RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GET4 (Homo sapiens)

Ensembl gene IDs: ENSG00000239857

Ensembl transcript IDs: ENST00000265857.8, ENST00000407192.5, ENST00000412734.6, ENST00000426056.1, ENST00000441491.1, ENST00000464468.1

Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GGGCCCTGGCTGGGCTCTCAGGTCCGAGGGCCAGCACCTGCTTTGGTGACCGCAAGCCGTCGTCGACCGTaGTGTCTCCACGTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GPWLGSQVRGPAPALVTASRRRP*CLHVAW
Trigger: CCAGGCCACGTGGAGACACCACGGTCGACGACGGCT...TGCGGTCACCAAAGCAGGTGCTGGCCCTCGGACCTGAGAGCCCAGCCAGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR TCA 90 bp CGCAGGGCACGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGACCCAGGACTCGCCTCTaGAACGTCCCTCCAGCCGTC +
Preference number: 2 (lower is better)
Translates to: RRARALRLRRGPVRPDCRPRTRL*NVPPAV
Trigger: GACGGCTGGAGGGACGTTTCAGAGGCGAGTCCTGGG...TCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACGTGCCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR GCA 90 bp ATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGAGGACGGGCCTCCTGTaGTGCCCATCAGCCCTCCCG +
Preference number: 2 (lower is better)
Translates to: MPHGTQLQVPVGTVPPHARTGLL*CPSALP
Trigger: CGGGAGGGCTGATGGGCAGCACAGGAGGCCCGTCCT...CGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR GCA 90 bp CCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGTCCCACGTGCACTCCGTCTaGGACGGGGACCGGTTCGTC +
Preference number: 2 (lower is better)
Translates to: PHGTQLQVPVGTVPPHASHVHSV*DGDRFV
Trigger: GACGAACCGGTCCCCGTCGCAGACGGAGTGCACGTG...GGACGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR TCA 90 bp GATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCAGGAGTGGGAGAGGGTaGCGCCGCGGTAAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: DATWDTAASTRRHRPAARRSGRG*RRGKAC
Trigger: ACAGGCCTTACCGCGGCGTCACCCTCTCCCACTCCT...GCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR TCA 90 bp TGGCGCTCACAGAGACCAGCAGGGCGCAGCTCTGGGATGCCACATGGGACACAGCCCAGGACTCGCCTCTaGAACGTCCCTCCAGCCGTC +
Preference number: 2 (lower is better)
Translates to: WRSQRPAGRSSGMPHGTQPRTRL*NVPPAV
Trigger: GACGGCTGGAGGGACGTTTCAGAGGCGAGTCCTGGG...CTGTGTCCCATGTGGCATCCCAGAGCTGCGCCCTGCTGGTCTCTGTGAGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR TCA 90 bp TGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGAGGGTGGCAGCCGCGCCACCCTaGGCCGCCGCACAGAAACAG +
Preference number: 2 (lower is better)
Translates to: CCPSALPKGPRTKEWERVAAAPP*AAAQKQ
Trigger: CTGTTTCTGTGCGGCGGCTCAGGGTGGCGCGGCTGC...CACCCTCTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR GCA 90 bp ATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGCCGAGGGCCAGCACCTaGTTTGGTGACCGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: MPHGTQLQVPVGTVPPHAPRAST*FGDRSC
Trigger: ACAGCTGCGGTCACCAAAGCAGGTGCTGGCCCTCGG...CGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR CCA 90 bp GATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCAGACCACATGGGCCCTaGCTGGGCTCTCAGGTCCGA +
Preference number: 2 (lower is better)
Translates to: DATWDTAASTRRHRPAARRPHGP*LGSQVR
Trigger: TCGGACCTGAGAGCCCAGCCAGGGCCCATGTGGTCT...GCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR TCA 90 bp ACCCCGTGTTCAAAAACAGCCGCTCCCATTTGCAGACCACATGGGCCCTGGCTGGCAGCCGCGCCACCCTaGGCCGCCGCACAGAAACAG +
Preference number: 2 (lower is better)
Translates to: TPCSKTAAPICRPHGPWLAAAPP*AAAQKQ
Trigger: CTGTTTCTGTGCGGCGGCTCAGGGTGGCGCGGCTGC...CAGCCAGGGCCCATGTGGTCTGCAAATGGGAGCGGCTGTTTTTGAACACGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR TCA 90 bp GTCCCACGGTATCCCTTTTTAAAGCGGCATTTCCAGCACAGCAGCGTGGCGCTCGTCCCAGCAGCACAGTaGGCAGCAGCCGCGCCACCC +
Preference number: 2 (lower is better)
Translates to: VPRYPFLKRHFQHSSVALVPAAQ*AAAAPP
Trigger: GGGTGGCGCGGCTGCTGCTCACTGTGCTGCTGGGAC...GAGCGCCACGCTGCTGTGCTGGAAATGCCGCTTTAAAAAGGGATACCGTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR GCA 90 bp ATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGCCGGTTCGTCCTGACTaGAGAATGACCCCGTGTTCA +
Preference number: 2 (lower is better)
Translates to: MPHGTQLQVPVGTVPPHAPVRPD*RMTPCS
Trigger: TGAACACGGGGTCATTCTGCAGTCAGGACGAACCGG...CGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR CCA 90 bp GTCCCACGGTATCCCTTTTTAAAGCGGCATTTCCAGCACAGCAGCGTGGCGCTCAGCCGTCGTCGACCGTaGTGTCTCCACGTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: VPRYPFLKRHFQHSSVALSRRRP*CLHVAW
Trigger: CCAGGCCACGTGGAGACACCACGGTCGACGACGGCT...GAGCGCCACGCTGCTGTGCTGGAAATGCCGCTTTAAAAAGGGATACCGTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR GCA 90 bp GTCCCACGGTATCCCTTTTTAAAGCGGCATTTCCAGCACAGCAGCGTGGCGCTCACGGGCCTCCTGTGCTaGCCATCAGCCCTCCCGAAA +
Preference number: 2 (lower is better)
Translates to: VPRYPFLKRHFQHSSVALTGLLC*PSALPK
Trigger: TTTCGGGAGGGCTGATGGGCAGCACAGGAGGCCCGT...GAGCGCCACGCTGCTGTGCTGGAAATGCCGCTTTAAAAAGGGATACCGTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR GCA 90 bp TCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAACCCAAAAGACACGCGCCGGCATaGGGCCACCGCCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: SDRTELLTPGPVIWLKPKRHAPA*GHRQPQ
Trigger: CTGAGGCTGGCGGTGGCCGCATGCCGGCGCGTGTCT...TTTGGGTTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR GCA 90 bp GTAGCATCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAAGTGGCGCAGGGCACGTaGACTCCGTCTGCGACGGGG +
Preference number: 2 (lower is better)
Translates to: VASDRTELLTPGPVIWLKVAQGT*TPSATG
Trigger: CCCCGTCGCAGACGGAGTGCACGTGCCCTGCGCCAC...TTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGATGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR CCA 90 bp GGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAAACAGCCGCTCCCGCCTGTGCTTTATTGTaGGTCAATCTCGGGGGACGC +
Preference number: 2 (lower is better)
Translates to: GPVRPDCRMTPCSKTAAPACALL*VNLGGR
Trigger: GCGTCCCCCGAGATTGACCCACAATAAAGCACAGGC...GGGAGCGGCTGTTTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR GCA 90 bp CCTTTTGTCATCGTTCTGGTAACATTTGGAGTAGCATCTGACAGAACGGAGCTGAGACACGCGCCGGCATaGGGCCACCGCCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: PFVIVLVTFGVASDRTELRHAPA*GHRQPQ
Trigger: CTGAGGCTGGCGGTGGCCGCATGCCGGCGCGTGTCT...CAGCTCCGTTCTGTCAGATGCTACTCCAAATGTTACCAGAACGATGACAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR CCA 90 bp GTCCCACGGTATCCCTTTTTAAAGCGGCATTTCCAGCACAGCAGCGTGGCGCTCGCCTGTGCTTTATTGTaGGTCAATCTCGGGGGACGC +
Preference number: 2 (lower is better)
Translates to: VPRYPFLKRHFQHSSVALACALL*VNLGGR
Trigger: GCGTCCCCCGAGATTGACCCACAATAAAGCACAGGC...GAGCGCCACGCTGCTGTGCTGGAAATGCCGCTTTAAAAAGGGATACCGTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR TCA 90 bp GTAGCATCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAAAGGAGTGGGAGAGGGTaGCGCCGCGGTAAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: VASDRTELLTPGPVIWLKRSGRG*RRGKAC
Trigger: ACAGGCCTTACCGCGGCGTCACCCTCTCCCACTCCT...TTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGATGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR TCA 90 bp GTAGCATCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAACAGCACCTGCTTTGGTaGCCGCAGCTGTGCCGGACG +
Preference number: 2 (lower is better)
Translates to: VASDRTELLTPGPVIWLKQHLLW*PQLCRT
Trigger: CGTCCGGCACAGCTGCGGTCACCAAAGCAGGTGCTG...TTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGATGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR CCA 90 bp GTAGCATCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAACCGAGCGTGAGGATGTaGCGCAGGGCACGTGCACTC +
Preference number: 2 (lower is better)
Translates to: VASDRTELLTPGPVIWLKPSVRM*RRARAL
Trigger: GAGTGCACGTGCCCTGCGCCACATCCTCACGCTCGG...TTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGATGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR CCA 90 bp TCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAACCCAAACCCAGAACAAAGGAGTaGGAGAGGGTGACGCCGCGG +
Preference number: 2 (lower is better)
Translates to: SDRTELLTPGPVIWLKPKPRTKE*ERVTPR
Trigger: CCGCGGCGTCACCCTCTCCCACTCCTTTGTTCTGGG...TTTGGGTTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR CCA 90 bp ACAGTAAATAAAGCTGTGCGTTTCCCCTTCCCATGCACAACTGCGTATCAATCTCACATGGGCCCTGGCTaGGCTCTCAGGTCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: TVNKAVRFPFPCTTAYQSHMGPG*ALRSEG
Trigger: GCCCTCGGACCTGAGAGCCCAGCCAGGGCCCATGTG...AGATTGATACGCAGTTGTGCATGGGAAGGGGAAACGCACAGCTTTATTTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR GCA 90 bp ACAGTAAATAAAGCTGTGCGTTTCCCCTTCCCATGCACAACTGCGTATCAATCTCCGAGGGCCAGCACCTaGTTTGGTGACCGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: TVNKAVRFPFPCTTAYQSPRAST*FGDRSC
Trigger: ACAGCTGCGGTCACCAAAGCAGGTGCTGGCCCTCGG...AGATTGATACGCAGTTGTGCATGGGAAGGGGAAACGCACAGCTTTATTTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR CCA 90 bp CCTTTTGTCATCGTTCTGGTAACATTTGGAGTAGCATCTGACAGAACGGAGCTGAGCAGGGCGCAGCTCTaGGATGCCACATGGGACACA +
Preference number: 2 (lower is better)
Translates to: PFVIVLVTFGVASDRTELSRAQL*DATWDT
Trigger: TGTGTCCCATGTGGCATCCCAGAGCTGCGCCCTGCT...CAGCTCCGTTCTGTCAGATGCTACTCCAAATGTTACCAGAACGATGACAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR GCA 90 bp TCCCCTTCCCATGCACAACTGCGTATCAATCTACAACTGTCATTTAACTGTGAAACGGGCCTCCTGTGCTaGCCATCAGCCCTCCCGAAA +
Preference number: 2 (lower is better)
Translates to: SPSHAQLRINLQLSFNCETGLLC*PSALPK
