Pregenerated sensors for GDPD3 (Homo sapiens)
Ensembl gene IDs: ENSG00000102886Ensembl transcript IDs: ENST00000360688.3, ENST00000406256.8, ENST00000565704.5, ENST00000566434.5, ENST00000566613.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACAGGAGACCTCGAGGCTTCTGGACTTAGGAGGTCCGGGCAGCTaGTCCATGGTTGTCCAGGTAGTGCCGCAGGGCTGTGGGATAATC | + |
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Preference number: 1 (lower is better) Translates to: KQETSRLLDLGGPGS*SMVVQVVPQGCGII Trigger: GATTATCCCACAGCCCTGCGGCACTACCTGGACAACCATGGACCAGCTGCCCGGACCTCCTAAGTCCAGAAGCCTCGAGGTCTCCTGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566434.5 ENST00000566613.1 |
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| 3UTR CCA 90 bp | TCATTAAGGCACCAAAAGACCACCTGCCCGAGTGATGCAGCTAGTTaGCAGCAGAGTGGGACCGGAACCCTGCTGCCAGGTCTGTGTGCG | + |
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Preference number: 1 (lower is better) Translates to: SLRHQKTTCPSDAAS*QQSGTGTLLPGLCA Trigger: CGCACACAGACCTGGCAGCAGGGTTCCGGTCCCACTCTGCTGCCAACTAGCTGCATCACTCGGGCAGGTGGTCTTTTGGTGCCTTAATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| 3UTR GCA 90 bp | GCTGCTTCAAAATCCGACTCTTCATTAAGGCACCAAAAGACCACCTaGCCGAGTGATGCAGCTAGTTGGCAGCAGAGTGGGACCGGAACC | + |
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Preference number: 1 (lower is better) Translates to: AASKSDSSLRHQKTT*PSDAASWQQSGTGT Trigger: GGTTCCGGTCCCACTCTGCTGCCAACTAGCTGCATCACTCGGGCAGGTGGTCTTTTGGTGCCTTAATGAAGAGTCGGATTTTGAAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| 3UTR GCA 90 bp | TGTGGGATAATCCGTTATGACGCCAGTGGCTCCCACGCTGAAGGCTaGTTCAAAATCCGACTCTTCATTAAGGCACCAAAAGACCACCTG | + |
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Preference number: 1 (lower is better) Translates to: CGIIRYDASGSHAEG*FKIRLFIKAPKDHL Trigger: CAGGTGGTCTTTTGGTGCCTTAATGAAGAGTCGGATTTTGAAGCAGCCTTCAGCGTGGGAGCCACTGGCGTCATAACGGATTATCCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| 3UTR CCA 72 bp | ACCTCGAGGCTTCTGGACTTAGGAGGTCCGGGCAGCTaGTCCATGGTTGTCCAGGTAGTGCCGCAGGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: TSRLLDLGGPGS*SMVVQVVPQGC Trigger: ACAGCCCTGCGGCACTACCTGGACAACCATGGACCAGCTGCCCGGACCTCCTAAGTCCAGAAGCCTCGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566434.5 ENST00000566613.1 |
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| 3UTR CCA 72 bp | CACCAAAAGACCACCTGCCCGAGTGATGCAGCTAGTTaGCAGCAGAGTGGGACCGGAACCCTGCTGCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: HQKTTCPSDAAS*QQSGTGTLLPG Trigger: ACCTGGCAGCAGGGTTCCGGTCCCACTCTGCTGCCAACTAGCTGCATCACTCGGGCAGGTGGTCTTTTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| 3UTR GCA 72 bp | AAATCCGACTCTTCATTAAGGCACCAAAAGACCACCTaGCCGAGTGATGCAGCTAGTTGGCAGCAGAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: KSDSSLRHQKTT*PSDAASWQQSG Trigger: CCCACTCTGCTGCCAACTAGCTGCATCACTCGGGCAGGTGGTCTTTTGGTGCCTTAATGAAGAGTCGGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| 3UTR GCA 72 bp | ATCCGTTATGACGCCAGTGGCTCCCACGCTGAAGGCTaGTTCAAAATCCGACTCTTCATTAAGGCACCAAAA | + |
