RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GDAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000196505

Ensembl transcript IDs: ENST00000369442.3, ENST00000369443.10, ENST00000464026.1, ENST00000491626.5, ENST00000493555.5, ENST00000494224.1

Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGCAAGAAGCCAGAAGAGGGCCCTCATCAGGAATTGCGCTGGATaGCACTTTGATCTTGGGGTTTCTCAGCCTCCAACTGTGAGAAAT +
Preference number: 1 (lower is better)
Translates to: TARSQKRALIRNCAG*HFDLGVSQPPTVRN
Trigger: ATTTCTCACAGTTGGAGGCTGAGAAACCCCAAGATCAAAGTGCCATCCAGCGCAATTCCTGATGAGGGCCCTCTTCTGGCTTCTTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR GCA 90 bp GCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTaGCAAGTGAGAATACAGCAAGAAGCCAGAAGAGGGCCCTCATCA +
Preference number: 1 (lower is better)
Translates to: ALIRRDRKVTMSLSL*QVRIQQEARRGPSS
Trigger: TGATGAGGGCCCTCTTCTGGCTTCTTGCTGTATTCTCACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 90 bp TATCAGCTCCCTGGATTTGTTCACTGTGACACACTTCCTCCACACTaGTGCAGGCAACTCAAGAGATGCTGCTATGAAATGTCCTTAGAG +
Preference number: 1 (lower is better)
Translates to: YQLPGFVHCDTLPPH*CRQLKRCCYEMSLE
Trigger: CTCTAAGGACATTTCATAGCAGCATCTCTTGAGTTGCCTGCATCAGTGTGGAGGAAGTGTGTCACAGTGAACAAATCCAGGGAGCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 90 bp GCGCTGGATGGCACTTTGATCTTGGGGTTTCTCAGCCTCCAACTGTaGGAAATAAATGTGTTTTGTTACGCCACCCAGTTTACGGTATTC +
Preference number: 1 (lower is better)
Translates to: ALDGTLILGFLSLQL*EINVFCYATQFTVF
Trigger: GAATACCGTAAACTGGGTGGCGTAACAAAACACATTTATTTCTCACAGTTGGAGGCTGAGAAACCCCAAGATCAAAGTGCCATCCAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 90 bp GAACTGAATGCTTATGTTCTCCTCCTCGTCTGCAAATTCATATGTTaGAGCCCTAACATACAAAGTGATGGCATTTGGAGGTGGGGCCTC +
Preference number: 1 (lower is better)
Translates to: ELNAYVLLLVCKFIC*SPNIQSDGIWRWGL
Trigger: GAGGCCCCACCTCCAAATGCCATCACTTTGTATGTTAGGGCTTCAACATATGAATTTGCAGACGAGGAGGAGAACATAAGCATTCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CCA 90 bp ATCTGTACAGCAACAATGAATATCACTTCAACAGGTAGCTATTCGTaGAGGAAGTGGCATCCTGGGAACCAAGAAGCACTGAAAGATGGC +
Preference number: 1 (lower is better)
Translates to: ICTATMNITSTGSYS*RKWHPGNQEALKDG
Trigger: GCCATCTTTCAGTGCTTCTTGGTTCCCAGGATGCCACTTCCTCCACGAATAGCTACCTGTTGAAGTGATATTCATTGTTGCTGTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 90 bp ATTATTCAGTTTGAGAAAACTGGTCTACACGGTCGGTCCTGCTTGTaGATGTCGTCTTCAGGAGGTAACTTCTATTATCACCAACCTCAC +
Preference number: 1 (lower is better)
Translates to: IIQFEKTGLHGRSCL*MSSSGGNFYYHQPH
Trigger: GTGAGGTTGGTGATAATAGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAGTTTTCTCAAACTGAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 90 bp GGAAAAAGGCTGAAGATACAGTCTTCTTGTTTCACCCCACACTGTTaGGATCGGAACTGTGGCAATCTTAACAAGTCATATAATCCAAGG +
Preference number: 1 (lower is better)
Translates to: GKRLKIQSSCFTPHC*DRNCGNLNKSYNPR
Trigger: CCTTGGATTATATGACTTGTTAAGATTGCCACAGTTCCGATCTCAACAGTGTGGGGTGAAACAAGAAGACTGTATCTTCAGCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CCA 90 bp CTGGAAGCTAAATGCAGTCTATACTCTTTTACTCTAACTATGGTCTaGGGACCAGGAGAATTGATAACACCTAAGAGCTTGTTAGAAACT +
Preference number: 1 (lower is better)
Translates to: LEAKCSLYSFTLTMV*GPGELITPKSLLET
Trigger: AGTTTCTAACAAGCTCTTAGGTGTTATCAATTCTCCTGGTCCCCAGACCATAGTTAGAGTAAAAGAGTATAGACTGCATTTAGCTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 90 bp CCCTTTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTaGAGAAGATACCTCAAATATGATCTCACGATTGACTGTAGAAGA +
Preference number: 1 (lower is better)
Translates to: PFNKEKLADFHSCSL*RRYLKYDLTIDCRR
Trigger: TCTTCTACAGTCAATCGTGAGATCATATTTGAGGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CCA 90 bp AACACCATGGATCTGAAGCAAACAATGCATCTGGTTAGCATACATTaGTTCTGTATATTTCGAGAATCACTTAAGTACACAAAGGAAGCG +
Preference number: 1 (lower is better)
Translates to: NTMDLKQTMHLVSIH*FCIFRESLKYTKEA
Trigger: CGCTTCCTTTGTGTACTTAAGTGATTCTCGAAATATACAGAACCAATGTATGCTAACCAGATGCATTGTTTGCTTCAGATCCATGGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CCA 90 bp CAGATTATGCATATATGTGTGTGTGCATGCATGTATATGTATATATaGTTAGGCCTACCAGGCAATCCTTATCATCTCTGGGTTTATGAT +
Preference number: 1 (lower is better)
Translates to: QIMHICVCACMYMYI*LGLPGNPYHLWVYD
Trigger: ATCATAAACCCAGAGATGATAAGGATTGCCTGGTAGGCCTAACCATATATACATATACATGCATGCACACACACATATATGCATAATCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 90 bp CTTGATACCATCTGTTTAAGGACTAGTTCAGTAAGACTCAAAGATTaGACTAGGTTATTTATTGCTCTATGTTCTCTACATATGGACCAC +
Preference number: 1 (lower is better)
Translates to: LDTICLRTSSVRLKD*TRLFIALCSLHMDH
Trigger: GTGGTCCATATGTAGAGAACATAGAGCAATAAATAACCTAGTTCAATCTTTGAGTCTTACTGAACTAGTCCTTAAACAGATGGTATCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CCA 90 bp TCAATTAGCATTTGGCATGACCAAAGTTTAATTAAATTAAAGACTTaGTGGTGCTTTGAATTAACATCAGATGCTGGTGGTCATCTCCAT +
Preference number: 1 (lower is better)
Translates to: SISIWHDQSLIKLKT*WCFELTSDAGGHLH
Trigger: ATGGAGATGACCACCAGCATCTGATGTTAATTCAAAGCACCACCAAGTCTTTAATTTAATTAAACTTTGGTCATGCCAAATGCTAATTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CCA 90 bp TCAAAGATTGAACTAGGTTATTTATTGCTCTATGTTCTCTACATATaGACCACAGAAGTCCGACTCAAAGAATGTAAAACAAGGCAGATT +
Preference number: 1 (lower is better)
Translates to: SKIELGYLLLYVLYI*TTEVRLKECKTRQI
Trigger: AATCTGCCTTGTTTTACATTCTTTGAGTCGGACTTCTGTGGTCCATATGTAGAGAACATAGAGCAATAAATAACCTAGTTCAATCTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTCAAAGTGATGGCATTTaGAGGTGGGGCCTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: LVYTVGPACECRLQEVTSQSDGI*RWGLWV
Trigger: CACCCAGAGGCCCCACCTCCAAATGCCATCACTTTG...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTACAGGTAGCTATTCGTaGAGGAAGTGGCATCCTGGG +
Preference number: 2 (lower is better)
Translates to: LVYTVGPACECRLQEVTSTGSYS*RKWHPG
Trigger: CCCAGGATGCCACTTCCTCCACGAATAGCTACCTGT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTGAGGAAGTGGCATCCTaGGAACCAAGAAGCACTGAA +
Preference number: 2 (lower is better)
Translates to: LVYTVGPACECRLQEVTSEEVAS*EPRSTE
Trigger: TTCAGTGCTTCTTGGTTCCCAGGATGCCACTTCCTC...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTAAAATACCAGAGAGGTaGGGACAAAAGGCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: LVYTVGPACECRLQEVTSKIPER*GQKALW
Trigger: CCAGAGAGCCTTTTGTCCCCACCTCTCTGGTATTTT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTAGGAATTGCGCTGGATaGCACTTTGATCTTGGGGTT +
Preference number: 2 (lower is better)
Translates to: LVYTVGPACECRLQEVTSRNCAG*HFDLGV
Trigger: AACCCCAAGATCAAAGTGCCATCCAGCGCAATTCCT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR GCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTTCTCTAAATGCTCACTaGTGGAGTCTTGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: LVYTVGPACECRLQEVTSSLNAH*WSLGRC
Trigger: GCATCTTCCAAGACTCCAGCAGTGAGCATTTAGAGA...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTTATGTGCGGTCCTTTTaGATAAGACCAAATCATCCA +
Preference number: 2 (lower is better)
Translates to: LVYTVGPACECRLQEVTSYVRSF*IRPNHP
Trigger: TGGATGATTTGGTCTTATTCAAAAGGACCGCACATA...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR GCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTAGGCAACTCAAGAGATaGTGCTATGAAATGTCCTTA +
Preference number: 2 (lower is better)
Translates to: LVYTVGPACECRLQEVTSRQLKR*CYEMSL
Trigger: TAAGGACATTTCATAGCAGCATCTCTTGAGTTGCCT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAACATCCGACATCTGACTaGCTGCCTGGATGTGATGAC +
Preference number: 2 (lower is better)
Translates to: SLLETDNPRGHPRTIESEHPTSD*LPGCDD
Trigger: GTCATCACATCCAGGCAGCCAGTCAGATGTCGGATG...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CAA 90 bp CTGAGTGTGTCAGAAGCCAAAGCGCCAATGCTACTGACCACTAAATaGTTGCTTCTTAAACTGGGGTCCATGCAAAATCCTTGTGGAGTA +
Preference number: 2 (lower is better)
Translates to: LSVSEAKAPMLLTTK*LLLKLGSMQNPCGV
Trigger: TACTCCACAAGGATTTTGCATGGACCCCAGTTTAAGAAGCAACAATTTAGTGGTCAGTAGCATTGGCGCTTTGGCTTCTGACACACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTCATTTAAAAACTAACTaGAGATACCCCACCACAACA +
Preference number: 2 (lower is better)
Translates to: LVYTVGPACECRLQEVTSHLKTN*RYPTTT
Trigger: TGTTGTGGTGGGGTATCTTCAGTTAGTTTTTAAATG...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAATATAGCATCAGGGGATaGGCAGGCCAGAAGAGATTC +
Preference number: 2 (lower is better)
Translates to: SLLETDNPRGHPRTIESEYSIRG*AGQKRF
Trigger: GAATCTCTTCTGGCCTGCTCATCCCCTGATGCTATA...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTTTCTTTGATCTCCAATaGAGAATTAGTTTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LVYTVGPACECRLQEVTSFFDLQ*RISLGR
Trigger: TCTGCCCAAACTAATTCTTCATTGGAGATCAAAGAA...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAATGTAATCTGGCACTTTaGGAAGCCAAGGTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: SLLETDNPRGHPRTIESECNLAL*EAKVGR
Trigger: TCTGCCCACCTTGGCTTCTCAAAGTGCCAGATTACA...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR GCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTCAAGGACAAGAGGAGTaGTGTGTAGCATTCCCTCAT +
Preference number: 2 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSQGQEE*CVAFPH
Trigger: ATGAGGGAATGCTACACAGCACTCCTCTTGTCCTTG...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTATGTACGTGATGGGGTaGGGAAGATGGGGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIMYVMG*GRWGCG
Trigger: CCCACAGCCCCATCTTCCTCACCCCATCACGTACAT...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR GCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAACCGAGATCACACCATTaGACTCCAGCTTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEPRSHH*TPAWVT
Trigger: TGTCACCCAAGCTGGAGTGCAATGGTGTGATCTCGG...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CAA 90 bp CCAAATATTGGCAGAACCATCTCAGTGCTTAGGTTTGTATTTGTATaGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: PNIGRTISVLRFVFV*TSLLRPSSTLVVEG
Trigger: GCCTTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAACCTAAGCACTGAGATGGTTCTGCCAATATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CAA 90 bp AGTGTGTCAGAAGCCAAAGCGCCAATGCTACTGACCACTAAATTGTaGCTTCTTAAACTGGGGTCCATGCAAAATCCTTGTGGAGTATAT +
Preference number: 2 (lower is better)
Translates to: SVSEAKAPMLLTTKL*LLKLGSMQNPCGVY
Trigger: ATATACTCCACAAGGATTTTGCATGGACCCCAGTTTAAGAAGCAACAATTTAGTGGTCAGTAGCATTGGCGCTTTGGCTTCTGACACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCATTCACCCCACACTGTTaGGATCGGAACTGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSFTPHC*DRNCGN
Trigger: ATTGCCACAGTTCCGATCTCAACAGTGTGGGGTGAA...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAACACTTCCTCCACACTaGTGCAGGCAACTCAAGAGA +
Preference number: 2 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVETLPPH*CRQLKR
Trigger: TCTCTTGAGTTGCCTGCATCAGTGTGGAGGAAGTGT...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAAAACATCAGATGCTGGTaGTCATCTCCATCCAGTATC +
