RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GEM (Homo sapiens)

Ensembl gene IDs: ENSG00000164949

Ensembl transcript IDs: ENST00000297596.3, ENST00000396194.6, ENST00000521817.1, ENST00000523433.1, ENST00000523660.1

Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGAAACCACATCTAACTTAAGTATTCAATCTAATATAGATTATTaGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGG +
Preference number: 1 (lower is better)
Translates to: GETTSNLSIQSNIDY*SQWPSTTAIKGTSG
Trigger: CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR CCA 90 bp GAGCCTATAAGGGACACATGTATCAGTTCCCAATTCTATATGTCTTaGTGGGCATTGAACAAAAATTGTTTGCTAAGCCTTTGTTTCCAG +
Preference number: 1 (lower is better)
Translates to: EPIRDTCISSQFYMS*WALNKNCLLSLCFQ
Trigger: CTGGAAACAAAGGCTTAGCAAACAATTTTTGTTCAATGCCCACCAAGACATATAGAATTGGGAACTGATACATGTGTCCCTTATAGGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR CAA 90 bp AGGGACACATGTATCAGTTCCCAATTCTATATGTCTTGGTGGGCATaGAACAAAAATTGTTTGCTAAGCCTTTGTTTCCAGCAAGGTCCA +
Preference number: 2 (lower is better)
Translates to: RDTCISSQFYMSWWA*NKNCLLSLCFQQGP
Trigger: TGGACCTTGCTGGAAACAAAGGCTTAGCAAACAATTTTTGTTCAATGCCCACCAAGACATATAGAATTGGGAACTGATACATGTGTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR-3UTR CCA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATAGATTATTGGTCCCAATaGCCTTCAACAACGGCCATC +
Preference number: 2 (lower is better)
Translates to: LPATMGETTSNLSIQSNIDYWSQ*PSTTAI
Trigger: GATGGCCGTTGTTGAAGGCCATTGGGACCAATAATC...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR-3UTR CCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTAGATTATTGGTCCCAATaGCCTTCAACAACGGCCATC +
Preference number: 2 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLDYWSQ*PSTTAI
Trigger: GATGGCCGTTGTTGAAGGCCATTGGGACCAATAATC...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR-3UTR CCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTAAGCTCCCTGCTACAATaGGGGAAACCACATCTAACT +
Preference number: 2 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLSSLLQ*GKPHLT
Trigger: AGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAGCT...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR-3UTR CCA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCATCTAATATAGATTATTaGTCCCAATGGCCTTCAACA +
Preference number: 2 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSSNIDY*SQWPST
Trigger: TGTTGAAGGCCATTGGGACCAATAATCTATATTAGA...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR-3UTR CCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTATTGTTTATGACTCATTaGCCTCAAAGTCACATATCA +
Preference number: 2 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLLFMTH*PQSHIS
Trigger: TGATATGTGACTTTGAGGCCAATGAGTCATAAACAA...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR-3UTR CAA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATAAAGTTTTCCCTCCTTaGAAGAAACTCATTGACAGC +
Preference number: 3 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYKVFPP*KKLIDS
Trigger: GCTGTCAATGAGTTTCTTCAAAGGAGGGAAAACTTT...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR CCA 72 bp TTAAGTATTCAATCTAATATAGATTATTGGTCCCAATaGCCTTCAACAACGGCCATCAAAGGGACATCTGGG +
Preference number: 3 (lower is better)
Translates to: LSIQSNIDYWSQ*PSTTAIKGTSG
Trigger: CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATATTAGATTGAATACTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR-3UTR CAA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATTTTGTTTATGACTCATaGGCCTCAAAGTCACATATC +
Preference number: 3 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYFVYDS*ASKSHI
Trigger: GATATGTGACTTTGAGGCCAATGAGTCATAAACAAA...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR-3UTR CAA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATATGTCTTGGTGGGCATaGAACAAAAATTGTTTGCTA +
Preference number: 3 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYMSWWA*NKNCLL
Trigger: TAGCAAACAATTTTTGTTCAATGCCCACCAAGACAT...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR CCA 72 bp AGGGACACATGTATCAGTTCCCAATTCTATATGTCTTaGTGGGCATTGAACAAAAATTGTTTGCTAAGCCTT +
Preference number: 3 (lower is better)
Translates to: RDTCISSQFYMS*WALNKNCLLSL
Trigger: AAGGCTTAGCAAACAATTTTTGTTCAATGCCCACCAAGACATATAGAATTGGGAACTGATACATGTGTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR CCA 72 bp ACATCTAACTTAAGTATTCAATCTAATATAGATTATTaGTCCCAATGGCCTTCAACAACGGCCATCAAAGGG +
Preference number: 3 (lower is better)
Translates to: TSNLSIQSNIDY*SQWPSTTAIKG
Trigger: CCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATATTAGATTGAATACTTAAGTTAGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGGGAGTGCTGCGCTGTaGCCGCCGTCCTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWGSAAL*PPSLPA
Trigger: GGCGGGCAAGGACGGCGGGCACAGCGCAGCACTCCC...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGACGGGCCCTGCGGAGCTaGATTCGCAGCTCAGATGCC +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGRALRS*IRSSDA
Trigger: GGCATCTGAGCTGCGAATCCAGCTCCGCAGGGCCCG...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGACGAGCGGGGAGTGCTaGGCTGTGCCCGCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWTSGEC*AVPAVL
Trigger: AAGGACGGCGGGCACAGCGCAGCACTCCCCGCTCGT...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGGGGATGCTCCAGCGCTaGTGCTGTGGCTGCATGCCC +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGGMLQR*CCGCMP
Trigger: GGGCATGCAGCCACAGCAGCAGCGCTGGAGCATCCC...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGGGAATGTCCTCTGTCTaGCGGGCCCTGCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGGMSSV*RALRSW
Trigger: CCAGCTCCGCAGGGCCCGGCAGACAGAGGACATTCC...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGCCAGCGCTGCTGCTGTaGCTGCATGCCCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGPALLL*LHAHSA
Trigger: GGCACTGTGGGCATGCAGCCACAGCAGCAGCGCTGG...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGAATGCCTGCCATCAGCTaGGATGCTCCAGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGMPAIS*DAPALL
Trigger: CAGCAGCGCTGGAGCATCCCAGCTGATGGCAGGCAT...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGCGGGCCCTGCGGAGCTaGATTCGCAGCTCAGATGCC +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGRALRS*IRSSDA
Trigger: GGCATCTGAGCTGCGAATCCAGCTCCGCAGGGCCCG...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATGGGAGTGCTGCGCTGTaGCCGCCGTCCTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYGSAAL*PPSLPA
Trigger: GGCGGGCAAGGACGGCGGGCACAGCGCAGCACTCCC...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGCTGCTGTGGCTGCATaGCCACAGTGCCCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWAAVAA*PQCPGA
Trigger: TGCGCCAGGGCACTGTGGGCATGCAGCCACAGCAGC...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGACGTCCCCGACCTGCATaGAGTGGTCATGGAGCCATT +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGRPRPA*SGHGAI
Trigger: AATGGCTCCATGACCACTGCATGCAGGTCGGGGACG...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGATATGCGTCCCCGACCTaGATGCAGTGGTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGYASPT*MQWSWS
Trigger: GCTCCATGACCACTGCATGCAGGTCGGGGACGCATA...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGCTGTCTGCCGGGCCCTaGGGAGCTGGATTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWLSAGP*GAGFAA