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Preference number: 3 (lower is better) Translates to: IRYDASGSHAEG*FKIRLFIKAPK Trigger: TTTTGGTGCCTTAATGAAGAGTCGGATTTTGAAGCAGCCTTCAGCGTGGGAGCCACTGGCGTCATAACGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS-3UTR CCA 90 bp | GGAGGTCCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGCCGCAGGGCTGTGGGTGTGTGCGGTGGAAGTaGTGGTCACGGCCTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: GGPGSWSMVVQVVPQGCGCVRWK*WSRPHL Trigger: CAGGTGAGGCCGTGACCACCACTTCCACCGCACACA...CCCACAGCCCTGCGGCACTACCTGGACAACCATGGACCAGCTGCCCGGACCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS-3UTR CCA 90 bp | GACTTAGGAGGTCCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGCCGCAGGGCGGAGGTCCGGGCAGCTaGTCCATGGTTGTCCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: DLGGPGSWSMVVQVVPQGGGPGS*SMVVQV Trigger: TACCTGGACAACCATGGACCAGCTGCCCGGACCTCC...GCCCTGCGGCACTACCTGGACAACCATGGACCAGCTGCCCGGACCTCCTAAGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566434.5 ENST00000566613.1 |
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| CDS-3UTR GCA 90 bp | GAGGCTTCTGGACTTAGGAGGTCCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGGTCACGGCCTCACCTaGACCCCTCGCTCCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: EASGLRRSGQLVHGCPGSGHGLT*TPRSSK Trigger: CTTGGAGGAGCGAGGGGTGCAGGTGAGGCCGTGACC...ACTACCTGGACAACCATGGACCAGCTGCCCGGACCTCCTAAGTCCAGAAGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS-3UTR TCA 90 bp | TTAGGAGGTCCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGCCGCAGGGCTGTCAGTGGCTCCCACGCTaGAGGCTGCTTCAAAATCCG | + |
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Preference number: 4 (lower is better) Translates to: LGGPGSWSMVVQVVPQGCQWLPR*RLLQNP Trigger: CGGATTTTGAAGCAGCCTTCAGCGTGGGAGCCACTG...ACAGCCCTGCGGCACTACCTGGACAACCATGGACCAGCTGCCCGGACCTCCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566434.5 ENST00000566613.1 |
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| CDS-3UTR CCA 90 bp | GGAGACCTCGAGGCTTCTGGACTTAGGAGGTCCGGGCAGCTGGTCCATGGTTGTGGAGGTCCGGGCAGCTaGTCCATGGTTGTCCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: GDLEASGLRRSGQLVHGCGGPGS*SMVVQV Trigger: TACCTGGACAACCATGGACCAGCTGCCCGGACCTCC...ACAACCATGGACCAGCTGCCCGGACCTCCTAAGTCCAGAAGCCTCGAGGTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566434.5 ENST00000566613.1 |
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| CDS-3UTR CCA 90 bp | TCGAGGCTTCTGGACTTAGGAGGTCCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGCGGTGGAAGTGGTaGTCACGGCCTCACCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SRLLDLGGPGSWSMVVQVVRWKW*SRPHLH Trigger: GTGCAGGTGAGGCCGTGACCACCACTTCCACCGCAC...TACCTGGACAACCATGGACCAGCTGCCCGGACCTCCTAAGTCCAGAAGCCTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS-3UTR CCA 90 bp | TCCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGCCGCAGGGCTGTGGGATAATCAGGTCTGTGTGCGGTaGAAGTGGTGGTCACGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SGQLVHGCPGSAAGLWDNQVCVR*KWWSRP Trigger: AGGCCGTGACCACCACTTCCACCGCACACAGACCTG...ATTATCCCACAGCCCTGCGGCACTACCTGGACAACCATGGACCAGCTGCCCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS-3UTR TCA 90 bp | CTTCTGGACTTAGGAGGTCCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGCCGCAGTGGCTCCCACGCTaGAGGCTGCTTCAAAATCCG | + |
