RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GDAP1L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124194

Ensembl transcript IDs: ENST00000342560.10, ENST00000372952.7, ENST00000438466.5, ENST00000445952.2, ENST00000447658.1, ENST00000537864.5, ENST00000612599.4, ENST00000617075.4

Found 737 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTGCAGGCTaGCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCG +
Preference number: 1 (lower is better)
Translates to: RPAAPGTAAPVRAAG*PPRASGPPRALWAP
Trigger: CGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR GCA 90 bp GGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTaGAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTG +
Preference number: 1 (lower is better)
Translates to: GSASSSSRYCSTRAC*RLPTSGIRATTCSV
Trigger: CACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR GCA 90 bp ATGGGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTaGTGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCT +
Preference number: 1 (lower is better)
Translates to: MGSASSSSRYCSTRA*CRLPTSGIRATTCS
Trigger: AGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR CCA 90 bp TCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATaGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAG +
Preference number: 1 (lower is better)
Translates to: SRRSVKPLLIFRDLP*GLRLSSPIQRYRLE
Trigger: CTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR CCA 90 bp GAGAGGGTGTGCTCATGGTATCCGTCCCCACTGCAGCCTGGTTTTTaGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAG +
Preference number: 1 (lower is better)
Translates to: ERVCSWYPSPLQPGF*VPLPWLKLVHVQEK
Trigger: CTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGCTGCAGTGGGGACGGATACCATGAGCACACCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 90 bp GTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCTTCTaGGAGAGGGTCAACATGGCTTTTACTGAAAGTCCCACCTCACAG +
Preference number: 1 (lower is better)
Translates to: VHLQIRPCTWAGLTF*ERVNMAFTESPTSQ
Trigger: CTGTGAGGTGGGACTTTCAGTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 90 bp AAGGGCGGGGAGGGCTGTCCAAGTGTTCATGAGACAGTGAGTTACTaGGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCA +
Preference number: 1 (lower is better)
Translates to: KGGEGCPSVHETVSY*ELTGNHTAQRHRQS
Trigger: TGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTCACTGTCTCATGAACACTTGGACAGCCCTCCCCGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 90 bp TCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTTCATGAGACAGTaGGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACC +
Preference number: 1 (lower is better)
Translates to: SERRAGRAVQVFMRQ*VTESSRGITQHRDT
Trigger: GGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTCACTGTCTCATGAACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 90 bp GTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGAGTCTTaGTGTCGGCTTTGTCCTGTGGAAGAGTTCCCTGGGCAAGAGGGA +
Preference number: 1 (lower is better)
Translates to: VIQPHSEVPVRGVES*CRLCPVEEFPGQEG
Trigger: TCCCTCTTGCCCAGGGAACTCTTCCACAGGACAAAGCCGACATCAAGACTCAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 90 bp AGCCCTGGAAAGTCAGTCTGGAAGCCAGCCCCAGACCCAGCAACTTaGGACAGGCAGTCAACTCTTGCTTGCTCTTGTGAAGAACTGAGA +
Preference number: 1 (lower is better)
Translates to: SPGKSVWKPAPDPAT*DRQSTLACSCEELR
Trigger: TCTCAGTTCTTCACAAGAGCAAGCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACTGACTTTCCAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 90 bp ATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTTCATaGGACAGTGAGTTACTGAGAGCTCACGGGGAATCACACAGCACA +
Preference number: 1 (lower is better)
Translates to: IITQNEGRGGLSKCS*DSELLRAHGESHST
Trigger: TGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTCACTGTCTCATGAACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 90 bp TCTACTAAGGCCAAACCCAACACATGGACCAAATCAGAAGGACAATaGGAGGGTGTGCTCATGGTATCCGTCCCCACTGCAGCCTGGTTT +
Preference number: 1 (lower is better)
Translates to: STKAKPNTWTKSEGQ*EGVLMVSVPTAAWF
Trigger: AAACCAGGCTGCAGTGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATGTGTTGGGTTTGGCCTTAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 90 bp CAGCATTGGCAACGTCTACTTCTAAACTACGGAATGTTTTCACACTaGCGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAA +
Preference number: 1 (lower is better)
Translates to: QHWQRLLLNYGMFSH*RYYYSERRAGRAVQ
Trigger: TTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTGAAAACATTCCGTAGTTTAGAAGTAGACGTTGCCAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 90 bp CTCTCTCTCTCGCTTCCTCTCTCTCTTTTAGTAGAGCCGTGGCCTTaGGTCACAGCATTGGCAACGTCTACTTCTAAACTACGGAATGTT +
Preference number: 1 (lower is better)
Translates to: LSLSLPLSLLVEPWP*VTALATSTSKLRNV
Trigger: AACATTCCGTAGTTTAGAAGTAGACGTTGCCAATGCTGTGACTCAAGGCCACGGCTCTACTAAAAGAGAGAGAGGAAGCGAGAGAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR GCA 90 bp AACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATaGATGAGCGGCAGTGACACCAAGACCCTTTCCCAACATGCAAAA +
Preference number: 1 (lower is better)
Translates to: NCSSWMLYWGFWWFL*MSGSDTKTLSQHAK
Trigger: TTTTGCATGTTGGGAAAGGGTCTTGGTGTCACTGCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp CTGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGCCCCCATGCTCGGGCTTaGCTGCTGGCGGACAGGGGA +
Preference number: 2 (lower is better)
Translates to: LQAAHLGHQGHHVLCGHRPHARA*LLADRG
Trigger: TCCCCTGTCCGCCAGCAGCCAAGCCCGAGCATGGGG...GCGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR-3UTR GCA 90 bp CGTGCGTGCTGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGCCCCAAGATGTCTCTaGCCAGAGGCCCTGGGCACC +
Preference number: 2 (lower is better)
Translates to: RACCRLPTSGIRATTCSVAPRCL*PEALGT
Trigger: GGTGCCCAGGGCCTCTGGGCAGAGACATCTTGGGGC...CACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR-3UTR GCA 90 bp TGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGCCATGCTCGGGCTTGGCTaGTGGCGGACAGGGGATTCT +
Preference number: 2 (lower is better)
Translates to: CRLPTSGIRATTCSVGTAMLGLG*WRTGDS
Trigger: AGAATCCCCTGTCCGCCAGCAGCCAAGCCCGAGCAT...GGCGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR-3UTR CCA 90 bp TGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGCCCTCGGGCTTGGCTGCTaGCGGACAGGGGATTCTAGT +
Preference number: 2 (lower is better)
Translates to: CRLPTSGIRATTCSVGTALGLGC*RTGDSS
Trigger: ACTAGAATCCCCTGTCCGCCAGCAGCCAAGCCCGAG...GGCGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR CAA 90 bp CAAGATGTCTCTGCCCAGAGGCCCTGGGCACCCCCATGCTCGGGCTaGGCTGCTGGCGGACAGGGGATTCTAGTGGTGGCCCGGCCATCT +
Preference number: 2 (lower is better)
Translates to: QDVSAQRPWAPPCSG*AAGGQGILVVARPS
Trigger: AGATGGCCGGGCCACCACTAGAATCCCCTGTCCGCCAGCAGCCAAGCCCGAGCATGGGGGTGCCCAGGGCCTCTGGGCAGAGACATCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR-3UTR TCA 90 bp AGGCATCCATGGGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTTGCCCCCGGCATCCCTaGGCCCCAAGATGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: RHPWAVRPAAPGTAAPVRCPRHP*APRCLC
Trigger: GCAGAGACATCTTGGGGCTCAGGGATGCCGGGGGCA...ACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCCCATGGATGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR-3UTR TCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCGTAGAGCCGTGGCCTTaGGTCACAGCATTGGCAACG +
Preference number: 2 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTVEPWP*VTALAT
Trigger: CGTTGCCAATGCTGTGACTCAAGGCCACGGCTCTAC...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGAGTAGAGCCGTGGCCTTaGGTCACAGCATTGGCAACG +
Preference number: 2 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRVEPWP*VTALAT
Trigger: CGTTGCCAATGCTGTGACTCAAGGCCACGGCTCTAC...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCGTGTTCATGAGACAGTaGGTTACTGAGAGCTCACGG +
Preference number: 2 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTVFMRQ*VTESSR
Trigger: CCGTGAGCTCTCAGTAACTCACTGTCTCATGAACAC...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCAGAGGAGTTGAGTCTTaGTGTCGGCTTTGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTRGVES*CRLCPV
Trigger: CACAGGACAAAGCCGACATCAAGACTCAACTCCTCT...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCAAAGGCACAGGAAAGTaGGACCCGACTGGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCKGTGK*DPTGVG
Trigger: ACCCACCCCAGTCGGGTCTCACTTTCCTGTGCCTTT...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp TCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGCCAGAATCTGGGCCCTaGTGGACGAAACATCCTGGG +
Preference number: 2 (lower is better)
Translates to: SDLQGPPMGSPVIQPHSEPESGP*WTKHPG
Trigger: CCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGG...CTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp CCCCTGCACTTGGGCTGGACTGACCTTCTGAGAGAGGGTCAACATGGCTTTTACGCACCTCCCAGAATCTaGGCCCTGGTGGACGAAACA +
Preference number: 2 (lower is better)
Translates to: PLHLGWTDLLREGQHGFYAPPRI*ALVDET
Trigger: TGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTGC...GTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR CAA 90 bp GGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTaGAGTCTTGATGTCGGCTTTGTCCTGTGGAAGAGTTCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: GLRLSSPIQRYRLEE*SLDVGFVLWKSSLG
Trigger: GCCCAGGGAACTCTTCCACAGGACAAAGCCGACATCAAGACTCAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR GCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCCTCCAGATCCGCCCCTaGACTTGGGCTGGACTGACC +
Preference number: 2 (lower is better)
Translates to: LALAQVNENKGLYTCPVTLQIRP*TWAGLT
Trigger: GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAG...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCGCCAAACCCAACACATaGACCAAATCAGAAGGACAA +
Preference number: 2 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTAKPNT*TKSEGQ
Trigger: TTGTCCTTCTGATTTGGTCCATGTGTTGGGTTTGGC...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTCTCTCCCCGGCTCCATaGCACCGTGTAGTACAGGGA +
Preference number: 2 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGLSPAP*HRVVQG
Trigger: TCCCTGTACTACACGGTGCCATGGAGCCGGGGAGAG...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp CCCCTGCACTTGGGCTGGACTGACCTTCTGAGAGAGGGTCAACATGGCTTTTACGAGACAGTGAGTTACTaGGAGCTCACGGGGAATCAC +
Preference number: 2 (lower is better)
Translates to: PLHLGWTDLLREGQHGFYETVSY*ELTGNH
Trigger: GTGATTCCCCGTGAGCTCTCAGTAACTCACTGTCTC...GTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR GCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGGGTATCCGTCCCCACTaGAGCCTGGTTTTTGGGTGC +
Preference number: 2 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQGIRPH*SLVFGC
Trigger: GCACCCAAAAACCAGGCTGCAGTGGGGACGGATACC...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCGTCCCCACTGCAGCCTaGTTTTTGGGTGCCACTGCC +
Preference number: 2 (lower is better)
Translates to: LALAQVNENKGLYTCPVTVPTAA*FLGATA
Trigger: GGCAGTGGCACCCAAAAACCAGGCTGCAGTGGGGAC...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCCTCTCCCCGGCTCCATaGCACCGTGTAGTACAGGGA +
Preference number: 2 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGLSPAP*HRVVQG
Trigger: TCCCTGTACTACACGGTGCCATGGAGCCGGGGAGAG...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGGTCGGCTTTGTCCTGTaGAAGAGTTCCCTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQVGFVL*KSSLGK
Trigger: CTTGCCCAGGGAACTCTTCCACAGGACAAAGCCGAC...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTTGGGTGCCACTGCCTTaGCTCAAGCTAGTCCATGTC +
Preference number: 2 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGWVPLP*LKLVHV
Trigger: GACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCTATTGGGGCTTTTGGTaGTTTCTATGCATGAGCGGC +
Preference number: 2 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCYWGFW*FLCMSG
Trigger: GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATA...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTAAGGTAGGAAGAGGATaGTGGCTGCTGCCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGKVGRG*WLLPSE
Trigger: CTCTGAAGGCAGCAGCCATCATCCTCTTCCTACCTT...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCGCTGGACTGACCTTCTaGGAGAGGGTCAACATGGCT +
Preference number: 2 (lower is better)
Translates to: LALAQVNENKGLYTCPVTAGLTF*ERVNMA
Trigger: AGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGC...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTAAAGGCACAGGAAAGTaGGACCCGACTGGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCKGTGK*DPTGVG
Trigger: ACCCACCCCAGTCGGGTCTCACTTTCCTGTGCCTTT...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTGTGGACGAAACATCCTaGGACTCACCTCAGATCCTA +
Preference number: 2 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPVDETS*DSPQIL
Trigger: TAGGATCTGAGGTGAGTCCCAGGATGTTTCGTCCAC...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCGTCGGCTTTGTCCTGTaGAAGAGTTCCCTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGVGFVL*KSSLGK
Trigger: CTTGCCCAGGGAACTCTTCCACAGGACAAAGCCGAC...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTCCCCTGCACTTGGGCTaGACTGACCTTCTGAGAGAG +
Preference number: 2 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCPLHLG*TDLLRE
Trigger: CTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCTCTCCCCGGCTCCATaGCACCGTGTAGTACAGGGA +
Preference number: 2 (lower is better)
Translates to: QLFLLDALLGLLVVSMHELSPAP*HRVVQG
Trigger: TCCCTGTACTACACGGTGCCATGGAGCCGGGGAGAG...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCAAGGTAGGAAGAGGATaGTGGCTGCTGCCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: LALAQVNENKGLYTCPVTKVGRG*WLLPSE
Trigger: CTCTGAAGGCAGCAGCCATCATCCTCTTCCTACCTT...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTTCCAGCACTTGGCAATaGGAACTAGATGGACAGCAC +
Preference number: 2 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGSSTWQ*ELDGQH
Trigger: GTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGA...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR GCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGGGTATCCGTCCCCACTaGAGCCTGGTTTTTGGGTGC +
Preference number: 2 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEGIRPH*SLVFGC
Trigger: GCACCCAAAAACCAGGCTGCAGTGGGGACGGATACC...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp TCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGCTTGAGTCACAGCATTaGCAACGTCTACTTCTAAAC +
Preference number: 2 (lower is better)
Translates to: SDLQGPPMGSPVIQPHSELESQH*QRLLLN
Trigger: GTTTAGAAGTAGACGTTGCCAATGCTGTGACTCAAG...CTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGGTGGACGAAACATCCTaGGACTCACCTCAGATCCTA +
Preference number: 2 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQVDETS*DSPQIL
Trigger: TAGGATCTGAGGTGAGTCCCAGGATGTTTCGTCCAC...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGTTCAGGGACCTCCCATaGGGTCTCCGGTTATCCAGC +
Preference number: 2 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEFRDLP*GLRLSS
Trigger: GCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAA...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGGAGAGGGTGTGCTCATaGTATCCGTCCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEERVCS*YPSPLQ
Trigger: CTGCAGTGGGGACGGATACCATGAGCACACCCTCTC...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCTGTCCAAGTGTTCATaGGACAGTGAGTTACTGAGA +
Preference number: 2 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPLSKCS*DSELLR
Trigger: TCTCAGTAACTCACTGTCTCATGAACACTTGGACAG...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp TCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGTCCATCTTGAGACCTTaGATCGATAGAAAAGGCATT +
Preference number: 2 (lower is better)
Translates to: SDLQGPPMGSPVIQPHSESILRP*IDRKGI
Trigger: AATGCCTTTTCTATCGATTCAAGGTCTCAAGATGGA...CTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTGGTGGTTTCTATGCATaGGCGGCAGTGACACCAAGA +
Preference number: 2 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCGGFYA*AAVTPR
Trigger: TCTTGGTGTCACTGCCGCTCATGCATAGAAACCACC...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR GCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTGACAATGAGAGGGTGTaGTCATGGTATCCGTCCCCA +
Preference number: 2 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCDNERV*SWYPSP
Trigger: TGGGGACGGATACCATGAGCACACCCTCTCATTGTC...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR GCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGGACCCTTTCCCAACATaGAAAAGGCACAGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQDPFPT*KRHRKV
Trigger: CACTTTCCTGTGCCTTTTGCATGTTGGGAAAGGGTC...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp CCCCTGCACTTGGGCTGGACTGACCTTCTGAGAGAGGGTCAACATGGCTTTTACTCCATCTTGAGACCTTaGATCGATAGAAAAGGCATT +
Preference number: 2 (lower is better)
Translates to: PLHLGWTDLLREGQHGFYSILRP*IDRKGI
Trigger: AATGCCTTTTCTATCGATTCAAGGTCTCAAGATGGA...GTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTTCCACAGTTCCATCTTaGGACCTTGAATCGATAGAA +
Preference number: 2 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPSTVPS*DLESIE
Trigger: TTCTATCGATTCAAGGTCTCAAGATGGAACTGTGGA...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTAGAGGAGTTGAGTCTTaGTGTCGGCTTTGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCRGVES*CRLCPV
Trigger: CACAGGACAAAGCCGACATCAAGACTCAACTCCTCT...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGGAGAGAGGGTCAACATaGCTTTTACTGAAAGTCCCA +
Preference number: 2 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQERGST*LLLKVP
Trigger: TGGGACTTTCAGTAAAAGCCATGTTGACCCTCTCTC...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCCTGTCCAAGTGTTCATaGGACAGTGAGTTACTGAGA +
Preference number: 2 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGLSKCS*DSELLR
Trigger: TCTCAGTAACTCACTGTCTCATGAACACTTGGACAG...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTTCCACAGTTCCATCTTaGGACCTTGAATCGATAGAA +
Preference number: 2 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGSTVPS*DLESIE
Trigger: TTCTATCGATTCAAGGTCTCAAGATGGAACTGTGGA...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR GCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTTTTTGGTGGTTTCTATaGATGAGCGGCAGTGACACC +
Preference number: 2 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCFWWFL*MSGSDT
