TTTCCTTCTCCACAATTTCAAAGGCCTGGAGCCCCC...GCAGTCACCTGCCCAGATCCCAGAAGGACCTCCTGAGCGATGACTCAAGTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS CCA 90 bp CCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTTGAGGTaGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: PSRISTVFTTMFLLR*PSDTDLVSRLVSCD
Trigger: ATCACAAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639042.1
CDS-3UTR CAA 90 bp AGCTCTGCCAGTTTAATGTACAGTTACTCTGTACCACGTCCTGGGCTGGGCACTCCTCGAATCTGCAGGTaGGAGAAGGTCTGCACGGGA +
Preference number: 5 (lower is better)
Translates to: SSASLMYSYSVPRPGLGTPRICR*EKVCTG
Trigger: TCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGG...AGTGCCCAGCCCAGGACGTGGTACAGAGTAACTGTACATTAAACTGGCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS-3UTR CAA 90 bp CGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACCCTCACATCACATCCTaGTGCTCCTGCTTGGACTCC +
Preference number: 5 (lower is better)
Translates to: RFSIRMFSLLVFRAQSEDPHITS*CSCLDS
Trigger: GGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGG...GTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp GGAGTTCAAGGTCAGCCTAGGCAGCATAGGGATATCCCACCTCATAAAAACCAACTGGCCAGGGCTACCTaGTCTGTGGGGCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: GVQGQPRQHRDIPPHKNQLARAT*SVGPSL
Trigger: AAGGGAAGGCCCCACAGACAAGGTAGCCCTGGCCAG...TTGGTTTTTATGAGGTGGGATATCCCTATGCTGCCTAGGCTGACCTTGAACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CAA 90 bp ATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCCTGGCCAGGGCTACCTaGTCTGTGGGGCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: IGYLLITAVFVTIHFCRCLARAT*SVGPSL
Trigger: AAGGGAAGGCCCCACAGACAAGGTAGCCCTGGCCAG...GCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp ATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGAGGTGGGTAGACTGCTaGAGCCCAGGAGTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: IRMFSLLVFRAQSEDSGLRWVDC*SPGVQG
Trigger: ACCTTGAACTCCTGGGCTCAAGCAGTCTACCCACCT...CAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp ACCTCCATCTCTGGCAACAGTTTCCATAACAACAGGAATCAGGGATGTGGAGGGGCAGTCCTCCTGGGCTaGACCTCTCTGTACCCACAG +
Preference number: 5 (lower is better)
Translates to: TSISGNSFHNNRNQGCGGAVLLG*TSLYPQ
Trigger: CTGTGGGTACAGAGAGGTCAAGCCCAGGAGGACTGC...CCCTCCACATCCCTGATTCCTGTTGTTATGGAAACTGTTGCCAGAGATGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CAA 90 bp CAGGTCCAGCCAGCCTCCCGGATGGCCAGATATGCAGGAGGGTGGGTTTCCTTCCATTCACTTCTGTCGTaGCTGCTGCTACTTATTTCA +
Preference number: 5 (lower is better)
Translates to: QVQPASRMARYAGGWVSFHSLLS*LLLLIS
Trigger: TGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATG...GAAGGAAACCCACCCTCCTGCATATCTGGCCATCCGGGAGGCTGGCTGGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp CGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTGGAGGCAGGGTGTGTCATCACAGCAGTCTTaGTCACCATTCACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: RFTQLDDRGIYYCWRQGVSSQQS*SPFTSV
Trigger: GACAGAAGTGAATGGTGACAAAGACTGCTGTGATGA...CACACCCTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GTGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGGATGACTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: VFIDHGNQLHIRFTQLDDSFRFP*THSWVS
Trigger: GCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGA...GTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCCACATCATTTGAGGTGTaGAATTTTCCCCTAGAGACT +
Preference number: 5 (lower is better)
Translates to: AGWAWESPKPSAQVQPASTSFEV*NFPLET
Trigger: AGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT...GGAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp TCACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGACCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SLWGGEGQTCGSGLLGLRPSDTD*VSRLVS
Trigger: AGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGG...TCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CAA 90 bp GGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCCCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: GSDMLTRFSIRMFSLLVFPSDTD*VSRLVS
Trigger: AGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGG...GAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CAA 90 bp TGCTTGGACTCCTTAATGACCTGCAGGGGACAGGGAACGTGCACAGTGCAACAGTCCCATCTAGTGGCTTaGGTACCAAGGCTCCCCTTA +
Preference number: 5 (lower is better)
Translates to: CLDSLMTCRGQGTCTVQQSHLVA*VPRLPL
Trigger: TAAGGGGAGCCTTGGTACCAAAGCCACTAGATGGGA...CTGTTGCACTGTGCACGTTCCCTGTCCCCTGCAGGTCATTAAGGAGTCCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CAA 90 bp TCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTACTTCTGCGAGGGCCAGGAGCCCTTaGCAGATGAATACTATGGGC +
Preference number: 5 (lower is better)
Translates to: SACWFSGLSLRTQACTSARARSP*QMNTMG
Trigger: GCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCT...CGCAGAAGTACAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CAA 90 bp AGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCGCATGTTCAGCTTGTaGGTTTTCAGGGCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: SSCAGWAWESPKPSAQVQRMFSL*VFRAQS
Trigger: AGACTGAGCCCTGAAAACCAACAAGCTGAACATGCG...CTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CAA 90 bp ACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATCCATCCGCATGTTCAGCTaGTTGGTTTTCAGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: TSAAPARGTTFTPTMWTSIRMFS*LVFRAQ
Trigger: CTGAGCCCTGAAAACCAACAAGCTGAACATGCGGAT...GGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CAA 90 bp AGACACTTGAGTCATCGCTCAGGAGGTCCTTCTGGGATCTGGGCAGGTGACTGCTCCACTGGGAATAAATaGCCTTGCACTTGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: RHLSHRSGGPSGIWAGDCSTGNK*PCTWRL
Trigger: AAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGGA...GCAGTCACCTGCCCAGATCCCAGAAGGACCTCCTGAGCGATGACTCAAGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp ACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTTCCACTGGGAATAAATaGCCTTGCACTTGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: TCGQRHADPLQHPHVQLVSTGNK*PCTWRL
Trigger: AAGCCGCCAAGTGCAAGGCAATTTATTCCCAGTGGA...AACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS TCA 90 bp CATCTCCACGGTCTTCACCACGATGTTCCTCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAGGCTGGTTTCTCGAATCTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: HLHGLHHDVPLEVAF*HRLGVQAGFSNLQV
Trigger: AACCTGCAGATTCGAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585543.6
