RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GDNF (Homo sapiens)

Ensembl gene IDs: ENSG00000168621

Ensembl transcript IDs: ENST00000326524.7, ENST00000344622.8, ENST00000381826.8, ENST00000427982.5, ENST00000510177.5, ENST00000515058.5, ENST00000620847.1

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCTGGTAGACCCTACCTCTGGAAGGCCCCTGTGTCTCCCGGGCTaGACTGGGCAGCCAGCATATTCTCGGGAGGGCAGTGGGTGGGCA +
Preference number: 1 (lower is better)
Translates to: DLVDPTSGRPLCLPG*TGQPAYSREGSGWA
Trigger: TGCCCACCCACTGCCCTCCCGAGAATATGCTGGCTGCCCAGTGCAGCCCGGGAGACACAGGGGCCTTCCAGAGGTAGGGTCTACCAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 90 bp GGTAGACCCTACCTCTGGAAGGCCCCTGTGTCTCCCGGGCTGCACTaGGCAGCCAGCATATTCTCGGGAGGGCAGTGGGTGGGCAGGGAT +
Preference number: 1 (lower is better)
Translates to: GRPYLWKAPVSPGLH*AASIFSGGQWVGRD
Trigger: ATCCCTGCCCACCCACTGCCCTCCCGAGAATATGCTGGCTGCCCAGTGCAGCCCGGGAGACACAGGGGCCTTCCAGAGGTAGGGTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 90 bp TGTCAGGTGTTTGGGTATATAGGAGCAGCAGCTGTTGACCCCCGGTaGCAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGG +
Preference number: 1 (lower is better)
Translates to: CQVFGYIGAAAVDPR*QPRGCTGPGRPYLW
Trigger: CCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAGCTGCTGCTCCTATATACCCAAACACCTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 90 bp AGGTTGAAGCCTGGGAACAGTGGCCATCGCACTGCCAAGGTTCTCTaGATGGGACAGATGCCCCTGGGGCCACATCCAAATTGTGCTCCA +
Preference number: 1 (lower is better)
Translates to: RLKPGNSGHRTAKVL*MGQMPLGPHPNCAP
Trigger: TGGAGCACAATTTGGATGTGGCCCCAGGGGCATCTGTCCCATTCAGAGAACCTTGGCAGTGCGATGGCCACTGTTCCCAGGCTTCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 90 bp CCTCCTCCTCCTCCTCCTCTTCTTCTTCCTCCTCCTCCGCCTCCTTaGTCCTCATCTTCCATTCTGGGCAAACATTTCCTGGGAACCTTG +
Preference number: 1 (lower is better)
Translates to: PPPPPPLLLPPPPPP*SSSSILGKHFLGTL
Trigger: CAAGGTTCCCAGGAAATGTTTGCCCAGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGGAGGAAGAAGAAGAGGAGGAGGAGGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 90 bp ATCCAGAGGGCTGTTTTCTCTCTCTCCTGTCCAGTTGTCTGTAGCTaGATCTCCCTCTACCAGGCTCCCATGATGGCTGCCTTCCTCCTC +
Preference number: 1 (lower is better)
Translates to: IQRAVFSLSCPVVCS*ISLYQAPMMAAFLL
Trigger: GAGGAGGAAGGCAGCCATCATGGGAGCCTGGTAGAGGGAGATCCAGCTACAGACAACTGGACAGGAGAGAGAGAAAACAGCCCTCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 90 bp GTATCAGCTGAAATGGTGGCAATAGCCAACCAGGAACATCAGCCCTaGGCTTCTAGTGACATCGGCTGCCATCCTGGAGAATCCAGAGGG +
Preference number: 1 (lower is better)
Translates to: VSAEMVAIANQEHQP*ASSDIGCHPGESRG
Trigger: CCCTCTGGATTCTCCAGGATGGCAGCCGATGTCACTAGAAGCTCAGGGCTGATGTTCCTGGTTGGCTATTGCCACCATTTCAGCTGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 90 bp CTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTaGTGGTGGACTGTATCAGCTGAAATGGTGGCAATAGCCAACCAG +
Preference number: 1 (lower is better)
Translates to: LVWFKCIHRNRAGNQ*WWTVSAEMVAIANQ
Trigger: CTGGTTGGCTATTGCCACCATTTCAGCTGATACAGTCCACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 90 bp ACTGTTTCGAGCAGTCTGAATTCTCAGCAAGATCCCAAGACAGTGTaGGAGGGAAGGCCTTTCCTCCATTTCCCAGGCGAGCAAGGGGAG +
Preference number: 1 (lower is better)
Translates to: TVSSSLNSQQDPKTV*EGRPFLHFPGEQGE
Trigger: CTCCCCTTGCTCGCCTGGGAAATGGAGGAAAGGCCTTCCCTCTCACACTGTCTTGGGATCTTGCTGAGAATTCAGACTGCTCGAAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 90 bp TGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCATGGAGGAGGTaGCTGTTCCCGCCCCTATGCTTCCTCCTGCTCCAACCTCTTTTT +
Preference number: 1 (lower is better)
Translates to: CVGCPINSQSRAWRR*LFPPLCFLLLQPLF
Trigger: AAAAAGAGGTTGGAGCAGGAGGAAGCATAGGGGCGGGAACAGCCACCTCCTCCATGCCCTAGATTGTGAATTTATCGGGCAGCCAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 90 bp TGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCATaGAGGAGGTGGCTGTTCCCGCCCCTATGCTTCCTCCTGCTCCAA +
Preference number: 1 (lower is better)
Translates to: CHTCVGCPINSQSRA*RRWLFPPLCFLLLQ
Trigger: TTGGAGCAGGAGGAAGCATAGGGGCGGGAACAGCCACCTCCTCCATGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR GCA 90 bp CGACATTTCTGTTCAGCAATGGAGCAAGGAAGAAATAAAGTCAAGTaGCAGTGGTCTCTGCACGCTGCTCCAGGAAAGGGGGCTTGCCTG +
Preference number: 1 (lower is better)
Translates to: RHFCSAMEQGRNKVK*QWSLHAAPGKGACL
Trigger: CAGGCAAGCCCCCTTTCCTGGAGCAGCGTGCAGAGACCACTGGCACTTGACTTTATTTCTTCCTTGCTCCATTGCTGAACAGAAATGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 90 bp TTCTGTTCAGCAATGGAGCAAGGAAGAAATAAAGTCAAGTGCCAGTaGTCTCTGCACGCTGCTCCAGGAAAGGGGGCTTGCCTGAGATGC +
Preference number: 1 (lower is better)
Translates to: FCSAMEQGRNKVKCQ*SLHAAPGKGACLRC
Trigger: GCATCTCAGGCAAGCCCCCTTTCCTGGAGCAGCGTGCAGAGACCACTGGCACTTGACTTTATTTCTTCCTTGCTCCATTGCTGAACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 90 bp CCCTGGTGTCTTCGGACACATGAAAACAAATCACAGGAGATACACTaGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGT +
Preference number: 1 (lower is better)
Translates to: PWCLRTHENKSQEIH*FGSSASTATAPVIS
Trigger: ACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCCTGTGATTTGTTTTCATGTGTCCGAAGACACCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 90 bp AGGAACAACACCAGGATCTCTGTTTCCCTGGTGTCTTCGGACACATaGAAACAAATCACAGGAGATACACTGGTTTGGTTCAAGTGCATC +
Preference number: 1 (lower is better)
Translates to: RNNTRISVSLVSSDT*KQITGDTLVWFKCI
Trigger: GATGCACTTGAACCAAACCAGTGTATCTCCTGTGATTTGTTTTCATGTGTCCGAAGACACCAGGGAAACAGAGATCCTGGTGTTGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCGTGGTCTCTGCACGCTaGTCCAGGAAAGGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTVVSAR*SRKGGL
Trigger: CAAGCCCCCTTTCCTGGAGCAGCGTGCAGAGACCAC...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGACTGGTTTGGTTCAAGTaGATCCACCGCAACCGCGCC +
Preference number: 2 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGLVWFK*IHRNRA
Trigger: GGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAG...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGAAGTGCCAGTGGTCTCTaGACGCTGCTCCAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGSASGL*TLLQER
Trigger: CCTTTCCTGGAGCAGCGTGCAGAGACCACTGGCACT...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGACAGGAACATCAGCCCTaGGCTTCTAGTGACATCGGC +
Preference number: 2 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGQEHQP*ASSDIG
Trigger: GCCGATGTCACTAGAAGCTCAGGGCTGATGTTCCTG...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGACGCGCCGGTAATCAGTaGTGGTGGACTGTATCAGCT +
Preference number: 2 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGRAGNQ*WWTVSA
Trigger: AGCTGATACAGTCCACCATCACTGATTACCGGCGCG...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTTCTCTGGTCACTGGTaGCCACGCATCAACGGAGCT +
Preference number: 2 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTFSGHW*PRINGA
Trigger: AGCTCCGTTGATGCGTGGTCACCAGTGACCAGAGAA...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCGTGGGTGGGCAGGGATaGAGGGAGTCGGTAGAACGG +
Preference number: 2 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSVGGQG*RESVER
Trigger: CCGTTCTACCGACTCCCTCCATCCCTGCCCACCCAC...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCTGTGTCTCCCGGGCTaGACTGGGCAGCCAGCATAT +
Preference number: 2 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSLCLPG*TGQPAY
Trigger: ATATGCTGGCTGCCCAGTGCAGCCCGGGAGACACAG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCCCAGTTGTCTGTAGCTaGATCTCCCTCTACCAGGCT +
Preference number: 2 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTPVVCS*ISLYQA
Trigger: AGCCTGGTAGAGGGAGATCCAGCTACAGACAACTGG...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCGGTAGACCCTACCTCTaGAAGGCCCCTGTGTCTCCC +
Preference number: 2 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSGRPYL*KAPVSP
Trigger: GGGAGACACAGGGGCCTTCCAGAGGTAGGGTCTACC...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCAGTGCCAGTGGTCTCTaGACGCTGCTCCAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSSASGL*TLLQER
Trigger: CCTTTCCTGGAGCAGCGTGCAGAGACCACTGGCACT...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCGTGGACTGTATCAGCTaGAATGGTGGCAATAGCCAA +
Preference number: 2 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTVDCIS*NGGNSQ
Trigger: TTGGCTATTGCCACCATTTCAGCTGATACAGTCCAC...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCGCGCCGGTAATCAGTaGTGGTGGACTGTATCAGCT +
Preference number: 2 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSRAGNQ*WWTVSA
Trigger: AGCTGATACAGTCCACCATCACTGATTACCGGCGCG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAGTAAACCAACAGGCCTaGGGGGCTCTCCCTGCCCGG +
Preference number: 2 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRVNQQA*GALPAR
Trigger: CCGGGCAGGGAGAGCCCCTCAGGCCTGTTGGTTTAC...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCTTCTCTGGTCACTGGTaGCCACGCATCAACGGAGCT +
Preference number: 2 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSFSGHW*PRINGA
Trigger: AGCTCCGTTGATGCGTGGTCACCAGTGACCAGAGAA...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCGAAAGGGGGCTTGCCTaGGATGCTCCACAAATAAAA +
Preference number: 2 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTERGLA*DAPQIK
Trigger: TTTTATTTGTGGAGCATCTCAGGCAAGCCCCCTTTC...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCCTCCTCCGCCTCCTTaGTCCTCATCTTCCATTCTG +
Preference number: 2 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSPPPPP*SSSSIL
Trigger: CAGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCCACCCCACACACCGTaGTGGAAATCAATCACCAAC +
Preference number: 2 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSPPHTP*WKSITN
Trigger: GTTGGTGATTGATTTCCATCACGGTGTGTGGGGTGG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAAGGAGCAGCAGCTGTTaGCCCCCGGTGACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: GLVCHTCVGCPINSQSRARSSSC*PPVTAQ
Trigger: CTGGGCTGTCACCGGGGGTCAACAGCTGCTGCTCCT...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CAA 90 bp TCCTCCTCCTCCTCCTCCTCTTCTTCTTCCTCCTCCTCCGCCTCCTaGGTCCTCATCTTCCATTCTGGGCAAACATTTCCTGGGAACCTT +
Preference number: 2 (lower is better)
Translates to: SSSSSSSSSSSSSAS*VLIFHSGQTFPGNL
Trigger: AAGGTTCCCAGGAAATGTTTGCCCAGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGGAGGAAGAAGAAGAGGAGGAGGAGGAGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCAGAACGGCAGCTACCTaGCAGCATTGTCGACATTAC +
Preference number: 2 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSRTAAT*QHCRHY
Trigger: GTAATGTCGACAATGCTGTCAGGTAGCTGCCGTTCT...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCGAAAGGGGGCTTGCCTaGGATGCTCCACAAATAAAA +
Preference number: 2 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSERGLA*DAPQIK
Trigger: TTTTATTTGTGGAGCATCTCAGGCAAGCCCCCTTTC...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAGTGGTCTCTGCACGCTaGTCCAGGAAAGGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAVVSAR*SRKGGL
Trigger: CAAGCCCCCTTTCCTGGAGCAGCGTGCAGAGACCAC...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCATCTCCCGGGCTGCACTaGGCAGCCAGCATATTCTCG +
Preference number: 2 (lower is better)
Translates to: GLVCHTCVGCPINSQSRASPGLH*AASIFS
Trigger: CGAGAATATGCTGGCTGCCCAGTGCAGCCCGGGAGA...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAGGTAGACCCTACCTCTaGAAGGCCCCTGTGTCTCCC +
Preference number: 2 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAGRPYL*KAPVSP
Trigger: GGGAGACACAGGGGCCTTCCAGAGGTAGGGTCTACC...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAGTAAACCAACAGGCCTaGGGGGCTCTCCCTGCCCGG +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSVNQQA*GALPAR
Trigger: CCGGGCAGGGAGAGCCCCTCAGGCCTGTTGGTTTAC...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGACTATATTTCTGTATCTaGAACAGATGCATTGCATCG +
Preference number: 2 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGLYFCI*NRCIAS
Trigger: CGATGCAATGCATCTGTTTCAGATACAGAAATATAG...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGACCTACTAAAAGGAACTaGACCTTTTCTACATATGGT +
Preference number: 2 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGPTKRN*TFSTYG
Trigger: ACCATATGTAGAAAAGGTTCAGTTCCTTTTAGTAGG...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGACCTCCTCCGCCTCCTTaGTCCTCATCTTCCATTCTG +
Preference number: 2 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRPPPPP*SSSSIL
Trigger: CAGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGG...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGACCACCCCACACACCGTaGTGGAAATCAATCACCAAC +
Preference number: 2 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRPPHTP*WKSITN
Trigger: GTTGGTGATTGATTTCCATCACGGTGTGTGGGGTGG...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCACCTCCTCCGCCTCCTTaGTCCTCATCTTCCATTCTG +
Preference number: 2 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAPPPPP*SSSSIL
Trigger: CAGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGG...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCACCACCCCACACACCGTaGTGGAAATCAATCACCAAC +
Preference number: 2 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAPPHTP*WKSITN
Trigger: GTTGGTGATTGATTTCCATCACGGTGTGTGGGGTGG...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTGGAGATACACTGGTTTaGTTCAAGTGCATCCACCGC +
Preference number: 2 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGGDTLV*FKCIHR
Trigger: GCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAGGAGATACACTGGTTTaGTTCAAGTGCATCCACCGC +
Preference number: 2 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRGDTLV*FKCIHR
Trigger: GCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CAA 90 bp CTTCTTCCCACCCCACACACCGTGATGGAAATCAATCACCAACCGTaGGCAAAAATGCTGGTTGTAGTAAACCTCGGGCCTCAACTTTCA +
Preference number: 2 (lower is better)
Translates to: LLPTPHTVMEINHQP*AKMLVVVNLGPQLS
Trigger: TGAAAGTTGAGGCCCGAGGTTTACTACAACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTGGGAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTGTGGACTGTATCAGCTaGAATGGTGGCAATAGCCAA +
Preference number: 2 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGVDCIS*NGGNSQ
Trigger: TTGGCTATTGCCACCATTTCAGCTGATACAGTCCAC...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCTATGTCTCCACTGAGTaGCAGAAAAATAAACCTCTT +
Preference number: 2 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSYVSTE*QKNKPL
Trigger: AAGAGGTTTATTTTTCTGTCACTCAGTGGAGACATA...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCTATATTTCTGTATCTaGAACAGATGCATTGCATCG +
Preference number: 2 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSLYFCI*NRCIAS
Trigger: CGATGCAATGCATCTGTTTCAGATACAGAAATATAG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCACTGGTCTCAAACTCCTaGGTTCAAGAGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: GLVCHTCVGCPINSQSRALVSNS*VQEILP
Trigger: TGGGAGGATCTCTTGAACCCAGGAGTTTGAGACCAG...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCACAGGAACATCAGCCCTaGGCTTCTAGTGACATCGGC +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSQEHQP*ASSDIG
Trigger: GCCGATGTCACTAGAAGCTCAGGGCTGATGTTCCTG...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAGGGGCTTGCCTGAGATaGTCCACAAATAAAAATTGG +
Preference number: 2 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRGACLR*STNKNW
