RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GDF5 (Homo sapiens)

Ensembl gene IDs: ENSG00000125965

Ensembl transcript IDs: ENST00000374369.8, ENST00000374372.1

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTaGTCACATCAGCAGACGGGCAGCAATCCTCAGCCAGGGGAACTT +
Preference number: 1 (lower is better)
Translates to: LSPIQSLSPWTCACH*SHQQTGSNPQPGEL
Trigger: AAGTTCCCCTGGCTGAGGATTGCTGCCCGTCTGCTGATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR TCA 90 bp CTCAACTGTCCCAGGGACAGGAAGTCACCAGGCACAAATGTGATTTaGGGAGGCAGTGGCACCTGTGGCTCTCCTGAGAGGTGCTTAGGA +
Preference number: 1 (lower is better)
Translates to: LNCPRDRKSPGTNVI*GGSGTCGSPERCLG
Trigger: TCCTAAGCACCTCTCAGGAGAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTGGGACAGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR TCA 90 bp AGCTTCTCAACTGTCCCAGGGACAGGAAGTCACCAGGCACAAATGTaGTTTGAGGAGGCAGTGGCACCTGTGGCTCTCCTGAGAGGTGCT +
Preference number: 1 (lower is better)
Translates to: SFSTVPGTGSHQAQM*FEEAVAPVALLRGA
Trigger: AGCACCTCTCAGGAGAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTGGGACAGTTGAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR-3UTR GCA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGGGGGCTCTTGGGATGTaGCACCCAGGAAGACAGAGG +
Preference number: 2 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLGALGM*HPGRQR
Trigger: CCTCTGTCTTCCTGGGTGGCACATCCCAAGAGCCCC...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR-3UTR TCA 90 bp TCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCTTCCTGACCCCTCTGTaGTTCCAGGAGTGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: SVPFRVCLPGPVPATGHIFLTPL*FQECRK
Trigger: CTTCCTGCACTCCTGGAATCACAGAGGGGTCAGGAA...GATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR-3UTR TCA 90 bp ATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGTTCCTGACCCCTCTGTaGTTCCAGGAGTGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: IGKHCFLGLSPIQSLSPWFLTPL*FQECRK
Trigger: CTTCCTGCACTCCTGGAATCACAGAGGGGTCAGGAA...CCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR-3UTR CCA 90 bp AAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCACAGCTGCAGGAAGGGGCTCTTaGGATGTGCCACCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: KLIGIPFHPSCVDAPATAAGRGS*DVPPRK
Trigger: CTTCCTGGGTGGCACATCCCAAGAGCCCCTTCCTGC...AGCTGTGGCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR-3UTR GCA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTCCCAAGCTGTGTAGATaGTCCTGCCACAGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPPKLCR*SCHSFL
Trigger: CAGGAAGCTGTGGCAGGAGCATCTACACAGCTTGGG...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR-3UTR CCA 90 bp CATCAGCAGACGGGCAGCAATCCTCAGCCAGGGGAACTTGTGGATAAAAGGGGGAGCGAGCAAGCTTATTaGAATCCCCTTTCACCCAAG +
Preference number: 2 (lower is better)
Translates to: HQQTGSNPQPGELVDKRGSEQAY*NPLSPK
Trigger: CTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT...CCCCCTTTTATCCACAAGTTCCCCTGGCTGAGGATTGCTGCCCGTCTGCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR CCA 72 bp CCCCTCTGTGATTCCAGGAGTGCAGGAAGGGGCTCTTaGGATGTGCCACCCAGGAAGACAGAGGGCCAGTGC +
Preference number: 3 (lower is better)
Translates to: PLCDSRSAGRGS*DVPPRKTEGQC
Trigger: GCACTGGCCCTCTGTCTTCCTGGGTGGCACATCCCAAGAGCCCCTTCCTGCACTCCTGGAATCACAGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR-3UTR CAA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGCAGGAAGGGGCTCTaGGGATGTGCCACCCAGGAA +
Preference number: 3 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLCRKGL*GCATQE
Trigger: TTCCTGGGTGGCACATCCCAAGAGCCCCTTCCTGCA...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR CCA 72 bp ATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTaGTCACATCAGCAGACGGGCAGCAATCCTCAGCCA +
Preference number: 3 (lower is better)
Translates to: IQSLSPWTCACH*SHQQTGSNPQP
Trigger: TGGCTGAGGATTGCTGCCCGTCTGCTGATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR-3UTR CAA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTTGCAGGAAGGGGCTCTaGGGATGTGCCACCCAGGAA +
Preference number: 3 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPCRKGL*GCATQE
Trigger: TTCCTGGGTGGCACATCCCAAGAGCCCCTTCCTGCA...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
3UTR-3UTR CAA 90 bp CAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGGCTCGAGCGAGCAAGCTTATaGGAATCCCCTTTCACCCAA +
Preference number: 3 (lower is better)
Translates to: QEVTRHKCDLRRQWHLWLERASL*ESPFTQ
Trigger: TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTC...GAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp TCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCGGAGGTCCACGGCCCTaGCCCGTTCCCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SVPFRVCLPGPVPATGHIGGPRP*PVPRPP
Trigger: TGGAGGCCTGGGAACGGGGCAGGGCCGTGGACCTCC...GATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCCGGGGGCCGCTGGCTTaGCCGTGTCCGAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SVPFRVCLPGPVPATGHIRGPLA*PCPRAS
Trigger: AGAAGCCCTCGGACACGGCCAAGCCAGCGGCCCCCG...GATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCCTGGGTCGCTTGCCCTaGCGAGTGGCCAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SVPFRVCLPGPVPATGHILGRLP*RVASGA
Trigger: GGCCCCACTGGCCACTCGCCAGGGCAAGCGACCCAG...GATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGTGTGACCCCCTGGCCTaGAGACGTTCCGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLCDPLA*RRSGPG
Trigger: CCCTGGCCCGGAACGTCTTCAGGCCAGGGGGTCACA...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp TCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCGCTTTCTCGTGGACCTaGCGGGCGGCGCGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: SVPFRVCLPGPVPATGHIAFSWT*RAARSK
Trigger: CTTCGACCGCGCCGCCCGGCAGGTCCACGAGAAAGC...GATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCGAGGGTGTCCTGGCTTaGGTTCAGGGCCGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: SVPFRVCLPGPVPATGHIEGVLA*VQGRPV
Trigger: GACCGGGCGGCCCTGAACCCAAGCCAGGACACCCTC...GATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGGGGGCCCGGGCTCCCTaGCCTTCTTCAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLGARAP*PSSAGR
Trigger: CCTTCCTGCTGAAGAAGGCCAGGGAGCCCGGGCCCC...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CATCAGCAGACGGGCAGCAATCCTCAGCCAGGGGAACTTGTGGATAAAAGGGGGGGCCGCTGGGGCAGCTaGACAGCTTCAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HQQTGSNPQPGELVDKRGGRWGS*TASAGQ
Trigger: CTGCCCAGCTGAAGCTGTCCAGCTGCCCCAGCGGCC...CCCCCTTTTATCCACAAGTTCCCCTGGCTGAGGATTGCTGCCCGTCTGCTGATG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CCACAGCTTCCTGACCCCTCTGTGATTCCAGGAGTGCAGGAAGGGGCTCTTGGGAGATCCGTCCAGGCCTaGCACGGAGCGCACATCCAG +
Preference number: 4 (lower is better)
Translates to: PQLPDPSVIPGVQEGALGRSVQA*HGAHIQ
Trigger: CTGGATGTGCGCTCCGTGCCAGGCCTGGACGGATCT...CCCAAGAGCCCCTTCCTGCACTCCTGGAATCACAGAGGGGTCAGGAAGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGGCTCGCTTGCCCTGGCGAGTaGCCAGTGGGGCCCGCCGTT +
Preference number: 4 (lower is better)
Translates to: QEVTRHKCDLRRQWHLWLACPGE*PVGPAV
Trigger: AACGGCGGGCCCCACTGGCCACTCGCCAGGGCAAGC...GAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGGCTTGCCCTGGCGAGTaGCCAGTGGGGCCCGCCGTT +
Preference number: 4 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLACPGE*PVGPAV
Trigger: AACGGCGGGCCCCACTGGCCACTCGCCAGGGCAAGC...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTCTCCTTGGGCTCTCGTaGGGGCCCGGGCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: AESHRKALFPGTQSHSESLLGLS*GPGLPG
Trigger: GCCAGGGAGCCCGGGCCCCCACGAGAGCCCAAGGAG...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCCTGGCGAGTGGCCAGTaGGGCCCGCCGTTTTCGCCG +
Preference number: 4 (lower is better)
Translates to: LVDKRGPLAQVTLRERASLASGQ*GPPFSP
Trigger: CGGCGAAAACGGCGGGCCCCACTGGCCACTCGCCAG...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CCACAGCTTCCTGACCCCTCTGTGATTCCAGGAGTGCAGGAAGGGGCTCTTGGGGCAGGAAGGGGCTCTTaGGATGTGCCACCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PQLPDPSVIPGVQEGALGAGRGS*DVPPRK
Trigger: CTTCCTGGGTGGCACATCCCAAGAGCCCCTTCCTGC...CCCAAGAGCCCCTTCCTGCACTCCTGGAATCACAGAGGGGTCAGGAAGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CCACAGCTTCCTGACCCCTCTGTGATTCCAGGAGTGCAGGAAGGGGCTCTTGGGACCTGTGCCTGCCACTaGTCACATCAGCAGACGGGC +
Preference number: 4 (lower is better)
Translates to: PQLPDPSVIPGVQEGALGTCACH*SHQQTG
Trigger: GCCCGTCTGCTGATGTGACCAGTGGCAGGCACAGGT...CCCAAGAGCCCCTTCCTGCACTCCTGGAATCACAGAGGGGTCAGGAAGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp CCACAGCTTCCTGACCCCTCTGTGATTCCAGGAGTGCAGGAAGGGGCTCTTGGGTGGCCAGCCGCTGAATaGCACCAAAGAGAACAGCGG +
Preference number: 4 (lower is better)