Preference number: 2 (lower is better)
Translates to: SLLETDNPRGHPRTIESENIRCW*SSPSSI
Trigger: GATACTGGATGGAGATGACCACCAGCATCTGATGTT...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTCATAGCTGCTCCTTGTaGAGAAGATACCTCAAATAT +
Preference number: 2 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSHSCSL*RRYLKY
Trigger: ATATTTGAGGTATCTTCTTCACAAGGAGCAGCTATG...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTTTTGGGCCAGGTTCTTaGGGTAGCCAAGTTCCCCTT +
Preference number: 2 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIFGPGS*GSQVPL
Trigger: AAGGGGAACTTGGCTACCTCAAGAACCTGGCCCAAA...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTCTCAGCCTCCAACTGTaGGAAATAAATGTGTTTTGT +
Preference number: 2 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSLSLQL*EINVFC
Trigger: ACAAAACACATTTATTTCTCACAGTTGGAGGCTGAG...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAACTATGCTTTTCTTCCTaGACTCAGTGGTCCTATACA +
Preference number: 2 (lower is better)
Translates to: SLLETDNPRGHPRTIESELCFSS*TQWSYT
Trigger: TGTATAGGACCACTGAGTTCAGGAAGAAAAGCATAG...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTGTGTGCAGTTCAGAATaGCCTACCATTTTTAGATTG +
Preference number: 2 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSVCSSE*PTIFRL
Trigger: CAATCTAAAAATGGTAGGCCATTCTGAACTGCACAC...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTTCTGTACAGCAACAATaGATATCACTTCAACAGGTA +
Preference number: 2 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSSVQQQ*ISLQQV
Trigger: TACCTGTTGAAGTGATATTCATTGTTGCTGTACAGA...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAGGACAAAAGGCTCTCTaGATCTGTACAGCAACAATG +
Preference number: 2 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSGQKAL*ICTATM
Trigger: CATTGTTGCTGTACAGATCCAGAGAGCCTTTTGTCC...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAACAAGAGATGCTGCTATaGAATGTCCTTAGAGGTAGT +
Preference number: 2 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEQEMLL*NVLRGS
Trigger: ACTACCTCTAAGGACATTTCATAGCAGCATCTCTTG...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCACAGATGCCTCTTATTaGAGTATAGCATCAGGGGAT +
Preference number: 2 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTTDASY*SIASGD
Trigger: ATCCCCTGATGCTATACTTCAATAAGAGGCATCTGT...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAACAGGAAGAATTACAATaGCAGTTCTGTCTCCTTTCC +
Preference number: 2 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEQEELQ*QFCLLS
Trigger: GGAAAGGAGACAGAACTGTCATTGTAATTCTTCCTG...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR GCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCGTAAAAGTGGTCTTTTaGCAATTATCAGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTVKVVF*QLSAPW
Trigger: CCAGGGAGCTGATAATTGGCAAAAGACCACTTTTAC...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAGGAGGTCATCAGGGTTaGAATTTTACACTAACAGGT +
Preference number: 2 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSGGHQG*NFTLTG
Trigger: ACCTGTTAGTGTAAAATTCCAACCCTGATGACCTCC...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAATTAACATCAGATGCTaGTGGTCATCTCCATCCAGT +
Preference number: 2 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEINIRC*WSSPSS
Trigger: ACTGGATGGAGATGACCACCAGCATCTGATGTTAAT...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAAACGAAAATTGGTTCTaGACTCACAGCAGAGAGATC +
Preference number: 2 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPNENWF*THSREI
Trigger: GATCTCTCTGCTGTGAGTTCAGAACCAATTTTCGTT...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
3UTR-3UTR TCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAGTTAGAGAGATGATGTaGACAGTCTTGGTGGTTTAT +
Preference number: 2 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEVREMM*TVLVVY
Trigger: ATAAACCACCAAGACTGTTCACATCATCTCTCTAAC...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTCTAAATGCTCACTGCTaGAGTCTTGGAAGATGCTCT +
Preference number: 2 (lower is better)
Translates to: RLNLFTKADWYTKCCLIILNAHC*SLGRCS
Trigger: AGAGCATCTTCCAAGACTCCAGCAGTGAGCATTTAG...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAATCATCTCTGGGTTTATaGTATGACCTAGATTATAGG +
Preference number: 2 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVESSLGL*YDLDYR
Trigger: CCTATAATCTAGGTCATATCATAAACCCAGAGATGA...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAAGCAAACAATGCATCTaGTTAGCATACATTGGTTCT +
Preference number: 2 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSSKQCI*LAYIGS
Trigger: AGAACCAATGTATGCTAACCAGATGCATTGTTTGCT...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTTCACTGCTGGAGTCTTaGAAGATGCTCTTAAGAGTA +
Preference number: 2 (lower is better)
Translates to: RLNLFTKADWYTKCCLIISLLES*KMLLRV
Trigger: TACTCTTAAGAGCATCTTCCAAGACTCCAGCAGTGA...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CAA 90 bp GAACTATTGAATCTGAATCTCCATTTAATAATATCCTCAGCTGATTaGATACATGCACATGAAAGTTTGGGAAACACTAGTCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: ELLNLNLHLIISSAD*IHAHESLGNTSPGL
Trigger: GAGACCTGGACTAGTGTTTCCCAAACTTTCATGTGCATGTATCAAATCAGCTGAGGATATTATTAAATGGAGATTCAGATTCAATAGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR GCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCAAAGCCCTTTCTAAATaGTATCTTCATGATACCTCT +
Preference number: 2 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTKALSK*YLHDTS
Trigger: AGAGGTATCATGAAGATAGCATTTAGAAAGGGCTTT...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR GCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAACAAGAGTTAATTATATaGCAAGAAGCATTAGTGCCA +
Preference number: 2 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEQELII*QEALVP
Trigger: TGGCACTAATGCTTCTTGGCATATAATTAACTCTTG...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCACTGGTTAGCATACATTaGTTCTGTATATTTCGAGAA +
Preference number: 2 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSLVSIH*FCIFRE
Trigger: TTCTCGAAATATACAGAACCAATGTATGCTAACCAG...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR TCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTACATCTATAAAAGCATaGACTTGGTCCCACATCAAA +
Preference number: 2 (lower is better)
Translates to: RLNLFTKADWYTKCCLIITSIKA*TWSHIK
Trigger: TTTGATGTGGGACCAAGTTCATGCTTTTATAGATGT...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTGAAAAATCACTCAAATaGTATCAAGGACAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIEKSLK*YQGQEE
Trigger: CTCCTCTTGTCCTTGATACCATTTGAGTGATTTTTC...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTACATTTCCACATTCTTaGACTCAGGTAATTCTCTTT +
Preference number: 2 (lower is better)
Translates to: RLNLFTKADWYTKCCLIITFPHS*TQVILF
Trigger: AAAGAGAATTACCTGAGTCCAAGAATGTGGAAATGT...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CCA 72 bp AGCCAGAAGAGGGCCCTCATCAGGAATTGCGCTGGATaGCACTTTGATCTTGGGGTTTCTCAGCCTCCAACT +
Preference number: 3 (lower is better)
Translates to: SQKRALIRNCAG*HFDLGVSQPPT
Trigger: AGTTGGAGGCTGAGAAACCCCAAGATCAAAGTGCCATCCAGCGCAATTCCTGATGAGGGCCCTCTTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 72 bp GAGGGCCCTCATCAGGAATTGCGCTGGATGGCACTTTaGTCTTGGGGTTTCTCAGCCTCCAACTGTGAGAAA +
Preference number: 3 (lower is better)
Translates to: EGPHQELRWMAL*SWGFSASNCEK
Trigger: TTTCTCACAGTTGGAGGCTGAGAAACCCCAAGATCAAAGTGCCATCCAGCGCAATTCCTGATGAGGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTAAAAGAATGGGACCCTaGGAAGCACTGATCTGGAGC +
Preference number: 3 (lower is better)
Translates to: LVYTVGPACECRLQEVTSKRMGP*EALIWS
Trigger: GCTCCAGATCAGTGCTTCCAAGGGTCCCATTCTTTT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTGCCGAGATCACACCATaGCACTCCAGCTTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSAEITP*HSSLGD
Trigger: GTCACCCAAGCTGGAGTGCAATGGTGTGATCTCGGC...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTAACAGATGCCTCTTATaGAAGTATAGCATCAGGGGA +
Preference number: 3 (lower is better)
Translates to: LVYTVGPACECRLQEVTSNRCLL*KYSIRG
Trigger: TCCCCTGATGCTATACTTCAATAAGAGGCATCTGTT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAAGCGCTGGATGGCACTTaGATCTTGGGGTTTCTCAGC +
Preference number: 3 (lower is better)
Translates to: SLLETDNPRGHPRTIESEALDGT*ILGFLS
Trigger: GCTGAGAAACCCCAAGATCAAAGTGCCATCCAGCGC...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTTTCTGTCTCCTTTCCTaGAAAGAGAAAATCTGGAAG +
Preference number: 3 (lower is better)
Translates to: LVYTVGPACECRLQEVTSFCLLS*KEKIWK
Trigger: CTTCCAGATTTTCTCTTTCAAGGAAAGGAGACAGAA...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 72 bp CCTGGATTTGTTCACTGTGACACACTTCCTCCACACTaGTGCAGGCAACTCAAGAGATGCTGCTATGAAATG +
Preference number: 3 (lower is better)
Translates to: PGFVHCDTLPPH*CRQLKRCCYEM
Trigger: CATTTCATAGCAGCATCTCTTGAGTTGCCTGCATCAGTGTGGAGGAAGTGTGTCACAGTGAACAAATCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR GCA 72 bp AGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTaGCAAGTGAGAATACAGCAAGAAGCCAGAAGAGGG +
Preference number: 3 (lower is better)
Translates to: RRDRKVTMSLSL*QVRIQQEARRG
Trigger: CCCTCTTCTGGCTTCTTGCTGTATTCTCACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CCA 72 bp GCAACAATGAATATCACTTCAACAGGTAGCTATTCGTaGAGGAAGTGGCATCCTGGGAACCAAGAAGCACTG +
Preference number: 3 (lower is better)
Translates to: ATMNITSTGSYS*RKWHPGNQEAL
Trigger: CAGTGCTTCTTGGTTCCCAGGATGCCACTTCCTCCACGAATAGCTACCTGTTGAAGTGATATTCATTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTAGACAGGAGAATCTCTaGAACCCAGGAGACAGAGAT +
Preference number: 3 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSRQENL*NPGDRD
Trigger: ATCTCTGTCTCCTGGGTTCAAGAGATTCTCCTGTCT...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTAGAAATAAATGTGTTTaGTTACGCCACCCAGTTTAC +
Preference number: 3 (lower is better)
Translates to: LVYTVGPACECRLQEVTSRNKCV*LRHPVY
Trigger: GTAAACTGGGTGGCGTAACAAAACACATTTATTTCT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CCA 72 bp CTCACAGCAGAGAGATCTCCCACTGAAACGTTTATCTaGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCC +
Preference number: 3 (lower is better)
Translates to: LTAERSPTETFI*RKCLSWDKSFS
Trigger: GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTCTGCTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
3UTR TCA 72 bp AACAGATGCCTCTTATTGAAGTATAGCATCAGGGGATaGGCAGGCCAGAAGAGATTCTGGACAAAAGAGGAA +
Preference number: 3 (lower is better)
Translates to: NRCLLLKYSIRG*AGQKRFWTKEE
Trigger: TTCCTCTTTTGTCCAGAATCTCTTCTGGCCTGCTCATCCCCTGATGCTATACTTCAATAAGAGGCATCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 72 bp GGCACTTTGATCTTGGGGTTTCTCAGCCTCCAACTGTaGGAAATAAATGTGTTTTGTTACGCCACCCAGTTT +
Preference number: 3 (lower is better)
Translates to: GTLILGFLSLQL*EINVFCYATQF
Trigger: AAACTGGGTGGCGTAACAAAACACATTTATTTCTCACAGTTGGAGGCTGAGAAACCCCAAGATCAAAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 72 bp TTTGAGAAAACTGGTCTACACGGTCGGTCCTGCTTGTaGATGTCGTCTTCAGGAGGTAACTTCTATTATCAC +