Trigger: AGCTGCGAATCCAGCTCCGCAGGGCCCGGCAGACAG...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGATCAGGGGTAGCAGAATaGCGGTTGCGGTGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGSGVAE*RLRWLY
Trigger: GTACAGCCACCGCAACCGCCATTCTGCTACCCCTGA...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGAAGATGTTGGCCAGAGTaGACTTGCCCACCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGRCWPE*TCPPPA
Trigger: AGCAGGGGGTGGGCAAGTCCACTCTGGCCAACATCT...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGAGATTCGCAGCTCAGATaGCTTCTCGAAGCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGDSQLR*LLEARS
Trigger: CGAGCGAGCTTCGAGAAGGCATCTGAGCTGCGAATC...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGAAGCTCCTTCACGTTGTaGTGGACAGCTGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGSSFTL*WTAAEV
Trigger: GACCTCTGCAGCTGTCCAGCACAACGTGAAGGAGCT...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGGAATGGCGGTTGCGGTaGCTGTACTGGTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGEWRLR*LYWWGS
Trigger: AGAGCCCCACCAGTACAGCCACCGCAACCGCCATTC...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGCAGCTTCGGCGGCAGTaGTCCTCAGGGGTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGQLRRQ*SSGVAE
Trigger: TTCTGCTACCCCTGAGGACCACTGCCGCCGAAGCTG...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGGTCATCGTTGAGTCTTaGCTCGGCCGGATCGGCGTC +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGVIVES*LGRIGV
Trigger: GACGCCGATCCGGCCGAGCCAAGACTCAACGATGAC...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396194.6
CDS-3UTR GCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATACGAGCGGGGAGTGCTaGGCTGTGCCCGCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYTSGEC*AVPAVL
Trigger: AAGGACGGCGGGCACAGCGCAGCACTCCCCGCTCGT...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGATGCTCCAGCGCTGCTaGTGTGGCTGCATGCCCACA +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWMLQRC*CGCMPT
Trigger: TGTGGGCATGCAGCCACAGCAGCAGCGCTGGAGCAT...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGATTCTGGACCATCAGATaGCTGCCATCAGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGFWTIR*LPSAGM
Trigger: CATCCCAGCTGATGGCAGGCATCTGATGGTCCAGAA...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCCGCGTGGGTCCGCGCTaGGATACCCGGGCCAACGAG +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRRVGPR*DTRANE
Trigger: CTCGTTGGCCCGGGTATCCCAGCGCGGACCCACGCG...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATGCCGTCCCCCTTACTTaGCTCGGCCGGATCGGCGTC +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYAVPLT*LGRIGV
Trigger: GACGCCGATCCGGCCGAGCCAAGTAAGGGGGACGGC...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297596.3
CDS-3UTR CCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGATGCCTGCCATCAGCTaGGATGCTCCAGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWMPAIS*DAPALL
Trigger: CAGCAGCGCTGGAGCATCCCAGCTGATGGCAGGCAT...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGTCAGGGGTAGCAGAATaGCGGTTGCGGTGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGSGVAE*RLRWLY
Trigger: GTACAGCCACCGCAACCGCCATTCTGCTACCCCTGA...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGTGCCCCAGAAGCGCCTaGCTTTCCTGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWCPRSA*LSWACS
Trigger: AGAGCATGCCCAGGAAAGCCAGGCGCTTCTGGGGCA...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGAAGCTCGCTCGGTCTGTaGTTGAGTAGACAATCAGGT +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGSSLGL*LSRQSG
Trigger: ACCTGATTGTCTACTCAATCACAGACCGAGCGAGCT...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATACCAACGAGCGGGGAGTaGTGCGCTGTGCCCGCCGTC +
Preference number: 4 (lower is better)
Translates to: LPATMGETTSNLSIQSNIPTSGE*CAVPAV
Trigger: GACGGCGGGCACAGCGCAGCACTCCCCGCTCGTTGG...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCAGGGATGCTCCAGCGCTaGTGCTGTGGCTGCATGCCC +
Preference number: 4 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSGMLQR*CCGCMP
Trigger: GGGCATGCAGCCACAGCAGCAGCGCTGGAGCATCCC...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGAGCTGTCATGCACACCTaGAAAGATGTTGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGAVMHT*KDVGQS
Trigger: ACTCTGGCCAACATCTTTGCAGGTGTGCATGACAGC...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTACGCGTGGGTCCGCGCTaGGATACCCGGGCCAACGAG +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLRVGPR*DTRANE
Trigger: CTCGTTGGCCCGGGTATCCCAGCGCGGACCCACGCG...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATCGTCAGCGTATCGCGTaGGTCCGCGCTGGGATACCC +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYRQRIA*VRAGIP
Trigger: GGGTATCCCAGCGCGGACCCACGCGATACGCTGACG...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATCCAGCGCTGCTGCTGTaGCTGCATGCCCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYPALLL*LHAHSA
Trigger: GGCACTGTGGGCATGCAGCCACAGCAGCAGCGCTGG...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGCTCAGAGGAGATGACTaGGTCTGTGGAGTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGLRGDD*VCGVRG
Trigger: TCCTCTGACTCCACAGACTCAGTCATCTCCTCTGAG...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATCCCCCTGCTCCCCTATaGGCACCACTCGGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYPPAPL*APLGSR
Trigger: CCTACTACCGAGTGGTGCTCATAGGGGAGCAGGGGG...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCACCCCCTGCTCCCCTATaGGCACCACTCGGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSPPAPL*APLGSR
Trigger: CCTACTACCGAGTGGTGCTCATAGGGGAGCAGGGGG...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGAAAGGGACATCTGGGTaGCCCTGGGTTCCTAGAGTA +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGKGTSG*PWVPRV
Trigger: TACTCTAGGAACCCAGGGTCACCCAGATGTCCCTTT...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATTGGCCAGAGTGGACTTaGCCACCCCCTGCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYWPEWT*PPPAPL
Trigger: TAGGGGAGCAGGGGGTGGGCAAGTCCACTCTGGCCA...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGGTAGACAATCAGGTATaGGTCCCCGACCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGVDNQV*VPDLHA
Trigger: TGCATGCAGGTCGGGGACGCATACCTGATTGTCTAC...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGTTTTGGCCACGATCTTaGCCCAGAAGCGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWFWPRS*PRSAWL
Trigger: AAGCCAGGCGCTTCTGGGGCAAGATCGTGGCCAAAA...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGAAAGTTCTGCGGGCTaGGAAACTCCCACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWESSAG*ETPTLS
Trigger: GGAGAGAGTGGGAGTTTCCCAGCCCGCAGAACTTTC...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297596.3
CDS-3UTR CCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGTGGTGGGGCTCTTTCTaGACCATCAGATGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWWWGSF*TIRCLP
Trigger: TGGCAGGCATCTGATGGTCCAGAAAGAGCCCCACCA...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGTCCTTCACGTTGTGCTaGACAGCTGCAGAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWSFTLC*TAAEVS
Trigger: CGAGACCTCTGCAGCTGTCCAGCACAACGTGAAGGA...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGAGCGCCTGGCTTTCCTaGGCATGCTCTCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWSAWLS*ACSPSF
