Pregenerated sensors for GEMIN2 (Homo sapiens)
Ensembl gene IDs: ENSG00000092208Ensembl transcript IDs: ENST00000524781.1, ENST00000525430.1, ENST00000650481.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAGAATTGCTTGAACCCAGGAGGTGAAGGTTGTAGTGAGCCGAGATGGTGCCATTACACCTGTAATCCCTaGACTTTCGGAGGCTTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: ENCLNPGGEGCSEPRWCHYTCNP*TFGGLG Trigger: ACCTAAGCCTCCGAAAGTGCAGGGATTACAGGTGTA...ATGGCACCATCTCGGCTCACTACAACCTTCACCTCCTGGGTTCAAGCAATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524781.1 |
||
| 3UTR-3UTR GCA 90 bp | GAGAATTGCTTGAACCCAGGAGGTGAAGGTTGTAGTGAGCCGAGATGGTGCCATGCAATTAAACAAAAATaGAGGCTGAATGCAGTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ENCLNPGGEGCSEPRWCHAIKQK*RLNAVA Trigger: AGCCACTGCATTCAGCCTGCATTTTTGTTTAATTGC...ATGGCACCATCTCGGCTCACTACAACCTTCACCTCCTGGGTTCAAGCAATTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524781.1 |
||
| CDS-3UTR GCA 90 bp | AGGATTGCTGGAGCCCAGGAAGTTAAAGCTCTAGTGAGCTGTGATTGCGCCACTAGCCAGGTGTGGTGGTaGTTGGTTGTGGTCCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RIAGAQEVKALVSCDCATSQVWW*LVVVLA Trigger: AGCTAGGACCACAACCAAGCACCACCACACCTGGCT...AGTGGCGCAATCACAGCTCACTAGAGCTTTAACTTCCTGGGCTCCAGCAATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524781.1 |
||
| CDS-3UTR CCA 90 bp | AGGATTGCTGGAGCCCAGGAAGTTAAAGCTCTAGTGAGCTGTGATTGCGCCACTATTAGCCAGGTGTGGTaGTGCTTGGTTGTGGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: RIAGAQEVKALVSCDCATISQVW*CLVVVL Trigger: TAGGACCACAACCAAGCACCACCACACCTGGCTAAT...AGTGGCGCAATCACAGCTCACTAGAGCTTTAACTTCCTGGGCTCCAGCAATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524781.1 |
||
| CDS-3UTR GCA 90 bp | AGGATTGCTGGAGCCCAGGAAGTTAAAGCTCTAGTGAGCTGTGATTGCGCCACTTACACCTGTAATCCCTaGACTTTCGGAGGCTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RIAGAQEVKALVSCDCATYTCNP*TFGGLG Trigger: ACCTAAGCCTCCGAAAGTGCAGGGATTACAGGTGTA...AGTGGCGCAATCACAGCTCACTAGAGCTTTAACTTCCTGGGCTCCAGCAATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524781.1 |
||
| CDS-3UTR CCA 90 bp | GAGAATTGCTTGAACCCAGGAGGTGAAGGTTGTAGTGAGCCGAGATGGTGCCATTTAATTAGCCAGGTGTaGTGGTGCTTGGTTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ENCLNPGGEGCSEPRWCHLISQV*WCLVVV Trigger: GACCACAACCAAGCACCACCACACCTGGCTAATTAA...ATGGCACCATCTCGGCTCACTACAACCTTCACCTCCTGGGTTCAAGCAATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524781.1 |
||
| CDS-3UTR TCA 90 bp | AGGATTGCTGGAGCCCAGGAAGTTAAAGCTCTAGTGAGCTGTGATTGCGCCACTAACAAAAATGCAGGCTaGATGCAGTGGCTTTACACC | + |
|
Preference number: 4 (lower is better) Translates to: RIAGAQEVKALVSCDCATNKNAG*MQWLYT Trigger: GGTGTAAAGCCACTGCATTCAGCCTGCATTTTTGTT...AGTGGCGCAATCACAGCTCACTAGAGCTTTAACTTCCTGGGCTCCAGCAATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524781.1 |
||
| CDS TCA 90 bp | ACAATTCTCCAGCCTCAGTCTCTCGAAGTGCTGGAATTACAGGCTTaGGCCACCACATGCGGCCTACTTATACTGCTAACCAAGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: TILQPQSLEVLELQA*ATTCGLLILLTKQI Trigger: AATCTGCTTGGTTAGCAGTATAAGTAGGCCGCATGTGGTGGCTCAAGCCTGTAATTCCAGCACTTCGAGAGACTGAGGCTGGAGAATTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650481.1 |
||
| CDS TCA 72 bp | GGCCATGAACTGGACTTGGCCCAGGGTAGAGTTTGCTaGCCCCTTATATTAAGTGGTGCACCAAAATTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: GHELDLAQGRVC*PLILSGAPKLK Trigger: TTTTAATTTTGGTGCACCACTTAATATAAGGGGTCAGCAAACTCTACCCTGGGCCAAGTCCAGTTCATGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525430.1 |
||