Translates to: PQLPDPSVIPGVQEGALGWPAAE*HQREQR
Trigger: CCGCTGTTCTCTTTGGTGTCATTCAGCGGCTGGCCA...CCCAAGAGCCCCTTCCTGCACTCCTGGAATCACAGAGGGGTCAGGAAGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGAGGTCCACGGCCCTaGCCCGTTCCCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPGGPRP*PVPRPP
Trigger: TGGAGGCCTGGGAACGGGGCAGGGCCGTGGACCTCC...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGTCTTGCTGGGTCGCTTaGCCTGGCGAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLSCWVA*PGEWPV
Trigger: CACTGGCCACTCGCCAGGGCAAGCGACCCAGCAAGA...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCGAGGGTGTCCTGGCTTaGGTTCAGGGCCGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: LVDKRGPLAQVTLRERASEGVLA*VQGRPV
Trigger: GACCGGGCGGCCCTGAACCCAAGCCAGGACACCCTC...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGCTCCTTGGGCTCTCGTaGGGGCCCGGGCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KSHSESEQAYWNPLSPKLLLGLS*GPGLPG
Trigger: GCCAGGGAGCCCGGGCCCCCACGAGAGCCCAAGGAG...CAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGGCGAAACGGCTCCTTaGGCTCTCGTGGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: AESHRKALFPGTQSHSESGETAP*ALVGAR
Trigger: CCGGGCCCCCACGAGAGCCCAAGGAGCCGTTTCGCC...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGCGAAACGGCTCCTTaGGCTCTCGTGGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPGETAP*ALVGAR
Trigger: CCGGGCCCCCACGAGAGCCCAAGGAGCCGTTTCGCC...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCGGGGGCCGCTGGCTTaGCCGTGTCCGAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SEQAYWNPLSPKLCRCSCRGPLA*PCPRAS
Trigger: AGAAGCCCTCGGACACGGCCAAGCCAGCGGCCCCCG...GCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCCGGCTGCCGGCCGCTaGGGCAGCTGGACAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SEQAYWNPLSPKLCRCSCPAAGR*GSWTAS
Trigger: TGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGG...GCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTCCGGCTGCCGGCCGCTaGGGCAGCTGGACAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AESHRKALFPGTQSHSESPAAGR*GSWTAS
Trigger: TGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGG...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCAGTGGGCACACAGCAGGTaGGTGGTGTGGACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: SPIQSLSPWTCACHWSHQWAHSR*VVWTRG
Trigger: ACCCCGAGTCCACACCACCCACCTGCTGTGTGCCCA...CTGATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp CCACAGCTTCCTGACCCCTCTGTGATTCCAGGAGTGCAGGAAGGGGCTCTTGGGCCTCTGGCCAGCCGCTaGATGACACCAAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: PQLPDPSVIPGVQEGALGPLASR*MTPKRT
Trigger: TGTTCTCTTTGGTGTCATTCAGCGGCTGGCCAGAGG...CCCAAGAGCCCCTTCCTGCACTCCTGGAATCACAGAGGGGTCAGGAAGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTTGTGACCCCCTGGCCTaGAGACGTTCCGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPCDPLA*RRSGPG
Trigger: CCCTGGCCCGGAACGTCTTCAGGCCAGGGGGTCACA...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCAGGTCCGGGCTGTAGCCTaGCTTGTTTGGGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SPIQSLSPWTCACHWSHQVRAVA*LVWGGC
Trigger: ACACCCTCCCCAAACAAGGCAGGCTACAGCCCGGAC...CTGATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGCTTTCTCGTGGACCTaGCGGGCGGCGCGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPAFSWT*RAARSK
Trigger: CTTCGACCGCGCCGCCCGGCAGGTCCACGAGAAAGC...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCAGGCCAGTGCTGCTACCTaGAGCCACACGACTCCACGA +
Preference number: 4 (lower is better)
Translates to: SPIQSLSPWTCACHWSHQASAAT*SHTTPR
Trigger: TCGTGGAGTCGTGTGGCTGCAGGTAGCAGCACTGGC...CTGATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCAGTGCTTTGGCCAATCCTaGCCTGGTCCCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SPIQSLSPWTCACHWSHQCFGQS*PGPLGS
Trigger: AGACCCCAGGGGACCAGGCCAGGATTGGCCAAAGCA...CTGATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCTGCCTCCCTTTGCCCTaGCATTGGCATTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SVPFRVCLPGPVPATGHICLPLP*HWHWWP
Trigger: GGGCCACCAATGCCAATGCCAGGGCAAAGGGAGGCA...GATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp ATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGCAGGGCCGCCCGGTCTaGGGGGCAGCTTTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: IGKHCFLGLSPIQSLSPWQGRPV*GAAFWV
Trigger: AACCCAAAAAGCTGCCCCCCAGACCGGGCGGCCCTG...CCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTTGGGGAGGGTGTCCTaGCTTGGGTTCAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LVDKRGPLAQVTLRERASLGRVS*LGFRAA
Trigger: GGCGGCCCTGAACCCAAGCCAGGACACCCTCCCCAA...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCGGGGCCCGGGCTCCCTaGCCTTCTTCAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SEQAYWNPLSPKLCRCSCGARAP*PSSAGR
Trigger: CCTTCCTGCTGAAGAAGGCCAGGGAGCCCGGGCCCC...GCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CCACAGCTTCCTGACCCCTCTGTGATTCCAGGAGTGCAGGAAGGGGCTCTTGGGACAGGTCCCGTTTCTTaGTGCGGCCAAACACCAGGA +
Preference number: 4 (lower is better)
Translates to: PQLPDPSVIPGVQEGALGTGPVS*CGQTPG
Trigger: TCCTGGTGTTTGGCCGCACCAAGAAACGGGACCTGT...CCCAAGAGCCCCTTCCTGCACTCCTGGAATCACAGAGGGGTCAGGAAGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGCTGGCGAGTGGCCAGTaGGGCCCGCCGTTTTCGCCG +
Preference number: 4 (lower is better)
Translates to: KSHSESEQAYWNPLSPKLLASGQ*GPPFSP
Trigger: CGGCGAAAACGGCGGGCCCCACTGGCCACTCGCCAG...CAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGCTGGGTCGCTTGCCCTaGCGAGTGGCCAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KSHSESEQAYWNPLSPKLLGRLP*RVASGA
Trigger: GGCCCCACTGGCCACTCGCCAGGGCAAGCGACCCAG...CAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGGCTCCAGGTGGGAGCGCAATaGGAACTCGCACAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QEVTRHKCDLRRQWHLWLQVGAQ*ELAQPL
Trigger: GAGGGGCTGTGCGAGTTCCCATTGCGCTCCCACCTG...GAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCCACACAGCAGGTGGGTaGTGTGGACTCGGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: SVPFRVCLPGPVPATGHIHTAGG*CGLGVH
Trigger: ATGGACCCCGAGTCCACACCACCCACCTGCTGTGTG...GATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CATCAGCAGACGGGCAGCAATCCTCAGCCAGGGGAACTTGTGGATAAAAGGGGGGCAGGAAGGGGCTCTTaGGATGTGCCACCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HQQTGSNPQPGELVDKRGAGRGS*DVPPRK
Trigger: CTTCCTGGGTGGCACATCCCAAGAGCCCCTTCCTGC...CCCCCTTTTATCCACAAGTTCCCCTGGCTGAGGATTGCTGCCCGTCTGCTGATG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp TCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCCCTCTCCTTGGCCTCTaGTTTGGCCAATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVPFRVCLPGPVPATGHIPLLGL*FGQSWP
Trigger: AGGCCAGGATTGGCCAAAGCAGAGGCCAAGGAGAGG...GATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTCCTGCTTTTGGGGGTaGCTTGCCTCCGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLSCFWG*LASGKL
Trigger: CAGCTTCCCGGAGGCAAGGCACCCCCAAAAGCAGGA...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CATCAGCAGACGGGCAGCAATCCTCAGCCAGGGGAACTTGTGGATAAAAGGGGGAAGACAGAGGGCCAGTaGTGCTACCTGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: HQQTGSNPQPGELVDKRGKTEGQ*CYLQPH
Trigger: GTGTGGCTGCAGGTAGCAGCACTGGCCCTCTGTCTT...CCCCCTTTTATCCACAAGTTCCCCTGGCTGAGGATTGCTGCCCGTCTGCTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCAGGGCCGCCCGGTCTaGGGGGCAGCTTTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: SEQAYWNPLSPKLCRCSCQGRPV*GAAFWV
Trigger: AACCCAAAAAGCTGCCCCCCAGACCGGGCGGCCCTG...GCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTTTGGGGAGGGTGTCCTaGCTTGGGTTCAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: AESHRKALFPGTQSHSESLGRVS*LGFRAA
Trigger: GGCGGCCCTGAACCCAAGCCAGGACACCCTCCCCAA...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CCACAGCTTCCTGACCCCTCTGTGATTCCAGGAGTGCAGGAAGGGGCTCTTGGGTCAGCAGGAAGGAGCTaGGGACAGATCCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PQLPDPSVIPGVQEGALGSAGRS*GQILLL
Trigger: CAAAAGCAGGATCTGTCCCCAGCTCCTTCCTGCTGA...CCCAAGAGCCCCTTCCTGCACTCCTGGAATCACAGAGGGGTCAGGAAGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCACAGCTGGCCGCTGGGGCAGCTaGACAGCTTCAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KLIGIPFHPSCVDAPATAGRWGS*TASAGQ
Trigger: CTGCCCAGCTGAAGCTGTCCAGCTGCCCCAGCGGCC...AGCTGTGGCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCCAGGTGGGAGCGCAATaGGAACTCGCACAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LVDKRGPLAQVTLRERASQVGAQ*ELAQPL
Trigger: GAGGGGCTGTGCGAGTTCCCATTGCGCTCCCACCTG...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTTGGGACTCAGCCGCGTaGGCACACAGCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPWDSAA*AHSRWV