Trigger: AAAGGAAGGAGAGCATGCCCAGGAAAGCCAGGCGCT...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGAAGTACAGAGAGGTCATaGCAGGATTTGGACTTGAGC +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGSTERS*QDLDLS
Trigger: GCTCAAGTCCAAATCCTGCCATGACCTCTCTGTACT...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGAAGCTCCCTGCTACAATaGGGGAAACCACATCTAACT +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGSSLLQ*GKPHLT
Trigger: AGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAGCT...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGCTGACTCAGAGGAGATaGCTGAGTCTGTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWLTQRR*LSLWSQ
Trigger: CTGACTCCACAGACTCAGTCATCTCCTCTGAGTCAG...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGCAACTTCGAAAGTTCTaGGGGCTGGGAAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWQLRKF*GLGNSH
Trigger: GTGGGAGTTTCCCAGCCCGCAGAACTTTCGAAGTTG...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297596.3
CDS-3UTR GCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTACTGTCTGCCGGGCCCTaGGGAGCTGGATTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLLSAGP*GAGFAA
Trigger: AGCTGCGAATCCAGCTCCGCAGGGCCCGGCAGACAG...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTAGGAATGTCCTCTGTCTaGCGGGCCCTGCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLGMSSV*RALRSW
Trigger: CCAGCTCCGCAGGGCCCGGCAGACAGAGGACATTCC...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGCACCTGTCGCACAATaGCCTCAAACAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWAPVAQ*PQTAPS
Trigger: TGAAGGAGCTGTTTGAGGGCATTGTGCGACAGGTGC...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGTGGCTTTCCTGGGCATaGTCTCCTTCCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGWLSWA*SPSFSG
Trigger: ACCAGAAAAGGAAGGAGAGCATGCCCAGGAAAGCCA...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTACGTCAGCGTATCGCGTaGGTCCGCGCTGGGATACCC +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLRQRIA*VRAGIP
Trigger: GGGTATCCCAGCGCGGACCCACGCGATACGCTGACG...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATGAATGGCGGTTGCGGTaGCTGTACTGGTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYEWRLR*LYWWGS
Trigger: AGAGCCCCACCAGTACAGCCACCGCAACCGCCATTC...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGCACCTGCAAAGATGTTaGCCAGAGTGGACTTGCCCA +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWHLQRC*PEWTCP
Trigger: TGGGCAAGTCCACTCTGGCCAACATCTTTGCAGGTG...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGTGCATGCAGTGGTCATaGAGCCATTCATTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGCMQWS*SHSFSP
Trigger: GGGGGAAAATGAATGGCTCCATGACCACTGCATGCA...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCATGCTCCAGCGCTGCTaGTGTGGCTGCATGCCCACA +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRMLQRC*CGCMPT
Trigger: TGTGGGCATGCAGCCACAGCAGCAGCGCTGGAGCAT...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCAGGACCATCAGATGCCTaGCATCAGCTGGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSGPSDA*HQLGCS
Trigger: GGAGCATCCCAGCTGATGGCAGGCATCTGATGGTCC...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTATGGCCAGAGTGGACTTaGCCACCCCCTGCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLWPEWT*PPPAPL
Trigger: TAGGGGAGCAGGGGGTGGGCAAGTCCACTCTGGCCA...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGACAGGAGTATAATCGTTaGACTTTCCCCATCAACCAT +
Preference number: 4 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGQEYNR*TFPINH
Trigger: ATGGTTGATGGGGAAAGTGCAACGATTATACTCCTG...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATTATGCGTCCCCGACCTaGATGCAGTGGTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYYASPT*MQWSWS
Trigger: GCTCCATGACCACTGCATGCAGGTCGGGGACGCATA...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGTTGTGCTGGACAGCTaGAGAGGTCTCGATGAACTT +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWVVLDS*RGLDEL
Trigger: AAGTTCATCGAGACCTCTGCAGCTGTCCAGCACAAC...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGTGCATGCAGTGGTCATaGAGCCATTCATTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWCMQWS*SHSFSP
Trigger: GGGGGAAAATGAATGGCTCCATGACCACTGCATGCA...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCTGCCCCAGAAGCGCCTaGCTTTCCTGGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRCPRSA*LSWACS
Trigger: AGAGCATGCCCAGGAAAGCCAGGCGCTTCTGGGGCA...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATGTTCATTCTTCTCCTTaGTGTCCCGCCGAAGGCGCA +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYVHSSP*CPAEGA
Trigger: TGCGCCTTCGGCGGGACAGCAAGGAGAAGAATGAAC...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTACAGCTTCGGCGGCAGTaGTCCTCAGGGGTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLQLRRQ*SSGVAE
Trigger: TTCTGCTACCCCTGAGGACCACTGCCGCCGAAGCTG...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCAGAAAATCCCAGTGCTaGGCGCACGTTCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRRKSQC*AHVPGV
Trigger: AACCCCTGGAACGTGCGCTCAGCACTGGGATTTTCT...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297596.3
CDS-3UTR TCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATTGCCCTGGCGCATGGTaGCATTATTCAGAGTCATCG +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYCPGAW*HYSESS
Trigger: CGATGACTCTGAATAATGTCACCATGCGCCAGGGCA...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCATGCCCTGGCGCATGGTaGCATTATTCAGAGTCATCG +
Preference number: 4 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSCPGAW*HYSESS
Trigger: CGATGACTCTGAATAATGTCACCATGCGCCAGGGCA...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCACTCAGAGGAGATGACTaGGTCTGTGGAGTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSLRGDD*VCGVRG
Trigger: TCCTCTGACTCCACAGACTCAGTCATCTCCTCTGAG...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTAGGACCATCAGATGCCTaGCATCAGCTGGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLGPSDA*HQLGCS
Trigger: GGAGCATCCCAGCTGATGGCAGGCATCTGATGGTCC...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCCGCAGTCGCTGTCCATaGTGTCATGCACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRRSRCP*CHAHLQ
Trigger: TTGCAGGTGTGCATGACAGCATGGACAGCGACTGCG...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTACGTCCCCGACCTGCATaGAGTGGTCATGGAGCCATT +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLRPRPA*SGHGAI
Trigger: AATGGCTCCATGACCACTGCATGCAGGTCGGGGACG...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCGATTCGCAGCTCAGATaGCTTCTCGAAGCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRDSQLR*LLEARS
Trigger: CGAGCGAGCTTCGAGAAGGCATCTGAGCTGCGAATC...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCTTTTGGCCACGATCTTaGCCCAGAAGCGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRFWPRS*PRSAWL
Trigger: AAGCCAGGCGCTTCTGGGGCAAGATCGTGGCCAAAA...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGATCTTTCATTTCCCATaGATCATGTTGCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGIFHFP*IMLPTR
Trigger: CCTTGTGGGCAACATGATGCATGGGAAATGAAAGAT...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCTGGTGGGGCTCTTTCTaGACCATCAGATGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRWWGSF*TIRCLP
Trigger: TGGCAGGCATCTGATGGTCCAGAAAGAGCCCCACCA...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATACGGTGGCTGTACTGGTaGGGCTCTTTCTGGACCATC +
Preference number: 4 (lower is better)