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Preference number: 4 (lower is better) Translates to: LLDLGGPGSWSMVVQVVPQWLPR*RLLQNP Trigger: CGGATTTTGAAGCAGCCTTCAGCGTGGGAGCCACTG...CGGCACTACCTGGACAACCATGGACCAGCTGCCCGGACCTCCTAAGTCCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566434.5 ENST00000566613.1 |
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| CDS-3UTR TCA 90 bp | ACCTCGAGGCTTCTGGACTTAGGAGGTCCGGGCAGCTGGTCCATGGTTGTCCAGTGGGATAATCCGTTATaGCGCCAGTGGCTCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: TSRLLDLGGPGSWSMVVQWDNPL*RQWLPR Trigger: GCGTGGGAGCCACTGGCGTCATAACGGATTATCCCA...CTGGACAACCATGGACCAGCTGCCCGGACCTCCTAAGTCCAGAAGCCTCGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566434.5 ENST00000566613.1 |
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| CDS-3UTR TCA 90 bp | CTTCTGGACTTAGGAGGTCCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGCCGTGGGATAATCCGTTATaGCGCCAGTGGCTCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: LLDLGGPGSWSMVVQVVPWDNPL*RQWLPR Trigger: GCGTGGGAGCCACTGGCGTCATAACGGATTATCCCA...CGGCACTACCTGGACAACCATGGACCAGCTGCCCGGACCTCCTAAGTCCAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566434.5 ENST00000566613.1 |
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| CDS-3UTR GCA 90 bp | GGTCCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGCCGCAGGGCTGTGGGATATCCCACGCTGAAGGCTaGTTCAAAATCCGACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GPGSWSMVVQVVPQGCGISHAEG*FKIRLF Trigger: GAAGAGTCGGATTTTGAAGCAGCCTTCAGCGTGGGA...TATCCCACAGCCCTGCGGCACTACCTGGACAACCATGGACCAGCTGCCCGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566434.5 ENST00000566613.1 |
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| CDS-3UTR CCA 90 bp | GCTTCTGGACTTAGGAGGTCCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGCCAGTGATGCAGCTAGTTaGCAGCAGAGTGGGACCGGA | + |
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Preference number: 4 (lower is better) Translates to: ASGLRRSGQLVHGCPGSASDAAS*QQSGTG Trigger: TCCGGTCCCACTCTGCTGCCAACTAGCTGCATCACT...GGCACTACCTGGACAACCATGGACCAGCTGCCCGGACCTCCTAAGTCCAGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS-3UTR GCA 90 bp | TCATTAAGGCACCAAAAGACCACCTGCCCGAGTGATGCAGCTAGTTGGCAGCAGGCTGCCAGGTCTGTGTaGGGTGGAAGTGGTGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: SLRHQKTTCPSDAASWQQAARSV*GGSGGH Trigger: GTGACCACCACTTCCACCGCACACAGACCTGGCAGC...CTGCTGCCAACTAGCTGCATCACTCGGGCAGGTGGTCTTTTGGTGCCTTAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS-3UTR CCA 90 bp | CCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGCCGCAGGGCTGTGGGATAATCACCACAGCCAATAACTaGTTCAGGCAAGAGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PGSWSMVVQVVPQGCGIITTANN*FRQEQE Trigger: TTCCTGCTCTTGCCTGAACCAGTTATTGGCTGTGGT...GATTATCCCACAGCCCTGCGGCACTACCTGGACAACCATGGACCAGCTGCCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566434.5 ENST00000566613.1 |