Trigger: CACCCACCTGCTGTGTGCCCACGCGGCTGAGTCCCA...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CATCAGCAGACGGGCAGCAATCCTCAGCCAGGGGAACTTGTGGATAAAAGGGGGTCTCGTATCCAGACGTaGACCGTCTCCAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: HQQTGSNPQPGELVDKRGSRIQT*TVSSQQ
Trigger: CTGCTGACTGGAGACGGTGCACGTCTGGATACGAGA...CCCCCTTTTATCCACAAGTTCCCCTGGCTGAGGATTGCTGCCCGTCTGCTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGTCTCGTATCCAGACGTaGACCGTCTCCAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLSRIQT*TVSSQQ
Trigger: CTGCTGACTGGAGACGGTGCACGTCTGGATACGAGA...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCGTCCGGGCTGTAGCCTaGCTTGTTTGGGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LVDKRGPLAQVTLRERASVRAVA*LVWGGC
Trigger: ACACCCTCCCCAAACAAGGCAGGCTACAGCCCGGAC...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp GGTGAGGAGAAATGGTGGGCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTTCCTGCTTTTGGGGGTaGCTTGCCTCCGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GEEKWWAESHRKALFPGTSCFWG*LASGKL
Trigger: CAGCTTCCCGGAGGCAAGGCACCCCCAAAAGCAGGA...AGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGCCCACCATTTCTCCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTTCTTGCTGGGTCGCTTaGCCTGGCGAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPSCWVA*PGEWPV
Trigger: CACTGGCCACTCGCCAGGGCAAGCGACCCAGCAAGA...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCAGGGTCTGGATGACTaGATGATTCGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLQGLDD*MIRGLQ
Trigger: CTGGAGCCCACGAATCATGCAGTCATCCAGACCCTG...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCGCCAGTGCTGCTACCTaGAGCCACACGACTCCACGA +
Preference number: 4 (lower is better)
Translates to: LVDKRGPLAQVTLRERASASAAT*SHTTPR
Trigger: TCGTGGAGTCGTGTGGCTGCAGGTAGCAGCACTGGC...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTGCTTTGGCCAATCCTaGCCTGGTCCCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LVDKRGPLAQVTLRERASCFGQS*PGPLGS
Trigger: AGACCCCAGGGGACCAGGCCAGGATTGGCCAAAGCA...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCATAGCTGTGACCCCCTaGCCTGAAGACGTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: LVDKRGPLAQVTLRERASIAVTP*PEDVPG
Trigger: GCCCGGAACGTCTTCAGGCCAGGGGGTCACAGCTAT...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGGGGAAGCTGTCCTTTTaGGGTCACAGTCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLGKLSF*GHSPGC
Trigger: ACAGCCCGGACTGTGACCCCAAAAGGACAGCTTCCC...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp GGTGAGGAGAAATGGTGGGCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTGACAGATCCTGCTTTTaGGGGTGCCTTGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GEEKWWAESHRKALFPGTDRSCF*GCLASG
Trigger: CCCGGAGGCAAGGCACCCCCAAAAGCAGGATCTGTC...AGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGCCCACCATTTCTCCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGAGATCCGTCCAGGCCTaGCACGGAGCGCACATCCAG +
Preference number: 4 (lower is better)
Translates to: PKSHSESEQAYWNPLSPKRSVQA*HGAHIQ
Trigger: CTGGATGTGCGCTCCGTGCCAGGCCTGGACGGATCT...CTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGACAGGTCCCGTTTCTTaGTGCGGCCAAACACCAGGA +
Preference number: 4 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLTGPVS*CGQTPG
Trigger: TCCTGGTGTTTGGCCGCACCAAGAAACGGGACCTGT...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGACGGTCTTATCGTCCTaGCCAGAGCGGGCCTTAATC +
Preference number: 4 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLTVLSS*PERALI
Trigger: GATTAAGGCCCGCTCTGGCCAGGACGATAAGACCGT...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CATCAGCAGACGGGCAGCAATCCTCAGCCAGGGGAACTTGTGGATAAAAGGGGGCGCCGTTTTCGCCGCTaGCTGAACAGGTACTCATAC +
Preference number: 4 (lower is better)
Translates to: HQQTGSNPQPGELVDKRGRRFRR*LNRYSY
Trigger: GTATGAGTACCTGTTCAGCCAGCGGCGAAAACGGCG...CCCCCTTTTATCCACAAGTTCCCCTGGCTGAGGATTGCTGCCCGTCTGCTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGGCTCCACAGCCCCTCGCAGTaGAAAGCCTCGTACTCAAGG +
Preference number: 4 (lower is better)
Translates to: QEVTRHKCDLRRQWHLWLHSPSQ*KASYSR
Trigger: CCTTGAGTACGAGGCTTTCCACTGCGAGGGGCTGTG...GAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCACAGCTTGGGACTCAGCCGCGTaGGCACACAGCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: KLIGIPFHPSCVDAPATAWDSAA*AHSRWV
Trigger: CACCCACCTGCTGTGTGCCCACGCGGCTGAGTCCCA...AGCTGTGGCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCAGGTGAGGAGAAATaGTGGGCTGAGTCTCATCGG +
Preference number: 4 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLPGEEK*WAESHR
Trigger: CCGATGAGACTCAGCCCACCATTTCTCCTCACCTGG...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGCCTCTGGCCAGCCGCTaGATGACACCAAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLPLASR*MTPKRT
Trigger: TGTTCTCTTTGGTGTCATTCAGCGGCTGGCCAGAGG...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp AGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCGTACCTCTGCTTCCTaGCCACGGGACCTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: SEQAYWNPLSPKLCRCSCRTSAS*PRDLGH
Trigger: ATGACCGAGGTCCCGTGGTCAGGAAGCAGAGGTACG...GCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp CATCAGCAGACGGGCAGCAATCCTCAGCCAGGGGAACTTGTGGATAAAAGGGGGTCATCAGGGTCTGGATaGCTGCATGATTCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: HQQTGSNPQPGELVDKRGSSGSG*LHDSWA
Trigger: AGCCCACGAATCATGCAGTCATCCAGACCCTGATGA...CCCCCTTTTATCCACAAGTTCCCCTGGCTGAGGATTGCTGCCCGTCTGCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp GGTGAGGAGAAATGGTGGGCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCACCTGTGGCTCTCCTaGGAGGTGCTTAGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GEEKWWAESHRKALFPGTHLWLS*EVLRRV
Trigger: GACTCTCCTAAGCACCTCTCAGGAGAGCCACAGGTG...AGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGCCCACCATTTCTCCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp TCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCCACCAGGCACAAATGTaGTTTGAGGAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SVPFRVCLPGPVPATGHIHQAQM*FEEAVA
Trigger: TGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTG...GATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGGGTCCCGTTTCTTGGTaGGGCCAAACACCAGGAACA +
Preference number: 4 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLGPVSW*GQTPGT
Trigger: TGTTCCTGGTGTTTGGCCGCACCAAGAAACGGGACC...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCACAGAGGGCCAGTGCTaGTACCTGCAGCCACACGAC +
Preference number: 4 (lower is better)
Translates to: SEQAYWNPLSPKLCRCSCTEGQC*YLQPHD
Trigger: GTCGTGTGGCTGCAGGTAGCAGCACTGGCCCTCTGT...GCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCGGGGCTCTTGGGATGTaGCACCCAGGAAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: SEQAYWNPLSPKLCRCSCGALGM*HPGRQR
Trigger: CCTCTGTCTTCCTGGGTGGCACATCCCAAGAGCCCC...GCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGGCTCCTGTGTAGATGCTCCTaGCACAGCTTCCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: QEVTRHKCDLRRQWHLWLLCRCS*HSFLTP
Trigger: AGGGGTCAGGAAGCTGTGGCAGGAGCATCTACACAG...GAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp ATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGGGCTCTCCTGAGAGGTaGTTAGGAGAGTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: IGKHCFLGLSPIQSLSPWGSPER*LGESRG
Trigger: GCCTCTGGACTCTCCTAAGCACCTCTCAGGAGAGCC...CCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp GCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAACCTTGGCCTCTGCTTTaGCCAATCCTGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: AQVTLRERASLLESPFTQPWPLL*PILAWS
Trigger: GGACCAGGCCAGGATTGGCCAAAGCAGAGGCCAAGG...TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGTGCCTCCCTTTGCCCTaGCATTGGCATTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PKSHSESEQAYWNPLSPKCLPLP*HWHWWP
Trigger: GGGCCACCAATGCCAATGCCAGGGCAAAGGGAGGCA...CTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp ATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGGGGAAGCTGTCCTTTTaGGGTCACAGTCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: IGKHCFLGLSPIQSLSPWGKLSF*GHSPGC
Trigger: ACAGCCCGGACTGTGACCCCAAAAGGACAGCTTCCC...CCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGGACAGATCCTGCTTTTaGGGGTGCCTTGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: PKSHSESEQAYWNPLSPKDRSCF*GCLASG
Trigger: CCCGGAGGCAAGGCACCCCCAAAAGCAGGATCTGTC...CTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCACACAGCAGGTGGGTaGTGTGGACTCGGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: PKSHSESEQAYWNPLSPKHTAGG*CGLGVH
Trigger: ATGGACCCCGAGTCCACACCACCCACCTGCTGTGTG...CTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTTGGGCACACAGCAGGTaGGTGGTGTGGACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: SHSESEQAYWNPLSPKLCWAHSR*VVWTRG