Translates to: LPATMGETTSNLSIQSNIRWLYW*GSFWTI
Trigger: GATGGTCCAGAAAGAGCCCCACCAGTACAGCCACCG...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTATTGCGGTGGCTGTACTaGTGGGGCTCTTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLLRWLY*WGSFWT
Trigger: GGTCCAGAAAGAGCCCCACCAGTACAGCCACCGCAA...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATATTGCGGTGGCTGTACTaGTGGGGCTCTTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: LPATMGETTSNLSIQSNILRWLY*WGSFWT
Trigger: GGTCCAGAAAGAGCCCCACCAGTACAGCCACCGCAA...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGTGCCAACCAAAATTATaGGAATGTCCTCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWCQPKL*ECPLSA
Trigger: GGCAGACAGAGGACATTCCCATAATTTTGGTTGGCA...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCTCCTTCACGTTGTGCTaGACAGCTGCAGAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRSFTLC*TAAEVS
Trigger: CGAGACCTCTGCAGCTGTCCAGCACAACGTGAAGGA...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCCTGACTCAGAGGAGATaGCTGAGTCTGTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRLTQRR*LSLWSQ
Trigger: CTGACTCCACAGACTCAGTCATCTCCTCTGAGTCAG...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCACAGGCTCTCCCTTCTaGTACAGACACTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRTGSPF*YRHFSA
Trigger: TGCCGAGAAGTGTCTGTATCAGAAGGGAGAGCCTGT...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCAGCTGTCATGCACACCTaGAAAGATGTTGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSAVMHT*KDVGQS
Trigger: ACTCTGGCCAACATCTTTGCAGGTGTGCATGACAGC...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATACGCAGTCGCTGTCCATaGTGTCATGCACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: LPATMGETTSNLSIQSNIRSRCP*CHAHLQ
Trigger: TTGCAGGTGTGCATGACAGCATGGACAGCGACTGCG...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTAAGCTCCTTCACGTTGTaGTGGACAGCTGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLSSFTL*WTAAEV
Trigger: GACCTCTGCAGCTGTCCAGCACAACGTGAAGGAGCT...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCGCACCTGTCGCACAATaGCCTCAAACAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRAPVAQ*PQTAPS
Trigger: TGAAGGAGCTGTTTGAGGGCATTGTGCGACAGGTGC...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTAGTTCATTCTTCTCCTTaGTGTCCCGCCGAAGGCGCA +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLVHSSP*CPAEGA
Trigger: TGCGCCTTCGGCGGGACAGCAAGGAGAAGAATGAAC...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATTGGCTTTCCTGGGCATaGTCTCCTTCCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYWLSWA*SPSFSG
Trigger: ACCAGAAAAGGAAGGAGAGCATGCCCAGGAAAGCCA...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATAATACGCTAGCTCCCTaGTACAATGGGGGAAACCAC +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYNTLAP*YNGGNH
Trigger: GTGGTTTCCCCCATTGTAGCAGGGAGCTAGCGTATT...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATAAGCGCCTGGCTTTCCTaGGCATGCTCTCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LPATMGETTSNLSIQSNISAWLS*ACSPSF
Trigger: AAAGGAAGGAGAGCATGCCCAGGAAAGCCAGGCGCT...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCCGCTCGGTCTGTGATTaGGTAGACAATCAGGTATGC +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRRSVCD*VDNQVC
Trigger: GCATACCTGATTGTCTACTCAATCACAGACCGAGCG...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCAGCTCGCTCGGTCTGTaGTTGAGTAGACAATCAGGT +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRSSLGL*LSRQSG
Trigger: ACCTGATTGTCTACTCAATCACAGACCGAGCGAGCT...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATAACAGGCTCTCCCTTCTaGTACAGACACTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: LPATMGETTSNLSIQSNITGSPF*YRHFSA
Trigger: TGCCGAGAAGTGTCTGTATCAGAAGGGAGAGCCTGT...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATAAAAGGGACATCTGGGTaGCCCTGGGTTCCTAGAGTA +
Preference number: 4 (lower is better)
Translates to: LPATMGETTSNLSIQSNIKGTSG*PWVPRV
Trigger: TACTCTAGGAACCCAGGGTCACCCAGATGTCCCTTT...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATCTGTCCATGCTGTCATaGACACCTGCAAAGATGTTG +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYLSMLS*TPAKML
Trigger: CAACATCTTTGCAGGTGTGCATGACAGCATGGACAG...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCACTGTCCATGCTGTCATaGACACCTGCAAAGATGTTG +
Preference number: 4 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSLSMLS*TPAKML
Trigger: CAACATCTTTGCAGGTGTGCATGACAGCATGGACAG...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATAGTAGACAATCAGGTATaGGTCCCCGACCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: LPATMGETTSNLSIQSNIVDNQV*VPDLHA
Trigger: TGCATGCAGGTCGGGGACGCATACCTGATTGTCTAC...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCGTTGTGCTGGACAGCTaGAGAGGTCTCGATGAACTT +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRVVLDS*RGLDEL
Trigger: AAGTTCATCGAGACCTCTGCAGCTGTCCAGCACAAC...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATACACCTGCAAAGATGTTaGCCAGAGTGGACTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LPATMGETTSNLSIQSNIHLQRC*PEWTCP
Trigger: TGGGCAAGTCCACTCTGGCCAACATCTTTGCAGGTG...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCCCGACCTGCATGCAGTaGTCATGGAGCCATTCATTT +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRPTCMQ*SWSHSF
Trigger: AAATGAATGGCTCCATGACCACTGCATGCAGGTCGG...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATGATTATTGGTCCCAATaGCCTTCAACAACGGCCATC +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYDYWSQ*PSTTAI
Trigger: GATGGCCGTTGTTGAAGGCCATTGGGACCAATAATC...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR TCA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATACGCTCGGTCTGTGATTaGGTAGACAATCAGGTATGC +
Preference number: 4 (lower is better)
Translates to: LPATMGETTSNLSIQSNIRSVCD*VDNQVC
Trigger: GCATACCTGATTGTCTACTCAATCACAGACCGAGCG...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTAAATACGCTAGCTCCCTaGTACAATGGGGGAAACCAC +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLNTLAP*YNGGNH
Trigger: GTGGTTTCCCCCATTGTAGCAGGGAGCTAGCGTATT...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR GCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATATCTTTCATTTCCCATaGATCATGTTGCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYIFHFP*IMLPTR
Trigger: CCTTGTGGGCAACATGATGCATGGGAAATGAAAGAT...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCTGCCAACCAAAATTATaGGAATGTCCTCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRCQPKL*ECPLSA
Trigger: GGCAGACAGAGGACATTCCCATAATTTTGGTTGGCA...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTAAGTACAGAGAGGTCATaGCAGGATTTGGACTTGAGC +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLSTERS*QDLDLS
Trigger: GCTCAAGTCCAAATCCTGCCATGACCTCTCTGTACT...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGTTGTTTATGACTCATTaGCCTCAAAGTCACATATCA +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWLFMTH*PQSHIS
Trigger: TGATATGTGACTTTGAGGCCAATGAGTCATAAACAA...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGGTCAACCAAAGTACTaGAAGTTTTTATGCTATATG +
Preference number: 4 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWGQPKY*KFLCYM
Trigger: CATATAGCATAAAAACTTCCAGTACTTTGGTTGACC...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATTCTAATATAGATTATTaGTCCCAATGGCCTTCAACA +