Trigger: CCAATTTTTATTTGTGGAGCATCTCAGGCAAGCCCC...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGGTGGTCTCTGCACGCTaGTCCAGGAAAGGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWVVSAR*SRKGGL
Trigger: CAAGCCCCCTTTCCTGGAGCAGCGTGCAGAGACCAC...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCACATCGGCTGCCATCCTaGAGAATCCAGAGGGCTGTT +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSHRLPS*RIQRAV
Trigger: AACAGCCCTCTGGATTCTCCAGGATGGCAGCCGATG...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGATCACAGGAGATACACTaGTTTGGTTCAAGTGCATCC +
Preference number: 2 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRSQEIH*FGSSAS
Trigger: GGATGCACTTGAACCAAACCAGTGTATCTCCTGTGA...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAGGATCTCTGTTTCCCTaGTGTCTTCGGACACATGAA +
Preference number: 2 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGGSLFP*CLRTHE
Trigger: TTCATGTGTCCGAAGACACCAGGGAAACAGAGATCC...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAGAGGCTCCATGTGTGTaGCTGTGGCTGGTCCCAATA +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSEAPCV*LWLVPI
Trigger: TATTGGGACCAGCCACAGCCACACACATGGAGCCTC...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTGTGTCTTCGGACACATaGAAACAAATCACAGGAGAT +
Preference number: 2 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGVSSDT*KQITGD
Trigger: ATCTCCTGTGATTTGTTTTCATGTGTCCGAAGACAC...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCACCAGGAAAGGGGGCTTaGCTGAGATGCTCCACAAAT +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSPGKGA*LRCSTN
Trigger: ATTTGTGGAGCATCTCAGGCAAGCCCCCTTTCCTGG...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAAATAAAGTCAAGTaGCAGTGGTCTCTGCACGCT +
Preference number: 2 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGRNKVK*QWSLHA
Trigger: AGCGTGCAGAGACCACTGGCACTTGACTTTATTTCT...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCACCTCATCTTCCATTCTaGGCAAACATTTCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAPHLPF*ANISWE
Trigger: TTCCCAGGAAATGTTTGCCCAGAATGGAAGATGAGG...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGCATCGGCTGCCATCCTaGAGAATCCAGAGGGCTGTT +
Preference number: 2 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGHRLPS*RIQRAV
Trigger: AACAGCCCTCTGGATTCTCCAGGATGGCAGCCGATG...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCACCATGTGTGTGGCTGTaGCTGGTCCCAATATGGCTT +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSPCVWL*LVPIWL
Trigger: AAGCCATATTGGGACCAGCCACAGCCACACACATGG...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTAGGGCATGGAGGAGGTaGCTGTTCCCGCCCCTATGC +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGRAWRR*LFPPLC
Trigger: GCATAGGGGCGGGAACAGCCACCTCCTCCATGCCCT...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTCAGGAACATCAGCCCTaGGCTTCTAGTGACATCGGC +
Preference number: 2 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFQEHQP*ASSDIG
Trigger: GCCGATGTCACTAGAAGCTCAGGGCTGATGTTCCTG...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAGTGTCTTCGGACACATaGAAACAAATCACAGGAGAT +
Preference number: 2 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAVSSDT*KQITGD
Trigger: ATCTCCTGTGATTTGTTTTCATGTGTCCGAAGACAC...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTCCCTTCTCAGCCATCTaGTCCCCAGGGAGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGPFSAI*SPGSCQ
Trigger: CTGACAGCTCCCTGGGGAGCAGATGGCTGAGAAGGG...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCATCACTTAGGCTGGAGTaGAGTGGCATGATCACAGCT +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSSLRLE*SGMITA
Trigger: AGCTGTGATCATGCCACTGCACTCCAGCCTAAGTGA...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGCCAGTTGTCTGTAGCTaGATCTCCCTCTACCAGGCT +
Preference number: 2 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGPVVCS*ISLYQA
Trigger: AGCCTGGTAGAGGGAGATCCAGCTACAGACAACTGG...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTCATCGGCTGCCATCCTaGAGAATCCAGAGGGCTGTT +
Preference number: 2 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFHRLPS*RIQRAV
Trigger: AACAGCCCTCTGGATTCTCCAGGATGGCAGCCGATG...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGAAAGTCAAGTGCCAGTaGTCTCTGCACGCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGKVKCQ*SLHAAP
Trigger: TGGAGCAGCGTGCAGAGACCACTGGCACTTGACTTT...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTCCTCCTTCAGCCTCTTaGGTAGCTGGGACCACAGGT +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGPPSAS*VAGTTG
Trigger: ACCTGTGGTCCCAGCTACTCAAGAGGCTGAAGGAGG...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTCTGGTTTGGTTCAAGTaGATCCACCGCAACCGCGCC +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGLVWFK*IHRNRA
Trigger: GGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAG...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGCCAGGAAAGGGGGCTTaGCTGAGATGCTCCACAAAT +
Preference number: 2 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWPGKGA*LRCSTN
Trigger: ATTTGTGGAGCATCTCAGGCAAGCCCCCTTTCCTGG...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTCTGTTCCCGCCCCTATaGTTCCTCCTGCTCCAACCT +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGLFPPL*FLLLQP
Trigger: AGGTTGGAGCAGGAGGAAGCATAGGGGCGGGAACAG...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAGCCACATCCAAATTGTaGTCCACGAATGACTGGATG +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSATSKL*STNDWM
Trigger: CATCCAGTCATTCGTGGAGCACAATTTGGATGTGGC...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGGGAGATACACTGGTTTaGTTCAAGTGCATCCACCGC +
Preference number: 2 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGGDTLV*FKCIHR
Trigger: GCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAGGATCTCTGTTTCCCTaGTGTCTTCGGACACATGAA +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSGSLFP*CLRTHE
Trigger: TTCATGTGTCCGAAGACACCAGGGAAACAGAGATCC...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTCCAAGGTTCTCTGAATaGGACAGATGCCCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGPRFSE*DRCPWG
Trigger: GCCCCAGGGGCATCTGTCCCATTCAGAGAACCTTGG...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAATTAAAACCTGCTTGTaGTGTGTAGGTGATGCCGGG +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSIKTCL*CVGDAG
Trigger: CCCGGCATCACCTACACACCACAAGCAGGTTTTAAT...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGATCCCAAGACAGTGTaGGAGGGAAGGCCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGDPKTV*EGRPFL
Trigger: GAGGAAAGGCCTTCCCTCTCACACTGTCTTGGGATC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTACTGCCAAGGTTCTCTaGATGGGACAGATGCCCCTG +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGTAKVL*MGQMPL
Trigger: CAGGGGCATCTGTCCCATTCAGAGAACCTTGGCAGT...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCATCACAGGAGATACACTaGTTTGGTTCAAGTGCATCC +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSSQEIH*FGSSAS
Trigger: GGATGCACTTGAACCAAACCAGTGTATCTCCTGTGA...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGAGGCTCCATGTGTGTaGCTGTGGCTGGTCCCAATA +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGEAPCV*LWLVPI
Trigger: TATTGGGACCAGCCACAGCCACACACATGGAGCCTC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCATTTGTCACCTTTCTTTaGATTTTGCGAGCACATATA +
Preference number: 2 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAFVTFL*ILRAHI
Trigger: TATATGTGCTCGCAAAATGCAAAGAAAGGTGACAAA...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTCCAGTTGTCTGTAGCTaGATCTCCCTCTACCAGGCT +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGPVVCS*ISLYQA
Trigger: AGCCTGGTAGAGGGAGATCCAGCTACAGACAACTGG...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTAAAGTCAAGTGCCAGTaGTCTCTGCACGCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGKVKCQ*SLHAAP
Trigger: TGGAGCAGCGTGCAGAGACCACTGGCACTTGACTTT...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTTGGCTGGTCCCAATATaGCTTCCTCAGCACCCTTCT +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGWLVPI*LPQHPS
Trigger: AGAAGGGTGCTGAGGAAGCCATATTGGGACCAGCCA...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCACATACATGTGTTGGCTaGCCGATAAATTCACAATCT +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSHTCVG*PINSQS
Trigger: AGATTGTGAATTTATCGGGCAGCCAACACATGTATG...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGCCTCATCTTCCATTCTaGGCAAACATTTCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWPHLPF*ANISWE
Trigger: TTCCCAGGAAATGTTTGCCCAGAATGGAAGATGAGG...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAAACTTTACCCTTTTGTaGATTTGGTGGAGCAACTTG +
Preference number: 2 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSNFTLL*IWWSNL
Trigger: CAAGTTGCTCCACCAAATCCACAAAAGGGTAAAGTT...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGTATGTCTCCACTGAGTaGCAGAAAAATAAACCTCTT +
Preference number: 2 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGYVSTE*QKNKPL
Trigger: AAGAGGTTTATTTTTCTGTCACTCAGTGGAGACATA...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGCTATATTTCTGTATCTaGAACAGATGCATTGCATCG +
Preference number: 2 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGLYFCI*NRCIAS
Trigger: CGATGCAATGCATCTGTTTCAGATACAGAAATATAG...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGTGTCTTCGGACACATaGAAACAAATCACAGGAGAT +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGVSSDT*KQITGD
Trigger: ATCTCCTGTGATTTGTTTTCATGTGTCCGAAGACAC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR TCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTTATGTCTCCACTGAGTaGCAGAAAAATAAACCTCTT +
Preference number: 2 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFYVSTE*QKNKPL
Trigger: AAGAGGTTTATTTTTCTGTCACTCAGTGGAGACATA...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGCTTCCATTAAAACCTaGTTGTGGTGTGTAGGTGAT +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGASIKT*LWCVGD
Trigger: ATCACCTACACACCACAAGCAGGTTTTAATGGAAGC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGTGTCATACATGTGTTaGCTGCCCGATAAATTCACA +
Preference number: 2 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGVSYMC*LPDKFT
Trigger: TGTGAATTTATCGGGCAGCCAACACATGTATGACAC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR GCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGTTTGTCACCTTTCTTTaGATTTTGCGAGCACATATA +
Preference number: 2 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWFVTFL*ILRAHI
Trigger: TATATGTGCTCGCAAAATGCAAAGAAAGGTGACAAA...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCCTCCTCCGCCTCCTaGGTCCTCATCTTCCATTCT +
Preference number: 3 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTSSSAS*VLIFHS
Trigger: AGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGGA...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGATCCTCCTCCGCCTCCTaGGTCCTCATCTTCCATTCT +
Preference number: 3 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGSSSAS*VLIFHS
Trigger: AGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGGA...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGACTCTCTCCTGTCCAGTaGTCTGTAGCTGGATCTCCC +
Preference number: 3 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGLSPVQ*SVAGSP
Trigger: GGGAGATCCAGCTACAGACAACTGGACAGGAGAGAG...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCCAGGAAAGGGGGCTaGCCTGAGATGCTCCACAAA +
Preference number: 3 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTSRKGG*PEMLHK
Trigger: TTTGTGGAGCATCTCAGGCAAGCCCCCTTTCCTGGA...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCCATTTCCTGGGAACCTaGGTCCCTTTCTTTGCACTG +
Preference number: 3 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTHFLGT*VPFFAL
Trigger: CAGTGCAAAGAAAGGGACCAAGGTTCCCAGGAAATG...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 72 bp TTTGGGTATATAGGAGCAGCAGCTGTTGACCCCCGGTaGCAGCCCAGGGGTTGTACAGGACCTGGTAGACCC +
Preference number: 3 (lower is better)
Translates to: FGYIGAAAVDPR*QPRGCTGPGRP
Trigger: GGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAGCTGCTGCTCCTATATACCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 72 bp CTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCTGTTaGCCCCCGGTGACAGCCCAGGGGTTGTACAGGACC +
Preference number: 3 (lower is better)
Translates to: LSGVWVYRSSSC*PPVTAQGLYRT
Trigger: GGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAGCTGCTGCTCCTATATACCCAAACACCTGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 72 bp CCTGGGAACAGTGGCCATCGCACTGCCAAGGTTCTCTaGATGGGACAGATGCCCCTGGGGCCACATCCAAAT +
Preference number: 3 (lower is better)
Translates to: PGNSGHRTAKVL*MGQMPLGPHPN
Trigger: ATTTGGATGTGGCCCCAGGGGCATCTGTCCCATTCAGAGAACCTTGGCAGTGCGATGGCCACTGTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 72 bp GGAACAGTGGCCATCGCACTGCCAAGGTTCTCTGAATaGGACAGATGCCCCTGGGGCCACATCCAAATTGTG +
Preference number: 3 (lower is better)
Translates to: GTVAIALPRFSE*DRCPWGHIQIV
Trigger: CACAATTTGGATGTGGCCCCAGGGGCATCTGTCCCATTCAGAGAACCTTGGCAGTGCGATGGCCACTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTCCTCCTCCGCCTCCTaGGTCCTCATCTTCCATTCT +
Preference number: 3 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQSSSAS*VLIFHS
Trigger: AGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGGA...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 72 bp GCTGTTTTCTCTCTCTCCTGTCCAGTTGTCTGTAGCTaGATCTCCCTCTACCAGGCTCCCATGATGGCTGCC +
Preference number: 3 (lower is better)
Translates to: AVFSLSCPVVCS*ISLYQAPMMAA
Trigger: GGCAGCCATCATGGGAGCCTGGTAGAGGGAGATCCAGCTACAGACAACTGGACAGGAGAGAGAGAAAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 72 bp TGCCCGATAAATTCACAATCTAGGGCATGGAGGAGGTaGCTGTTCCCGCCCCTATGCTTCCTCCTGCTCCAA +
Preference number: 3 (lower is better)
Translates to: CPINSQSRAWRR*LFPPLCFLLLQ
Trigger: TTGGAGCAGGAGGAAGCATAGGGGCGGGAACAGCCACCTCCTCCATGCCCTAGATTGTGAATTTATCGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 72 bp TGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCATaGAGGAGGTGGCTGTTCCCGCCCCTATGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: CVGCPINSQSRA*RRWLFPPLCFL
Trigger: GAGGAAGCATAGGGGCGGGAACAGCCACCTCCTCCATGCCCTAGATTGTGAATTTATCGGGCAGCCAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGAATCAATCACCAACCGTaGGCAAAAATGCTGGTTGTA +
Preference number: 3 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGINHQP*AKMLVV
Trigger: TACAACCAGCATTTTTGCCAACGGTTGGTGATTGAT...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCATCAATCACCAACCGTaGGCAAAAATGCTGGTTGTA +
Preference number: 3 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTINHQP*AKMLVV
Trigger: TACAACCAGCATTTTTGCCAACGGTTGGTGATTGAT...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCAGCTACCTGACAGCATaGTCGACATTACTTTTAGGT +
Preference number: 3 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTSYLTA*STLLLG
Trigger: ACCTAAAAGTAATGTCGACAATGCTGTCAGGTAGCT...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 72 bp CCTCCTCCTCTTCTTCTTCCTCCTCCTCCGCCTCCTTaGTCCTCATCTTCCATTCTGGGCAAACATTTCCTG +
Preference number: 3 (lower is better)
Translates to: PPPLLLPPPPPP*SSSSILGKHFL
Trigger: CAGGAAATGTTTGCCCAGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGGAGGAAGAAGAAGAGGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 72 bp CCTGGGGCCACATCCAAATTGTGCTCCACGAATGACTaGATGGCTGGGGTTTGTCACTGTTTCGAGCAGTCT +
Preference number: 3 (lower is better)