Trigger: ACCCCGAGTCCACACCACCCACCTGCTGTGTGCCCA...ACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTTGGCCAGCCGCTGAATaGCACCAAAGAGAACAGCGG +
Preference number: 4 (lower is better)
Translates to: AESHRKALFPGTQSHSESWPAAE*HQREQR
Trigger: CCGCTGTTCTCTTTGGTGTCATTCAGCGGCTGGCCA...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp AAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAACGTACCTCTGCTTCCTaGCCACGGGACCTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: KRGPLAQVTLRERASLLERTSAS*PRDLGH
Trigger: ATGACCGAGGTCCCGTGGTCAGGAAGCAGAGGTACG...TTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCGGCAGCAGCGAAGGTaGCTCTGGTTTGGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SEQAYWNPLSPKLCRCSCRQQRR*LWFGRK
Trigger: TTTCCTGCCAAACCAGAGGCACCTTCGCTGCTGCCG...GCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGCCCGGTGCCTCCCTTTaGCCTGGCATTGGCATTGGT +
Preference number: 4 (lower is better)
Translates to: KSHSESEQAYWNPLSPKLPGASL*PGIGIG
Trigger: ACCAATGCCAATGCCAGGGCAAAGGGAGGCACCGGG...CAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp TCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTCCCGGTGCCTCCCTTTaGCCTGGCATTGGCATTGGT +
Preference number: 4 (lower is better)
Translates to: SHSESEQAYWNPLSPKLCPGASL*PGIGIG
Trigger: ACCAATGCCAATGCCAGGGCAAAGGGAGGCACCGGG...ACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTCTTTTGGGGGTGCCTTaGCTCCGGGAAGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: AESHRKALFPGTQSHSESLLGVP*LREAVL
Trigger: AAGGACAGCTTCCCGGAGGCAAGGCACCCCCAAAAG...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp GGTGAGGAGAAATGGTGGGCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTGAAGTTGACATGCAGTaGCTTCCGACTGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: GEEKWWAESHRKALFPGTEVDMQ*LPTAAS
Trigger: GCTCGCTGCAGTCGGAAGGCACTGCATGTCAACTTC...AGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGCCCACCATTTCTCCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCAGTCCTTGAAGTTGACATaGAGTGCCTTCCGACTGCAG +
Preference number: 4 (lower is better)
Translates to: SPIQSLSPWTCACHWSHQSLKLT*SAFRLQ
Trigger: CTGCAGTCGGAAGGCACTGCATGTCAACTTCAAGGA...CTGATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CATCAGCAGACGGGCAGCAATCCTCAGCCAGGGGAACTTGTGGATAAAAGGGGGTCCTTGAAGTTGACATaGAGTGCCTTCCGACTGCAG +
Preference number: 4 (lower is better)
Translates to: HQQTGSNPQPGELVDKRGSLKLT*SAFRLQ
Trigger: CTGCAGTCGGAAGGCACTGCATGTCAACTTCAAGGA...CCCCCTTTTATCCACAAGTTCCCCTGGCTGAGGATTGCTGCCCGTCTGCTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAAACAGAGGGCCAGTGCTaGTACCTGCAGCCACACGAC +
Preference number: 4 (lower is better)
Translates to: KRGPLAQVTLRERASLLETEGQC*YLQPHD
Trigger: GTCGTGTGGCTGCAGGTAGCAGCACTGGCCCTCTGT...TTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp GGTGAGGAGAAATGGTGGGCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCTGTGTAGATGCTCCTaGCACAGCTTCCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: GEEKWWAESHRKALFPGTLCRCS*HSFLTP
Trigger: AGGGGTCAGGAAGCTGTGGCAGGAGCATCTACACAG...AGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGCCCACCATTTCTCCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTATAGCTGTGACCCCCTaGCCTGAAGACGTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: SHSESEQAYWNPLSPKLCIAVTP*PEDVPG
Trigger: GCCCGGAACGTCTTCAGGCCAGGGGGTCACAGCTAT...ACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGGCTCTCAGCAGGAAGGAGCTaGGGACAGATCCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: QEVTRHKCDLRRQWHLWLSAGRS*GQILLL
Trigger: CAAAAGCAGGATCTGTCCCCAGCTCCTTCCTGCTGA...GAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTACCTGTGCCTGCCACTaGTCACATCAGCAGACGGGC +
Preference number: 4 (lower is better)
Translates to: SHSESEQAYWNPLSPKLCTCACH*SHQQTG
Trigger: GCCCGTCTGCTGATGTGACCAGTGGCAGGCACAGGT...ACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCAGGGTGAGGAGAAATGGTaGGCTGAGTCTCATCGGAAA +
Preference number: 4 (lower is better)
Translates to: SPIQSLSPWTCACHWSHQGEEKW*AESHRK
Trigger: TTTCCGATGAGACTCAGCCCACCATTTCTCCTCACC...CTGATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTTTTCGCCGCTGGCTaGACAGGTACTCATACACGG +
Preference number: 4 (lower is better)
Translates to: AESHRKALFPGTQSHSESVFAAG*TGTHTR
Trigger: CCGTGTATGAGTACCTGTTCAGCCAGCGGCGAAAAC...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGTTTTCGCCGCTGGCTaGACAGGTACTCATACACGG +
Preference number: 4 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPVFAAG*TGTHTR
Trigger: CCGTGTATGAGTACCTGTTCAGCCAGCGGCGAAAAC...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp AAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAACACCTGTGGCTCTCCTaGGAGGTGCTTAGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: KRGPLAQVTLRERASLLEHLWLS*EVLRRV
Trigger: GACTCTCCTAAGCACCTCTCAGGAGAGCCACAGGTG...TTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp ATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGGGCACAAATGTGATTTaGGGAGGCAGTGGCACCTGT +
Preference number: 4 (lower is better)
Translates to: IGKHCFLGLSPIQSLSPWGTNVI*GGSGTC
Trigger: ACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCC...CCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp ATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGCACCAGGCACAAATGTaGTTTGAGGAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: IGKHCFLGLSPIQSLSPWHQAQM*FEEAVA
Trigger: TGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTG...CCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp TCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCGAGACTCTTGAAGTCTaGCGGGTGTGTGTTTGTATC +
Preference number: 4 (lower is better)
Translates to: SVPFRVCLPGPVPATGHIETLEV*RVCVCI
Trigger: GATACAAACACACACCCGGCAGACTTCAAGAGTCTC...GATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp TCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTCCTCTCCTTGGCCTCTaGTTTGGCCAATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SHSESEQAYWNPLSPKLCPLLGL*FGQSWP
Trigger: AGGCCAGGATTGGCCAAAGCAGAGGCCAAGGAGAGG...ACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCACAGCTCTTTTGGGGGTGCCTTaGCTCCGGGAAGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: KLIGIPFHPSCVDAPATALLGVP*LREAVL
Trigger: AAGGACAGCTTCCCGGAGGCAAGGCACCCCCAAAAG...AGCTGTGGCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCCCTCCAACTTCACGCTaGTGTTGCCTCCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LVDKRGPLAQVTLRERASPPTSR*CCLPFC
Trigger: ACAGAAAGGGAGGCAACAGCAGCGTGAAGTTGGAGG...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGGGTCCCGTTTCTTGGTaGGGCCAAACACCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PKSHSESEQAYWNPLSPKGPVSW*GQTPGT
Trigger: TGTTCCTGGTGTTTGGCCGCACCAAGAAACGGGACC...CTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp GCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGAAGTTGACATGCAGTaGCTTCCGACTGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: AQVTLRERASLLESPFTQEVDMQ*LPTAAS
Trigger: GCTCGCTGCAGTCGGAAGGCACTGCATGTCAACTTC...TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp GCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAACAGGGTCTGGATGACTaGATGATTCGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AQVTLRERASLLESPFTQQGLDD*MIRGLQ
Trigger: CTGGAGCCCACGAATCATGCAGTCATCCAGACCCTG...TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAAAAGACAGAGGGCCAGTaGTGCTACCTGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: KRGPLAQVTLRERASLLEKTEGQ*CYLQPH
Trigger: GTGTGGCTGCAGGTAGCAGCACTGGCCCTCTGTCTT...TTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAAGGCTCTCCTGAGAGGTaGTTAGGAGAGTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KRGPLAQVTLRERASLLEGSPER*LGESRG
Trigger: GCCTCTGGACTCTCCTAAGCACCTCTCAGGAGAGCC...TTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGCTTCTCTCCCACTCTTaGCCAGTCAGCTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLLLSHS*PVSFST
Trigger: AGTTGAGAAGCTGACTGGGCAAGAGTGGGAGAGAAG...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGGCTCCAGCGAAGGTGCCTCTaGTTTGGCAGGAAAAACCAT +
Preference number: 4 (lower is better)
Translates to: QEVTRHKCDLRRQWHLWLQRRCL*FGRKNH
Trigger: ATGGTTTTTCCTGCCAAACCAGAGGCACCTTCGCTG...GAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp GCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAACGGTCTTATCGTCCTaGCCAGAGCGGGCCTTAATC +
Preference number: 4 (lower is better)
Translates to: AQVTLRERASLLESPFTQTVLSS*PERALI
Trigger: GATTAAGGCCCGCTCTGGCCAGGACGATAAGACCGT...TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCGCCGTTTTCGCCGCTaGCTGAACAGGTACTCATAC +