Preference number: 4 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYSNIDY*SQWPST
Trigger: TGTTGAAGGCCATTGGGACCAATAATCTATATTAGA...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
3UTR CAA 72 bp TGTATCAGTTCCCAATTCTATATGTCTTGGTGGGCATaGAACAAAAATTGTTTGCTAAGCCTTTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: CISSQFYMSWWA*NKNCLLSLCFQ
Trigger: CTGGAAACAAAGGCTTAGCAAACAATTTTTGTTCAATGCCCACCAAGACATATAGAATTGGGAACTGATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTACAAAAATCTTTCATTTCCCATGCATCATGTTGCCCACAAGGCTAATACGCGGTCAACCAAAGTACTaGAAGTTTTTATGCTATATG +
Preference number: 4 (lower is better)
Translates to: FTKIFHFPCIMLPTRLIRGQPKY*KFLCYM
Trigger: CATATAGCATAAAAACTTCCAGTACTTTGGTTGACC...GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAAATGAAAGATTTTTGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CCA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTATCTAATATAGATTATTaGTCCCAATGGCCTTCAACA +
Preference number: 4 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLSNIDY*SQWPST
Trigger: TGTTGAAGGCCATTGGGACCAATAATCTATATTAGA...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS GCA 90 bp GCGTGGGTCCGCGCTGGGATACCCGGGCCAACGAGCGGGGAGTGCTaGGCTGTGCCCGCCGTCCTTGCCCGCCGCCTGCAGCCGCCGCGG +
Preference number: 5 (lower is better)
Translates to: AWVRAGIPGPTSGEC*AVPAVLARRLQPPR
Trigger: CCGCGGCGGCTGCAGGCGGCGGGCAAGGACGGCGGGCACAGCGCAGCACTCCCCGCTCGTTGGCCCGGGTATCCCAGCGCGGACCCACGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396194.6
ENST00000523660.1
CDS CCA 90 bp GGCCGGATCGGCGTCGGGGCGTCAGCGTATCGCGTGGGTCCGCGCTaGGATACCCGGGCCAACGAGCGGGGAGTGCTGCGCTGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: GRIGVGASAYRVGPR*DTRANERGVLRCAR
Trigger: GCGGGCACAGCGCAGCACTCCCCGCTCGTTGGCCCGGGTATCCCAGCGCGGACCCACGCGATACGCTGACGCCCCGACGCCGATCCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523660.1
CDS CCA 90 bp AGTCTTGGCTCGGCCGGATCGGCGTCGGGGCGTCAGCGTATCGCGTaGGTCCGCGCTGGGATACCCGGGCCAACGAGCGGGGAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SLGSAGSASGRQRIA*VRAGIPGPTSGECC
Trigger: GCAGCACTCCCCGCTCGTTGGCCCGGGTATCCCAGCGCGGACCCACGCGATACGCTGACGCCCCGACGCCGATCCGGCCGAGCCAAGACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396194.6
ENST00000523660.1
CDS CCA 90 bp TTACTTGGCTCGGCCGGATCGGCGTCGGGGCGTCAGCGTATCGCGTaGGTCCGCGCTGGGATACCCGGGCCAACGAGCGGGGAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: LLGSAGSASGRQRIA*VRAGIPGPTSGECC
Trigger: GCAGCACTCCCCGCTCGTTGGCCCGGGTATCCCAGCGCGGACCCACGCGATACGCTGACGCCCCGACGCCGATCCGGCCGAGCCAAGTAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000521817.1
CDS CCA 90 bp AACTCCCACTCTCTCCCTTCTCCGTCTCGGGCCGTCCCCCTTACTTaGCTCGGCCGGATCGGCGTCGGGGCGTCAGCGTATCGCGTGGGT +
Preference number: 5 (lower is better)
Translates to: NSHSLPSPSRAVPLT*LGRIGVGASAYRVG
Trigger: ACCCACGCGATACGCTGACGCCCCGACGCCGATCCGGCCGAGCCAAGTAAGGGGGACGGCCCGAGACGGAGAAGGGAGAGAGTGGGAGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000521817.1
CDS GCA 90 bp TGCGGTGGCTGTACTGGTGGGGCTCTTTCTGGACCATCAGATGCCTaGCATCAGCTGGGATGCTCCAGCGCTGCTGCTGTGGCTGCATGC +
Preference number: 5 (lower is better)
Translates to: CGGCTGGALSGPSDA*HQLGCSSAAAVAAC
Trigger: GCATGCAGCCACAGCAGCAGCGCTGGAGCATCCCAGCTGATGGCAGGCATCTGATGGTCCAGAAAGAGCCCCACCAGTACAGCCACCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS GCA 90 bp ACCTCCCAGCACCTCGCAGTCGCTGTCCATGCTGTCATGCACACCTaGAAAGATGTTGGCCAGAGTGGACTTGCCCACCCCCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: TSQHLAVAVHAVMHT*KDVGQSGLAHPLLP
Trigger: GGGGAGCAGGGGGTGGGCAAGTCCACTCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCGACTGCGAGGTGCTGGGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521817.1
ENST00000523660.1
CDS CCA 90 bp GTACTGGTGGGGCTCTTTCTGGACCATCAGATGCCTGCCATCAGCTaGGATGCTCCAGCGCTGCTGCTGTGGCTGCATGCCCACAGTGCC +
Preference number: 5 (lower is better)
Translates to: VLVGLFLDHQMPAIS*DAPALLLWLHAHSA
Trigger: GGCACTGTGGGCATGCAGCCACAGCAGCAGCGCTGGAGCATCCCAGCTGATGGCAGGCATCTGATGGTCCAGAAAGAGCCCCACCAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS CCA 90 bp CAGTGGTCCTCAGGGGTAGCAGAATGGCGGTTGCGGTGGCTGTACTaGTGGGGCTCTTTCTGGACCATCAGATGCCTGCCATCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: QWSSGVAEWRLRWLY*WGSFWTIRCLPSAG
Trigger: CCCAGCTGATGGCAGGCATCTGATGGTCCAGAAAGAGCCCCACCAGTACAGCCACCGCAACCGCCATTCTGCTACCCCTGAGGACCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS CCA 90 bp GAGATGACTGAGTCTGTGGAGTCAGAGGACCAGCTTCGGCGGCAGTaGTCCTCAGGGGTAGCAGAATGGCGGTTGCGGTGGCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: EMTESVESEDQLRRQ*SSGVAEWRLRWLYW
Trigger: CCAGTACAGCCACCGCAACCGCCATTCTGCTACCCCTGAGGACCACTGCCGCCGAAGCTGGTCCTCTGACTCCACAGACTCAGTCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS TCA 90 bp AGCGCTGCTGCTGTGGCTGCATGCCCACAGTGCCCTGGCGCATGGTaGCATTATTCAGAGTCATCGTTGAGTCTTGGCTCGGCCGGATCG +
Preference number: 5 (lower is better)
Translates to: SAAAVAACPQCPGAW*HYSESSLSLGSAGS
Trigger: CGATCCGGCCGAGCCAAGACTCAACGATGACTCTGAATAATGTCACCATGCGCCAGGGCACTGTGGGCATGCAGCCACAGCAGCAGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396194.6
ENST00000523660.1
CDS CCA 90 bp GCACGTTCCAGGGGTTCTTTTCTCAACTTCGAAAGTTCTGCGGGCTaGGAAACTCCCACTCTCTCCCTTCTCCGTCTCGGGCCGTCCCCC +
Preference number: 5 (lower is better)
Translates to: ARSRGSFLNFESSAG*ETPTLSLLRLGPSP
Trigger: GGGGGACGGCCCGAGACGGAGAAGGGAGAGAGTGGGAGTTTCCCAGCCCGCAGAACTTTCGAAGTTGAGAAAAGAACCCCTGGAACGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000521817.1
CDS CCA 90 bp TGGTCCTCAGGGGTAGCAGAATGGCGGTTGCGGTGGCTGTACTGGTaGGGCTCTTTCTGGACCATCAGATGCCTGCCATCAGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: WSSGVAEWRLRWLYW*GSFWTIRCLPSAGM
Trigger: CATCCCAGCTGATGGCAGGCATCTGATGGTCCAGAAAGAGCCCCACCAGTACAGCCACCGCAACCGCCATTCTGCTACCCCTGAGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS GCA 90 bp CATTCTTCTCCTTGCTGTCCCGCCGAAGGCGCACCTGTCGCACAATaGCCTCAAACAGCTCCTTCACGTTGTGCTGGACAGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: HSSPCCPAEGAPVAQ*PQTAPSRCAGQLQR
Trigger: CCTCTGCAGCTGTCCAGCACAACGTGAAGGAGCTGTTTGAGGGCATTGTGCGACAGGTGCGCCTTCGGCGGGACAGCAAGGAGAAGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS TCA 90 bp AGCGCTGCTGCTGTGGCTGCATGCCCACAGTGCCCTGGCGCATGGTaGCATTATTCAGAGTCATCGTTGAGTCATGCTGCCCACACTGTC +
Preference number: 5 (lower is better)
Translates to: SAAAVAACPQCPGAW*HYSESSLSHAAHTV
Trigger: GACAGTGTGGGCAGCATGACTCAACGATGACTCTGAATAATGTCACCATGCGCCAGGGCACTGTGGGCATGCAGCCACAGCAGCAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523433.1
CDS GCA 90 bp TCTCCTTCCTTTTCTGGTAGGCCAGCCGCCGTTCATTCTTCTCCTTaGTGTCCCGCCGAAGGCGCACCTGTCGCACAATGCCCTCAAACA +
Preference number: 5 (lower is better)
Translates to: SPSFSGRPAAVHSSP*CPAEGAPVAQCPQT
Trigger: TGTTTGAGGGCATTGTGCGACAGGTGCGCCTTCGGCGGGACAGCAAGGAGAAGAATGAACGGCGGCTGGCCTACCAGAAAAGGAAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS GCA 90 bp TATGTATCTTCTCCCAGCACCTCGCAGTCGCTGTCCATGCTGTCATaGACACCTGCAAAGATGTTGGCCAGAGTGGACTTGCCCACCCCC +
Preference number: 5 (lower is better)
Translates to: YVSSPSTSQSLSMLS*TPAKMLARVDLPTP
Trigger: GGGGGTGGGCAAGTCCACTCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCGACTGCGAGGTGCTGGGAGAAGATACATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGGCCGTCCCCCTTACTaGGCTCGGCCGGATCGGCGT +