Translates to: PGATSKLCSTND*MAGVCHCFEQS
Trigger: AGACTGCTCGAAACAGTGACAAACCCCAGCCATCCAGTCATTCGTGGAGCACAATTTGGATGTGGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 72 bp GAAATGGTGGCAATAGCCAACCAGGAACATCAGCCCTaGGCTTCTAGTGACATCGGCTGCCATCCTGGAGAA +
Preference number: 3 (lower is better)
Translates to: EMVAIANQEHQP*ASSDIGCHPGE
Trigger: TTCTCCAGGATGGCAGCCGATGTCACTAGAAGCTCAGGGCTGATGTTCCTGGTTGGCTATTGCCACCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGACTCTCTCCTGTCCAGTaGTCTGTAGCTGGATCTCCC +
Preference number: 3 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRLSPVQ*SVAGSP
Trigger: GGGAGATCCAGCTACAGACAACTGGACAGGAGAGAG...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCTCTGAAACAGATGCATaGCATCGAGTAGCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSSETDA*HRVASL
Trigger: CAGAGAAGCTACTCGATGCAATGCATCTGTTTCAGA...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCGAAAAGCATGGACCCTaGTTCCCAATTCAAATTTCC +
Preference number: 3 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSEKHGP*FPIQIS
Trigger: GGAAATTTGAATTGGGAACAAGGGTCCATGCTTTTC...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 72 bp TTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTaGTGGTGGACTGTATCAGCTGAAATGGTGGCAATA +
Preference number: 3 (lower is better)
Translates to: FKCIHRNRAGNQ*WWTVSAEMVAI
Trigger: TATTGCCACCATTTCAGCTGATACAGTCCACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 72 bp CTTCGGACACATGAAAACAAATCACAGGAGATACACTaGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCG +
Preference number: 3 (lower is better)
Translates to: LRTHENKSQEIH*FGSSASTATAP
Trigger: CGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCCTGTGATTTGTTTTCATGTGTCCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CCA 72 bp GGGCCACATCCAAATTGTGCTCCACGAATGACTGGATaGCTGGGGTTTGTCACTGTTTCGAGCAGTCTGAAT +
Preference number: 3 (lower is better)
Translates to: GPHPNCAPRMTG*LGFVTVSSSLN
Trigger: ATTCAGACTGCTCGAAACAGTGACAAACCCCAGCCATCCAGTCATTCGTGGAGCACAATTTGGATGTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGACCTTGGTCCCTTTCTTaGCACTGTAGCAGGAATGCA +
Preference number: 3 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRPWSLS*HCSRNA
Trigger: TGCATTCCTGCTACAGTGCAAAGAAAGGGACCAAGG...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGACCTTGGTCCCTTTCTTaGCACTGTAGCAGGAATGCA +
Preference number: 3 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGPWSLS*HCSRNA
Trigger: TGCATTCCTGCTACAGTGCAAAGAAAGGGACCAAGG...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGGAGATACACTGGTTaGGTTCAAGTGCATCCACCG +
Preference number: 3 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGRRYTG*VQVHPP
Trigger: CGGTGGATGCACTTGAACCAAACCAGTGTATCTCCT...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 72 bp AGATGCATTGCATCGAGTAGCTTCTCTGGTCACTGGTaGCCACGCATCAACGGAGCTGGTTATGTAACATCT +
Preference number: 3 (lower is better)
Translates to: RCIASSSFSGHW*PRINGAGYVTS
Trigger: AGATGTTACATAACCAGCTCCGTTGATGCGTGGTCACCAGTGACCAGAGAAGCTACTCGATGCAATGCATCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR GCA 72 bp GTAATACAGGGCCTAGTGTGTCATACATGTGTTGGCTaGCCGATAAATTCACAATCTAGGGCATGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: VIQGLVCHTCVG*PINSQSRAWRR
Trigger: CCTCCTCCATGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCCCTGTATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCATCCAGGAAAGGGGGCTaGCCTGAGATGCTCCACAAA +
Preference number: 3 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSSRKGG*PEMLHK
Trigger: TTTGTGGAGCATCTCAGGCAAGCCCCCTTTCCTGGA...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCACAGGGTCTCCCTATGTaGCCCAAGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSQGLPM*PKLVSN
Trigger: GTTTGAGACCAGCTTGGGCAACATAGGGAGACCCTG...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGCTCTCTCCTGTCCAGTaGTCTGTAGCTGGATCTCCC +
Preference number: 3 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGLSPVQ*SVAGSP
Trigger: GGGAGATCCAGCTACAGACAACTGGACAGGAGAGAG...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAATCAATCACCAACCGTaGGCAAAAATGCTGGTTGTA +
Preference number: 3 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRINHQP*AKMLVV
Trigger: TACAACCAGCATTTTTGCCAACGGTTGGTGATTGAT...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAGAAAAGCATGGACCCTaGTTCCCAATTCAAATTTCC +
Preference number: 3 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGEKHGP*FPIQIS
Trigger: GGAAATTTGAATTGGGAACAAGGGTCCATGCTTTTC...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAAGCTACCTGACAGCATaGTCGACATTACTTTTAGGT +
Preference number: 3 (lower is better)
Translates to: GLVCHTCVGCPINSQSRASYLTA*STLLLG
Trigger: ACCTAAAAGTAATGTCGACAATGCTGTCAGGTAGCT...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR TCA 72 bp ACCAGGATCTCTGTTTCCCTGGTGTCTTCGGACACATaGAAACAAATCACAGGAGATACACTGGTTTGGTTC +
Preference number: 3 (lower is better)
Translates to: TRISVSLVSSDT*KQITGDTLVWF
Trigger: GAACCAAACCAGTGTATCTCCTGTGATTTGTTTTCATGTGTCCGAAGACACCAGGGAAACAGAGATCCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAACCTTTCTTTGCATTTaGCGAGCACATATACTTTGG +
Preference number: 3 (lower is better)
Translates to: GLVCHTCVGCPINSQSRATFLCI*RAHILW
Trigger: CCAAAGTATATGTGCTCGCAAAATGCAAAGAAAGGT...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGATTTTGTCACCTTTCTTaGCATTTTGCGAGCACATAT +
Preference number: 3 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRFCHLS*HFASTY
Trigger: ATATGTGCTCGCAAAATGCAAAGAAAGGTGACAAAA...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTCCTTGGTCCCTTTCTTaGCACTGTAGCAGGAATGCA +
Preference number: 3 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFPWSLS*HCSRNA
Trigger: TGCATTCCTGCTACAGTGCAAAGAAAGGGACCAAGG...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTCATTTCCTGGGAACCTaGGTCCCTTTCTTTGCACTG +
Preference number: 3 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFHFLGT*VPFFAL
Trigger: CAGTGCAAAGAAAGGGACCAAGGTTCCCAGGAAATG...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGAGATACACTGGTTaGGTTCAAGTGCATCCACCG +
Preference number: 3 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWRRYTG*VQVHPP
Trigger: CGGTGGATGCACTTGAACCAAACCAGTGTATCTCCT...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCATCTGAAACAGATGCATaGCATCGAGTAGCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSSETDA*HRVASL
Trigger: CAGAGAAGCTACTCGATGCAATGCATCTGTTTCAGA...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCATTTTGTCACCTTTCTTaGCATTTTGCGAGCACATAT +
Preference number: 3 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAFCHLS*HFASTY
Trigger: ATATGTGCTCGCAAAATGCAAAGAAAGGTGACAAAA...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAAAGAATTTGGGTATTTaGGGGGAAGGGGATCAGATG +
Preference number: 3 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSKNLGI*GEGDQM
Trigger: CATCTGATCCCCTTCCCCCAAAATACCCAAATTCTT...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAACAAACTTTACCCTTTaGTGGATTTGGTGGAGCAAC +
Preference number: 3 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSTNFTL*WIWWSN
Trigger: GTTGCTCCACCAAATCCACAAAAGGGTAAAGTTTGT...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTAGGAGATACACTGGTTaGGTTCAAGTGCATCCACCG +
Preference number: 3 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGRRYTG*VQVHPP
Trigger: CGGTGGATGCACTTGAACCAAACCAGTGTATCTCCT...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGTCTGAAACAGATGCATaGCATCGAGTAGCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWSETDA*HRVASL
Trigger: CAGAGAAGCTACTCGATGCAATGCATCTGTTTCAGA...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGGAAAAGCATGGACCCTaGTTCCCAATTCAAATTTCC +
Preference number: 3 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGEKHGP*FPIQIS
Trigger: GGAAATTTGAATTGGGAACAAGGGTCCATGCTTTTC...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGACCTTTCTTTGCATTTaGCGAGCACATATACTTTGG +
Preference number: 3 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWTFLCI*RAHILW
Trigger: CCAAAGTATATGTGCTCGCAAAATGCAAAGAAAGGT...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR-3UTR CAA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGGAAATACCTTCAGGTTaGTGTTTAATCATGAGCACA +
Preference number: 3 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWEIPSG*CLIMST
Trigger: TGTGCTCATGATTAAACACAAACCTGAAGGTATTTC...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGAGTAAACCAACAGGCCTaGGGGGCTCTCCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGVNQQA*GALPAR
Trigger: CCGGGCAGGGAGAGCCCCTCAGGCCTGTTGGTTTAC...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCAGGAGCAGCAGCTGTTaGCCCCCGGTGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTRSSSC*PPVTAQ
Trigger: CTGGGCTGTCACCGGGGGTCAACAGCTGCTGCTCCT...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCGCTGTTGACCCCCGGTaGCAGCCCAGGGGTTGTACA +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTAVDPR*QPRGCT
Trigger: TGTACAACCCCTGGGCTGTCACCGGGGGTCAACAGC...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCCTCTGGGTTGGCAGCTaGAGCCTGCCGATTCCGCTC +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTLWVGS*SLPIPL
Trigger: GAGCGGAATCGGCAGGCTGCAGCTGCCAACCCAGAG...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCGTGGGTGGGCAGGGATaGAGGGAGTCGGTAGAACGG +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTVGGQG*RESVER
Trigger: CCGTTCTACCGACTCCCTCCATCCCTGCCCACCCAC...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGGAGACCCATCCGGGCTaGTGGCTGGAGCGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQETHPG*WLERGA
Trigger: GGCTCCGCGCTCCAGCCATCAGCCCGGATGGGTCTC...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR GCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGACACAACCCCGGTTTTTaGCCCTCTGGCCTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGHNPGF*PSGLSD
Trigger: GTCGGAGAGGCCAGAGGGGCAAAAACCGGGGTTGTG...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGCGCCGCTGCTTTGGGTaGGGGGCTGACAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQRRCFG*GADRAA
Trigger: CGCAGCCCTGTCAGCCCCCCACCCAAAGCAGCGGCG...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR GCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCCTGTTCCCGCCCCTATaGTTCCTCCTGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTLFPPL*FLLLQP
Trigger: AGGTTGGAGCAGGAGGAAGCATAGGGGCGGGAACAG...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCCCAAGGTTCTCTGAATaGGACAGATGCCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTPRFSE*DRCPWG
Trigger: GCCCCAGGGGCATCTGTCCCATTCAGAGAACCTTGG...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGAGATCCCAAGACAGTGTaGGAGGGAAGGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGDPKTV*EGRPFL
Trigger: GAGGAAAGGCCTTCCCTCTCACACTGTCTTGGGATC...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTCTCCTCTGGGCGCACTaGCTGGGAGCACGAGACTGG +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGLLWAH*LGARDW
Trigger: CCAGTCTCGTGCTCCCAGGCAGTGCGCCCAGAGGAG...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR GCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGACAGTGGCCATCGCACTaGCAAGGTTCTCTGAATGGG +
Preference number: 4 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGQWPSH*QGSLNG
Trigger: CCCATTCAGAGAACCTTGGCAGTGCGATGGCCACTG...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCAAGGCGGACGCGGTGTaGAGCAGCACCAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSKADAV*SSTRQT
Trigger: TGTCTGCCTGGTGCTGCTCCACACCGCGTCCGCCTT...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGATGGAATTCTCTGGGTTaGCAGCTGCAGCCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGWNSLG*QLQPAD
Trigger: ATCGGCAGGCTGCAGCTGCCAACCCAGAGAATTCCA...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGACCTCCTCCGCCTCCTTaGTCCTCATCTTCCATTCTG +
Preference number: 4 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGPPPPP*SSSSIL
Trigger: CAGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGG...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCCCTCCTCCGCCTCCTTaGTCCTCATCTTCCATTCTG +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTPPPPP*SSSSIL
Trigger: CAGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGG...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCGAGGCTCCATGTGTGTaGCTGTGGCTGGTCCCAATA +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTEAPCV*LWLVPI
Trigger: TATTGGGACCAGCCACAGCCACACACATGGAGCCTC...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCACAATCTAGGGCATaGAGGAGGTGGCTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTSQSRA*RRWLFP
Trigger: CGGGAACAGCCACCTCCTCCATGCCCTAGATTGTGA...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGACCACCCCACACACCGTaGTGGAAATCAATCACCAAC +
Preference number: 4 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGPPHTP*WKSITN
Trigger: GTTGGTGATTGATTTCCATCACGGTGTGTGGGGTGG...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGACTTGTGGTGTGTAGGTaGTGCCGGGAACGAGCTATT +
Preference number: 4 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGLVVCR*CRERAI
Trigger: AATAGCTCGTTCCCGGCATCACCTACACACCACAAG...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCCAAAGGCGATGGGTCTaGAACATGCCTGCCCTACTT +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTQRRWV*NMPALL
Trigger: AAGTAGGGCAGGCATGTTGCAGACCCATCGCCTTTG...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCGTGGTCTCTGCACGCTaGTCCAGGAAAGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSVVSAR*SRKGGL
Trigger: CAAGCCCCCTTTCCTGGAGCAGCGTGCAGAGACCAC...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCCCATGTGTGTGGCTGTaGCTGGTCCCAATATGGCTT +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTPCVWL*LVPIWL
Trigger: AAGCCATATTGGGACCAGCCACAGCCACACACATGG...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGCACAACCCCGGTTTTTaGCCCTCTGGCCTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQHNPGF*PSGLSD
Trigger: GTCGGAGAGGCCAGAGGGGCAAAAACCGGGGTTGTG...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTCCCTTCTCAGCCATCTaGTCCCCAGGGAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGPFSAI*SPGSCQ
Trigger: CTGACAGCTCCCTGGGGAGCAGATGGCTGAGAAGGG...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCAGGGTCTCCCTATGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTRVSLC*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGGCAACATAGGGAGACCCT...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCACTTAGGCTGGAGTaGAGTGGCATGATCACAGCT +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTSLRLE*SGMITA
Trigger: AGCTGTGATCATGCCACTGCACTCCAGCCTAAGTGA...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAGCTCTGCGCCTCCTCTaGGCGCACTGCCTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRALRLL*AHCLGA
Trigger: TGCTCCCAGGCAGTGCGCCCAGAGGAGGCGCAGAGC...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR CCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTGGTAGACCCTACCTCTaGAAGGCCCCTGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGGRPYL*KAPVSP
Trigger: GGGAGACACAGGGGCCTTCCAGAGGTAGGGTCTACC...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCCTGGTCTCAAACTCCTaGGTTCAAGAGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTLVSNS*VQEILP