Trigger: GGTGTCACTGCCGCTCATGCATAGAAACCACCAAAA...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGCTTGAGTCACAGCATTaGCAACGTCTACTTCTAAAC +
Preference number: 2 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQLESQH*QRLLLN
Trigger: GTTTAGAAGTAGACGTTGCCAATGCTGTGACTCAAG...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGAAATCAGAAGGACAATaGGAGGGTGTGCTCATGGTA +
Preference number: 2 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEKSEGQ*EGVLMV
Trigger: TACCATGAGCACACCCTCTCATTGTCCTTCTGATTT...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR GCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGGAGGATGATGGCTGCTaGCTTCAGAGATTTCTACTA +
Preference number: 2 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEEDDGC*LQRFLL
Trigger: TAGTAGAAATCTCTGAAGGCAGCAGCCATCATCCTC...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTCTTGAGTCACAGCATTaGCAACGTCTACTTCTAAAC +
Preference number: 2 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCLESQH*QRLLLN
Trigger: GTTTAGAAGTAGACGTTGCCAATGCTGTGACTCAAG...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR TCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCGGAATGTTTTCACACTaGCGGTATTATTACTCAGAA +
Preference number: 2 (lower is better)
Translates to: LALAQVNENKGLYTCPVTGMFSH*RYYYSE
Trigger: TTCTGAGTAATAATACCGTCAGTGTGAAAACATTCC...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR GCA 72 bp GCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTaGTGCAGGCTGCCCACCTCGGGCATCAGGGCCACC +
Preference number: 3 (lower is better)
Translates to: ASSSSRYCSTRA*CRLPTSGIRAT
Trigger: GGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR GCA 72 bp GCTCCCGGTACTGCAGCACCCGTGCGTGCTGCAGGCTaGCCACCTCGGGCATCAGGGCCACCACGTGCTCTG +
Preference number: 3 (lower is better)
Translates to: APGTAAPVRAAG*PPRASGPPRAL
Trigger: CAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR GCA 72 bp TCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTaGAGGCTGCCCACCTCGGGCATCAGGGCCACCACG +
Preference number: 3 (lower is better)
Translates to: SSSSRYCSTRAC*RLPTSGIRATT
Trigger: CGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR GCA 72 bp GCATCCATGGGCAGTGCGTCCAGCAGCTCCCGGTACTaGAGCACCCGTGCGTGCTGCAGGCTGCCCACCTCG +
Preference number: 3 (lower is better)
Translates to: ASMGSASSSSRY*STRACCRLPTS
Trigger: CGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCCCATGGATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
3UTR CCA 72 bp CCTCTGAGTCCCCAGCACCTCCCAGAATCTGGGCCCTaGTGGACGAAACATCCTGGGACTCACCTCAGATCC +
Preference number: 3 (lower is better)
Translates to: PLSPQHLPESGP*WTKHPGTHLRS
Trigger: GGATCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTGCTGGGGACTCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCGATCCGCCCCTGCACTaGGGCTGGACTGACCTTCTG +
Preference number: 3 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCDPPLH*GWTDLL
Trigger: CAGAAGGTCAGTCCAGCCCAAGTGCAGGGGCGGATC...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR CCA 72 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATaGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTAC +
Preference number: 3 (lower is better)
Translates to: SVKPLLIFRDLP*GLRLSSPIQRY
Trigger: GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR CCA 72 bp GAGGGTGTGCTCATGGTATCCGTCCCCACTGCAGCCTaGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGT +
Preference number: 3 (lower is better)
Translates to: EGVLMVSVPTAA*FLGATALAQAS
Trigger: ACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGCTGCAGTGGGGACGGATACCATGAGCACACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGAGTAGAGCCGTGGCCTaGAGTCACAGCATTGGCAAC +
Preference number: 3 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELSRAVA*SHSIGN
Trigger: GTTGCCAATGCTGTGACTCAAGGCCACGGCTCTACT...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTCTTGATGTCGGCTTaGTCCTGTGGAAGAGTTCCC +
Preference number: 3 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGVLMSA*SCGRVP
Trigger: GGGAACTCTTCCACAGGACAAAGCCGACATCAAGAC...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTGAGGGGGACCTAGGTTaGTCCACCTCCAGATCCGCC +
Preference number: 3 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGEGDLG*STSRSA
Trigger: GGCGGATCTGGAGGTGGACAAACCTAGGTCCCCCTC...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp AGGGCGGGGAGGGCTGTCCAAGTGTTCATGAGACAGTaGGTTACTGAGAGCTCACGGGGAATCACACAGCAC +
Preference number: 3 (lower is better)
Translates to: RAGRAVQVFMRQ*VTESSRGITQH
Trigger: GTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTCACTGTCTCATGAACACTTGGACAGCCCTCCCCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR GCA 72 bp ACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCACTaGAGCCTGGTTTTTGGGTGCCACTGCCTTGGCTCA +
Preference number: 3 (lower is better)
Translates to: TMRGCAHGIRPH*SLVFGCHCLGS
Trigger: TGAGCCAAGGCAGTGGCACCCAAAAACCAGGCTGCAGTGGGGACGGATACCATGAGCACACCCTCTCATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR CCA 72 bp TGCTCATGGTATCCGTCCCCACTGCAGCCTGGTTTTTaGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTC +
Preference number: 3 (lower is better)
Translates to: CSWYPSPLQPGF*VPLPWLKLVHV
Trigger: GACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGCTGCAGTGGGGACGGATACCATGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCGATCCGCCCCTGCACTaGGGCTGGACTGACCTTCTG +
Preference number: 3 (lower is better)
Translates to: LALAQVNENKGLYTCPVTDPPLH*GWTDLL
Trigger: CAGAAGGTCAGTCCAGCCCAAGTGCAGGGGCGGATC...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp CAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTTCATaGGACAGTGAGTTACTGAGAGCTCACGGGGAATCA +
Preference number: 3 (lower is better)
Translates to: QNEGRGGLSKCS*DSELLRAHGES
Trigger: TGATTCCCCGTGAGCTCTCAGTAACTCACTGTCTCATGAACACTTGGACAGCCCTCCCCGCCCTTCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp CAGATCCGCCCCTGCACTTGGGCTGGACTGACCTTCTaGGAGAGGGTCAACATGGCTTTTACTGAAAGTCCC +
Preference number: 3 (lower is better)
Translates to: QIRPCTWAGLTF*ERVNMAFTESP
Trigger: GGGACTTTCAGTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp AAGACCCTTTCCCAACATGCAAAAGGCACAGGAAAGTaGGACCCGACTGGGGTGGGTGGCATGGATGCAGAG +
Preference number: 3 (lower is better)
Translates to: KTLSQHAKGTGK*DPTGVGGMDAE
Trigger: CTCTGCATCCATGCCACCCACCCCAGTCGGGTCTCACTTTCCTGTGCCTTTTGCATGTTGGGAAAGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp CCCCATTCAGAGGTACCGGTTAGAGGAGTTGAGTCTTaGTGTCGGCTTTGTCCTGTGGAAGAGTTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: PHSEVPVRGVES*CRLCPVEEFPG
Trigger: CCCAGGGAACTCTTCCACAGGACAAAGCCGACATCAAGACTCAACTCCTCTAACCGGTACCTCTGAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR CCA 72 bp GGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATaGTATCCGTCCCCACTGCAGCCTGGTTTTTGGGTG +
Preference number: 3 (lower is better)
Translates to: GPNQKDNERVCS*YPSPLQPGFWV
Trigger: CACCCAAAAACCAGGCTGCAGTGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCAAGTAGAGCCGTGGCCTaGAGTCACAGCATTGGCAAC +
Preference number: 3 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPSRAVA*SHSIGN
Trigger: GTTGCCAATGCTGTGACTCAAGGCCACGGCTCTACT...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTTTGGGTGCCACTGCCTaGGCTCAAGCTAGTCCATGT +
Preference number: 3 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGLGATA*AQASPC
Trigger: ACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAA...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCATTGGGTGCCACTGCCTaGGCTCAAGCTAGTCCATGT +
Preference number: 3 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPLGATA*AQASPC
Trigger: ACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAA...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGGATCCGCCCCTGCACTaGGGCTGGACTGACCTTCTG +
Preference number: 3 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEDPPLH*GWTDLL
Trigger: CAGAAGGTCAGTCCAGCCCAAGTGCAGGGGCGGATC...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp GAGGGCTGTCCAAGTGTTCATGAGACAGTGAGTTACTaGGAGCTCACGGGGAATCACACAGCACAGAGACAC +
Preference number: 3 (lower is better)
Translates to: EGCPSVHETVSY*ELTGNHTAQRH
Trigger: GTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTCACTGTCTCATGAACACTTGGACAGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp GCCAAACCCAACACATGGACCAAATCAGAAGGACAATaGGAGGGTGTGCTCATGGTATCCGTCCCCACTGCA +
Preference number: 3 (lower is better)
Translates to: AKPNTWTKSEGQ*EGVLMVSVPTA
Trigger: TGCAGTGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATGTGTTGGGTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp AAGTCAGTCTGGAAGCCAGCCCCAGACCCAGCAACTTaGGACAGGCAGTCAACTCTTGCTTGCTCTTGTGAA +
Preference number: 3 (lower is better)
Translates to: KSVWKPAPDPAT*DRQSTLACSCE
Trigger: TTCACAAGAGCAAGCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR GCA 72 bp ACACATGGACCAAATCAGAAGGACAATGAGAGGGTGTaGTCATGGTATCCGTCCCCACTGCAGCCTGGTTTT +
Preference number: 3 (lower is better)
Translates to: THGPNQKDNERV*SWYPSPLQPGF
Trigger: AAAACCAGGCTGCAGTGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGCTCCTGGATGCTTTATaGGGGCTTTTGGTGGTTTCT +
Preference number: 3 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQLLDAL*GLLVVS
Trigger: AGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAG...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp GGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATaGGCGGCAGTGACACCAAGACCCTTTCCCAACATG +
Preference number: 3 (lower is better)
Translates to: GCFIGAFGGFYA*AAVTPRPFPNM
Trigger: CATGTTGGGAAAGGGTCTTGGTGTCACTGCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR GCA 72 bp TCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATaGATGAGCGGCAGTGACACCAAGACCCTTTCCCAA +
Preference number: 3 (lower is better)
Translates to: SWMLYWGFWWFL*MSGSDTKTLSQ
Trigger: TTGGGAAAGGGTCTTGGTGTCACTGCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR CCA 72 bp AACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTaGTTTCTATGCATGAGCGGCAGTGACACCAAGACC +
Preference number: 3 (lower is better)
Translates to: NCSSWMLYWGFW*FLCMSGSDTKT
Trigger: GGTCTTGGTGTCACTGCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR CCA 72 bp AGCAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTaGTGGTTTCTATGCATGAGCGGCAGTGACACCAAG +
Preference number: 3 (lower is better)
Translates to: SNCSSWMLYWGF*WFLCMSGSDTK
Trigger: CTTGGTGTCACTGCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGGTCTTGATGTCGGCTTaGTCCTGTGGAAGAGTTCCC +
Preference number: 3 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEVLMSA*SCGRVP
Trigger: GGGAACTCTTCCACAGGACAAAGCCGACATCAAGAC...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTGCTTTATTGGGGCTTTaGGTGGTTTCTATGCATGAG +
Preference number: 3 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGALLGL*VVSMHE
Trigger: CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGC...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR-3UTR CAA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTTACCGGTTAGAGGAGTaGAGTCTTGATGTCGGCTTT +
Preference number: 3 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCYRLEE*SLDVGF
Trigger: AAAGCCGACATCAAGACTCAACTCCTCTAACCGGTA...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp TCGCTTCCTCTCTCTCTTTTAGTAGAGCCGTGGCCTTaGGTCACAGCATTGGCAACGTCTACTTCTAAACTA +
Preference number: 3 (lower is better)
Translates to: SLPLSLLVEPWP*VTALATSTSKL
Trigger: TAGTTTAGAAGTAGACGTTGCCAATGCTGTGACTCAAGGCCACGGCTCTACTAAAAGAGAGAGAGGAAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp CAACGTCTACTTCTAAACTACGGAATGTTTTCACACTaGCGGTATTATTACTCAGAACGAAGGGCGGGGAGG +
Preference number: 3 (lower is better)
Translates to: QRLLLNYGMFSH*RYYYSERRAGR
Trigger: CCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTGAAAACATTCCGTAGTTTAGAAGTAGACGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp AACTTGAGACAGGCAGTCAACTCTTGCTTGCTCTTGTaGAGAACTGAGACTGAAACCTCACATCTCTACCCT +
Preference number: 3 (lower is better)
Translates to: NLRQAVNSCLLL*RTETETSHLYP
Trigger: AGGGTAGAGATGTGAGGTTTCAGTCTCAGTTCTTCACAAGAGCAAGCAAGAGTTGACTGCCTGTCTCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR GCA 72 bp CTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATaGCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAG +
Preference number: 3 (lower is better)
Translates to: LAQVNENKGLYT*PVTCKGLSLNE
Trigger: CTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR TCA 72 bp ATCCTAACCAGTCTCCACAGTTCCATCTTGAGACCTTaGATCGATAGAAAAGGCATTCGTGTTTTCTGTTTT +
Preference number: 3 (lower is better)
Translates to: ILTSLHSSILRP*IDRKGIRVFCF
Trigger: AAAACAGAAAACACGAATGCCTTTTCTATCGATTCAAGGTCTCAAGATGGAACTGTGGAGACTGGTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GCTGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGGGCACCGCCAGGGGCTaGGCAGGGAAGCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: AAGCPPRASGPPRALWAPGTARG*AGKPEG
Trigger: CCCCTCTGGCTTCCCTGCCCAGCCCCTGGCGGTGCC...CGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp GGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGCCAGGGTGCAGCACCCGTGCGTaGTGCAGGCTGCCCACCTCG +
Preference number: 4 (lower is better)
Translates to: GCPPRASGPPRALWAPPGCSTRA*CRLPTS
Trigger: CGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCA...CCCTGGCGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CCA 90 bp GCGTGCTGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCGGGCCTCCGCTGGCTTaGCCGCATCGCTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: ACCRLPTSGIRATTCSVGGPPLA*PHRSPA
Trigger: CGCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCC...GCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CCA 90 bp GCACCCGTGCGTGCTGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTGTCGGGGGCCTCCGCTaGCTTGGCCGCATCGCTCTC +
Preference number: 4 (lower is better)
Translates to: APVRAAGCPPRASGPPRAVGGLR*LGRIAL
Trigger: GAGAGCGATGCGGCCAAGCCAGCGGAGGCCCCCGAC...AGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CCA 90 bp CCCATGCTCGGGCTTGGCTGCTGGCGGACAGGGGATTCTAGTGGTGGCCCGGCCCTCTCCCTGGGCCAATaGGCGGGGCTGGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: PMLGLGCWRTGDSSGGPALSLGQ*AGLAAS
Trigger: CGAGGCGGCCAGCCCCGCCCATTGGCCCAGGGAGAG...GGCCGGGCCACCACTAGAATCCCCTGTCCGCCAGCAGCCAAGCCCGAGCATGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CCA 90 bp GCACCCGTGCGTGCTGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCCACCACGTGCTCTGTaGGCACCGCCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: APVRAAGCPPRASGPPRAPPRAL*APPGAG
Trigger: CCCAGCCCCTGGCGGTGCCCACAGAGCACGTGGTGG...AGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp GGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTGCAGGCTGCCCTGGGCACCCCCATaGTCGGGCTTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSASSSSRYCSTRACCRLPWAPP*SGLAAG
Trigger: GCCAGCAGCCAAGCCCGAGCATGGGGGTGCCCAGGG...CAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CCA 90 bp TGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGCCGAACCAGGCTCTCCCTaGGCCAATGGGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CRLPTSGIRATTCSVGTAEPGSP*ANGRGW
Trigger: CCAGCCCCGCCCATTGGCCCAGGGAGAGCCTGGTTC...GGCGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp CGTGCGTGCTGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGTGCGTGCTGCAGGCTaGCCACCTCGGGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: RACCRLPTSGIRATTCSVVRAAG*PPRASG
Trigger: CCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCAC...CACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp GCTGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGGTACTGCAGCACCCGTaGGTGCTGCAGGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: AAGCPPRASGPPRALWAPVLQHP*VLQAAH
Trigger: GTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTAC...CGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp CACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGCCAGGGGCTGGGCCAGCTCCAGACTTGCTaGCAGGCGGGGTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: HLGHQGHHVLCGHRQGLGQLQTC*QAGSSC
Trigger: ACAGGAGGACCCCGCCTGGCAGCAAGTCTGGAGCTG...GCCCAGCCCCTGGCGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp CCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGCCAGGGGCTGGTCTCAGCTCCAGACTTaGTGCCAGGCGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PTSGIRATTCSVGTARGWSQLQT*CQAGSS
Trigger: GGAGGACCCCGCCTGGCAGCAAGTCTGGAGCTGAGA...CCAGCCCCTGGCGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp CACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGCCAGGGGCTGGGCCTCCTCACTGGGCTCTaGCAAGCTGTCCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: HLGHQGHHVLCGHRQGLGLLTGL*QAVPEG
Trigger: ACCCTCGGGGACAGCTTGGCAGAGCCCAGTGAGGAG...GCCCAGCCCCTGGCGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR TCA 90 bp CACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGCCAGGGGCTGGGCGCACCTTCTGCGAGCTaGAGGACTGGGTCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: HLGHQGHHVLCGHRQGLGAPSAS*RTGSSG
Trigger: ACCACTGGACCCAGTCCTTCAGCTCGCAGAAGGTGC...GCCCAGCCCCTGGCGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR TCA 90 bp TGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTGCAGGCTGCCCACTGCCCCCGGCATCCCTaGGCCCCAAGATGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: CVQQLPVLQHPCVLQAAHCPRHP*APRCLC
Trigger: GCAGAGACATCTTGGGGCTCAGGGATGCCGGGGGCA...GTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp TCGGGCTTGGCTGCTGGCGGACAGGGGATTCTAGTGGTGGCCCGGCCATCTCTCAGCACCCGTGCGTGCTaGAGGCTGCCCACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SGLAAGGQGILVVARPSLSTRAC*RLPTSG
Trigger: GCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCT...GAGAGATGGCCGGGCCACCACTAGAATCCCCTGTCCGCCAGCAGCCAAGCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp CCCATGCTCGGGCTTGGCTGCTGGCGGACAGGGGATTCTAGTGGTGGCCCGGCCAGCAGCTCCCGGTACTaGAGCACCCGTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PMLGLGCWRTGDSSGGPASSSRY*STRACC
Trigger: GCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCT...GGCCGGGCCACCACTAGAATCCCCTGTCCGCCAGCAGCCAAGCCCGAGCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp GTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTGCAGGCTGCCCAGCCCCAAGATGTCTCTaGCCAGAGGCCCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: VRPAAPGTAAPVRAAGCPAPRCL*PEALGT