ENST00000586125.2
ENST00000588735.3
ENST00000638304.1
ENST00000638618.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR CAA 90 bp CTTCATGCATGTTGCTGGACGCCATTGCCTCATACTGCGTGCGGATCTCTTTCAGTCAGGTCTGCAAACTaGGAGCGGTACCACTCTTCG +
Preference number: 5 (lower is better)
Translates to: LHACCWTPLPHTACGSLSVRSAN*ERYHSS
Trigger: CGAAGAGTGGTACCGCTCCAAGTTTGCAGACCTGAC...TGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS-3UTR CAA 90 bp GTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGACTCCTTAATGACACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: VGPASHHILVLLLGLLNDTTMFL*RWPSDT
Trigger: TGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGT...GTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CAA 90 bp CGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTGGAGGCAGGGTGTGAGCTCTGAAGACCAGTaGTCCTTCAATGTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: RFTQLDDRGIYYCWRQGVSSEDQ*SFNVFV
Trigger: AACAAACACATTGAAGGACAACTGGTCTTCAGAGCT...CACACCCTGCCTCCAGCAATAGTAGATGCCCCGGTCATCCAGCTGGGTGAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GTTCTCAAGGCCGTGCCCGATGTGGTGTCTTGTGGCTCAAGGGCTGTGCCAAGGCATTCACTTCTGTCGTaGCTGCTGCTACTTATTTCA +
Preference number: 5 (lower is better)
Translates to: VLKAVPDVVSCGSRAVPRHSLLS*LLLLIS
Trigger: TGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATG...CCTTGGCACAGCCCTTGAGCCACAAGACACCACATCGGGCACGGCCTTGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
CDS-3UTR CAA 90 bp TCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGACTCGCTCGGCTGTGTCATCACAGCAGTCTTaGTCACCATTCACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: SHGHYPASFSDPETRSAVSSQQS*SPFTSV
Trigger: GACAGAAGTGAATGGTGACAAAGACTGCTGTGATGA...CACAGCCGAGCGAGTCTCAGGATCTGAGAACGAGGCTGGGTAGTGCCCATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: AVELTLIGYLLITAVFVTSFRFP*THSWVS
Trigger: GCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGA...GGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp CCAGAGCATGCAGTGGCCTGGGACAAAGACCGCCAGCACCTCTACCGCACACAGACATCATTTGAGGTGTaGAATTTTCCCCTAGAGACT +
Preference number: 5 (lower is better)
Translates to: PEHAVAWDKDRQHLYRTQTSFEV*NFPLET
Trigger: AGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT...CTGTGTGCGGTAGAGGTGCTGGCGGTCTTTGTCCCAGGCCACTGCATGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
CDS-3UTR CAA 90 bp TGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGCTCAGGTCCAGCCAGCCTCACATCATTTGAGGTGTaGAATTTTCCCCTAGAGACT +
Preference number: 5 (lower is better)
Translates to: CRLGLGKSQAISSGPASLTSFEV*NFPLET
Trigger: AGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT...GAGGCTGGCTGGACCTGAGCTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGTCTCGAATCTGCAGGTaGGAGAAGGTCTGCACGGGA +
Preference number: 5 (lower is better)
Translates to: VPDFPGLTFLDSNHSCLASRICR*EKVCTG
Trigger: TCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGA...CGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTGGGAAGTCGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CAA 90 bp GATCTCCCTGCCCGAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACAGTGTTGAATCATGTTaGAGCTGCTTTGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: DLPARAPRPALLIPVSFDSVESC*SCFAFL
Trigger: CAAGAAAGCAAAGCAGCTCAAACATGATTCAACACT...GTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTCGGGCAGGGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CAA 90 bp CGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCATCCGCATGTTCAGCTaGTTGGTTTTCAGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: RHADPLQHPHVQLVGFQGIRMFS*LVFRAQ
Trigger: CTGAGCCCTGAAAACCAACAAGCTGAACATGCGGAT...GCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
ENST00000640859.1
CDS-3UTR CAA 90 bp CTCCCCCTAGGAGCTCTCTTCAGCTCTGAAGACCAGTTGTCCTTCAATGTGTTTTTTAATGCCCTGGTTTaGCCCTGCCCCTCTGACCCC +
Preference number: 5 (lower is better)
Translates to: LPLGALFSSEDQLSFNVFFNALV*PCPSDP
Trigger: GGGGTCAGAGGGGCAGGGCAAAACCAGGGCATTAAA...AAACACATTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCTCCTAGGGGGAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000638304.1
CDS-3UTR CAA 90 bp CATAAAACTTTATTCACTGCAAGAGCTGCGGTCCTGAGGGAAGAATCCTCTGAAGCGGTGAGGTCTGGCTaGGCCACGTCAAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: HKTLFTARAAVLREESSEAVRSG*ATSSST
Trigger: TGTGGAGCTTGACGTGGCCAAGCCAGACCTCACCGC...TTCAGAGGATTCTTCCCTCAGGACCGCAGCTCTTGCAGTGAATAAAGTTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp AAGTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCCGTCTTTGGTGCTTTaGCCCCCTCGAATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KSPTSQVLLFLIVTTAALPSLVL*PPRICR
Trigger: CCTGCAGATTCGAGGGGGCAAAAGCACCAAAGACGG...CAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTGGGAAGTCGGGGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR CAA 90 bp GAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: EFSPRDSVLVQVGPGKVPTTMFL*RWPSDT
Trigger: TGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGT...TGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp ATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTCTGAGGACTCAGGCCTGTCCTTGTGCTCCTGCTaGGACTCCTTAATGACCTCT +
Preference number: 5 (lower is better)
Translates to: IRMFSLLVFRAQSEDSGLSLCSC*DSLMTS
Trigger: AGAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGA...CAGGCCTGAGTCCTCAGACTGAGCCCTGAAAACCAACAAGCTGAACATGCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp AGGGGCTCAGAGGCTGGGGCGGCCTGGTATGACACAGCAAGGAAGAGGCCTTTAAATACTGGGTACATTTaGTGTGTGAGTAAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: RGSEAGAAWYDTARKRPLNTGYI*CVSKKG
Trigger: TCCCTTCTTACTCACACACAAAATGTACCCAGTATT...TAAAGGCCTCTTCCTTGCTGTGTCATACCAGGCCGCCCCAGCCTCTGAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CAA 90 bp GAGCACCTCGGCCCGCCCTTCTCATTCCGGTTTCCTTTGACCCATTCTTGGGTGAGCTCTGAAGACCAGTaGTCCTTCAATGTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: EHLGPPFSFRFPLTHSWVSSEDQ*SFNVFV
Trigger: AACAAACACATTGAAGGACAACTGGTCTTCAGAGCT...CACCCAAGAATGGGTCAAAGGAAACCGGAATGAGAAGGGCGGGCCGAGGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GGTACGTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTCATTCACTTCTGTCGTaGCTGCTGCTACTTATTTCA +
Preference number: 5 (lower is better)
Translates to: GTCGQRHADPLQHPHVQLHSLLS*LLLLIS
