Pregenerated sensors for GDF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000184344

Ensembl transcript IDs: ENST00000329913.4

Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CCACACATGAGGCTCCTGAACCAGGAACAGAGCCAGTTCCAGCTCTaGTCCCAGGTTATAGTAAGAATTGGGCCCCAAGTCCAGGCCCAG	+
Preference number: 5 (lower is better) Translates to: PHMRLLNQEQSQFQL*SQVIVRIGPQVQAQ Trigger: CTGGGCCTGGACTTGGGGCCCAATTCTTACTATAACCTGGGACCAGAGCTGGAACTGGCTCTGTTCCTGGTTCAGGAGCCTCATGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS TCA 90 bp	GGATGGCTGCTCTCCTTTTCCGAGAAGGGTGGCACTGATCAGGGTTaGGAGTCACCACCAGCAGGGAAGCATGAAGGGAGCATCTTAGTC	+
Preference number: 5 (lower is better) Translates to: GWLLSFSEKGGTDQG*ESPPAGKHEGSILV Trigger: GACTAAGATGCTCCCTTCATGCTTCCCTGCTGGTGGTGACTCTCAACCCTGATCAGTGCCACCCTTCTCGGAAAAGGAGAGCAGCCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS GCA 90 bp	ACGGTGGCAGAGGTTCTTACAAGAAAGCTTGGGGACAGGGATGGCTaGTCTCCTTTTCCGAGAAGGGTGGCACTGATCAGGGTTGAGAGT	+
Preference number: 5 (lower is better) Translates to: TVAEVLTRKLGDRDG*SPFPRRVALIRVES Trigger: ACTCTCAACCCTGATCAGTGCCACCCTTCTCGGAAAAGGAGAGCAGCCATCCCTGTCCCCAAGCTTTCTTGTAAGAACCTCTGCCACCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS TCA 90 bp	TACATCCAGCAGGTTGAAGTGAACAGCACCTTGTGGCCATGGGACTaGCCGCAACACAAACATTTTACCTGGCTTAGGGGTGGTCTGGCC	+
Preference number: 5 (lower is better) Translates to: YIQQVEVNSTLWPWD*PQHKHFTWLRGGLA Trigger: GGCCAGACCACCCCTAAGCCAGGTAAAATGTTTGTGTTGCGGTCAGTCCCATGGCCACAAGGTGCTGTTCACTTCAACCTGCTGGATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS CCA 90 bp	AATGGGAGACAGCTTGGTGGGGATACACACAGCCTGGGGGATCTCTaGGTCAACGGCATGCATCAGGGCTTGCATGAAAGCATAATTGGA	+
Preference number: 5 (lower is better) Translates to: NGRQLGGDTHSLGDL*VNGMHQGLHESIIG Trigger: TCCAATTATGCTTTCATGCAAGCCCTGATGCATGCCGTTGACCCAGAGATCCCCCAGGCTGTGTGTATCCCCACCAAGCTGTCTCCCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS TCA 90 bp	ATCCACTTGTGCCAACCCAGGTCCCGGAAGTTAATGAATAGCTGGTaGCGGTGGCAGAGGTTCTTACAAGAAAGCTTGGGGACAGGGATG	+
Preference number: 5 (lower is better) Translates to: IHLCQPRSRKLMNSW*RWQRFLQESLGTGM Trigger: CATCCCTGTCCCCAAGCTTTCTTGTAAGAACCTCTGCCACCGTCACCAGCTATTCATTAACTTCCGGGACCTGGGTTGGCACAAGTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS TCA 90 bp	CGGGGGTTGTCATTCCAATCCTTAGCTACATCCAGCAGGTTGAAGTaGACAGCACCTTGTGGCCATGGGACTGACCGCAACACAAACATT	+
Preference number: 5 (lower is better) Translates to: RGLSFQSLATSSRLK*TAPCGHGTDRNTNI Trigger: AATGTTTGTGTTGCGGTCAGTCCCATGGCCACAAGGTGCTGTTCACTTCAACCTGCTGGATGTAGCTAAGGATTGGAATGACAACCCCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS TCA 90 bp	CTTGAAATTGGACTGCCTGGCCCAAAGCCAGAATTAACAGGAAGCTaGAAGCCAAATCTGGCAAGAAACGAAGCATGGCCTCTGGAGTGG	+
Preference number: 5 (lower is better) Translates to: LEIGLPGPKPELTGS*KPNLARNEAWPLEW Trigger: CCACTCCAGAGGCCATGCTTCGTTTCTTGCCAGATTTGGCTTTCAGCTTCCTGTTAATTCTGGCTTTGGGCCAGGCAGTCCAATTTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS TCA 90 bp	GAAGGCGCCTTATCTAAGCCCAGAAATTGGAGAAAGACATATTCTTaGAATTGGACTGCCTGGCCCAAAGCCAGAATTAACAGGAAGCTG	+
Preference number: 5 (lower is better) Translates to: EGALSKPRNWRKTYS*NWTAWPKARINRKL Trigger: CAGCTTCCTGTTAATTCTGGCTTTGGGCCAGGCAGTCCAATTTCAAGAATATGTCTTTCTCCAATTTCTGGGCTTAGATAAGGCGCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS TCA 90 bp	CACACCCACATTCATCGACTACCATGTCTTCATAATGTCGTAGAATaGCATTGTCATTATTGTCCTGGTAGAGCATGGAAATGGGAGACA	+