Preference number: 5 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWGRPPY*ARPDRR
Trigger: ACGCCGATCCGGCCGAGCCAAGTAAGGGGGACGGCC...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297596.3
CDS TCA 90 bp AGCGCTGCTGCTGTGGCTGCATGCCCACAGTGCCCTGGCGCATGGTaGCATTATTCAGAGTCATCGTTGAGTCCAGAAAATCCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SAAAVAACPQCPGAW*HYSESSLSPENPSA
Trigger: AGCACTGGGATTTTCTGGACTCAACGATGACTCTGAATAATGTCACCATGCGCCAGGGCACTGTGGGCATGCAGCCACAGCAGCAGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000521817.1
CDS-3UTR CAA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGACGTTCATTCTTCTCCTaGCTGTCCCGCCGAAGGCGC +
Preference number: 5 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGRSFFS*LSRRRR
Trigger: GCGCCTTCGGCGGGACAGCAAGGAGAAGAATGAACG...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS TCA 90 bp TGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGTaGCCCTGGGTTCCTAGAGTACAGAGAGGTCATGGCAGGATTTGG +
Preference number: 5 (lower is better)
Translates to: WSQWPSTTAIKGTSG*PWVPRVQRGHGRIW
Trigger: CCAAATCCTGCCATGACCTCTCTGTACTCTAGGAACCCAGGGTCACCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS GCA 90 bp TTCGTTCATATGTATCTTCTCCCAGCACCTCGCAGTCGCTGTCCATaGTGTCATGCACACCTGCAAAGATGTTGGCCAGAGTGGACTTGC +
Preference number: 5 (lower is better)
Translates to: FVHMYLLPAPRSRCP*CHAHLQRCWPEWTC
Trigger: GCAAGTCCACTCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCGACTGCGAGGTGCTGGGAGAAGATACATATGAACGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGTAGCAGAATGGCGGTaGCGGTGGCTGTACTGGTGG +
Preference number: 5 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWVAEWR*RWLYWW
Trigger: CCACCAGTACAGCCACCGCAACCGCCATTCTGCTAC...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGTTTTTGGCCACGATCTaGCCCCAGAAGCGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGFLATI*PQKRLA
Trigger: AGCCAGGCGCTTCTGGGGCAAGATCGTGGCCAAAAA...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCATTGGCCAGAGTGGACTaGCCCACCCCCTGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSLARVD*PTPCSP
Trigger: AGGGGAGCAGGGGGTGGGCAAGTCCACTCTGGCCAA...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGAACAGCTCCTTCACGTaGTGCTGGACAGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGNSSFT*CWTAAE
Trigger: CTCTGCAGCTGTCCAGCACAACGTGAAGGAGCTGTT...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGTTTTTGGCCACGATCTaGCCCCAGAAGCGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWFLATI*PQKRLA
Trigger: AGCCAGGCGCTTCTGGGGCAAGATCGTGGCCAAAAA...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATGTAGCAGAATGGCGGTaGCGGTGGCTGTACTGGTGG +
Preference number: 5 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYVAEWR*RWLYWW
Trigger: CCACCAGTACAGCCACCGCAACCGCCATTCTGCTAC...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATCGTTCATTCTTCTCCTaGCTGTCCCGCCGAAGGCGC +
Preference number: 5 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYRSFFS*LSRRRR
Trigger: GCGCCTTCGGCGGGACAGCAAGGAGAAGAATGAACG...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGAATATTCTTGTTGTTTTaGGCCACGATCTTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGIFLLF*ATILPQ
Trigger: CTGGGGCAAGATCGTGGCCAAAAACAACAAGAATAT...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGTTCCCATGCATCATGTaGCCCACAAGGCTAATACGC +
Preference number: 5 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGFPCIM*PTRLIR
Trigger: GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAA...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp ATGCATCATGTTGCCCACAAGGCTAATACGCTAGCTCCCTGCTACAATGGGGGAAAAGTTTTCCCTCCTTaGAAGAAACTCATTGACAGC +
Preference number: 5 (lower is better)
Translates to: MHHVAHKANTLAPCYNGGKVFPP*KKLIDS
Trigger: GCTGTCAATGAGTTTCTTCAAAGGAGGGAAAACTTT...TCCCCCATTGTAGCAGGGAGCTAGCGTATTAGCCTTGTGGGCAACATGATGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGTTGTTTGCTAAGCCTTaGTTTCCAGCAAGGTCCACA +
Preference number: 5 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGLFAKP*FPARST
Trigger: TGTGGACCTTGCTGGAAACAAAGGCTTAGCAAACAA...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTAACACCTGCAAAGATGTaGGCCAGAGTGGACTTGCCC +
Preference number: 5 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLTPAKM*ARVDLP
Trigger: GGGCAAGTCCACTCTGGCCAACATCTTTGCAGGTGT...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATAACACCTGCAAAGATGTaGGCCAGAGTGGACTTGCCC +
Preference number: 5 (lower is better)
Translates to: LPATMGETTSNLSIQSNITPAKM*ARVDLP
Trigger: GGGCAAGTCCACTCTGGCCAACATCTTTGCAGGTGT...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATAAACAGCTCCTTCACGTaGTGCTGGACAGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: LPATMGETTSNLSIQSNINSSFT*CWTAAE
Trigger: CTCTGCAGCTGTCCAGCACAACGTGAAGGAGCTGTT...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp TATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGTTGAAGGCCATATTCTaGTTGTTTTTGGCCACGATC +
Preference number: 5 (lower is better)
Translates to: YRLLVPMAFNNGHQRDIWLKAIF*LFLATI
Trigger: GATCGTGGCCAAAAACAACAAGAATATGGCCTTCAA...CCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp ATAGATTATTGGTCCCAATGGCCTTCAACAACGGCCATCAAAGGGACATCTGGGAAAGTTTTCCCTCCTTaGAAGAAACTCATTGACAGC +
Preference number: 5 (lower is better)
Translates to: IDYWSQWPSTTAIKGTSGKVFPP*KKLIDS
Trigger: GCTGTCAATGAGTTTCTTCAAAGGAGGGAAAACTTT...CCCAGATGTCCCTTTGATGGCCGTTGTTGAAGGCCATTGGGACCAATAATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATATATTCAGAGTCATCGTaGAGTCTTGGCTCGGCCGGA +
Preference number: 5 (lower is better)
Translates to: LPATMGETTSNLSIQSNIYSESS*SLGSAG
Trigger: TCCGGCCGAGCCAAGACTCAACGATGACTCTGAATA...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396194.6
CDS-3UTR CAA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTATTCCCATGCATCATGTaGCCCACAAGGCTAATACGC +
Preference number: 5 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLFPCIM*PTRLIR
Trigger: GCGTATTAGCCTTGTGGGCAACATGATGCATGGGAA...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCATTGTTTGCTAAGCCTTaGTTTCCAGCAAGGTCCACA +
Preference number: 5 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSLFAKP*FPARST
Trigger: TGTGGACCTTGCTGGAAACAAAGGCTTAGCAAACAA...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp AGCAGAGCTGTGACATACAAGGGTCAACCAAAGTACTGGAAGTTTTTATGCTATTATTCAGAGTCATCGTaGAGTCCAGAAAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: SRAVTYKGQPKYWKFLCYYSESS*SPENPS
Trigger: ACTGGGATTTTCTGGACTCAACGATGACTCTGAATA...ATAGCATAAAAACTTCCAGTACTTTGGTTGACCCTTGTATGTCACAGCTCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297596.3
CDS-3UTR CAA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCATTGAAGGCCATATTCTaGTTGTTTTTGGCCACGATC +
Preference number: 5 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSLKAIF*LFLATI
Trigger: GATCGTGGCCAAAAACAACAAGAATATGGCCTTCAA...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCAGATTTGGACTTGAGCTaGAAGGCCATATTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSDLDLS*KAIFLL
Trigger: CAACAAGAATATGGCCTTCAAGCTCAAGTCCAAATC...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTAATATTCTTGTTGTTTTaGGCCACGATCTTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLIFLLF*ATILPQ