Trigger: TGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATG...AAGCTGAACATGCGGATGCTGAAGCGGGTCAGCATGTCGCTGCCCACACGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CAA 90 bp AGGATGGAAGTAGGGCACATGTGTTTCCTGACTTCACATTTAGGTCAGAGAAGGCCGGGGCATCTACTATaGCTGGAGGCAGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: RMEVGHMCFLTSHLGQRRPGHLL*LEAGCA
Trigger: AGCACACCCTGCCTCCAGCAATAGTAGATGCCCCGG...CCTTCTCTGACCTAAATGTGAAGTCAGGAAACACATGTGCCCTACTTCCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CAA 90 bp CCCTGTGAGAAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCATTAACTATTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PCEKTKTIREGVLAIINYSFRFP*THSWVS
Trigger: GCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGA...ATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTTCTCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CAA 90 bp CCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGCAGTTCTTGTGCAGGTaGGGCCTGGGAAAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: PDRLPAHHSSLCHHSLLSQFLCR*GLGKSQ
Trigger: TTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTG...CGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp TCCCCCAGGTTGATGAAAGACTTTTCCACCAGGCTGGCAGGGCAGGGCCTGGAGACATCATTTGAGGTGTaGAATTTTCCCCTAGAGACT +
Preference number: 5 (lower is better)
Translates to: SPRLMKDFSTRLAGQGLETSFEV*NFPLET
Trigger: AGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT...CTCCAGGCCCTGCCCTGCCAGCCTGGTGGAAAAGTCTTTCATCAACCTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS TCA 90 bp TCCGCTTCCAACTCCTCCTTTATATGGACACAGGCTCAGAATAGGTaGGCTCGCTGCCCACAGTCACAAAGCCCAGCCATGAATGAAACA +
Preference number: 5 (lower is better)
Translates to: SASNSSFIWTQAQNR*ARCPQSQSPAMNET
Trigger: TGTTTCATTCATGGCTGGGCTTTGTGACTGTGGGCAGCGAGCTCACCTATTCTGAGCCTGTGTCCATATAAAGGAGGAGTTGGAAGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS-3UTR CAA 90 bp CCCAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGTTGTTGCTGGACGCCATaGCCTCATACTGCGTGCGGA +
Preference number: 5 (lower is better)
Translates to: PKDSPPLPLTSSASLMYSCCWTP*PHTACG
Trigger: TCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACA...ACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp CCCAGGTGGCAGGACGTCCCCACCCATCTTAGACTGATCAGGGTCAGTCTAGGAAATACTGGGTACATTTaGTGTGTGAGTAAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: PRWQDVPTHLRLIRVSLGNTGYI*CVSKKG
Trigger: TCCCTTCTTACTCACACACAAAATGTACCCAGTATT...TCCTAGACTGACCCTGATCAGTCTAAGATGGGTGGGGACGTCCTGCCACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000588735.3
CDS-3UTR CAA 90 bp CTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATCCAGAAAGCTCTGAAGACCAGTaGTCCTTCAATGTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: LRHPQGGLLLRLRCGHPESSEDQ*SFNVFV
Trigger: AACAAACACATTGAAGGACAACTGGTCTTCAGAGCT...TTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CAA 90 bp TGTTCATTGACCACGGCAACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCAGCTCTGAAGACCAGTaGTCCTTCAATGTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: CSLTTATSSTSASPSWMTSSEDQ*SFNVFV
Trigger: AACAAACACATTGAAGGACAACTGGTCTTCAGAGCT...GGTCATCCAGCTGGGTGAAGCGGATGTGGAGCTGGTTGCCGTGGTCAATGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp CTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACCATTCACTTCTGTCGTaGCTGCTGCTACTTATTTCA +
Preference number: 5 (lower is better)
Translates to: LYFCGTRKGDYFYAYDVDHSLLS*LLLLIS
Trigger: TGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATG...GTCCACATCGTAGGCGTAAAAGTAGTCCCCCTTGCGGGTGCCGCAGAAGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CAA 90 bp CAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTACTTATTTCACTGTTGCCCGATGTGGTGTCTaGTGGCTCAAGGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: QSLSPFTSVVAAATYFTVARCGV*WLKGCA
Trigger: GGCACAGCCCTTGAGCCACAAGACACCACATCGGGC...AACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCATCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: EFSPRDSVLVQVGPGKVPSFRFP*THSWVS
Trigger: GCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGA...TGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp ATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCCAGTTCTTGTGCAGGTaGGGCCTGGGAAAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: IGYLLITAVFVTIHFCRCQFLCR*GLGKSQ
Trigger: TTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTG...GCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGCCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: VLNFPLETQFLCRLGLGKPSDTD*VSRLVS
Trigger: AGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGG...CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639277.1
ENST00000639369.1
CDS-3UTR CAA 90 bp TCACTATGGGGTGGAGAGGGTCAGACGTGTGGCAGTGGCTTACTGGGGTTAAGATTACATTCAGTTTCCTaGCTCTCCTCCAGAATTCCC +
Preference number: 5 (lower is better)
Translates to: SLWGGEGQTCGSGLLGLRLHSVS*LSSRIP
Trigger: GGGAATTCTGGAGGAGAGCAAGGAAACTGAATGTAA...TCTTAACCCCAGTAAGCCACTGCCACACGTCTGACCCTCTCCACCCCATAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CAA 90 bp AGCCCTTTGCAGATGAATACTATGGGCACCTCCATGTCTTCACCACCTTCTGGGCGCATGTTCAGCTTGTaGGTTTTCAGGGCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: SPLQMNTMGTSMSSPPSGRMFSL*VFRAQS
Trigger: AGACTGAGCCCTGAAAACCAACAAGCTGAACATGCG...CCCAGAAGGTGGTGAAGACATGGAGGTGCCCATAGTATTCATCTGCAAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS-3UTR CAA 90 bp GACTACTTTTACGCCTACGATGTGGACATCCAGAACAGTGAGGGAATGGTGGCCATCCGCATGTTCAGCTaGTTGGTTTTCAGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: DYFYAYDVDIQNSEGMVAIRMFS*LVFRAQ
Trigger: CTGAGCCCTGAAAACCAACAAGCTGAACATGCGGAT...GGCCACCATTCCCTCACTGTTCTGGATGTCCACATCGTAGGCGTAAAAGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640545.1
CDS TCA 90 bp TTTTATTATGACCACCGCTTCACAGCTGTGCAAGTCAAAGTAACTTaGTGGGGGTCACAAGCTGGTGGCAGGCAGTCACCTGTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: FYYDHRFTAVQVKVT*WGSQAGGRQSPVLC
Trigger: GCAAAGCACAGGTGACTGCCTGCCACCAGCTTGTGACCCCCATCAAGTTACTTTGACTTGCACAGCTGTGAAGCGGTGGTCATAATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS CCA 90 bp GCATATGGTAGAGGCTCAGTAACCCAAAACAGACTGGCAGAGGCATaGAATGCAGGCTCCCAAGTGAGATGTGCTAGAGTTGGAAATCCA +
Preference number: 5 (lower is better)
Translates to: AYGRGSVTQNRLAEA*NAGSQVRCARVGNP
Trigger: TGGATTTCCAACTCTAGCACATCTCACTTGGGAGCCTGCATTCCATGCCTCTGCCAGTCTGTTTTGGGTTACTGAGCCTCTACCATATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588640.5