Trigger: GGTGCCCAGGGCCTCTGGGCAGAGACATCTTGGGGC...TGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CCA 90 bp GGCATCCATGGGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCCCCATGCTCGGGCTTaGCTGCTGGCGGACAGGGGA +
Preference number: 4 (lower is better)
Translates to: GIHGQCVQQLPVLQHPCVPHARA*LLADRG
Trigger: TCCCCTGTCCGCCAGCAGCCAAGCCCGAGCATGGGG...CACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCCCATGGATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR TCA 90 bp GTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTGCAGGCTGCCCAGGCGGGGTCCTCCTGTaGAGGTGCGCTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: VRPAAPGTAAPVRAAGCPGGVLL*RCAPHS
Trigger: ACTATGTGGAGCGCACCTTCACAGGAGGACCCCGCC...TGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp CGTGCGTGCTGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCATCCATGGGCAGTaGGTCCAGCAGCTCCCGGTA +
Preference number: 4 (lower is better)
Translates to: RACCRLPTSGIRATTCSVGIHGQ*VQQLPV
Trigger: TACCGGGAGCTGCTGGACGCACTGCCCATGGATGCC...CACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CCA 90 bp CGTGCGTGCTGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGTCTCCAGCGCGGAGATaGGCCACCAGCTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RACCRLPTSGIRATTCSVSPARR*ATSCSW
Trigger: CCAACTGCAGCTGGTGGCCCATCTCCGCGCTGGAGA...CACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp AGGCATCCATGGGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTATCAGGGCCACCACGTaGTCTGTGGGCACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RHPWAVRPAAPGTAAPVRIRATT*SVGTAR
Trigger: CCTGGCGGTGCCCACAGAGCACGTGGTGGCCCTGAT...ACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCCCATGGATGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CCA 90 bp GCGTGCTGCAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCAGCTGCAGTTGGTaGGGGTCAGATTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ACCRLPTSGIRATTCSVGTSCSW*GSDCWG
Trigger: CCCCCAACAATCTGACCCCCACCAACTGCAGCTGGT...GCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CCA 90 bp CCCACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGCCAGGGGCTGGAAGGACTGGGTCCAGTaGTACAGAACCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PTSGIRATTCSVGTARGWKDWVQ*YRTRLS
Trigger: GGAGAGCCTGGTTCTGTACCACTGGACCCAGTCCTT...CCAGCCCCTGGCGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp GTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTGCAGGCTGCCCAAGATGGGCCACCAGCTaGAGTTGGTGGGGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: VRPAAPGTAAPVRAAGCPRWATS*SWWGSD
Trigger: ATCTGACCCCCACCAACTGCAGCTGGTGGCCCATCT...TGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp GCATCCATGGGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCAACCAGGGCTCCTTGTaGTCGCTCTGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ASMGSASSSSRYCSTRACNQGSL*SLCGRL
Trigger: GAGCCTGCCACAGAGCGAGCACAAGGAGCCCTGGTT...GCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCCCATGGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTAGCACCCGTGCGTGCTaGAGGCTGCCCACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGSTRAC*RLPTSG
Trigger: GCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCT...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCCTCTCCCTGGGCCAATaGGCGGGGCTGGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSLSLGQ*AGLAAS
Trigger: CGAGGCGGCCAGCCCCGCCCATTGGCCCAGGGAGAG...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp CATCCATGGGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTCTTGTGCTCGCTCTGTaGCAGGCTCACGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: HPWAVRPAAPGTAAPVRALVLAL*QAHVPL
Trigger: GAGCGGGACGTGAGCCTGCCACAGAGCGAGCACAAG...AGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCCCATGGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR GCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTGTGCGTGCTGCAGGCTaGCCACCTCGGGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGVRAAG*PPRASG
Trigger: CCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCAC...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTGCAGCACCCGTGCGTaGTGCAGGCTGCCCACCTCG +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGCSTRA*CRLPTS
Trigger: CGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCA...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp ATCCATGGGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTGATGCTCGGGCTTGGCTaGTGGCGGACAGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: IHGQCVQQLPVLQHPCVLMLGLG*WRTGDS
Trigger: AGAATCCCCTGTCCGCCAGCAGCCAAGCCCGAGCAT...CAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCCCATGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CCA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGAGGGCCTCCGCTGGCTTaGCCGCATCGCTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRGPPLA*PHRSPA
Trigger: CGCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCC...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGAGTCGGGGGCCTCCGCTaGCTTGGCCGCATCGCTCTC +
Preference number: 4 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRVGGLR*LGRIAL
Trigger: GAGAGCGATGCGGCCAAGCCAGCGGAGGCCCCCGAC...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp AGGCATCCATGGGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTCTCGGGCTTGGCTGCTaGCGGACAGGGGATTCTAGT +
Preference number: 4 (lower is better)
Translates to: RHPWAVRPAAPGTAAPVRLGLGC*RTGDSS
Trigger: ACTAGAATCCCCTGTCCGCCAGCAGCCAAGCCCGAG...ACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCCCATGGATGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR TCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCTGTTGGGGGTCGCCATaGCAGCCCGGAATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTCWGSP*QPGIRG
Trigger: GCCTCTGATTCCGGGCTGTCATGGCGACCCCCAACA...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR GCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCAGCACCCGTGCGTGCTaGAGGCTGCCCACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPSTRAC*RLPTSG
Trigger: GCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCT...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTAGCACCCGTGCGTGCTaGAGGCTGCCCACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PLPWLKLVHVQEKREAPSSTRAC*RLPTSG
Trigger: GCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCT...AGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGATGCAGCACCCGTGCGTaGTGCAGGCTGCCCACCTCG +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGCSTRA*CRLPTS
Trigger: CGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCA...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTACTGCAGCACCCGTaGGTGCTGCAGGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPVLQHP*VLQAAH
Trigger: GTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTAC...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGCTCTCCCTGGGCCAATaGGCGGGGCTGGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: WFLGATALAQASPCPGEALSLGQ*AGLAAS
Trigger: CGAGGCGGCCAGCCCCGCCCATTGGCCCAGGGAGAG...CGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR TCA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTGTTGGGGGTCGCCATaGCAGCCCGGAATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRCWGSP*QPGIRG
Trigger: GCCTCTGATTCCGGGCTGTCATGGCGACCCCCAACA...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR TCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGTGTTGGGGGTCGCCATaGCAGCCCGGAATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPCWGSP*QPGIRG
Trigger: GCCTCTGATTCCGGGCTGTCATGGCGACCCCCAACA...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR TCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTGGAAAGCATTGGGGATaGCGGCCGACAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGGKHWG*RPTAGW
Trigger: CCACCCTGCTGTCGGCCGTCATCCCCAATGCTTTCC...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCCACCCAGGGAGCCCATaGGGAAGGACGCCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSHPGSP*GRTPRR
Trigger: TCTTCGGGGCGTCCTTCCTCATGGGCTCCCTGGGTG...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGACACCCAGGGAGCCCATaGGGAAGGACGCCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRHPGSP*GRTPRR
Trigger: TCTTCGGGGCGTCCTTCCTCATGGGCTCCCTGGGTG...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCAACCAGGGCTCCTTGTaGTCGCTCTGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTNQGSL*SLCGRL
Trigger: GAGCCTGCCACAGAGCGAGCACAAGGAGCCCTGGTT...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGTGCAGCACCCGTGCGTaGTGCAGGCTGCCCACCTCG +
Preference number: 4 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELCSTRA*CRLPTS
Trigger: CGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCA...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGTGCAGCACCCGTGCGTaGTGCAGGCTGCCCACCTCG +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMCSTRA*CRLPTS
Trigger: CGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCA...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCGTACTGCAGCACCCGTaGGTGCTGCAGGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: WVPLPWLKLVHVQEKREAVLQHP*VLQAAH
Trigger: GTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTAC...GGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCGTACTGCAGCACCCGTaGGTGCTGCAGGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSVLQHP*VLQAAH
Trigger: GTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTAC...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCAGCTCCCGGTACTaGAGCACCCGTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSSSSRY*STRACC
Trigger: GCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCT...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGTCGGGGGCCTCCGCTaGCTTGGCCGCATCGCTCTC +
Preference number: 4 (lower is better)
Translates to: AWFLGATALAQASPCPGEVGGLR*LGRIAL
Trigger: GAGAGCGATGCGGCCAAGCCAGCGGAGGCCCCCGAC...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGCTTGTGCTCGCTCTGTaGCAGGCTCACGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPLVLAL*QAHVPL
Trigger: GAGCGGGACGTGAGCCTGCCACAGAGCGAGCACAAG...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGGCATCCATGGGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTATGATGTTGTCGCGGTaGATGATGACGGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: RHPWAVRPAAPGTAAPVRMMLSR*MMTGTS
Trigger: GGAGGTGCCCGTCATCATCCACCGCGACAACATCAT...ACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCCCATGGATGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTCGGCCGTGGCGTACTTaGGGATCATGGAGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGRPWRT*GSWSRW
Trigger: CCACCGACTCCATGATCCCCAAGTACGCCACGGCCG...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTCTGGGGTGGGTGGCATaGATGCAGAGACTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGLGWVA*MQRLPR
Trigger: GCGGGGAAGTCTCTGCATCCATGCCACCCACCCCAG...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGCTGGGGTGGGTGGCATaGATGCAGAGACTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPLGWVA*MQRLPR
Trigger: GCGGGGAAGTCTCTGCATCCATGCCACCCACCCCAG...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCTCTGGGAAATTGGGGTaGGGGGCATGTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTSGKLG*GACALG
Trigger: ACCCAGGGCACATGCCCCCCACCCCAATTTCCCAGA...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTCCACCACGTGCTCTGTaGGCACCGCCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRPPRAL*APPGAG
Trigger: CCCAGCCCCTGGCGGTGCCCACAGAGCACGTGGTGG...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537864.5
CDS-3UTR TCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAACAGTCCCAGGAACTTaGGGCGGTGCAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGTVPGT*GGAGWL
Trigger: GAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGT...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCCACCCAGGGAGCCCATaGGGAAGGACGCCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCHPGSP*GRTPRR
Trigger: TCTTCGGGGCGTCCTTCCTCATGGGCTCCCTGGGTG...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTAACCAGGGCTCCTTGTaGTCGCTCTGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGNQGSL*SLCGRL
Trigger: GAGCCTGCCACAGAGCGAGCACAAGGAGCCCTGGTT...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGAACCAGGGCTCCTTGTaGTCGCTCTGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPNQGSL*SLCGRL
Trigger: GAGCCTGCCACAGAGCGAGCACAAGGAGCCCTGGTT...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGTGCGTGCTGCAGGCTaGCCACCTCGGGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRVRAAG*PPRASG
Trigger: CCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCAC...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTAGCACCCGTGCGTGCTaGAGGCTGCCCACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLSTRAC*RLPTSG
Trigger: GCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCT...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGAGGCATCCATGGGCAGTaGGTCCAGCAGCTCCCGGTA +
Preference number: 4 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRGIHGQ*VQQLPV
Trigger: TACCGGGAGCTGCTGGACGCACTGCCCATGGATGCC...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGAGGAACTTGAGGCGGTaGAGGGTGGCTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGRNLRR*RVAPRR
Trigger: CCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCT...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGACTCCAGATCCGCCCCTaGACTTGGGCTGGACTGACC +
Preference number: 4 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRLQIRP*TWAGLT
Trigger: GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAG...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCGGCATGTGCCCTGGGTaGCCCCTGAGGTCCATATAT +
Preference number: 4 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTGMCPG*PLRSIY
Trigger: ATATATGGACCTCAGGGGGCACCCAGGGCACATGCC...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCTCTCCAGCGCGGAGATaGGCCACCAGCTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSSPARR*ATSCSW
Trigger: CCAACTGCAGCTGGTGGCCCATCTCCGCGCTGGAGA...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAACCAGGCTCTCCCTaGGCCAATGGGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKREPGSP*ANGRGW
Trigger: CCAGCCCCGCCCATTGGCCCAGGGAGAGCCTGGTTC...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp TGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGGAACCAGGCTCTCCCTaGGCCAATGGGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WFLGATALAQASPCPGEAEPGSP*ANGRGW
Trigger: CCAGCCCCGCCCATTGGCCCAGGGAGAGCCTGGTTC...CGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGACGGCCGTGGCGTACTTaGGGATCATGGAGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGRPWRT*GSWSRW
Trigger: CCACCGACTCCATGATCCCCAAGTACGCCACGGCCG...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCAGCTCCGCCTCAATCTaGTCCAGCACCATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTSSASI*SSTMAS
Trigger: ACTGGCCATGGTGCTGGACCAGATTGAGGCGGAGCT...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGACGGCCGACAGCAGGGTaGTGTGGATGTCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGRPTAG*CGCHPG
Trigger: TCCTGGGTGACATCCACACCACCCTGCTGTCGGCCG...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCGCACCTCCCAGAATCTaGGCCCTGGTGGACGAAACA +
Preference number: 4 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTAPPRI*ALVDET
Trigger: TGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTGC...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTCTGGGAAATTGGGGTaGGGGGCATGTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGSGKLG*GACALG
Trigger: ACCCAGGGCACATGCCCCCCACCCCAATTTCCCAGA...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGGGCACCGCCAGGGGCTaGGCAGGGAAGCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQGTARG*AGKPEG
Trigger: CCCCTCTGGCTTCCCTGCCCAGCCCCTGGCGGTGCC...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537864.5
CDS-3UTR TCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTCCACGTGCTCTCCTGTaGAGGTGCGCTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGPRALL*RCAPHS
Trigger: ACTATGTGGAGCGCACCTTCACAGGAGAGCACGTGG...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACACAGTCCCAGGAACTTaGGGCGGTGCAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYTVPGT*GGAGWL
Trigger: GAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGT...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCGGAAAGCATTGGGGATaGCGGCCGACAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSGKHWG*RPTAGW
Trigger: CCACCCTGCTGTCGGCCGTCATCCCCAATGCTTTCC...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAACACCCAGGGAGCCCATaGGGAAGGACGCCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: AWFLGATALAQASPCPGEHPGSP*GRTPRR
Trigger: TCTTCGGGGCGTCCTTCCTCATGGGCTCCCTGGGTG...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCCCTGCACTTGGGCTGGACTGACCTTCTGAGAGAGGGTCAACATGGCTTTTACAGAGGGAAGGGGAGGTaGGGGGTCAGGCCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PLHLGWTDLLREGQHGFYRGKGR*GVRPSE
Trigger: CTCAGAGGGCCTGACCCCTCACCTCCCCTTCCCTCT...GTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTAGAGGGAAGGGGAGGTaGGGGGTCAGGCCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRRGKGR*GVRPSE
Trigger: CTCAGAGGGCCTGACCCCTCACCTCCCCTTCCCTCT...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCATGCATGAGCGGCAGTaGCACCAAGACCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTMHERQ*HQDPFP
Trigger: TGGGAAAGGGTCTTGGTGTCACTGCCGCTCATGCAT...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTAGATGGGCCACCAGCTaGAGTTGGTGGGGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGRWATS*SWWGSD
Trigger: ATCTGACCCCCACCAACTGCAGCTGGTGGCCCATCT...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR GCA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGACCAGCCGCACCTTCTaGGAGCTGAAGGACTGGGTC +
Preference number: 4 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGTSRTF*ELKDWV
Trigger: GACCCAGTCCTTCAGCTCGCAGAAGGTGCGGCTGGT...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR GCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGCATCCATGGGCAGTaGGTCCAGCAGCTCCCGGTA +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMGIHGQ*VQQLPV