Trigger: TTTCGGGAGGGCTGATGGGCAGCACAGGAGGCCCGT...TTCACAGTTAAATGACAGTTGTAGATTGATACGCAGTTGTGCATGGGAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR GCA 90 bp ACAGTAAATAAAGCTGTGCGTTTCCCCTTCCCATGCACAACTGCGTATCAATCTCCGGTTCGTCCTGACTaGAGAATGACCCCGTGTTCA +
Preference number: 2 (lower is better)
Translates to: TVNKAVRFPFPCTTAYQSPVRPD*RMTPCS
Trigger: TGAACACGGGGTCATTCTGCAGTCAGGACGAACCGG...AGATTGATACGCAGTTGTGCATGGGAAGGGGAAACGCACAGCTTTATTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR TCA 90 bp ACAGTAAATAAAGCTGTGCGTTTCCCCTTCCCATGCACAACTGCGTATCAATCTGTCCTGACTGCAGAATaGCCCCGTGTTCAAAAACAG +
Preference number: 2 (lower is better)
Translates to: TVNKAVRFPFPCTTAYQSVLTAE*PRVQKQ
Trigger: CTGTTTTTGAACACGGGGTCATTCTGCAGTCAGGAC...AGATTGATACGCAGTTGTGCATGGGAAGGGGAAACGCACAGCTTTATTTACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR TCA 90 bp CCTTTTGTCATCGTTCTGGTAACATTTGGAGTAGCATCTGACAGAACGGAGCTGATAAATATTGCGTTATaGAAGAGACGGGCAGAGTCC +
Preference number: 2 (lower is better)
Translates to: PFVIVLVTFGVASDRTELINIAL*KRRAES
Trigger: GGACTCTGCCCGTCTCTTTCATAACGCAATATTTAT...CAGCTCCGTTCTGTCAGATGCTACTCCAAATGTTACCAGAACGATGACAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR GCA 90 bp GTAGAAAGGGTTTATTTATGCGCAACGGTTCACACAAGCCTTCCTGAAATTCCACTTCCCATGCACAACTaGGTATCAATCTACAACTGT +
Preference number: 2 (lower is better)
Translates to: VERVYLCATVHTSLPEIPLPMHN*VSIYNC
Trigger: ACAGTTGTAGATTGATACGCAGTTGTGCATGGGAAG...TGGAATTTCAGGAAGGCTTGTGTGAACCGTTGCGCATAAATAAACCCTTTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR CAA 90 bp AAAGAGACGGGCAGAGTCCCACGGTATCCCTTTTTAAAGCGGCATTTCCAGCACAACAGCCGCTCCCATTaGCAGACCACATGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: KETGRVPRYPFLKRHFQHNSRSH*QTTWAL
Trigger: CAGGGCCCATGTGGTCTGCAAATGGGAGCGGCTGTT...GTGCTGGAAATGCCGCTTTAAAAAGGGATACCGTGGGACTCTGCCCGTCTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
3UTR-3UTR CAA 90 bp AATCAATCATCACCCAATACAAATAAATATTGCGTTATGAAAGAGACGGGCAGAAAGGCCTGTGCTTTATaGTGGGTCAATCTCGGGGGA +
Preference number: 3 (lower is better)
Translates to: NQSSPNTNKYCVMKETGRKACAL*WVNLGG
Trigger: TCCCCCGAGATTGACCCACAATAAAGCACAGGCCTT...TCTGCCCGTCTCTTTCATAACGCAATATTTATTTGTATTGGGTGATGATTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR TCA 90 bp CCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGTCCCGCTCCGCGCAGGGCTaGCGCTGTCGCAGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: PHGTQLQVPVGTVPPHASRSAQG*RCRRRG
Trigger: ACCGCGCCTGCGACAGCGTCAGCCCTGCGCGGAGCG...GGACGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS-3UTR GCA 90 bp CGCAGGGCACGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGACGCCTGGCCTCACGATaGCGCCAGTGGGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: RRARALRLRRGPVRPDCRRLASR*RQWGHG
Trigger: CCCGTGGCCCCACTGGCGGCATCGTGAGGCCAGGCG...TCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACGTGCCCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp CCTCCACCGAGCGTGAGGATGTGGCGCAGGGCACGTGCACTCCGTCTGCGACGGGCACCCCCGTCAGCCTaGAGGCCGTTGGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PPPSVRMWRRARALRLRRAPPSA*RPLAGL
Trigger: GAGGCCTGCCAACGGCCTGCAGGCTGACGGGGGTGC...CCGTCGCAGACGGAGTGCACGTGCCCTGCGCCACATCCTCACGCTCGGTGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp GCCACCCTGAGCCGCCGCACAGAAACAGACACGCGCCGGCATGCGGCCACCGCCCTGCAGGGACATGACTaGCTCAGAGGAGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: ATLSRRTETDTRRHAATALQGHD*LRGGRE
Trigger: CTCCCGGCCTCCTCTGAGTCAGTCATGTCCCTGCAG...GGCGGTGGCCGCATGCCGGCGCGTGTCTGTTTCTGTGCGGCGGCTCAGGGTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp CGCAGGGCACGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAGGCGCTGAGAGCCAGTaGGCGCTGGTGCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RRARALRLRRGPVRPDCRGAESQ*ALVLSA
Trigger: GGCAGAGAGCACCAGCGCTCACTGGCTCTCAGCGCC...TCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACGTGCCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp GGGCCCTGGCTGGGCTCTCAGGTCCGAGGGCCAGCACCTGCTTTGGTGACCGCATGGCCACCTGAGAGCTaGGTGGCCACAGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GPWLGSQVRGPAPALVTAWPPES*VATGRS
Trigger: GCTCCTGCCTGTGGCCACTCAGCTCTCAGGTGGCCA...TGCGGTCACCAAAGCAGGTGCTGGCCCTCGGACCTGAGAGCCCAGCCAGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp CGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGCGCTGGCGCGCAGCTTaGCCTCCACACGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: RALRLRRGPVRPDCRMTPRWRAA*PPHAGR
Trigger: GCGTCCAGCGTGTGGAGGGCAAGCTGCGCGCCAGCG...CGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS-3UTR CCA 90 bp GCCACCCAGGACTCGCCTCTGAAACGTCCCTCCAGCCGTCGTCGACCGTGGTGTTTGCCCTCCACACGCTaGACGCCGCCGCGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: ATQDSPLKRPSSRRRPWCLPSTR*TPPRLR
Trigger: CCGCAACCGCGGCGGCGTCCAGCGTGTGGAGGGCAA...ACACCACGGTCGACGACGGCTGGAGGGACGTTTCAGAGGCGAGTCCTGGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS-3UTR CCA 90 bp AGCCACCCAGGACTCGCCTCTGAAACGTCCCTCCAGCCGTCGTCGACCGTGGTGCAGTGGTCCCCGGCCTaGCTGGGGGCACCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: SHPGLASETSLQPSSTVVQWSPA*LGAPVS
Trigger: GGAAACGGGTGCCCCCAGCCAGGCCGGGGACCACTG...CACCACGGTCGACGACGGCTGGAGGGACGTTTCAGAGGCGAGTCCTGGGTGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGGCCCCCGGCCTGGTTTaGACTGCGCCTTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RALRLRRGPVRPDCRMTPAPGLV*TAPCSR
Trigger: CCGGCTGCAAGGCGCAGTCCAAACCAGGCCGGGGGC...CGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp GGGCCCTGGCTGGGCTCTCAGGTCCGAGGGCCAGCACCTGCTTTGGTGACCGCATCACGGCCCCCGGCCTaGTTTGGACTGCGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GPWLGSQVRGPAPALVTASRPPA*FGLRLA
Trigger: TGCAAGGCGCAGTCCAAACCAGGCCGGGGGCCGTGA...TGCGGTCACCAAAGCAGGTGCTGGCCCTCGGACCTGAGAGCCCAGCCAGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CGCAGGGCACGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGATCACGATGCCGCCAGTaGGGCCACGGGCAGAACCGC +
Preference number: 4 (lower is better)
Translates to: RRARALRLRRGPVRPDCRSRCRQ*GHGQNR
Trigger: GCGGTTCTGCCCGTGGCCCCACTGGCGGCATCGTGA...TCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACGTGCCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp GCCACCCTGAGCCGCCGCACAGAAACAGACACGCGCCGGCATGCGGCCACCGCCGGCCGCAGTAAGCCATaGTTGCACCACTGCCTAGAC +
Preference number: 4 (lower is better)
Translates to: ATLSRRTETDTRRHAATAGRSKP*LHHCLD
Trigger: GTCTAGGCAGTGGTGCAATCATGGCTTACTGCGGCC...GGCGGTGGCCGCATGCCGGCGCGTGTCTGTTTCTGTGCGGCGGCTCAGGGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp GGGCCCTGGCTGGGCTCTCAGGTCCGAGGGCCAGCACCTGCTTTGGTGACCGCAACCCAAGAGAGAAAGTaGCCCCGCACCCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GPWLGSQVRGPAPALVTATQERK*PRTPVS
Trigger: GCTGACGGGGGTGCGGGGGCACTTTCTCTCTTGGGT...TGCGGTCACCAAAGCAGGTGCTGGCCCTCGGACCTGAGAGCCCAGCCAGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGCGCCCTTCTCGACGCTaGCGCGCAGCTTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RALRLRRGPVRPDCRMTPRPSRR*RAACPP
Trigger: TGGAGGGCAAGCTGCGCGCCAGCGTCGAGAAGGGCG...CGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS-3UTR GCA 90 bp ATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGAGCAGAGCCCCTGCCTaGGAGAGCAGCAGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: MPHGTQLQVPVGTVPPHASRAPA*ESSRRG
Trigger: TCCACGCCTGCTGCTCTCGCAGGCAGGGGCTCTGCT...CGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp GCCACCCAGGACTCGCCTCTGAAACGTCCCTCCAGCCGTCGTCGACCGTGGTGTACGAGGAGCCTGCTCTaGGGGGCACTGCCGATGGTC +
Preference number: 4 (lower is better)
Translates to: ATQDSPLKRPSSRRRPWCTRSLL*GALPMV
Trigger: GACCATCGGCAGTGCCCCCCAGAGCAGGCTCCTCGT...ACACCACGGTCGACGACGGCTGGAGGGACGTTTCAGAGGCGAGTCCTGGGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CGCAGGGCACGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAAGGCCGGGAGCCGTCTaGCACAGGGCACTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RRARALRLRRGPVRPDCRRPGAV*HRALWK
Trigger: TTTCCAGAGTGCCCTGTGCCAGACGGCTCCCGGCCT...TCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACGTGCCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp GCCACCCAGGACTCGCCTCTGAAACGTCCCTCCAGCCGTCGTCGACCGTGGTGTGCTGGCAGGGAAAGCTaGAGCTCCTCAGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: ATQDSPLKRPSSRRRPWCAGRES*SSSGRT
Trigger: CGTGCGGCCTGAGGAGCTCCAGCTTTCCCTGCCAGC...ACACCACGGTCGACGACGGCTGGAGGGACGTTTCAGAGGCGAGTCCTGGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp GCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGTCCTCCCAGAGCACCGCTaGCAGGGAAAGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ATWDTAASTRRHRPAARVLPEHR*QGKLEL
Trigger: GAGCTCCAGCTTTCCCTGCCAGCGGTGCTCTGGGAG...GACGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp CGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAATTCCGGGCGCTCTCCTaGTCGGCCATCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RLRRGPVRPDCRMTPCSKFRALS*SAIAAA
Trigger: GGCGGCGGCGATGGCCGAGCAGGAGAGCGCCCGGAA...TTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS-3UTR GCA 90 bp ACATGGGCCCTGGCTGGGCTCTCAGGTCCGAGGGCCAGCACCTGCTTTGGTGACGCAGGCCTCCGGTTTTaGTGTGCTCCCCGCACAGTG +
Preference number: 4 (lower is better)
Translates to: TWALAGLSGPRASTCFGDAGLRF*CAPRTV
Trigger: CACTGTGCGGGGAGCACAGCAAAACCGGAGGCCTGC...GTCACCAAAGCAGGTGCTGGCCCTCGGACCTGAGAGCCCAGCCAGGGCCCATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp GATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCCAGCCTGCAGGCCGTTaGCAGGCCTCCGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: DATWDTAASTRRHRPAARQPAGR*QASGFA