Trigger: TGGGAGGATCTCTTGAACCCAGGAGTTTGAGACCAG...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGAGTGGACTGTATCAGCTaGAATGGTGGCAATAGCCAA +
Preference number: 4 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGVDCIS*NGGNSQ
Trigger: TTGGCTATTGCCACCATTTCAGCTGATACAGTCCAC...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTAGGAGCAGCAGCTGTTaGCCCCCGGTGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGRSSSC*PPVTAQ
Trigger: CTGGGCTGTCACCGGGGGTCAACAGCTGCTGCTCCT...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAAGGAGCAGCAGCTGTTaGCCCCCGGTGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRRSSSC*PPVTAQ
Trigger: CTGGGCTGTCACCGGGGGTCAACAGCTGCTGCTCCT...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGCTGGTTTGGTTCAAGTaGATCCACCGCAACCGCGCC +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQLVWFK*IHRNRA
Trigger: GGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAG...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCAGTGGCCATCGCACTaGCAAGGTTCTCTGAATGGG +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSQWPSH*QGSLNG
Trigger: CCCATTCAGAGAACCTTGGCAGTGCGATGGCCACTG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCTCCTCTGGAATTCTCTaGGTTGGCAGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSSSGIL*VGSCSL
Trigger: CAGGCTGCAGCTGCCAACCCAGAGAATTCCAGAGGA...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCATACACAGCAGTCTCTaGAGCCGGAGTCAGATACAT +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTIHSSL*SRSQIH
Trigger: ATGTATCTGACTCCGGCTCCAGAGACTGCTGTGTAT...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCATCGGCTGCCATCCTaGAGAATCCAGAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSHRLPS*RIQRAV
Trigger: AACAGCCCTCTGGATTCTCCAGGATGGCAGCCGATG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCATTAAAACCTGCTTGTaGTGTGTAGGTGATGCCGGG +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTIKTCL*CVGDAG
Trigger: CCCGGCATCACCTACACACCACAAGCAGGTTTTAAT...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTCAGGAACATCAGCCCTaGGCTTCTAGTGACATCGGC +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGQEHQP*ASSDIG
Trigger: GCCGATGTCACTAGAAGCTCAGGGCTGATGTTCCTG...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGACTGCCAAGGTTCTCTaGATGGGACAGATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQTAKVL*MGQMPL
Trigger: CAGGGGCATCTGTCCCATTCAGAGAACCTTGGCAGT...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTACTGCCAAGGTTCTCTaGATGGGACAGATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGTAKVL*MGQMPL
Trigger: CAGGGGCATCTGTCCCATTCAGAGAACCTTGGCAGT...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGACTCTGGGTTGGCAGCTaGAGCCTGCCGATTCCGCTC +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRLWVGS*SLPIPL
Trigger: GAGCGGAATCGGCAGGCTGCAGCTGCCAACCCAGAG...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCAAAGGCGATGGGTCTaGAACATGCCTGCCCTACTT +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSQRRWV*NMPALL
Trigger: AAGTAGGGCAGGCATGTTGCAGACCCATCGCCTTTG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCGGGGCTTGCCTGAGATaGTCCACAAATAAAAATTGG +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTGACLR*STNKNW
Trigger: CCAATTTTTATTTGTGGAGCATCTCAGGCAAGCCCC...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTCAGTGGCCATCGCACTaGCAAGGTTCTCTGAATGGG +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGQWPSH*QGSLNG
Trigger: CCCATTCAGAGAACCTTGGCAGTGCGATGGCCACTG...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTCCTCTGGAATTCTCTaGGTTGGCAGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQSSGIL*VGSCSL
Trigger: CAGGCTGCAGCTGCCAACCCAGAGAATTCCAGAGGA...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTTCCTCTGGAATTCTCTaGGTTGGCAGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGSSGIL*VGSCSL
Trigger: CAGGCTGCAGCTGCCAACCCAGAGAATTCCAGAGGA...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCCCTCATCTTCCATTCTaGGCAAACATTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTPHLPF*ANISWE
Trigger: TTCCCAGGAAATGTTTGCCCAGAATGGAAGATGAGG...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCCAGTTGTCTGTAGCTaGATCTCCCTCTACCAGGCT +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSPVVCS*ISLYQA
Trigger: AGCCTGGTAGAGGGAGATCCAGCTACAGACAACTGG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCCATGTGTGTGGCTGTaGCTGGTCCCAATATGGCTT +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSPCVWL*LVPIWL
Trigger: AAGCCATATTGGGACCAGCCACAGCCACACACATGG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGGAGGCTCCATGTGTGTaGCTGTGGCTGGTCCCAATA +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQEAPCV*LWLVPI
Trigger: TATTGGGACCAGCCACAGCCACACACATGGAGCCTC...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAAGGGCATGGAGGAGGTaGCTGTTCCCGCCCCTATGC +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRRAWRR*LFPPLC
Trigger: GCATAGGGGCGGGAACAGCCACCTCCTCCATGCCCT...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGATTGTGCTCCACGAATaGCTGGATGGCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQIVLHE*LDGWGL
Trigger: CAAACCCCAGCCATCCAGTCATTCGTGGAGCACAAT...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGACTCTGGGTTGGCAGCTaGAGCCTGCCGATTCCGCTC +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGLWVGS*SLPIPL
Trigger: GAGCGGAATCGGCAGGCTGCAGCTGCCAACCCAGAG...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCGATGGGTCTGCAACATaGCTGCCCTACTTTGTCACT +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSDGSAT*LPYFVT
Trigger: AGTGACAAAGTAGGGCAGGCATGTTGCAGACCCATC...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGCCAGGAAAGGGGGCTTaGCTGAGATGCTCCACAAAT +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQPGKGA*LRCSTN
Trigger: ATTTGTGGAGCATCTCAGGCAAGCCCCCTTTCCTGG...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTCCCTTCTCAGCCATCTaGTCCCCAGGGAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGPFSAI*SPGSCQ
Trigger: CTGACAGCTCCCTGGGGAGCAGATGGCTGAGAAGGG...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGCATCATCAAAGGCGATaGGTCTGCAACATGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQHHQRR*VCNMPA
Trigger: GGCAGGCATGTTGCAGACCCATCGCCTTTGATGATG...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGCCAGTTGTCTGTAGCTaGATCTCCCTCTACCAGGCT +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQPVVCS*ISLYQA
Trigger: AGCCTGGTAGAGGGAGATCCAGCTACAGACAACTGG...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCGGAGATACACTGGTTTaGTTCAAGTGCATCCACCGC +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSGDTLV*FKCIHR
Trigger: GCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAGTGGGTGGGCAGGGATaGAGGGAGTCGGTAGAACGG +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGVGGQG*RESVER
Trigger: CCGTTCTACCGACTCCCTCCATCCCTGCCCACCCAC...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTGGTAGACCCTACCTCTaGAAGGCCCCTGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGGRPYL*KAPVSP
Trigger: GGGAGACACAGGGGCCTTCCAGAGGTAGGGTCTACC...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTTGGCTGGTCCCAATATaGCTTCCTCAGCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGWLVPI*LPQHPS
Trigger: AGAAGGGTGCTGAGGAAGCCATATTGGGACCAGCCA...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAAGGGCATGGAGGAGGTaGCTGTTCCCGCCCCTATGC +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRARAWRR*LFPPLC
Trigger: GCATAGGGGCGGGAACAGCCACCTCCTCCATGCCCT...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCCACGAATGACTGGATaGCTGGGGTTTGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSPRMTG*LGFVTV
Trigger: AACAGTGACAAACCCCAGCCATCCAGTCATTCGTGG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGCTCCACGAATGACTaGATGGCTGGGGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQCSTND*MAGVCH
Trigger: GTGACAAACCCCAGCCATCCAGTCATTCGTGGAGCA...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCGTGGACTGTATCAGCTaGAATGGTGGCAATAGCCAA +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSVDCIS*NGGNSQ
Trigger: TTGGCTATTGCCACCATTTCAGCTGATACAGTCCAC...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGACCGGAGCTGAGGTCTTaGCTGGAGATCCGAACGAGA +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRPELRS*LEIRTR
Trigger: TCTCGTTCGGATCTCCAGGCAAGACCTCAGCTCCGG...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR GCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGCGGCTCAGCGGCAGCTaGCGCGCTCTGCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWRLSGS*RALRLL
Trigger: GAGGAGGCGCAGAGCGCGGCAGCTGCCGCTGAGCCG...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR GCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAGCATATTTGAGTCACTaGTCAGCGCGAAGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRAYLSH*SARRAR
Trigger: GCGCGCCCTTCGCGCTGAGCAGTGACTCAAATATGC...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR GCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCACACAACCCCGGTTTTTaGCCCTCTGGCCTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAHNPGF*PSGLSD
Trigger: GTCGGAGAGGCCAGAGGGGCAAAAACCGGGGTTGTG...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGGATGGGTCTGCAACATaGCTGCCCTACTTTGTCACT +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQDGSAT*LPYFVT
Trigger: AGTGACAAAGTAGGGCAGGCATGTTGCAGACCCATC...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGACTGTGTCTCCCGGGCTaGACTGGGCAGCCAGCATAT +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGLCLPG*TGQPAY
Trigger: ATATGCTGGCTGCCCAGTGCAGCCCGGGAGACACAG...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTTCCGACCTTTTCCTCTaGAATTCTCTGGGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGSDLFL*NSLGWQ
Trigger: CTGCCAACCCAGAGAATTCCAGAGGAAAAGGTCGGA...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGGAGCTGTCAGGTGTTTaGGTATATAGGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQELSGV*VYRSSS
Trigger: GCTGCTGCTCCTATATACCCAAACACCTGACAGCTC...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTCTGGTCTCAAACTCCTaGGTTCAAGAGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGLVSNS*VQEILP
Trigger: TGGGAGGATCTCTTGAACCCAGGAGTTTGAGACCAG...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTGAAGCCTGGGAACAGTaGCCATCGCACTGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGEAWEQ*PSHCQG
Trigger: ACCTTGGCAGTGCGATGGCCACTGTTCCCAGGCTTC...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CAA 72 bp TCCTCCTCCTCTTCTTCTTCCTCCTCCTCCGCCTCCTaGGTCCTCATCTTCCATTCTGGGCAAACATTTCCT +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSSAS*VLIFHSGQTFP
Trigger: AGGAAATGTTTGCCCAGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGGAGGAAGAAGAAGAGGAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTGCGCGGGGAGTCCCGTaGAGACATGAGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFARGVP*RHEGAR
Trigger: CCTGGCGCCCTCATGTCTTCACGGGACTCCCCGCGC...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR TCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTCAGGAACATCAGCCCTaGGCTTCTAGTGACATCGGC +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGQEHQP*ASSDIG
Trigger: GCCGATGTCACTAGAAGCTCAGGGCTGATGTTCCTG...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAGATCCCAAGACAGTGTaGGAGGGAAGGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRDPKTV*EGRPFL
Trigger: GAGGAAAGGCCTTCCCTCTCACACTGTCTTGGGATC...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCACTGGTTTGGTTCAAGTaGATCCACCGCAACCGCGCC +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRALVWFK*IHRNRA
Trigger: GGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAG...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTGCCACATCCAAATTGTaGTCCACGAATGACTGGATG +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGATSKL*STNDWM
Trigger: CATCCAGTCATTCGTGGAGCACAATTTGGATGTGGC...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTATACACAGCAGTCTCTaGAGCCGGAGTCAGATACAT +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGIHSSL*SRSQIH
Trigger: ATGTATCTGACTCCGGCTCCAGAGACTGCTGTGTAT...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGACATCGGCTGCCATCCTaGAGAATCCAGAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRHRLPS*RIQRAV
Trigger: AACAGCCCTCTGGATTCTCCAGGATGGCAGCCGATG...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCACCAAGGTTCTCTGAATaGGACAGATGCCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAPRFSE*DRCPWG
Trigger: GCCCCAGGGGCATCTGTCCCATTCAGAGAACCTTGG...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAGAAGCCTGGGAACAGTaGCCATCGCACTGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAEAWEQ*PSHCQG
Trigger: ACCTTGGCAGTGCGATGGCCACTGTTCCCAGGCTTC...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTATTAAAACCTGCTTGTaGTGTGTAGGTGATGCCGGG +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGIKTCL*CVGDAG
Trigger: CCCGGCATCACCTACACACCACAAGCAGGTTTTAAT...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTCCACCCCACACACCGTaGTGGAAATCAATCACCAAC +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGPPHTP*WKSITN
Trigger: GTTGGTGATTGATTTCCATCACGGTGTGTGGGGTGG...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCATTCTCTGGTCACTGGTaGCCACGCATCAACGGAGCT +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAFSGHW*PRINGA
Trigger: AGCTCCGTTGATGCGTGGTCACCAGTGACCAGAGAA...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCTGTCTCGGCTACATTTaGAATGACCGTCATCAATCT +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSCLGYI*NDRHQS
Trigger: AGATTGATGACGGTCATTTCAAATGTAGCCGAGACA...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620847.1
CDS-3UTR GCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAGTACGTTGTCTCAGCTaGATCGCAAGAGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAVRCLS*IARAAA
Trigger: TGCAGCGGCTCTTGCGATGCAGCTGAGACAACGTAC...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTGGTCTGCAACATGCCTaGCCTACTTTGTCACTCACC +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGGLQHA*PTLSLT
Trigger: GGTGAGTGACAAAGTAGGGCAGGCATGTTGCAGACC...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTTTGTCACCTTTCTTTaGATTTTGCGAGCACATATA +
Preference number: 4 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTFVTFL*ILRAHI
Trigger: TATATGTGCTCGCAAAATGCAAAGAAAGGTGACAAA...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCGCTTCCATTAAAACCTaGTTGTGGTGTGTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSASIKT*LWCVGD
Trigger: ATCACCTACACACCACAAGCAGGTTTTAATGGAAGC...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAAAGGCGGACGCGGTGTaGAGCAGCACCAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSKADAV*SSTRQT
Trigger: TGTCTGCCTGGTGCTGCTCCACACCGCGTCCGCCTT...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTCCTCATCTTCCATTCTaGGCAAACATTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGPHLPF*ANISWE
Trigger: TTCCCAGGAAATGTTTGCCCAGAATGGAAGATGAGG...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAAAAGTCAAGTGCCAGTaGTCTCTGCACGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRKVKCQ*SLHAAP
Trigger: TGGAGCAGCGTGCAGAGACCACTGGCACTTGACTTT...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGATGGCTGGTCCCAATATaGCTTCCTCAGCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRWLVPI*LPQHPS