Trigger: TACCGGGAGCTGCTGGACGCACTGCCCATGGATGCC...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACGGCATCCATGGGCAGTaGGTCCAGCAGCTCCCGGTA +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYGIHGQ*VQQLPV
Trigger: TACCGGGAGCTGCTGGACGCACTGCCCATGGATGCC...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCAGGAACTTGAGGCGGTaGAGGGTGGCTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCRNLRR*RVAPRR
Trigger: CCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCT...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTCTCCAGATCCGCCCCTaGACTTGGGCTGGACTGACC +
Preference number: 4 (lower is better)
Translates to: PLPWLKLVHVQEKREAPSLQIRP*TWAGLT
Trigger: GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAG...AGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAATCAGGGCCACCACGTaGTCTGTGGGCACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: AWFLGATALAQASPCPGEIRATT*SVGTAR
Trigger: CCTGGCGGTGCCCACAGAGCACGTGGTGGCCCTGAT...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537864.5
CDS-3UTR CCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCCTCTCCCTGGGCCAATaGGCGGGGCTGGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGLSLGQ*AGLAAS
Trigger: CGAGGCGGCCAGCCCCGCCCATTGGCCCAGGGAGAG...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTGAACCAGGCTCTCCCTaGGCCAATGGGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCEPGSP*ANGRGW
Trigger: CCAGCCCCGCCCATTGGCCCAGGGAGAGCCTGGTTC...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGCTTGTGCTCGCTCTGTaGCAGGCTCACGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMLVLAL*QAHVPL
Trigger: GAGCGGGACGTGAGCCTGCCACAGAGCGAGCACAAG...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTGCGGATCTCGGCCGTaGCGTACTTGGGGATCATGG +
Preference number: 4 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGCGSRP*RTWGSW
Trigger: CCATGATCCCCAAGTACGCCACGGCCGAGATCCGCA...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGATGCGGATCTCGGCCGTaGCGTACTTGGGGATCATGG +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGCGSRP*RTWGSW
Trigger: CCATGATCCCCAAGTACGCCACGGCCGAGATCCGCA...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCAGAAGGACTGCAGGTTaGGCCGGCTGCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: WVPLPWLKLVHVQEKREARRTAG*AGCHLP
Trigger: GGGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCT...GGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGAAGGACTGCAGGTTaGGCCGGCTGCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSRRTAG*AGCHLP
Trigger: GGGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCT...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGCGGCCGACAGCAGGGTaGTGTGGATGTCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMRPTAG*CGCHPG
Trigger: TCCTGGGTGACATCCACACCACCCTGCTGTCGGCCG...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGCCAGAATCTGGGCCCTaGTGGACGAAACATCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRPESGP*WTKHPG
Trigger: CCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGG...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGCACCTCCCAGAATCTaGGCCCTGGTGGACGAAACA +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPAPPRI*ALVDET
Trigger: TGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTGC...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCGTCGGCTTTGTCCTGTaGAAGAGTTCCCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTVGFVL*KSSLGK
Trigger: CTTGCCCAGGGAACTCTTCCACAGGACAAAGCCGAC...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTTCAGGGACCTCCCATaGGGTCTCCGGTTATCCAGC +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGFRDLP*GLRLSS
Trigger: GCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAA...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCGTCCCCACTGCAGCCTaGTTTTTGGGTGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: WVPLPWLKLVHVQEKREAVPTAA*FLGATA
Trigger: GGCAGTGGCACCCAAAAACCAGGCTGCAGTGGGGAC...GGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCCTGGGGTGGGTGGCATaGATGCAGAGACTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCLGWVA*MQRLPR
Trigger: GCGGGGAAGTCTCTGCATCCATGCCACCCACCCCAG...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGAAAGTGAGACCCGACTaGGGTGGGTGGCATGGATGC +
Preference number: 4 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRKVRPD*GGWHGC
Trigger: GCATCCATGCCACCCACCCCAGTCGGGTCTCACTTT...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCCTTGAACTCCTGGCCTaGAGCAATTCTCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTLELLA*SNSPAL
Trigger: CAAGGCGGGAGAATTGCTCCAGGCCAGGAGTTCAAG...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTACAGTCCCAGGAACTTaGGGCGGTGCAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRTVPGT*GGAGWL
Trigger: GAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGT...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGGTAGAGCCGTGGCCTTaGGTCACAGCATTGGCAACG +
Preference number: 4 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGVEPWP*VTALAT
Trigger: CGTTGCCAATGCTGTGACTCAAGGCCACGGCTCTAC...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTGCTGGACTGACCTTCTaGGAGAGGGTCAACATGGCT +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGAGLTF*ERVNMA
Trigger: AGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGC...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCGGTGGTTTCTATGCATaGGCGGCAGTGACACCAAGA +
Preference number: 4 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTGGFYA*AAVTPR
Trigger: TCTTGGTGTCACTGCCGCTCATGCATAGAAACCACC...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAAGATGGGCCACCAGCTaGAGTTGGTGGGGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGRWATS*SWWGSD
Trigger: ATCTGACCCCCACCAACTGCAGCTGGTGGCCCATCT...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR GCA 90 bp TCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGATCAGGGCCACCACGTaGTCTCCTGTGAAGGTGCGC +
Preference number: 4 (lower is better)
Translates to: SDLQGPPMGSPVIQPHSEIRATT*SPVKVR
Trigger: GCGCACCTTCACAGGAGAGCACGTGGTGGCCCTGAT...CTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTAGCAGCTCCCGGTACTaGAGCACCCGTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPSSSRY*STRACC
Trigger: GCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCT...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTAGCAGCTCCCGGTACTaGAGCACCCGTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCSSSRY*STRACC
Trigger: GCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCT...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGGCTCGGGATGCAGGATaGAGCCATGCGTGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGARDAG*SHACRH
Trigger: ATGCCTACACGCATGGCTGCATCCTGCATCCCGAGC...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCGTGGTGAGCTCGGGATaGAGGATGCAGCCATGCGTG +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCVVSSG*RMQPCV
Trigger: CACGCATGGCTGCATCCTGCATCCCGAGCTCACCAC...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGCACAGCTCGCATTTCTaGCCCTCGTTCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPHSSHF*PSFSSF
Trigger: GAAGCTGGAGAACGAGGGGCAGAAATGCGAGCTGTG...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000617075.4
CDS-3UTR GCA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGCACAGCTCGCATTTCTaGCCCTCGTTCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRHSSHF*PSFSSF
Trigger: GAAGCTGGAGAACGAGGGGCAGAAATGCGAGCTGTG...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000617075.4
CDS-3UTR GCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGCAGGTTGGGCCGGCTaGCATCTTCCCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPAGWAG*HLPSIS
Trigger: AGAAATACTGGGAAGATGGCAGCCGGCCCAACCTGC...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCTCTCAAAGAAGGACTaGAGGTTGGGCCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: WVPLPWLKLVHVQEKREALSKKD*RLGRLP
Trigger: TGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAG...GGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGACTCTCAAAGAAGGACTaGAGGTTGGGCCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRLSKKD*RLGRLP
Trigger: TGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAG...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGGTATCCGTCCCCACTaGAGCCTGGTTTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGGIRPH*SLVFGC
Trigger: GCACCCAAAAACCAGGCTGCAGTGGGGACGGATACC...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCGGTGGGTGGCATGGATaGAGAGACTTCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSGGWHG*RDFPAL
Trigger: GAGAGCGGGGAAGTCTCTGCATCCATGCCACCCACC...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAACCAGCTGCAGTTGGTaGGGGTCAGATTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGTSCSW*GSDCWG
Trigger: CCCCCAACAATCTGACCCCCACCAACTGCAGCTGGT...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAATCTCCAGCGCGGAGATaGGCCACCAGCTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: AWFLGATALAQASPCPGESPARR*ATSCSW
Trigger: CCAACTGCAGCTGGTGGCCCATCTCCGCGCTGGAGA...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCGGGCCTCCGCTGGCTTaGCCGCATCGCTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTGPPLA*PHRSPA
Trigger: CGCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCC...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCGGGCCTCCGCTGGCTTaGCCGCATCGCTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGGPPLA*PHRSPA
Trigger: CGCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCC...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTATGATGTTGTCGCGGTaGATGATGACGGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGMMLSR*MMTGTS
Trigger: GGAGGTGCCCGTCATCATCCACCGCGACAACATCAT...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGTGCGGATCTCGGCCGTaGCGTACTTGGGGATCATGG +
Preference number: 4 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELCGSRP*RTWGSW
Trigger: CCATGATCCCCAAGTACGCCACGGCCGAGATCCGCA...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCTCTGGTCCAGCACCATaGCCAGTTCCCCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSSGPAP*PVPRGS
Trigger: AGATCCTCGGGGAACTGGCCATGGTGCTGGACCAGA...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACAGAAGGACTGCAGGTTaGGCCGGCTGCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYRRTAG*AGCHLP
Trigger: GGGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCT...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGATTCAGGGACCTCCCATaGGGTCTCCGGTTATCCAGC +
Preference number: 4 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRFRDLP*GLRLSS
Trigger: GCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAA...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACGTCCCCACTGCAGCCTaGTTTTTGGGTGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYVPTAA*FLGATA
Trigger: GGCAGTGGCACCCAAAAACCAGGCTGCAGTGGGGAC...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTCTCTCCCCGGCTCCATaGCACCGTGTAGTACAGGGA +
Preference number: 4 (lower is better)
Translates to: PLPWLKLVHVQEKREAPSLSPAP*HRVVQG
Trigger: TCCCTGTACTACACGGTGCCATGGAGCCGGGGAGAG...AGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCCTCTCCCCGGCTCCATaGCACCGTGTAGTACAGGGA +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSLSPAP*HRVVQG
Trigger: TCCCTGTACTACACGGTGCCATGGAGCCGGGGAGAG...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGCCCGACTGGGGTGGGTaGCATGGATGCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: SDLQGPPMGSPVIQPHSEPDWGG*HGCRDF
Trigger: GAAGTCTCTGCATCCATGCCACCCACCCCAGTCGGG...CTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCCCCGACTGGGGTGGGTaGCATGGATGCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSPDWGG*HGCRDF
Trigger: GAAGTCTCTGCATCCATGCCACCCACCCCAGTCGGG...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCCCTGGAAAGTCAGTCTaGAAGCCAGCCCCAGACCCA +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSPGKSV*KPAPDP
Trigger: TGGGTCTGGGGCTGGCTTCCAGACTGACTTTCCAGG...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTGGAAAGTCAGTCTaGAAGCCAGCCCCAGACCCA +
Preference number: 4 (lower is better)
Translates to: WVPLPWLKLVHVQEKREAPGKSV*KPAPDP
Trigger: TGGGTCTGGGGCTGGCTTCCAGACTGACTTTCCAGG...GGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGCTTGAACTCCTGGCCTaGAGCAATTCTCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPLELLA*SNSPAL
Trigger: CAAGGCGGGAGAATTGCTCCAGGCCAGGAGTTCAAG...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGACATGGTCCAGTTTCATaGGGTCCGTGGTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRHGPVS*GPWWHW
Trigger: CCAATGCCACCACGGACCTCATGAAACTGGACCATG...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR TCA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGATGGGGGTTTCCTCTTaGCCAGCCGGAAAGCATTGG +
Preference number: 4 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGMGVSS*PAGKHW
Trigger: CCAATGCTTTCCGGCTGGTCAAGAGGAAACCCCCAT...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGTAGAGCCGTGGCCTTaGGTCACAGCATTGGCAACG +
Preference number: 4 (lower is better)
Translates to: PLPWLKLVHVQEKREAPSVEPWP*VTALAT
Trigger: CGTTGCCAATGCTGTGACTCAAGGCCACGGCTCTAC...AGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTAGAGGGAAGGGGAGGTaGGGGGTCAGGCCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGRGKGR*GVRPSE
Trigger: CTCAGAGGGCCTGACCCCTCACCTCCCCTTCCCTCT...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGAAAGGCACAGGAAAGTaGGACCCGACTGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELKGTGK*DPTGVG
Trigger: ACCCACCCCAGTCGGGTCTCACTTTCCTGTGCCTTT...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCATGCATGAGCGGCAGTaGCACCAAGACCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSMHERQ*HQDPFP
Trigger: TGGGAAAGGGTCTTGGTGTCACTGCCGCTCATGCAT...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGGGTGGTTTCTATGCATaGGCGGCAGTGACACCAAGA +
Preference number: 4 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRGGFYA*AAVTPR
Trigger: TCTTGGTGTCACTGCCGCTCATGCATAGAAACCACC...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGCCCTGGGTGCCCCCTaGGGTCCATATATAGGTTTA +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGALGAP*GPYIGL
Trigger: TAAACCTATATATGGACCTCAGGGGGCACCCAGGGC...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTAACCAGGGCTCCTTGTaGTCGCTCTGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRNQGSL*SLCGRL
Trigger: GAGCCTGCCACAGAGCGAGCACAAGGAGCCCTGGTT...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCGTGCGTGCTGCAGGCTaGCCACCTCGGGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTVRAAG*PPRASG
Trigger: CCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCAC...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGAGGCATCCATGGGCAGTaGGTCCAGCAGCTCCCGGTA +
Preference number: 4 (lower is better)
Translates to: ELLRAHGESHSTETPTVRGIHGQ*VQQLPV
Trigger: TACCGGGAGCTGCTGGACGCACTGCCCATGGATGCC...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGCTCGGGATGCAGGATaGAGCCATGCGTGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: SDLQGPPMGSPVIQPHSEARDAG*SHACRH
Trigger: ATGCCTACACGCATGGCTGCATCCTGCATCCCGAGC...CTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CCCCTGCACTTGGGCTGGACTGACCTTCTGAGAGAGGGTCAACATGGCTTTTACGTGGTGAGCTCGGGATaGAGGATGCAGCCATGCGTG +
Preference number: 4 (lower is better)
Translates to: PLHLGWTDLLREGQHGFYVVSSG*RMQPCV
Trigger: CACGCATGGCTGCATCCTGCATCCCGAGCTCACCAC...GTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGCACAGCTCGCATTTCTaGCCCTCGTTCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGHSSHF*PSFSSF
Trigger: GAAGCTGGAGAACGAGGGGCAGAAATGCGAGCTGTG...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000617075.4
CDS-3UTR GCA 90 bp TGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCACAGCTCGCATTTCTaGCCCTCGTTCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WVPLPWLKLVHVQEKREAHSSHF*PSFSSF
Trigger: GAAGCTGGAGAACGAGGGGCAGAAATGCGAGCTGTG...GGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000617075.4
CDS-3UTR GCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCGCAGGTTGGGCCGGCTaGCATCTTCCCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSAGWAG*HLPSIS
Trigger: AGAAATACTGGGAAGATGGCAGCCGGCCCAACCTGC...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCCTCTCAAAGAAGGACTaGAGGTTGGGCCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSLSKKD*RLGRLP
Trigger: TGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAG...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGGTATCCGTCCCCACTaGAGCCTGGTTTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SDLQGPPMGSPVIQPHSEGIRPH*SLVFGC
Trigger: GCACCCAAAAACCAGGCTGCAGTGGGGACGGATACC...CTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCGGTATCCGTCCCCACTaGAGCCTGGTTTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCGIRPH*SLVFGC
Trigger: GCACCCAAAAACCAGGCTGCAGTGGGGACGGATACC...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTGACAATGAGAGGGTGTaGTCATGGTATCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGDNERV*SWYPSP
Trigger: TGGGGACGGATACCATGAGCACACCCTCTCATTGTC...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGGTGGGTGGCATGGATaGAGAGACTTCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRGGWHG*RDFPAL
Trigger: GAGAGCGGGGAAGTCTCTGCATCCATGCCACCCACC...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGGTGGGTGGCATGGATaGAGAGACTTCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: AWFLGATALAQASPCPGEGGWHG*RDFPAL
Trigger: GAGAGCGGGGAAGTCTCTGCATCCATGCCACCCACC...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCGGCATGTGCCCTGGGTaGCCCCTGAGGTCCATATAT +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCGMCPG*PLRSIY
Trigger: ATATATGGACCTCAGGGGGCACCCAGGGCACATGCC...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTAGGCATGTGCCCTGGGTaGCCCCTGAGGTCCATATAT +
Preference number: 4 (lower is better)
Translates to: DLQGPPMGSPVIQPHSEVGMCPG*PLRSIY
Trigger: ATATATGGACCTCAGGGGGCACCCAGGGCACATGCC...TACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGACCAGCTGCAGTTGGTaGGGGTCAGATTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMTSCSW*GSDCWG
Trigger: CCCCCAACAATCTGACCCCCACCAACTGCAGCTGGT...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGGCCACCAGCTGCAGTTaGTGGGGGTCAGATTGTTGG +