Preference number: 4 (lower is better)
Translates to: SEQAYWNPLSPKLCRCSCRRFRR*LNRYSY
Trigger: GTATGAGTACCTGTTCAGCCAGCGGCGAAAACGGCG...GCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAACACAGCCCCTCGCAGTaGAAAGCCTCGTACTCAAGG +
Preference number: 4 (lower is better)
Translates to: KRGPLAQVTLRERASLLEHSPSQ*KASYSR
Trigger: CCTTGAGTACGAGGCTTTCCACTGCGAGGGGCTGTG...TTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCAGAGCGAGCAAGCTTATTaGAATCCCCTTTCACCCAAG +
Preference number: 4 (lower is better)
Translates to: SPIQSLSPWTCACHWSHQSEQAY*NPLSPK
Trigger: CTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT...CTGATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGGAAAGCACTGTTTCCTaGGACTCAGTCCCATTCAGA +
Preference number: 4 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLESTVS*DSVPFR
Trigger: TCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTC...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTTCATCAGGGTCTGGATaGCTGCATGATTCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPSSGSG*LHDSWA
Trigger: AGCCCACGAATCATGCAGTCATCCAGACCCTGATGA...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp TCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTTTCCTGACCCCTCTGTaGTTCCAGGAGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SHSESEQAYWNPLSPKLCFLTPL*FQECRK
Trigger: CTTCCTGCACTCCTGGAATCACAGAGGGGTCAGGAA...ACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTAAGTGTTATGCTGCCTaGAGCTTCTCGGAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: AESHRKALFPGTQSHSESKCYAA*SFSERL
Trigger: CAGACGCTCCGAGAAGCTTCAGGCAGCATAACACTT...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374372.1
CDS-3UTR GCA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGGAGACTCTTGAAGTCTaGCGGGTGTGTGTTTGTATC +
Preference number: 4 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLETLEV*RVCVCI
Trigger: GATACAAACACACACCCGGCAGACTTCAAGAGTCTC...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGGCTCGGACCTCGGTCATCTTaGCCTTTGTCAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: QEVTRHKCDLRRQWHLWLGPRSS*PLSIKL
Trigger: CAGCTTTATTGACAAAGGGCAAGATGACCGAGGTCC...GAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp GCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAATCAAACACGTACCTCTaGTTCCTGACCACGGGACCT +
Preference number: 4 (lower is better)
Translates to: AQVTLRERASLLESPFTQSNTYL*FLTTGP
Trigger: AGGTCCCGTGGTCAGGAAGCAGAGGTACGTGTTTGA...TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCACAGCTCCCAAGCTGTGTAGATaGTCCTGCCACAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KLIGIPFHPSCVDAPATAPKLCR*SCHSFL
Trigger: CAGGAAGCTGTGGCAGGAGCATCTACACAGCTTGGG...AGCTGTGGCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp ATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGCAGCGAAGGTGCCTCTaGTTTGGCAGGAAAAACCAT +
Preference number: 4 (lower is better)
Translates to: IGKHCFLGLSPIQSLSPWQRRCL*FGRKNH
Trigger: ATGGTTTTTCCTGCCAAACCAGAGGCACCTTCGCTG...CCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTCCAGGTGAGGAGAAATaGTGGGCTGAGTCTCATCGG +
Preference number: 4 (lower is better)
Translates to: SHSESEQAYWNPLSPKLCPGEEK*WAESHR
Trigger: CCGATGAGACTCAGCCCACCATTTCTCCTCACCTGG...ACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGTGGCAGGAAAAACCATaGAAGGAGTGGACTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLWQEKP*KEWTFK
Trigger: TTTGAAAGTCCACTCCTTTCATGGTTTTTCCTGCCA...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp AGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCAGTGGCAGGAAAAACCATaGAAGGAGTGGACTTTCAAA +
Preference number: 4 (lower is better)
Translates to: SPIQSLSPWTCACHWSHQWQEKP*KEWTFK
Trigger: TTTGAAAGTCCACTCCTTTCATGGTTTTTCCTGCCA...CTGATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp AAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAAGGCACAAATGTGATTTaGGGAGGCAGTGGCACCTGT +
Preference number: 4 (lower is better)
Translates to: KRGPLAQVTLRERASLLEGTNVI*GGSGTC
Trigger: ACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCC...TTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCGGACCTCGGTCATCTTaGCCTTTGTCAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LVDKRGPLAQVTLRERASGPRSS*PLSIKL
Trigger: CAGCTTTATTGACAAAGGGCAAGATGACCGAGGTCC...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp TCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTTCAAACACGTACCTCTaGTTCCTGACCACGGGACCT +
Preference number: 4 (lower is better)
Translates to: SHSESEQAYWNPLSPKLCSNTYL*FLTTGP
Trigger: AGGTCCCGTGGTCAGGAAGCAGAGGTACGTGTTTGA...ACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp CCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTTCTCTCCCACTCTTaGCCAGTCAGCTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: PKSHSESEQAYWNPLSPKLLSHS*PVSFST
Trigger: AGTTGAGAAGCTGACTGGGCAAGAGTGGGAGAGAAG...CTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTAGCTCCAGGCACAGCTaGGCCGAGTTCTTAAAGTTT +
Preference number: 4 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPSSRHS*AEFLKF
Trigger: AAACTTTAAGAACTCGGCCCAGCTGTGCCTGGAGCT...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp CCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGAGCTCCAGGCACAGCTaGGCCGAGTTCTTAAAGTTT +
Preference number: 4 (lower is better)
Translates to: PKSHSESEQAYWNPLSPKSSRHS*AEFLKF
Trigger: AAACTTTAAGAACTCGGCCCAGCTGTGCCTGGAGCT...CTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTACCAAAGCAAGAAAGTaGGGAGTTTGGGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: AESHRKALFPGTQSHSESTKARK*GVWGVS
Trigger: TGAGACTCCCCAAACTCCTCACTTTCTTGCTTTGGT...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTAGCGAGCAAGCTTATTaGAATCCCCTTTCACCCAAG +
Preference number: 4 (lower is better)
Translates to: AESHRKALFPGTQSHSESSEQAY*NPLSPK
Trigger: CTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGAAAGCACTGTTTCCTaGGACTCAGTCCCATTCAGA +
Preference number: 4 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPESTVS*DSVPFR
Trigger: TCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTC...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp AAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGGGTGAGGAGAAATGGTaGGCTGAGTCTCATCGGAAA +
Preference number: 4 (lower is better)
Translates to: KSHSESEQAYWNPLSPKLGEEKW*AESHRK
Trigger: TTTCCGATGAGACTCAGCCCACCATTTCTCCTCACC...CAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR TCA 90 bp AGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCAAAATAACTCGTTCTTaGAAGGAGAAAGCCGACCGC +
Preference number: 4 (lower is better)
Translates to: SEQAYWNPLSPKLCRCSCKITRS*KEKADR
Trigger: GCGGTCGGCTTTCTCCTTTCAAGAACGAGTTATTTT...GCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374369.8
CDS-3UTR TCA 90 bp AAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGACCAAAGCAAGAAAGTaGGGAGTTTGGGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: KSHSESEQAYWNPLSPKLTKARK*GVWGVS
Trigger: TGAGACTCCCCAAACTCCTCACTTTCTTGCTTTGGT...CAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTACCATGTCCTCATACTaGTTATACACCACGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPTMSSY*LYTTLL
Trigger: CAACAACGTGGTGTATAAGCAGTATGAGGACATGGT...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR GCA 90 bp AAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCACAGCTACCATGTCCTCATACTaGTTATACACCACGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KLIGIPFHPSCVDAPATATMSSY*LYTTLL
Trigger: CAACAACGTGGTGTATAAGCAGTATGAGGACATGGT...AGCTGTGGCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CCA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTTCACAGGACTCTTGTTaGAGATTCAATGAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: AESHRKALFPGTQSHSESSQDSC*RFNEVN
Trigger: ATTTACTTCATTGAATCTCCAACAAGAGTCCTGTGA...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374372.1
CDS CCA 90 bp AAGGCGGCCGGCTGCCGGCCGCTGGGGCAGCTGGACAGCTTCAGCTaGGCAGCCCGCCCGCCTCCGGGGGCCGCTGGCTTGGCCGTGTCC +
Preference number: 5 (lower is better)
Translates to: KAAGCRPLGQLDSFS*AARPPPGAAGLAVS
Trigger: GGACACGGCCAAGCCAGCGGCCCCCGGAGGCGGGCGGGCTGCCCAGCTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGGCCGCCTT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS GCA 90 bp CCGTCCAGGCCTGGCACGGAGCGCACATCCAGCAAGGCGGCCGGCTaGCGGCCGCTGGGGCAGCTGGACAGCTTCAGCTGGGCAGCCCGC +
Preference number: 5 (lower is better)
Translates to: PSRPGTERTSSKAAG*RPLGQLDSFSWAAR
Trigger: GCGGGCTGCCCAGCTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGGCCGCCTTGCTGGATGTGCGCTCCGTGCCAGGCCTGGACGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 90 bp GCTGGACAGCTTCAGCTGGGCAGCCCGCCCGCCTCCGGGGGCCGCTaGCTTGGCCGTGTCCGAGGGCTTCTTCCGCAAGATCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: AGQLQLGSPPASGGR*LGRVRGLLPQDPQL