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| CDS-3UTR TCA 90 bp | TTAGGAGGTCCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGCCGCAGGGCTGTTCAGACTCTTCCTCATaGTCAGCCATTTCGAAACCA | + |
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Preference number: 4 (lower is better) Translates to: LGGPGSWSMVVQVVPQGCSDSSS*SAISKP Trigger: TGGTTTCGAAATGGCTGATCATGAGGAAGAGTCTGA...ACAGCCCTGCGGCACTACCTGGACAACCATGGACCAGCTGCCCGGACCTCCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS-3UTR CCA 90 bp | CTTCTGGACTTAGGAGGTCCGGGCAGCTGGTCCATGGTTGTCCAGGTAGTGCCGGCAAGAGCAGGAAAATaGGAAATAGGTCCTGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LLDLGGPGSWSMVVQVVPARAGK*EIGPVD Trigger: ATCAACAGGACCTATTTCCCATTTTCCTGCTCTTGC...CGGCACTACCTGGACAACCATGGACCAGCTGCCCGGACCTCCTAAGTCCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566613.1 |
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| CDS-3UTR GCA 90 bp | CCAGTGGCTCCCACGCTGAAGGCTGCTTCAAAATCCGACTCTTCATTAAGGCACTCCCACGCTGAAGGCTaGTTCAAAATCCGACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PVAPTLKAASKSDSSLRHSHAEG*FKIRLF Trigger: GAAGAGTCGGATTTTGAAGCAGCCTTCAGCGTGGGA...GTGCCTTAATGAAGAGTCGGATTTTGAAGCAGCCTTCAGCGTGGGAGCCACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS-3UTR CCA 90 bp | GTGGCTCCCACGCTGAAGGCTGCTTCAAAATCCGACTCTTCATTAAGGCACCAAACCACAGCCAATAACTaGTTCAGGCAAGAGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VAPTLKAASKSDSSLRHQTTANN*FRQEQE Trigger: TTCCTGCTCTTGCCTGAACCAGTTATTGGCTGTGGT...TTGGTGCCTTAATGAAGAGTCGGATTTTGAAGCAGCCTTCAGCGTGGGAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS GCA 90 bp | TCTCCAGCAGCTCTCCAGATCCTCCTCGGTGGGCCCCCAGGCGGATaGGGAAGGTGGGAGCCCTGGGCGTGTGCAGCAGATGAGGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: SPAALQILLGGPPGG*GRWEPWACAADEAG Trigger: GCCGGCCTCATCTGCTGCACACGCCCAGGGCTCCCACCTTCCGCATCCGCCTGGGGGCCCACCGAGGAGGATCTGGAGAGCTGCTGGAGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS CCA 90 bp | ATCCTCCTCGGTGGGCCCCCAGGCGGATGCGGAAGGTGGGAGCCCTaGGCGTGTGCAGCAGATGAGGCCGGCGCAGGAAGAAGATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: ILLGGPPGGCGRWEP*ACAADEAGAGRRWR Trigger: TCTCCATCTTCTTCCTGCGCCGGCCTCATCTGCTGCACACGCCCAGGGCTCCCACCTTCCGCATCCGCCTGGGGGCCCACCGAGGAGGAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS CCA 90 bp | GGCAGCAGAGTGGGACCGGAACCCTGCTGCCAGGTCTGTGTGCGGTaGAAGTGGTGGTCACGGCCTCACCTGCACCCCTCGCTCCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: GSRVGPEPCCQVCVR*KWWSRPHLHPSLLQ Trigger: TTGGAGGAGCGAGGGGTGCAGGTGAGGCCGTGACCACCACTTCCACCGCACACAGACCTGGCAGCAGGGTTCCGGTCCCACTCTGCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS CCA 90 bp | GTGGGACCGGAACCCTGCTGCCAGGTCTGTGTGCGGTGGAAGTGGTaGTCACGGCCTCACCTGCACCCCTCGCTCCTCCAAGTGTCGGAT | + |