Preference number: 4 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELATSCS*WGSDCW
Trigger: CCAACAATCTGACCCCCACCAACTGCAGCTGGTGGC...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTTCTCCAGCGCGGAGATaGGCCACCAGCTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCSPARR*ATSCSW
Trigger: CCAACTGCAGCTGGTGGCCCATCTCCGCGCTGGAGA...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGAAAGGACTGGGTCCAGTaGTACAGAACCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRKDWVQ*YRTRLS
Trigger: GGAGAGCCTGGTTCTGTACCACTGGACCCAGTCCTT...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAAAGGACTGGGTCCAGTaGTACAGAACCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGKDWVQ*YRTRLS
Trigger: GGAGAGCCTGGTTCTGTACCACTGGACCCAGTCCTT...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACTTGTGCTCGCTCTGTaGCAGGCTCACGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: ELLRAHGESHSTETPTVRLVLAL*QAHVPL
Trigger: GAGCGGGACGTGAGCCTGCCACAGAGCGAGCACAAG...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTCTTGTGCTCGCTCTGTaGCAGGCTCACGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCLVLAL*QAHVPL
Trigger: GAGCGGGACGTGAGCCTGCCACAGAGCGAGCACAAG...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGTCTGGTCCAGCACCATaGCCAGTTCCCCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMSGPAP*PVPRGS
Trigger: AGATCCTCGGGGAACTGGCCATGGTGCTGGACCAGA...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCTCTGGTCCAGCACCATaGCCAGTTCCCCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCSGPAP*PVPRGS
Trigger: AGATCCTCGGGGAACTGGCCATGGTGCTGGACCAGA...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCAGCTCCGCCTCAATCTaGTCCAGCACCATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPSSASI*SSTMAS
Trigger: ACTGGCCATGGTGCTGGACCAGATTGAGGCGGAGCT...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCCGCCCCGAAGAAGGATaGGGGTTTCCTCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPRPEEG*GFPLDQ
Trigger: CTGGTCAAGAGGAAACCCCCATCCTTCTTCGGGGCG...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTCCAGAATCTGGGCCCTaGTGGACGAAACATCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLPWLKLVHVQEKREAPSPESGP*WTKHPG
Trigger: CCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGG...AGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTGGGTGCCACTGCCTTaGCTCAAGCTAGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGWVPLP*LKLVHV
Trigger: GACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCGAGAGGGTGTGCTCATaGTATCCGTCCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSERVCS*YPSPLQ
Trigger: CTGCAGTGGGGACGGATACCATGAGCACACCCTCTC...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCGAGAGGGTGTGCTCATaGTATCCGTCCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPERVCS*YPSPLQ
Trigger: CTGCAGTGGGGACGGATACCATGAGCACACCCTCTC...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCCCCCTGCACTTGGGCTaGACTGACCTTCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPPLHLG*TDLLRE
Trigger: CTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAACCCGACTGGGGTGGGTaGCATGGATGCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: AWFLGATALAQASPCPGEPDWGG*HGCRDF
Trigger: GAAGTCTCTGCATCCATGCCACCCACCCCAGTCGGG...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCAAAGTGAGACCCGACTaGGGTGGGTGGCATGGATGC +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSKVRPD*GGWHGC
Trigger: GCATCCATGCCACCCACCCCAGTCGGGTCTCACTTT...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCCCTGGAAAGTCAGTCTaGAAGCCAGCCCCAGACCCA +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPPGKSV*KPAPDP
Trigger: TGGGTCTGGGGCTGGCTTCCAGACTGACTTTCCAGG...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCTTGAACTCCTGGCCTaGAGCAATTCTCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: WVPLPWLKLVHVQEKREALELLA*SNSPAL
Trigger: CAAGGCGGGAGAATTGCTCCAGGCCAGGAGTTCAAG...GGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTCCACGTGCTCTCCTGTaGAGGTGCGCTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRPRALL*RCAPHS
Trigger: ACTATGTGGAGCGCACCTTCACAGGAGAGCACGTGG...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCCATGGTCCAGTTTCATaGGGTCCGTGGTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPHGPVS*GPWWHW
Trigger: CCAATGCCACCACGGACCTCATGAAACTGGACCATG...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR TCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTACAGTCCCAGGAACTTaGGGCGGTGCAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGTVPGT*GGAGWL
Trigger: GAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGT...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTGGAAAGCATTGGGGATaGCGGCCGACAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGGKHWG*RPTAGW
Trigger: CCACCCTGCTGTCGGCCGTCATCCCCAATGCTTTCC...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCATGGGGGTTTCCTCTTaGCCAGCCGGAAAGCATTGG +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCMGVSS*PAGKHW
Trigger: CCAATGCTTTCCGGCTGGTCAAGAGGAAACCCCCAT...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCGAGACAGTGAGTTACTaGGAGCTCACGGGGAATCAC +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSETVSY*ELTGNH
Trigger: GTGATTCCCCGTGAGCTCTCAGTAACTCACTGTCTC...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGGTGTTCATGAGACAGTaGGTTACTGAGAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRVFMRQ*VTESSR
Trigger: CCGTGAGCTCTCAGTAACTCACTGTCTCATGAACAC...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGAGAGGAGTTGAGTCTTaGTGTCGGCTTTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRRGVES*CRLCPV
Trigger: CACAGGACAAAGCCGACATCAAGACTCAACTCCTCT...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAAAGGTAGGAAGAGGATaGTGGCTGCTGCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGKVGRG*WLLPSE
Trigger: CTCTGAAGGCAGCAGCCATCATCCTCTTCCTACCTT...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGGCTGGACTGACCTTCTaGGAGAGGGTCAACATGGCT +
Preference number: 4 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELAGLTF*ERVNMA
Trigger: AGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGC...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGCATGAGCGGCAGTaGCACCAAGACCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPMHERQ*HQDPFP
Trigger: TGGGAAAGGGTCTTGGTGTCACTGCCGCTCATGCAT...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTCCAGCACTTGGCAATaGGAACTAGATGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGSSTWQ*ELDGQH
Trigger: GTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGA...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTAGGGCTGAGCCTAAATaGGCTGGGTTGATGTTAAGG +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGRAEPK*AGLMLR
Trigger: CCTTAACATCAACCCAGCTCATTTAGGCTCAGCCCT...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCGCCCTGGGTGCCCCCTaGGGTCCATATATAGGTTTA +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCALGAP*GPYIGL
Trigger: TAAACCTATATATGGACCTCAGGGGGCACCCAGGGC...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCACCCGGCCACCTCCTGTaGAGGTGCGCTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPPGHLL*RCAPHS
Trigger: ACTATGTGGAGCGCACCTTCACAGGAGGTGGCCGGG...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537864.5
CDS-3UTR GCA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTATCAGGGCCACCACGTaGTCTCCTGTGAAGGTGCGC +
Preference number: 4 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPIRATT*SPVKVR
Trigger: GCGCACCTTCACAGGAGAGCACGTGGTGGCCCTGAT...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTGTGCGTGCTGCAGGCTaGCCACCTCGGGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCVRAAG*PPRASG
Trigger: CCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCAC...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGGCTCGGGATGCAGGATaGAGCCATGCGTGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: WFLGATALAQASPCPGEAARDAG*SHACRH
Trigger: ATGCCTACACGCATGGCTGCATCCTGCATCCCGAGC...CGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTGTGGTGAGCTCGGGATaGAGGATGCAGCCATGCGTG +
Preference number: 4 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPVVSSG*RMQPCV
Trigger: CACGCATGGCTGCATCCTGCATCCCGAGCTCACCAC...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTAGGAACTTGAGGCGGTaGAGGGTGGCTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGRNLRR*RVAPRR
Trigger: CCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCT...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCGCAGGTTGGGCCGGCTaGCATCTTCCCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPAGWAG*HLPSIS
Trigger: AGAAATACTGGGAAGATGGCAGCCGGCCCAACCTGC...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAACTCTCAAAGAAGGACTaGAGGTTGGGCCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: AWFLGATALAQASPCPGELSKKD*RLGRLP
Trigger: TGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAG...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTCTCCAGATCCGCCCCTaGACTTGGGCTGGACTGACC +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGLQIRP*TWAGLT
Trigger: GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAG...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGGGCATGTGCCCTGGGTaGCCCCTGAGGTCCATATAT +
Preference number: 4 (lower is better)
Translates to: WFLGATALAQASPCPGEAGMCPG*PLRSIY
Trigger: ATATATGGACCTCAGGGGGCACCCAGGGCACATGCC...CGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGGTCGGGGGCCTCCGCTaGCTTGGCCGCATCGCTCTC +
Preference number: 4 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEVGGLR*LGRIAL
Trigger: GAGAGCGATGCGGCCAAGCCAGCGGAGGCCCCCGAC...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCATGATGTTGTCGCGGTaGATGATGACGGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCMMLSR*MMTGTS
Trigger: GGAGGTGCCCGTCATCATCCACCGCGACAACATCAT...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCACGGCCGTGGCGTACTTaGGGATCATGGAGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPRPWRT*GSWSRW
Trigger: CCACCGACTCCATGATCCCCAAGTACGCCACGGCCG...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTCGGCCGTGGCGTACTTaGGGATCATGGAGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGRPWRT*GSWSRW
Trigger: CCACCGACTCCATGATCCCCAAGTACGCCACGGCCG...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTTGCGGATCTCGGCCGTaGCGTACTTGGGGATCATGG +
Preference number: 4 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLCGSRP*RTWGSW
Trigger: CCATGATCCCCAAGTACGCCACGGCCGAGATCCGCA...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCGGTCCGTGGTGGCATTaGCTAAATGTCTGCGGATCT +
Preference number: 4 (lower is better)
Translates to: WVPLPWLKLVHVQEKREAGPWWH*LNVCGS
Trigger: AGATCCGCAGACATTTAGCCAATGCCACCACGGACC...GGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGAGAAGGACTGCAGGTTaGGCCGGCTGCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQRRTAG*AGCHLP
Trigger: GGGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCT...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACGACAGCAGGGTGGTGTaGATGTCACCCAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYDSRVV*MSPRTF
Trigger: GAAAGTCCTGGGTGACATCCACACCACCCTGCTGTC...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTGGACGAAACATCCTaGGACTCACCTCAGATCCTA +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPVDETS*DSPQIL
Trigger: TAGGATCTGAGGTGAGTCCCAGGATGTTTCGTCCAC...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAACCAGAATCTGGGCCCTaGTGGACGAAACATCCTGGG +
Preference number: 4 (lower is better)
Translates to: AWFLGATALAQASPCPGEPESGP*WTKHPG
Trigger: CCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGG...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGGCACCTCCCAGAATCTaGGCCCTGGTGGACGAAACA +
Preference number: 4 (lower is better)
Translates to: WFLGATALAQASPCPGEAAPPRI*ALVDET
Trigger: TGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTGC...CGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGGTCGGCTTTGTCCTGTaGAAGAGTTCCCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELVGFVL*KSSLGK
Trigger: CTTGCCCAGGGAACTCTTCCACAGGACAAAGCCGAC...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTCGGCTTTGTCCTGTaGAAGAGTTCCCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SDLQGPPMGSPVIQPHSEVGFVL*KSSLGK
Trigger: CTTGCCCAGGGAACTCTTCCACAGGACAAAGCCGAC...CTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACTGGGTGCCACTGCCTTaGCTCAAGCTAGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYWVPLP*LKLVHV
Trigger: GACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGTCCCCACTGCAGCCTaGTTTTTGGGTGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQVPTAA*FLGATA
Trigger: GGCAGTGGCACCCAAAAACCAGGCTGCAGTGGGGAC...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGAGTCCCCACTGCAGCCTaGTTTTTGGGTGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: ELLRAHGESHSTETPTVRVPTAA*FLGATA
Trigger: GGCAGTGGCACCCAAAAACCAGGCTGCAGTGGGGAC...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAGAGGGTGTGCTCATaGTATCCGTCCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRERVCS*YPSPLQ
Trigger: CTGCAGTGGGGACGGATACCATGAGCACACCCTCTC...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGCCCCTGCACTTGGGCTaGACTGACCTTCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: WFLGATALAQASPCPGEAPLHLG*TDLLRE
Trigger: CTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG...CGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACTTGAAGGAGATGGCTTaGACAGAGGCTAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYLKEMA*TEARRG
Trigger: CCCCCTCCTAGCCTCTGTCCAAGCCATCTCCTTCAA...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGTTGAAGGAGATGGCTTaGACAGAGGCTAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELLKEMA*TEARRG
Trigger: CCCCCTCCTAGCCTCTGTCCAAGCCATCTCCTTCAA...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGCTGGGGTGGGTGGCATaGATGCAGAGACTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQLGWVA*MQRLPR
Trigger: GCGGGGAAGTCTCTGCATCCATGCCACCCACCCCAG...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGCCCGACTGGGGTGGGTaGCATGGATGCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQPDWGG*HGCRDF
Trigger: GAAGTCTCTGCATCCATGCCACCCACCCCAGTCGGG...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTAAGGTCAGAGCCCTaGAAAGTCAGTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRLRSEP*KVSLEA
Trigger: GGCTTCCAGACTGACTTTCCAGGGCTCTGACCTTAA...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTTCTGGGAAATTGGGGTaGGGGGCATGTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLSGKLG*GACALG
Trigger: ACCCAGGGCACATGCCCCCCACCCCAATTTCCCAGA...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR CAA 72 bp GTGCTCATGGTATCCGTCCCCACTGCAGCCTGGTTTTaGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: VLMVSVPTAAWF*GATALAQASPC
Trigger: ACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGCTGCAGTGGGGACGGATACCATGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTATGGGGGTTTCCTCTTaGCCAGCCGGAAAGCATTGG +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRMGVSS*PAGKHW
Trigger: CCAATGCTTTCCGGCTGGTCAAGAGGAAACCCCCAT...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCGAGACAGTGAGTTACTaGGAGCTCACGGGGAATCAC +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPETVSY*ELTGNH
Trigger: GTGATTCCCCGTGAGCTCTCAGTAACTCACTGTCTC...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGTAGAGCCGTGGCCTTaGGTCACAGCATTGGCAACG +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQVEPWP*VTALAT
Trigger: CGTTGCCAATGCTGTGACTCAAGGCCACGGCTCTAC...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGAGGAGTTGAGTCTTaGTGTCGGCTTTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSRGVES*CRLCPV
Trigger: CACAGGACAAAGCCGACATCAAGACTCAACTCCTCT...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGAAGGTAGGAAGAGGATaGTGGCTGCTGCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELKVGRG*WLLPSE
Trigger: CTCTGAAGGCAGCAGCCATCATCCTCTTCCTACCTT...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGAAGGTAGGAAGAGGATaGTGGCTGCTGCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMKVGRG*WLLPSE
Trigger: CTCTGAAGGCAGCAGCCATCATCCTCTTCCTACCTT...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCCCTGCACTTGGGCTGGACTGACCTTCTGAGAGAGGGTCAACATGGCTTTTACGCTGGACTGACCTTCTaGGAGAGGGTCAACATGGCT +
Preference number: 4 (lower is better)
Translates to: PLHLGWTDLLREGQHGFYAGLTF*ERVNMA
Trigger: AGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGC...GTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGAAAAGGCACAGGAAAGTaGGACCCGACTGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: ELLRAHGESHSTETPTVRKGTGK*DPTGVG
Trigger: ACCCACCCCAGTCGGGTCTCACTTTCCTGTGCCTTT...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTATGCATGAGCGGCAGTaGCACCAAGACCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRMHERQ*HQDPFP
Trigger: TGGGAAAGGGTCTTGGTGTCACTGCCGCTCATGCAT...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTCCAGACCCAGCAACTTaGGACAGGCAGTCAACTCTT +
Preference number: 4 (lower is better)
Translates to: PLPWLKLVHVQEKREAPSPDPAT*DRQSTL
Trigger: AAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGG...AGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGAAGATGGGCCACCAGCTaGAGTTGGTGGGGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: ELLRAHGESHSTETPTVRRWATS*SWWGSD
Trigger: ATCTGACCCCCACCAACTGCAGCTGGTGGCCCATCT...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR GCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTATCAGGGCCACCACGTaGTCTCCTGTGAAGGTGCGC +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGIRATT*SPVKVR
Trigger: GCGCACCTTCACAGGAGAGCACGTGGTGGCCCTGAT...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTGTACTGCAGCACCCGTaGGTGCTGCAGGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCVLQHP*VLQAAH
Trigger: GTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTAC...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGCTCGGGATGCAGGATaGAGCCATGCGTGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQARDAG*SHACRH
Trigger: ATGCCTACACGCATGGCTGCATCCTGCATCCCGAGC...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCAGGAACTTGAGGCGGTaGAGGGTGGCTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTRNLRR*RVAPRR