Trigger: AGCAAAACCGGAGGCCTGCCAACGGCCTGCAGGCTG...GCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGCGGGAGGGAAGGGTCTaGGGTGCCCCGTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: RALRLRRGPVRPDCRMTPREGRV*GAPLHH
Trigger: ATGATGCAACGGGGCACCCCAGACCCTTCCCTCCCG...CGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp GGGCCCTGGCTGGGCTCTCAGGTCCGAGGGCCAGCACCTGCTTTGGTGACCGCATGCATGGGGCGCCTCTaGACACTAAGGGCCTATCTG +
Preference number: 4 (lower is better)
Translates to: GPWLGSQVRGPAPALVTACMGRL*TLRAYL
Trigger: CAGATAGGCCCTTAGTGTCCAGAGGCGCCCCATGCA...TGCGGTCACCAAAGCAGGTGCTGGCCCTCGGACCTGAGAGCCCAGCCAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp AGGCCTGTGCTTTATTGTGGGTCAATCTCGGGGGACGCGGCGGCCAGCAGGGGCGTGGGGACCAGCGCGTaGCAGACGATGTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RPVLYCGSISGDAAASRGVGTSA*QTMWRE
Trigger: TTCTCTCCACATCGTCTGTCACGCGCTGGTCCCCAC...GCCCCTGCTGGCCGCCGCGTCCCCCGAGATTGACCCACAATAAAGCACAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp ATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGGCGCACTATTGGCCGTaGCATGTGGACACCCAGACG +
Preference number: 4 (lower is better)
Translates to: MPHGTQLQVPVGTVPPHAAHYWP*HVDTQT
Trigger: CGTCTGGGTGTCCACATGGCACGGCCAATAGTGCGC...CGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp GCCACCCTGAGCCGCCGCACAGAAACAGACACGCGCCGGCATGCGGCCACCGCCTCCGTGTGCTTGCTCTaGGACATGTACCTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ATLSRRTETDTRRHAATASVCLL*DMYLKN
Trigger: GTTCTTCAGGTACATGTCCCAGAGCAAGCACACGGA...GGCGGTGGCCGCATGCCGGCGCGTGTCTGTTTCTGTGCGGCGGCTCAGGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS-3UTR CCA 90 bp TGGCGCTCACAGAGACCAGCAGGGCGCAGCTCTGGGATGCCACATGGGACACAGTCTTCCCTGGGCAGCTaGGAGCCGGGCAAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: WRSQRPAGRSSGMPHGTQSSLGS*EPGKGK
Trigger: TTTCCCCTTGCCCGGCTCCCAGCTGCCCAGGGAAGA...CTGTGTCCCATGTGGCATCCCAGAGCTGCGCCCTGCTGGTCTCTGTGAGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp ATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGGCGCCCAGGAACAGGTaGCATCCTAAAAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: MPHGTQLQVPVGTVPPHAAPRNR*HPKSSR
Trigger: GCGGCTGCTTTTAGGATGCCACCTGTTCCTGGGCGC...CGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp CTCCTGTGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGCCTGCTGACAGGCGCTaGGAGCCAGTGAGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLCCPSALPKGPRTKEWEPADRR*EPVSAG
Trigger: ACCAGCGCTCACTGGCTCTCAGCGCCTGTCAGCAGG...CTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCACAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp CGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGGTCCAGGAATGCCGGTaGCAGGCAAACCGTCTAAGG +
Preference number: 4 (lower is better)
Translates to: RALRLRRGPVRPDCRMTPVQECR*QANRLR
Trigger: CCTTAGACGGTTTGCCTGTCACCGGCATTCCTGGAC...CGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp GATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCCTCCCTGGAAGGCAGTaGCCCATATTCCTGCACGAG +
Preference number: 4 (lower is better)
Translates to: DATWDTAASTRRHRPAARLPGRQ*PIFLHE
Trigger: CTCGTGCAGGAATATGGGTCACTGCCTTCCAGGGAG...GCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp CCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGTCCAGTGACCCATATTCCTaGACGAGGAGCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PHGTQLQVPVGTVPPHASSDPYS*TRSLLW
Trigger: CCAGAGCAGGCTCCTCGTGCAGGAATATGGGTCACT...GGACGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp TGGCGCTCACAGAGACCAGCAGGGCGCAGCTCTGGGATGCCACATGGGACACAGGCATCATGCTCGCCCTaGATCACGTCCCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: WRSQRPAGRSSGMPHGTQASCSP*ITSPLP
Trigger: TGGGAGTGGGGACGTGATGCAGGGCGAGCATGATGC...CTGTGTCCCATGTGGCATCCCAGAGCTGCGCCCTGCTGGTCTCTGTGAGCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp TGGCGCTCACAGAGACCAGCAGGGCGCAGCTCTGGGATGCCACATGGGACACAGGGGCCTCCGTGTGCTTaGTCTGGGACATGTACCTGC +
Preference number: 4 (lower is better)
Translates to: WRSQRPAGRSSGMPHGTQGPPCA*SGTCTC
Trigger: GCAGGTACATGTCCCAGAGCAAGCACACGGAGGCCC...CTGTGTCCCATGTGGCATCCCAGAGCTGCGCCCTGCTGGTCTCTGTGAGCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp AGCCACCCAGGACTCGCCTCTGAAACGTCCCTCCAGCCGTCGTCGACCGTGGTGCATGCTGCGCACTATTaGCCGTGCCATGTGGACACC +
Preference number: 4 (lower is better)
Translates to: SHPGLASETSLQPSSTVVHAAHY*PCHVDT
Trigger: GGTGTCCACATGGCACGGCCAATAGTGCGCAGCATG...CACCACGGTCGACGACGGCTGGAGGGACGTTTCAGAGGCGAGTCCTGGGTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CTCCTGTGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGGGGTGGCGAGAGGTATaGTGGGGACCAGCGCGTGAC +
Preference number: 4 (lower is better)
Translates to: LLCCPSALPKGPRTKEWEGWREV*WGPARD
Trigger: GTCACGCGCTGGTCCCCACCATACCTCTCGCCACCC...CTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCACAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp CGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAACCTCGACAGGACCACTaGCTCTGTGACCGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RLRRGPVRPDCRMTPCSKPRQDH*LCDRPS
Trigger: GGACGGCCGGTCACAGAGTCAGTGGTCCTGTCGAGG...TTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp GCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGTCGTGGACACCCAGACGTaGCTTCCAGATAGGGAAATG +
Preference number: 4 (lower is better)
Translates to: ATWDTAASTRRHRPAARVVDTQT*LPDREM
Trigger: CATTTCCCTATCTGGAAGGCACGTCTGGGTGTCCAC...GACGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp GGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAAACAGCCGCTCCCCTCCCGGCCCGGCTCTaGATGCTGCGCACTATTGGC +
Preference number: 4 (lower is better)
Translates to: GPVRPDCRMTPCSKTAAPLPARL*MLRTIG
Trigger: GCCAATAGTGCGCAGCATGCAGAGCCGGGCCGGGAG...GGGAGCGGCTGTTTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp GCCACCCAGGACTCGCCTCTGAAACGTCCCTCCAGCCGTCGTCGACCGTGGTGTCTGAGGTGGGAGGACTaGTTGAGTCCGGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: ATQDSPLKRPSSRRRPWCLRWED*LSPGSQ
Trigger: TTGACTACCCGGACTCAAGCAGTCCTCCCACCTCAG...ACACCACGGTCGACGACGGCTGGAGGGACGTTTCAGAGGCGAGTCCTGGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CTGTGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGAGGGAGGCAGCCTCTGCTTaGATGCGCTGCACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LCCPSALPKGPRTKEWEREAASA*MRCTSQ
Trigger: CTGGGAGGTGCAGCGCATCCAAGCAGAGGCTGCCTC...CCTCTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp CTCCTGTGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGCGTCTAAGGCGGCTCTaGACGTGGACGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLCCPSALPKGPRTKEWERLRRL*TWTASP
Trigger: AGGAGAAGCCGTCCACGTTCAGAGCCGCCTTAGACG...CTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCACAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp CCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGTCCCTGGATGCTTCTATCTaGGGTAAAGCAAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PHGTQLQVPVGTVPPHASLDASI*GKARGG
Trigger: GCCACCTCTTGCTTTACCTCAGATAGAAGCATCCAG...GGACGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp CGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAAGTGCATGTGGCCACCTaGGAGCTGAGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RLRRGPVRPDCRMTPCSKVHVAT*ELSGHR
Trigger: CCTGTGGCCACTCAGCTCTCAGGTGGCCACATGCAC...TTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp CTCCTGTGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGGTTTGGACTGCGCCTTaGAGCCGGCTCCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLCCPSALPKGPRTKEWEVWTAP*SRLPSS
Trigger: GGAAGAAGGGAGCCGGCTGCAAGGCGCAGTCCAAAC...CTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCACAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp CTGTGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGAGGACGGGCAGAACCGCATaGACCGACCCTGAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LCCPSALPKGPRTKEWERTGRTA*TDPEQA
Trigger: TGCTTGCTCAGGGTCGGTGCATGCGGTTCTGCCCGT...CCTCTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp CTCCTGTGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGTGCCCCGTTGCATCATaGTCGCCCTGCATCACGTCC +
Preference number: 4 (lower is better)
Translates to: LLCCPSALPKGPRTKEWECPVAS*SPCITS
Trigger: GGACGTGATGCAGGGCGAGCATGATGCAACGGGGCA...CTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCACAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp CTGTGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGAGGTCTGGGGTGCCCCGTTaGATCATGCTCGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LCCPSALPKGPRTKEWERSGVPR*IMLALH
Trigger: ATGCAGGGCGAGCATGATGCAACGGGGCACCCCAGA...CCTCTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp GATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCTGGCACAGGGCACTCTaGAAAAACAAGCTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: DATWDTAASTRRHRPAARWHRAL*KNKLPD
Trigger: GTCTGGGAGCTTGTTTTTCCAGAGTGCCCTGTGCCA...GCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CTGTGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGAGGTGGCGAGAGGTATGGTaGGGACCAGCGCGTGACAGA +
Preference number: 4 (lower is better)
Translates to: LCCPSALPKGPRTKEWERWREVW*GPARDR
Trigger: TCTGTCACGCGCTGGTCCCCACCATACCTCTCGCCA...CCTCTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp ACCCCGTGTTCAAAAACAGCCGCTCCCATTTGCAGACCACATGGGCCCTGGCTGATGGCTTCTGCCTGCTaGCAGGCGCTGAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TPCSKTAAPICRPHGPWLMASAC*QALRAS