Preference number: 3 (lower is better)
Translates to: FEKTGLHGRSCL*MSSSGGNFYYH
Trigger: GTGATAATAGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAGTTTTCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCTTTCACCCCACACTGTaGAGATCGGAACTGTGGCAA +
Preference number: 3 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTFHPTL*RSELWQ
Trigger: TTGCCACAGTTCCGATCTCAACAGTGTGGGGTGAAA...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 72 bp GCTTATGTTCTCCTCCTCGTCTGCAAATTCATATGTTaGAGCCCTAACATACAAAGTGATGGCATTTGGAGG +
Preference number: 3 (lower is better)
Translates to: AYVLLLVCKFIC*SPNIQSDGIWR
Trigger: CCTCCAAATGCCATCACTTTGTATGTTAGGGCTTCAACATATGAATTTGCAGACGAGGAGGAGAACATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR GCA 72 bp TCATTCATGACTCTGGAAGACAACACACTCTCTAAATaGTCACTGCTGGAGTCTTGGAAGATGCTCTTAAGA +
Preference number: 3 (lower is better)
Translates to: SFMTLEDNTLSK*SLLESWKMLLR
Trigger: TCTTAAGAGCATCTTCCAAGACTCCAGCAGTGAGCATTTAGAGAGTGTGTTGTCTTCCAGAGTCATGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAACTCACTGCTGGAGTCTaGGAAGATGCTCTTAAGAGT +
Preference number: 3 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVELTAGV*EDALKS
Trigger: ACTCTTAAGAGCATCTTCCAAGACTCCAGCAGTGAG...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCATCAGCTCCCTGGATTaGTTCACTGTGACACACTTC +
Preference number: 3 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTISSLD*FTVTHF
Trigger: GAAGTGTGTCACAGTGAACAAATCCAGGGAGCTGAT...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 72 bp CTGAAGATACAGTCTTCTTGTTTCACCCCACACTGTTaGGATCGGAACTGTGGCAATCTTAACAAGTCATAT +
Preference number: 3 (lower is better)
Translates to: LKIQSSCFTPHC*DRNCGNLNKSY
Trigger: ATATGACTTGTTAAGATTGCCACAGTTCCGATCTCAACAGTGTGGGGTGAAACAAGAAGACTGTATCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 72 bp AACGTTAGAGTGCCTGGACCACAGGAAGAATTACAATaGCAGTTCTGTCTCCTTTCCTTGAAAGAGAAAATC +
Preference number: 3 (lower is better)
Translates to: NVRVPGPQEELQ*QFCLLSLKEKI
Trigger: GATTTTCTCTTTCAAGGAAAGGAGACAGAACTGTCATTGTAATTCTTCCTGTGGTCCAGGCACTCTAACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCGAAGATACAGTCTTCTaGTTTCACCCCACACTGTTG +
Preference number: 3 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTEDTVF*FHPTLL
Trigger: CAACAGTGTGGGGTGAAACAAGAAGACTGTATCTTC...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAGGTAAAAGTGGTCTTTaGCCAATTATCAGCTCCCTG +
Preference number: 3 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEGKSGL*PIISSL
Trigger: CAGGGAGCTGATAATTGGCAAAAGACCACTTTTACC...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAATACATTTCCACATTCTaGGACTCAGGTAATTCTCTT +
Preference number: 3 (lower is better)
Translates to: SLLETDNPRGHPRTIESEYISTF*DSGNSL
Trigger: AAGAGAATTACCTGAGTCCAAGAATGTGGAAATGTA...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CCA 72 bp AGATTCTGGACAAAAGAGGAAGGAGGTCATCAGGGTTaGAATTTTACACTAACAGGTATTGCCACACAAAAA +
Preference number: 3 (lower is better)
Translates to: RFWTKEEGGHQG*NFTLTGIATQK
Trigger: TTTTTGTGTGGCAATACCTGTTAGTGTAAAATTCCAACCCTGATGACCTCCTTCCTCTTTTGTCCAGAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CCA 72 bp AAATGCAGTCTATACTCTTTTACTCTAACTATGGTCTaGGGACCAGGAGAATTGATAACACCTAAGAGCTTG +
Preference number: 3 (lower is better)
Translates to: KCSLYSFTLTMV*GPGELITPKSL
Trigger: CAAGCTCTTAGGTGTTATCAATTCTCCTGGTCCCCAGACCATAGTTAGAGTAAAAGAGTATAGACTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCATATGTGCGGTCCTTTaGAATAAGACCAAATCATCC +
Preference number: 3 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTICAVL*NKTKSS
Trigger: GGATGATTTGGTCTTATTCAAAAGGACCGCACATAT...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR-3UTR CAA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTAGGAGGTCATCAGGGTaGGAATTTTACACTAACAGG +
Preference number: 3 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIRRSSG*EFYTNR
Trigger: CCTGTTAGTGTAAAATTCCAACCCTGATGACCTCCT...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR TCA 72 bp AAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTaGAGAAGATACCTCAAATATGATCTCACGATTGAC +
Preference number: 3 (lower is better)
Translates to: KEKLADFHSCSL*RRYLKYDLTID
Trigger: GTCAATCGTGAGATCATATTTGAGGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR GCA 72 bp AGCTTTACTGTCCAACAAAAGTATCAGATCACATTCTaGAGTTGTGATTTTGTTAGTGTAATTCACCTACAG +
Preference number: 3 (lower is better)
Translates to: SFTVQQKYQITF*SCDFVSVIHLQ
Trigger: CTGTAGGTGAATTACACTAACAAAATCACAACTGCAGAATGTGATCTGATACTTTTGTTGGACAGTAAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CCA 72 bp GATCTGAAGCAAACAATGCATCTGGTTAGCATACATTaGTTCTGTATATTTCGAGAATCACTTAAGTACACA +
Preference number: 3 (lower is better)
Translates to: DLKQTMHLVSIH*FCIFRESLKYT
Trigger: TGTGTACTTAAGTGATTCTCGAAATATACAGAACCAATGTATGCTAACCAGATGCATTGTTTGCTTCAGATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTATGTACGTGATGGGGTaGGGAAGATGGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSMYVMG*GRWGCG
Trigger: CCCACAGCCCCATCTTCCTCACCCCATCACGTACAT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTGCAGAAAACAGCTGGTaGAGGCTGTCCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSAENSW*RLSTWW
Trigger: CCACCATGTGGACAGCCTCCACCAGCTGTTTTCTGC...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTAAGTCGGAGTCCAGGTaGTTGTATTCGCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSKSESR*LYSLVR
Trigger: CCTGACCAGCGAATACAATCACCTGGACTCCGACTT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATTTAGAGCACTCTGGTaGTCCCATCCGGGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKFRALW*SHPGGG
Trigger: CCCGCCGCCCGGATGGGACCACCAGAGTGCTCTAAA...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTTTCACCCCACACTGTTaGGATCGGAACTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSFTPHC*DRNCGN
Trigger: ATTGCCACAGTTCCGATCTCAACAGTGTGGGGTGAA...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAAGACTTTAGAGCACTCTaGTGGTCCCATCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKDFRAL*WSHPGG
Trigger: GCCGCCCGGATGGGACCACCAGAGTGCTCTAAAGTC...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR GCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTCAAGGACAAGAGGAGTaGTGTGTAGCATTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSQGQEE*CVAFPH
Trigger: ATGAGGGAATGCTACACAGCACTCCTCTTGTCCTTG...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTAAAGGAAATACAGGATaGGCACGGTGGCTCATACTG +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSKGNTG*ARWLIL
Trigger: CAGTATGAGCCACCGTGCCCATCCTGTATTTCCTTT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCTTTAGAGCACTCTGGTaGTCCCATCCGGGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTFRALW*SHPGGG
Trigger: CCCGCCGCCCGGATGGGACCACCAGAGTGCTCTAAA...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTAAGGCCCGTTTTCCCTaGCATCATATTCAAGGACAA +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSKARFP*HHIQGQ
Trigger: TTGTCCTTGAATATGATGCCAGGGAAAACGGGCCTT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTAACATCAGATGCTGGTaGTCATCTCCATCCAGTATC +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSNIRCW*SSPSSI
Trigger: GATACTGGATGGAGATGACCACCAGCATCTGATGTT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAAAAGTCGGAGTCCAGGTaGTTGTATTCGCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKKSESR*LYSLVR
Trigger: CCTGACCAGCGAATACAATCACCTGGACTCCGACTT...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTCTATGCTTTTCTTCCTaGACTCAGTGGTCCTATACA +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSLCFSS*TQWSYT
Trigger: TGTATAGGACCACTGAGTTCAGGAAGAAAAGCATAG...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCGACTTTAGAGCACTCTaGTGGTCCCATCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTDFRAL*WSHPGG
Trigger: GCCGCCCGGATGGGACCACCAGAGTGCTCTAAAGTC...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTGGTGATTGTATTCGCTaGTCAGGGTGTGAAAATACA +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSGDCIR*SGCENT
Trigger: TGTATTTTCACACCCTGACCAGCGAATACAATCACC...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTGGAGGTCATCAGGGTTaGAATTTTACACTAACAGGT +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSGGHQG*NFTLTG
Trigger: ACCTGTTAGTGTAAAATTCCAACCCTGATGACCTCC...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAAGATGGCATTTGGAGGTaGGGCCTCTGGGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: SLLETDNPRGHPRTIESEDGIWR*GLWVVI
Trigger: GATTACCACCCAGAGGCCCCACCTCCAAATGCCATC...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAACAGGCCCTGCAAGCATaGAGATACTTTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKQALQA*RYFLTQ
Trigger: CTGTGTCAGAAAGTATCTTCATGCTTGCAGGGCCTG...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTTCTGATAATTGTCCCTaGAGGATCAGTTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSSDNCP*RISFLC
Trigger: GCAAAGAAAACTGATCCTTCAGGGACAATTATCAGA...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAATTTGGGCCAGGTTCTTaGGGTAGCCAAGTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SLLETDNPRGHPRTIESEFGPGS*GSQVPL
Trigger: AAGGGGAACTTGGCTACCTCAAGAACCTGGCCCAAA...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAGGTGGGCAGATCACCTaGGGTCAGGAATTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEGGQIT*GQEFES
Trigger: GCTCTCGAATTCCTGACCTCAGGTGATCTGCCCACC...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTTGTAATCTGGCACTTTaGGAAGCCAAGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSCNLAL*EAKVGR
Trigger: TCTGCCCACCTTGGCTTCTCAAAGTGCCAGATTACA...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCTCCACATCCACAAACTaGGAAGGTGCACCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSSTSTN*EGAPKG
Trigger: TCCCTTAGGTGCACCTTCCCAGTTTGTGGATGTGGA...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTAAAGTCCCAGGAGACTaGAGTGACCAGCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSKVPGD*SDQLQM
Trigger: CATTTGCAGCTGGTCACTCCAGTCTCCTGGGACTTT...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAACAGGCCCTGCAAGCATaGAGATACTTTCTGACACAG +
Preference number: 4 (lower is better)
Translates to: SLLETDNPRGHPRTIESEQALQA*RYFLTQ
Trigger: CTGTGTCAGAAAGTATCTTCATGCTTGCAGGGCCTG...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTACATCTATAAAAGCATaGACTTGGTCCCACATCAAA +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSTSIKA*TWSHIK
Trigger: TTTGATGTGGGACCAAGTTCATGCTTTTATAGATGT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAGGTCGGTCCTGCTTGTaGATGTCGTCTTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSGRSCL*MSSSGG
Trigger: ACCTCCTGAAGACGACATTCACAAGCAGGACCGACC...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCACTGGAGTGACCAGCTaGAAATGCTCTGGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTTGVTS*KCSGLR