Trigger: CCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCT...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCAGGAACTTGAGGCGGTaGAGGGTGGCTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGRNLRR*RVAPRR
Trigger: CCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCT...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCTCTCAAAGAAGGACTaGAGGTTGGGCCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPLSKKD*RLGRLP
Trigger: TGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAG...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTGGTATCCGTCCCCACTaGAGCCTGGTTTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLGIRPH*SLVFGC
Trigger: GCACCCAAAAACCAGGCTGCAGTGGGGACGGATACC...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCGACAATGAGAGGGTGTaGTCATGGTATCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSDNERV*SWYPSP
Trigger: TGGGGACGGATACCATGAGCACACCCTCTCATTGTC...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCGACAATGAGAGGGTGTaGTCATGGTATCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPDNERV*SWYPSP
Trigger: TGGGGACGGATACCATGAGCACACCCTCTCATTGTC...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTGGTGGGTGGCATGGATaGAGAGACTTCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGGGWHG*RDFPAL
Trigger: GAGAGCGGGGAAGTCTCTGCATCCATGCCACCCACC...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGACCAGCTGCAGTTGGTaGGGGTCAGATTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQTSCSW*GSDCWG
Trigger: CCCCCAACAATCTGACCCCCACCAACTGCAGCTGGT...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp TGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGAAGGACTGGGTCCAGTaGTACAGAACCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: WFLGATALAQASPCPGEAKDWVQ*YRTRLS
Trigger: GGAGAGCCTGGTTCTGTACCACTGGACCCAGTCCTT...CGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CCA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTTCTGGTCCAGCACCATaGCCAGTTCCCCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPSGPAP*PVPRGS
Trigger: AGATCCTCGGGGAACTGGCCATGGTGCTGGACCAGA...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGAGCTCCGCCTCAATCTaGTCCAGCACCATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQSSASI*SSTMAS
Trigger: ACTGGCCATGGTGCTGGACCAGATTGAGGCGGAGCT...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCAAGGCAAAGCGTCTCTaGACCCTCTCAAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: WVPLPWLKLVHVQEKREAKAKRL*TLSKKD
Trigger: GTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTT...GGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCCCTGCACTTGGGCTGGACTGACCTTCTGAGAGAGGGTCAACATGGCTTTTACGACAGCAGGGTGGTGTaGATGTCACCCAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: PLHLGWTDLLREGQHGFYDSRVV*MSPRTF
Trigger: GAAAGTCCTGGGTGACATCCACACCACCCTGCTGTC...GTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCCGGCCGACAGCAGGGTaGTGTGGATGTCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGRPTAG*CGCHPG
Trigger: TCCTGGGTGACATCCACACCACCCTGCTGTCGGCCG...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCGCCCCGAAGAAGGATaGGGGTTTCCTCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPRPEEG*GFPLDQ
Trigger: CTGGTCAAGAGGAAACCCCCATCCTTCTTCGGGGCG...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACGCCCCGAAGAAGGATaGGGGTTTCCTCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: ELLRAHGESHSTETPTVRRPEEG*GFPLDQ
Trigger: CTGGTCAAGAGGAAACCCCCATCCTTCTTCGGGGCG...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCGTGGACGAAACATCCTaGGACTCACCTCAGATCCTA +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSVDETS*DSPQIL
Trigger: TAGGATCTGAGGTGAGTCCCAGGATGTTTCGTCCAC...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGAGTGGACGAAACATCCTaGGACTCACCTCAGATCCTA +
Preference number: 4 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRVDETS*DSPQIL
Trigger: TAGGATCTGAGGTGAGTCCCAGGATGTTTCGTCCAC...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTTTCAGGGACCTCCCATaGGGTCTCCGGTTATCCAGC +
Preference number: 4 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLFRDLP*GLRLSS
Trigger: GCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAA...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGATTCAGGGACCTCCCATaGGGTCTCCGGTTATCCAGC +
Preference number: 4 (lower is better)
Translates to: ELLRAHGESHSTETPTVRFRDLP*GLRLSS
Trigger: GCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAA...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTTGGGTGCCACTGCCTTaGCTCAAGCTAGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRWVPLP*LKLVHV
Trigger: GACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGAGAGGGTGTGCTCATaGTATCCGTCCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQERVCS*YPSPLQ
Trigger: CTGCAGTGGGGACGGATACCATGAGCACACCCTCTC...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACCCCTGCACTTGGGCTaGACTGACCTTCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ELLRAHGESHSTETPTVRPLHLG*TDLLRE
Trigger: CTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTATTGGGGCTTTTGGTaGTTTCTATGCATGAGCGGC +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGYWGFW*FLCMSG
Trigger: GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATA...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGATGAGTCACTACACCTaGCCCTTGCACAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRMSHYT*PLHRLM
Trigger: CATTAACCTGTGCAAGGGCCAGGTGTAGTGACTCAT...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTATGAGTCACTACACCTaGCCCTTGCACAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGMSHYT*PLHRLM
Trigger: CATTAACCTGTGCAAGGGCCAGGTGTAGTGACTCAT...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGTCTGGGAAATTGGGGTaGGGGGCATGTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQSGKLG*GACALG
Trigger: ACCCAGGGCACATGCCCCCCACCCCAATTTCCCAGA...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTACAGTCCCAGGAACTTaGGGCGGTGCAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCTVPGT*GGAGWL
Trigger: GAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGT...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGGTAGAGCCGTGGCCTTaGGTCACAGCATTGGCAACG +
Preference number: 4 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQVEPWP*VTALAT
Trigger: CGTTGCCAATGCTGTGACTCAAGGCCACGGCTCTAC...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGAGAGGGAAGGGGAGGTaGGGGGTCAGGCCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QLFLLDALLGLLVVSMHERGKGR*GVRPSE
Trigger: CTCAGAGGGCCTGACCCCTCACCTCCCCTTCCCTCT...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGAGAGGAGTTGAGTCTTaGTGTCGGCTTTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMRGVES*CRLCPV
Trigger: CACAGGACAAAGCCGACATCAAGACTCAACTCCTCT...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACAGAGGAGTTGAGTCTTaGTGTCGGCTTTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYRGVES*CRLCPV
Trigger: CACAGGACAAAGCCGACATCAAGACTCAACTCCTCT...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGAAATCAGAAGGACAATaGGAGGGTGTGCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPKSEGQ*EGVLMV
Trigger: TACCATGAGCACACCCTCTCATTGTCCTTCTGATTT...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCCAACATGGCTTTTACTaGAAGTCCCACCTCACAGGG +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCQHGFY*KSHLTG
Trigger: CCCTGTGAGGTGGGACTTTCAGTAAAAGCCATGTTG...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTATCCAGCACTTGGCAATaGGAACTAGATGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: DLQGPPMGSPVIQPHSEVSSTWQ*ELDGQH
Trigger: GTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGA...TACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTCCAGACCCAGCAACTTaGGACAGGCAGTCAACTCTT +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRPDPAT*DRQSTL
Trigger: AAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGG...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGAGGGCTGAGCCTAAATaGGCTGGGTTGATGTTAAGG +
Preference number: 4 (lower is better)
Translates to: SDLQGPPMGSPVIQPHSERAEPK*AGLMLR
Trigger: CCTTAACATCAACCCAGCTCATTTAGGCTCAGCCCT...CTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGAGGGCTGAGCCTAAATaGGCTGGGTTGATGTTAAGG +
Preference number: 4 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELRAEPK*AGLMLR
Trigger: CCTTAACATCAACCCAGCTCATTTAGGCTCAGCCCT...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGAGCCCTGGGTGCCCCCTaGGGTCCATATATAGGTTTA +
Preference number: 4 (lower is better)
Translates to: ELLRAHGESHSTETPTVRALGAP*GPYIGL
Trigger: TAAACCTATATATGGACCTCAGGGGGCACCCAGGGC...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGAGCAGCTCCCGGTACTaGAGCACCCGTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QLFLLDALLGLLVVSMHESSSRY*STRACC
Trigger: GCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCT...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGAAGAGGATGATGGCTaGTGCCTTCAGAGATTTCTA +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPEEDDG*CLQRFL
Trigger: TAGAAATCTCTGAAGGCAGCAGCCATCATCCTCTTC...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCGACCCTTTCCCAACATaGAAAAGGCACAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSDPFPT*KRHRKV
Trigger: CACTTTCCTGTGCCTTTTGCATGTTGGGAAAGGGTC...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCTTTTGGTGGTTTCTATaGATGAGCGGCAGTGACACC +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSFWWFL*MSGSDT
Trigger: GGTGTCACTGCCGCTCATGCATAGAAACCACCAAAA...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTGACAGCAGGGTGGTGTaGATGTCACCCAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCDSRVV*MSPRTF
Trigger: GAAAGTCCTGGGTGACATCCACACCACCCTGCTGTC...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACGTGGACGAAACATCCTaGGACTCACCTCAGATCCTA +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYVDETS*DSPQIL
Trigger: TAGGATCTGAGGTGAGTCCCAGGATGTTTCGTCCAC...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGTGGGTGCCACTGCCTTaGCTCAAGCTAGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQWVPLP*LKLVHV
Trigger: GACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCACCCCTGCACTTGGGCTaGACTGACCTTCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPPLHLG*TDLLRE
Trigger: CTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTTTGAAGGAGATGGCTTaGACAGAGGCTAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPLKEMA*TEARRG
Trigger: CCCCCTCCTAGCCTCTGTCCAAGCCATCTCCTTCAA...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCAAAAGTGAGACCCGACTaGGGTGGGTGGCATGGATGC +
Preference number: 4 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPKVRPD*GGWHGC
Trigger: GCATCCATGCCACCCACCCCAGTCGGGTCTCACTTT...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCACATCTCTACCCTTCTaGCTCCAGCACTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPTSLPF*LQHLAM
Trigger: CATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGATGT...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTAACATCTCTACCCTTCTaGCTCCAGCACTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: DLQGPPMGSPVIQPHSEVTSLPF*LQHLAM
Trigger: CATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGATGT...TACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCACCTGGAAAGTCAGTCTaGAAGCCAGCCCCAGACCCA +
Preference number: 4 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPPGKSV*KPAPDP
Trigger: TGGGTCTGGGGCTGGCTTCCAGACTGACTTTCCAGG...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGTTAAGGTCAGAGCCCTaGAAAGTCAGTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SDLQGPPMGSPVIQPHSELRSEP*KVSLEA
Trigger: GGCTTCCAGACTGACTTTCCAGGGCTCTGACCTTAA...CTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCATGAGTCACTACACCTaGCCCTTGCACAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSMSHYT*PLHRLM
Trigger: CATTAACCTGTGCAAGGGCCAGGTGTAGTGACTCAT...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTGCACCTTCTGCGAGCTaGAGGACTGGGTCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCAPSAS*RTGSSG
Trigger: ACCACTGGACCCAGTCCTTCAGCTCGCAGAAGGTGC...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR TCA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGAGAGACAGTGAGTTACTaGGAGCTCACGGGGAATCAC +
Preference number: 4 (lower is better)
Translates to: ELLRAHGESHSTETPTVRETVSY*ELTGNH
Trigger: GTGATTCCCCGTGAGCTCTCAGTAACTCACTGTCTC...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAAAATCAGAAGGACAATaGGAGGGTGTGCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGKSEGQ*EGVLMV
Trigger: TACCATGAGCACACCCTCTCATTGTCCTTCTGATTT...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAACAACATGGCTTTTACTaGAAGTCCCACCTCACAGGG +
Preference number: 4 (lower is better)
Translates to: AWFLGATALAQASPCPGEQHGFY*KSHLTG
Trigger: CCCTGTGAGGTGGGACTTTCAGTAAAAGCCATGTTG...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCAAAGGCACAGGAAAGTaGGACCCGACTGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGKGTGK*DPTGVG
Trigger: ACCCACCCCAGTCGGGTCTCACTTTCCTGTGCCTTT...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTTGCTTGCTCTTGTaGAGAACTGAGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGSCLLL*RTETET
Trigger: GGTTTCAGTCTCAGTTCTTCACAAGAGCAAGCAAGA...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCTCTTGCTTGCTCTTGTaGAGAACTGAGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSSCLLL*RTETET
Trigger: GGTTTCAGTCTCAGTTCTTCACAAGAGCAAGCAAGA...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCCAGACCCAGCAACTTaGGACAGGCAGTCAACTCTT +
Preference number: 4 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLPDPAT*DRQSTL
Trigger: AAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGG...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAAGGGCTGAGCCTAAATaGGCTGGGTTGATGTTAAGG +
Preference number: 4 (lower is better)
Translates to: AWFLGATALAQASPCPGERAEPK*AGLMLR
Trigger: CCTTAACATCAACCCAGCTCATTTAGGCTCAGCCCT...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGTGCGTGCTGCAGGCTaGCCACCTCGGGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: RWETEFQRGENLTTFTKLVRAAG*PPRASG
Trigger: CCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCAC...TAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR GCA 90 bp TATAGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGAGCACCCGTGCGTGCTaGAGGCTGCCCACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: YRWETEFQRGENLTTFTKSTRAC*RLPTSG
Trigger: GCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCT...CTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR GCA 90 bp AGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTATGCAGCACCCGTGCGTaGTGCAGGCTGCCCACCTCG +
Preference number: 4 (lower is better)
Translates to: RWETEFQRGENLTTFTKLCSTRA*CRLPTS
Trigger: CGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCA...TAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR GCA 90 bp TGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGGAAGCAGCTCCCGGTACTaGAGCACCCGTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: WETEFQRGENLTTFTKLGSSSRY*STRACC
Trigger: GCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCT...TCCTAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR GCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCGGTATCCGTCCCCACTaGAGCCTGGTTTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTGIRPH*SLVFGC
Trigger: GCACCCAAAAACCAGGCTGCAGTGGGGACGGATACC...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCGACCCTTTCCCAACATaGAAAAGGCACAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSDPFPT*KRHRKV
Trigger: CACTTTCCTGTGCCTTTTGCATGTTGGGAAAGGGTC...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCGACCCTTTCCCAACATaGAAAAGGCACAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCDPFPT*KRHRKV
Trigger: CACTTTCCTGTGCCTTTTGCATGTTGGGAAAGGGTC...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCTTTTGGTGGTTTCTATaGATGAGCGGCAGTGACACC +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSFWWFL*MSGSDT
Trigger: GGTGTCACTGCCGCTCATGCATAGAAACCACCAAAA...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCAATGATGTTGTCGCGGTaGATGATGACGGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPMMLSR*MMTGTS
Trigger: GGAGGTGCCCGTCATCATCCACCGCGACAACATCAT...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCAGCTCCGCCTCAATCTaGTCCAGCACCATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTSSASI*SSTMAS
Trigger: ACTGGCCATGGTGCTGGACCAGATTGAGGCGGAGCT...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTAAGGCAAAGCGTCTCTaGACCCTCTCAAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRKAKRL*TLSKKD
Trigger: GTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTT...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCCGACAGCAGGGTaGTGTGGATGTCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: QLFLLDALLGLLVVSMHERPTAG*CGCHPG
Trigger: TCCTGGGTGACATCCACACCACCCTGCTGTCGGCCG...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCCGCCCCGAAGAAGGATaGGGGTTTCCTCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGRPEEG*GFPLDQ
Trigger: CTGGTCAAGAGGAAACCCCCATCCTTCTTCGGGGCG...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGCTTGAGTCACAGCATTaGCAACGTCTACTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPLESQH*QRLLLN
Trigger: GTTTAGAAGTAGACGTTGCCAATGCTGTGACTCAAG...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCGCCAAACCCAACACATaGACCAAATCAGAAGGACAA +
Preference number: 4 (lower is better)
Translates to: WVPLPWLKLVHVQEKREAAKPNT*TKSEGQ
Trigger: TTGTCCTTCTGATTTGGTCCATGTGTTGGGTTTGGC...GGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTCTCTCCCCGGCTCCATaGCACCGTGTAGTACAGGGA +
Preference number: 4 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCLSPAP*HRVVQG
Trigger: TCCCTGTACTACACGGTGCCATGGAGCCGGGGAGAG...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGTATTGGGGCTTTTGGTaGTTTCTATGCATGAGCGGC +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMYWGFW*FLCMSG
Trigger: GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATA...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGCTTTATTGGGGCTTTTaGTGGTTTCTATGCATGAGC +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPLYWGF*WFLCMS
Trigger: GCTCATGCATAGAAACCACCAAAAGCCCCAATAAAG...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGATGAGTCACTACACCTaGCCCTTGCACAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMMSHYT*PLHRLM