Trigger: ACTGGCTCTCAGCGCCTGTCAGCAGGCAGAAGCCAT...CAGCCAGGGCCCATGTGGTCTGCAAATGGGAGCGGCTGTTTTTGAACACGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp CGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAAGCCAGTGAGCGCTGGTaGTCTCTGCCGGCCAAAACA +
Preference number: 4 (lower is better)
Translates to: RLRRGPVRPDCRMTPCSKASERW*SLPAKT
Trigger: TGTTTTGGCCGGCAGAGAGCACCAGCGCTCACTGGC...TTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAAAGAGCCAGTGAGCGCTaGTGCTCTCTGCCGGCCAAA +
Preference number: 4 (lower is better)
Translates to: RLRRGPVRPDCRMTPCSKRASER*CSLPAK
Trigger: TTTGGCCGGCAGAGAGCACCAGCGCTCACTGGCTCT...TTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CTCCTGTGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGATTGGCCGTGCCATGTaGACACCCAGACGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LLCCPSALPKGPRTKEWEIGRAM*TPRRAF
Trigger: GAAGGCACGTCTGGGTGTCCACATGGCACGGCCAAT...CTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCACAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp CCTCCACCGAGCGTGAGGATGTGGCGCAGGGCACGTGCACTCCGTCTGCGACGGACGCAAAGGGTTGGATaGTCAGTTAACCACAGAAAA +
Preference number: 4 (lower is better)
Translates to: PPPSVRMWRRARALRLRRTQRVG*SVNHRK
Trigger: TTTTCTGTGGTTAACTGAGCATCCAACCCTTTGCGT...CCGTCGCAGACGGAGTGCACGTGCCCTGCGCCACATCCTCACGCTCGGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp GCCACCCTGAGCCGCCGCACAGAAACAGACACGCGCCGGCATGCGGCCACCGCCCAAACAAAAACCAATTaGAGTGGAGGTGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: ATLSRRTETDTRRHAATAQTKTN*SGGDKE
Trigger: CTCTTTATCACCTCCACTGCAATTGGTTTTTGTTTG...GGCGGTGGCCGCATGCCGGCGCGTGTCTGTTTCTGTGCGGCGGCTCAGGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp GTCCCACGGTATCCCTTTTTAAAGCGGCATTTCCAGCACAGCAGCGTGGCGCTCCAGCCTCTGCTTGGATaGGCTGCACCTCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: VPRYPFLKRHFQHSSVALQPLLG*AAPPSP
Trigger: TGGACTGGGAGGTGCAGCGCATCCAAGCAGAGGCTG...GAGCGCCACGCTGCTGTGCTGGAAATGCCGCTTTAAAAAGGGATACCGTGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp GGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAAACAGCCGCTCCCTCTGGGACATGTACCTaGCACAGAGAGGAGACCGTG +
Preference number: 4 (lower is better)
Translates to: GPVRPDCRMTPCSKTAAPSGTCT*HREETV
Trigger: CACGGTCTCCTCTCTGTGGCAGGTACATGTCCCAGA...GGGAGCGGCTGTTTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp GTCCCACGGTATCCCTTTTTAAAGCGGCATTTCCAGCACAGCAGCGTGGCGCTCGGAGAGAAGCCGAGATaGCCGCACTGCTGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: VPRYPFLKRHFQHSSVALGEKPR*PHCCKQ
Trigger: CTGCTTACAGCAGTGCGGCCATCTCGGCTTCTCTCC...GAGCGCCACGCTGCTGTGCTGGAAATGCCGCTTTAAAAAGGGATACCGTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp GGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAAACAGCCGCTCCCACCGGTTTCAGTAGCTaGGACCAGAAAGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: GPVRPDCRMTPCSKTAAPTGFSS*DQKGHW
Trigger: CCAGTGGCCTTTCTGGTCCCAGCTACTGAAACCGGT...GGGAGCGGCTGTTTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp TCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAACCCAAACGGCCTGGTTTGGACTaGGCCTTGCAGCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SDRTELLTPGPVIWLKPKRPGLD*ALQPAP
Trigger: GGGAGCCGGCTGCAAGGCGCAGTCCAAACCAGGCCG...TTTGGGTTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp CTGTGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGAGGCACCAGCTTCTGCTTTaGCGATACTACAGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: LCCPSALPKGPRTKEWERHQLLL*RYYSVL
Trigger: CAGAACGCTGTAGTATCGGCAAAGCAGAAGCTGGTG...CCTCTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp AAAGAGACGGGCAGAGTCCCACGGTATCCCTTTTTAAAGCGGCATTTCCAGCACCCGAGATGGCCGCACTaGTGTAAGCAGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KETGRVPRYPFLKRHFQHPRWPH*CKQQSP
Trigger: GGGGCTCTGCTGCTTACAGCAGTGCGGCCATCTCGG...GTGCTGGAAATGCCGCTTTAAAAAGGGATACCGTGGGACTCTGCCCGTCTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp GTAGCATCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAAACAGAGAGGAGACCGTaGGCCACGCCCACGTGCCCT +
Preference number: 4 (lower is better)
Translates to: VASDRTELLTPGPVIWLKTERRP*ATPTCP
Trigger: AGGGCACGTGGGCGTGGCTCACGGTCTCCTCTCTGT...TTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGATGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp GGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAAACAGCCGCTCCCAATCAGCTCTGTGCCTaGGAGCCAAATGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GPVRPDCRMTPCSKTAAPNQLCA*EPNVLG
Trigger: TCCAAGGACATTTGGCTCGCAGGCACAGAGCTGATT...GGGAGCGGCTGTTTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp TGGCGCTCACAGAGACCAGCAGGGCGCAGCTCTGGGATGCCACATGGGACACAGGATACTACAGCGTTCTaGATGCTTCTATCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: WRSQRPAGRSSGMPHGTQDTTAF*MLLSEV
Trigger: TACCTCAGATAGAAGCATCCAGAACGCTGTAGTATC...CTGTGTCCCATGTGGCATCCCAGAGCTGCGCCCTGCTGGTCTCTGTGAGCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp TCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAACCCAAACCCGGCTCTGCATGCTaGGCACTATTGGCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SDRTELLTPGPVIWLKPKPGSAC*ALLAVP
Trigger: TGGCACGGCCAATAGTGCGCAGCATGCAGAGCCGGG...TTTGGGTTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp AAAGAGACGGGCAGAGTCCCACGGTATCCCTTTTTAAAGCGGCATTTCCAGCACTCTGCTTGGATGCGCTaGACCTCCCAGTCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: KETGRVPRYPFLKRHFQHSAWMR*TSQSSG
Trigger: ACCACTGGACTGGGAGGTGCAGCGCATCCAAGCAGA...GTGCTGGAAATGCCGCTTTAAAAAGGGATACCGTGGGACTCTGCCCGTCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp TCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAACCCAAAGCAGGAGGCAGCCTCTaGTTGGATGCGCTGCACCTC +
Preference number: 4 (lower is better)
Translates to: SDRTELLTPGPVIWLKPKAGGSL*LDALHL
Trigger: GAGGTGCAGCGCATCCAAGCAGAGGCTGCCTCCTGC...TTTGGGTTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CCTTTTGTCATCGTTCTGGTAACATTTGGAGTAGCATCTGACAGAACGGAGCTGATTCTGGGCACACAGTaGTCCCCGGCCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PFVIVLVTFGVASDRTELILGTQ*SPAWLG
Trigger: CCCCAGCCAGGCCGGGGACCACTGTGTGCCCAGAAT...CAGCTCCGTTCTGTCAGATGCTACTCCAAATGTTACCAGAACGATGACAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp CCTTTTGTCATCGTTCTGGTAACATTTGGAGTAGCATCTGACAGAACGGAGCTGCAGGAGACCGCTTCGTaGTGCACAGAGGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: PFVIVLVTFGVASDRTELQETAS*CTEAGH
Trigger: GTGCCCTGCCTCTGTGCAGCACGAAGCGGTCTCCTG...CAGCTCCGTTCTGTCAGATGCTACTCCAAATGTTACCAGAACGATGACAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp GTAGAAAGGGTTTATTTATGCGCAACGGTTCACACAAGCCTTCCTGAAATTCCACGGCCCGGCTCTGCATaGTGCGCACTATTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VERVYLCATVHTSLPEIPRPGSA*CALLAV
Trigger: CACGGCCAATAGTGCGCAGCATGCAGAGCCGGGCCG...TGGAATTTCAGGAAGGCTTGTGTGAACCGTTGCGCATAAATAAACCCTTTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp TCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAACCCAAAAAGGAGCAGGGGATGTaGATGTGGCCACCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SDRTELLTPGPVIWLKPKKEQGM*MWPPES
Trigger: GCTCTCAGGTGGCCACATGCACATCCCCTGCTCCTT...TTTGGGTTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CCTTTTGTCATCGTTCTGGTAACATTTGGAGTAGCATCTGACAGAACGGAGCTGACGGGAGGAGAATTCTaGGCACACAGTGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PFVIVLVTFGVASDRTELTGGEF*AHSGPR
Trigger: CCGGGGACCACTGTGTGCCCAGAATTCTCCTCCCGT...CAGCTCCGTTCTGTCAGATGCTACTCCAAATGTTACCAGAACGATGACAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp GTAGAAAGGGTTTATTTATGCGCAACGGTTCACACAAGCCTTCCTGAAATTCCAGGCCCAGGTGCTGCGTaGAGGGGGTCTATCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VERVYLCATVHTSLPEIPGPGAA*RGSILG
Trigger: ACCCAGGATAGACCCCCTCCACGCAGCACCTGGGCC...TGGAATTTCAGGAAGGCTTGTGTGAACCGTTGCGCATAAATAAACCCTTTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp GTAGAAAGGGTTTATTTATGCGCAACGGTTCACACAAGCCTTCCTGAAATTCCACGCATGCACCGACCCTaGGCAAGCACCACACCAGCT +
Preference number: 4 (lower is better)
Translates to: VERVYLCATVHTSLPEIPRMHRP*ASTTPA
Trigger: AGCTGGTGTGGTGCTTGCTCAGGGTCGGTGCATGCG...TGGAATTTCAGGAAGGCTTGTGTGAACCGTTGCGCATAAATAAACCCTTTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp TCCCCTTCCCATGCACAACTGCGTATCAATCTACAACTGTCATTTAACTGTGAAGGGAAGGGTCTGGGGTaGCCCGTTGCATCATGCTCG +
Preference number: 4 (lower is better)
Translates to: SPSHAQLRINLQLSFNCEGKGLG*PVASCS
Trigger: CGAGCATGATGCAACGGGGCACCCCAGACCCTTCCC...TTCACAGTTAAATGACAGTTGTAGATTGATACGCAGTTGTGCATGGGAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp GTCCCACGGTATCCCTTTTTAAAGCGGCATTTCCAGCACAGCAGCGTGGCGCTCTGTACTGGAGAATTCTaGAAGCTGCGAAGGATTTTG +
Preference number: 4 (lower is better)
Translates to: VPRYPFLKRHFQHSSVALCTGEF*KLRRIL
Trigger: CAAAATCCTTCGCAGCTTCCAGAATTCTCCAGTACA...GAGCGCCACGCTGCTGTGCTGGAAATGCCGCTTTAAAAAGGGATACCGTGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp TCCCCTTCCCATGCACAACTGCGTATCAATCTACAACTGTCATTTAACTGTGAAGACAGAGGCACGGGGTaGCGAGAGGTATGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SPSHAQLRINLQLSFNCEDRGTG*REVWWG
Trigger: TCCCCACCATACCTCTCGCCACCCCGTGCCTCTGTC...TTCACAGTTAAATGACAGTTGTAGATTGATACGCAGTTGTGCATGGGAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp TCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAACCCAAATCCGTGTGCTTGCTCTaGGACATGTACCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SDRTELLTPGPVIWLKPKSVCLL*DMYLPQ