CDS-3UTR CAA 90 bp GATACTCCGAGAGAACCTCCATCTCTGGCAACAGTTTCCATAACAACAGGAATCTCGGCTTCATGCATGTaGCTGGACGCCATTGCCTCA +
Preference number: 5 (lower is better)
Translates to: DTPREPPSLATVSITTGISASCM*LDAIAS
Trigger: TGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGA...GATTCCTGTTGTTATGGAAACTGTTGCCAGAGATGGAGGTTCTCTCGGAGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp AAGTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: KSPTSQVLLFLIVTTAALTTMFL*RWPSDT
Trigger: TGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGT...CAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTGGGAAGTCGGGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CAA 90 bp CCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGTCCCAAGCCATCAGAGCTCTGAAGACCAGTaGTCCTTCAATGTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: PRDSVLVQVGPGKVPSHQSSEDQ*SFNVFV
Trigger: AACAAACACATTGAAGGACAACTGGTCTTCAGAGCT...CTGATGGCTTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp CCACTTTCCAGGACAAGGGCCAGGAGCCCTTTGCAGATGAATACTATGGGCACCCATTCACTTCTGTCGTaGCTGCTGCTACTTATTTCA +
Preference number: 5 (lower is better)
Translates to: PLSRTRARSPLQMNTMGTHSLLS*LLLLIS
Trigger: TGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATG...GGTGCCCATAGTATTCATCTGCAAAGGGCTCCTGGCCCTTGTCCTGGAAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
CDS-3UTR CAA 90 bp GTGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTTGGACTCCTTAATGACTTACATTCAGTTTCCTaGCTCTCCTCCAGAATTCCC +
Preference number: 5 (lower is better)
Translates to: VGPASHHILVLLLGLLNDLHSVS*LSSRIP
Trigger: GGGAATTCTGGAGGAGAGCAAGGAAACTGAATGTAA...GTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CAA 90 bp ACTGTGCTCCTGTGGGCATGGGGGCTCCAGGCCTTTGAAATTGTGGAGAAGGAAAGAAATGAGTTGGTCTaGTCAAAGGCTACATCTTGG +
Preference number: 5 (lower is better)
Translates to: TVLLWAWGLQAFEIVEKERNELV*SKATSW
Trigger: CCAAGATGTAGCCTTTGACAAGACCAACTCATTTCT...TTCCTTCTCCACAATTTCAAAGGCCTGGAGCCCCCATGCCCACAGGAGCACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp ACAGATCAGAGTCCACTCTGGGGAAGGGCGCAGCATTTGTCTTTATTTTTCCTCATTGTGCTGGTTGAGTaGCAGGTAGCAGGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: TDQSPLWGRAQHLSLFFLIVLVE*QVAGRG
Trigger: TCCTCTCCCTGCTACCTGCAACTCAACCAGCACAAT...GAGGAAAAATAAAGACAAATGCTGCGCCCTTCCCCAGAGTGGACTCTGATCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp AATGTTAGAAGGGCATCTTGTACATCCACTGGGAATAAATTGCCTTGCACTTGGGGTGGGTACCCTGGGTaGGGACAGGTGGTAGGAACA +
Preference number: 5 (lower is better)
Translates to: NVRRASCTSTGNKLPCTWGGYPG*GQVVGT
Trigger: TGTTCCTACCACCTGTCCCAACCCAGGGTACCCACC...CCAAGTGCAAGGCAATTTATTCCCAGTGGATGTACAAGATGCCCTTCTAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp GCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTCGCATGTTCAGCTTGTaGGTTTTCAGGGCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: ATCSSQQSLSPFTSVVAARMFSL*VFRAQS
Trigger: AGACTGAGCCCTGAAAACCAACAAGCTGAACATGCG...AGCAGCAACGACAGAAGTGAATGGTGACAAAGACTGCTGTGATGAGCAGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS TCA 90 bp TCCAGGCTGGTTTCGCGAGCCGGCGGCGTTCCATTTACAATCTGGTaGGCCTGTATTGGTATAACTCGTATTGTGAGGCTTTTGAGATAT +
Preference number: 5 (lower is better)
Translates to: SRLVSRAGGVPFTIW*ACIGITRIVRLLRY
Trigger: ATATCTCAAAAGCCTCACAATACGAGTTATACCAATACAGGCTCACCAGATTGTAAATGGAACGCCGCCGGCTCGCGAAACCAGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253408.11
CDS-3UTR CAA 90 bp ACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGAGGTCCTGTGCCAGATaGTCCCTCTCAACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TSFEVLNFPLETQFLCRLRSCAR*SLSTSS
Trigger: GCTGGAGGTTGAGAGGGACAATCTGGCACAGGACCT...CAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp CTTAGAACAGCCTATGGAGGGACTGAGGAAACGGAATTACATTCAGTTTCCTTGCCTCACATCACATCCTaGTGCTCCTGCTTGGACTCC +
Preference number: 5 (lower is better)
Translates to: LRTAYGGTEETELHSVSLPHITS*CSCLDS
Trigger: GGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGG...CAAGGAAACTGAATGTAATTCCGTTTCCTCAGTCCCTCCATAGGCTGTTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591880.2
CDS-3UTR CAA 90 bp GCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCACATCATTTGAGGTGTaGAATTTTCCCCTAGAGACT +
Preference number: 5 (lower is better)
Translates to: AVELTLIGYLLITAVFVTTSFEV*NFPLET
Trigger: AGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT...GGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp AAGTGCAACTGGTCACCCACAACCCCTACTTGTATGCCTAGCGCCATCCCAATTCAGGTCTTACTTTTCTaGATAGTAACCACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: KCNWSPTTPTCMPSAIPIQVLLF*IVTTAA
Trigger: GGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTG...AATTGGGATGGCGCTAGGCATACAAGTAGGGGTTGTGGGTGACCAGTTGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586125.2
CDS-3UTR CAA 90 bp GTCCCCGACTTCCCAGGTCTTACTTTTCTTGATAGTAACCACAGCTGCCTTGCGCAGGTCTTACTTTTCTaGATAGTAACCACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: VPDFPGLTFLDSNHSCLAQVLLF*IVTTAA
Trigger: GGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTG...CGCAAGGCAGCTGTGGTTACTATCAAGAAAAGTAAGACCTGGGAAGTCGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586125.2
ENST00000591880.2
CDS-3UTR CAA 90 bp CAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGTTAGCTTCCAGCCTCAGGTaGGTTTCATCCTGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: QGLTTFTTNKLCQFNVQLASSLR*VSSWSF
Trigger: GAAGCTCCAGGATGAAACCAACCTGAGGCTGGAAGC...TAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638281.1
CDS-3UTR CAA 90 bp ACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTCGGCTTCATGCATGTaGCTGGACGCCATTGCCTCA +
Preference number: 5 (lower is better)
Translates to: TTSFEVLNFPLETQFLCRSASCM*LDAIAS
Trigger: TGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGA...CCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639277.1
CDS-3UTR CAA 90 bp GTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTAGCTCTGAAGACCAGTaGTCCTTCAATGTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: VELTLIGYLLITAVFVTISSEDQ*SFNVFV
Trigger: AACAAACACATTGAAGGACAACTGGTCTTCAGAGCT...AATGGTGACAAAGACTGCTGTGATGAGCAGGTAGCCTATCAGGGTGAGCTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp AAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCATTAACTATGTGTCCAAATCATCACAGCAGTCTTaGTCACCATTCACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: KTKTIREGVLAIINYVSKSSQQS*SPFTSV