Trigger: TCGCAGCCCAGAGCATTTGCAGCTGGTCACTCCAGT...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCAGGCTGTCCACATGGTaGATTTTGTCCTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSRLSTW*ILSFSP
Trigger: AGGACTGAAGGACAAAATCCACCATGTGGACAGCCT...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAAGTGAGGGAGAACTTCTaGTACTTCTTACCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKVRENF*YFLPWH
Trigger: ATGCCAGGGTAAGAAGTACCAGAAGTTCTCCCTCAC...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCACAAAGTGATGGCATTTaGAGGTGGGGCCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSQSDGI*RWGLWV
Trigger: CACCCAGAGGCCCCACCTCCAAATGCCATCACTTTG...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCCAGGGTAAAGACTACTaGGATAGGCCACATGATTTG +
Preference number: 4 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSQGKDY*DRPHDL
Trigger: CAAATCATGTGGCCTATCTCAGTAGTCTTTACCCTG...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTCCCAGGAGACTGGAGTaGCCAGCTGCAAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIPRRLE*PAANAL
Trigger: CAGAGCATTTGCAGCTGGTCACTCCAGTCTCCTGGG...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTAAGCGCCAATGCTACTaGCCACTAAATTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSKRQCY*PLNCCF
Trigger: GAAGCAACAATTTAGTGGTCAGTAGCATTGGCGCTT...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAAACAGGCCCAAGGTCTaGGTGTGTCAGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVENRPKV*VCQKPK
Trigger: CTTTGGCTTCTGACACACTCAGACCTTGGGCCTGTT...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCTCCTTTTGTCAATTTTaGTTCACCTGTTCGGCACCC +
Preference number: 4 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSSFCQF*FTCSAP
Trigger: GGGTGCCGAACAGGTGAAGCAAAATTGACAAAAGGA...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR GCA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCTCTTACAGTGCGAAGTaGTATGTGTGTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSSYSAK*YVCCIL
Trigger: GAGGATGCAACACACATAGCACTTCGCACTGTAAGA...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAGCAGAAAACAGCTGGTaGAGGCTGTCCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPAENSW*RLSTWW
Trigger: CCACCATGTGGACAGCCTCCACCAGCTGTTTTCTGC...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTGGACAAAAGGCTCTCTaGATCTGTACAGCAACAATG +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSGQKAL*ICTATM
Trigger: CATTGTTGCTGTACAGATCCAGAGAGCCTTTTGTCC...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTTTCACAAAGGCAGATTaGTATACCAAATGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSFTKAD*YTKCCL
Trigger: TAAGCAACATTTGGTATACCAATCTGCCTTTGTGAA...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTATCCTGCAGTTCTTTTaGTCCTTAATACAATCAATC +
Preference number: 4 (lower is better)
Translates to: LVYTVGPACECRLQEVTSILQFF*SLIQSI
Trigger: GATTGATTGTATTAAGGACCAAAAGAACTGCAGGAT...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CAA 72 bp AAAAGTGGTCTTTTGCCAATTATCAGCTCCCTGGATTaGTTCACTGTGACACACTTCCTCCACACTGATGCA +
Preference number: 4 (lower is better)
Translates to: KSGLLPIISSLD*FTVTHFLHTDA
Trigger: TGCATCAGTGTGGAGGAAGTGTGTCACAGTGAACAAATCCAGGGAGCTGATAATTGGCAAAAGACCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CAA 72 bp GAAGCCAAAGCGCCAATGCTACTGACCACTAAATTGTaGCTTCTTAAACTGGGGTCCATGCAAAATCCTTGT +
Preference number: 4 (lower is better)
Translates to: EAKAPMLLTTKL*LLKLGSMQNPC
Trigger: ACAAGGATTTTGCATGGACCCCAGTTTAAGAAGCAACAATTTAGTGGTCAGTAGCATTGGCGCTTTGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CAA 72 bp TCAGAAGCCAAAGCGCCAATGCTACTGACCACTAAATaGTTGCTTCTTAAACTGGGGTCCATGCAAAATCCT +
Preference number: 4 (lower is better)
Translates to: SEAKAPMLLTTK*LLLKLGSMQNP
Trigger: AGGATTTTGCATGGACCCCAGTTTAAGAAGCAACAATTTAGTGGTCAGTAGCATTGGCGCTTTGGCTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAAACCGGGCAGCTAGATTaGATCCTTTTGTCAATTTTG +
Preference number: 4 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKTGQLD*ILLSIL
Trigger: CAAAATTGACAAAAGGATTCAATCTAGCTGCCCGGT...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTTCGCTGGTCAGGGTGTaGAAATACACTAATACATAC +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSSLVRV*KYTNTY
Trigger: GTATGTATTAGTGTATTTTCACACCCTGACCAGCGA...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATTTGTCCTTCAGTCCTaGGACAGAAAAGGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKFVLQS*DRKGGK
Trigger: TTTACCACCTTTTCTGTCTCAGGACTGAAGGACAAA...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCACACTTCCTCCACACTaGTGCAGGCAACTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTTLPPH*CRQLKR
Trigger: TCTCTTGAGTTGCCTGCATCAGTGTGGAGGAAGTGT...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAATATAGCATCAGGGGATaGGCAGGCCAGAAGAGATTC +
Preference number: 4 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEYSIRG*AGQKRF
Trigger: GAATCTCTTCTGGCCTGCTCATCCCCTGATGCTATA...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAGTGGTAATCATGTCATaGGGGTGGAGCCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSVVIMS*GWSPHE
Trigger: TTCATGAGGGCTCCACCCTCATGACATGATTACCAC...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCCTTCAAATCAGGCCCTaGAAGCATGAAGATACTTTC +
Preference number: 4 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSLQIRP*KHEDTF
Trigger: GAAAGTATCTTCATGCTTGCAGGGCCTGATTTGAAG...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR GCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTCTTCAAATCAGGCCCTaGAAGCATGAAGATACTTTC +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSLQIRP*KHEDTF
Trigger: GAAAGTATCTTCATGCTTGCAGGGCCTGATTTGAAG...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTGTGACCAGCTGCAAATaGTCTGGGCTGCGAAACACC +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIVTSCK*SGLRNT
Trigger: GGTGTTTCGCAGCCCAGAGCATTTGCAGCTGGTCAC...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTGTAAAAGTGGTCTTTTaGCAATTATCAGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSVKVVF*QLSAPW
Trigger: CCAGGGAGCTGATAATTGGCAAAAGACCACTTTTAC...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCTTCTTGGTTATCTTCTaGAGCACCAGGTTTCTCACT +
Preference number: 4 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSFLVIF*STRFLT
Trigger: AGTGAGAAACCTGGTGCTCCAGAAGATAACCAAGAA...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTTTCTTGGTTATCTTCTaGAGCACCAGGTTTCTCACT +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSFLVIF*STRFLT
Trigger: AGTGAGAAACCTGGTGCTCCAGAAGATAACCAAGAA...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTTATGTTCTCTACATATaGACCACAGAAGTCCGACTC +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSYVLYI*TTEVRL
Trigger: GAGTCGGACTTCTGTGGTCCATATGTAGAGAACATA...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CAA 72 bp GGCAGAACCATCTCAGTGCTTAGGTTTGTATTTGTATaGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTG +
Preference number: 4 (lower is better)
Translates to: GRTISVLRFVFV*TSLLRPSSTLV
Trigger: CACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAACCTAAGCACTGAGATGGTTCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCTGATAATTGTCCCTaGAGGATCAGTTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKSDNCP*RISFLC
Trigger: GCAAAGAAAACTGATCCTTCAGGGACAATTATCAGA...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAGGAACCAAGAAGCACTaGAAGATGGCAGGTCACAAA +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSGTKKH*KMAGHK
Trigger: TTTGTGACCTGCCATCTTTCAGTGCTTCTTGGTTCC...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTGTACATTATTCAGTTTaGGAAAACTGGTCTACACGG +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSVHYSV*ENWSTR
Trigger: CCGTGTAGACCAGTTTTCTCAAACTGAATAATGTAC...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAGCAGTACATGCCTGTTaGACTGAAAAGAGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSAVHAC*TEKSLY
Trigger: GTACAGGCTCTTTTCAGTTCAACAGGCATGTACTGC...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAAAGGGAACTCTCAGCTaGTGTGCGATAGCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPKGTLS*CAIAAF
Trigger: AAAAGCCGCTATCGCACAGCAGCTGAGAGTTCCCTT...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR GCA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCTGTTGTGCTCGTAAGTaGTGCTCTATAGAACAGTTA +
Preference number: 4 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSCCARK*CSIEQL
Trigger: TAACTGTTCTATAGAGCAGCACTTACGAGCACAACA...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR GCA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATTTATCTGGAGAAAATaGCTCTCTTGGGACAAATCC +
Preference number: 4 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKFIWRK*LSWDKS
Trigger: GGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAA...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR GCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTCCGAGATCACACCATTaGACTCCAGCTTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIPRSHH*TPAWVT
Trigger: TGTCACCCAAGCTGGAGTGCAATGGTGTGATCTCGG...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATGCTGGTATTCACAATaGCTGTACAGTTCAGTAATG +
Preference number: 4 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKCWYSQ*LYSSVM
Trigger: CATTACTGAACTGTACAGCCATTGTGAATACCAGCA...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAAGGCTGTCCACATGGTaGATTTTGTCCTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVERLSTW*ILSFSP
Trigger: AGGACTGAAGGACAAAATCCACCATGTGGACAGCCT...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAATGGAGGCTGTCCACATaGTGGATTTTGTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEWRLST*WILSFS
Trigger: ACTGAAGGACAAAATCCACCATGTGGACAGCCTCCA...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAAACTGAAACGTTTATCTaGAGAAAATGCCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKTETFI*RKCLSW
Trigger: CCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGT...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTCATCCGACATCTGACTaGCTGCCTGGATGTGATGAC +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIHPTSD*LPGCDD
Trigger: GTCATCACATCCAGGCAGCCAGTCAGATGTCGGATG...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAAATTAACATCAGATGCTaGTGGTCATCTCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: SLLETDNPRGHPRTIESEINIRC*WSSPSS
Trigger: ACTGGATGGAGATGACCACCAGCATCTGATGTTAAT...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CAA 72 bp GTTTCTCAGCCTCCAACTGTGAGAAATAAATGTGTTTaGTTACGCCACCCAGTTTACGGTATTCACCCAAAA +
Preference number: 4 (lower is better)
Translates to: VSQPPTVRNKCV*LRHPVYGIHPK
Trigger: TTTTGGGTGAATACCGTAAACTGGGTGGCGTAACAAAACACATTTATTTCTCACAGTTGGAGGCTGAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CAA 72 bp ATATCCTCAGCTGATTTGATACATGCACATGAAAGTTaGGGAAACACTAGTCCAGGTCTCCACAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: ISSADLIHAHES*GNTSPGLHREC