Trigger: CTGTGGCAGGTACATGTCCCAGAGCAAGCACACGGA...TTTGGGTTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp TCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAACCCAAATCTGGGACATGTACCTaGAGAACAGGGTCCGGTACA +
Preference number: 4 (lower is better)
Translates to: SDRTELLTPGPVIWLKPKSGTCT*RTGSGT
Trigger: TGTACCGGACCCTGTTCTTCAGGTACATGTCCCAGA...TTTGGGTTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS-3UTR TCA 90 bp AAAGAGACGGGCAGAGTCCCACGGTATCCCTTTTTAAAGCGGCATTTCCAGCACATTTTGGTTTCCAGGTaGCTAAGCCAGGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: KETGRVPRYPFLKRHFQHILVSR*LSQDRY
Trigger: GTACCTGTCCTGGCTTAGTCACCTGGAAACCAAAAT...GTGCTGGAAATGCCGCTTTAAAAAGGGATACCGTGGGACTCTGCCCGTCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp AATCAATCATCACCCAATACAAATAAATATTGCGTTATGAAAGAGACGGGCAGAGGTCCCCGGCCTGGCTaGGGGCACCCGTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: NQSSPNTNKYCVMKETGRGPRPG*GHPFPG
Trigger: ACCTGGAAACGGGTGCCCCCAGCCAGGCCGGGGACC...TCTGCCCGTCTCTTTCATAACGCAATATTTATTTGTATTGGGTGATGATTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp ATTTATGCGCAACGGTTCACACAAGCCTTCCTGAAATTCCACTTTACAGTAAATGCAGGAGCCAAAGGATaGGGGGCTCCAGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: IYAQRFTQAFLKFHFTVNAGAKG*GAPGWG
Trigger: ACCCCAGCCTGGAGCCCCCCATCCTTTGGCTCCTGC...ATTTACTGTAAAGTGGAATTTCAGGAAGGCTTGTGTGAACCGTTGCGCATAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp CCTTTTGTCATCGTTCTGGTAACATTTGGAGTAGCATCTGACAGAACGGAGCTGCTTCTCCTCCTGTACTaGAGAATTCTGGAAGCTGCG +
Preference number: 4 (lower is better)
Translates to: PFVIVLVTFGVASDRTELLLLLY*RILEAA
Trigger: CGCAGCTTCCAGAATTCTCCAGTACAGGAGGAGAAG...CAGCTCCGTTCTGTCAGATGCTACTCCAAATGTTACCAGAACGATGACAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp AATCAATCATCACCCAATACAAATAAATATTGCGTTATGAAAGAGACGGGCAGAGCTCCCAGACACGCCTaGCCTCACGATGCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: NQSSPNTNKYCVMKETGRAPRHA*PHDAAS
Trigger: ACTGGCGGCATCGTGAGGCCAGGCGTGTCTGGGAGC...TCTGCCCGTCTCTTTCATAACGCAATATTTATTTGTATTGGGTGATGATTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR TCA 90 bp AATCAATCATCACCCAATACAAATAAATATTGCGTTATGAAAGAGACGGGCAGAGGACCACTGACTCTGTaGCCGGCCGTCCTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: NQSSPNTNKYCVMKETGRGPLTL*PAVLVP
Trigger: TGGAACTAGGACGGCCGGTCACAGAGTCAGTGGTCC...TCTGCCCGTCTCTTTCATAACGCAATATTTATTTGTATTGGGTGATGATTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR GCA 90 bp AATCAATCATCACCCAATACAAATAAATATTGCGTTATGAAAGAGACGGGCAGACCTCCGGTTTTGCTGTaGTCCCCGCACAGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: NQSSPNTNKYCVMKETGRPPVLL*SPHSEG
Trigger: ACCTTCACTGTGCGGGGAGCACAGCAAAACCGGAGG...TCTGCCCGTCTCTTTCATAACGCAATATTTATTTGTATTGGGTGATGATTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CCA 90 bp ATTTATGCGCAACGGTTCACACAAGCCTTCCTGAAATTCCACTTTACAGTAAATTTCCAGATAGGGAAATaGCTTCTGCCTGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: IYAQRFTQAFLKFHFTVNFQIGK*LLPADR
Trigger: CCTGTCAGCAGGCAGAAGCCATTTCCCTATCTGGAA...ATTTACTGTAAAGTGGAATTTCAGGAAGGCTTGTGTGAACCGTTGCGCATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 90 bp CGCTGGCGCGCAGCTTGCCCTCCACACGCTGGACGCCGCCGCGGTTaGGGCCGCCGTTCCGGGCGCTCTCCTGCTCGGCCATCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: RWRAACPPHAGRRRG*GRRSGRSPARPSPP
Trigger: CGGCGGCGATGGCCGAGCAGGAGAGCGCCCGGAACGGCGGCCGCAACCGCGGCGGCGTCCAGCGTGTGGAGGGCAAGCTGCGCGCCAGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS GCA 90 bp GGTGCGCCTCGTAGTAGTCGCCCTTCTCGACGCTGGCGCGCAGCTTaGCCTCCACACGCTGGACGCCGCCGCGGTTGCGGCCGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: GAPRSSRPSRRWRAA*PPHAGRRRGCGRRS
Trigger: GGAACGGCGGCCGCAACCGCGGCGGCGTCCAGCGTGTGGAGGGCAAGCTGCGCGCCAGCGTCGAGAAGGGCGACTACTACGAGGCGCACC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS GCA 90 bp GGGGCAGCTGGGCATGGCCGGGCCTTCTCCCGGCCCGGCTCTGCATaGTGCGCACTATTGGCCGTGCCATGTGGACACCCAGACGTGCCT +
Preference number: 5 (lower is better)
Translates to: GAAGHGRAFSRPGSA*CALLAVPCGHPDVP
Trigger: AGGCACGTCTGGGTGTCCACATGGCACGGCCAATAGTGCGCAGCATGCAGAGCCGGGCCGGGAGAAGGCCCGGCCATGCCCAGCTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp AGGCCTGTGCTTTATTGTGGGTCAATCTCGGGGGACGCGGCGGCCAGCAGGGGCGGCCCCCGGCCTGGTTaGGACTGCGCCTTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: RPVLYCGSISGDAAASRGGPRPG*DCALQP
Trigger: CGGCTGCAAGGCGCAGTCCAAACCAGGCCGGGGGCC...GCCCCTGCTGGCCGCCGCGTCCCCCGAGATTGACCCACAATAAAGCACAGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 90 bp GCAGCTGGGCATGGCCGGGCCTTCTCCCGGCCCGGCTCTGCATGCTaGGCACTATTGGCCGTGCCATGTGGACACCCAGACGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: AAGHGRAFSRPGSAC*ALLAVPCGHPDVPS
Trigger: GGAAGGCACGTCTGGGTGTCCACATGGCACGGCCAATAGTGCGCAGCATGCAGAGCCGGGCCGGGAGAAGGCCCGGCCATGCCCAGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CCA 90 bp TCCGGTACATCTGGTGCGCCTCGTAGTAGTCGCCCTTCTCGACGCTaGCGCGCAGCTTGCCCTCCACACGCTGGACGCCGCCGCGGTTGC +
Preference number: 5 (lower is better)
Translates to: SGTSGAPRSSRPSRR*RAACPPHAGRRRGC
Trigger: GCAACCGCGGCGGCGTCCAGCGTGTGGAGGGCAAGCTGCGCGCCAGCGTCGAGAAGGGCGACTACTACGAGGCGCACCAGATGTACCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS-3UTR CAA 90 bp GGGCCCTGGCTGGGCTCTCAGGTCCGAGGGCCAGCACCTGCTTTGGTGACCGCACGGTCGAGGTACTCGTaGTACATGGGGTCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: GPWLGSQVRGPAPALVTARSRYS*YMGSRR
Trigger: CCGGCGGGACCCCATGTACAACGAGTACCTCGACCG...TGCGGTCACCAAAGCAGGTGCTGGCCCTCGGACCTGAGAGCCCAGCCAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR CAA 90 bp GCCACCCTGAGCCGCCGCACAGAAACAGACACGCGCCGGCATGCGGCCACCGCCAACAGCCGCTCCCATTaGCAGACCACATGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: ATLSRRTETDTRRHAATANSRSH*QTTWAL
Trigger: CAGGGCCCATGTGGTCTGCAAATGGGAGCGGCTGTT...GGCGGTGGCCGCATGCCGGCGCGTGTCTGTTTCTGTGCGGCGGCTCAGGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS CCA 90 bp GCATCATGCTCGCCCTGCATCACGTCCCCACTCCCAGAGCACCGCTaGCAGGGAAAGCTGGAGCTCCTCAGGCCGCACGGGGACAGAGGC +
Preference number: 5 (lower is better)
Translates to: ASCSPCITSPLPEHR*QGKLELLRPHGDRG
Trigger: GCCTCTGTCCCCGTGCGGCCTGAGGAGCTCCAGCTTTCCCTGCCAGCGGTGCTCTGGGAGTGGGGACGTGATGCAGGGCGAGCATGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CCA 90 bp GGCAGGCCGGGCGGCGTCAACAGAGAAGCGGTTTCACCCTCAGCCTaGACCCTCGGTGAGAGGAACGCCAGCGACTTCCTACGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: GRPGGVNREAVSPSA*TLGERNASDFLRSP
Trigger: CGGGCTCCGTAGGAAGTCGCTGGCGTTCCTCTCACCGAGGGTCCAGGCTGAGGGTGAAACCGCTTCTCTGTTGACGCCGCCCGGCCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412734.6
CDS-3UTR CAA 90 bp GGGCCCTGGCTGGGCTCTCAGGTCCGAGGGCCAGCACCTGCTTTGGTGACCGCATACTCCACCAGCATGTaGGCACAGCCCTCCCCGTCC +
Preference number: 5 (lower is better)
Translates to: GPWLGSQVRGPAPALVTAYSTSM*AQPSPS
Trigger: GGACGGGGAGGGCTGTGCCAACATGCTGGTGGAGTA...TGCGGTCACCAAAGCAGGTGCTGGCCCTCGGACCTGAGAGCCCAGCCAGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS TCA 90 bp TACACCGGCCGTGCAGGTGTCACCGAGCCTAGGTCCAGAGGCGGCTaGCTCGGTTCGGCAGGCCGGGCGGCGTCAACAGAGAAGCGGTTT +
Preference number: 5 (lower is better)
Translates to: YTGRAGVTEPRSRGG*LGSAGRAASTEKRF
Trigger: AAACCGCTTCTCTGTTGACGCCGCCCGGCCTGCCGAACCGAGTCAGCCGCCTCTGGACCTAGGCTCGGTGACACCTGCACGGCCGGTGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412734.6
CDS GCA 90 bp GTCACAGTCCCGAGGGGCGTGCAGTTAACCCAGCATAGCCAGCTCTaGTCGCGCTCGCCCTCCAGGCTACACCGGCCGTGCAGGTGTCAC +
Preference number: 5 (lower is better)
Translates to: VTVPRGVQLTQHSQL*SRSPSRLHRPCRCH
Trigger: GTGACACCTGCACGGCCGGTGTAGCCTGGAGGGCGAGCGCGAGCAGAGCTGGCTATGCTGGGTTAACTGCACGCCCCTCGGGACTGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412734.6
CDS CCA 90 bp CTCAGGCCGCACGGGGACAGAGGCACGGGGTGGCGAGAGGTATGGTaGGGACCAGCGCGTGACAGACGATGTGGAGAGAAGCCGAGATGG +
Preference number: 5 (lower is better)
Translates to: LRPHGDRGTGWREVW*GPARDRRCGEKPRW
Trigger: CCATCTCGGCTTCTCTCCACATCGTCTGTCACGCGCTGGTCCCCACCATACCTCTCGCCACCCCGTGCCTCTGTCCCCGTGCGGCCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp GATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCCGGTCGAGGTACTCGTaGTACATGGGGTCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: DATWDTAASTRRHRPAARRSRYS*YMGSRR
Trigger: CCGGCGGGACCCCATGTACAACGAGTACCTCGACCG...GCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR CAA 90 bp CGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGGGCAGGCCTCCGGTTTaGCTGTGCTCCCCGCACAGT +
Preference number: 5 (lower is better)
Translates to: RALRLRRGPVRPDCRMTPGRPPV*LCSPHS
Trigger: ACTGTGCGGGGAGCACAGCAAAACCGGAGGCCTGCC...CGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp GCCACCCAGGACTCGCCTCTGAAACGTCCCTCCAGCCGTCGTCGACCGTGGTGTTCAGCCTGCAGGCCGTaGGCAGGCCTCCGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: ATQDSPLKRPSSRRRPWCSACRP*AGLRFC
Trigger: GCAAAACCGGAGGCCTGCCAACGGCCTGCAGGCTGA...ACACCACGGTCGACGACGGCTGGAGGGACGTTTCAGAGGCGAGTCCTGGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp ATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGGGAGGCAGCCTCTGCTaGGATGCGCTGCACCTCCCA +
Preference number: 5 (lower is better)
Translates to: MPHGTQLQVPVGTVPPHAGGSLC*DALHLP