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Preference number: 5 (lower is better) Translates to: VGPEPCCQVCVRWKW*SRPHLHPSLLQVSD Trigger: ATCCGACACTTGGAGGAGCGAGGGGTGCAGGTGAGGCCGTGACCACCACTTCCACCGCACACAGACCTGGCAGCAGGGTTCCGGTCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS GCA 90 bp | GCCCGAGTGATGCAGCTAGTTGGCAGCAGAGTGGGACCGGAACCCTaGTGCCAGGTCTGTGTGCGGTGGAAGTGGTGGTCACGGCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: ARVMQLVGSRVGPEP*CQVCVRWKWWSRPH Trigger: GTGAGGCCGTGACCACCACTTCCACCGCACACAGACCTGGCAGCAGGGTTCCGGTCCCACTCTGCTGCCAACTAGCTGCATCACTCGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS TCA 90 bp | ATGTGCAGGCCACCTCCAGGGGGCGCCAGTCACCCAGCTAGGAAGTaGATGGCGTCCCTTGCTGTGATGCAGTCCACGACCTGCACACCC | + |
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Preference number: 5 (lower is better) Translates to: MCRPPPGGASHPARK*MASLAVMQSTTCTP Trigger: GGGTGTGCAGGTCGTGGACTGCATCACAGCAAGGGACGCCATTCACTTCCTAGCTGGGTGACTGGCGCCCCCTGGAGGTGGCCTGCACAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360688.3 |
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| CDS GCA 90 bp | CGAGTGATGCAGCTAGTTGGCAGCAGAGTGGGACCGGAACCCTGCTaGCAGGTCTGTGTGCGGTGGAAGTGGTGGTCACGGCCTCACCTG | + |
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Preference number: 5 (lower is better) Translates to: RVMQLVGSRVGPEPC*QVCVRWKWWSRPHL Trigger: CAGGTGAGGCCGTGACCACCACTTCCACCGCACACAGACCTGGCAGCAGGGTTCCGGTCCCACTCTGCTGCCAACTAGCTGCATCACTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS CCA 90 bp | GAGCCCTGGGCGTGTGCAGCAGATGAGGCCGGCGCAGGAAGAAGATaGAGAGCATGGCATAGCTGCCCAGGGCAGGGAGGGCATAGTACA | + |
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Preference number: 5 (lower is better) Translates to: EPWACAADEAGAGRR*RAWHSCPGQGGHST Trigger: TGTACTATGCCCTCCCTGCCCTGGGCAGCTATGCCATGCTCTCCATCTTCTTCCTGCGCCGGCCTCATCTGCTGCACACGCCCAGGGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS CCA 90 bp | GCAGCCTGGGCAGGGGCAGATACACTCACTTCTCCATGGCCTCCATaGTGTTCTCCAGCAGCTCTCCAGATCCTCCTCGGTGGGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: AAWAGADTLTSPWPP*CSPAALQILLGGPP Trigger: TGGGGGCCCACCGAGGAGGATCTGGAGAGCTGCTGGAGAACACCATGGAGGCCATGGAGAAGTGAGTGTATCTGCCCCTGCCCAGGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360688.3 |
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| CDS GCA 90 bp | GCTGCCAGGTCTGTGTGCGGTGGAAGTGGTGGTCACGGCCTCACCTaGACCCCTCGCTCCTCCAAGTGTCGGATCAGACTCTTCCTCATG | + |
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Preference number: 5 (lower is better) Translates to: AARSVCGGSGGHGLT*TPRSSKCRIRLFLM Trigger: CATGAGGAAGAGTCTGATCCGACACTTGGAGGAGCGAGGGGTGCAGGTGAGGCCGTGACCACCACTTCCACCGCACACAGACCTGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS TCA 90 bp | AGGTTCTCATCATGTGACACCACCACCACTCTGTCCCGTGTCAGCTaGCAGTCGAGCTCCAGGAGGTCCGAGCGCTGGGCCATGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: RFSSCDTTTTLSRVS*QSSSRRSERWAMEL Trigger: CAGCTCCATGGCCCAGCGCTCGGACCTCCTGGAGCTCGACTGTCAGCTGACACGGGACAGAGTGGTGGTGGTGTCACATGATGAGAACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360688.3 |