Trigger: ACATTCTCTGTGGAGACCTGGACTAGTGTTTCCCAAACTTTCATGTGCATGTATCAAATCAGCTGAGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCATTATAAAGAAAAGGTaGTCGAACAGTGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSIIKKR*SNSVFL
Trigger: CAGGAAGACACTGTTCGATCACCTTTTCTTTATAAT...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCAATTCCTCTTGTACTTaGCATCAACAACATCGTAGA +
Preference number: 4 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSNSSCT*HQQHRR
Trigger: TCTACGATGTTGTTGATGTCAAGTACAAGAGGAATT...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTAATTCCTCTTGTACTTaGCATCAACAACATCGTAGA +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSNSSCT*HQQHRR
Trigger: TCTACGATGTTGTTGATGTCAAGTACAAGAGGAATT...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCATCCTTTTGTCAATTTTaGTTCACCTGTTCGGCACCC +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSSFCQF*FTCSAP
Trigger: GGGTGCCGAACAGGTGAAGCAAAATTGACAAAAGGA...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTAAGGGAACTCTCAGCTaGTGTGCGATAGCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIKGTLS*CAIAAF
Trigger: AAAAGCCGCTATCGCACAGCAGCTGAGAGTTCCCTT...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCAGGATAACCACGTTTTaGAGAATTGATGACACAGAA +
Preference number: 4 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSRITTF*RIDDTE
Trigger: TTCTGTGTCATCAATTCTGCAAAACGTGGTTATCCT...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR GCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTAGGATCAGTTTTCTTTaGTTGTCAATATCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSRISFL*LSISPS
Trigger: GGAAGGAGATATTGACAAGCAAAGAAAACTGATCCT...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCATCTCTAAATGCTCACTaGTGGAGTCTTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSSLNAH*WSLGRC
Trigger: GCATCTTCCAAGACTCCAGCAGTGAGCATTTAGAGA...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAAAGGCAACTCAAGAGATaGTGCTATGAAATGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SLLETDNPRGHPRTIESERQLKR*CYEMSL
Trigger: TAAGGACATTTCATAGCAGCATCTCTTGAGTTGCCT...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTTCCACATCCACAAACTaGGAAGGTGCACCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIISTSTN*EGAPKG
Trigger: TCCCTTAGGTGCACCTTCCCAGTTTGTGGATGTGGA...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCATGGAGGCTGTCCACATaGTGGATTTTGTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPWRLST*WILSFS
Trigger: ACTGAAGGACAAAATCCACCATGTGGACAGCCTCCA...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAAAGCTTGATGAGCTTTTaGCCAAGTGTGTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKSLMSF*PSVLLF
Trigger: AAAAAGTAACACACTTGGCCAAAAGCTCATCAAGCT...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCAGAAGCACTGAAAGATaGCAGGTCACAAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTRSTER*QVTNLV
Trigger: CACCAGATTTGTGACCTGCCATCTTTCAGTGCTTCT...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCACTAAATGCTCACTGCTaGAGTCTTGGAAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSLNAHC*SLGRCS
Trigger: AGAGCATCTTCCAAGACTCCAGCAGTGAGCATTTAG...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAGTGGTGGAAGGCTTATaGAGAACAGAGGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEVVEGL*RTEAVL
Trigger: TAAAACAGCCTCTGTTCTCCATAAGCCTTCCACCAC...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAGTCAATCTGTTCTGGTaGTATGGCAGAAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPVNLFW*YGRKQL
Trigger: CAGCTGTTTTCTGCCATATCACCAGAACAGATTGAC...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAATATACCATACCAGGTaGGGGAGAACTTCTGGTACT +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPIYHTR*GRTSGT
Trigger: AGTACCAGAAGTTCTCCCTCACCTGGTATGGTATAT...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAACAGATGCCTCTTATTaGAGTATAGCATCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVETDASY*SIASGD
Trigger: ATCCCCTGATGCTATACTTCAATAAGAGGCATCTGT...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAATTCTTTGATCTCCAATaGAGAATTAGTTTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SLLETDNPRGHPRTIESEFFDLQ*RISLGR
Trigger: TCTGCCCAAACTAATTCTTCATTGGAGATCAAAGAA...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCACAGGAAGAATTACAATaGCAGTTCTGTCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSQEELQ*QFCLLS
Trigger: GGAAAGGAGACAGAACTGTCATTGTAATTCTTCCTG...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAATCTGGATTTGAATCCTaGTTCTACCACTCAATATGT +
Preference number: 4 (lower is better)
Translates to: SLLETDNPRGHPRTIESESGFES*FYHSIC
Trigger: ACATATTGAGTGGTAGAATCAGGATTCAAATCCAGA...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAAGTCAGATCTGGATTTaGATCCTGATTCTACCACTC +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSSQIWI*ILILPL
Trigger: GAGTGGTAGAATCAGGATTCAAATCCAGATCTGACT...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTCAAGAGTTAATTATATaGCAAGAAGCATTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSQELII*QEALVP
Trigger: TGGCACTAATGCTTCTTGGCATATAATTAACTCTTG...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAATGTCTCTCTCTCTCTaGCAAGTGAGAATACAGCAA +
Preference number: 4 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEMSLSL*QVRIQQ
Trigger: TTGCTGTATTCTCACTTGGCAGAGAGAGAGAGACAT...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCATCATCCTCCTCTTCTTaGTTATCTTCTGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPSSSSS*LSSGAP
Trigger: TGGTGCTCCAGAAGATAACCAAGAAGAGGAGGATGA...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCCCTTTGAACGAAATGTaGGATGTACAAAATAAACAG +
Preference number: 4 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSPLNEM*DVQNKQ
Trigger: CTGTTTATTTTGTACATCCCACATTTCGTTCAAAGG...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTACATTTCCACATTCTTaGACTCAGGTAATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSTFPHS*TQVILF
Trigger: AAAGAGAATTACCTGAGTCCAAGAATGTGGAAATGT...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCTCACTGCTGGAGTCTTaGAAGATGCTCTTAAGAGTA +
Preference number: 4 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTSLLES*KMLLRV
Trigger: TACTCTTAAGAGCATCTTCCAAGACTCCAGCAGTGA...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAAGAAAAATCACTCAAATaGTATCAAGGACAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLLETDNPRGHPRTIESEEKSLK*YQGQEE
Trigger: CTCCTCTTGTCCTTGATACCATTTGAGTGATTTTTC...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTAGGAATTGCGCTGGATaGCACTTTGATCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIRNCAG*HFDLGV
Trigger: AACCCCAAGATCAAAGTGCCATCCAGCGCAATTCCT...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCATGCACATGAAAGTTTaGGAAACACTAGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTMHMKV*ETLVQV
Trigger: GACCTGGACTAGTGTTTCCCAAACTTTCATGTGCAT...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAACTCTAACTATGGTCTaGGGACCAGGAGAATTGATA +
Preference number: 4 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVETLTMV*GPGELI
Trigger: TATCAATTCTCCTGGTCCCCAGACCATAGTTAGAGT...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCATCGCTGGTCAGGGTGTaGAAATACACTAATACATAC +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPSLVRV*KYTNTY
Trigger: GTATGTATTAGTGTATTTTCACACCCTGACCAGCGA...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTGTCAATCTGTTCTGGTaGTATGGCAGAAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIVNLFW*YGRKQL
Trigger: CAGCTGTTTTCTGCCATATCACCAGAACAGATTGAC...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAAGAGAGATCTCCCACTaGAACGTTTATCTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPREISH*NVYLEK
Trigger: TTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTCT...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR TCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCCTCAGCCTCCAACTGTaGGAAATAAATGTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTLSLQL*EINVFC
Trigger: ACAAAACACATTTATTTCTCACAGTTGGAGGCTGAG...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTAGGTTCAGAAAAAGTTaGGAAACAGGCCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIRFRKS*ETGPRS
Trigger: AGACCTTGGGCCTGTTTCTCAACTTTTTCTGAACCT...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAAACTCTCAGCTGCTGTaGGATAGCGGCTTTTATATT +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPNSQLL*DSGFYI
Trigger: AATATAAAAGCCGCTATCGCACAGCAGCTGAGAGTT...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR GCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTTCTTACAGTGCGAAGTaGTATGTGTGTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIISYSAK*YVCCIL
Trigger: GAGGATGCAACACACATAGCACTTCGCACTGTAAGA...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCATTAAACTGGGGTCCATaGAAAATCCTTGTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSLNWGP*KILVEY
Trigger: ATACTCCACAAGGATTTTGCATGGACCCCAGTTTAA...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCACACCTAAGGGATCCATaGAATGGGAACTTTGATTTG +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPHLRDP*NGNFDL
Trigger: CAAATCAAAGTTCCCATTCCATGGATCCCTTAGGTG...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAGAATTTAATTCATCTTaGCATGAGTCACCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEEFNSS*HESPQL
Trigger: AAGCTGGGGTGACTCATGCCAAGATGAATTAAATTC...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTTCATCCTCCTCTTCTTaGTTATCTTCTGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIISSSSS*LSSGAP
Trigger: TGGTGCTCCAGAAGATAACCAAGAAGAGGAGGATGA...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAGGTGATTGTATTCGCTaGTCAGGGTGTGAAAATACA +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPGDCIR*SGCENT
Trigger: TGTATTTTCACACCCTGACCAGCGAATACAATCACC...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCATTAGCTCACAAGATCTaGTCTAACAAAGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSLAHKI*SNKVLS
Trigger: AGACAGGACTTTGTTAGACCAGATCTTGTGAGCTAA...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAATTATAAAGAAAAGGTaGTCGAACAGTGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSIIKKR*SNSVFL
Trigger: CAGGAAGACACTGTTCGATCACCTTTTCTTTATAAT...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTTTTGTCCTTCAGTCCTaGGACAGAAAAGGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIFVLQS*DRKGGK
Trigger: TTTACCACCTTTTCTGTCTCAGGACTGAAGGACAAA...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCTCTGTACAGCAACAATaGATATCACTTCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTSVQQQ*ISLQQV
Trigger: TACCTGTTGAAGTGATATTCATTGTTGCTGTACAGA...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTCAAGAGATGCTGCTATaGAATGTCCTTAGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIQEMLL*NVLRGS
Trigger: ACTACCTCTAAGGACATTTCATAGCAGCATCTCTTG...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCAGGATAACCACGTTTTaGAGAATTGATGACACAGAA +
Preference number: 4 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTRITTF*RIDDTE