Trigger: TGGGAGGTGCAGCGCATCCAAGCAGAGGCTGCCTCC...CGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp ACATGGGCCCTGGCTGGGCTCTCAGGTCCGAGGGCCAGCACCTGCTTTGGTGACGTCTGGGGTGCCCCGTaGCATCATGCTCGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: TWALAGLSGPRASTCFGDVWGAP*HHARPA
Trigger: TGCAGGGCGAGCATGATGCAACGGGGCACCCCAGAC...GTCACCAAAGCAGGTGCTGGCCCTCGGACCTGAGAGCCCAGCCAGGGCCCATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS TCA 90 bp CGGCGTCAACAGAGAAGCGGTTTCACCCTCAGCCTGGACCCTCGGTaGGAGGAACGCCAGCGACTTCCTACGGAGCCCGGTGTAGGGCCC +
Preference number: 5 (lower is better)
Translates to: RRQQRSGFTLSLDPR*EERQRLPTEPGVGP
Trigger: GGGCCCTACACCGGGCTCCGTAGGAAGTCGCTGGCGTTCCTCTCACCGAGGGTCCAGGCTGAGGGTGAAACCGCTTCTCTGTTGACGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412734.6
CDS GCA 90 bp TTGGGCGGGACGCCGAAGAACAGCTGTCCTATGCGGTCGAGGTACTaGAAGGCACAGGCAGCGGGCTCAGAGGGGGTGGACCCAGACCGT +
Preference number: 5 (lower is better)
Translates to: LGGTPKNSCPMRSRY*KAQAAGSEGVDPDR
Trigger: ACGGTCTGGGTCCACCCCCTCTGAGCCCGCTGCCTGTGCCTTGCAGTACCTCGACCGCATAGGACAGCTGTTCTTCGGCGTCCCGCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464468.1
CDS CCA 90 bp TCCCTGGAAGGCAGTGACCCATATTCCTGCACGAGGAGCCTGCTCTaGGGGGCACTGCCGATGGTCACGGCCCCCGGCCTGGTTTGGACT +
Preference number: 5 (lower is better)
Translates to: SLEGSDPYSCTRSLL*GALPMVTAPGLVWT
Trigger: AGTCCAAACCAGGCCGGGGGCCGTGACCATCGGCAGTGCCCCCCAGAGCAGGCTCCTCGTGCAGGAATATGGGTCACTGCCTTCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CCA 90 bp CGTCTGGCACAGGGCACTCTGGAAAAACAAGCTCCCAGACACGCCTaGCCTCACGATGCCGCCAGTGGGGCCACGGGCAGAACCGCATGC +
Preference number: 5 (lower is better)
Translates to: RLAQGTLEKQAPRHA*PHDAASGATGRTAC
Trigger: GCATGCGGTTCTGCCCGTGGCCCCACTGGCGGCATCGTGAGGCCAGGCGTGTCTGGGAGCTTGTTTTTCCAGAGTGCCCTGTGCCAGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407192.5
ENST00000441491.1
CDS-3UTR CAA 90 bp ATGCCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGCGGGCCTCCGTGTGCTaGCTCTGGGACATGTACCTG +
Preference number: 5 (lower is better)
Translates to: MPHGTQLQVPVGTVPPHARASVC*LWDMYL
Trigger: CAGGTACATGTCCCAGAGCAAGCACACGGAGGCCCG...CGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS GCA 90 bp AGGAAGACGTCTGCTTGGGCGGGACGCCGAAGAACAGCTGTCCTATaGGGTCGAGGTACTGCAAGGCACAGGCAGCGGGCTCAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: RKTSAWAGRRRTAVL*GRGTARHRQRAQRG
Trigger: CCCCCTCTGAGCCCGCTGCCTGTGCCTTGCAGTACCTCGACCGCATAGGACAGCTGTTCTTCGGCGTCCCGCCCAAGCAGACGTCTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464468.1
CDS CCA 90 bp GTTTGGACTGCGCCTTGCAGCCGGCTCCCTTCTTCCCTGGGCAGCTaGGAGCCGGGCAAGGGGAAAAAGGACGGGAGGAGAATTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VWTAPCSRLPSSLGS*EPGKGKKDGRRILG
Trigger: GCCCAGAATTCTCCTCCCGTCCTTTTTCCCCTTGCCCGGCTCCCAGCTGCCCAGGGAAGAAGGGAGCCGGCTGCAAGGCGCAGTCCAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CCA 90 bp TGGTGGGGACCAGCGCGTGACAGACGATGTGGAGAGAAGCCGAGATaGCCGCACTGCTGTAAGCAGCAGAGCCCCTGCCTGCGAGAGCAG +
Preference number: 5 (lower is better)
Translates to: WWGPARDRRCGEKPR*PHCCKQQSPCLREQ
Trigger: CTGCTCTCGCAGGCAGGGGCTCTGCTGCTTACAGCAGTGCGGCCATCTCGGCTTCTCTCCACATCGTCTGTCACGCGCTGGTCCCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS TCA 90 bp CGATGCCGCCAGTGGGGCCACGGGCAGAACCGCATGCACCGACCCTaGGCAAGCACCACACCAGCTTCTGCTTTGCCGATACTACAGCGT +
Preference number: 5 (lower is better)
Translates to: RCRQWGHGQNRMHRP*ASTTPASALPILQR
Trigger: ACGCTGTAGTATCGGCAAAGCAGAAGCTGGTGTGGTGCTTGCTCAGGGTCGGTGCATGCGGTTCTGCCCGTGGCCCCACTGGCGGCATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407192.5
ENST00000441491.1
CDS GCA 90 bp GGGCCTTCTCCCGGCCCGGCTCTGCATGCTGCGCACTATTGGCCGTaGCATGTGGACACCCAGACGTGCCTTCCAGATAGGGAAATGGCT +
Preference number: 5 (lower is better)
Translates to: GPSPGPALHAAHYWP*HVDTQTCLPDREMA
Trigger: AGCCATTTCCCTATCTGGAAGGCACGTCTGGGTGTCCACATGGCACGGCCAATAGTGCGCAGCATGCAGAGCCGGGCCGGGAGAAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp CCTCCACCGAGCGTGAGGATGTGGCGCAGGGCACGTGCACTCCGTCTGCGACGGAAGGCCTGTGCTTTATaGTGGGTCAATCTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: PPPSVRMWRRARALRLRRKACAL*WVNLGG
Trigger: TCCCCCGAGATTGACCCACAATAAAGCACAGGCCTT...CCGTCGCAGACGGAGTGCACGTGCCCTGCGCCACATCCTCACGCTCGGTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR CAA 90 bp GGGCCCTGGCTGGGCTCTCAGGTCCGAGGGCCAGCACCTGCTTTGGTGACCGCAAAGGCCTGTGCTTTATaGTGGGTCAATCTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: GPWLGSQVRGPAPALVTAKACAL*WVNLGG
Trigger: TCCCCCGAGATTGACCCACAATAAAGCACAGGCCTT...TGCGGTCACCAAAGCAGGTGCTGGCCCTCGGACCTGAGAGCCCAGCCAGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR CAA 90 bp CGCAGGGCACGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAAGGACCAGAATGACCTaGGTGTTGCCAGGACGGGAA +
Preference number: 5 (lower is better)
Translates to: RRARALRLRRGPVRPDCRRTRMT*VLPGRE
Trigger: TTCCCGTCCTGGCAACACCAAGGTCATTCTGGTCCT...TCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACGTGCCCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CCA 90 bp CTCCCGGCCCGGCTCTGCATGCTGCGCACTATTGGCCGTGCCATGTaGACACCCAGACGTGCCTTCCAGATAGGGAAATGGCTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: LPARLCMLRTIGRAM*TPRRAFQIGKWLLP
Trigger: AGGCAGAAGCCATTTCCCTATCTGGAAGGCACGTCTGGGTGTCCACATGGCACGGCCAATAGTGCGCAGCATGCAGAGCCGGGCCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CCA 90 bp GCCCCAAGCTCTCACCTCGTTGTACATGGGGTCCCGCCGGAGGGATaGCTGGTACTGCTCACACAGCACAGTGAACACCGTCAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: APSSHLVVHGVPPEG*LVLLTQHSEHRQLP
Trigger: GGGAAGCTGACGGTGTTCACTGTGCTGTGTGAGCAGTACCAGCCATCCCTCCGGCGGGACCCCATGTACAACGAGGTGAGAGCTTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464468.1
CDS-3UTR CAA 90 bp CCACATGGGACACAGCTGCAAGTACCCGTAGGCACCGTCCCGCCGCACGCGTCCGTCTGCTGCACTGTTTaGCTGGCCATGGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: PHGTQLQVPVGTVPPHASVCCTV*LAMAEE
Trigger: TTCTTCAGCCATGGCCAGCAAAACAGTGCAGCAGAC...GGACGCGTGCGGCGGGACGGTGCCTACGGGTACTTGCAGCTGTGTCCCATGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR CAA 90 bp CTCCTGTGCTGCCCATCAGCCCTCCCGAAAGGACCCAGAACAAAGGAGTGGGAGTACTCCACCAGCATGTaGGCACAGCCCTCCCCGTCC +
Preference number: 5 (lower is better)
Translates to: LLCCPSALPKGPRTKEWEYSTSM*AQPSPS
Trigger: GGACGGGGAGGGCTGTGCCAACATGCTGGTGGAGTA...CTCCCACTCCTTTGTTCTGGGTCCTTTCGGGAGGGCTGATGGGCAGCACAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS GCA 90 bp AGCAGCAGGCGTGGAGGGCAGGAGGCAGCCTCTGCTTGGATGCGCTaGACCTCCCAGTCCAGTGGTGGGGCCCAGAACATGTTATTTCAT +
Preference number: 5 (lower is better)
Translates to: SSRRGGQEAASAWMR*TSQSSGGAQNMLFH
Trigger: ATGAAATAACATGTTCTGGGCCCCACCACTGGACTGGGAGGTGCAGCGCATCCAAGCAGAGGCTGCCTCCTGCCCTCCACGCCTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 90 bp AAGAAGAGCAGGGCTCCCGAGTACATGAGCTCCCGGGCCTCCGTGTaGTTGCTCTGGGACATGTACCTGCCACAGAGAGGAGACCGTGAG +
Preference number: 5 (lower is better)
Translates to: KKSRAPEYMSSRASV*LLWDMYLPQRGDRE
Trigger: CTCACGGTCTCCTCTCTGTGGCAGGTACATGTCCCAGAGCAAGCACACGGAGGCCCGGGAGCTCATGTACTCGGGAGCCCTGCTCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 90 bp CTCACCTCGTTGTACATGGGGTCCCGCCGGAGGGATGGCTGGTACTaGTCACACAGCACAGTGAACACCGTCAGCTTCCCACCGTCCACA +
Preference number: 5 (lower is better)
Translates to: LTSLYMGSRRRDGWY*SHSTVNTVSFPPST
Trigger: TGTGGACGGTGGGAAGCTGACGGTGTTCACTGTGCTGTGTGAGCAGTACCAGCCATCCCTCCGGCGGGACCCCATGTACAACGAGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464468.1
CDS CCA 90 bp CAAGCTCTCACCTCGTTGTACATGGGGTCCCGCCGGAGGGATGGCTaGTACTGCTCACACAGCACAGTGAACACCGTCAGCTTCCCACCG +
Preference number: 5 (lower is better)
Translates to: QALTSLYMGSRRRDG*YCSHSTVNTVSFPP
Trigger: CGGTGGGAAGCTGACGGTGTTCACTGTGCTGTGTGAGCAGTACCAGCCATCCCTCCGGCGGGACCCCATGTACAACGAGGTGAGAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464468.1
CDS-3UTR CAA 90 bp GCCACCCAGGACTCGCCTCTGAAACGTCCCTCCAGCCGTCGTCGACCGTGGTGTGTCTGCTGCACTGTTTaGCTGGCCATGGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: ATQDSPLKRPSSRRRPWCVCCTV*LAMAEE
Trigger: TTCTTCAGCCATGGCCAGCAAAACAGTGCAGCAGAC...ACACCACGGTCGACGACGGCTGGAGGGACGTTTCAGAGGCGAGTCCTGGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR CAA 90 bp GGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAAACAGCCGCTCCCGGTTTGGACTGCGCCTaGCAGCCGGCTCCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GPVRPDCRMTPCSKTAAPGLDCA*QPAPFF
Trigger: GAAGAAGGGAGCCGGCTGCAAGGCGCAGTCCAAACC...GGGAGCGGCTGTTTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp CGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAAACGCGCTCAGGAGAGTaGGGGTCCATCAGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: RLRRGPVRPDCRMTPCSKTRSGE*GSIRLN
Trigger: GTTCAGCCTGATGGACCCCAACTCTCCTGAGCGCGT...TTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR CAA 90 bp GGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAAACAGCCGCTCCCGCATGCTGCGCACTATaGGCCGTGCCATGTGGACAC +
Preference number: 5 (lower is better)
Translates to: GPVRPDCRMTPCSKTAAPACCAL*AVPCGH
Trigger: GTGTCCACATGGCACGGCCAATAGTGCGCAGCATGC...GGGAGCGGCTGTTTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp GCCGCGGTAAGGCCTGTGCTTTATTGTGGGTCAATCTCGGGGGACGCGGCGGCCCGACTCACAATAGTTTaGTTCTTTCCACAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: AAVRPVLYCGSISGDAAARLTIV*FFPQGE
Trigger: CTCACCCTGTGGAAAGAACAAAACTATTGTGAGTCG...GGCCGCCGCGTCCCCCGAGATTGACCCACAATAAAGCACAGGCCTTACCGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS GCA 90 bp GTGTTGCCAGGACGGGAAGGCCAGCCGAGAACGCAAAGGGTTGGATaGTCAGTTAACCACAGAAAAGGGCTCCTCTTCAGAAGGCACCAC +