Trigger: GACAGAAGTGAATGGTGACAAAGACTGCTGTGATGA...TTTGGACACATAGTTAATGATGGCCAGCACGCCCTCCCGGATGGTCTTTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
CDS-3UTR CAA 90 bp GGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAATCATCACAGCAGTCTTaGTCACCATTCACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: GVEFSPRDSVLVQVGPGKSSQQS*SPFTSV
Trigger: GACAGAAGTGAATGGTGACAAAGACTGCTGTGATGA...TTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp CAGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTACTTATTTCACTGTTCAGTTCTTGTGCAGGTaGGGCCTGGGAAAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: QSLSPFTSVVAAATYFTVQFLCR*GLGKSQ
Trigger: TTGGGACTTTCCCAGGCCCAACCTGCACAAGAACTG...AACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp ATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGACATCATTTGAGGTGTaGAATTTTCCCCTAGAGACT +
Preference number: 5 (lower is better)
Translates to: MLTRFSIRMFSLLVFRAQTSFEV*NFPLET
Trigger: AGTCTCTAGGGGAAAATTCAACACCTCAAATGATGT...CTGAGCCCTGAAAACCAACAAGCTGAACATGCGGATGCTGAAGCGGGTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CAA 90 bp ACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTCTCGAATCTGCAGGTaGGAGAAGGTCTGCACGGGA +
Preference number: 5 (lower is better)
Translates to: TTSFEVLNFPLETQFLCRSRICR*EKVCTG
Trigger: TCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGA...CCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639277.1
CDS-3UTR CAA 90 bp CAAGGACTCACCACCTTTACCACTAACAAGCTCTGCCAGTTTAATGTACAGTTATCAGAAGGGCAGTGCTaGCTCAGGGATCTGCAGACA +
Preference number: 5 (lower is better)
Translates to: QGLTTFTTNKLCQFNVQLSEGQC*LRDLQT
Trigger: TGTCTGCAGATCCCTGAGCAAGCACTGCCCTTCTGA...TAACTGTACATTAAACTGGCAGAGCTTGTTAGTGGTAAAGGTGGTGAGTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638281.1
ENST00000639921.1
CDS CCA 90 bp TTCGCGAGCCGGCGGCGTTCCATTTACAATCTGGTGAGCCTGTATTaGTATAACTCGTATTGTGAGGCTTTTGAGATATCTTGTGACCTT +
Preference number: 5 (lower is better)
Translates to: FASRRRSIYNLVSLY*YNSYCEAFEISCDL
Trigger: AAGGTCACAAGATATCTCAAAAGCCTCACAATACGAGTTATACCAATACAGGCTCACCAGATTGTAAATGGAACGCCGCCGGCTCGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253408.11
CDS-3UTR CAA 90 bp AGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTACTTATTTCACTGTTGACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: SLCHHSLLSLLLLLISLLTTMFL*RWPSDT
Trigger: TGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGT...CAACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTGCAGGTTGGGCCTGGGAAAGCATTCACTTCTGTCGTaGCTGCTGCTACTTATTTCA +
Preference number: 5 (lower is better)
Translates to: VLNFPLETQFLCRLGLGKHSLLS*LLLLIS
Trigger: TGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATG...CTTTCCCAGGCCCAACCTGCACAAGAACTGAGTCTCTAGGGGAAAATTCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp CTCCCCCTAGGAGCTCTCTTCAGCTCTGAAGACCAGTTGTCCTTCAATGTGTTTAGTGTTGAATCATGTTaGAGCTGCTTTGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LPLGALFSSEDQLSFNVFSVESC*SCFAFL
Trigger: CAAGAAAGCAAAGCAGCTCAAACATGATTCAACACT...AAACACATTGAAGGACAACTGGTCTTCAGAGCTGAAGAGAGCTCCTAGGGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CAA 90 bp AGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTACTTATTTCACTGTTGCGCATGTTCAGCTTGTaGGTTTTCAGGGCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: SLCHHSLLSLLLLLISLLRMFSL*VFRAQS
Trigger: AGACTGAGCCCTGAAAACCAACAAGCTGAACATGCG...CAACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000639243.1
ENST00000640859.1
CDS-3UTR CAA 90 bp TTTCCTGACTTCACATTTAGGTCAGAGAAGGAAAGTGTGAACTCAGATTTATCCCCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: FPDFTFRSEKESVNSDLSPSDTD*VSRLVS
Trigger: AGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGG...GGATAAATCTGAGTTCACACTTTCCTTCTCTGACCTAAATGTGAAGTCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CAA 90 bp AGTCTTTGTCACCATTCACTTCTGTCGTTGCTGCTGCTACTTATTTCACTGTTGTCATCACAGCAGTCTTaGTCACCATTCACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: SLCHHSLLSLLLLLISLLSSQQS*SPFTSV
Trigger: GACAGAAGTGAATGGTGACAAAGACTGCTGTGATGA...CAACAGTGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATGGTGACAAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639042.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS GCA 90 bp GTCAGCCTGGTTAGCCTTTCTGATGCTGAATTAAGTCCTGAGACATaGATATCTAGTGGTCCTAAATATTCTAGTCCAGAAGAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: VSLVSLSDAELSPET*ISSGPKYSSPEEEE
Trigger: TTCCTCTTCTTCTGGACTAGAATATTTAGGACCACTAGATATGCATGTCTCAGGACTTAATTCAGCATCAGAAAGGCTAACCAGGCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589701.2
ENST00000640552.1
CDS-3UTR CAA 90 bp TCAAATACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGTCATTCCGGTTTCCTTaGACCCATTCTTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: SNTTSFEVLNFPLETQFLSFRFP*THSWVS
Trigger: GCTCACCCAAGAATGGGTCAAAGGAAACCGGAATGA...CAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGTATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639277.1
ENST00000639369.1
ENST00000640859.1
CDS-3UTR CAA 90 bp GCTCTTAACAAGAATGTTTATAGCCCCAAACCAATGAATGGACATGTAATCAACGGAAGGGCGCAGCATTaGTCTTTATTTTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: ALNKNVYSPKPMNGHVINGRAQH*SLFFLS
Trigger: GCTGAGGAAAAATAAAGACAAATGCTGCGCCCTTCC...GTTGATTACATGTCCATTCATTGGTTTGGGGCTATAAACATTCTTGTTAAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588735.3
CDS-3UTR CAA 90 bp TCAGCTCTGAAGACCAGTTGTCCTTCAATGTGTTTGTTAAATGATACCAGATGTAGCTGCTTTGCTTTCTaGCCTATGAAGATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: SALKTSCPSMCLLNDTRCSCFAF*PMKIVL
Trigger: CAGCACAATCTTCATAGGCAAGAAAGCAAAGCAGCT...ACATCTGGTATCATTTAACAAACACATTGAAGGACAACTGGTCTTCAGAGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588735.3
ENST00000639042.1
CDS-3UTR CAA 90 bp TCAAATACTACATCATTTGAGGTGTTGAATTTTCCCCTAGAGACTCAGTTCTTGCATTCACTTCTGTCGTaGCTGCTGCTACTTATTTCA +
Preference number: 5 (lower is better)
Translates to: SNTTSFEVLNFPLETQFLHSLLS*LLLLIS
Trigger: TGAAATAAGTAGCAGCAGCAACGACAGAAGTGAATG...CAAGAACTGAGTCTCTAGGGGAAAATTCAACACCTCAAATGATGTAGTATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000588735.3
ENST00000638304.1
ENST00000638400.1
ENST00000639243.1
ENST00000639369.1
ENST00000640859.1