Trigger: AGAAGGGTGCTGAGGAAGCCATATTGGGACCAGCCA...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTCCATGTGTGTGGCTGTaGCTGGTCCCAATATGGCTT +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGPCVWL*LVPIWL
Trigger: AAGCCATATTGGGACCAGCCACAGCCACACACATGG...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAGAGGCTCCATGTGTGTaGCTGTGGCTGGTCCCAATA +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAEAPCV*LWLVPI
Trigger: TATTGGGACCAGCCACAGCCACACACATGGAGCCTC...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGATCACAATCTAGGGCATaGAGGAGGTGGCTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGSQSRA*RRWLFP
Trigger: CGGGAACAGCCACCTCCTCCATGCCCTAGATTGTGA...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAACTGAGGTTGAAGCCTaGGAACAGTGGCCATCGCAC +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGTEVEA*EQWPSH
Trigger: GTGCGATGGCCACTGTTCCCAGGCTTCAACCTCAGT...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCATCAGGATAATCCTCTaGCATATTTGCTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSIRIIL*HICSWL
Trigger: CAGCCAAGAGCAAATATGCCAGAGGATTATCCTGAT...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620847.1
CDS-3UTR TCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTAGTCCCGTGAAGACATaGGGGCGCCAGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFSPVKT*GRQERR
Trigger: CCTGCGCTCCTGGCGCCCTCATGTCTTCACGGGACT...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR TCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTGTAAACCAACAGGCCTaGGGGGCTCTCCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFVNQQA*GALPAR
Trigger: CCGGGCAGGGAGAGCCCCTCAGGCCTGTTGGTTTAC...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAAGAACGGCAGCTACCTaGCAGCATTGTCGACATTAC +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRRTAAT*QHCRHY
Trigger: GTAATGTCGACAATGCTGTCAGGTAGCTGCCGTTCT...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGGCTGTTGACCCCCGGTaGCAGCCCAGGGGTTGTACA +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGAVDPR*QPRGCT
Trigger: TGTACAACCCCTGGGCTGTCACCGGGGGTCAACAGC...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAATTGTGCTCCACGAATaGCTGGATGGCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAIVLHE*LDGWGL
Trigger: CAAACCCCAGCCATCCAGTCATTCGTGGAGCACAAT...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGACTTGTGGTGTGTAGGTaGTGCCGGGAACGAGCTATT +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGLVVCR*CRERAI
Trigger: AATAGCTCGTTCCCGGCATCACCTACACACCACAAG...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTCGGCTACATTTGAAATaGCCGTCATCAATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGRLHLK*PSSIFS
Trigger: AGAGAAGATTGATGACGGTCATTTCAAATGTAGCCG...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620847.1
CDS-3UTR TCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTATATTTGCTCTTGGCTaGATGTCTCGGCTACATTTG +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGIFALG*MSRLHL
Trigger: CAAATGTAGCCGAGACATTCAGCCAAGAGCAAATAT...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620847.1
CDS-3UTR GCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTCAACAGGGCGAGGGCTaGCGGCAACTCTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGQQGEG*RQLSRR
Trigger: CCGGCGGGAGAGTTGCCGGCAGCCCTCGCCCTGTTG...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR GCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAGGTCTGCAACATGCCTaGCCTACTTTGTCACTCACC +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGGLQHA*PTLSLT
Trigger: GGTGAGTGACAAAGTAGGGCAGGCATGTTGCAGACC...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCACAAAGGCGATGGGTCTaGAACATGCCTGCCCTACTT +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAQRRWV*NMPALL
Trigger: AAGTAGGGCAGGCATGTTGCAGACCCATCGCCTTTG...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGGAACTTCCAAACAAGTaGACTCCTTACGGTATCAGA +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQELPNK*TPYGIR
Trigger: TCTGATACCGTAAGGAGTGCACTTGTTTGGAAGTTC...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGCGGCGGCACCCAGCCTaGCGCCCACACCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWRRHPA*RPHLIL
Trigger: AAGAATGAGGTGTGGGCGGCAGGCTGGGTGCCGCCG...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344622.8
CDS-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGCAGCAAGGGCGCGCTaGAGGCGGCGGCCAAGACTC +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGAARAR*RRRPRL
Trigger: GAGTCTTGGCCGCCGCCTCCAGCGCGCCCTTGCTGC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR CCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTTCCGACCTTTTCCTCTaGAATTCTCTGGGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGSDLFL*NSLGWQ
Trigger: CTGCCAACCCAGAGAATTCCAGAGGAAAAGGTCGGA...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCACATCATCAAAGGCGATaGGTCTGCAACATGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAHHQRR*VCNMPA
Trigger: GGCAGGCATGTTGCAGACCCATCGCCTTTGATGATG...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCATGGCTGGTCCCAATATaGCTTCCTCAGCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAWLVPI*LPQHPS
Trigger: AGAAGGGTGCTGAGGAAGCCATATTGGGACCAGCCA...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGAGGGCATGGAGGAGGTaGCTGTTCCCGCCCCTATGC +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGRAWRR*LFPPLC
Trigger: GCATAGGGGCGGGAACAGCCACCTCCTCCATGCCCT...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCAACTTTACCCTTTTGTaGATTTGGTGGAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSNFTLL*IWWSNL
Trigger: CAAGTTGCTCCACCAAATCCACAAAAGGGTAAAGTT...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CAA 72 bp ACCCCACACACCGTGATGGAAATCAATCACCAACCGTaGGCAAAAATGCTGGTTGTAGTAAACCTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: TPHTVMEINHQP*AKMLVVVNLGP
Trigger: AGGCCCGAGGTTTACTACAACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTTGCTGCTGCCGGAGCTaGGGTCTTGCCTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFCCCRS*GLAWRS
Trigger: GGATCTCCAGGCAAGACCTCAGCTCCGGCAGCAGCA...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR TCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAGAAAGGGGGCTTGCCTaGGATGCTCCACAAATAAAA +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRERGLA*DAPQIK
Trigger: TTTTATTTGTGGAGCATCTCAGGCAAGCCCCCTTTC...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCACTGGTTTGGTTCAAGTaGATCCACCGCAACCGCGCC +
Preference number: 4 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSLVWFK*IHRNRA
Trigger: GGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAG...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAAGTGCCAGTGGTCTCTaGACGCTGCTCCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSSASGL*TLLQER
Trigger: CCTTTCCTGGAGCAGCGTGCAGAGACCACTGGCACT...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGCTGTGTCTCCCGGGCTaGACTGGGCAGCCAGCATAT +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGLCLPG*TGQPAY
Trigger: ATATGCTGGCTGCCCAGTGCAGCCCGGGAGACACAG...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCATCACTTAGGCTGGAGTaGAGTGGCATGATCACAGCT +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRASLRLE*SGMITA
Trigger: AGCTGTGATCATGCCACTGCACTCCAGCCTAAGTGA...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCACTGTTCCCGCCCCTATaGTTCCTCCTGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSLFPPL*FLLLQP
Trigger: AGGTTGGAGCAGGAGGAAGCATAGGGGCGGGAACAG...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGTCTGGGCGCACTGCCTaGGAGCACGAGACTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGSGRTA*EHETGL
Trigger: CAAACCAGTCTCGTGCTCCCAGGCAGTGCGCCCAGA...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGAAGAGTTCGCAATCCTaGGGTCGCGCGGGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGKSSQS*GRAGQQ
Trigger: TTGCTGCCCCGCGCGACCCCAGGATTGCGAACTCTT...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR CCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAATACACAGCAGTCTCTaGAGCCGGAGTCAGATACAT +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRIHSSL*SRSQIH
Trigger: ATGTATCTGACTCCGGCTCCAGAGACTGCTGTGTAT...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAGGAGATACACTGGTTTaGTTCAAGTGCATCCACCGC +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAGDTLV*FKCIHR
Trigger: GCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGGGTAGACCCTACCTCTaGAAGGCCCCTGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGGRPYL*KAPVSP
Trigger: GGGAGACACAGGGGCCTTCCAGAGGTAGGGTCTACC...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAGAGCTGTCAGGTGTTTaGGTATATAGGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGELSGV*VYRSSS
Trigger: GCTGCTGCTCCTATATACCCAAACACCTGACAGCTC...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAGAAGCCTGGGAACAGTaGCCATCGCACTGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSEAWEQ*PSHCQG
Trigger: ACCTTGGCAGTGCGATGGCCACTGTTCCCAGGCTTC...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGAACTTTACCCTTTTGTaGATTTGGTGGAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQNFTLL*IWWSNL
Trigger: CAAGTTGCTCCACCAAATCCACAAAAGGGTAAAGTT...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CAA 72 bp CCTTCAGGTTTGTGTTTAATCATGAGCACAGCCTTTTaGGTTCCTAGCCAACTTCTTCCCACCCCACACACC +
Preference number: 4 (lower is better)
Translates to: PSGLCLIMSTAF*VPSQLLPTPHT
Trigger: GGTGTGTGGGGTGGGAAGAAGTTGGCTAGGAACCAAAAAGGCTGTGCTCATGATTAAACACAAACCTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CAA 72 bp GATTTGGTGGAGCAACTTGCTTCCATTAAAACCTGCTaGTGGTGTGTAGGTGATGCCGGGAACGAGCTATTG +
Preference number: 4 (lower is better)
Translates to: DLVEQLASIKTC*WCVGDAGNELL
Trigger: CAATAGCTCGTTCCCGGCATCACCTACACACCACAAGCAGGTTTTAATGGAAGCAAGTTGCTCCACCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAGTGGACTGTATCAGCTaGAATGGTGGCAATAGCCAA +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGVDCIS*NGGNSQ
Trigger: TTGGCTATTGCCACCATTTCAGCTGATACAGTCCAC...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCACGCGCCGGTAATCAGTaGTGGTGGACTGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSRAGNQ*WWTVSA
Trigger: AGCTGATACAGTCCACCATCACTGATTACCGGCGCG...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTCTATATTTCTGTATCTaGAACAGATGCATTGCATCG +
Preference number: 4 (lower is better)
Translates to: HWFGSSASTATAPVISDGLYFCI*NRCIAS
Trigger: CGATGCAATGCATCTGTTTCAGATACAGAAATATAG...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAGAAAGGGGGCTTGCCTaGGATGCTCCACAAATAAAA +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGERGLA*DAPQIK
Trigger: TTTTATTTGTGGAGCATCTCAGGCAAGCCCCCTTTC...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGCCTCCTTCAGCCTCTTaGGTAGCTGGGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGPPSAS*VAGTTG
Trigger: ACCTGTGGTCCCAGCTACTCAAGAGGCTGAAGGAGG...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGATCTCTCCTACAAGAATaGTGGCGAAAACCACAACTC +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRSLLQE*WRKPQL
Trigger: GAGTTGTGGTTTTCGCCAGCATTCTTGTAGGAGAGA...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGCTGTTCCCGCCCCTATaGTTCCTCCTGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGLFPPL*FLLLQP
Trigger: AGGTTGGAGCAGGAGGAAGCATAGGGGCGGGAACAG...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGATCCTCTGGCATATTTaGGGCGGGCAGCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWILWHI*GGQREG
Trigger: GCCTTCCCGCTGCCCGCCGCAAATATGCCAGAGGAT...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344622.8
CDS-3UTR CCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCATGGAATTCTCTGGGTTaGCAGCTGCAGCCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSWNSLG*QLQPAD
Trigger: ATCGGCAGGCTGCAGCTGCCAACCCAGAGAATTCCA...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTTCACAGGAGATACACTaGTTTGGTTCAAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGSQEIH*FGSSAS
Trigger: GGATGCACTTGAACCAAACCAGTGTATCTCCTGTGA...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGTCTCCCGGGCTGCACTaGGCAGCCAGCATATTCTCG +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWSPGLH*AASIFS
Trigger: CGAGAATATGCTGGCTGCCCAGTGCAGCCCGGGAGA...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGCCAAGGTTCTCTGAATaGGACAGATGCCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGPRFSE*DRCPWG
Trigger: GCCCCAGGGGCATCTGTCCCATTCAGAGAACCTTGG...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAACTGAGGTTGAAGCCTaGGAACAGTGGCCATCGCAC +
Preference number: 4 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSTEVEA*EQWPSH
Trigger: GTGCGATGGCCACTGTTCCCAGGCTTCAACCTCAGT...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCGTCTGTAGAGAACTTTaGTTTTATAACACAAACGAC +
Preference number: 4 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSVCREL*FYNTND
Trigger: GTCGTTTGTGTTATAAAACCAAAGTTCTCTACAGAC...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGATGGCATATTTGCTCTTaGCTGAATGTCTCGGCTACA +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRWHICS*LNVSAT
Trigger: TGTAGCCGAGACATTCAGCCAAGAGCAAATATGCCA...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620847.1
CDS-3UTR TCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGTTCTCTGGTCACTGGTaGCCACGCATCAACGGAGCT +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGFSGHW*PRINGA
Trigger: AGCTCCGTTGATGCGTGGTCACCAGTGACCAGAGAA...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGCTGTTGACCCCCGGTaGCAGCCCAGGGGTTGTACA +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGAVDPR*QPRGCT
Trigger: TGTACAACCCCTGGGCTGTCACCGGGGGTCAACAGC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGATCTCTCCTACAAGAATaGTGGCGAAAACCACAACTC +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGSLLQE*WRKPQL
Trigger: GAGTTGTGGTTTTCGCCAGCATTCTTGTAGGAGAGA...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAGGGGCTTGCCTGAGATaGTCCACAAATAAAAATTGG +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGGACLR*STNKNW
Trigger: CCAATTTTTATTTGTGGAGCATCTCAGGCAAGCCCC...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAAGAAATAAAGTCAAGTaGCAGTGGTCTCTGCACGCT +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRARNKVK*QWSLHA
Trigger: AGCGTGCAGAGACCACTGGCACTTGACTTTATTTCT...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGTCACAATCTAGGGCATaGAGGAGGTGGCTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGSQSRA*RRWLFP
Trigger: CGGGAACAGCCACCTCCTCCATGCCCTAGATTGTGA...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTGTGTCATACATGTGTTaGCTGCCCGATAAATTCACA +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGVSYMC*LPDKFT
Trigger: TGTGAATTTATCGGGCAGCCAACACATGTATGACAC...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGCGCGCCGGTAATCAGTaGTGGTGGACTGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWRAGNQ*WWTVSA
Trigger: AGCTGATACAGTCCACCATCACTGATTACCGGCGCG...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAGTGTCTTCGGACACATaGAAACAAATCACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGVSSDT*KQITGD
Trigger: ATCTCCTGTGATTTGTTTTCATGTGTCCGAAGACAC...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAAGAACGGCAGCTACCTaGCAGCATTGTCGACATTAC +
Preference number: 4 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSRTAAT*QHCRHY
Trigger: GTAATGTCGACAATGCTGTCAGGTAGCTGCCGTTCT...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGGATCCCAAGACAGTGTaGGAGGGAAGGCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWDPKTV*EGRPFL