Trigger: CTGGGGCAAGATCGTGGCCAAAAACAACAAGAATAT...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTAGATTTGGACTTGAGCTaGAAGGCCATATTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLDLDLS*KAIFLL
Trigger: CAACAAGAATATGGCCTTCAAGCTCAAGTCCAAATC...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp AGAAGAAACACATGTGAACACCAAACACATCCTCTAAAGAGTCTTGGGTGTTCAATGTCTTGGTGGGCATaGAACAAAAATTGTTTGCTA +
Preference number: 5 (lower is better)
Translates to: RRNTCEHQTHPLKSLGCSMSWWA*NKNCLL
Trigger: TAGCAAACAATTTTTGTTCAATGCCCACCAAGACAT...TGAACACCCAAGACTCTTTAGAGGATGTGTTTGGTGTTCACATGTGTTTCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTACGCACTAAGTCACTTTaGTTGCCAACCAAAATTATG +
Preference number: 5 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLRTKSL*LPTKIM
Trigger: CATAATTTTGGTTGGCAACAAAAGTGACTTAGTGCG...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATACGCACTAAGTCACTTTaGTTGCCAACCAAAATTATG +
Preference number: 5 (lower is better)
Translates to: LPATMGETTSNLSIQSNIRTKSL*LPTKIM
Trigger: CATAATTTTGGTTGGCAACAAAAGTGACTTAGTGCG...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp CTCCCTGCTACAATGGGGGAAACCACATCTAACTTAAGTATTCAATCTAATATATTTGTTTATGACTCATaGGCCTCAAAGTCACATATC +
Preference number: 5 (lower is better)
Translates to: LPATMGETTSNLSIQSNIFVYDS*ASKSHI
Trigger: GATATGTGACTTTGAGGCCAATGAGTCATAAACAAA...TATATTAGATTGAATACTTAAGTTAGATGTGGTTTCCCCCATTGTAGCAGGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS-3UTR CAA 90 bp TTTTCACAGTTTGATGGAGCAATAATAGTCACGATTCTGATGAGCCTAGTTCTAATGTCTTGGTGGGCATaGAACAAAAATTGTTTGCTA +
Preference number: 5 (lower is better)
Translates to: FSQFDGAIIVTILMSLVLMSWWA*NKNCLL
Trigger: TAGCAAACAATTTTTGTTCAATGCCCACCAAGACAT...TAGAACTAGGCTCATCAGAATCGTGACTATTATTGCTCCATCAAACTGTGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS GCA 72 bp CGCGCTGGGATACCCGGGCCAACGAGCGGGGAGTGCTaGGCTGTGCCCGCCGTCCTTGCCCGCCGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: RAGIPGPTSGEC*AVPAVLARRLQ
Trigger: CTGCAGGCGGCGGGCAAGGACGGCGGGCACAGCGCAGCACTCCCCGCTCGTTGGCCCGGGTATCCCAGCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396194.6
ENST00000523660.1
CDS GCA 72 bp GTCCGCGCTGGGATACCCGGGCCAACGAGCGGGGAGTaGTGCGCTGTGCCCGCCGTCCTTGCCCGCCGCCTG +
Preference number: 6 (lower is better)
Translates to: VRAGIPGPTSGE*CAVPAVLARRL
Trigger: CAGGCGGCGGGCAAGGACGGCGGGCACAGCGCAGCACTCCCCGCTCGTTGGCCCGGGTATCCCAGCGCGGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396194.6
ENST00000523660.1
CDS CCA 72 bp GGCGTCGGGGCGTCAGCGTATCGCGTGGGTCCGCGCTaGGATACCCGGGCCAACGAGCGGGGAGTGCTGCGC +
Preference number: 6 (lower is better)
Translates to: GVGASAYRVGPR*DTRANERGVLR
Trigger: GCGCAGCACTCCCCGCTCGTTGGCCCGGGTATCCCAGCGCGGACCCACGCGATACGCTGACGCCCCGACGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523660.1
CDS CCA 72 bp TCGGCCGGATCGGCGTCGGGGCGTCAGCGTATCGCGTaGGTCCGCGCTGGGATACCCGGGCCAACGAGCGGG +
Preference number: 6 (lower is better)
Translates to: SAGSASGRQRIA*VRAGIPGPTSG
Trigger: CCCGCTCGTTGGCCCGGGTATCCCAGCGCGGACCCACGCGATACGCTGACGCCCCGACGCCGATCCGGCCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523660.1
CDS CAA 72 bp CTCTCTCCCTTCTCCGTCTCGGGCCGTCCCCCTTACTaGGCTCGGCCGGATCGGCGTCGGGGCGTCAGCGTA +
Preference number: 6 (lower is better)
Translates to: LSPFSVSGRPPY*ARPDRRRGVSV
Trigger: TACGCTGACGCCCCGACGCCGATCCGGCCGAGCCAAGTAAGGGGGACGGCCCGAGACGGAGAAGGGAGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000521817.1
CDS CAA 90 bp AAACTCCCACTCTCTCCCTTCTCCGTCTCGGGCCGTCCCCCTTACTaGGCTCGGCCGGATCGGCGTCGGGGCGTCAGCGTATCGCGTGGG +
Preference number: 6 (lower is better)
Translates to: KLPLSPFSVSGRPPY*ARPDRRRGVSVSRG
Trigger: CCCACGCGATACGCTGACGCCCCGACGCCGATCCGGCCGAGCCAAGTAAGGGGGACGGCCCGAGACGGAGAAGGGAGAGAGTGGGAGTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000521817.1
CDS CCA 72 bp TCTCTCCCTTCTCCGTCTCGGGCCGTCCCCCTTACTTaGCTCGGCCGGATCGGCGTCGGGGCGTCAGCGTAT +
Preference number: 6 (lower is better)
Translates to: SLPSPSRAVPLT*LGRIGVGASAY
Trigger: ATACGCTGACGCCCCGACGCCGATCCGGCCGAGCCAAGTAAGGGGGACGGCCCGAGACGGAGAAGGGAGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000521817.1
CDS CCA 72 bp CCTGCCATCAGCTGGGATGCTCCAGCGCTGCTGCTGTaGCTGCATGCCCACAGTGCCCTGGCGCATGGTGAC +
Preference number: 6 (lower is better)
Translates to: PAISWDAPALLL*LHAHSALAHGD
Trigger: GTCACCATGCGCCAGGGCACTGTGGGCATGCAGCCACAGCAGCAGCGCTGGAGCATCCCAGCTGATGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS GCA 72 bp AGATGCCTGCCATCAGCTGGGATGCTCCAGCGCTGCTaGTGTGGCTGCATGCCCACAGTGCCCTGGCGCATG +
Preference number: 6 (lower is better)
Translates to: RCLPSAGMLQRC*CGCMPTVPWRM
Trigger: CATGCGCCAGGGCACTGTGGGCATGCAGCCACAGCAGCAGCGCTGGAGCATCCCAGCTGATGGCAGGCATCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS CAA 72 bp CGGCGGCAGTGGTCCTCAGGGGTAGCAGAATGGCGGTaGCGGTGGCTGTACTGGTGGGGCTCTTTCTGGACC +
Preference number: 6 (lower is better)
Translates to: RRQWSSGVAEWR*RWLYWWGSFWT
Trigger: GGTCCAGAAAGAGCCCCACCAGTACAGCCACCGCAACCGCCATTCTGCTACCCCTGAGGACCACTGCCGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS CCA 72 bp TTCTTCCTGGGCCACCCCTGGTGGAAAGAAGCCCACTaGGGCTGGGACACCTACCTCCCAGCACCTCGCAGT +
Preference number: 6 (lower is better)
Translates to: FFLGHPWWKEAH*GWDTYLPAPRS
Trigger: ACTGCGAGGTGCTGGGAGGTAGGTGTCCCAGCCCCAGTGGGCTTCTTTCCACCAGGGGTGGCCCAGGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521817.1
ENST00000523660.1
CDS CAA 90 bp GACCAGCTTCGGCGGCAGTGGTCCTCAGGGGTAGCAGAATGGCGGTaGCGGTGGCTGTACTGGTGGGGCTCTTTCTGGACCATCAGATGC +
Preference number: 6 (lower is better)
Translates to: DQLRRQWSSGVAEWR*RWLYWWGSFWTIRC
Trigger: GCATCTGATGGTCCAGAAAGAGCCCCACCAGTACAGCCACCGCAACCGCCATTCTGCTACCCCTGAGGACCACTGCCGCCGAAGCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS CCA 72 bp GGGCTCTTTCTGGACCATCAGATGCCTGCCATCAGCTaGGATGCTCCAGCGCTGCTGCTGTGGCTGCATGCC +
Preference number: 6 (lower is better)
Translates to: GLFLDHQMPAIS*DAPALLLWLHA
Trigger: GGCATGCAGCCACAGCAGCAGCGCTGGAGCATCCCAGCTGATGGCAGGCATCTGATGGTCCAGAAAGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS GCA 72 bp TGGCTGTACTGGTGGGGCTCTTTCTGGACCATCAGATaGCTGCCATCAGCTGGGATGCTCCAGCGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: WLYWWGSFWTIR*LPSAGMLQRCC
Trigger: GCAGCAGCGCTGGAGCATCCCAGCTGATGGCAGGCATCTGATGGTCCAGAAAGAGCCCCACCAGTACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS GCA 72 bp CCTTGCTGTCCCGCCGAAGGCGCACCTGTCGCACAATaGCCTCAAACAGCTCCTTCACGTTGTGCTGGACAG +
Preference number: 6 (lower is better)
Translates to: PCCPAEGAPVAQ*PQTAPSRCAGQ
Trigger: CTGTCCAGCACAACGTGAAGGAGCTGTTTGAGGGCATTGTGCGACAGGTGCGCCTTCGGCGGGACAGCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS GCA 72 bp CACCTCGCAGTCGCTGTCCATGCTGTCATGCACACCTaGAAAGATGTTGGCCAGAGTGGACTTGCCCACCCC +
Preference number: 6 (lower is better)
Translates to: HLAVAVHAVMHT*KDVGQSGLAHP
Trigger: GGGGTGGGCAAGTCCACTCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCGACTGCGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523660.1
CDS GCA 72 bp TTTTCTGGTAGGCCAGCCGCCGTTCATTCTTCTCCTTaGTGTCCCGCCGAAGGCGCACCTGTCGCACAATGC +
Preference number: 6 (lower is better)
Translates to: FSGRPAAVHSSP*CPAEGAPVAQC