CDS TCA 72 bp CTCTCAACCTCCAGCCGGGCGCTGTTGGCGGTGAGTTaGTCGAGCCGCAGCCGCAGCTCTCGCAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: LSTSSRALLAVS*SSRSRSSRSSA
Trigger: GGCTGAGCTGCGAGAGCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGCGCCCGGCTGGAGGTTGAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000585728.5
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000638618.1
ENST00000639277.1
ENST00000640552.1
CDS CAA 72 bp CCTCTCAACCTCCAGCCGGGCGCTGTTGGCGGTGAGTaGATCGAGCCGCAGCCGCAGCTCTCGCAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PLNLQPGAVGGE*IEPQPQLSQLS
Trigger: GCTGAGCTGCGAGAGCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGCGCCCGGCTGGAGGTTGAGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000585728.5
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000638618.1
ENST00000639277.1
ENST00000640552.1
CDS TCA 72 bp TGTCCCTCTCAACCTCCAGCCGGGCGCTGTTGGCGGTaGGTTGATCGAGCCGCAGCCGCAGCTCTCGCAGCT +
Preference number: 6 (lower is better)
Translates to: CPSQPPAGRCWR*VDRAAAAALAA
Trigger: AGCTGCGAGAGCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGCGCCCGGCTGGAGGTTGAGAGGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000585728.5
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000638618.1
ENST00000639277.1
ENST00000640552.1
CDS TCA 72 bp GGGAGGCCCAGGGAGCAGGGAGGTTCGGCCCCTCCCTaGGACTTCTCGGGCACTCCTTCTTGGGGATTCAGC +
Preference number: 6 (lower is better)
Translates to: GRPREQGGSAPP*DFSGTPSWGFS
Trigger: GCTGAATCCCCAAGAAGGAGTGCCCGAGAAGTCTCAGGGAGGGGCCGAACCTCCCTGCTCCCTGGGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS CCA 72 bp GGCAGAAGGCATGCGGGCATCAGATCCCCGGGGCCCTaGGCCTGTTTCTGGTCCCTCCCATCATGTTGGGGG +
Preference number: 6 (lower is better)
Translates to: GRRHAGIRSPGP*ACFWSLPSCWG
Trigger: CCCCCAACATGATGGGAGGGACCAGAAACAGGCCCAGGGCCCCGGGGATCTGATGCCCGCATGCCTTCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS GCA 72 bp CTCACTGGCCCGGGTCTCCTTGAAGCCAGCATTGAGTaGCCCAGCCAGGGAGAAATCCACCCGGGTCGGGAG +
Preference number: 6 (lower is better)
Translates to: LTGPGLLEASIE*PSQGEIHPGRE
Trigger: CTCCCGACCCGGGTGGATTTCTCCCTGGCTGGGGCACTCAATGCTGGCTTCAAGGAGACCCGGGCCAGTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000639277.1
ENST00000640552.1
CDS GCA 72 bp CTCACCCTGGGTTCTAATAGCCCTTTCTCCCCTGCCTaGAGGGAGGTCCTCCCAGCCCCATCGGGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: LTLGSNSPFSPA*REVLPAPSGPH
Trigger: GTGAGGGCCCGATGGGGCTGGGAGGACCTCCCTGCAGGCAGGGGAGAAAGGGCTATTAGAACCCAGGGTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591719.5
CDS CCA 72 bp GCTCTCGCAGCTCAGCCTGGTAGACGTCTGCCAGCTTaGTGGGCTCCTTGGCCCGCAGCTGGTTCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: ALAAQPGRRLPA*WAPWPAAGSAQ
Trigger: CTGAGCTGAACCAGCTGCGGGCCAAGGAGCCCACCAAGCTGGCAGACGTCTACCAGGCTGAGCTGCGAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000639277.1
ENST00000640552.1
CDS CAA 90 bp CAGATTGTCCCTCTCAACCTCCAGCCGGGCGCTGTTGGCGGTGAGTaGATCGAGCCGCAGCCGCAGCTCTCGCAGCTCAGCCTGGTAGAC +
Preference number: 6 (lower is better)
Translates to: QIVPLNLQPGAVGGE*IEPQPQLSQLSLVD
Trigger: GTCTACCAGGCTGAGCTGCGAGAGCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGCGCCCGGCTGGAGGTTGAGAGGGACAATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000639277.1
ENST00000640552.1
CDS CAA 72 bp TTGGCTTCGTGCTTGGCCTGGCGGAGCAGCTCCGCGTaGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTTC +
Preference number: 6 (lower is better)
Translates to: LASCLAWRSSSA*RAAASVRSANF
Trigger: GAAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588640.5
CDS CAA 72 bp TTGGCTTCGTGCTTGGCCTGGCGGAGCAGCTCCGCGTaGCGGGCAGCAGCGTCTGTCAGGTCTGCAAACTCA +
Preference number: 6 (lower is better)
Translates to: LASCLAWRSSSA*RAAASVRSANS
Trigger: TGAGTTTGCAGACCTGACAGACGCTGCTGCCCGCAACGCGGAGCTGCTCCGCCAGGCCAAGCACGAAGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591719.5
CDS CAA 90 bp ATCATCTCTGCCCGCTCACTGGCCCGGGTCTCCTTGAAGCCAGCATaGAGTGCCCCAGCCAGGGAGAAATCCACCCGGGTCGGGAGTGGA +
Preference number: 6 (lower is better)
Translates to: IISARSLARVSLKPA*SAPAREKSTRVGSG
Trigger: TCCACTCCCGACCCGGGTGGATTTCTCCCTGGCTGGGGCACTCAATGCTGGCTTCAAGGAGACCCGGGCCAGTGAGCGGGCAGAGATGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000639277.1
ENST00000640552.1
CDS TCA 72 bp GGTGAGCTCGCTGCCCACAGTCACAAAGCCCAGCCATaGATGAAACACAGGGGCCCCGCTGCTCCTGCACTG +
Preference number: 6 (lower is better)
Translates to: GELAAHSHKAQP*MKHRGPAAPAL
Trigger: CAGTGCAGGAGCAGCGGGGCCCCTGTGTTTCATTCATGGCTGGGCTTTGTGACTGTGGGCAGCGAGCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS TCA 72 bp AAGGAAGCTGCGGACCAAGGCCAGGGACCACACGCCTaGGGTGCTGGTTCGGAGCTGCTTAGTACCCTCTCC +
Preference number: 6 (lower is better)
Translates to: KEAADQGQGPHA*GAGSELLSTLS
Trigger: GGAGAGGGTACTAAGCAGCTCCGAACCAGCACCTCAGGCGTGTGGTCCCTGGCCTTGGTCCGCAGCTTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639277.1
ENST00000640545.1
CDS GCA 72 bp GATGGGGGTCACAAGCTGGTGGCAGGCAGTCACCTGTaGTTTGCGCCCAGACCTGCCTGCTCTTTCCCTCAC +
Preference number: 6 (lower is better)
Translates to: DGGHKLVAGSHL*FAPRPACSFPH
Trigger: GTGAGGGAAAGAGCAGGCAGGTCTGGGCGCAAAGCACAGGTGACTGCCTGCCACCAGCTTGTGACCCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS CCA 72 bp GGGCCCTGGGCCTGTTTCTGGTCCCTCCCATCATGTTaGGGGGCAAGGATAGTGCCCCATCAAGAGGTAGGG +
Preference number: 6 (lower is better)
Translates to: GPWACFWSLPSC*GARIVPHQEVG
Trigger: CCCTACCTCTTGATGGGGCACTATCCTTGCCCCCCAACATGATGGGAGGGACCAGAAACAGGCCCAGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS CAA 72 bp CTGATCCCCTTTCCTGGGCACAGGCTGAATAGAGCCTaGTTCTCCACCGCCGGTGGCGCCACACAGCAAGGG +
Preference number: 6 (lower is better)
Translates to: LIPFPGHRLNRA*FSTAGGATQQG
Trigger: CCCTTGCTGTGTGGCGCCACCGGCGGTGGAGAACAAGGCTCTATTCAGCCTGTGCCCAGGAAAGGGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593179.1
CDS CAA 90 bp TCATTGAGCTCCATCATCTCTGCCCGCTCACTGGCCCGGGTCTCCTaGAAGCCAGCATTGAGTGCCCCAGCCAGGGAGAAATCCACCCGG +
Preference number: 6 (lower is better)
Translates to: SLSSIISARSLARVS*KPALSAPAREKSTR
Trigger: CCGGGTGGATTTCTCCCTGGCTGGGGCACTCAATGCTGGCTTCAAGGAGACCCGGGCCAGTGAGCGGGCAGAGATGATGGAGCTCAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000639277.1
ENST00000640552.1
CDS GCA 72 bp CATCTGCTTCTTCTGCCTCACAGTGGCCAGGTCCTGTaGCAGATTGTCCCTCTCAACCTCCAGCCGGGCGCT +
Preference number: 6 (lower is better)