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| CDS CCA 90 bp | GCGTGTGCAGCAGATGAGGCCGGCGCAGGAAGAAGATGGAGAGCATaGCATAGCTGCCCAGGGCAGGGAGGGCATAGTACAGCAAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: ACAADEAGAGRRWRA*HSCPGQGGHSTAKG Trigger: GCCTTTTGCTGTACTATGCCCTCCCTGCCCTGGGCAGCTATGCCATGCTCTCCATCTTCTTCCTGCGCCGGCCTCATCTGCTGCACACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS TCA 90 bp | AGGTTCTCATCATGTGACACCACCACCACTCTGTCCCGTGTCAGCTaGCAGTCGAGCTCCAGGAGGTCCGAGCGCTGGGCCATGGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: RFSSCDTTTTLSRVS*QSSSRRSERWAMEF Trigger: GAACTCCATGGCCCAGCGCTCGGACCTCCTGGAGCTCGACTGTCAGCTGACACGGGACAGAGTGGTGGTGGTGTCACATGATGAGAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406256.8 |
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| CDS CCA 90 bp | CCTCACATGGCAGCCTGGGCAGGGGCAGATACACTCACTTCTCCATaGCCTCCATGGTGTTCTCCAGCAGCTCTCCAGATCCTCCTCGGT | + |
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Preference number: 5 (lower is better) Translates to: PHMAAWAGADTLTSP*PPWCSPAALQILLG Trigger: ACCGAGGAGGATCTGGAGAGCTGCTGGAGAACACCATGGAGGCCATGGAGAAGTGAGTGTATCTGCCCCTGCCCAGGCTGCCATGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360688.3 |
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| CDS CCA 90 bp | AGGTCCTCGAAGTCCAGGCTGCCCACATCCCTGTTTAGGCCCGACTaGCGGCACAGGTTCTCATCATGTGACACCACCACCACTCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: RSSKSRLPTSLFRPD*RHRFSSCDTTTTLS Trigger: GGACAGAGTGGTGGTGGTGTCACATGATGAGAACCTGTGCCGCCAGTCGGGCCTAAACAGGGATGTGGGCAGCCTGGACTTCGAGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS GCA 90 bp | TGGGTGTCCTTGGAAACCTCTGGAACAGGTCCTCCAGACGAACCATaGGCCGGTCTGACCCGTGAGCAAAGTGGCCTGGAGAGAAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: WVSLETSGTGPPDEP*AGLTREQSGLERSK Trigger: TTTACTTCTCTCCAGGCCACTTTGCTCACGGGTCAGACCGGCGCATGGTTCGTCTGGAGGACCTGTTCCAGAGGTTTCCAAGGACACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS GCA 90 bp | AAGGGCAGCAGTAGGTCTCTATGGGGACACGCCACCCAGCCATCTTaGCCACCTCACCATTTCGAAACCACAGCCAATAACTGGTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: KGSSRSLWGHATQPS*PPHHFETTANNWFR Trigger: CCTGAACCAGTTATTGGCTGTGGTTTCGAAATGGTGAGGTGGGCAAGATGGCTGGGTGGCGTGTCCCCATAGAGACCTACTGCTGCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565704.5 |
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| CDS CCA 90 bp | GAGCTCTTCGTTCTTCCCTTTGATCTCTACGCTCATGGGTGTCCTTaGAAACCTCTGGAACAGGTCCTCCAGACGAACCATGCGCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: ELFVLPFDLYAHGCP*KPLEQVLQTNHAPV Trigger: GACCGGCGCATGGTTCGTCTGGAGGACCTGTTCCAGAGGTTTCCAAGGACACCCATGAGCGTAGAGATCAAAGGGAAGAACGAAGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS GCA 90 bp | TGTGGGATAATCCGTTATGACGCCAGTGGCTCCCACGCTGAAGGCTaGTTCAAAATCCGACTCTTCATTAAGGCACCAAAAGACCACCAT | + |
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Preference number: 5 (lower is better) Translates to: CGIIRYDASGSHAEG*FKIRLFIKAPKDHH Trigger: ATGGTGGTCTTTTGGTGCCTTAATGAAGAGTCGGATTTTGAAGCAGCCTTCAGCGTGGGAGCCACTGGCGTCATAACGGATTATCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566613.1 |