Preference number: 5 (lower is better)
Translates to: VLPGREGQPRTQRVG*SVNHRKGLLFRRHH
Trigger: GTGGTGCCTTCTGAAGAGGAGCCCTTTTCTGTGGTTAACTGAGCATCCAACCCTTTGCGTTCTCGGCTGGCCTTCCCGTCCTGGCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp CCTTTTGTCATCGTTCTGGTAACATTTGGAGTAGCATCTGACAGAACGGAGCTGACGCTGGCGCGCAGCTaGCCCTCCACACGCTGGACG +
Preference number: 5 (lower is better)
Translates to: PFVIVLVTFGVASDRTELTLARS*PSTRWT
Trigger: CGTCCAGCGTGTGGAGGGCAAGCTGCGCGCCAGCGT...CAGCTCCGTTCTGTCAGATGCTACTCCAAATGTTACCAGAACGATGACAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS CCA 90 bp GCAGGAGGCAGCCTCTGCTTGGATGCGCTGCACCTCCCAGTCCAGTaGTGGGGCCCAGAACATGTTATTTCATTGGCTACACGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: AGGSLCLDALHLPVQ*WGPEHVISLATRFS
Trigger: AGAAAAACGTGTAGCCAATGAAATAACATGTTCTGGGCCCCACCACTGGACTGGGAGGTGCAGCGCATCCAAGCAGAGGCTGCCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp CGTGCACTCCGTCTGCGACGGGGACCGGTTCGTCCTGACTGCAGAATGACCCCGTCCTGGACCGGTTATTaGGTTAAAACCCAAAATGTT +
Preference number: 5 (lower is better)
Translates to: RALRLRRGPVRPDCRMTPSWTGY*VKTQNV
Trigger: AACATTTTGGGTTTTAACCAAATAACCGGTCCAGGA...CGGGGTCATTCTGCAGTCAGGACGAACCGGTCCCCGTCGCAGACGGAGTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR CAA 90 bp CCTTTTGTCATCGTTCTGGTAACATTTGGAGTAGCATCTGACAGAACGGAGCTGCGGGCCTCCGTGTGCTaGCTCTGGGACATGTACCTG +
Preference number: 5 (lower is better)
Translates to: PFVIVLVTFGVASDRTELRASVC*LWDMYL
Trigger: CAGGTACATGTCCCAGAGCAAGCACACGGAGGCCCG...CAGCTCCGTTCTGTCAGATGCTACTCCAAATGTTACCAGAACGATGACAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR CAA 90 bp GGACCGGTTCGTCCTGACTGCAGAATGACCCCGTGTTCAAAAACAGCCGCTCCCGCGAGCCAAATGTCCTaGGACAAAGCCTTGTTTAAA +
Preference number: 5 (lower is better)
Translates to: GPVRPDCRMTPCSKTAAPASQMS*DKALFK
Trigger: TTTAAACAAGGCTTTGTCCAAGGACATTTGGCTCGC...GGGAGCGGCTGTTTTTGAACACGGGGTCATTCTGCAGTCAGGACGAACCGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp TCCCCTTCCCATGCACAACTGCGTATCAATCTACAACTGTCATTTAACTGTGAAACGCGCTCAGGAGAGTaGGGGTCCATCAGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: SPSHAQLRINLQLSFNCETRSGE*GSIRLN
Trigger: GTTCAGCCTGATGGACCCCAACTCTCCTGAGCGCGT...TTCACAGTTAAATGACAGTTGTAGATTGATACGCAGTTGTGCATGGGAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR CAA 90 bp GTAGAAAGGGTTTATTTATGCGCAACGGTTCACACAAGCCTTCCTGAAATTCCAAACAGCCGCTCCCATTaGCAGACCACATGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: VERVYLCATVHTSLPEIPNSRSH*QTTWAL
Trigger: CAGGGCCCATGTGGTCTGCAAATGGGAGCGGCTGTT...TGGAATTTCAGGAAGGCTTGTGTGAACCGTTGCGCATAAATAAACCCTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR CAA 90 bp GTCCCACGGTATCCCTTTTTAAAGCGGCATTTCCAGCACAGCAGCGTGGCGCTCTCCTGGACCGGTTATTaGGTTAAAACCCAAAATGTT +
Preference number: 5 (lower is better)
Translates to: VPRYPFLKRHFQHSSVALSWTGY*VKTQNV
Trigger: AACATTTTGGGTTTTAACCAAATAACCGGTCCAGGA...GAGCGCCACGCTGCTGTGCTGGAAATGCCGCTTTAAAAAGGGATACCGTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS-3UTR CAA 90 bp GTAGAAAGGGTTTATTTATGCGCAACGGTTCACACAAGCCTTCCTGAAATTCCAAGGTGGGAGGACTGCTaGAGTCCGGGTAGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: VERVYLCATVHTSLPEIPRWEDC*SPGSQG
Trigger: GCCTTGACTACCCGGACTCAAGCAGTCCTCCCACCT...TGGAATTTCAGGAAGGCTTGTGTGAACCGTTGCGCATAAATAAACCCTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp GTAGCATCTGACAGAACGGAGCTGCTCACTCCTGGACCGGTTATTTGGTTAAAAACACCAGCTTCTGCTTaGCCGATACTACAGCGTTCT +
Preference number: 5 (lower is better)
Translates to: VASDRTELLTPGPVIWLKTPASA*PILQRS
Trigger: AGAACGCTGTAGTATCGGCAAAGCAGAAGCTGGTGT...TTTTAACCAAATAACCGGTCCAGGAGTGAGCAGCTCCGTTCTGTCAGATGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS-3UTR CAA 90 bp TCCCCTTCCCATGCACAACTGCGTATCAATCTACAACTGTCATTTAACTGTGAACGACTCACAATAGTTTaGTTCTTTCCACAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: SPSHAQLRINLQLSFNCERLTIV*FFPQGE
Trigger: CTCACCCTGTGGAAAGAACAAAACTATTGTGAGTCG...TTCACAGTTAAATGACAGTTGTAGATTGATACGCAGTTGTGCATGGGAAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265857.8
ENST00000407192.5
CDS CAA 90 bp ACGCTGGCGCGCAGCTTGCCCTCCACACGCTGGACGCCGCCGCGGTaGCGGCCGCCGTTCCGGGCGCTCTCCTGCTCGGCCATCGCCGCC +
Preference number: 6 (lower is better)
Translates to: TLARSLPSTRWTPPR*RPPFRALSCSAIAA
Trigger: GGCGGCGATGGCCGAGCAGGAGAGCGCCCGGAACGGCGGCCGCAACCGCGGCGGCGTCCAGCGTGTGGAGGGCAAGCTGCGCGCCAGCGT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS GCA 72 bp GCAGCTTGCCCTCCACACGCTGGACGCCGCCGCGGTTaGGGCCGCCGTTCCGGGCGCTCTCCTGCTCGGCCA +
Preference number: 6 (lower is better)
Translates to: AACPPHAGRRRG*GRRSGRSPARP
Trigger: TGGCCGAGCAGGAGAGCGCCCGGAACGGCGGCCGCAACCGCGGCGGCGTCCAGCGTGTGGAGGGCAAGCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS CCA 72 bp TTCTCGACGCTGGCGCGCAGCTTGCCCTCCACACGCTaGACGCCGCCGCGGTTGCGGCCGCCGTTCCGGGCG +
Preference number: 6 (lower is better)
Translates to: FSTLARSLPSTR*TPPRLRPPFRA
Trigger: CGCCCGGAACGGCGGCCGCAACCGCGGCGGCGTCCAGCGTGTGGAGGGCAAGCTGCGCGCCAGCGTCGAGAA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS GCA 72 bp CGTAGTAGTCGCCCTTCTCGACGCTGGCGCGCAGCTTaGCCTCCACACGCTGGACGCCGCCGCGGTTGCGGC +
Preference number: 6 (lower is better)
Translates to: RSSRPSRRWRAA*PPHAGRRRGCG
Trigger: GCCGCAACCGCGGCGGCGTCCAGCGTGTGGAGGGCAAGCTGCGCGCCAGCGTCGAGAAGGGCGACTACTACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265857.8
CDS CAA 90 bp GGCACTGCCGATGGTCACGGCCCCCGGCCTGGTTTGGACTGCGCCTaGCAGCCGGCTCCCTTCTTCCCTGGGCAGCTGGGAGCCGGGCAA +
Preference number: 6 (lower is better)
Translates to: GTADGHGPRPGLDCA*QPAPFFPGQLGAGQ
Trigger: TTGCCCGGCTCCCAGCTGCCCAGGGAAGAAGGGAGCCGGCTGCAAGGCGCAGTCCAAACCAGGCCGGGGGCCGTGACCATCGGCAGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS TCA 72 bp CGTGCAGGTGTCACCGAGCCTAGGTCCAGAGGCGGCTaGCTCGGTTCGGCAGGCCGGGCGGCGTCAACAGAG +
Preference number: 6 (lower is better)
Translates to: RAGVTEPRSRGG*LGSAGRAASTE
Trigger: CTCTGTTGACGCCGCCCGGCCTGCCGAACCGAGTCAGCCGCCTCTGGACCTAGGCTCGGTGACACCTGCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412734.6
CDS GCA 72 bp GGGCATGGCCGGGCCTTCTCCCGGCCCGGCTCTGCATaGTGCGCACTATTGGCCGTGCCATGTGGACACCCA +
Preference number: 6 (lower is better)
Translates to: GHGRAFSRPGSA*CALLAVPCGHP
Trigger: TGGGTGTCCACATGGCACGGCCAATAGTGCGCAGCATGCAGAGCCGGGCCGGGAGAAGGCCCGGCCATGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 72 bp ACTGCCGATGGTCACGGCCCCCGGCCTGGTTTGGACTaGGCCTTGCAGCCGGCTCCCTTCTTCCCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: TADGHGPRPGLD*ALQPAPFFPGQ
Trigger: CTGCCCAGGGAAGAAGGGAGCCGGCTGCAAGGCGCAGTCCAAACCAGGCCGGGGGCCGTGACCATCGGCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 72 bp GCAGGCGTGGAGGGCAGGAGGCAGCCTCTGCTTGGATaGGCTGCACCTCCCAGTCCAGTGGTGGGGCCCAGA +
Preference number: 6 (lower is better)
Translates to: AGVEGRRQPLLG*AAPPSPVVGPR
Trigger: TCTGGGCCCCACCACTGGACTGGGAGGTGCAGCGCATCCAAGCAGAGGCTGCCTCCTGCCCTCCACGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 72 bp CCGAGGGGCGTGCAGTTAACCCAGCATAGCCAGCTCTaGTCGCGCTCGCCCTCCAGGCTACACCGGCCGTGC +
Preference number: 6 (lower is better)
Translates to: PRGVQLTQHSQL*SRSPSRLHRPC
Trigger: GCACGGCCGGTGTAGCCTGGAGGGCGAGCGCGAGCAGAGCTGGCTATGCTGGGTTAACTGCACGCCCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412734.6
CDS CCA 72 bp TCGCCCTGCATCACGTCCCCACTCCCAGAGCACCGCTaGCAGGGAAAGCTGGAGCTCCTCAGGCCGCACGGG +
Preference number: 6 (lower is better)
Translates to: SPCITSPLPEHR*QGKLELLRPHG
Trigger: CCCGTGCGGCCTGAGGAGCTCCAGCTTTCCCTGCCAGCGGTGCTCTGGGAGTGGGGACGTGATGCAGGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 72 bp GCGTCCCTGAGTGAGCCGTGGACCACCACACTGAGCTaGCCACCGCAGTTCCAGCGCCATGTGCCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: ASLSEPWTTTLS*PPQFQRHVPQS
Trigger: GCTCTGGGGCACATGGCGCTGGAACTGCGGTGGGCAGCTCAGTGTGGTGGTCCACGGCTCACTCAGGGACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426056.1
CDS CCA 72 bp GCGCCTTGCAGCCGGCTCCCTTCTTCCCTGGGCAGCTaGGAGCCGGGCAAGGGGAAAAAGGACGGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: APCSRLPSSLGS*EPGKGKKDGRR
Trigger: TCTCCTCCCGTCCTTTTTCCCCTTGCCCGGCTCCCAGCTGCCCAGGGAAGAAGGGAGCCGGCTGCAAGGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS TCA 72 bp CCGGCCGTCCTAGTTCCAGTCCTGCAGGGACATGACTaGCTCAGAGGAGGCCGGGAGCCGTCTGGCACAGGG +
Preference number: 6 (lower is better)
Translates to: PAVLVPVLQGHD*LRGGREPSGTG
Trigger: CCCTGTGCCAGACGGCTCCCGGCCTCCTCTGAGTCAGTCATGTCCCTGCAGGACTGGAACTAGGACGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407192.5
ENST00000441491.1
CDS GCA 72 bp CACGATGCCGCCAGTGGGGCCACGGGCAGAACCGCATaGACCGACCCTGAGCAAGCACCACACCAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: HDAASGATGRTA*TDPEQAPHQLL
Trigger: CAGAAGCTGGTGTGGTGCTTGCTCAGGGTCGGTGCATGCGGTTCTGCCCGTGGCCCCACTGGCGGCATCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407192.5
ENST00000441491.1
CDS CAA 72 bp GCCTTCTCCCGGCCCGGCTCTGCATGCTGCGCACTATaGGCCGTGCCATGTGGACACCCAGACGTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: AFSRPGSACCAL*AVPCGHPDVPS
Trigger: GGAAGGCACGTCTGGGTGTCCACATGGCACGGCCAATAGTGCGCAGCATGCAGAGCCGGGCCGGGAGAAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CAA 72 bp CCCGTCAGCCTGCAGGCCGTTGGCAGGCCTCCGGTTTaGCTGTGCTCCCCGCACAGTGAAGGTTCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: PVSLQAVGRPPV*LCSPHSEGSGG