Translates to: HLLLLPHSGQVL*QIVPLNLQPGA
Trigger: AGCGCCCGGCTGGAGGTTGAGAGGGACAATCTGGCACAGGACCTGGCCACTGTGAGGCAGAAGAAGCAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376990.8
CDS GCA 72 bp ACGTCAAGCTCCACATGGACCTGCTGTCGGGCCAGCTaGTCCTGGAGTTCCCGAACCTCCTGCCAATCTCTG +
Preference number: 6 (lower is better)
Translates to: TSSSTWTCCRAS*SWSSRTSCQSL
Trigger: CAGAGATTGGCAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCAGGTCCATGTGGAGCTTGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587997.6
CDS CAA 72 bp TCCATCATCTCTGCCCGCTCACTGGCCCGGGTCTCCTaGAAGCCAGCATTGAGTGCCCCAGCCAGGGAGAAA +
Preference number: 6 (lower is better)
Translates to: SIISARSLARVS*KPALSAPAREK
Trigger: TTTCTCCCTGGCTGGGGCACTCAATGCTGGCTTCAAGGAGACCCGGGCCAGTGAGCGGGCAGAGATGATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000253408.11
ENST00000376990.8
ENST00000435360.8
ENST00000586793.6
ENST00000588037.1
ENST00000588316.1
ENST00000588735.3
ENST00000591327.2
ENST00000592320.6
ENST00000638281.1
ENST00000639277.1
ENST00000640552.1
CDS CAA 72 bp GGGGTCACAAGCTGGTGGCAGGCAGTCACCTGTGCTTaGCGCCCAGACCTGCCTGCTCTTTCCCTCACTTTC +
Preference number: 6 (lower is better)
Translates to: GVTSWWQAVTCA*RPDLPALSLTF
Trigger: GAAAGTGAGGGAAAGAGCAGGCAGGTCTGGGCGCAAAGCACAGGTGACTGCCTGCCACCAGCTTGTGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS CCA 72 bp AGCTCCACATGGACCTGCTGTCGGGCCAGCTGCTCCTaGAGTTCCCGAACCTCCTGCCAATCTCTGTTTCTC +
Preference number: 6 (lower is better)
Translates to: SSTWTCCRASCS*SSRTSCQSLFL
Trigger: GAGAAACAGAGATTGGCAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCAGGTCCATGTGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587997.6
CDS CAA 72 bp ACGATGTTCCTCTTGAGGTGGCCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTCGCGAGCCGGCGGCGTT +
Preference number: 6 (lower is better)
Translates to: TMFLLRWPSDTD*VSRLVSRAGGV
Trigger: AACGCCGCCGGCTCGCGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253408.11
CDS CAA 90 bp AACTTGATGGGGGTCACAAGCTGGTGGCAGGCAGTCACCTGTGCTTaGCGCCCAGACCTGCCTGCTCTTTCCCTCACTTTCTTCACCCCA +
Preference number: 6 (lower is better)
Translates to: NLMGVTSWWQAVTCA*RPDLPALSLTFFTP
Trigger: TGGGGTGAAGAAAGTGAGGGAAAGAGCAGGCAGGTCTGGGCGCAAAGCACAGGTGACTGCCTGCCACCAGCTTGTGACCCCCATCAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS TCA 72 bp CCTGGCACCTGGCTTTCTGAAAACCCAGCACGGTATTaGAATCAGGAGACCAGGAGGGGTGCGGTGGCTCAC +
Preference number: 6 (lower is better)
Translates to: PGTWLSENPARY*NQETRRGAVAH
Trigger: GTGAGCCACCGCACCCCTCCTGGTCTCCTGATTTCAATACCGTGCTGGGTTTTCAGAAAGCCAGGTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000589701.2
ENST00000592065.2
ENST00000640552.1
CDS GCA 72 bp GCTCTGTCTTCTGGCCTGGCTTCATTTCAGCCCCTCTaGAAGCCCTGGCCTGGCACCTGGCTTTCTGAAAAC +
Preference number: 6 (lower is better)
Translates to: ALSSGLASFQPL*KPWPGTWLSEN
Trigger: GTTTTCAGAAAGCCAGGTGCCAGGCCAGGGCTTGCAGAGGGGCTGAAATGAAGCCAGGCCAGAAGACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000589701.2
ENST00000592065.2
ENST00000640552.1
CDS CAA 72 bp GCTGCAGTGAGCTGTGTTTGCGCCACTCCAGCCCATTaGTGTCCTTGGACTTCTGGGAAGCAGACAGCCCTC +
Preference number: 6 (lower is better)
Translates to: AAVSCVCATPAH*CPWTSGKQTAL
Trigger: GAGGGCTGTCTGCTTCCCAGAAGTCCAAGGACACAAATGGGCTGGAGTGGCGCAAACACAGCTCACTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593179.1
CDS CAA 90 bp ACCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCG +
Preference number: 6 (lower is better)
Translates to: TSPSRISTVFTTMFL*RWPSDTDLVSRLVS
Trigger: CGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253408.11
CDS CAA 90 bp CCCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTTC +
Preference number: 6 (lower is better)
Translates to: PSPSRISTVFTTMFL*RWPSDTDLVSRLVF
Trigger: GAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441312.2
ENST00000638488.1
CDS CAA 90 bp GTCTTCACCACGATGTTCCTCTTGAGGTGGCCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTCTGCAGATGTGGGGAGAGGAGGCCTC +
Preference number: 6 (lower is better)
Translates to: VFTTMFLLRWPSDTD*VSRLVSADVGRGGL
Trigger: GAGGCCTCCTCTCCCCACATCTGCAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589701.2
ENST00000592065.2
ENST00000638921.1
CDS CAA 90 bp CCCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCT +
Preference number: 6 (lower is better)
Translates to: PSPSRISTVFTTMFL*RWPSDTDLVSRLVS
Trigger: AGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000592065.2
ENST00000638304.1
ENST00000638400.1
ENST00000639277.1
ENST00000639369.1
CDS CAA 90 bp GGCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCT +
Preference number: 6 (lower is better)
Translates to: GSPSRISTVFTTMFL*RWPSDTDLVSRLVS
Trigger: AGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639042.1
CDS CAA 90 bp GCCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCT +
Preference number: 6 (lower is better)
Translates to: ASPSRISTVFTTMFL*RWPSDTDLVSRLVS
Trigger: AGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638618.1
CDS TCA 72 bp GGTCTTCACCACGATGTTCCTCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAGGCTGGTTTCGCGAGC +
Preference number: 6 (lower is better)
Translates to: GLHHDVPLEVAF*HRLGVQAGFAS
Trigger: GCTCGCGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253408.11
CDS TCA 72 bp CACTTGAAGGCACACATGCATGTCCTGTCAGCTCAGTaGAGCGCCATGCCCCTGGGGATTCCTCTGATCCCA +
Preference number: 6 (lower is better)
Translates to: HLKAHMHVLSAQ*SAMPLGIPLIP
Trigger: TGGGATCAGAGGAATCCCCAGGGGCATGGCGCTTCACTGAGCTGACAGGACATGCATGTGTGCCTTCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS GCA 72 bp GCCACCAGGTGGGTCCTGCCTCACATCACATCCTTGTaGTCCTGCTTGGACTCCTTAATGACCTCTCCATCC +
Preference number: 6 (lower is better)
Translates to: ATRWVLPHITSL*SCLDSLMTSPS
Trigger: GGATGGAGAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253408.11
ENST00000585543.6
ENST00000588735.3
ENST00000589701.2
ENST00000592706.5
CDS CCA 72 bp GAGTTCCAAACGTCTGCAAGGGGCTTGAGTGTTATCTaGGAGGGGCGCATGTCTATCGGTTCTCCTCGCCCT +
Preference number: 6 (lower is better)
Translates to: EFQTSARGLSVI*EGRMSIGSPRP
Trigger: AGGGCGAGGAGAACCGATAGACATGCGCCCCTCCCAGATAACACTCAAGCCCCTTGCAGACGTTTGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS CAA 72 bp CCGTCTTTGGTGCTTTTGCCCCCTCGAATCTGCAGGTaGGAGAAGGTCTGCACGGGAATGGTGATCCGGTTC +
Preference number: 6 (lower is better)