Trigger: CATTAACCTGTGCAAGGGCCAGGTGTAGTGACTCAT...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCACTTGAACTCCTGGCCTaGAGCAATTCTCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPLELLA*SNSPAL
Trigger: CAAGGCGGGAGAATTGCTCCAGGCCAGGAGTTCAAG...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGGAAGTCACCTCCCCCAGGGCTaGCACCCACCCTCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: ETEFQRGENLTTFTKLGSHLPQG*HPPSFS
Trigger: GGAGAACGAGGGTGGGTGCCAGCCCTGGGGGAGGTG...ACTTCCTAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR TCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCATGGGGGTTTCCTCTTaGCCAGCCGGAAAGCATTGG +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTMGVSS*PAGKHW
Trigger: CCAATGCTTTCCGGCTGGTCAAGAGGAAACCCCCAT...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTCTGTCCAAGTGTTCATaGGACAGTGAGTTACTGAGA +
Preference number: 4 (lower is better)
Translates to: PLPWLKLVHVQEKREAPSLSKCS*DSELLR
Trigger: TCTCAGTAACTCACTGTCTCATGAACACTTGGACAG...AGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGTCCATCTTGAGACCTTaGATCGATAGAAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPSILRP*IDRKGI
Trigger: AATGCCTTTTCTATCGATTCAAGGTCTCAAGATGGA...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGAAATCAGAAGGACAATaGGAGGGTGTGCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMKSEGQ*EGVLMV
Trigger: TACCATGAGCACACCCTCTCATTGTCCTTCTGATTT...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTCAACATGGCTTTTACTaGAAGTCCCACCTCACAGGG +
Preference number: 4 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCQHGFY*KSHLTG
Trigger: CCCTGTGAGGTGGGACTTTCAGTAAAAGCCATGTTG...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCTCTTGCTTGCTCTTGTaGAGAACTGAGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCSCLLL*RTETET
Trigger: GGTTTCAGTCTCAGTTCTTCACAAGAGCAAGCAAGA...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTCCAGACCCAGCAACTTaGGACAGGCAGTCAACTCTT +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGPDPAT*DRQSTL
Trigger: AAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGG...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTTCCACAGTTCCATCTTaGGACTTTCCGGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRSTVPS*DFPEGK
Trigger: TTTGCCTTCCGGAAAGTCTCAAGATGGAACTGTGGA...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447658.1
CDS-3UTR GCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGGTGGTGAGCTCGGGATaGAGGATGCAGCCATGCGTG +
Preference number: 4 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEVVSSG*RMQPCV
Trigger: CACGCATGGCTGCATCCTGCATCCCGAGCTCACCAC...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCGCAGGTTGGGCCGGCTaGCATCTTCCCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGAGWAG*HLPSIS
Trigger: AGAAATACTGGGAAGATGGCAGCCGGCCCAACCTGC...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCAGACAATGAGAGGGTGTaGTCATGGTATCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPDNERV*SWYPSP
Trigger: TGGGGACGGATACCATGAGCACACCCTCTCATTGTC...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCGAGGATGATGGCTGCTaGCTTCAGAGATTTCTACTA +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSEDDGC*LQRFLL
Trigger: TAGTAGAAATCTCTGAAGGCAGCAGCCATCATCCTC...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCGAAGAGGATGATGGCTaGTGCCTTCAGAGATTTCTA +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPEEDDG*CLQRFL
Trigger: TAGAAATCTCTGAAGGCAGCAGCCATCATCCTCTTC...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTAAAGGGTTGTACACATaGCCTGTAACCTGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: PLPWLKLVHVQEKREAPSKGLYT*PVTCKG
Trigger: CCCTTTACAGGTTACAGGGCATGTGTACAACCCTTT...AGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCAAAGGGTTGTACACATaGCCTGTAACCTGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCKGLYT*PVTCKG
Trigger: CCCTTTACAGGTTACAGGGCATGTGTACAACCCTTT...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACAAAGGGTTGTACACATaGCCTGTAACCTGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYKGLYT*PVTCKG
Trigger: CCCTTTACAGGTTACAGGGCATGTGTACAACCCTTT...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGGACTTGTGCTCGCTCTGTaGCAGGCTCACGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: WETEFQRGENLTTFTKLGLVLAL*QAHVPL
Trigger: GAGCGGGACGTGAGCCTGCCACAGAGCGAGCACAAG...TCCTAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR CCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCATGATGTTGTCGCGGTaGATGATGACGGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTMMLSR*MMTGTS
Trigger: GGAGGTGCCCGTCATCATCCACCGCGACAACATCAT...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTGGTCCGTGGTGGCATTaGCTAAATGTCTGCGGATCT +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGGPWWH*LNVCGS
Trigger: AGATCCGCAGACATTTAGCCAATGCCACCACGGACC...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CCA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCAGGTCCGTGGTGGCATTaGCTAAATGTCTGCGGATCT +
Preference number: 4 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPGPWWH*LNVCGS
Trigger: AGATCCGCAGACATTTAGCCAATGCCACCACGGACC...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CCA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTAAGGCAAAGCGTCTCTaGACCCTCTCAAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPKAKRL*TLSKKD
Trigger: GTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTT...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGAAGGCAAAGCGTCTCTaGACCCTCTCAAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQKAKRL*TLSKKD
Trigger: GTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTT...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGACTTGAGTCACAGCATTaGCAACGTCTACTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGLESQH*QRLLLN
Trigger: GTTTAGAAGTAGACGTTGCCAATGCTGTGACTCAAG...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGGGTGCCACTGCCTTaGCTCAAGCTAGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTWVPLP*LKLVHV
Trigger: GACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCGCCAAACCCAACACATaGACCAAATCAGAAGGACAA +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCAKPNT*TKSEGQ
Trigger: TTGTCCTTCTGATTTGGTCCATGTGTTGGGTTTGGC...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACGCCAAACCCAACACATaGACCAAATCAGAAGGACAA +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYAKPNT*TKSEGQ
Trigger: TTGTCCTTCTGATTTGGTCCATGTGTTGGGTTTGGC...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTAGAGAGAGGGTCAACATaGCTTTTACTGAAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: DLQGPPMGSPVIQPHSEVERGST*LLLKVP
Trigger: TGGGACTTTCAGTAAAAGCCATGTTGACCCTCTCTC...TACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCGAGAGAGGGTCAACATaGCTTTTACTGAAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPERGST*LLLKVP
Trigger: TGGGACTTTCAGTAAAAGCCATGTTGACCCTCTCTC...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCTTGAAGGAGATGGCTTaGACAGAGGCTAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGLKEMA*TEARRG
Trigger: CCCCCTCCTAGCCTCTGTCCAAGCCATCTCCTTCAA...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGACTTTATTGGGGCTTTTaGTGGTTTCTATGCATGAGC +
Preference number: 4 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRLYWGF*WFLCMS
Trigger: GCTCATGCATAGAAACCACCAAAAGCCCCAATAAAG...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCTCCTGGATGCTTTATTaGGGCTTTTGGTGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: WVPLPWLKLVHVQEKREASWMLY*GFWWFL
Trigger: TAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGA...GGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTAAGCAACTGTTCCTCCTaGATGCTTTATTGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: DLQGPPMGSPVIQPHSEVSNCSS*MLYWGF
Trigger: AAAGCCCCAATAAAGCATCCAGGAGGAACAGTTGCT...TACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGAGCAACTGTTCCTCCTaGATGCTTTATTGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMSNCSS*MLYWGF
Trigger: AAAGCCCCAATAAAGCATCCAGGAGGAACAGTTGCT...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTTTAAGGTCAGAGCCCTaGAAAGTCAGTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPLRSEP*KVSLEA
Trigger: GGCTTCCAGACTGACTTTCCAGGGCTCTGACCTTAA...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTTTAAGGTCAGAGCCCTaGAAAGTCAGTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCLRSEP*KVSLEA
Trigger: GGCTTCCAGACTGACTTTCCAGGGCTCTGACCTTAA...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCCACGTGCTCTCCTGTaGAGGTGCGCTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEPRALL*RCAPHS
Trigger: ACTATGTGGAGCGCACCTTCACAGGAGAGCACGTGG...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTCATGGTCCAGTTTCATaGGGTCCGTGGTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCHGPVS*GPWWHW
Trigger: CCAATGCCACCACGGACCTCATGAAACTGGACCATG...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR TCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTCTGTCCAAGTGTTCATaGGACAGTGAGTTACTGAGA +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRLSKCS*DSELLR
Trigger: TCTCAGTAACTCACTGTCTCATGAACACTTGGACAG...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGATCCATCTTGAGACCTTaGATCGATAGAAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGSILRP*IDRKGI
Trigger: AATGCCTTTTCTATCGATTCAAGGTCTCAAGATGGA...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACTCCACAGTTCCATCTTaGGACCTTGAATCGATAGAA +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYSTVPS*DLESIE
Trigger: TTCTATCGATTCAAGGTCTCAAGATGGAACTGTGGA...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGCAACATGGCTTTTACTaGAAGTCCCACCTCACAGGG +
Preference number: 4 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQQHGFY*KSHLTG
Trigger: CCCTGTGAGGTGGGACTTTCAGTAAAAGCCATGTTG...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTGCTGGACTGACCTTCTaGGAGAGGGTCAACATGGCT +
Preference number: 4 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCAGLTF*ERVNMA
Trigger: AGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGC...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGAAAGGCACAGGAAAGTaGGACCCGACTGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEKGTGK*DPTGVG
Trigger: ACCCACCCCAGTCGGGTCTCACTTTCCTGTGCCTTT...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCGGTGGTTTCTATGCATaGGCGGCAGTGACACCAAGA +
Preference number: 4 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGGGFYA*AAVTPR
Trigger: TCTTGGTGTCACTGCCGCTCATGCATAGAAACCACC...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCGGTGGTTTCTATGCATaGGCGGCAGTGACACCAAGA +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTGGFYA*AAVTPR
Trigger: TCTTGGTGTCACTGCCGCTCATGCATAGAAACCACC...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGTCCAGCACTTGGCAATaGGAACTAGATGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQSSTWQ*ELDGQH
Trigger: GTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGA...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TATAGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGGTACTGCAGCACCCGTaGGTGCTGCAGGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: YRWETEFQRGENLTTFTKVLQHP*VLQAAH
Trigger: GTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTAC...CTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR GCA 90 bp GAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGGAAGTGGCATCCATGGGCAGTaGGTCCAGCAGCTCCCGGTA +
Preference number: 4 (lower is better)
Translates to: ETEFQRGENLTTFTKLGSGIHGQ*VQQLPV
Trigger: TACCGGGAGCTGCTGGACGCACTGCCCATGGATGCC...ACTTCCTAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR GCA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGAGGATGATGGCTGCTaGCTTCAGAGATTTCTACTA +
Preference number: 4 (lower is better)
Translates to: AWFLGATALAQASPCPGEEDDGC*LQRFLL
Trigger: TAGTAGAAATCTCTGAAGGCAGCAGCCATCATCCTC...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTACTGTTCCTCCTGGATaGTTTATTGGGGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRTVPPG*FIGAFG
Trigger: ACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGT...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGCAGTCAACTCTTGCTTaGTCTTGTGAAGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMQSTLA*SCEELR
Trigger: TCTCAGTTCTTCACAAGAGCAAGCAAGAGTTGACTG...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCCAGTCAACTCTTGCTTaGTCTTGTGAAGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCQSTLA*SCEELR
Trigger: TCTCAGTTCTTCACAAGAGCAAGCAAGAGTTGACTG...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTACGGCCGTGGCGTACTTaGGGATCATGGAGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: RWETEFQRGENLTTFTKLRPWRT*GSWSRW
Trigger: CCACCGACTCCATGATCCCCAAGTACGCCACGGCCG...TAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR CCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCCTTGAGTCACAGCATTaGCAACGTCTACTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSLESQH*QRLLLN
Trigger: GTTTAGAAGTAGACGTTGCCAATGCTGTGACTCAAG...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGGCACCTCCCAGAATCTaGGCCCTGGTGGACGAAACA +
Preference number: 4 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEAPPRI*ALVDET
Trigger: TGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTGC...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGTATTGGGGCTTTTGGTaGTTTCTATGCATGAGCGGC +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQYWGFW*FLCMSG
Trigger: GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATA...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGCTTTATTGGGGCTTTTaGTGGTTTCTATGCATGAGC +
Preference number: 4 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMLYWGF*WFLCMS
Trigger: GCTCATGCATAGAAACCACCAAAAGCCCCAATAAAG...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACTCCTGGATGCTTTATTaGGGCTTTTGGTGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYSWMLY*GFWWFL
Trigger: TAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGA...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCTCCTGGATGCTTTATTaGGGCTTTTGGTGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSSWMLY*GFWWFL
Trigger: TAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGA...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGACATCTCTACCCTTCTaGCTCCAGCACTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQTSLPF*LQHLAM
Trigger: CATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGATGT...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCGTGTTCATGAGACAGTaGGTTACTGAGAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGVFMRQ*VTESSR
Trigger: CCGTGAGCTCTCAGTAACTCACTGTCTCATGAACAC...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCGTGTTCATGAGACAGTaGGTTACTGAGAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTVFMRQ*VTESSR
Trigger: CCGTGAGCTCTCAGTAACTCACTGTCTCATGAACAC...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCTGTCCAAGTGTTCATaGGACAGTGAGTTACTGAGA +
Preference number: 4 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLLSKCS*DSELLR
Trigger: TCTCAGTAACTCACTGTCTCATGAACACTTGGACAG...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGGGAATGTTTTCACACTaGCGGTATTATTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGGMFSH*RYYYSE
Trigger: TTCTGAGTAATAATACCGTCAGTGTGAAAACATTCC...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGTCTTGCTTGCTCTTGTaGAGAACTGAGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQSCLLL*RTETET
Trigger: GGTTTCAGTCTCAGTTCTTCACAAGAGCAAGCAAGA...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp AGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAAACCAGGGCTCCTTGTaGTCGCTCTGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RWETEFQRGENLTTFTKLNQGSL*SLCGRL
Trigger: GAGCCTGCCACAGAGCGAGCACAAGGAGCCCTGGTT...TAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR GCA 90 bp GAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGGAAGTATCAGGGCCACCACGTaGTCTCCTGTGAAGGTGCGC +
Preference number: 4 (lower is better)
Translates to: ETEFQRGENLTTFTKLGSIRATT*SPVKVR
Trigger: GCGCACCTTCACAGGAGAGCACGTGGTGGCCCTGAT...ACTTCCTAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR GCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGAAGAGGATGATGGCTaGTGCCTTCAGAGATTTCTA +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQEEDDG*CLQRFL
Trigger: TAGAAATCTCTGAAGGCAGCAGCCATCATCCTCTTC...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTGACCCTTTCCCAACATaGAAAAGGCACAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGDPFPT*KRHRKV
Trigger: CACTTTCCTGTGCCTTTTGCATGTTGGGAAAGGGTC...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGACTGTTCCTCCTGGATaGTTTATTGGGGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQTVPPG*FIGAFG
Trigger: ACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGT...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTCAGTCAACTCTTGCTTaGTCTTGTGAAGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRQSTLA*SCEELR
Trigger: TCTCAGTTCTTCACAAGAGCAAGCAAGAGTTGACTG...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGGAAGTTGCGGATCTCGGCCGTaGCGTACTTGGGGATCATGG +
Preference number: 4 (lower is better)
Translates to: ETEFQRGENLTTFTKLGSCGSRP*RTWGSW
Trigger: CCATGATCCCCAAGTACGCCACGGCCGAGATCCGCA...ACTTCCTAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR CCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCAAGGCAAAGCGTCTCTaGACCCTCTCAAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTKAKRL*TLSKKD
Trigger: GTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTT...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGGTCGGCTTTGTCCTGTaGAAGAGTTCCCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEVGFVL*KSSLGK
Trigger: CTTGCCCAGGGAACTCTTCCACAGGACAAAGCCGAC...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTGAGAGAGGGTCAACATaGCTTTTACTGAAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCERGST*LLLKVP
Trigger: TGGGACTTTCAGTAAAAGCCATGTTGACCCTCTCTC...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCATATTGGGGCTTTTGGTaGTTTCTATGCATGAGCGGC +
Preference number: 4 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPYWGFW*FLCMSG
Trigger: GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATA...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTAGCAACTGTTCCTCCTaGATGCTTTATTGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLSNCSS*MLYWGF