Trigger: GAGCTGCGGATCTTGCGGAAGAAGCCCTCGGACACGGCCAAGCCAGCGGCCCCCGGAGGCGGGCGGGCTGCCCAGCTGAAGCTGTCCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS GCA 90 bp TTCTTGGTGCGGCCAAACACCAGGAACAGGGCTTTCTCGTGGACCTaGCGGGCGGCGCGGTCGAAGCCCAGGCCACGGAGGTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: FLVRPNTRNRAFSWT*RAARSKPRPRRSTA
Trigger: GGCCGTGGACCTCCGTGGCCTGGGCTTCGACCGCGCCGCCCGGCAGGTCCACGAGAAAGCCCTGTTCCTGGTGTTTGGCCGCACCAAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 90 bp GAGCTTCCAGATGTCGAACACCTCCCAGCCAGATCCGTCCAGGCCTaGCACGGAGCGCACATCCAGCAAGGCGGCCGGCTGCCGGCCGCT +
Preference number: 5 (lower is better)
Translates to: ELPDVEHLPARSVQA*HGAHIQQGGRLPAA
Trigger: AGCGGCCGGCAGCCGGCCGCCTTGCTGGATGTGCGCTCCGTGCCAGGCCTGGACGGATCTGGCTGGGAGGTGTTCGACATCTGGAAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS TCA 90 bp TGCCCTGGCGAGTGGCCAGTGGGGCCCGCCGTTTTCGCCGCTGGCTaGACAGGTACTCATACACGGTCTTATCGTCCTGGCCAGAGCGGG +
Preference number: 5 (lower is better)
Translates to: CPGEWPVGPAVFAAG*TGTHTRSYRPGQSG
Trigger: CCCGCTCTGGCCAGGACGATAAGACCGTGTATGAGTACCTGTTCAGCCAGCGGCGAAAACGGCGGGCCCCACTGGCCACTCGCCAGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 90 bp AGCTGTCCTTTTGGGGTCACAGTCCGGGCTGTAGCCTGCCTTGTTTaGGGAGGGTGTCCTGGCTTGGGTTCAGGGCCGCCCGGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SCPFGVTVRAVACLV*GGCPGLGSGPPGLG
Trigger: CCCCAGACCGGGCGGCCCTGAACCCAAGCCAGGACACCCTCCCCAAACAAGGCAGGCTACAGCCCGGACTGTGACCCCAAAAGGACAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 90 bp TTCCGACTGCAGCGAGCCTTAAGGTTCTTGCTGGGTCGCTTGCCCTaGCGAGTGGCCAGTGGGGCCCGCCGTTTTCGCCGCTGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: FRLQRALRFLLGRLP*RVASGARRFRRWLN
Trigger: GTTCAGCCAGCGGCGAAAACGGCGGGCCCCACTGGCCACTCGCCAGGGCAAGCGACCCAGCAAGAACCTTAAGGCTCGCTGCAGTCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 90 bp CGCTTGCCCTGGCGAGTGGCCAGTGGGGCCCGCCGTTTTCGCCGCTaGCTGAACAGGTACTCATACACGGTCTTATCGTCCTGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: RLPWRVASGARRFRR*LNRYSYTVLSSWPE
Trigger: CTCTGGCCAGGACGATAAGACCGTGTATGAGTACCTGTTCAGCCAGCGGCGAAAACGGCGGGCCCCACTGGCCACTCGCCAGGGCAAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGCCGGGGGCCGCTGGCTaGGCCGTGTCCGAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLPGAAG*AVSEGF
Trigger: GAAGCCCTCGGACACGGCCAAGCCAGCGGCCCCCGG...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp ATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGCCGGGGGCCGCTGGCTaGGCCGTGTCCGAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: IGKHCFLGLSPIQSLSPWPGAAG*AVSEGF
Trigger: GAAGCCCTCGGACACGGCCAAGCCAGCGGCCCCCGG...CCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS GCA 90 bp GACCCCTCTGTGATTCCAGGAGTGCAGGAAGGGGCTCTTGGGATGTaGCACCCAGGAAGACAGAGGGCCAGTGCTGCTACCTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: DPSVIPGVQEGALGM*HPGRQRASAATCSH
Trigger: GTGGCTGCAGGTAGCAGCACTGGCCCTCTGTCTTCCTGGGTGGCACATCCCAAGAGCCCCTTCCTGCACTCCTGGAATCACAGAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 90 bp AGCCTTAAGGTTCTTGCTGGGTCGCTTGCCCTGGCGAGTGGCCAGTaGGGCCCGCCGTTTTCGCCGCTGGCTGAACAGGTACTCATACAC +
Preference number: 5 (lower is better)
Translates to: SLKVLAGSLALASGQ*GPPFSPLAEQVLIH
Trigger: GTGTATGAGTACCTGTTCAGCCAGCGGCGAAAACGGCGGGCCCCACTGGCCACTCGCCAGGGCAAGCGACCCAGCAAGAACCTTAAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CCACAGCTTCCTGACCCCTCTGTGATTCCAGGAGTGCAGGAAGGGGCTCTTGGGTTCTTGCTGGGTCGCTaGCCCTGGCGAGTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: PQLPDPSVIPGVQEGALGFLLGR*PWRVAS
Trigger: ACTGGCCACTCGCCAGGGCAAGCGACCCAGCAAGAA...CCCAAGAGCCCCTTCCTGCACTCCTGGAATCACAGAGGGGTCAGGAAGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGGCGAAACGGCTCCTaGGGCTCTCGTGGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPGRNGS*GSRGGP
Trigger: CGGGCCCCCACGAGAGCCCAAGGAGCCGTTTCGCCC...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp AGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCAGGGACAGATCCTGCTTTaGGGGGTGCCTTGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: SPIQSLSPWTCACHWSHQGQILL*GVPCLR
Trigger: CCGGAGGCAAGGCACCCCCAAAAGCAGGATCTGTCC...CTGATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp TCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTGGGCGAAACGGCTCCTaGGGCTCTCGTGGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: SHSESEQAYWNPLSPKLCGRNGS*GSRGGP
Trigger: CGGGCCCCCACGAGAGCCCAAGGAGCCGTTTCGCCC...ACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CATCAGCAGACGGGCAGCAATCCTCAGCCAGGGGAACTTGTGGATAAAAGGGGGTTCTTGCTGGGTCGCTaGCCCTGGCGAGTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: HQQTGSNPQPGELVDKRGFLLGR*PWRVAS
Trigger: ACTGGCCACTCGCCAGGGCAAGCGACCCAGCAAGAA...CCCCCTTTTATCCACAAGTTCCCCTGGCTGAGGATTGCTGCCCGTCTGCTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGGCTCTCCTTGGCCTCTGCTTaGGCCAATCCTGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: QEVTRHKCDLRRQWHLWLSLASA*ANPGLV
Trigger: GACCAGGCCAGGATTGGCCAAAGCAGAGGCCAAGGA...GAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp AGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCGCCCGGTGCCTCCCTTaGCCCTGGCATTGGCATTGG +
Preference number: 5 (lower is better)
Translates to: SEQAYWNPLSPKLCRCSCARCLP*PWHWHW
Trigger: CCAATGCCAATGCCAGGGCAAAGGGAGGCACCGGGC...GCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp GGTGAGGAGAAATGGTGGGCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCGGGAAGCTGTCCTTTaGGGGTCACAGTCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: GEEKWWAESHRKALFPGTREAVL*GSQSGL
Trigger: CAGCCCGGACTGTGACCCCAAAAGGACAGCTTCCCG...AGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGCCCACCATTTCTCCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp TCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGCCACTGGTCACATCAACAGGTCCCGTTTCTaGGTGCGGCCAAACACCAGG +
Preference number: 5 (lower is better)
Translates to: SVPFRVCLPGPVPATGHINRSRF*VRPNTR
Trigger: CCTGGTGTTTGGCCGCACCAAGAAACGGGACCTGTT...GATGTGACCAGTGGCAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGAACAGGTCCCGTTTCTaGGTGCGGCCAAACACCAGG +
Preference number: 5 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLNRSRF*VRPNTR
Trigger: CCTGGTGTTTGGCCGCACCAAGAAACGGGACCTGTT...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS TCA 90 bp CAAGAAAGTGAGGAGTTTGGGGAGTCTCATCCTCTGGCCAGCCGCTaGATGACACCAAAGAGAACAGCGGCAGCAGCGAAGGTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: QESEEFGESHPLASR*MTPKRTAAAAKVPL
Trigger: CAGAGGCACCTTCGCTGCTGCCGCTGTTCTCTTTGGTGTCATTCAGCGGCTGGCCAGAGGATGAGACTCCCCAAACTCCTCACTTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTCCTTGGCCTCTGCTTaGGCCAATCCTGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: LVDKRGPLAQVTLRERASSLASA*ANPGLV
Trigger: GACCAGGCCAGGATTGGCCAAAGCAGAGGCCAAGGA...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp AAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCACAGCTGCCCGGTGCCTCCCTTaGCCCTGGCATTGGCATTGG +
Preference number: 5 (lower is better)
Translates to: KLIGIPFHPSCVDAPATAARCLP*PWHWHW
Trigger: CCAATGCCAATGCCAGGGCAAAGGGAGGCACCGGGC...AGCTGTGGCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp GCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAACGGGAAGCTGTCCTTTaGGGGTCACAGTCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: AQVTLRERASLLESPFTQREAVL*GSQSGL
Trigger: CAGCCCGGACTGTGACCCCAAAAGGACAGCTTCCCG...TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp AGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCGCTTTTGGGGGTGCCTaGCCTCCGGGAAGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: SEQAYWNPLSPKLCRCSCAFGGA*PPGSCP
Trigger: AGGACAGCTTCCCGGAGGCAAGGCACCCCCAAAAGC...GCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp GCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGGACAGATCCTGCTTTaGGGGGTGCCTTGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: AQVTLRERASLLESPFTQGQILL*GVPCLR
Trigger: CCGGAGGCAAGGCACCCCCAAAAGCAGGATCTGTCC...TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CCACAGCTTCCTGACCCCTCTGTGATTCCAGGAGTGCAGGAAGGGGCTCTTGGGGGGACCTCGGTCATCTaGCCCTTTGTCAATAAAGCT +
Preference number: 5 (lower is better)
Translates to: PQLPDPSVIPGVQEGALGGTSVI*PFVNKA
Trigger: AGCTTTATTGACAAAGGGCAAGATGACCGAGGTCCC...CCCAAGAGCCCCTTCCTGCACTCCTGGAATCACAGAGGGGTCAGGAAGCTGTGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp ATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGCGAGCCTTAAGGTTCTaGCTGGGTCGCTTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: IGKHCFLGLSPIQSLSPWRALRF*LGRLPW