Translates to: PSLVLLPPRICR*EKVCTGMVIRF
Trigger: GAACCGGATCACCATTCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGGGGGCAAAAGCACCAAAGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253408.11
ENST00000435360.8
ENST00000591880.2
ENST00000639042.1
CDS CAA 72 bp GAGGCCACCAGGTGGGTCCTGCCTCACATCACATCCTaGTGCTCCTGCTTGGACTCCTTAATGACCTCTCCA +
Preference number: 6 (lower is better)
Translates to: EATRWVLPHITS*CSCLDSLMTSP
Trigger: TGGAGAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCACCTGGTGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253408.11
ENST00000585543.6
ENST00000588735.3
ENST00000589701.2
ENST00000592706.5
CDS CAA 90 bp ACCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTCT +
Preference number: 6 (lower is better)
Translates to: TSPSRISTVFTTMFL*RWPSDTDLVSRLVS
Trigger: AGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000585543.6
ENST00000586125.2
ENST00000588735.3
ENST00000589701.2
ENST00000638921.1
CDS CAA 90 bp ACCTCTCCATCCCGCATCTCCACGGTCTTCACCACGATGTTCCTCTaGAGGTGGCCTTCTGACACAGACTTGGTGTCCAGGCTGGTTTTG +
Preference number: 6 (lower is better)
Translates to: TSPSRISTVFTTMFL*RWPSDTDLVSRLVL
Trigger: CAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592706.5
CDS TCA 72 bp GACCACCGCTTCACAGCTGTGCAAGTCAAAGTAACTTaGTGGGGGTCACAAGCTGGTGGCAGGCAGTCACCT +
Preference number: 6 (lower is better)
Translates to: DHRFTAVQVKVT*WGSQAGGRQSP
Trigger: AGGTGACTGCCTGCCACCAGCTTGTGACCCCCATCAAGTTACTTTGACTTGCACAGCTGTGAAGCGGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS CCA 72 bp TGTGCAAGTCAAAGTAACTTGATGGGGGTCACAAGCTaGTGGCAGGCAGTCACCTGTGCTTTGCGCCCAGAC +
Preference number: 6 (lower is better)
Translates to: CASQSNLMGVTS*WQAVTCALRPD
Trigger: GTCTGGGCGCAAAGCACAGGTGACTGCCTGCCACCAGCTTGTGACCCCCATCAAGTTACTTTGACTTGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS CAA 72 bp TGGGTCCTGCCTCACATCACATCCTTGTGCTCCTGCTaGGACTCCTTAATGACCTCTCCATCCCGCATCTCC +
Preference number: 6 (lower is better)
Translates to: WVLPHITSLCSC*DSLMTSPSRIS
Trigger: GGAGATGCGGGATGGAGAGGTCATTAAGGAGTCCAAGCAGGAGCACAAGGATGTGATGTGAGGCAGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253408.11
ENST00000585543.6
ENST00000588735.3
ENST00000589701.2
ENST00000592706.5
CDS CAA 72 bp ACGATGTTCCTCTTGAGGTGGCCTTCTGACACAGACTaGGTGTCCAGGCTGGTTTTGCAAGAGCTGCGGTCC +
Preference number: 6 (lower is better)
Translates to: TMFLLRWPSDTD*VSRLVLQELRS
Trigger: GGACCGCAGCTCTTGCAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592706.5
CDS TCA 72 bp GGTCTTCACCACGATGTTCCTCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAGGCTGGTTTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: GLHHDVPLEVAF*HRLGVQAGFCR
Trigger: TCTGCAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589701.2
ENST00000592065.2
ENST00000638921.1
CDS TCA 72 bp CGTGCTATCTGGAGTTCCAAACGTCTGCAAGGGGCTTaGGTGTTATCTGGGAGGGGCGCATGTCTATCGGTT +
Preference number: 6 (lower is better)
Translates to: RAIWSSKRLQGA*VLSGRGACLSV
Trigger: AACCGATAGACATGCGCCCCTCCCAGATAACACTCAAGCCCCTTGCAGACGTTTGGAACTCCAGATAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639921.1
CDS TCA 72 bp GGTCTTCACCACGATGTTCCTCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAGGCTGGTTTCTCGAAT +
Preference number: 6 (lower is better)
Translates to: GLHHDVPLEVAF*HRLGVQAGFSN
Trigger: ATTCGAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585543.6
ENST00000586125.2
ENST00000588735.3
ENST00000638304.1
ENST00000638618.1
ENST00000639277.1
ENST00000639369.1
CDS TCA 72 bp AACTCCTCCTTTATATGGACACAGGCTCAGAATAGGTaGGCTCGCTGCCCACAGTCACAAAGCCCAGCCATG +
Preference number: 6 (lower is better)
Translates to: NSSFIWTQAQNR*ARCPQSQSPAM
Trigger: CATGGCTGGGCTTTGTGACTGTGGGCAGCGAGCTCACCTATTCTGAGCCTGTGTCCATATAAAGGAGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS TCA 72 bp GGTCTTCACCACGATGTTCCTCTTGAGGTGGCCTTCTaGCACAGACTTGGTGTCCAGGCTGGTTTTGCAAGA +
Preference number: 6 (lower is better)
Translates to: GLHHDVPLEVAF*HRLGVQAGFAR
Trigger: TCTTGCAAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTGAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592706.5
CDS GCA 72 bp ACTAAGGTGCCTTATCAGGGTTGGTGCACCTGCTTCTaGTCACACAGGCGCATCCACAAGCATACACTCACT +
Preference number: 6 (lower is better)
Translates to: TKVPYQGWCTCF*SHRRIHKHTLT
Trigger: AGTGAGTGTATGCTTGTGGATGCGCCTGTGTGAGCAGAAGCAGGTGCACCAACCCTGATAAGGCACCTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS TCA 72 bp ACAGACTGGCAGAGGCATGGAATGCAGGCTCCCAAGTaGGATGTGCTAGAGTTGGAAATCCAACTCTACCAC +
Preference number: 6 (lower is better)
Translates to: TDWQRHGMQAPK*DVLELEIQLYH
Trigger: GTGGTAGAGTTGGATTTCCAACTCTAGCACATCTCACTTGGGAGCCTGCATTCCATGCCTCTGCCAGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588640.5
CDS CCA 72 bp AGAGGCTCAGTAACCCAAAACAGACTGGCAGAGGCATaGAATGCAGGCTCCCAAGTGAGATGTGCTAGAGTT +
Preference number: 6 (lower is better)
Translates to: RGSVTQNRLAEA*NAGSQVRCARV
Trigger: AACTCTAGCACATCTCACTTGGGAGCCTGCATTCCATGCCTCTGCCAGTCTGTTTTGGGTTACTGAGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588640.5
CDS CCA 72 bp TTCCTGGCTCCCACACTACATATAAGCTCTGAGCTGTaGTGTTCTCTACGGGCACTATGTTTGGGTGCACGT +
Preference number: 6 (lower is better)
Translates to: FLAPTLHISSEL*CSLRALCLGAR
Trigger: ACGTGCACCCAAACATAGTGCCCGTAGAGAACACCACAGCTCAGAGCTTATATGTAGTGTGGGAGCCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591719.5
CDS TCA 72 bp GTTTCGCGAGCCGGCGGCGTTCCATTTACAATCTGGTaGGCCTGTATTGGTATAACTCGTATTGTGAGGCTT +
Preference number: 6 (lower is better)
Translates to: VSRAGGVPFTIW*ACIGITRIVRL
Trigger: AAGCCTCACAATACGAGTTATACCAATACAGGCTCACCAGATTGTAAATGGAACGCCGCCGGCTCGCGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253408.11
CDS GCA 72 bp GCAGATGTGGGCTTTTGCCTTAACTCATTACTAAGGTaGCTTATCAGGGTTGGTGCACCTGCTTCTGCTCAC +
Preference number: 6 (lower is better)
Translates to: ADVGFCLNSLLR*LIRVGAPASAH
Trigger: GTGAGCAGAAGCAGGTGCACCAACCCTGATAAGGCACCTTAGTAATGAGTTAAGGCAAAAGCCCACATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586127.6
ENST00000591327.2
CDS CCA 72 bp AGGCAGCCAGGTTGTTCTCGGCTTCCAGCCTCAGGTTaGTTTCATCCTGGAGCAATTATTATGCATCAATTA +
Preference number: 6 (lower is better)
Translates to: RQPGCSRLPASG*FHPGAIIMHQL
Trigger: TAATTGATGCATAATAATTGCTCCAGGATGAAACCAACCTGAGGCTGGAAGCCGAGAACAACCTGGCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588957.5