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| CDS CCA 72 bp | GTGGGACCGGAACCCTGCTGCCAGGTCTGTGTGCGGTaGAAGTGGTGGTCACGGCCTCACCTGCACCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: VGPEPCCQVCVR*KWWSRPHLHPS Trigger: CGAGGGGTGCAGGTGAGGCCGTGACCACCACTTCCACCGCACACAGACCTGGCAGCAGGGTTCCGGTCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS TCA 72 bp | CCACCTCCAGGGGGCGCCAGTCACCCAGCTAGGAAGTaGATGGCGTCCCTTGCTGTGATGCAGTCCACGACC | + |
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Preference number: 6 (lower is better) Translates to: PPPGGASHPARK*MASLAVMQSTT Trigger: GGTCGTGGACTGCATCACAGCAAGGGACGCCATTCACTTCCTAGCTGGGTGACTGGCGCCCCCTGGAGGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360688.3 |
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| CDS TCA 72 bp | TCATGTGACACCACCACCACTCTGTCCCGTGTCAGCTaGCAGTCGAGCTCCAGGAGGTCCGAGCGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SCDTTTTLSRVS*QSSSRRSERWA Trigger: GGCCCAGCGCTCGGACCTCCTGGAGCTCGACTGTCAGCTGACACGGGACAGAGTGGTGGTGGTGTCACATGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS GCA 72 bp | CAGCTAGTTGGCAGCAGAGTGGGACCGGAACCCTGCTaGCAGGTCTGTGTGCGGTGGAAGTGGTGGTCACGG | + |
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Preference number: 6 (lower is better) Translates to: QLVGSRVGPEPC*QVCVRWKWWSR Trigger: CCGTGACCACCACTTCCACCGCACACAGACCTGGCAGCAGGGTTCCGGTCCCACTCTGCTGCCAACTAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS GCA 72 bp | TCTCCTTGTAGAGGGGCAGGTCCTCGAAGTCCAGGCTaGCCACATCCCTGTTTAGGCCCGACTGGCGGCACA | + |
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Preference number: 6 (lower is better) Translates to: SPCRGAGPRSPG*PHPCLGPTGGT Trigger: TGTGCCGCCAGTCGGGCCTAAACAGGGATGTGGGCAGCCTGGACTTCGAGGACCTGCCCCTCTACAAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS GCA 72 bp | TCTGTGTGCGGTGGAAGTGGTGGTCACGGCCTCACCTaGACCCCTCGCTCCTCCAAGTGTCGGATCAGACTC | + |
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Preference number: 6 (lower is better) Translates to: SVCGGSGGHGLT*TPRSSKCRIRL Trigger: GAGTCTGATCCGACACTTGGAGGAGCGAGGGGTGCAGGTGAGGCCGTGACCACCACTTCCACCGCACACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS GCA 72 bp | ATGCAGCTAGTTGGCAGCAGAGTGGGACCGGAACCCTaGTGCCAGGTCTGTGTGCGGTGGAAGTGGTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: MQLVGSRVGPEP*CQVCVRWKWWS Trigger: TGACCACCACTTCCACCGCACACAGACCTGGCAGCAGGGTTCCGGTCCCACTCTGCTGCCAACTAGCTGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566434.5 |
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| CDS CCA 72 bp | GCAGATGAGGCCGGCGCAGGAAGAAGATGGAGAGCATaGCATAGCTGCCCAGGGCAGGGAGGGCATAGTACA | + |
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Preference number: 6 (lower is better) Translates to: ADEAGAGRRWRA*HSCPGQGGHST Trigger: TGTACTATGCCCTCCCTGCCCTGGGCAGCTATGCCATGCTCTCCATCTTCTTCCTGCGCCGGCCTCATCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS CCA 72 bp | TGCAGTCCACGACCTGCACACCCTCACATGGCAGCCTaGGCAGGGGCAGATACACTCACTTCTCCATGGCCT | + |