Trigger: CCAGGGCAAGCGACCCAGCAAGAACCTTAAGGCTCG...CCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS TCA 90 bp AAAGTGAGGAGTTTGGGGAGTCTCATCCTCTGGCCAGCCGCTGAATaGCACCAAAGAGAACAGCGGCAGCAGCGAAGGTGCCTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: KVRSLGSLILWPAAE*HQREQRQQRRCLWF
Trigger: AAACCAGAGGCACCTTCGCTGCTGCCGCTGTTCTCTTTGGTGTCATTCAGCGGCTGGCCAGAGGATGAGACTCCCCAAACTCCTCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTGTAGCCTGCCTTGTTaGGGGAGGGTGTCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: LVDKRGPLAQVTLRERASCSLPC*GRVSWL
Trigger: AAGCCAGGACACCCTCCCCAAACAAGGCAGGCTACA...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp AAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAAGCTTTTGGGGGTGCCTaGCCTCCGGGAAGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: KRGPLAQVTLRERASLLEAFGGA*PPGSCP
Trigger: AGGACAGCTTCCCGGAGGCAAGGCACCCCCAAAAGC...TTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTAAGCTGGTGATGGTGTaGGCCAGGCCAGCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPKLVMV*ARPASN
Trigger: GTTGGAGGCTGGCCTGGCCAACACCATCACCAGCTT...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp GCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAACGAGCCTTAAGGTTCTaGCTGGGTCGCTTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: AQVTLRERASLLESPFTQRALRF*LGRLPW
Trigger: CCAGGGCAAGCGACCCAGCAAGAACCTTAAGGCTCG...TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp GCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAATGTAGCCTGCCTTGTTaGGGGAGGGTGTCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: AQVTLRERASLLESPFTQCSLPC*GRVSWL
Trigger: AAGCCAGGACACCCTCCCCAAACAAGGCAGGCTACA...TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp AAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAAAAGCTGGTGATGGTGTaGGCCAGGCCAGCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: KRGPLAQVTLRERASLLEKLVMV*ARPASN
Trigger: GTTGGAGGCTGGCCTGGCCAACACCATCACCAGCTT...TTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGGCTCCCCATGTCCTTGAAGTaGACATGCAGTGCCTTCCGA +
Preference number: 5 (lower is better)
Translates to: QEVTRHKCDLRRQWHLWLPMSLK*TCSAFR
Trigger: TCGGAAGGCACTGCATGTCAACTTCAAGGACATGGG...GAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGCCCATGTCCTTGAAGTaGACATGCAGTGCCTTCCGA +
Preference number: 5 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLPMSLK*TCSAFR
Trigger: TCGGAAGGCACTGCATGTCAACTTCAAGGACATGGG...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGGCTCTCTTCTCTCCCACTCTaGCCCAGTCAGCTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: QEVTRHKCDLRRQWHLWLSSLPL*PSQLLN
Trigger: GTTGAGAAGCTGACTGGGCAAGAGTGGGAGAGAAGA...GAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS GCA 90 bp AGCAGCCCATCCTTCTCCAGGGCACTAATGTCAAACACGTACCTCTaGTTCCTGACCACGGGACCTCGGTCATCTTGCCCTTTGTCAATA +
Preference number: 5 (lower is better)
Translates to: SSPSFSRALMSNTYL*FLTTGPRSSCPLSI
Trigger: TATTGACAAAGGGCAAGATGACCGAGGTCCCGTGGTCAGGAAGCAGAGGTACGTGTTTGACATTAGTGCCCTGGAGAAGGATGGGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGGAGCGAGCAAGCTTATaGGAATCCCCTTTCACCCAA +
Preference number: 5 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLERASL*ESPFTQ
Trigger: TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTC...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 90 bp TTTCGCCGCTGGCTGAACAGGTACTCATACACGGTCTTATCGTCCTaGCCAGAGCGGGCCTTAATCTCATTAAAGAACAGGTCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: FRRWLNRYSYTVLSS*PERALISLKNRSRF
Trigger: GAAACGGGACCTGTTCTTTAATGAGATTAAGGCCCGCTCTGGCCAGGACGATAAGACCGTGTATGAGTACCTGTTCAGCCAGCGGCGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGGAAGGTGCCTCTGGTTaGGCAGGAAAAACCATGAAA +
Preference number: 5 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLEGASG*AGKTMK
Trigger: TTTCATGGTTTTTCCTGCCAAACCAGAGGCACCTTC...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGTGGCTCGAAGGTGCCTCTGGTTaGGCAGGAAAAACCATGAAA +
Preference number: 5 (lower is better)
Translates to: QEVTRHKCDLRRQWHLWLEGASG*AGKTMK
Trigger: TTTCATGGTTTTTCCTGCCAAACCAGAGGCACCTTC...GAGCCACAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp GGTGAGGAGAAATGGTGGGCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTAAGAAAGTGAGGAGTTaGGGGAGTCTCATCCTCTGG +
Preference number: 5 (lower is better)
Translates to: GEEKWWAESHRKALFPGTKKVRS*GSLILW
Trigger: CCAGAGGATGAGACTCCCCAAACTCCTCACTTTCTT...AGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGCCCACCATTTCTCCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CAGGGACAGGAAGTCACCAGGCACAAATGTGATTTGAGGAGGCAGTGGCACCTGCGGTCATCTTGCCCTTaGTCAATAAAGCTGGTGATG +
Preference number: 5 (lower is better)
Translates to: QGQEVTRHKCDLRRQWHLRSSCP*SIKLVM
Trigger: CATCACCAGCTTTATTGACAAAGGGCAAGATGACCG...CAGGTGCCACTGCCTCCTCAAATCACATTTGTGCCTGGTGACTTCCTGTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGACCTGTGCCTGTGCTTATACACCACGTaGTTGGCAGAGTCAATGAAG +
Preference number: 5 (lower is better)
Translates to: LFPGTQSHSESVSLDLCLCLYTT*LAESMK
Trigger: CTTCATTGACTCTGCCAACAACGTGGTGTATAAGCA...CAGGCACAGGTCCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp CTTGTGGATAAAAGGGGGCCTTTAGCCCAAGTCACACTCAGAGAGCGAGCAAGCGAGCGAGCAAGCTTATaGGAATCCCCTTTCACCCAA +
Preference number: 5 (lower is better)
Translates to: LVDKRGPLAQVTLRERASERASL*ESPFTQ
Trigger: TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTC...GCTTGCTCGCTCTCTGAGTGTGACTTGGGCTAAAGGCCCCCTTTTATCCACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp TCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTTCTTCTCTCCCACTCTaGCCCAGTCAGCTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: SSESTVSWDSVPFRVCLPSSLPL*PSQLLN
Trigger: GTTGAGAAGCTGACTGGGCAAGAGTGGGAGAGAAGA...AGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp GCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAAAGAAAGTGAGGAGTTaGGGGAGTCTCATCCTCTGG +
Preference number: 5 (lower is better)
Translates to: AQVTLRERASLLESPFTQKKVRS*GSLILW
Trigger: CCAGAGGATGAGACTCCCCAAACTCCTCACTTTCTT...TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGGGACCTCGGTCATCTaGCCCTTTGTCAATAAAGCT +
Preference number: 5 (lower is better)
Translates to: AESHRKALFPGTQSHSESGTSVI*PFVNKA
Trigger: AGCTTTATTGACAAAGGGCAAGATGACCGAGGTCCC...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp ATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTGTCTCCCTGGGAAAATAACTCGTTCTaGAAAGGAGAAAGCCGACCG +
Preference number: 5 (lower is better)
Translates to: IGKHCFLGLSPIQSLSPWENNSF*KGESRP
Trigger: CGGTCGGCTTTCTCCTTTCAAGAACGAGTTATTTTC...CCAGGGAGACAGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374369.8
CDS-3UTR CAA 90 bp AAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTAGATGCTCCTGCCACAGCTCGGTCATCTTGCCCTTaGTCAATAAAGCTGGTGATG +
Preference number: 5 (lower is better)
Translates to: KLIGIPFHPSCVDAPATARSSCP*SIKLVM
Trigger: CATCACCAGCTTTATTGACAAAGGGCAAGATGACCG...AGCTGTGGCAGGAGCATCTACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp GCTGAGTCTCATCGGAAAGCACTGTTTCCTGGGACTCAGTCCCATTCAGAGTCTTTATACACCACGTTGTaGGCAGAGTCAATGAAGAGG +
Preference number: 5 (lower is better)
Translates to: AESHRKALFPGTQSHSESLYTTL*AESMKR
Trigger: CCTCTTCATTGACTCTGCCAACAACGTGGTGTATAA...AGACTCTGAATGGGACTGAGTCCCAGGAAACAGTGCTTTCCGATGAGACTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp GCCCAAGTCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAATTATACACCACGTTGTaGGCAGAGTCAATGAAGAGG +
Preference number: 5 (lower is better)
Translates to: AQVTLRERASLLESPFTQLYTTL*AESMKR
Trigger: CCTCTTCATTGACTCTGCCAACAACGTGGTGTATAA...TTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGACTTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS-3UTR CAA 90 bp TCACACTCAGAGAGCGAGCAAGCTTATTGGAATCCCCTTTCACCCAAGCTGTGTTGCTTATACACCACGTaGTTGGCAGAGTCAATGAAG +
Preference number: 5 (lower is better)
Translates to: SHSESEQAYWNPLSPKLCCLYTT*LAESMK
Trigger: CTTCATTGACTCTGCCAACAACGTGGTGTATAAGCA...ACACAGCTTGGGTGAAAGGGGATTCCAATAAGCTTGCTCGCTCTCTGAGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS GCA 72 bp CCTGGCACGGAGCGCACATCCAGCAAGGCGGCCGGCTaGCGGCCGCTGGGGCAGCTGGACAGCTTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: PGTERTSSKAAG*RPLGQLDSFSW
Trigger: CCAGCTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGGCCGCCTTGCTGGATGTGCGCTCCGTGCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS GCA 72 bp CGGCCAAACACCAGGAACAGGGCTTTCTCGTGGACCTaGCGGGCGGCGCGGTCGAAGCCCAGGCCACGGAGG +
Preference number: 6 (lower is better)
Translates to: RPNTRNRAFSWT*RAARSKPRPRR