Preference number: 5 (lower is better) Translates to: HTHIHRLPCLHNVVE*HCHYCPGRAWKWET Trigger: TGTCTCCCATTTCCATGCTCTACCAGGACAATAATGACAATGTCATTCTACGACATTATGAAGACATGGTAGTCGATGAATGTGGGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS CCA 72 bp	CCAAATCTGGCAAGAAACGAAGCATGGCCTCTGGAGTaGCTGTCAGACCGGGGAGAGCTCCACTGCCAGACT	+
Preference number: 6 (lower is better) Translates to: PNLARNEAWPLE*LSDRGELHCQT Trigger: AGTCTGGCAGTGGAGCTCTCCCCGGTCTGACAGCCACTCCAGAGGCCATGCTTCGTTTCTTGCCAGATTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS CCA 72 bp	GAAAGCCAAATCTGGCAAGAAACGAAGCATGGCCTCTaGAGTGGCTGTCAGACCGGGGAGAGCTCCACTGCC	+
Preference number: 6 (lower is better) Translates to: ESQIWQETKHGL*SGCQTGESSTA Trigger: GGCAGTGGAGCTCTCCCCGGTCTGACAGCCACTCCAGAGGCCATGCTTCGTTTCTTGCCAGATTTGGCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS CCA 72 bp	CAGCTTGGTGGGGATACACACAGCCTGGGGGATCTCTaGGTCAACGGCATGCATCAGGGCTTGCATGAAAGC	+
Preference number: 6 (lower is better) Translates to: QLGGDTHSLGDL*VNGMHQGLHES Trigger: GCTTTCATGCAAGCCCTGATGCATGCCGTTGACCCAGAGATCCCCCAGGCTGTGTGTATCCCCACCAAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS CCA 72 bp	GAAATGGGAGACAGCTTGGTGGGGATACACACAGCCTaGGGGATCTCTGGGTCAACGGCATGCATCAGGGCT	+
Preference number: 6 (lower is better) Translates to: EMGDSLVGIHTA*GISGSTACIRA Trigger: AGCCCTGATGCATGCCGTTGACCCAGAGATCCCCCAGGCTGTGTGTATCCCCACCAAGCTGTCTCCCATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS CCA 72 bp	AGGCTCCTGAACCAGGAACAGAGCCAGTTCCAGCTCTaGTCCCAGGTTATAGTAAGAATTGGGCCCCAAGTC	+
Preference number: 6 (lower is better) Translates to: RLLNQEQSQFQL*SQVIVRIGPQV Trigger: GACTTGGGGCCCAATTCTTACTATAACCTGGGACCAGAGCTGGAACTGGCTCTGTTCCTGGTTCAGGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS TCA 72 bp	TGCCAACCCAGGTCCCGGAAGTTAATGAATAGCTGGTaGCGGTGGCAGAGGTTCTTACAAGAAAGCTTGGGG	+
Preference number: 6 (lower is better) Translates to: CQPRSRKLMNSW*RWQRFLQESLG Trigger: CCCCAAGCTTTCTTGTAAGAACCTCTGCCACCGTCACCAGCTATTCATTAACTTCCGGGACCTGGGTTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS TCA 72 bp	CAGGTTGAAGTGAACAGCACCTTGTGGCCATGGGACTaGCCGCAACACAAACATTTTACCTGGCTTAGGGGT	+
Preference number: 6 (lower is better) Translates to: QVEVNSTLWPWD*PQHKHFTWLRG Trigger: ACCCCTAAGCCAGGTAAAATGTTTGTGTTGCGGTCAGTCCCATGGCCACAAGGTGCTGTTCACTTCAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS TCA 72 bp	TCATTCCAATCCTTAGCTACATCCAGCAGGTTGAAGTaGACAGCACCTTGTGGCCATGGGACTGACCGCAAC	+
Preference number: 6 (lower is better) Translates to: SFQSLATSSRLK*TAPCGHGTDRN Trigger: GTTGCGGTCAGTCCCATGGCCACAAGGTGCTGTTCACTTCAACCTGCTGGATGTAGCTAAGGATTGGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS CAA 72 bp	CTGGGGGATCTCTGGGTCAACGGCATGCATCAGGGCTaGCATGAAAGCATAATTGGAGCTGTTGAGAGAGAT	+
Preference number: 6 (lower is better) Translates to: LGDLWVNGMHQG*HESIIGAVERD Trigger: ATCTCTCTCAACAGCTCCAATTATGCTTTCATGCAAGCCCTGATGCATGCCGTTGACCCAGAGATCCCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS CAA 72 bp	AGTATCTCCAGGAATAACCCGAAATTTTTCCGGGGGTaGTCATTCCAATCCTTAGCTACATCCAGCAGGTTG	+
Preference number: 6 (lower is better) Translates to: SISRNNPKFFRG*SFQSLATSSRL Trigger: CAACCTGCTGGATGTAGCTAAGGATTGGAATGACAACCCCCGGAAAAATTTCGGGTTATTCCTGGAGATACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329913.4
CDS TCA 72 bp	ATTCATCGACTACCATGTCTTCATAATGTCGTAGAATaGCATTGTCATTATTGTCCTGGTAGAGCATGGAAA	+
Preference number: 6 (lower is better) Translates to: IHRLPCLHNVVE*HCHYCPGRAWK Trigger: TTTCCATGCTCTACCAGGACAATAATGACAATGTCATTCTACGACATTATGAAGACATGGTAGTCGATGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329913.4

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