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Preference number: 6 (lower is better) Translates to: CSPRPAHPHMAA*AGADTLTSPWP Trigger: AGGCCATGGAGAAGTGAGTGTATCTGCCCCTGCCCAGGCTGCCATGTGAGGGTGTGCAGGTCGTGGACTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360688.3 |
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| CDS CCA 72 bp | GCAGCCTGGGCAGGGGCAGATACACTCACTTCTCCATaGCCTCCATGGTGTTCTCCAGCAGCTCTCCAGATC | + |
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Preference number: 6 (lower is better) Translates to: AAWAGADTLTSP*PPWCSPAALQI Trigger: GATCTGGAGAGCTGCTGGAGAACACCATGGAGGCCATGGAGAAGTGAGTGTATCTGCCCCTGCCCAGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360688.3 |
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| CDS CCA 72 bp | AAGTCCAGGCTGCCCACATCCCTGTTTAGGCCCGACTaGCGGCACAGGTTCTCATCATGTGACACCACCACC | + |
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Preference number: 6 (lower is better) Translates to: KSRLPTSLFRPD*RHRFSSCDTTT Trigger: GGTGGTGGTGTCACATGATGAGAACCTGTGCCGCCAGTCGGGCCTAAACAGGGATGTGGGCAGCCTGGACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS TCA 72 bp | CTGGAACAGGTCCTCCAGACGAACCATGCGCCGGTCTaGCCCGTGAGCAAAGTGGCCTGGAGAGAAGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: LEQVLQTNHAPV*PVSKVAWREVN Trigger: GTTTACTTCTCTCCAGGCCACTTTGCTCACGGGTCAGACCGGCGCATGGTTCGTCTGGAGGACCTGTTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS TCA 72 bp | AGTAGGAAAGCAGCACCCAGAATCCTCGGCTTATTGTaGAGGACAGGGGCATCTCGGGGTTGGCAGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SRKAAPRILGLL*RTGASRGWQPC Trigger: GCAAGGCTGCCAACCCCGAGATGCCCCTGTCCTTCACAATAAGCCGAGGATTCTGGGTGCTGCTTTCCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS GCA 72 bp | AGTAGGTCTCTATGGGGACACGCCACCCAGCCATCTTaGCCACCTCACCATTTCGAAACCACAGCCAATAAC | + |
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Preference number: 6 (lower is better) Translates to: SRSLWGHATQPS*PPHHFETTANN Trigger: GTTATTGGCTGTGGTTTCGAAATGGTGAGGTGGGCAAGATGGCTGGGTGGCGTGTCCCCATAGAGACCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565704.5 |
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| CDS CAA 90 bp | CTCACCAAGCCTGCTATCTCACGGATGAGCTCTTCGTTCTTCCCTTaGATCTCTACGCTCATGGGTGTCCTTGGAAACCTCTGGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: LTKPAISRMSSSFFP*ISTLMGVLGNLWNR Trigger: CCTGTTCCAGAGGTTTCCAAGGACACCCATGAGCGTAGAGATCAAAGGGAAGAACGAAGAGCTCATCCGTGAGATAGCAGGCTTGGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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| CDS CAA 72 bp | CCTGCTATCTCACGGATGAGCTCTTCGTTCTTCCCTTaGATCTCTACGCTCATGGGTGTCCTTGGAAACCTC | + |
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Preference number: 6 (lower is better) Translates to: PAISRMSSSFFP*ISTLMGVLGNL Trigger: GAGGTTTCCAAGGACACCCATGAGCGTAGAGATCAAAGGGAAGAACGAAGAGCTCATCCGTGAGATAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360688.3 ENST00000406256.8 |
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