Trigger: TTCTGTGTCATCAATTCTGCAAAACGTGGTTATCCT...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAGAATTTAATTCATCTTaGCATGAGTCACCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPEFNSS*HESPQL
Trigger: AAGCTGGGGTGACTCATGCCAAGATGAATTAAATTC...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCCACCCTTTAAGTTTCTaGAGATCTTCCTTCAAATCA +
Preference number: 4 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTHPLSF*RSSFKS
Trigger: TGATTTGAAGGAAGATCTCCAGAAACTTAAAGGGTG...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCATGGTACTTCTTACCCTaGCATCATATTCAAGGACAA +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPWYFLP*HHIQGQ
Trigger: TTGTCCTTGAATATGATGCCAGGGTAAGAAGTACCA...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAACATGCAAAATCCTTGTaGAGTATATATGTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEHAKSL*SIYVLG
Trigger: ACCCAACACATATATACTCCACAAGGATTTTGCATG...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CAA 72 bp TCTTTTACTCTAACTATGGTCTGGGGACCAGGAGAATaGATAACACCTAAGAGCTTGTTAGAAACTGATAAT +
Preference number: 4 (lower is better)
Translates to: SFTLTMVWGPGE*ITPKSLLETDN
Trigger: ATTATCAGTTTCTAACAAGCTCTTAGGTGTTATCAATTCTCCTGGTCCCCAGACCATAGTTAGAGTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTGTTAGAGAGATGATGTaGACAGTCTTGGTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIVREMM*TVLVVY
Trigger: ATAAACCACCAAGACTGTTCACATCATCTCTCTAAC...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR GCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAAGGATCAGTTTTCTTTaGTTGTCAATATCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPRISFL*LSISPS
Trigger: GGAAGGAGATATTGACAAGCAAAGAAAACTGATCCT...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR GCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCATGTGCTCGTAAGTGCTaGTCTATAGAACAGTTAATA +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPCARKC*SIEQLI
Trigger: TATTAACTGTTCTATAGAGCAGCACTTACGAGCACA...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR GCA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAAAAGCCCTTTCTAAATaGTATCTTCATGATACCTCT +
Preference number: 4 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSKALSK*YLHDTS
Trigger: AGAGGTATCATGAAGATAGCATTTAGAAAGGGCTTT...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTTGCTGGTATTCACAATaGCTGTACAGTTCAGTAATG +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIICWYSQ*LYSSVM
Trigger: CATTACTGAACTGTACAGCCATTGTGAATACCAGCA...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCACACCCTTTAAGTTTCTaGAGATCTTCCTTCAAATCA +
Preference number: 4 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPHPLSF*RSSFKS
Trigger: TGATTTGAAGGAAGATCTCCAGAAACTTAAAGGGTG...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CCA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCCCTTTGAACGAAATGTaGGATGTACAAAATAAACAG +
Preference number: 4 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTPLNEM*DVQNKQ
Trigger: CTGTTTATTTTGTACATCCCACATTTCGTTCAAAGG...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAATTAAAACCAAATATTaGCAGAACCATCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEIKTKY*QNHLSA
Trigger: AGCACTGAGATGGTTCTGCCAATATTTGGTTTTAAT...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR TCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTCATTTAAAAACTAACTaGAGATACCCCACCACAACA +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIHLKTN*RYPTTT
Trigger: TGTTGTGGTGGGGTATCTTCAGTTAGTTTTTAAATG...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTAGCAAACAATGCATCTaGTTAGCATACATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIISKQCI*LAYIGS
Trigger: AGAACCAATGTATGCTAACCAGATGCATTGTTTGCT...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
3UTR CAA 72 bp CCTTGTGAAGAAGATACCTCAAATATGATCTCACGATaGACTGTAGAAGATGAAGTTAAAGTTGCAGACTTT +
Preference number: 4 (lower is better)
Translates to: PCEEDTSNMISR*TVEDEVKVADF
Trigger: AAAGTCTGCAACTTTAACTTCATCTTCTACAGTCAATCGTGAGATCATATTTGAGGTATCTTCTTCACAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTCTGGTTAGCATACATTaGTTCTGTATATTTCGAGAA +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIILVSIH*FCIFRE
Trigger: TTCTCGAAATATACAGAACCAATGTATGCTAACCAG...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CCA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTATGTATATGTATATATaGTTAGGCCTACCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIMYMYI*LGLPGN
Trigger: ATTGCCTGGTAGGCCTAACCATATATACATATACAT...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTTTCATCCTCCTCTTCTaGGTTATCTTCTGGAGCACC +
Preference number: 5 (lower is better)
Translates to: LVYTVGPACECRLQEVTSFILLF*VIFWST
Trigger: GGTGCTCCAGAAGATAACCAAGAAGAGGAGGATGAA...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS TCA 90 bp GTAGCTATTCGTGGAGGAAGTGGCATCCTGGGAACCAAGAAGCACTaGAAGATGGCAGGTCACAAATCTGGTGATGGGGGATATGATGTA +
Preference number: 5 (lower is better)
Translates to: VAIRGGSGILGTKKH*KMAGHKSGDGGYDV
Trigger: TACATCATATCCCCCATCACCAGATTTGTGACCTGCCATCTTTCAGTGCTTCTTGGTTCCCAGGATGCCACTTCCTCCACGAATAGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369443.10
ENST00000491626.5
CDS-3UTR CAA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTTGGAGTATATATGTGTaGGGTGTAGGAAAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: LVYTVGPACECRLQEVTSWSIYV*GVGKCP
Trigger: TGGGCACTTTCCTACACCCAACACATATATACTCCA...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS CCA 90 bp TTCGTGGAGGAAGTGGCATCCTGGGAACCAAGAAGCACTGAAAGATaGCAGGTCACAAATCTGGTGATGGGGGATATGATGTATAGTAAG +
Preference number: 5 (lower is better)
Translates to: FVEEVASWEPRSTER*QVTNLVMGDMMYSK
Trigger: CTTACTATACATCATATCCCCCATCACCAGATTTGTGACCTGCCATCTTTCAGTGCTTCTTGGTTCCCAGGATGCCACTTCCTCCACGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369443.10
ENST00000491626.5
CDS-3UTR CAA 90 bp CTGGTCTACACGGTCGGTCCTGCTTGTGAATGTCGTCTTCAGGAGGTAACTTCTGAAGTGCTATGTGTGTaGCATCCTCTAAAGGATAAC +
Preference number: 5 (lower is better)
Translates to: LVYTVGPACECRLQEVTSEVLCV*HPLKDN
Trigger: GTTATCCTTTAGAGGATGCAACACACATAGCACTTC...AGAAGTTACCTCCTGAAGACGACATTCACAAGCAGGACCGACCGTGTAGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS TCA 90 bp GGCATCATATTCAAGGACAAAAGGAGGAAAGTCAATCTGTTCTGGTaGTATGGCAGAAAACAGCTGGTGGAGGCTGTCCACATGGTGGAT +
Preference number: 5 (lower is better)
Translates to: GIIFKDKRRKVNLFW*YGRKQLVEAVHMVD
Trigger: ATCCACCATGTGGACAGCCTCCACCAGCTGTTTTCTGCCATATCACCAGAACAGATTGACTTTCCTCCTTTTGTCCTTGAATATGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000491626.5
CDS CCA 90 bp GCAACAATGAATATCACTTCAACAGGTAGCTATTCGTGGAGGAAGTaGCATCCTGGGAACCAAGAAGCACTGAAAGATGGCAGGTCACAA +
Preference number: 5 (lower is better)
Translates to: ATMNITSTGSYSWRK*HPGNQEALKDGRSQ
Trigger: TTGTGACCTGCCATCTTTCAGTGCTTCTTGGTTCCCAGGATGCCACTTCCTCCACGAATAGCTACCTGTTGAAGTGATATTCATTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369443.10
ENST00000491626.5
CDS TCA 90 bp GCTTGTCAATATCTCCTTCCATTCGAGCAAAAGCATGAGAGCCAATaGAAGAGAGATCAACTCCCAAGCCTTCATCCTCCTCTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: ACQYLLPFEQKHESQ*KRDQLPSLHPPLLG
Trigger: ACCAAGAAGAGGAGGATGAAGGCTTGGGAGTTGATCTCTCTTTCATTGGCTCTCATGCTTTTGCTCGAATGGAAGGAGATATTGACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000464026.1
ENST00000493555.5
CDS-3UTR CAA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATTCATCCTCCTCTTCTaGGTTATCTTCTGGAGCACC +
Preference number: 5 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKFILLF*VIFWST
Trigger: GGTGCTCCAGAAGATAACCAAGAAGAGGAGGATGAA...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCACATGGTGGATTTaGTCCTTCAGTCCTGAGACA +
Preference number: 5 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKSTWWI*SFSPET
Trigger: TGTCTCAGGACTGAAGGACAAAATCCACCATGTGGA...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAGCGCTGGATGGCACTTaGATCTTGGGGTTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSALDGT*ILGFLS
Trigger: GCTGAGAAACCCCAAGATCAAAGTGCCATCCAGCGC...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAAATCCTTTTGTCAATTTaGCTTCACCTGTTCGGCACC +
Preference number: 5 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKILLSI*LHLFGT
Trigger: GGTGCCGAACAGGTGAAGCAAAATTGACAAAAGGAT...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAAACAGATCCTCAGATCTaGCTTGACATAACCAGCGAT +
Preference number: 5 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKTDPQI*LDITSD
Trigger: ATCGCTGGTTATGTCAAGCAAGATCTGAGGATCTGT...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTGAAGATACAGTCTTCTaGTTTCACCCCACACTGTTG +
Preference number: 5 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSEDTVF*FHPTLL
Trigger: CAACAGTGTGGGGTGAAACAAGAAGACTGTATCTTC...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAAAGACAGGAGAATCTCTaGAACCCAGGAGACAGAGAT +
Preference number: 5 (lower is better)
Translates to: SLLETDNPRGHPRTIESERQENL*NPGDRD
Trigger: ATCTCTGTCTCCTGGGTTCAAGAGATTCTCCTGTCT...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS TCA 90 bp GCTCGTAAGTGCTGCTCTATAGAACAGTTAATATACCATACCAGGTaGGGGAGAACTTCTGGTACTTCTTACCCTGGCATCATATTCAAG +
Preference number: 5 (lower is better)
Translates to: ARKCCSIEQLIYHTR*GRTSGTSYPGIIFK
Trigger: CTTGAATATGATGCCAGGGTAAGAAGTACCAGAAGTTCTCCCTCACCTGGTATGGTATATTAACTGTTCTATAGAGCAGCACTTACGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCTGTGAGACTTTCATaGCTGGTATTCACAATGGCT +
Preference number: 5 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKSVRLS*LVFTMA
Trigger: AGCCATTGTGAATACCAGCAATGAAAGTCTCACAGA...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCAGCCAACAGAAGACATaGACTGCTCTTTTGCTAGTT +
Preference number: 5 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSSQQKT*TALLLV
Trigger: AACTAGCAAAAGAGCAGTCAATGTCTTCTGTTGGCT...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAATTTCACCCCACACTGTaGAGATCGGAACTGTGGCAA +
Preference number: 5 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEFHPTL*RSELWQ
Trigger: TTGCCACAGTTCCGATCTCAACAGTGTGGGGTGAAA...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAACATGCACATGAAAGTTaGGGAAACACTAGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: SLLETDNPRGHPRTIESEHAHES*GNTSPG
Trigger: ACCTGGACTAGTGTTTCCCAAACTTTCATGTGCATG...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS TCA 90 bp ACAAACTGGGAAGGTGCACCTAAGGGATCCATGGAATGGGAACTTTaGTTTGTCTTTTCCCAAAATCCTCAGCAATTCAATATTCACTGG +
Preference number: 5 (lower is better)
Translates to: TNWEGAPKGSMEWEL*FVFSQNPQQFNIHW
Trigger: CCAGTGAATATTGAATTGCTGAGGATTTTGGGAAAAGACAAATCAAAGTTCCCATTCCATGGATCCCTTAGGTGCACCTTCCCAGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000494224.1
CDS TCA 90 bp GAGATCTTCCTTCAAATCAGGCCCTGCAAGCATGAAGATACTTTCTaGCACAGGATTCTTATCTGTGAGACTTTCATTGCTGGTATTCAC +
Preference number: 5 (lower is better)