Trigger: GAGGAAAGGCCTTCCCTCTCACACTGTCTTGGGATC...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTACTGCCAAGGTTCTCTaGATGGGACAGATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFTAKVL*MGQMPL
Trigger: CAGGGGCATCTGTCCCATTCAGAGAACCTTGGCAGT...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGACATACATGTGTTGGCTaGCCGATAAATTCACAATCT +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRHTCVG*PINSQS
Trigger: AGATTGTGAATTTATCGGGCAGCCAACACATGTATG...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAGCTTCCATTAAAACCTaGTTGTGGTGTGTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGASIKT*LWCVGD
Trigger: ATCACCTACACACCACAAGCAGGTTTTAATGGAAGC...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTCCGCAGACCCTAGGTTaGACATTAACTCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFPQTLG*TLTPGA
Trigger: GGCACCTGGAGTTAATGTCCAACCTAGGGTCTGCGG...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR CCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGTGGAATTCTCTGGGTTaGCAGCTGCAGCCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWWNSLG*QLQPAD
Trigger: ATCGGCAGGCTGCAGCTGCCAACCCAGAGAATTCCA...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGCATCGGCTGCCATCCTaGAGAATCCAGAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWHRLPS*RIQRAV
Trigger: AACAGCCCTCTGGATTCTCCAGGATGGCAGCCGATG...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTTCTCCCGGGCTGCACTaGGCAGCCAGCATATTCTCG +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGSPGLH*AASIFS
Trigger: CGAGAATATGCTGGCTGCCCAGTGCAGCCCGGGAGA...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAGAGATCCTCCCACCTTaGCTTTCCAAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSEILPP*LSKVLG
Trigger: TCCCAACACTTTGGAAAGCCAAGGTGGGAGGATCTC...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAGTGTCATACATGTGTTaGCTGCCCGATAAATTCACA +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAVSYMC*LPDKFT
Trigger: TGTGAATTTATCGGGCAGCCAACACATGTATGACAC...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGATCCTCTGGCATATTTaGGTCACTGCTCAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGILWHI*VTAQRE
Trigger: TTCGCGCTGAGCAGTGACTCAAATATGCCAGAGGAT...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR TCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTTATGTCTCCACTGAGTaGCAGAAAAATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGYVSTE*QKNKPL
Trigger: AAGAGGTTTATTTTTCTGTCACTCAGTGGAGACATA...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTCCTACTAAAAGGAACTaGACCTTTTCTACATATGGT +
Preference number: 4 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGPTKRN*TFSTYG
Trigger: ACCATATGTAGAAAAGGTTCAGTTCCTTTTAGTAGG...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGATTGTGCTCCACGAATaGCTGGATGGCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWIVLHE*LDGWGL
Trigger: CAAACCCCAGCCATCCAGTCATTCGTGGAGCACAAT...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTCTTGTGGTGTGTAGGTaGTGCCGGGAACGAGCTATT +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFLVVCR*CRERAI
Trigger: AATAGCTCGTTCCCGGCATCACCTACACACCACAAG...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTCCAGGAAAGGGGGCTTaGCTGAGATGCTCCACAAAT +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFPGKGA*LRCSTN
Trigger: ATTTGTGGAGCATCTCAGGCAAGCCCCCTTTCCTGG...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTAGTGCCAGTGGTCTCTaGACGCTGCTCCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGSASGL*TLLQER
Trigger: CCTTTCCTGGAGCAGCGTGCAGAGACCACTGGCACT...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGACATACATGTGTTGGCTaGCCGATAAATTCACAATCT +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGHTCVG*PINSQS
Trigger: AGATTGTGAATTTATCGGGCAGCCAACACATGTATG...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGCATCATCAAAGGCGATaGGTCTGCAACATGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWHHQRR*VCNMPA
Trigger: GGCAGGCATGTTGCAGACCCATCGCCTTTGATGATG...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAAAGTCAAGTGCCAGTaGTCTCTGCACGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWKVKCQ*SLHAAP
Trigger: TGGAGCAGCGTGCAGAGACCACTGGCACTTGACTTT...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGGAGCTGTCAGGTGTTTaGGTATATAGGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGELSGV*VYRSSS
Trigger: GCTGCTGCTCCTATATACCCAAACACCTGACAGCTC...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGGAGATCCTCCCACCTTaGCTTTCCAAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGEILPP*LSKVLG
Trigger: TCCCAACACTTTGGAAAGCCAAGGTGGGAGGATCTC...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGCCACGAATGACTGGATaGCTGGGGTTTGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGPRMTG*LGFVTV
Trigger: AACAGTGACAAACCCCAGCCATCCAGTCATTCGTGG...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTTGCTCCACGAATGACTaGATGGCTGGGGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFCSTND*MAGVCH
Trigger: GTGACAAACCCCAGCCATCCAGTCATTCGTGGAGCA...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGTGCTCCACGAATGACTaGATGGCTGGGGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWCSTND*MAGVCH
Trigger: GTGACAAACCCCAGCCATCCAGTCATTCGTGGAGCA...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTCAGGAACATCAGCCCTaGGCTTCTAGTGACATCGGC +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGQEHQP*ASSDIG
Trigger: GCCGATGTCACTAGAAGCTCAGGGCTGATGTTCCTG...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTCGCGCCGGTAATCAGTaGTGGTGGACTGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGRAGNQ*WWTVSA
Trigger: AGCTGATACAGTCCACCATCACTGATTACCGGCGCG...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCATATGTCTCCACTGAGTaGCAGAAAAATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAYVSTE*QKNKPL
Trigger: AAGAGGTTTATTTTTCTGTCACTCAGTGGAGACATA...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGACCTACTAAAAGGAACTaGACCTTTTCTACATATGGT +
Preference number: 4 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGPTKRN*TFSTYG
Trigger: ACCATATGTAGAAAAGGTTCAGTTCCTTTTAGTAGG...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGAACGGCAGCTACCTaGCAGCATTGTCGACATTAC +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWRTAAT*QHCRHY
Trigger: GTAATGTCGACAATGCTGTCAGGTAGCTGCCGTTCT...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGTACGTTGTCTCAGCTaGATCGCAAGAGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGVRCLS*IARAAA
Trigger: TGCAGCGGCTCTTGCGATGCAGCTGAGACAACGTAC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCATCTCTCCTACAAGAATaGTGGCGAAAACCACAACTC +
Preference number: 4 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSSLLQE*WRKPQL
Trigger: GAGTTGTGGTTTTCGCCAGCATTCTTGTAGGAGAGA...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGTCTCCCTATGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWRVSLC*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGGCAACATAGGGAGACCCT...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGGCCACATCCAAATTGTaGTCCACGAATGACTGGATG +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGATSKL*STNDWM
Trigger: CATCCAGTCATTCGTGGAGCACAATTTGGATGTGGC...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGTCCGACCTTTTCCTCTaGAATTCTCTGGGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWSDLFL*NSLGWQ
Trigger: CTGCCAACCCAGAGAATTCCAGAGGAAAAGGTCGGA...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTGAGATCCTCCCACCTTaGCTTTCCAAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFEILPP*LSKVLG
Trigger: TCCCAACACTTTGGAAAGCCAAGGTGGGAGGATCTC...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGCTGGTCTCAAACTCCTaGGTTCAAGAGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWLVSNS*VQEILP
Trigger: TGGGAGGATCTCTTGAACCCAGGAGTTTGAGACCAG...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGCCACGAATGACTGGATaGCTGGGGTTTGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWPRMTG*LGFVTV
Trigger: AACAGTGACAAACCCCAGCCATCCAGTCATTCGTGG...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTACTGAGGTTGAAGCCTaGGAACAGTGGCCATCGCAC +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGTEVEA*EQWPSH
Trigger: GTGCGATGGCCACTGTTCCCAGGCTTCAACCTCAGT...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAGTCTGTAGAGAACTTTaGTTTTATAACACAAACGAC +
Preference number: 4 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRVCREL*FYNTND
Trigger: GTCGTTTGTGTTATAAAACCAAAGTTCTCTACAGAC...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGGTCTGCAACATGCCTaGCCTACTTTGTCACTCACC +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGGLQHA*PTLSLT
Trigger: GGTGAGTGACAAAGTAGGGCAGGCATGTTGCAGACC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGTCACAGGAGATACACTaGTTTGGTTCAAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGSQEIH*FGSSAS
Trigger: GGATGCACTTGAACCAAACCAGTGTATCTCCTGTGA...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTGGATCTCTGTTTCCCTaGTGTCTTCGGACACATGAA +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFGSLFP*CLRTHE
Trigger: TTCATGTGTCCGAAGACACCAGGGAAACAGAGATCC...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CAA 72 bp TATCTTCTCTATATTTCTGTATCTGAAACAGATGCATaGCATCGAGTAGCTTCTCTGGTCACTGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: YLLYISVSETDA*HRVASLVTGDH
Trigger: GTGGTCACCAGTGACCAGAGAAGCTACTCGATGCAATGCATCTGTTTCAGATACAGAAATATAGAGAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGATGGGTCTGCAACATaGCTGCCCTACTTTGTCACT +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGDGSAT*LPYFVT
Trigger: AGTGACAAAGTAGGGCAGGCATGTTGCAGACCCATC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTGGGGCTTGCCTGAGATaGTCCACAAATAAAAATTGG +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFGACLR*STNKNW
Trigger: CCAATTTTTATTTGTGGAGCATCTCAGGCAAGCCCC...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTAGGGTCTCCCTATGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGRVSLC*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGGCAACATAGGGAGACCCT...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTCCTCATCTTCCATTCTaGGCAAACATTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFPHLPF*ANISWE
Trigger: TTCCCAGGAAATGTTTGCCCAGAATGGAAGATGAGG...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGGAGATACACTGGTTTaGTTCAAGTGCATCCACCGC +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGGDTLV*FKCIHR
Trigger: GCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTAAGTTAGCAGGGACTTaGAGACTTTTGGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFKLAGT*RLLACM
Trigger: CATACAGGCCAAAAGTCTCCAAGTCCCTGCTAACTT...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344622.8
CDS-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTATCAGGATAATCCTCTaGCATATTTGCGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGIRIIL*HICGGQ
Trigger: CTGCCCGCCGCAAATATGCCAGAGGATTATCCTGAT...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344622.8
CDS-3UTR TCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTGTGTCTTCGGACACATaGAAACAAATCACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFVSSDT*KQITGD
Trigger: ATCTCCTGTGATTTGTTTTCATGTGTCCGAAGACAC...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGGATCTCTGTTTCCCTaGTGTCTTCGGACACATGAA +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGGSLFP*CLRTHE
Trigger: TTCATGTGTCCGAAGACACCAGGGAAACAGAGATCC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTGTGTCATACATGTGTTaGCTGCCCGATAAATTCACA +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFVSYMC*LPDKFT
Trigger: TGTGAATTTATCGGGCAGCCAACACATGTATGACAC...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGAACTTTACCCTTTTGTaGATTTGGTGGAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGNFTLL*IWWSNL
Trigger: CAAGTTGCTCCACCAAATCCACAAAAGGGTAAAGTT...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
3UTR CAA 72 bp CCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTaGTGTTTAATCATGAGCACAGCCTTTTTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PVSKDIKEIPSG*CLIMSTAFLVP
Trigger: AGGAACCAAAAAGGCTGTGCTCATGATTAAACACAAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTCATACATGTGTTGGCTaGCCGATAAATTCACAATCT +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFHTCVG*PINSQS
Trigger: AGATTGTGAATTTATCGGGCAGCCAACACATGTATG...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGTATGTCTCCACTGAGTaGCAGAAAAATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWYVSTE*QKNKPL
Trigger: AAGAGGTTTATTTTTCTGTCACTCAGTGGAGACATA...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGCTATATTTCTGTATCTaGAACAGATGCATTGCATCG +
Preference number: 4 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWLYFCI*NRCIAS
Trigger: CGATGCAATGCATCTGTTTCAGATACAGAAATATAG...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTCTATATTTCTGTATCTaGAACAGATGCATTGCATCG +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFLYFCI*NRCIAS
Trigger: CGATGCAATGCATCTGTTTCAGATACAGAAATATAG...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR GCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGAACTTCCAAACAAGTaGACTCCTTACGGTATCAGA +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGELPNK*TPYGIR
Trigger: TCTGATACCGTAAGGAGTGCACTTGTTTGGAAGTTC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CCA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTGTCTGTAGAGAACTTTaGTTTTATAACACAAACGAC +
Preference number: 4 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFVCREL*FYNTND
Trigger: GTCGTTTGTGTTATAAAACCAAAGTTCTCTACAGAC...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR TCA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTCCTACTAAAAGGAACTaGACCTTTTCTACATATGGT +
Preference number: 4 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGPTKRN*TFSTYG
Trigger: ACCATATGTAGAAAAGGTTCAGTTCCTTTTAGTAGG...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS GCA 90 bp GGCGGCCAAGACTCCCGCCGCCGCCGCCGCCAACAGGGCGAGGGCTaGCGGCAACTCTCCCGCCGGGCCCCCGCACCCCCAGAAGCCGAG +
Preference number: 5 (lower is better)
Translates to: GGQDSRRRRRQQGEG*RQLSRRAPAPPEAE
Trigger: CTCGGCTTCTGGGGGTGCGGGGGCCCGGCGGGAGAGTTGCCGGCAGCCCTCGCCCTGTTGGCGGCGGCGGCGGCGGGAGTCTTGGCCGCC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS GCA 90 bp GGCACCTGCGCGGGCAGGCGGGAGGTGGGGGAGAGAACCGCAGAATaGACGTTAAGCCTGGGCTCCCTGCGGGTCCCTGCGCCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GTCAGRREVGERTAE*TLSLGSLRVPAPLS
Trigger: GGAGAGGGGCGCAGGGACCCGCAGGGAGCCCAGGCTTAACGTGCATTCTGCGGTTCTCTCCCCCACCTCCCGCCTGCCCGCGCAGGTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510177.5
CDS CCA 90 bp TCAGCGGCAGCTGCCGCGCTCTGCGCCTCCTCTGGGCGCACTGCCTaGGAGCACGAGACTGGTTTGTCTGATGCTGCTGCCGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SAAAAALCASSGRTA*EHETGLSDAAAGAE
Trigger: CTCAGCTCCGGCAGCAGCATCAGACAAACCAGTCTCGTGCTCCCAGGCAGTGCGCCCAGAGGAGGCGCAGAGCGCGGCAGCTGCCGCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS GCA 90 bp AGCACGAGACTGGTTTGTCTGATGCTGCTGCCGGAGCTGAGGTCTTaGCTGGAGATCCGAACGAGACACCACGTCAACCGGCGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: STRLVCLMLLPELRS*LEIRTRHHVNRRGE