Trigger: GCATTGTGCGACAGGTGCGCCTTCGGCGGGACAGCAAGGAGAAGAATGAACGGCGGCTGGCCTACCAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS CCA 72 bp GGGGTAGCAGAATGGCGGTTGCGGTGGCTGTACTGGTaGGGCTCTTTCTGGACCATCAGATGCCTGCCATCA +
Preference number: 6 (lower is better)
Translates to: GVAEWRLRWLYW*GSFWTIRCLPS
Trigger: TGATGGCAGGCATCTGATGGTCCAGAAAGAGCCCCACCAGTACAGCCACCGCAACCGCCATTCTGCTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS CCA 72 bp TCAGGGGTAGCAGAATGGCGGTTGCGGTGGCTGTACTaGTGGGGCTCTTTCTGGACCATCAGATGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: SGVAEWRLRWLY*WGSFWTIRCLP
Trigger: TGGCAGGCATCTGATGGTCCAGAAAGAGCCCCACCAGTACAGCCACCGCAACCGCCATTCTGCTACCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS CCA 72 bp CGCTGTCCATGCTGTCATGCACACCTGCAAAGATGTTaGCCAGAGTGGACTTGCCCACCCCCTGCTCCCCTA +
Preference number: 6 (lower is better)
Translates to: RCPCCHAHLQRC*PEWTCPPPAPL
Trigger: TAGGGGAGCAGGGGGTGGGCAAGTCCACTCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523660.1
CDS CAA 72 bp TCATGCACACCTGCAAAGATGTTGGCCAGAGTGGACTaGCCCACCCCCTGCTCCCCTATGAGCACCACTCGG +
Preference number: 6 (lower is better)
Translates to: SCTPAKMLARVD*PTPCSPMSTTR
Trigger: CCGAGTGGTGCTCATAGGGGAGCAGGGGGTGGGCAAGTCCACTCTGGCCAACATCTTTGCAGGTGTGCATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523660.1
CDS GCA 72 bp CCTCCCAGCACCTCGCAGTCGCTGTCCATGCTGTCATaGACACCTGCAAAGATGTTGGCCAGAGTGGACTTG +
Preference number: 6 (lower is better)
Translates to: PPSTSQSLSMLS*TPAKMLARVDL
Trigger: CAAGTCCACTCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCGACTGCGAGGTGCTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521817.1
ENST00000523660.1
CDS TCA 72 bp CCACTCGGTAGTAGGTGTTCCCTGACTCAGAGGAGATaGCTGAGTCTGTGGAGTCAGAGGACCAGCTTCGGC +
Preference number: 6 (lower is better)
Translates to: PLGSRCSLTQRR*LSLWSQRTSFG
Trigger: GCCGAAGCTGGTCCTCTGACTCCACAGACTCAGTCATCTCCTCTGAGTCAGGGAACACCTACTACCGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297596.3
ENST00000396194.6
ENST00000521817.1
ENST00000523433.1
ENST00000523660.1
CDS TCA 72 bp GCTGTGGCTGCATGCCCACAGTGCCCTGGCGCATGGTaGCATTATTCAGAGTCATCGTTGAGTCTTGGCTCG +
Preference number: 6 (lower is better)
Translates to: AVAACPQCPGAW*HYSESSLSLGS
Trigger: CGAGCCAAGACTCAACGATGACTCTGAATAATGTCACCATGCGCCAGGGCACTGTGGGCATGCAGCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396194.6
ENST00000523660.1
CDS TCA 72 bp GCTGTGGCTGCATGCCCACAGTGCCCTGGCGCATGGTaGCATTATTCAGAGTCATCGTTGAGTCATGCTGCC +
Preference number: 6 (lower is better)
Translates to: AVAACPQCPGAW*HYSESSLSHAA
Trigger: GGCAGCATGACTCAACGATGACTCTGAATAATGTCACCATGCGCCAGGGCACTGTGGGCATGCAGCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523433.1
CDS GCA 72 bp TCTCCCAGCACCTCGCAGTCGCTGTCCATGCTGTCATaGACACCTGCAAAGATGTTGGCCAGAGTGGACTTG +
Preference number: 6 (lower is better)
Translates to: SPSTSQSLSMLS*TPAKMLARVDL
Trigger: CAAGTCCACTCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCGACTGCGAGGTGCTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS GCA 72 bp CCAAAATTATGGGAATGTCCTCTGTCTGCCGGGCCCTaGGGAGCTGGATTCGCAGCTCAGATGCCTTCTCGA +
Preference number: 6 (lower is better)
Translates to: PKLWECPLSAGP*GAGFAAQMPSR
Trigger: TCGAGAAGGCATCTGAGCTGCGAATCCAGCTCCGCAGGGCCCGGCAGACAGAGGACATTCCCATAATTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS TCA 72 bp CTCAGATGCCTTCTCGAAGCTCGCTCGGTCTGTGATTaGGTAGACAATCAGGTATGCGTCCCCGACCTGCAT +
Preference number: 6 (lower is better)
Translates to: LRCLLEARSVCD*VDNQVCVPDLH
Trigger: ATGCAGGTCGGGGACGCATACCTGATTGTCTACTCAATCACAGACCGAGCGAGCTTCGAGAAGGCATCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS GCA 72 bp ATGTATCTTCTCCCAGCACCTCGCAGTCGCTGTCCATaGTGTCATGCACACCTGCAAAGATGTTGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: MYLLPAPRSRCP*CHAHLQRCWPE
Trigger: CTCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCGACTGCGAGGTGCTGGGAGAAGATACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS TCA 72 bp GCTGTGGCTGCATGCCCACAGTGCCCTGGCGCATGGTaGCATTATTCAGAGTCATCGTTGAGTCCAGAAAAT +
Preference number: 6 (lower is better)
Translates to: AVAACPQCPGAW*HYSESSLSPEN
Trigger: ATTTTCTGGACTCAACGATGACTCTGAATAATGTCACCATGCGCCAGGGCACTGTGGGCATGCAGCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000521817.1
CDS CAA 72 bp TTGAAGGCCATATTCTTGTTGTTTTTGGCCACGATCTaGCCCCAGAAGCGCCTGGCTTTCCTGGGCATGCTC +
Preference number: 6 (lower is better)
Translates to: LKAIFLLFLATI*PQKRLAFLGML
Trigger: GAGCATGCCCAGGAAAGCCAGGCGCTTCTGGGGCAAGATCGTGGCCAAAAACAACAAGAATATGGCCTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS CAA 90 bp GACTTGAGCTTGAAGGCCATATTCTTGTTGTTTTTGGCCACGATCTaGCCCCAGAAGCGCCTGGCTTTCCTGGGCATGCTCTCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: DLSLKAIFLLFLATI*PQKRLAFLGMLSFL
Trigger: AAGGAAGGAGAGCATGCCCAGGAAAGCCAGGCGCTTCTGGGGCAAGATCGTGGCCAAAAACAACAAGAATATGGCCTTCAAGCTCAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS CAA 90 bp TGGCAGGATTTGGACTTGAGCTTGAAGGCCATATTCTTGTTGTTTTaGGCCACGATCTTGCCCCAGAAGCGCCTGGCTTTCCTGGGCATG +
Preference number: 6 (lower is better)
Translates to: WQDLDLSLKAIFLLF*ATILPQKRLAFLGM
Trigger: CATGCCCAGGAAAGCCAGGCGCTTCTGGGGCAAGATCGTGGCCAAAAACAACAAGAATATGGCCTTCAAGCTCAAGTCCAAATCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS CAA 90 bp AGGTCATGGCAGGATTTGGACTTGAGCTTGAAGGCCATATTCTTGTaGTTTTTGGCCACGATCTTGCCCCAGAAGCGCCTGGCTTTCCTG +
Preference number: 6 (lower is better)
Translates to: RSWQDLDLSLKAIFL*FLATILPQKRLAFL
Trigger: CAGGAAAGCCAGGCGCTTCTGGGGCAAGATCGTGGCCAAAAACAACAAGAATATGGCCTTCAAGCTCAAGTCCAAATCCTGCCATGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS CAA 90 bp GAGAGGTCATGGCAGGATTTGGACTTGAGCTTGAAGGCCATATTCTaGTTGTTTTTGGCCACGATCTTGCCCCAGAAGCGCCTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: ERSWQDLDLSLKAIF*LFLATILPQKRLAF
Trigger: GAAAGCCAGGCGCTTCTGGGGCAAGATCGTGGCCAAAAACAACAAGAATATGGCCTTCAAGCTCAAGTCCAAATCCTGCCATGACCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS CAA 72 bp TTGGACTTGAGCTTGAAGGCCATATTCTTGTTGTTTTaGGCCACGATCTTGCCCCAGAAGCGCCTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: LDLSLKAIFLLF*ATILPQKRLAF
Trigger: GAAAGCCAGGCGCTTCTGGGGCAAGATCGTGGCCAAAAACAACAAGAATATGGCCTTCAAGCTCAAGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS CAA 72 bp CAGGATTTGGACTTGAGCTTGAAGGCCATATTCTTGTaGTTTTTGGCCACGATCTTGCCCCAGAAGCGCCTG +
Preference number: 6 (lower is better)
Translates to: QDLDLSLKAIFL*FLATILPQKRL
Trigger: CAGGCGCTTCTGGGGCAAGATCGTGGCCAAAAACAACAAGAATATGGCCTTCAAGCTCAAGTCCAAATCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS CAA 72 bp AGTACAGAGAGGTCATGGCAGGATTTGGACTTGAGCTaGAAGGCCATATTCTTGTTGTTTTTGGCCACGATC +
Preference number: 6 (lower is better)
Translates to: STERSWQDLDLS*KAIFLLFLATI
Trigger: GATCGTGGCCAAAAACAACAAGAATATGGCCTTCAAGCTCAAGTCCAAATCCTGCCATGACCTCTCTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297596.3
ENST00000396194.6
CDS CCA 72 bp ACCCATTTAGAATTGGAATCTGAAGAATTCCCTTTCTaGCCCAGGATCAACAGATTTTGGTCCTGTCTACAA +
Preference number: 6 (lower is better)
Translates to: THLELESEEFPF*PRINRFWSCLQ
Trigger: TTGTAGACAGGACCAAAATCTGTTGATCCTGGGCCAGAAAGGGAATTCTTCAGATTCCAATTCTAAATGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523660.1