Translates to: EIFLQIRPCKHEDTF*HRILICETFIAGIH
Trigger: GTGAATACCAGCAATGAAAGTCTCACAGATAAGAATCCTGTGTCAGAAAGTATCTTCATGCTTGCAGGGCCTGATTTGAAGGAAGATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000493555.5
ENST00000494224.1
CDS CCA 90 bp AATATACCATACCAGGTGAGGGAGAACTTCTGGTACTTCTTACCCTaGCATCATATTCAAGGACAAAAGGAGGAAAGTCAATCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: NIPYQVRENFWYFLP*HHIQGQKEESQSVL
Trigger: CAGAACAGATTGACTTTCCTCCTTTTGTCCTTGAATATGATGCCAGGGTAAGAAGTACCAGAAGTTCTCCCTCACCTGGTATGGTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCAACCGGGCAGCTAGATaGAATCCTTTTGTCAATTTT +
Preference number: 5 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSNRAAR*NPFVNF
Trigger: AAAATTGACAAAAGGATTCAATCTAGCTGCCCGGTT...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAATCCTTTTCCGCCTTCAAATTCCTCTaGTACTTGACATCAACAACA +
Preference number: 5 (lower is better)
Translates to: PTETFIWRKCLSWDKSFSAFKFL*YLTSTT
Trigger: TGTTGTTGATGTCAAGTACAAGAGGAATTTGAAGGC...GGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp TGCCCTTATAAGAAGAGACAGGAAAGTAACGATGTCTCTCTCTCTCTGCCAAGTGCCTTCAAATTCCTCTaGTACTTGACATCAACAACA +
Preference number: 5 (lower is better)
Translates to: CPYKKRQESNDVSLSLPSAFKFL*YLTSTT
Trigger: TGTTGTTGATGTCAAGTACAAGAGGAATTTGAAGGC...ACTTGGCAGAGAGAGAGAGACATCGTTACTTTCCTGTCTCTTCTTATAAGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAATCCACATGGTGGATTTaGTCCTTCAGTCCTGAGACA +
Preference number: 5 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVESTWWI*SFSPET
Trigger: TGTCTCAGGACTGAAGGACAAAATCCACCATGTGGA...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAACAATACAAACGAAAATaGGTTCTGAACTCACAGCAG +
Preference number: 5 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKQYKRK*VLNSQQ
Trigger: CTGCTGTGAGTTCAGAACCAATTTTCGTTTGTATTG...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCCTCACTGCTGGAGTCTaGGAAGATGCTCTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTLTAGV*EDALKS
Trigger: ACTCTTAAGAGCATCTTCCAAGACTCCAGCAGTGAG...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAATCAGCTCCCTGGATTaGTTCACTGTGACACACTTC +
Preference number: 5 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEISSLD*FTVTHF
Trigger: GAAGTGTGTCACAGTGAACAAATCCAGGGAGCTGAT...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAAGCCACCCCAGAACTATaGAATCTGAATCTCCATTTA +
Preference number: 5 (lower is better)
Translates to: SLLETDNPRGHPRTIESEATPEL*NLNLHL
Trigger: TAAATGGAGATTCAGATTCAATAGTTCTGGGGTGGC...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS TCA 90 bp ATACACGTAGCTCATGCATCAGATGCAAGGTTCCTTTCTTGCTTCTaGTGTCCTTATGTATCTAACAGTCCTGAAGGGTTGTCTTACTTT +
Preference number: 5 (lower is better)
Translates to: IHVAHASDARFLSCF*CPYVSNSPEGLSYF
Trigger: AAAGTAAGACAACCCTTCAGGACTGTTAGATACATAAGGACATCAGAAGCAAGAAAGGAACCTTGCATCTGATGCATGAGCTACGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493555.5
CDS CCA 90 bp CTCTATAGAACAGTTAATATACCATACCAGGTGAGGGAGAACTTCTaGTACTTCTTACCCTGGCATCATATTCAAGGACAAAAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: LYRTVNIPYQVRENF*YFLPWHHIQGQKEE
Trigger: TTCCTCCTTTTGTCCTTGAATATGATGCCAGGGTAAGAAGTACCAGAAGTTCTCCCTCACCTGGTATGGTATATTAACTGTTCTATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp GAGAGATCTCCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTGGGACAAACATGGAATGGGAACTTaGATTTGTCTTTTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: ERSPTETFIWRKCLSWDKHGMGT*ICLFPK
Trigger: TTTTGGGAAAAGACAAATCAAAGTTCCCATTCCATG...TTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAAAACCGGGCAGCTAGATaGAATCCTTTTGTCAATTTT +
Preference number: 5 (lower is better)
Translates to: SLLETDNPRGHPRTIESENRAAR*NPFVNF
Trigger: AAAATTGACAAAAGGATTCAATCTAGCTGCCCGGTT...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCACCTCTTTTAATGACCTaGGGAAGTAGAGAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSPLLMT*GSREVA
Trigger: TGCTACCTCTCTACTTCCCAAGGTCATTAAAAGAGG...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAACAGATCCTCAGATCTaGCTTGACATAACCAGCGAT +
Preference number: 5 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVETDPQI*LDITSD
Trigger: ATCGCTGGTTATGTCAAGCAAGATCTGAGGATCTGT...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTAAAAGAATGGGACCCTaGGAAGCACTGATCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIKRMGP*EALIWS
Trigger: GCTCCAGATCAGTGCTTCCAAGGGTCCCATTCTTTT...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCATCTACAGAAAATGGTTaGGGCCAGGTTCTTGAGGTA +
Preference number: 5 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSSTENG*GQVLEV
Trigger: TACCTCAAGAACCTGGCCCAAACCATTTTCTGTAGA...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCACTGACCACTAAATTGTaGCTTCTTAAACTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSLTTKL*LLKLGS
Trigger: GGACCCCAGTTTAAGAAGCAACAATTTAGTGGTCAG...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS TCA 90 bp AAGTCAGTAACCTGGGTTCAAGTCCAAATTCTGCATTTACTGTTGTaGGACTTTGGGCACATACTTCACCTTGCAGAATGTCAATATCTT +
Preference number: 5 (lower is better)
Translates to: KSVTWVQVQILHLLL*DFGHILHLAECQYL
Trigger: AAGATATTGACATTCTGCAAGGTGAAGTATGTGCCCAAAGTCTCACAACAGTAAATGCAGAATTTGGACTTGAACCCAGGTTACTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464026.1
CDS CCA 90 bp AACCTGGGTTCAAGTCCAAATTCTGCATTTACTGTTGTGAGACTTTaGGCACATACTTCACCTTGCAGAATGTCAATATCTTCCATCTTT +
Preference number: 5 (lower is better)
Translates to: NLGSSPNSAFTVVRL*AHTSPCRMSISSIF
Trigger: AAAGATGGAAGATATTGACATTCTGCAAGGTGAAGTATGTGCCCAAAGTCTCACAACAGTAAATGCAGAATTTGGACTTGAACCCAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464026.1
CDS-3UTR CAA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCATCTGTGAGACTTTCATaGCTGGTATTCACAATGGCT +
Preference number: 5 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSSVRLS*LVFTMA
Trigger: AGCCATTGTGAATACCAGCAATGAAAGTCTCACAGA...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAAGCCAACAGAAGACATaGACTGCTCTTTTGCTAGTT +
Preference number: 5 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSSQQKT*TALLLV
Trigger: AACTAGCAAAAGAGCAGTCAATGTCTTCTGTTGGCT...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCACCTCTTTTAATGACCTaGGGAAGTAGAGAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPPLLMT*GSREVA
Trigger: TGCTACCTCTCTACTTCCCAAGGTCATTAAAAGAGG...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAACCATGTTGACACCTTaGAACGAAATGTGGGATGTA +
Preference number: 5 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVETMLTP*NEMWDV
Trigger: TACATCCCACATTTCGTTCAAAGGTGTCAACATGGT...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp AGCTTGTTAGAAACTGATAATCCCAGAGGCCACCCCAGAACTATTGAATCTGAAATATCCTCAGCTGATTaGATACATGCACATGAAAGT +
Preference number: 5 (lower is better)
Translates to: SLLETDNPRGHPRTIESEISSAD*IHAHES
Trigger: ACTTTCATGTGCATGTATCAAATCAGCTGAGGATAT...TTCAGATTCAATAGTTCTGGGGTGGCCTCTGGGATTATCAGTTTCTAACAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCACTACTGACCACTAAATaGTTGCTTCTTAAACTGGGG +
Preference number: 5 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSLLTTK*LLLKLG
Trigger: CCCCAGTTTAAGAAGCAACAATTTAGTGGTCAGTAG...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCATAAAAGCATGCGCTTaGGAGTCAGATCTGGATTTG +
Preference number: 5 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTIKACA*ESDLDL
Trigger: CAAATCCAGATCTGACTCCAAAGCGCATGCTTTTAT...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCACATTGACTGCTCTTTaGCTAGTTGAAGTACGTTTC +
Preference number: 5 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTTLTAL*LVEVRF
Trigger: GAAACGTACTTCAACTAGCAAAAGAGCAGTCAATGT...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAGAAGTGCTATGTGTGTaGCATCCTCTAAAGGATAAC +
Preference number: 5 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPEVLCV*HPLKDN
Trigger: GTTATCCTTTAGAGGATGCAACACACATAGCACTTC...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAACCATGTTGACACCTTaGAACGAAATGTGGGATGTA +
Preference number: 5 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPTMLTP*NEMWDV
Trigger: TACATCCCACATTTCGTTCAAAGGTGTCAACATGGT...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAGAGAAAATGCCTCTCTaGGGACAAATCCTTTTCCTA +
Preference number: 5 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPEKMPL*GQILFL
Trigger: TAGGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTC...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCAATATGTGCGGTCCTTTaGAATAAGACCAAATCATCC +
Preference number: 5 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSICAVL*NKTKSS
Trigger: GGATGATTTGGTCTTATTCAAAAGGACCGCACATAT...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTGGTAAAAGTGGTCTTTaGCCAATTATCAGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIGKSGL*PIISSL
Trigger: CAGGGAGCTGATAATTGGCAAAAGACCACTTTTACC...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCACTTCATAGGCTATATTaGTATAGAGTGAGACCCTCT +
Preference number: 5 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSLHRLY*YRVRPS
Trigger: AGAGGGTCTCACTCTATACAAATATAGCCTATGAAG...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCATTCTGTCTCCTTTCCTaGAAAGAGAAAATCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSFCLLS*KEKIWK
Trigger: CTTCCAGATTTTCTCTTTCAAGGAAAGGAGACAGAA...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp TTTGTATTTGTATTGACTTCCCTGTTAAGGCCCAGTTCTACATTAGTGGTGGAAGTCCATGCAAAATCCTaGTGGAGTATATATGTGTTG +
Preference number: 5 (lower is better)
Translates to: FVFVLTSLLRPSSTLVVEVHAKS*WSIYVL
Trigger: CAACACATATATACTCCACAAGGATTTTGCATGGAC...TTCCACCACTAATGTAGAACTGGGCCTTAACAGGGAAGTCAATACAAATACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp ACAATCAATCCACTGCCACTAGAACCATGTAACTCTCCTCTATATAGTACTTCACATGGAATGGGAACTTaGATTTGTCTTTTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: TINPLPLEPCNSPLYSTSHGMGT*ICLFPK
Trigger: TTTTGGGAAAAGACAAATCAAAGTTCCCATTCCATG...TGAAGTACTATATAGAGGAGAGTTACATGGTTCTAGTGGCAGTGGATTGATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp AAATTGATGAAATTCACGAGTAGTCCTGTGACTAGTGCTTATGTAACAGATCCAACATTGACTGCTCTTTaGCTAGTTGAAGTACGTTTC +
Preference number: 5 (lower is better)
Translates to: KLMKFTSSPVTSAYVTDPTLTAL*LVEVRF
Trigger: GAAACGTACTTCAACTAGCAAAAGAGCAGTCAATGT...TGGATCTGTTACATAAGCACTAGTCACAGGACTACTCGTGAATTTCATCAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS-3UTR CAA 90 bp TTAACAAAGAAAAGTTGGCAGACTTTCATAGCTGCTCCTTGTGAAGAAGATACCAGAAATAAATGTGTTTaGTTACGCCACCCAGTTTAC +
Preference number: 5 (lower is better)
Translates to: LTKKSWQTFIAAPCEEDTRNKCV*LRHPVY
Trigger: GTAAACTGGGTGGCGTAACAAAACACATTTATTTCT...GGTATCTTCTTCACAAGGAGCAGCTATGAAAGTCTGCCAACTTTTCTTTGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTAGGTTTGTATTTGTATaGACTTCCCTGTTAAGGCCC +
Preference number: 5 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIRFVFV*TSLLRP