Trigger: CTCCCCGCGCCGGTTGACGTGGTGTCTCGTTCGGATCTCCAGGCAAGACCTCAGCTCCGGCAGCAGCATCAGACAAACCAGTCTCGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS GCA 90 bp TCGGATCGGGTCTCCGCAGACCCTAGGTTGGACATTAACTCCAGGTaGCCCAAGTCCCAGCCAGGAGACCCATCCGGGCTGATGGCTGGA +
Preference number: 5 (lower is better)
Translates to: SDRVSADPRLDINSR*PKSQPGDPSGLMAG
Trigger: TCCAGCCATCAGCCCGGATGGGTCTCCTGGCTGGGACTTGGGGCACCTGGAGTTAATGTCCAACCTAGGGTCTGCGGAGACCCGATCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326524.7
ENST00000515058.5
CDS-3UTR CAA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCGCCGGGAACGAGCTATaGACACCCCTTGGATCCTAC +
Preference number: 5 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTAGNEL*TPLGSY
Trigger: GTAGGATCCAAGGGGTGTCAATAGCTCGTTCCCGGC...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCCGCAGACCCTAGGTaGGACATTAACTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTSADPR*DINSRC
Trigger: GCACCTGGAGTTAATGTCCAACCTAGGGTCTGCGGA...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR CAA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGATCCAGGAAAGGGGGCTaGCCTGAGATGCTCCACAAA +
Preference number: 5 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGSRKGG*PEMLHK
Trigger: TTTGTGGAGCATCTCAGGCAAGCCCCCTTTCCTGGA...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCCATGCCTGCCCTACTTaGTCACTCACCAGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTHACPT*SLTSLL
Trigger: TAGAAGGCTGGTGAGTGACAAAGTAGGGCAGGCATG...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGAGATCCTACAGCTTTTTaGGGCAGGGACTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGDPTAF*GRDSPW
Trigger: CCATGGAGAGTCCCTGCCCAAAAAAGCTGTAGGATC...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCAATCCTCTGGCATATTaGCGGCGGGCAGCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSNPLAY*RRAAGR
Trigger: CCTTCCCGCTGCCCGCCGCAAATATGCCAGAGGATT...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344622.8
CDS GCA 90 bp CTGGCCTCTCCGACCTTTTCCTCTGGAATTCTCTGGGTTGGCAGCTaGAGCCTGCCGATTCCGCTCTCTTCTAGGAAGCACTGCCATTTG +
Preference number: 5 (lower is better)
Translates to: LASPTFSSGILWVGS*SLPIPLSSRKHCHL
Trigger: CAAATGGCAGTGCTTCCTAGAAGAGAGCGGAATCGGCAGGCTGCAGCTGCCAACCCAGAGAATTCCAGAGGAAAAGGTCGGAGAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCTCCTCCTCCGCCTCCTaGGTCCTCATCTTCCATTCT +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSSSSAS*VLIFHS
Trigger: AGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGGA...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCTCTCTCCTGTCCAGTaGTCTGTAGCTGGATCTCCC +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSLSPVQ*SVAGSP
Trigger: GGGAGATCCAGCTACAGACAACTGGACAGGAGAGAG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCAGGGTCTCCCTATGTaGCCCAAGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSQGLPM*PKLVSN
Trigger: GTTTGAGACCAGCTTGGGCAACATAGGGAGACCCTG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTGCCGGAGCTGAGGTCTaGCCTGGAGATCCGAACGAG +
Preference number: 5 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGAGAEV*PGDPNE
Trigger: CTCGTTCGGATCTCCAGGCAAGACCTCAGCTCCGGC...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCATGCCTGCCCTACTTaGTCACTCACCAGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSHACPT*SLTSLL
Trigger: TAGAAGGCTGGTGAGTGACAAAGTAGGGCAGGCATG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGAAACAGATGCATaGCATCGAGTAGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTSETDA*HRVASL
Trigger: CAGAGAAGCTACTCGATGCAATGCATCTGTTTCAGA...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCAGAGATCCTCCCACCTaGGCTTTCCAAAGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSRDPPT*AFQSVG
Trigger: CCCAACACTTTGGAAAGCCAAGGTGGGAGGATCTCT...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTCAGGGTCTCCCTATGTaGCCCAAGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: HWFGSSASTATAPVISDGQGLPM*PKLVSN
Trigger: GTTTGAGACCAGCTTGGGCAACATAGGGAGACCCTG...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGCTGGATGGCTGGGGTTaGTCACTGTTTCGAGCAGTC +
Preference number: 5 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQLDGWG*SLFRAV
Trigger: GACTGCTCGAAACAGTGACAAACCCCAGCCATCCAG...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCGATCCTACAGCTTTTTaGGGCAGGGACTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSDPTAF*GRDSPW
Trigger: CCATGGAGAGTCCCTGCCCAAAAAAGCTGTAGGATC...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGACTGGAATTCTCTGGGTaGGCAGCTGCAGCCTGCCGA +
Preference number: 5 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRLEFSG*AAAACR
Trigger: TCGGCAGGCTGCAGCTGCCAACCCAGAGAATTCCAG...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCCCTTGGTCCCTTTCTTaGCACTGTAGCAGGAATGCA +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSPWSLS*HCSRNA
Trigger: TGCATTCCTGCTACAGTGCAAAGAAAGGGACCAAGG...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCAGGAGATACACTGGTTaGGTTCAAGTGCATCCACCG +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSRRYTG*VQVHPP
Trigger: CGGTGGATGCACTTGAACCAAACCAGTGTATCTCCT...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTAGAGATCCTCCCACCTaGGCTTTCCAAAGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: HWFGSSASTATAPVISDGRDPPT*AFQSVG
Trigger: CCCAACACTTTGGAAAGCCAAGGTGGGAGGATCTCT...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCATTTGGTGGAGCAACTaGCTTCCATTAAAACCTGCT +
Preference number: 5 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTIWWSN*LPLKPA
Trigger: AGCAGGTTTTAATGGAAGCAAGTTGCTCCACCAAAT...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAGAGCACGAGACTGGTTaGTCTGATGCTGCTGCCGGA +
Preference number: 5 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGREHETG*SDAAAG
Trigger: TCCGGCAGCAGCATCAGACAAACCAGTCTCGTGCTC...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR CAA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGCCTTGGTCCCTTTCTTaGCACTGTAGCAGGAATGCA +
Preference number: 5 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQPWSLS*HCSRNA
Trigger: TGCATTCCTGCTACAGTGCAAAGAAAGGGACCAAGG...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCTACCCTTTTGTGGATTaGGTGGAGCAACTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSYPFVD*VEQLAS
Trigger: GGAAGCAAGTTGCTCCACCAAATCCACAAAAGGGTA...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS GCA 90 bp CTCCGACCTTTTCCTCTGGAATTCTCTGGGTTGGCAGCTGCAGCCTaGCGATTCCGCTCTCTTCTAGGAAGCACTGCCATTTGTTTATCT +
Preference number: 5 (lower is better)
Translates to: LRPFPLEFSGLAAAA*RFRSLLGSTAICLS
Trigger: AGATAAACAAATGGCAGTGCTTCCTAGAAGAGAGCGGAATCGGCAGGCTGCAGCTGCCAACCCAGAGAATTCCAGAGGAAAAGGTCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS-3UTR CAA 90 bp ACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTCTGGAGAAATACCTTCAGGTTaGTGTTTAATCATGAGCACA +
Preference number: 5 (lower is better)
Translates to: TPGDSPGVVQDLVDPTSGEIPSG*CLIMST
Trigger: TGTGCTCATGATTAAACACAAACCTGAAGGTATTTC...TCCAGAGGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CTGTTGACCCCCGGTGACAGCCCAGGGGTTGTACAGGACCTGGTAGACCCTACCTTTTGTCACCTTTCTTaGCATTTTGCGAGCACATAT +
Preference number: 5 (lower is better)
Translates to: LLTPGDSPGVVQDLVDPTFCHLS*HFASTY
Trigger: ATATGTGCTCGCAAAATGCAAAGAAAGGTGACAAAA...GGTAGGGTCTACCAGGTCCTGTACAACCCCTGGGCTGTCACCGGGGGTCAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTTCCAGGAAAGGGGGCTaGCCTGAGATGCTCCACAAA +
Preference number: 5 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGSRKGG*PEMLHK
Trigger: TTTGTGGAGCATCTCAGGCAAGCCCCCTTTCCTGGA...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGACTGGATGGCTGGGGTTaGTCACTGTTTCGAGCAGTC +
Preference number: 5 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRLDGWG*SLFRAV
Trigger: GACTGCTCGAAACAGTGACAAACCCCAGCCATCCAG...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTGGGGCCACATCCAAATaGTGCTCCACGAATGACTGG +
Preference number: 5 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGGATSK*CSTNDW
Trigger: CCAGTCATTCGTGGAGCACAATTTGGATGTGGCCCC...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTGAAGTTAGCAGGGACTaGGAGACTTTTGGCCTGTAT +
Preference number: 5 (lower is better)
Translates to: HWFGSSASTATAPVISDGEVSRD*ETFGLY
Trigger: ATACAGGCCAAAAGTCTCCAAGTCCCTGCTAACTTC...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344622.8
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCAATCCTCTGGCATATTaGCTCTTGGCTGAATGTCTC +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSNPLAY*LLAECL
Trigger: GAGACATTCAGCCAAGAGCAAATATGCCAGAGGATT...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620847.1
CDS-3UTR CAA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGATATTTTGTCGTACGTaGTCTCAGCTGCATCGCAAG +
Preference number: 5 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQIFCRT*SQLHRK
Trigger: CTTGCGATGCAGCTGAGACAACGTACGACAAAATAT...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCACAGGGTCTCCCTATGTaGCCCAAGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAQGLPM*PKLVSN
Trigger: GTTTGAGACCAGCTTGGGCAACATAGGGAGACCCTG...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTAAGAATTTGGGTATTTaGGGGGAAGGGGATCAGATG +
Preference number: 5 (lower is better)
Translates to: HWFGSSASTATAPVISDGKNLGI*GEGDQM
Trigger: CATCTGATCCCCTTCCCCCAAAATACCCAAATTCTT...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGACTGGATGGCTGGGGTTaGTCACTGTTTCGAGCAGTC +
Preference number: 5 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGLDGWG*SLFRAV
Trigger: GACTGCTCGAAACAGTGACAAACCCCAGCCATCCAG...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAGGGGCCACATCCAAATaGTGCTCCACGAATGACTGG +
Preference number: 5 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGGATSK*CSTNDW
Trigger: CCAGTCATTCGTGGAGCACAATTTGGATGTGGCCCC...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCACAAACTTTACCCTTTaGTGGATTTGGTGGAGCAAC +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSTNFTL*WIWWSN
Trigger: GTTGCTCCACCAAATCCACAAAAGGGTAAAGTTTGT...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGTGATGGTAGCTACCTGACAGCATaGTCGACATTACTTTTAGGT +
Preference number: 5 (lower is better)
Translates to: HWFGSSASTATAPVISDGSYLTA*STLLLG
Trigger: ACCTAAAAGTAATGTCGACAATGCTGTCAGGTAGCT...ACCATCACTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAAGGAGATACACTGGTTaGGTTCAAGTGCATCCACCG +
Preference number: 5 (lower is better)
Translates to: GLVCHTCVGCPINSQSRARRYTG*VQVHPP
Trigger: CGGTGGATGCACTTGAACCAAACCAGTGTATCTCCT...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AGCCATCTGCTCCCCAGGGAGCTGTCAGGTGTTTGGGTATATAGGAGCAGCAGCGAAATACCTTCAGGTTaGTGTTTAATCATGAGCACA +
Preference number: 5 (lower is better)
Translates to: SHLLPRELSGVWVYRSSSEIPSG*CLIMST
Trigger: TGTGCTCATGATTAAACACAAACCTGAAGGTATTTC...GCTGCTGCTCCTATATACCCAAACACCTGACAGCTCCCTGGGGAGCAGATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGACCTTTCTTTGCATTTaGCGAGCACATATACTTTGG +
Preference number: 5 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQTFLCI*RAHILW
Trigger: CCAAAGTATATGTGCTCGCAAAATGCAAAGAAAGGT...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTTACCCTTTTGTGGATTaGGTGGAGCAACTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGYPFVD*VEQLAS
Trigger: GGAAGCAAGTTGCTCCACCAAATCCACAAAAGGGTA...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS CCA 90 bp AAACCAGGTTATCATCTAAAAACGACAGGTCATCATCAAAGGCGATaGGTCTGCAACATGCCTGCCCTACTTTGTCACTCACCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: KPGYHLKTTGHHQRR*VCNMPALLCHSPAF
Trigger: GAAGGCTGGTGAGTGACAAAGTAGGGCAGGCATGTTGCAGACCCATCGCCTTTGATGATGACCTGTCGTTTTTAGATGATAACCTGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS CCA 90 bp TCCCTTTCTTTGCACTGTAGCAGGAATGCAATACACAGCAGTCTCTaGAGCCGGAGTCAGATACATCCACACCTTTTAGCGGAATGCTTT +
Preference number: 5 (lower is better)
Translates to: SLSLHCSRNAIHSSL*SRSQIHPHLLAECF
Trigger: AAAGCATTCCGCTAAAAGGTGTGGATGTATCTGACTCCGGCTCCAGAGACTGCTGTGTATTGCATTCCTGCTACAGTGCAAAGAAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAATATTTTGTCGTACGTaGTCTCAGCTGCATCGCAAG +
Preference number: 5 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRIFCRT*SQLHRK
Trigger: CTTGCGATGCAGCTGAGACAACGTACGACAAAATAT...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGAGATACACTGGTTTGGTTCAAGTGCATCCACCGCAACCGCGCCGGTAATCAGGAAATACCTTCAGGTTaGTGTTTAATCATGAGCACA +
Preference number: 5 (lower is better)
Translates to: GDTLVWFKCIHRNRAGNQEIPSG*CLIMST
Trigger: TGTGCTCATGATTAAACACAAACCTGAAGGTATTTC...CTGATTACCGGCGCGGTTGCGGTGGATGCACTTGAACCAAACCAGTGTATCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAGGGGCCACATCCAAATaGTGCTCCACGAATGACTGG +
Preference number: 5 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSGATSK*CSTNDW
Trigger: CCAGTCATTCGTGGAGCACAATTTGGATGTGGCCCC...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGATCCATTAAAACCTGCTaGTGGTGTGTAGGTGATGCC +
Preference number: 5 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGSIKTC*WCVGDA
Trigger: GGCATCACCTACACACCACAAGCAGGTTTTAATGGA...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGATACCCTTTTGTGGATTaGGTGGAGCAACTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGYPFVD*VEQLAS
Trigger: GGAAGCAAGTTGCTCCACCAAATCCACAAAAGGGTA...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS GCA 90 bp GGTTATCATCTAAAAACGACAGGTCATCATCAAAGGCGATGGGTCTaGAACATGCCTGCCCTACTTTGTCACTCACCAGCCTTCTATTTC +
Preference number: 5 (lower is better)
Translates to: GYHLKTTGHHQRRWV*NMPALLCHSPAFYF
Trigger: GAAATAGAAGGCTGGTGAGTGACAAAGTAGGGCAGGCATGTTGCAGACCCATCGCCTTTGATGATGACCTGTCGTTTTTAGATGATAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS-3UTR CAA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAAAGAATTTGGGTATTTaGGGGGAAGGGGATCAGATG +
Preference number: 5 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAKNLGI*GEGDQM
Trigger: CATCTGATCCCCTTCCCCCAAAATACCCAAATTCTT...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAGATCCTACAGCTTTTTaGGGCAGGGACTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSDPTAF*GRDSPW
Trigger: CCATGGAGAGTCCCTGCCCAAAAAAGCTGTAGGATC...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGGCCGGGAACGAGCTATaGACACCCCTTGGATCCTAC +
Preference number: 5 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWAGNEL*TPLGSY
Trigger: GTAGGATCCAAGGGGTGTCAATAGCTCGTTCCCGGC...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAATTTGGTGGAGCAACTaGCTTCCATTAAAACCTGCT +
Preference number: 5 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRIWWSN*LPLKPA
Trigger: AGCAGGTTTTAATGGAAGCAAGTTGCTCCACCAAAT...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGAACAAACTTTACCCTTTaGTGGATTTGGTGGAGCAAC +
Preference number: 5 (lower is better)
Translates to: DNRKWSPRHFCSAMEQGRTNFTL*WIWWSN
Trigger: GTTGCTCCACCAAATCCACAAAAGGGTAAAGTTTGT...TCTTCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS GCA 90 bp AAAAACGACAGGTCATCATCAAAGGCGATGGGTCTGCAACATGCCTaGCCTACTTTGTCACTCACCAGCCTTCTATTTCTGGATAAGTTT +
Preference number: 5 (lower is better)
Translates to: KNDRSSSKAMGLQHA*PTLSLTSLLFLDKF
Trigger: AAACTTATCCAGAAATAGAAGGCTGGTGAGTGACAAAGTAGGGCAGGCATGTTGCAGACCCATCGCCTTTGATGATGACCTGTCGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS-3UTR CAA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCACATTTCCTGGGAACCTaGGTCCCTTTCTTTGCACTG +