Trigger: CCCTCCAGAACCTTCACTGTGCGGGGAGCACAGCAAAACCGGAGGCCTGCCAACGGCCTGCAGGCTGACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 72 bp CCCGGCCCGGCTCTGCATGCTGCGCACTATTGGCCGTaGCATGTGGACACCCAGACGTGCCTTCCAGATAGG +
Preference number: 6 (lower is better)
Translates to: PGPALHAAHYWP*HVDTQTCLPDR
Trigger: CCTATCTGGAAGGCACGTCTGGGTGTCCACATGGCACGGCCAATAGTGCGCAGCATGCAGAGCCGGGCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 72 bp GGAAAAACAAGCTCCCAGACACGCCTGGCCTCACGATaGCGCCAGTGGGGCCACGGGCAGAACCGCATGCAC +
Preference number: 6 (lower is better)
Translates to: GKTSSQTRLASR*RQWGHGQNRMH
Trigger: GTGCATGCGGTTCTGCCCGTGGCCCCACTGGCGGCATCGTGAGGCCAGGCGTGTCTGGGAGCTTGTTTTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407192.5
ENST00000441491.1
CDS GCA 72 bp AGCCTGCAGGCCGTTGGCAGGCCTCCGGTTTTGCTGTaGTCCCCGCACAGTGAAGGTTCTGGAGGGAGACCC +
Preference number: 6 (lower is better)
Translates to: SLQAVGRPPVLL*SPHSEGSGGRP
Trigger: GGGTCTCCCTCCAGAACCTTCACTGTGCGGGGAGCACAGCAAAACCGGAGGCCTGCCAACGGCCTGCAGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 72 bp CCGTCAGCCTGCAGGCCGTTGGCAGGCCTCCGGTTTTaGTGTGCTCCCCGCACAGTGAAGGTTCTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: PSACRPLAGLRF*CAPRTVKVLEG
Trigger: TCCCTCCAGAACCTTCACTGTGCGGGGAGCACAGCAAAACCGGAGGCCTGCCAACGGCCTGCAGGCTGACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CCA 72 bp CCTTCTCCCGGCCCGGCTCTGCATGCTGCGCACTATTaGCCGTGCCATGTGGACACCCAGACGTGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: PSPGPALHAAHY*PCHVDTQTCLP
Trigger: TGGAAGGCACGTCTGGGTGTCCACATGGCACGGCCAATAGTGCGCAGCATGCAGAGCCGGGCCGGGAGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CCA 72 bp CAGGGCACTCTGGAAAAACAAGCTCCCAGACACGCCTaGCCTCACGATGCCGCCAGTGGGGCCACGGGCAGA +
Preference number: 6 (lower is better)
Translates to: QGTLEKQAPRHA*PHDAASGATGR
Trigger: TCTGCCCGTGGCCCCACTGGCGGCATCGTGAGGCCAGGCGTGTCTGGGAGCTTGTTTTTCCAGAGTGCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407192.5
ENST00000441491.1
CDS CCA 72 bp CAGAGGAGGCCGGGAGCCGTCTGGCACAGGGCACTCTaGAAAAACAAGCTCCCAGACACGCCTGGCCTCACG +
Preference number: 6 (lower is better)
Translates to: QRRPGAVWHRAL*KNKLPDTPGLT
Trigger: CGTGAGGCCAGGCGTGTCTGGGAGCTTGTTTTTCCAGAGTGCCCTGTGCCAGACGGCTCCCGGCCTCCTCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407192.5
ENST00000441491.1
CDS CCA 72 bp TCCCTCCCCAGCCCCAAGCTCTCACCTCGTTGTACATaGGGTCCCGCCGGAGGGATGGCTGGTACTGCTCAC +
Preference number: 6 (lower is better)
Translates to: SLPSPKLSPRCT*GPAGGMAGTAH
Trigger: GTGAGCAGTACCAGCCATCCCTCCGGCGGGACCCCATGTACAACGAGGTGAGAGCTTGGGGCTGGGGAGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464468.1
CDS TCA 72 bp CAGAGAAGCGGTTTCACCCTCAGCCTGGACCCTCGGTaGGAGGAACGCCAGCGACTTCCTACGGAGCCCGGT +
Preference number: 6 (lower is better)
Translates to: QRSGFTLSLDPR*EERQRLPTEPG
Trigger: ACCGGGCTCCGTAGGAAGTCGCTGGCGTTCCTCTCACCGAGGGTCCAGGCTGAGGGTGAAACCGCTTCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412734.6
CDS GCA 72 bp ACGCCGAAGAACAGCTGTCCTATGCGGTCGAGGTACTaGAAGGCACAGGCAGCGGGCTCAGAGGGGGTGGAC +
Preference number: 6 (lower is better)
Translates to: TPKNSCPMRSRY*KAQAAGSEGVD
Trigger: GTCCACCCCCTCTGAGCCCGCTGCCTGTGCCTTGCAGTACCTCGACCGCATAGGACAGCTGTTCTTCGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464468.1
CDS GCA 72 bp TCTGCTTGGGCGGGACGCCGAAGAACAGCTGTCCTATaGGGTCGAGGTACTGCAAGGCACAGGCAGCGGGCT +
Preference number: 6 (lower is better)
Translates to: SAWAGRRRTAVL*GRGTARHRQRA
Trigger: AGCCCGCTGCCTGTGCCTTGCAGTACCTCGACCGCATAGGACAGCTGTTCTTCGGCGTCCCGCCCAAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464468.1
CDS CCA 72 bp CCAGCGCGTGACAGACGATGTGGAGAGAAGCCGAGATaGCCGCACTGCTGTAAGCAGCAGAGCCCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: PARDRRCGEKPR*PHCCKQQSPCL
Trigger: CAGGCAGGGGCTCTGCTGCTTACAGCAGTGCGGCCATCTCGGCTTCTCTCCACATCGTCTGTCACGCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CAA 90 bp AAGAGCAGGGCTCCCGAGTACATGAGCTCCCGGGCCTCCGTGTGCTaGCTCTGGGACATGTACCTGCCACAGAGAGGAGACCGTGAGCCA +
Preference number: 6 (lower is better)
Translates to: KSRAPEYMSSRASVC*LWDMYLPQRGDREP
Trigger: TGGCTCACGGTCTCCTCTCTGTGGCAGGTACATGTCCCAGAGCAAGCACACGGAGGCCCGGGAGCTCATGTACTCGGGAGCCCTGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 72 bp AGGGCTCCCGAGTACATGAGCTCCCGGGCCTCCGTGTaGTTGCTCTGGGACATGTACCTGCCACAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: RAPEYMSSRASV*LLWDMYLPQRG
Trigger: TCCTCTCTGTGGCAGGTACATGTCCCAGAGCAAGCACACGGAGGCCCGGGAGCTCATGTACTCGGGAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS GCA 72 bp AGGGCTCCCGAGTACATGAGCTCCCGGGCCTCCGTGTaGTTGCTCTGGGACATGTACCCCAACACCACAGCA +
Preference number: 6 (lower is better)
Translates to: RAPEYMSSRASV*LLWDMYPNTTA
Trigger: TGCTGTGGTGTTGGGGTACATGTCCCAGAGCAAGCACACGGAGGCCCGGGAGCTCATGTACTCGGGAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441491.1
CDS CCA 72 bp GGCGGCGTCAACAGAGAAGCGGTTTCACCCTCAGCCTaGACCCTCGGTGAGAGGAACGCCAGCGACTTCCTA +
Preference number: 6 (lower is better)
Translates to: GGVNREAVSPSA*TLGERNASDFL
Trigger: TAGGAAGTCGCTGGCGTTCCTCTCACCGAGGGTCCAGGCTGAGGGTGAAACCGCTTCTCTGTTGACGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412734.6
CDS TCA 72 bp ACCACAGCAGGAGCCTCGACAGGACCACTGACTCTGTaGCCGGCCGTCCTAGTTCCAGTCCTGCAGGGACAT +
Preference number: 6 (lower is better)
Translates to: TTAGASTGPLTL*PAVLVPVLQGH
Trigger: ATGTCCCTGCAGGACTGGAACTAGGACGGCCGGTCACAGAGTCAGTGGTCCTGTCGAGGCTCCTGCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407192.5
ENST00000441491.1
CDS CCA 72 bp ACCTCGTTGTACATGGGGTCCCGCCGGAGGGATGGCTaGTACTGCTCACACAGCACAGTGAACACCGTCAGC +
Preference number: 6 (lower is better)
Translates to: TSLYMGSRRRDG*YCSHSTVNTVS
Trigger: GCTGACGGTGTTCACTGTGCTGTGTGAGCAGTACCAGCCATCCCTCCGGCGGGACCCCATGTACAACGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464468.1
CDS CAA 72 bp AGAGCCACAGCAACGCCACTGAGGACCAGAATGACCTaGGTGTTGCCAGGACGGGAAGGCCAGCCGAGAACG +
Preference number: 6 (lower is better)
Translates to: RATATPLRTRMT*VLPGREGQPRT
Trigger: CGTTCTCGGCTGGCCTTCCCGTCCTGGCAACACCAAGGTCATTCTGGTCCTCAGTGGCGTTGCTGTGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CCA 72 bp CGGCTCTGCATGCTGCGCACTATTGGCCGTGCCATGTaGACACCCAGACGTGCCTTCCAGATAGGGAAATGG +
Preference number: 6 (lower is better)
Translates to: RLCMLRTIGRAM*TPRRAFQIGKW
Trigger: CCATTTCCCTATCTGGAAGGCACGTCTGGGTGTCCACATGGCACGGCCAATAGTGCGCAGCATGCAGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CCA 72 bp AGTCCTGAAGACAATCAACCAAGCCACGCAGCAGCCTaGAACTTCCAAGCGGTCACAGTCCCGAGGGGCGTG +
Preference number: 6 (lower is better)
Translates to: SPEDNQPSHAAA*NFQAVTVPRGV
Trigger: CACGCCCCTCGGGACTGTGACCGCTTGGAAGTTCCAGGCTGCTGCGTGGCTTGGTTGATTGTCTTCAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412734.6
CDS CCA 72 bp TCTCACCTCGTTGTACATGGGGTCCCGCCGGAGGGATaGCTGGTACTGCTCACACAGCACAGTGAACACCGT +
Preference number: 6 (lower is better)
Translates to: SHLVVHGVPPEG*LVLLTQHSEHR
Trigger: ACGGTGTTCACTGTGCTGTGTGAGCAGTACCAGCCATCCCTCCGGCGGGACCCCATGTACAACGAGGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464468.1
CDS GCA 72 bp AGGGCTCCCGAGTACATGAGCTCCCGGGCCTCCGTGTaGTTGCTCTGGGACATGTACAGAACAACTGAACAT +
Preference number: 6 (lower is better)
Translates to: RAPEYMSSRASV*LLWDMYRTTEH
Trigger: ATGTTCAGTTGTTCTGTACATGTCCCAGAGCAAGCACACGGAGGCCCGGGAGCTCATGTACTCGGGAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412734.6
CDS CAA 90 bp GACCACTTCAGGGCTCTGGACACAAAGGTCACGCGCTCAGGAGAGTaGGGGTCCATCAGGCTGAACACTTTAGCCAGATTTTCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: DHFRALDTKVTRSGE*GSIRLNTLARFSAG
Trigger: CCCAGCAGAAAATCTGGCTAAAGTGTTCAGCCTGATGGACCCCAACTCTCCTGAGCGCGTGACCTTTGTGTCCAGAGCCCTGAAGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426056.1
CDS GCA 72 bp GGACGGGAAGGCCAGCCGAGAACGCAAAGGGTTGGATaGTCAGTTAACCACAGAAAAGGGCTCCTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: GREGQPRTQRVG*SVNHRKGLLFR
Trigger: TCTGAAGAGGAGCCCTTTTCTGTGGTTAACTGAGCATCCAACCCTTTGCGTTCTCGGCTGGCCTTCCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CCA 72 bp GGCGGCTCTGAACGTGGACGGCTTCTCCTCCTGTACTaGAGAATTCTGGAAGCTGCGAAGGATTTTGGTTTC +
Preference number: 6 (lower is better)
Translates to: GGSERGRLLLLY*RILEAAKDFGF
Trigger: GAAACCAAAATCCTTCGCAGCTTCCAGAATTCTCCAGTACAGGAGGAGAAGCCGTCCACGTTCAGAGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407192.5
CDS CCA 72 bp CACACCAGCTTCTGCTTTGCCGATACTACAGCGTTCTaGATGCTTCTATCTGAGGTAAAGCAAGAGGTGGCG +
Preference number: 6 (lower is better)
Translates to: HTSFCFADTTAF*MLLSEVKQEVA
Trigger: CGCCACCTCTTGCTTTACCTCAGATAGAAGCATCCAGAACGCTGTAGTATCGGCAAAGCAGAAGCTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407192.5
ENST00000441491.1
CDS TCA 72 bp CTTTGCCGATACTACAGCGTTCTGGATGCTTCTATCTaGGGTAAAGCAAGAGGTGGCGACTTAGAAACCAGA +
Preference number: 6 (lower is better)
Translates to: LCRYYSVLDASI*GKARGGDLETR
Trigger: TCTGGTTTCTAAGTCGCCACCTCTTGCTTTACCTCAGATAGAAGCATCCAGAACGCTGTAGTATCGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407192.5
ENST00000441491.1
CDS CCA 72 bp CAGTCCAGTGGTGGGGCCCAGAACATGTTATTTCATTaGCTACACGTTTTTCTTAATGATCGCTGCCTTATT +
Preference number: 6 (lower is better)
Translates to: QSSGGAQNMLFH*LHVFLNDRCLI
Trigger: AATAAGGCAGCGATCATTAAGAAAAACGTGTAGCCAATGAAATAACATGTTCTGGGCCCCACCACTGGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407192.5