Trigger: CCTCCGTGGCCTGGGCTTCGACCGCGCCGCCCGGCAGGTCCACGAGAAAGCCCTGTTCCTGGTGTTTGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 72 bp GATGTCGAACACCTCCCAGCCAGATCCGTCCAGGCCTaGCACGGAGCGCACATCCAGCAAGGCGGCCGGCTG +
Preference number: 6 (lower is better)
Translates to: DVEHLPARSVQA*HGAHIQQGGRL
Trigger: CAGCCGGCCGCCTTGCTGGATGTGCGCTCCGTGCCAGGCCTGGACGGATCTGGCTGGGAGGTGTTCGACATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 72 bp CAGCGAGCCTTAAGGTTCTTGCTGGGTCGCTTGCCCTaGCGAGTGGCCAGTGGGGCCCGCCGTTTTCGCCGC +
Preference number: 6 (lower is better)
Translates to: QRALRFLLGRLP*RVASGARRFRR
Trigger: GCGGCGAAAACGGCGGGCCCCACTGGCCACTCGCCAGGGCAAGCGACCCAGCAAGAACCTTAAGGCTCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CAA 90 bp AGTGCCTTCCGACTGCAGCGAGCCTTAAGGTTCTTGCTGGGTCGCTaGCCCTGGCGAGTGGCCAGTGGGGCCCGCCGTTTTCGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: SAFRLQRALRFLLGR*PWRVASGARRFRRW
Trigger: CCAGCGGCGAAAACGGCGGGCCCCACTGGCCACTCGCCAGGGCAAGCGACCCAGCAAGAACCTTAAGGCTCGCTGCAGTCGGAAGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 72 bp GTTCTTGCTGGGTCGCTTGCCCTGGCGAGTGGCCAGTaGGGCCCGCCGTTTTCGCCGCTGGCTGAACAGGTA +
Preference number: 6 (lower is better)
Translates to: VLAGSLALASGQ*GPPFSPLAEQV
Trigger: TACCTGTTCAGCCAGCGGCGAAAACGGCGGGCCCCACTGGCCACTCGCCAGGGCAAGCGACCCAGCAAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CAA 72 bp CGACTGCAGCGAGCCTTAAGGTTCTTGCTGGGTCGCTaGCCCTGGCGAGTGGCCAGTGGGGCCCGCCGTTTT +
Preference number: 6 (lower is better)
Translates to: RLQRALRFLLGR*PWRVASGARRF
Trigger: AAAACGGCGGGCCCCACTGGCCACTCGCCAGGGCAAGCGACCCAGCAAGAACCTTAAGGCTCGCTGCAGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 72 bp TTGGCCTCTGCTTTGGCCAATCCTGGCCTGGTCCCCTaGGGTCTCTGGCCCAAGTCAGGGGCACCCAACACA +
Preference number: 6 (lower is better)
Translates to: LASALANPGLVP*GLWPKSGAPNT
Trigger: TGTGTTGGGTGCCCCTGACTTGGGCCAGAGACCCCAGGGGACCAGGCCAGGATTGGCCAAAGCAGAGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 72 bp GAGGGTGTCCTGGCTTGGGTTCAGGGCCGCCCGGTCTaGGGGGCAGCTTTTTGGGTTCATCCTTCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: EGVLAWVQGRPV*GAAFWVHPSWA
Trigger: AGCCCAAGAAGGATGAACCCAAAAAGCTGCCCCCCAGACCGGGCGGCCCTGAACCCAAGCCAGGACACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CAA 72 bp TGCAGTGCCTTCCGACTGCAGCGAGCCTTAAGGTTCTaGCTGGGTCGCTTGCCCTGGCGAGTGGCCAGTGGG +
Preference number: 6 (lower is better)
Translates to: CSAFRLQRALRF*LGRLPWRVASG
Trigger: CCCACTGGCCACTCGCCAGGGCAAGCGACCCAGCAAGAACCTTAAGGCTCGCTGCAGTCGGAAGGCACTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CAA 90 bp AAGTTGACATGCAGTGCCTTCCGACTGCAGCGAGCCTTAAGGTTCTaGCTGGGTCGCTTGCCCTGGCGAGTGGCCAGTGGGGCCCGCCGT +
Preference number: 6 (lower is better)
Translates to: KLTCSAFRLQRALRF*LGRLPWRVASGARR
Trigger: ACGGCGGGCCCCACTGGCCACTCGCCAGGGCAAGCGACCCAGCAAGAACCTTAAGGCTCGCTGCAGTCGGAAGGCACTGCATGTCAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS TCA 72 bp GAGTGGCCAGTGGGGCCCGCCGTTTTCGCCGCTGGCTaGACAGGTACTCATACACGGTCTTATCGTCCTGGC +
Preference number: 6 (lower is better)
Translates to: EWPVGPAVFAAG*TGTHTRSYRPG
Trigger: GCCAGGACGATAAGACCGTGTATGAGTACCTGTTCAGCCAGCGGCGAAAACGGCGGGCCCCACTGGCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 72 bp TGGCGAGTGGCCAGTGGGGCCCGCCGTTTTCGCCGCTaGCTGAACAGGTACTCATACACGGTCTTATCGTCC +
Preference number: 6 (lower is better)
Translates to: WRVASGARRFRR*LNRYSYTVLSS
Trigger: GGACGATAAGACCGTGTATGAGTACCTGTTCAGCCAGCGGCGAAAACGGCGGGCCCCACTGGCCACTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS GCA 72 bp GTGATTCCAGGAGTGCAGGAAGGGGCTCTTGGGATGTaGCACCCAGGAAGACAGAGGGCCAGTGCTGCTACC +
Preference number: 6 (lower is better)
Translates to: VIPGVQEGALGM*HPGRQRASAAT
Trigger: GGTAGCAGCACTGGCCCTCTGTCTTCCTGGGTGGCACATCCCAAGAGCCCCTTCCTGCACTCCTGGAATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS TCA 72 bp AGTTTGGGGAGTCTCATCCTCTGGCCAGCCGCTGAATaGCACCAAAGAGAACAGCGGCAGCAGCGAAGGTGC +
Preference number: 6 (lower is better)
Translates to: SLGSLILWPAAE*HQREQRQQRRC
Trigger: GCACCTTCGCTGCTGCCGCTGTTCTCTTTGGTGTCATTCAGCGGCTGGCCAGAGGATGAGACTCCCCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS TCA 72 bp GAGGAGTTTGGGGAGTCTCATCCTCTGGCCAGCCGCTaGATGACACCAAAGAGAACAGCGGCAGCAGCGAAG +
Preference number: 6 (lower is better)
Translates to: EEFGESHPLASR*MTPKRTAAAAK
Trigger: CTTCGCTGCTGCCGCTGTTCTCTTTGGTGTCATTCAGCGGCTGGCCAGAGGATGAGACTCCCCAAACTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CAA 90 bp GGACCTCGGTCATCTTGCCCTTTGTCAATAAAGCTGGTGATGGTGTaGGCCAGGCCAGCCTCCAACTTCACGCTGCTGTTGCCTCCCTTT +
Preference number: 6 (lower is better)
Translates to: GPRSSCPLSIKLVMV*ARPASNFTLLLPPF
Trigger: AAAGGGAGGCAACAGCAGCGTGAAGTTGGAGGCTGGCCTGGCCAACACCATCACCAGCTTTATTGACAAAGGGCAAGATGACCGAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CAA 90 bp TGGCCAGAGCGGGCCTTAATCTCATTAAAGAACAGGTCCCGTTTCTaGGTGCGGCCAAACACCAGGAACAGGGCTTTCTCGTGGACCTGC +
Preference number: 6 (lower is better)
Translates to: WPERALISLKNRSRF*VRPNTRNRAFSWTC
Trigger: GCAGGTCCACGAGAAAGCCCTGTTCCTGGTGTTTGGCCGCACCAAGAAACGGGACCTGTTCTTTAATGAGATTAAGGCCCGCTCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS GCA 72 bp TCCTTCTCCAGGGCACTAATGTCAAACACGTACCTCTaGTTCCTGACCACGGGACCTCGGTCATCTTGCCCT +
Preference number: 6 (lower is better)
Translates to: SFSRALMSNTYL*FLTTGPRSSCP
Trigger: AGGGCAAGATGACCGAGGTCCCGTGGTCAGGAAGCAGAGGTACGTGTTTGACATTAGTGCCCTGGAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CAA 72 bp CACCGTCTCCAGTCAGCAGCTGAAAATAACTCGTTCTaGAAAGGAGAAAGCCGACCGCCCCCTTTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: HRLQSAAENNSF*KGESRPPPFSC
Trigger: GCAGGAGAAAGGGGGCGGTCGGCTTTCTCCTTTCAAGAACGAGTTATTTTCAGCTGCTGACTGGAGACGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374369.8
CDS CCA 72 bp CACCAAAGAGAACAGCGGCAGCAGCGAAGGTGCCTCTaGTTTGGCAGGAAAAACCATGAAAGGAGTGGACTT +
Preference number: 6 (lower is better)
Translates to: HQREQRQQRRCL*FGRKNHERSGL
Trigger: AAGTCCACTCCTTTCATGGTTTTTCCTGCCAAACCAGAGGCACCTTCGCTGCTGCCGCTGTTCTCTTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CAA 72 bp TCATCTTGCCCTTTGTCAATAAAGCTGGTGATGGTGTaGGCCAGGCCAGCCTCCAACTTCACGCTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: SSCPLSIKLVMV*ARPASNFTLLL
Trigger: CAACAGCAGCGTGAAGTTGGAGGCTGGCCTGGCCAACACCATCACCAGCTTTATTGACAAAGGGCAAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CAA 72 bp CGGGCCTTAATCTCATTAAAGAACAGGTCCCGTTTCTaGGTGCGGCCAAACACCAGGAACAGGGCTTTCTCG +
Preference number: 6 (lower is better)
Translates to: RALISLKNRSRF*VRPNTRNRAFS
Trigger: CGAGAAAGCCCTGTTCCTGGTGTTTGGCCGCACCAAGAAACGGGACCTGTTCTTTAATGAGATTAAGGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CAA 90 bp AATGACACCAAAGAGAACAGCGGCAGCAGCGAAGGTGCCTCTGGTTaGGCAGGAAAAACCATGAAAGGAGTGGACTTTCAAAAGCAGCGG +
Preference number: 6 (lower is better)
Translates to: NDTKENSGSSEGASG*AGKTMKGVDFQKQR
Trigger: CCGCTGCTTTTGAAAGTCCACTCCTTTCATGGTTTTTCCTGCCAAACCAGAGGCACCTTCGCTGCTGCCGCTGTTCTCTTTGGTGTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS TCA 72 bp GTGAAACCCTGTCTCTACTGTAAGTGTTATGCTGCCTaGAGCTTCTCGGAGCGTCTGAGCAGCAAGGTGAAC +
Preference number: 6 (lower is better)
Translates to: VKPCLYCKCYAA*SFSERLSSKVN
Trigger: GTTCACCTTGCTGCTCAGACGCTCCGAGAAGCTTCAGGCAGCATAACACTTACAGTAGAGACAGGGTTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374372.1
CDS CAA 90 bp AGCAGTAGCAGCAGAAGGAAAGGCTTTCTCCTCAGTCTGAGACTCTaGAAGTCTGCCGGGTGTGTGTTTGTATCCAGTCCCATAGTGGAA +
Preference number: 6 (lower is better)
Translates to: SSSSRRKGFLLSLRL*KSAGCVFVSSPIVE
Trigger: TTCCACTATGGGACTGGATACAAACACACACCCGGCAGACTTCAAGAGTCTCAGACTGAGGAGAAAGCCTTTCCTTCTGCTGCTACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS GCA 72 bp GAAAGGCTTTCTCCTCAGTCTGAGACTCTTGAAGTCTaGCGGGTGTGTGTTTGTATCCAGTCCCATAGTGGA +
Preference number: 6 (lower is better)
Translates to: ERLSPQSETLEV*RVCVCIQSHSG
Trigger: TCCACTATGGGACTGGATACAAACACACACCCGGCAGACTTCAAGAGTCTCAGACTGAGGAGAAAGCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CCA 72 bp TGGCTGAACAGGTACTCATACACGGTCTTATCGTCCTaGCCAGAGCGGGCCTTAATCTCATTAAAGAACAGG +
Preference number: 6 (lower is better)
Translates to: WLNRYSYTVLSS*PERALISLKNR
Trigger: CCTGTTCTTTAATGAGATTAAGGCCCGCTCTGGCCAGGACGATAAGACCGTGTATGAGTACCTGTTCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1
CDS CAA 72 bp AAAGAGAACAGCGGCAGCAGCGAAGGTGCCTCTGGTTaGGCAGGAAAAACCATGAAAGGAGTGGACTTTCAA +
Preference number: 6 (lower is better)
Translates to: KENSGSSEGASG*AGKTMKGVDFQ
Trigger: TTGAAAGTCCACTCCTTTCATGGTTTTTCCTGCCAAACCAGAGGCACCTTCGCTGCTGCCGCTGTTCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374369.8
ENST00000374372.1