Preference number: 5 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSHFLGT*VPFFAL
Trigger: CAGTGCAAAGAAAGGGACCAAGGTTCCCAGGAAATG...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAATCAATCACCAACCGTaGGCAAAAATGCTGGTTGTA +
Preference number: 5 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGINHQP*AKMLVV
Trigger: TACAACCAGCATTTTTGCCAACGGTTGGTGATTGAT...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGCCTAGTGTGTCATACATGTGTTGGCTGCCCGATAAATTCACAATCTAGGGCAGAAAAGCATGGACCCTaGTTCCCAATTCAAATTTCC +
Preference number: 5 (lower is better)
Translates to: GLVCHTCVGCPINSQSRAEKHGP*FPIQIS
Trigger: GGAAATTTGAATTGGGAACAAGGGTCCATGCTTTTC...TGCCCTAGATTGTGAATTTATCGGGCAGCCAACACATGTATGACACACTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAAGCTACCTGACAGCATaGTCGACATTACTTTTAGGT +
Preference number: 5 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGSYLTA*STLLLG
Trigger: ACCTAAAAGTAATGTCGACAATGCTGTCAGGTAGCT...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAAGACAACAGGAAGTGGAGCCCACGACATTTCTGTTCAGCAATGGAGCAAGGAACAAACTTTACCCTTTaGTGGATTTGGTGGAGCAAC +
Preference number: 5 (lower is better)
Translates to: KDNRKWSPRHFCSAMEQGTNFTL*WIWWSN
Trigger: GTTGCTCCACCAAATCCACAAAAGGGTAAAGTTTGT...TCCTTGCTCCATTGCTGAACAGAAATGTCGTGGGCTCCACTTCCTGTTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGCATGCCTGCCCTACTTaGTCACTCACCAGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWHACPT*SLTSLL
Trigger: TAGAAGGCTGGTGAGTGACAAAGTAGGGCAGGCATG...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGCATTTCCTGGGAACCTaGGTCCCTTTCTTTGCACTG +
Preference number: 5 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGHFLGT*VPFFAL
Trigger: CAGTGCAAAGAAAGGGACCAAGGTTCCCAGGAAATG...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CACCCCACACACCGTGATGGAAATCAATCACCAACCGTTGGCAAAAATGCTGGTTTTTGTCACCTTTCTTaGCATTTTGCGAGCACATAT +
Preference number: 5 (lower is better)
Translates to: HPTHRDGNQSPTVGKNAGFCHLS*HFASTY
Trigger: ATATGTGCTCGCAAAATGCAAAGAAAGGTGACAAAA...ACCAGCATTTTTGCCAACGGTTGGTGATTGATTTCCATCACGGTGTGTGGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGAGATCCTCCCACCTaGGCTTTCCAAAGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWRDPPT*AFQSVG
Trigger: CCCAACACTTTGGAAAGCCAAGGTGGGAGGATCTCT...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTGCCGGGAACGAGCTATaGACACCCCTTGGATCCTAC +
Preference number: 5 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGAGNEL*TPLGSY
Trigger: GTAGGATCCAAGGGGTGTCAATAGCTCGTTCCCGGC...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCATCCATTAAAACCTGCTaGTGGTGTGTAGGTGATGCC +
Preference number: 5 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSSIKTC*WCVGDA
Trigger: GGCATCACCTACACACCACAAGCAGGTTTTAATGGA...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTTCCTCCTCCGCCTCCTaGGTCCTCATCTTCCATTCT +
Preference number: 5 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGSSSAS*VLIFHS
Trigger: AGAATGGAAGATGAGGACCAAGGAGGCGGAGGAGGA...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGTCCATTAAAACCTGCTaGTGGTGTGTAGGTGATGCC +
Preference number: 5 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGSIKTC*WCVGDA
Trigger: GGCATCACCTACACACCACAAGCAGGTTTTAATGGA...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGCTGGCATATTTGCTCTaGGCTGAATGTCTCGGCTAC +
Preference number: 5 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWLAYLL*AECLGY
Trigger: GTAGCCGAGACATTCAGCCAAGAGCAAATATGCCAG...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620847.1
CDS CCA 90 bp TGCAACATGCCTGCCCTACTTTGTCACTCACCAGCCTTCTATTTCTaGATAAGTTTTTCAATATTTTGTCGTACGTTGTCTCAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: CNMPALLCHSPAFYF*ISFSIFCRTLSQLH
Trigger: ATGCAGCTGAGACAACGTACGACAAAATATTGAAAAACTTATCCAGAAATAGAAGGCTGGTGAGTGACAAAGTAGGGCAGGCATGTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS-3UTR CAA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGTCTGAAACAGATGCATaGCATCGAGTAGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGSETDA*HRVASL
Trigger: CAGAGAAGCTACTCGATGCAATGCATCTGTTTCAGA...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAATTTGGTGGAGCAACTaGCTTCCATTAAAACCTGCT +
Preference number: 5 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSIWWSN*LPLKPA
Trigger: AGCAGGTTTTAATGGAAGCAAGTTGCTCCACCAAAT...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGTGATCGCAATGATAAAGAAAAATCACAAACTTTACCCTTTTGTGGATTTGGTAATCCTCTGGCATATTaGAGTCACTGCTCAGCGCGA +
Preference number: 5 (lower is better)
Translates to: GDRNDKEKSQTLPFCGFGNPLAY*SHCSAR
Trigger: TCGCGCTGAGCAGTGACTCAAATATGCCAGAGGATT...ACCAAATCCACAAAAGGGTAAAGTTTGTGATTTTTCTTTATCATTGCGATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS-3UTR CAA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTATATTTTGTCGTACGTaGTCTCAGCTGCATCGCAAG +
Preference number: 5 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFIFCRT*SQLHRK
Trigger: CTTGCGATGCAGCTGAGACAACGTACGACAAAATAT...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTTCTGAAACAGATGCATaGCATCGAGTAGCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFSETDA*HRVASL
Trigger: CAGAGAAGCTACTCGATGCAATGCATCTGTTTCAGA...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAGACAGATCAGAGAAGTCAGAACTTCCAAACAAGTGCACTCCTTACGGTATCAACCTTTCTTTGCATTTaGCGAGCACATATACTTTGG +
Preference number: 5 (lower is better)
Translates to: KTDQRSQNFQTSALLTVSTFLCI*RAHILW
Trigger: CCAAAGTATATGTGCTCGCAAAATGCAAAGAAAGGT...TGATACCGTAAGGAGTGCACTTGTTTGGAAGTTCTGACTTCTCTGATCTGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp CTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAGGGAGCTACCTGACAGCATaGTCGACATTACTTTTAGGT +
Preference number: 5 (lower is better)
Translates to: LNLFYIWLCIVQIGIRGGSYLTA*STLLLG
Trigger: ACCTAAAAGTAATGTCGACAATGCTGTCAGGTAGCT...CCCTCCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGAAGAATTTGGGTATTTaGGGGGAAGGGGATCAGATG +
Preference number: 5 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWKNLGI*GEGDQM
Trigger: CATCTGATCCCCTTCCCCCAAAATACCCAAATTCTT...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGATCAATCACCAACCGTaGGCAAAAATGCTGGTTGTA +
Preference number: 5 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWINHQP*AKMLVV
Trigger: TACAACCAGCATTTTTGCCAACGGTTGGTGATTGAT...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS-3UTR CAA 90 bp AAACCACAACTCGTTTCCTGTTTCCAAGGACATAAAGGAAATACCTTCAGGTTTGAAAAGCATGGACCCTaGTTCCCAATTCAAATTTCC +
Preference number: 5 (lower is better)
Translates to: KPQLVSCFQGHKGNTFRFEKHGP*FPIQIS
Trigger: GGAAATTTGAATTGGGAACAAGGGTCCATGCTTTTC...AAACCTGAAGGTATTTCCTTTATGTCCTTGGAAACAGGAAACGAGTTGTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS TCA 90 bp AATCCTCTGGCATATTTGCTCTTGGCTGAATGTCTCGGCTACATTTaGAATGACCGTCATCAATCTTCTCTTAAATCATCAAGTCATCTT +
Preference number: 5 (lower is better)
Translates to: NPLAYLLLAECLGYI*NDRHQSSLKSSSHL
Trigger: AAGATGACTTGATGATTTAAGAGAAGATTGATGACGGTCATTTCAAATGTAGCCGAGACATTCAGCCAAGAGCAAATATGCCAGAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620847.1
CDS-3UTR CAA 90 bp GGAACTGAACCTTTTCTACATATGGTTATGCATAGTACAGATAGGTATACGTGGTTTTGTCACCTTTCTTaGCATTTTGCGAGCACATAT +
Preference number: 5 (lower is better)
Translates to: GTEPFLHMVMHSTDRYTWFCHLS*HFASTY
Trigger: ATATGTGCTCGCAAAATGCAAAGAAAGGTGACAAAA...CCACGTATACCTATCTGTACTATGCATAACCATATGTAGAAAAGGTTCAGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS CCA 72 bp AGAAGCCGAGGTCCGAGCAGCCGCCGCTGCTTTGGGTaGGGGGCTGACAGGGCTGCGCGCGTCGCGCTCTTG +
Preference number: 6 (lower is better)
Translates to: RSRGPSSRRCFG*GADRAARVALL
Trigger: CAAGAGCGCGACGCGCGCAGCCCTGTCAGCCCCCCACCCAAAGCAGCGGCGGCTGCTCGGACCTCGGCTTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS CCA 72 bp CCCGCCCAACAGGTCAGGGGCAAGAGTTCGCAATCCTaGGGTCGCGCGGGGCAGCAAGGGCGCGCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: PAQQVRGKSSQS*GRAGQQGRAGG
Trigger: GCCTCCAGCGCGCCCTTGCTGCCCCGCGCGACCCCAGGATTGCGAACTCTTGCCCCTGACCTGTTGGGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326524.7
ENST00000515058.5
CDS GCA 72 bp GCGGGCAGGCGGGAGGTGGGGGAGAGAACCGCAGAATaGACGTTAAGCCTGGGCTCCCTGCGGGTCCCTGCG +
Preference number: 6 (lower is better)
Translates to: AGRREVGERTAE*TLSLGSLRVPA
Trigger: CGCAGGGACCCGCAGGGAGCCCAGGCTTAACGTGCATTCTGCGGTTCTCTCCCCCACCTCCCGCCTGCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510177.5
CDS CCA 72 bp GCTGCCGCGCTCTGCGCCTCCTCTGGGCGCACTGCCTaGGAGCACGAGACTGGTTTGTCTGATGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: AAALCASSGRTA*EHETGLSDAAA
Trigger: GGCAGCAGCATCAGACAAACCAGTCTCGTGCTCCCAGGCAGTGCGCCCAGAGGAGGCGCAGAGCGCGGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS CAA 90 bp CTCTGCGCCTCCTCTGGGCGCACTGCCTGGGAGCACGAGACTGGTTaGTCTGATGCTGCTGCCGGAGCTGAGGTCTTGCCTGGAGATCCG +
Preference number: 6 (lower is better)
Translates to: LCASSGRTAWEHETG*SDAAAGAEVLPGDP
Trigger: CGGATCTCCAGGCAAGACCTCAGCTCCGGCAGCAGCATCAGACAAACCAGTCTCGTGCTCCCAGGCAGTGCGCCCAGAGGAGGCGCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS CAA 90 bp GAGCACGAGACTGGTTTGTCTGATGCTGCTGCCGGAGCTGAGGTCTaGCCTGGAGATCCGAACGAGACACCACGTCAACCGGCGCGGGGA +
Preference number: 6 (lower is better)
Translates to: EHETGLSDAAAGAEV*PGDPNETPRQPARG
Trigger: TCCCCGCGCCGGTTGACGTGGTGTCTCGTTCGGATCTCCAGGCAAGACCTCAGCTCCGGCAGCAGCATCAGACAAACCAGTCTCGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS CAA 72 bp TCCTCTGGGCGCACTGCCTGGGAGCACGAGACTGGTTaGTCTGATGCTGCTGCCGGAGCTGAGGTCTTGCCT +
Preference number: 6 (lower is better)
Translates to: SSGRTAWEHETG*SDAAAGAEVLP
Trigger: AGGCAAGACCTCAGCTCCGGCAGCAGCATCAGACAAACCAGTCTCGTGCTCCCAGGCAGTGCGCCCAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS GCA 72 bp CTGGTTTGTCTGATGCTGCTGCCGGAGCTGAGGTCTTaGCTGGAGATCCGAACGAGACACCACGTCAACCGG +
Preference number: 6 (lower is better)
Translates to: LVCLMLLPELRS*LEIRTRHHVNR
Trigger: CCGGTTGACGTGGTGTCTCGTTCGGATCTCCAGGCAAGACCTCAGCTCCGGCAGCAGCATCAGACAAACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS CCA 72 bp CCTCTGGCCTCTCCGACCTTTTCCTCTGGAATTCTCTaGGTTGGCAGCTGCAGCCTGCCGATTCCGCTCTCT +
Preference number: 6 (lower is better)
Translates to: PLASPTFSSGIL*VGSCSLPIPLS
Trigger: AGAGAGCGGAATCGGCAGGCTGCAGCTGCCAACCCAGAGAATTCCAGAGGAAAAGGTCGGAGAGGCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS CAA 90 bp TTGCCCCTCTGGCCTCTCCGACCTTTTCCTCTGGAATTCTCTGGGTaGGCAGCTGCAGCCTGCCGATTCCGCTCTCTTCTAGGAAGCACT +
Preference number: 6 (lower is better)
Translates to: LPLWPLRPFPLEFSG*AAAACRFRSLLGST
Trigger: AGTGCTTCCTAGAAGAGAGCGGAATCGGCAGGCTGCAGCTGCCAACCCAGAGAATTCCAGAGGAAAAGGTCGGAGAGGCCAGAGGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS CAA 72 bp ACTGGTTTGTCTGATGCTGCTGCCGGAGCTGAGGTCTaGCCTGGAGATCCGAACGAGACACCACGTCAACCG +
Preference number: 6 (lower is better)
Translates to: TGLSDAAAGAEV*PGDPNETPRQP
Trigger: CGGTTGACGTGGTGTCTCGTTCGGATCTCCAGGCAAGACCTCAGCTCCGGCAGCAGCATCAGACAAACCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326524.7
CDS GCA 72 bp CCGACCTTTTCCTCTGGAATTCTCTGGGTTGGCAGCTaGAGCCTGCCGATTCCGCTCTCTTCTAGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: PTFSSGILWVGS*SLPIPLSSRKH
Trigger: GTGCTTCCTAGAAGAGAGCGGAATCGGCAGGCTGCAGCTGCCAACCCAGAGAATTCCAGAGGAAAAGGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS CAA 72 bp TGGCCTCTCCGACCTTTTCCTCTGGAATTCTCTGGGTaGGCAGCTGCAGCCTGCCGATTCCGCTCTCTTCTA +
Preference number: 6 (lower is better)
Translates to: WPLRPFPLEFSG*AAAACRFRSLL
Trigger: TAGAAGAGAGCGGAATCGGCAGGCTGCAGCTGCCAACCCAGAGAATTCCAGAGGAAAAGGTCGGAGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS GCA 72 bp TTTCCTCTGGAATTCTCTGGGTTGGCAGCTGCAGCCTaGCGATTCCGCTCTCTTCTAGGAAGCACTGCCATT +
Preference number: 6 (lower is better)
Translates to: FPLEFSGLAAAA*RFRSLLGSTAI
Trigger: AATGGCAGTGCTTCCTAGAAGAGAGCGGAATCGGCAGGCTGCAGCTGCCAACCCAGAGAATTCCAGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS GCA 72 bp CTAAAAACGACAGGTCATCATCAAAGGCGATGGGTCTaGAACATGCCTGCCCTACTTTGTCACTCACCAGCC +
Preference number: 6 (lower is better)
Translates to: LKTTGHHQRRWV*NMPALLCHSPA
Trigger: GGCTGGTGAGTGACAAAGTAGGGCAGGCATGTTGCAGACCCATCGCCTTTGATGATGACCTGTCGTTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS GCA 72 bp AGGTCATCATCAAAGGCGATGGGTCTGCAACATGCCTaGCCTACTTTGTCACTCACCAGCCTTCTATTTCTG +
Preference number: 6 (lower is better)
Translates to: RSSSKAMGLQHA*PTLSLTSLLFL
Trigger: CAGAAATAGAAGGCTGGTGAGTGACAAAGTAGGGCAGGCATGTTGCAGACCCATCGCCTTTGATGATGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS CCA 72 bp TTGCACTGTAGCAGGAATGCAATACACAGCAGTCTCTaGAGCCGGAGTCAGATACATCCACACCTTTTAGCG +
Preference number: 6 (lower is better)
Translates to: LHCSRNAIHSSL*SRSQIHPHLLA
Trigger: CGCTAAAAGGTGTGGATGTATCTGACTCCGGCTCCAGAGACTGCTGTGTATTGCATTCCTGCTACAGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000620847.1
CDS CAA 72 bp TCAAAGGCGATGGGTCTGCAACATGCCTGCCCTACTTaGTCACTCACCAGCCTTCTATTTCTGGATAAGTTT +
Preference number: 6 (lower is better)
Translates to: SKAMGLQHACPT*SLTSLLFLDKF
Trigger: AAACTTATCCAGAAATAGAAGGCTGGTGAGTGACAAAGTAGGGCAGGCATGTTGCAGACCCATCGCCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS CCA 72 bp TATCATCTAAAAACGACAGGTCATCATCAAAGGCGATaGGTCTGCAACATGCCTGCCCTACTTTGTCACTCA +
Preference number: 6 (lower is better)
Translates to: YHLKTTGHHQRR*VCNMPALLCHS
Trigger: TGAGTGACAAAGTAGGGCAGGCATGTTGCAGACCCATCGCCTTTGATGATGACCTGTCGTTTTTAGATGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS CAA 90 bp TTGTCACTCACCAGCCTTCTATTTCTGGATAAGTTTTTCAATATTTaGTCGTACGTTGTCTCAGCTGCATCGCAAGAGCCGCTGCAGTAC +
Preference number: 6 (lower is better)
Translates to: LSLTSLLFLDKFFNI*SYVVSAASQEPLQY
Trigger: GTACTGCAGCGGCTCTTGCGATGCAGCTGAGACAACGTACGACAAAATATTGAAAAACTTATCCAGAAATAGAAGGCTGGTGAGTGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS CAA 90 bp AGGTCATCATCAAAGGCGATGGGTCTGCAACATGCCTGCCCTACTTaGTCACTCACCAGCCTTCTATTTCTGGATAAGTTTTTCAATATT +
Preference number: 6 (lower is better)
Translates to: RSSSKAMGLQHACPT*SLTSLLFLDKFFNI
Trigger: AATATTGAAAAACTTATCCAGAAATAGAAGGCTGGTGAGTGACAAAGTAGGGCAGGCATGTTGCAGACCCATCGCCTTTGATGATGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS CCA 72 bp CCTGCCCTACTTTGTCACTCACCAGCCTTCTATTTCTaGATAAGTTTTTCAATATTTTGTCGTACGTTGTCT +
Preference number: 6 (lower is better)
Translates to: PALLCHSPAFYF*ISFSIFCRTLS
Trigger: AGACAACGTACGACAAAATATTGAAAAACTTATCCAGAAATAGAAGGCTGGTGAGTGACAAAGTAGGGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS TCA 72 bp CTCTCTTCTAGGAAGCACTGCCATTTGTTTATCTGGTaGCCTTTTCAGTCTTTTAATGGTGGCTTGAATAAA +
Preference number: 6 (lower is better)
Translates to: LSSRKHCHLFIW*PFQSFNGGLNK
Trigger: TTTATTCAAGCCACCATTAAAAGACTGAAAAGGTCACCAGATAAACAAATGGCAGTGCTTCCTAGAAGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326524.7
ENST00000344622.8
ENST00000381826.8
ENST00000427982.5
ENST00000515058.5
ENST00000620847.1
CDS CCA 72 bp AAAGACTGCATTTGTCTTGAAAGTTTTAATCCTCCGTaGTATACCCGAAAACCCTCTCTTGACTGGATTTTT +
Preference number: 6 (lower is better)
Translates to: KDCICLESFNPP*YTRKPSLDWIF
Trigger: AAAAATCCAGTCAAGAGAGGGTTTTCGGGTATACCACGGAGGATTAAAACTTTCAAGACAAATGCAGTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381826.8
ENST00000427982.5