Trigger: GGGCCTTAACAGGGAAGTCAATACAAATACAAACCT...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS GCA 90 bp AATTCTGCATTTACTGTTGTGAGACTTTGGGCACATACTTCACCTTaGAGAATGTCAATATCTTCCATCTTTCAAACACAGATAATATCT +
Preference number: 5 (lower is better)
Translates to: NSAFTVVRLWAHTSP*RMSISSIFQTQIIS
Trigger: AGATATTATCTGTGTTTGAAAGATGGAAGATATTGACATTCTGCAAGGTGAAGTATGTGCCCAAAGTCTCACAACAGTAAATGCAGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464026.1
CDS-3UTR CAA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTTACATTTCCACATTCTaGGACTCAGGTAATTCTCTT +
Preference number: 5 (lower is better)
Translates to: RLNLFTKADWYTKCCLIIYISTF*DSGNSL
Trigger: AAGAGAATTACCTGAGTCCAAGAATGTGGAAATGTA...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS-3UTR CAA 90 bp AGGCTAAACCTTTTCACAAAGGCAGATTGGTATACCAAATGTTGCTTAATCATTAGTACATTATTCAGTTaGAGAAAACTGGTCTACACG +
Preference number: 5 (lower is better)
Translates to: RLNLFTKADWYTKCCLIISTLFS*RKLVYT
Trigger: CGTGTAGACCAGTTTTCTCAAACTGAATAATGTACT...AATGATTAAGCAACATTTGGTATACCAATCTGCCTTTGTGAAAAGGTTTAGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS TCA 72 bp CCGAGTACGGCGAGTCAAAGTCCCAGGAGACTGGAGTaGCCAGCTGCAAATGCTCTGGGCTGCGAAACACCG +
Preference number: 6 (lower is better)
Translates to: PSTASQSPRRLE*PAANALGCETP
Trigger: CGGTGTTTCGCAGCCCAGAGCATTTGCAGCTGGTCACTCCAGTCTCCTGGGACTTTGACTCGCCGTACTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369443.10
CDS TCA 72 bp CGTGGAGGAAGTGGCATCCTGGGAACCAAGAAGCACTaGAAGATGGCAGGTCACAAATCTGGTGATGGGGGA +
Preference number: 6 (lower is better)
Translates to: RGGSGILGTKKH*KMAGHKSGDGG
Trigger: TCCCCCATCACCAGATTTGTGACCTGCCATCTTTCAGTGCTTCTTGGTTCCCAGGATGCCACTTCCTCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369443.10
ENST00000491626.5
CDS CCA 72 bp GAAGTGGCATCCTGGGAACCAAGAAGCACTGAAAGATaGCAGGTCACAAATCTGGTGATGGGGGATATGATG +
Preference number: 6 (lower is better)
Translates to: EVASWEPRSTER*QVTNLVMGDMM
Trigger: CATCATATCCCCCATCACCAGATTTGTGACCTGCCATCTTTCAGTGCTTCTTGGTTCCCAGGATGCCACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369443.10
ENST00000491626.5
CDS CCA 72 bp CTGGATTCCAGAACCCCAGGCACAGCTTTAAGTTTCTaGAGATCTTCCTTCAAATCAGGCCCTGCAAGCATG +
Preference number: 6 (lower is better)
Translates to: LDSRTPGTALSF*RSSFKSGPASM
Trigger: CATGCTTGCAGGGCCTGATTTGAAGGAAGATCTCCAGAAACTTAAAGCTGTGCCTGGGGTTCTGGAATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494224.1
CDS CCA 72 bp GCACCCACCAGAGCAGCAGGGAAGAAGTTTATTCTCTaGAGATGCTCAACTAGAGAGTTTCTGGATTCCAGA +
Preference number: 6 (lower is better)
Translates to: APTRAAGKKFIL*RCSTREFLDSR
Trigger: TCTGGAATCCAGAAACTCTCTAGTTGAGCATCTCCAGAGAATAAACTTCTTCCCTGCTGCTCTGGTGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494224.1
CDS CAA 90 bp CTGCAGGTAGGTAGGGCAATGATCGATTCTCCTCTTTTAATGACCTaGGGAAGTAGAGAGGTAGCAGCTTTTGGTAAGTACCCTCTTCAA +
Preference number: 6 (lower is better)
Translates to: LQVGRAMIDSPLLMT*GSREVAAFGKYPLQ
Trigger: TTGAAGAGGGTACTTACCAAAAGCTGCTACCTCTCTACTTCCCAAGGTCATTAAAAGAGGAGAATCGATCATTGCCCTACCTACCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000493555.5
CDS TCA 72 bp ATAGTAAGGCCCGTTTTCAGCAGAGAGATCTCCCACTaGAACGTTTATCTGGAGAAAATGCCTCTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: IVRPVFSREISH*NVYLEKMPLLG
Trigger: TCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGGAGATCTCTCTGCTGAAAACGGGCCTTACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491626.5
CDS GCA 72 bp TACGTTTCTGTAGCAGCTATAAAGGGAACTCTCAGCTaGTGTGCGATAGCGGCTTTTATATTTAGGTCCCAC +
Preference number: 6 (lower is better)
Translates to: YVSVAAIKGTLS*CAIAAFIFRSH
Trigger: GTGGGACCTAAATATAAAAGCCGCTATCGCACAGCAGCTGAGAGTTCCCTTTATAGCTGCTACAGAAACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000493555.5
ENST00000494224.1
CDS TCA 72 bp TGCTGCTTCTGCAGAGCTGCCTCTGATAATTGTCCCTaGAGGATCAGTTTTCTTTGCTTGTCAATATCTCCT +
Preference number: 6 (lower is better)
Translates to: CCFCRAASDNCP*RISFLCLSISP
Trigger: AGGAGATATTGACAAGCAAAGAAAACTGATCCTTCAGGGACAATTATCAGAGGCAGCTCTGCAGAAGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000464026.1
ENST00000493555.5
CDS TCA 72 bp TGCTGCTCTATAGAACAGTTAATATACCATACCAGGTaGGGGAGAACTTCTGGTACTTCTTACCCTGGCATC +
Preference number: 6 (lower is better)
Translates to: CCSIEQLIYHTR*GRTSGTSYPGI
Trigger: GATGCCAGGGTAAGAAGTACCAGAAGTTCTCCCTCACCTGGTATGGTATATTAACTGTTCTATAGAGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS TCA 72 bp GCTCATGCATCAGATGCAAGGTTCCTTTCTTGCTTCTaGTGTCCTTATGTATCTAACAGTCCTGAAGGGTTG +
Preference number: 6 (lower is better)
Translates to: AHASDARFLSCF*CPYVSNSPEGL
Trigger: CAACCCTTCAGGACTGTTAGATACATAAGGACATCAGAAGCAAGAAAGGAACCTTGCATCTGATGCATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493555.5
CDS CCA 72 bp TACCAGGTGAGGGAGAACTTCTGGTACTTCTTACCCTaGCATCATATTCAAGGACAAAAGGAGGAAAGTCAA +
Preference number: 6 (lower is better)
Translates to: YQVRENFWYFLP*HHIQGQKEESQ
Trigger: TTGACTTTCCTCCTTTTGTCCTTGAATATGATGCCAGGGTAAGAAGTACCAGAAGTTCTCCCTCACCTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS CCA 72 bp CCCACTGAAACGTTTATCTGGAGAAAATGCCTCTCTTaGGACAAATCCTTTTCCCTGGCATCATATTCAAGG +
Preference number: 6 (lower is better)
Translates to: PTETFIWRKCLS*DKSFSLASYSR
Trigger: CCTTGAATATGATGCCAGGGAAAAGGATTTGTCCCAAGAGAGGCATTTTCTCCAGATAAACGTTTCAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491626.5
CDS CAA 90 bp ACTGGGAAGGTGCACCTAAGGGATCCATGGAATGGGAACTTTGATTaGTCTTTTCCCAAAATCCTCAGCAATTCAATATTCACTGGAGAC +
Preference number: 6 (lower is better)
Translates to: TGKVHLRDPWNGNFD*SFPKILSNSIFTGD
Trigger: GTCTCCAGTGAATATTGAATTGCTGAGGATTTTGGGAAAAGACAAATCAAAGTTCCCATTCCATGGATCCCTTAGGTGCACCTTCCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000494224.1
CDS TCA 72 bp GAAGGTGCACCTAAGGGATCCATGGAATGGGAACTTTaGTTTGTCTTTTCCCAAAATCCTCAGCAATTCAAT +
Preference number: 6 (lower is better)
Translates to: EGAPKGSMEWEL*FVFSQNPQQFN
Trigger: ATTGAATTGCTGAGGATTTTGGGAAAAGACAAATCAAAGTTCCCATTCCATGGATCCCTTAGGTGCACCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000494224.1
CDS TCA 72 bp CTTCAAATCAGGCCCTGCAAGCATGAAGATACTTTCTaGCACAGGATTCTTATCTGTGAGACTTTCATTGCT +
Preference number: 6 (lower is better)
Translates to: LQIRPCKHEDTF*HRILICETFIA
Trigger: AGCAATGAAAGTCTCACAGATAAGAATCCTGTGTCAGAAAGTATCTTCATGCTTGCAGGGCCTGATTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000493555.5
ENST00000494224.1
CDS CCA 72 bp ATTTCAGCTGTAGTATCAGAGGAATTTAATTCATCTTaGCATGAGTCACCCCAGCTTGGTAGTGTATCCACA +
Preference number: 6 (lower is better)
Translates to: ISAVVSEEFNSS*HESPQLGSVST
Trigger: TGTGGATACACTACCAAGCTGGGGTGACTCATGCCAAGATGAATTAAATTCCTCTGATACTACAGCTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000494224.1
CDS CCA 72 bp ACAGTTAATATACCATACCAGGTGAGGGAGAACTTCTaGTACTTCTTACCCTGGCATCATATTCAAGGACAA +
Preference number: 6 (lower is better)
Translates to: TVNIPYQVRENF*YFLPWHHIQGQ
Trigger: TTGTCCTTGAATATGATGCCAGGGTAAGAAGTACCAGAAGTTCTCCCTCACCTGGTATGGTATATTAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369442.3
CDS CAA 72 bp GTGCACCTAAGGGATCCATGGAATGGGAACTTTGATTaGTCTTTTCCCAAAATCCTCAGCAATTCAATATTC +
Preference number: 6 (lower is better)
Translates to: VHLRDPWNGNFD*SFPKILSNSIF
Trigger: GAATATTGAATTGCTGAGGATTTTGGGAAAAGACAAATCAAAGTTCCCATTCCATGGATCCCTTAGGTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000494224.1
CDS CAA 72 bp ACTGTGGCCACTGATAACTTTCTTAACTTTGAGTTTTaGCACCTCCAAAATGAGGACGATATCTTCCTCACT +
Preference number: 6 (lower is better)
Translates to: TVATDNFLNFEF*HLQNEDDIFLT
Trigger: AGTGAGGAAGATATCGTCCTCATTTTGGAGGTGCAAAAACTCAAAGTTAAGAAAGTTATCAGTGGCCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493555.5
CDS CAA 90 bp ATGAAGATACTTTCTGACACAGGATTCTTATCTGTGAGACTTTCATaGCTGGTATTCACAATGGCTGTACAGTTCAGTAATGCCACATCT +
Preference number: 6 (lower is better)
Translates to: MKILSDTGFLSVRLS*LVFTMAVQFSNATS
Trigger: AGATGTGGCATTACTGAACTGTACAGCCATTGTGAATACCAGCAATGAAAGTCTCACAGATAAGAATCCTGTGTCAGAAAGTATCTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000493555.5
ENST00000494224.1
CDS GCA 72 bp GAATGCATTATATATACACGTAGCTCATGCATCAGATaGAAGGTTCCTTTCTTGCTTCTGATGTCCTTATGT +
Preference number: 6 (lower is better)
Translates to: ECIIYTRSSCIR*KVPFLLLMSLC
Trigger: ACATAAGGACATCAGAAGCAAGAAAGGAACCTTGCATCTGATGCATGAGCTACGTGTATATATAATGCATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493555.5
CDS CCA 72 bp TCAAGTCCAAATTCTGCATTTACTGTTGTGAGACTTTaGGCACATACTTCACCTTGCAGAATGTCAATATCT +
Preference number: 6 (lower is better)
Translates to: SSPNSAFTVVRL*AHTSPCRMSIS
Trigger: AGATATTGACATTCTGCAAGGTGAAGTATGTGCCCAAAGTCTCACAACAGTAAATGCAGAATTTGGACTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464026.1
CDS CAA 72 bp TTCAAGTCCAAATTCTGCATTTACTGTTGTGAGACTTaGGGCACATACTTCACCTTGCAGAATGTCAATATC +
Preference number: 6 (lower is better)
Translates to: FKSKFCIYCCET*GTYFTLQNVNI
Trigger: GATATTGACATTCTGCAAGGTGAAGTATGTGCCCAAAGTCTCACAACAGTAAATGCAGAATTTGGACTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464026.1
CDS CAA 90 bp GGTATAAGGCTTTTAGAGAAGCAATATCAGACAGATCCTCAGATCTaGCTTGACATAACCAGCGATTATAATTTCTTTGATGCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: GIRLLEKQYQTDPQI*LDITSDYNFFDAAS
Trigger: AGAAGCAGCATCAAAGAAATTATAATCGCTGGTTATGTCAAGCAAGATCTGAGGATCTGTCTGATATTGCTTCTCTAAAAGCCTTATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000464026.1
CDS CAA 90 bp CACATATTAACTGTGGCCACTGATAACTTTCTTAACTTTGAGTTTTaGCACCTCCAAAATGAGGACGATATCTTCCTCACTGATTGTCAT +
Preference number: 6 (lower is better)
Translates to: HILTVATDNFLNFEF*HLQNEDDIFLTDCH
Trigger: ATGACAATCAGTGAGGAAGATATCGTCCTCATTTTGGAGGTGCAAAAACTCAAAGTTAAGAAAGTTATCAGTGGCCACAGTTAATATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493555.5
CDS CAA 72 bp ATTTACTGTTGTGAGACTTTGGGCACATACTTCACCTaGCAGAATGTCAATATCTTCCATCTTTCAAACACA +
Preference number: 6 (lower is better)
Translates to: IYCCETLGTYFT*QNVNIFHLSNT
Trigger: TGTGTTTGAAAGATGGAAGATATTGACATTCTGCAAGGTGAAGTATGTGCCCAAAGTCTCACAACAGTAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464026.1
CDS CAA 90 bp AAATTCTGCATTTACTGTTGTGAGACTTTGGGCACATACTTCACCTaGCAGAATGTCAATATCTTCCATCTTTCAAACACAGATAATATC +
Preference number: 6 (lower is better)
Translates to: KFCIYCCETLGTYFT*QNVNIFHLSNTDNI
Trigger: GATATTATCTGTGTTTGAAAGATGGAAGATATTGACATTCTGCAAGGTGAAGTATGTGCCCAAAGTCTCACAACAGTAAATGCAGAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464026.1
CDS CAA 72 bp CTTTTAGAGAAGCAATATCAGACAGATCCTCAGATCTaGCTTGACATAACCAGCGATTATAATTTCTTTGAT +
Preference number: 6 (lower is better)
Translates to: LLEKQYQTDPQI*LDITSDYNFFD
Trigger: ATCAAAGAAATTATAATCGCTGGTTATGTCAAGCAAGATCTGAGGATCTGTCTGATATTGCTTCTCTAAAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369442.3
ENST00000369443.10
ENST00000464026.1