Trigger: AAAGCCCCAATAAAGCATCCAGGAGGAACAGTTGCT...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGAGCAACTGTTCCTCCTaGATGCTTTATTGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQSNCSS*MLYWGF
Trigger: AAAGCCCCAATAAAGCATCCAGGAGGAACAGTTGCT...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCACATCTCTACCCTTCTaGCTCCAGCACTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGTSLPF*LQHLAM
Trigger: CATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGATGT...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
3UTR CAA 72 bp TTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTaGAGTCTTGATGTCGGCTTTGTCCTGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LSSPIQRYRLEE*SLDVGFVLWKS
Trigger: ACTCTTCCACAGGACAAAGCCGACATCAAGACTCAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp AGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTACCACGTGCTCTCCTGTaGAGGTGCGCTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: RWETEFQRGENLTTFTKLPRALL*RCAPHS
Trigger: ACTATGTGGAGCGCACCTTCACAGGAGAGCACGTGG...TAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR TCA 90 bp TGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGGACATGGTCCAGTTTCATaGGGTCCGTGGTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: WETEFQRGENLTTFTKLGHGPVS*GPWWHW
Trigger: CCAATGCCACCACGGACCTCATGAAACTGGACCATG...TCCTAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR TCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGTCCACAGTTCCATCTTaGGACCTTGAATCGATAGAA +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQSTVPS*DLESIE
Trigger: TTCTATCGATTCAAGGTCTCAAGATGGAACTGTGGA...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTAAATCAGAAGGACAATaGGAGGGTGTGCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGKSEGQ*EGVLMV
Trigger: TACCATGAGCACACCCTCTCATTGTCCTTCTGATTT...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGAAGGTAGGAAGAGGATaGTGGCTGCTGCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEKVGRG*WLLPSE
Trigger: CTCTGAAGGCAGCAGCCATCATCCTCTTCCTACCTT...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGGAAGTGCTCGGGATGCAGGATaGAGCCATGCGTGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: ETEFQRGENLTTFTKLGSARDAG*SHACRH
Trigger: ATGCCTACACGCATGGCTGCATCCTGCATCCCGAGC...ACTTCCTAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR GCA 90 bp TATAGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGGTGGTGAGCTCGGGATaGAGGATGCAGCCATGCGTG +
Preference number: 4 (lower is better)
Translates to: YRWETEFQRGENLTTFTKVVSSG*RMQPCV
Trigger: CACGCATGGCTGCATCCTGCATCCCGAGCTCACCAC...CTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR GCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTGAGGATGATGGCTGCTaGCTTCAGAGATTTCTACTA +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGEDDGC*LQRFLL
Trigger: TAGTAGAAATCTCTGAAGGCAGCAGCCATCATCCTC...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCAGAAGAGGATGATGGCTaGTGCCTTCAGAGATTTCTA +
Preference number: 4 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPEEDDG*CLQRFL
Trigger: TAGAAATCTCTGAAGGCAGCAGCCATCATCCTCTTC...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCTTTTGGTGGTTTCTATaGATGAGCGGCAGTGACACC +
Preference number: 4 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGFWWFL*MSGSDT
Trigger: GGTGTCACTGCCGCTCATGCATAGAAACCACCAAAA...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTTTTGGTGGTTTCTATaGATGAGCGGCAGTGACACC +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTFWWFL*MSGSDT
Trigger: GGTGTCACTGCCGCTCATGCATAGAAACCACCAAAA...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTACTGTTCCTCCTGGATaGTTTATTGGGGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGTVPPG*FIGAFG
Trigger: ACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGT...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGGAAGTTCTGGTCCAGCACCATaGCCAGTTCCCCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: ETEFQRGENLTTFTKLGSSGPAP*PVPRGS
Trigger: AGATCCTCGGGGAACTGGCCATGGTGCTGGACCAGA...ACTTCCTAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR CCA 90 bp AGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAAGCTCCGCCTCAATCTaGTCCAGCACCATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: RWETEFQRGENLTTFTKLSSASI*SSTMAS
Trigger: ACTGGCCATGGTGCTGGACCAGATTGAGGCGGAGCT...TAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR CCA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCTTGAGTCACAGCATTaGCAACGTCTACTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLLESQH*QRLLLN
Trigger: GTTTAGAAGTAGACGTTGCCAATGCTGTGACTCAAG...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTGCCAAACCCAACACATaGACCAAATCAGAAGGACAA +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGAKPNT*TKSEGQ
Trigger: TTGTCCTTCTGATTTGGTCCATGTGTTGGGTTTGGC...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGCTTTATTGGGGCTTTTaGTGGTTTCTATGCATGAGC +
Preference number: 4 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQLYWGF*WFLCMS
Trigger: GCTCATGCATAGAAACCACCAAAAGCCCCAATAAAG...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGATCCTGGATGCTTTATTaGGGCTTTTGGTGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: ELLRAHGESHSTETPTVRSWMLY*GFWWFL
Trigger: TAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGA...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTTCCATCTTGAGACCTTaGATCGATAGAAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLSILRP*IDRKGI
Trigger: AATGCCTTTTCTATCGATTCAAGGTCTCAAGATGGA...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGTCCACAGTTCCATCTTaGGACCTTGAATCGATAGAA +
Preference number: 4 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQSTVPS*DLESIE
Trigger: TTCTATCGATTCAAGGTCTCAAGATGGAACTGTGGA...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGTCCAGCACTTGGCAATaGGAACTAGATGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: QLFLLDALLGLLVVSMHESSTWQ*ELDGQH
Trigger: GTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGA...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp CTGGCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCACTGTTCCTCCTGGATaGTTTATTGGGGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LALAQVNENKGLYTCPVTTVPPG*FIGAFG
Trigger: ACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGT...GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp AGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAATGATGTTGTCGCGGTaGATGATGACGGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: RWETEFQRGENLTTFTKLMMLSR*MMTGTS
Trigger: GGAGGTGCCCGTCATCATCCACCGCGACAACATCAT...TAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR TCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTCTGTCCAAGTGTTCATaGGACAGTGAGTTACTGAGA +
Preference number: 4 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCLSKCS*DSELLR
Trigger: TCTCAGTAACTCACTGTCTCATGAACACTTGGACAG...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGAGGAATGTTTTCACACTaGCGGTATTATTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: ELLRAHGESHSTETPTVRGMFSH*RYYYSE
Trigger: TTCTGAGTAATAATACCGTCAGTGTGAAAACATTCC...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTGGAATGTTTTCACACTaGCGGTATTATTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLGMFSH*RYYYSE
Trigger: TTCTGAGTAATAATACCGTCAGTGTGAAAACATTCC...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCATCCATCTTGAGACCTTaGATCGATAGAAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPSILRP*IDRKGI
Trigger: AATGCCTTTTCTATCGATTCAAGGTCTCAAGATGGA...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR GCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTGAGGATGATGGCTGCTaGCTTCAGAGATTTCTACTA +
Preference number: 4 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCEDDGC*LQRFLL
Trigger: TAGTAGAAATCTCTGAAGGCAGCAGCCATCATCCTC...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CCA 90 bp GAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGGAAGTGGTCCGTGGTGGCATTaGCTAAATGTCTGCGGATCT +
Preference number: 4 (lower is better)
Translates to: ETEFQRGENLTTFTKLGSGPWWH*LNVCGS
Trigger: AGATCCGCAGACATTTAGCCAATGCCACCACGGACC...ACTTCCTAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR TCA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTGGAATGTTTTCACACTaGCGGTATTATTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGGMFSH*RYYYSE
Trigger: TTCTGAGTAATAATACCGTCAGTGTGAAAACATTCC...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR TCA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTTCCACAGTTCCATCTTaGGACCTTGAATCGATAGAA +
Preference number: 4 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCSTVPS*DLESIE
Trigger: TTCTATCGATTCAAGGTCTCAAGATGGAACTGTGGA...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CCA 90 bp GGGCGGGGCTGGCCGCCTCGGGAGCGTCGGGGGCCTCCGCTGGCTTaGCCGCATCGCTCTCCAGCGCGGAGATGGGCCACCAGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: GRGWPPRERRGPPLA*PHRSPARRWATSCS
Trigger: ACTGCAGCTGGTGGCCCATCTCCGCGCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCCCCGACGCTCCCGAGGCGGCCAGCCCCGCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
CDS CCA 90 bp CCAATGGGCGGGGCTGGCCGCCTCGGGAGCGTCGGGGGCCTCCGCTaGCTTGGCCGCATCGCTCTCCAGCGCGGAGATGGGCCACCAGCT +
Preference number: 5 (lower is better)
Translates to: PMGGAGRLGSVGGLR*LGRIALQRGDGPPA
Trigger: AGCTGGTGGCCCATCTCCGCGCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCCCCGACGCTCCCGAGGCGGCCAGCCCCGCCCATTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
CDS CCA 90 bp TCCAGTGGTACAGAACCAGGCTCTCCCTGGGCCAATGGGCGGGGCTaGCCGCCTCGGGAGCGTCGGGGGCCTCCGCTGGCTTGGCCGCAT +
Preference number: 5 (lower is better)
Translates to: SSGTEPGSPWANGRG*PPRERRGPPLAWPH
Trigger: ATGCGGCCAAGCCAGCGGAGGCCCCCGACGCTCCCGAGGCGGCCAGCCCCGCCCATTGGCCCAGGGAGAGCCTGGTTCTGTACCACTGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp CCCATGCTCGGGCTTGGCTGCTGGCGGACAGGGGATTCTAGTGGTGGCCCGGCCGGGGCCTCCGCTGGCTaGGCCGCATCGCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PMLGLGCWRTGDSSGGPAGASAG*AASLSS
Trigger: GCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCCC...GGCCGGGCCACCACTAGAATCCCCTGTCCGCCAGCAGCCAAGCCCGAGCATGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CAA 90 bp CACCTCGGGCATCAGGGCCACCACGTGCTCTGTGGGCACCGCCAGGGGCTGGGCCTCTCAGCTCCAGACTaGCTGCCAGGCGGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: HLGHQGHHVLCGHRQGLGLSAPD*LPGGVL
Trigger: GAGGACCCCGCCTGGCAGCAAGTCTGGAGCTGAGAG...GCCCAGCCCCTGGCGGTGCCCACAGAGCACGTGGTGGCCCTGATGCCCGAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS GCA 90 bp GGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTaGAGGCTGCCCACCTCGGGCATCAGGGCCACCACGTGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: GSASSSSRYCSTRAC*RLPTSGIRATTCSP
Trigger: AGGAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000445952.2
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp ATCCATGGGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTGCCCCCATGCTCGGGCTaGGCTGCTGGCGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: IHGQCVQQLPVLQHPCVLPPCSG*AAGGQG
Trigger: CCCCTGTCCGCCAGCAGCCAAGCCCGAGCATGGGGG...CAGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCCCATGGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS GCA 90 bp GGCACCTCCTCGCCCAGGTTGAGCCGCATGAACCAGGGCTCCTTGTaGTCGCTCTGTGGCAGGCTCACGTCCCGCTCCTCGCACACCAGG +
Preference number: 5 (lower is better)
Translates to: GTSSPRLSRMNQGSL*SLCGRLTSRSSHTR
Trigger: CCTGGTGTGCGAGGAGCGGGACGTGAGCCTGCCACAGAGCGAGCACAAGGAGCCCTGGTTCATGCGGCTCAACCTGGGCGAGGAGGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000445952.2
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CCA 90 bp GCCCAGGTTGAGCCGCATGAACCAGGGCTCCTTGTGCTCGCTCTGTaGCAGGCTCACGTCCCGCTCCTCGCACACCAGGCCCTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: AQVEPHEPGLLVLAL*QAHVPLLAHQALLG
Trigger: GCCGAGAAGGGCCTGGTGTGCGAGGAGCGGGACGTGAGCCTGCCACAGAGCGAGCACAAGGAGCCCTGGTTCATGCGGCTCAACCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000445952.2
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CCCATGCTCGGGCTTGGCTGCTGGCGGACAGGGGATTCTAGTGGTGGCCCGGCCGGCCACCAGCTGCAGTaGGTGGGGGTCAGATTGTTG +
Preference number: 5 (lower is better)
Translates to: PMLGLGCWRTGDSSGGPAGHQLQ*VGVRLL
Trigger: CAACAATCTGACCCCCACCAACTGCAGCTGGTGGCC...GGCCGGGCCACCACTAGAATCCCCTGTCCGCCAGCAGCCAAGCCCGAGCATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CAA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGGGGGCCTCCGCTGGCTaGGCCGCATCGCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRGASAG*AASLSS
Trigger: GCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCCC...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp TCGGGCTTGGCTGCTGGCGGACAGGGGATTCTAGTGGTGGCCCGGCCATCTCTCACCTCCTCGCCCAGGTaGAGCCGCATGAACCAGGGC +
Preference number: 5 (lower is better)
Translates to: SGLAAGGQGILVVARPSLTSSPR*SRMNQG
Trigger: GCCCTGGTTCATGCGGCTCAACCTGGGCGAGGAGGT...GAGAGATGGCCGGGCCACCACTAGAATCCCCTGTCCGCCAGCAGCCAAGCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS TCA 90 bp GCCACCAGCTGCAGTTGGTGGGGGTCAGATTGTTGGGGGTCGCCATaGCAGCCCGGAATCAGAGGCAGGAAAGAAGGAGGCTCCGGCGCG +
Preference number: 5 (lower is better)
Translates to: ATSCSWWGSDCWGSP*QPGIRGRKEGGSGA
Trigger: CGCGCCGGAGCCTCCTTCTTTCCTGCCTCTGATTCCGGGCTGTCATGGCGACCCCCAACAATCTGACCCCCACCAACTGCAGCTGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp CATCCATGGGCAGTGCGTCCAGCAGCTCCCGGTACTGCAGCACCCGTGCGTGCTATGAACCAGGGCTCCTaGTGCTCGCTCTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: HPWAVRPAAPGTAAPVRAMNQGS*CSLCGR
Trigger: CCTGCCACAGAGCGAGCACAAGGAGCCCTGGTTCAT...AGCACGCACGGGTGCTGCAGTACCGGGAGCTGCTGGACGCACTGCCCATGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS-3UTR CAA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGAGGGGCCTCCGCTGGCTaGGCCGCATCGCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ELLRAHGESHSTETPTVRGASAG*AASLSS
Trigger: GCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCCC...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGAACCTCCTCGCCCAGGTaGAGCCGCATGAACCAGGGC +
Preference number: 5 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRTSSPR*SRMNQG
Trigger: GCCCTGGTTCATGCGGCTCAACCTGGGCGAGGAGGT...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS GCA 90 bp GCCAAGCTGTCCCCGAGGGTTAGCTCCTCTCAGCTCCAGACTTGCTaGCAGGCGGGGTCCTCCTGTGAAGGTGCGCTCCACATAGTCAAT +
Preference number: 5 (lower is better)
Translates to: AKLSPRVSSSQLQTC*QAGSSCEGALHIVN
Trigger: ATTGACTATGTGGAGCGCACCTTCACAGGAGGACCCCGCCTGGCAGCAAGTCTGGAGCTGAGAGGAGCTAACCCTCGGGGACAGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS CCA 90 bp ACCAGCCGGAAAGCATTGGGGATGACGGCCGACAGCAGGGTGGTGTaGATGTCACCCAGGACTTTCCGGAAGGCAAAGCGTCTCTGGACC +
Preference number: 5 (lower is better)
Translates to: TSRKALGMTADSRVV*MSPRTFRKAKRLWT
Trigger: GGTCCAGAGACGCTTTGCCTTCCGGAAAGTCCTGGGTGACATCCACACCACCCTGCTGTCGGCCGTCATCCCCAATGCTTTCCGGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGGGCCACCAGCTGCAGTaGGTGGGGGTCAGATTGTTG +
Preference number: 5 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRGHQLQ*VGVRLL
Trigger: CAACAATCTGACCCCCACCAACTGCAGCTGGTGGCC...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCAGGGGCCTCCGCTGGCTaGGCCGCATCGCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPGASAG*AASLSS
Trigger: GCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCCC...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTATGAACCAGGGCTCCTaGTGCTCGCTCTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGMNQGS*CSLCGR
Trigger: CCTGCCACAGAGCGAGCACAAGGAGCCCTGGTTCAT...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCACCTCCTCGCCCAGGTaGAGCCGCATGAACCAGGGC +
Preference number: 5 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPTSSPR*SRMNQG
Trigger: GCCCTGGTTCATGCGGCTCAACCTGGGCGAGGAGGT...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCGGCCGTGGCGTACTaGGGGATCATGGAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGSAVAY*GIMESV
Trigger: CACCGACTCCATGATCCCCAAGTACGCCACGGCCGA...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTAAGAAGGACTGCAGGTaGGGCCGGCTGCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGKKDCR*GRLPSS
Trigger: GGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTT...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CACCTCCCAGAATCTGGGCCCTGGTGGACGAAACATCCTGGGACTCACCTCAGAACCAGCCGGAAAGCATaGGGGATGACGGCCGACAGC +
Preference number: 5 (lower is better)
Translates to: HLPESGPWWTKHPGTHLRTSRKA*GMTADS
Trigger: GCTGTCGGCCGTCATCCCCAATGCTTTCCGGCTGGT...TCTGAGGTGAGTCCCAGGATGTTTCGTCCACCAGGGCCCAGATTCTGGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS TCA 90 bp GGTAGGGCTCGGAGAGCTGGGGCTCCTCTTCATGGTCCAGTTTCATaGGGTCCGTGGTGGCATTGGCTAAATGTCTGCGGATCTCGGCCG +
Preference number: 5 (lower is better)
Translates to: GRARRAGAPLHGPVS*GPWWHWLNVCGSRP
Trigger: CGGCCGAGATCCGCAGACATTTAGCCAATGCCACCACGGACCTCATGAAACTGGACCATGAAGAGGAGCCCCAGCTCTCCGAGCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000445952.2
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CAA 90 bp GATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTAGTGGGGGTCAGATTGTaGGGGGTCGCCATGACAGCC +
Preference number: 5 (lower is better)
Translates to: DLQGPPMGSPVIQPHSEVVGVRL*GVAMTA
Trigger: GGCTGTCATGGCGACCCCCAACAATCTGACCCCCAC...TACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp CCCCTGCACTTGGGCTGGACTGACCTTCTGAGAGAGGGTCAACATGGCTTTTACACCTCCTCGCCCAGGTaGAGCCGCATGAACCAGGGC +
Preference number: 5 (lower is better)
Translates to: PLHLGWTDLLREGQHGFYTSSPR*SRMNQG
Trigger: GCCCTGGTTCATGCGGCTCAACCTGGGCGAGGAGGT...GTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTAGACAGTCCCAGGAACTaGAGGCGGTGCAGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: DLQGPPMGSPVIQPHSEVDSPRN*RRCRVA
Trigger: AGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTC...TACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGACAGTCCCAGGAACTaGAGGCGGTGCAGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PLPWLKLVHVQEKREAPSDSPRN*RRCRVA
Trigger: AGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTC...AGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCACCAGCCGGAAAGCATaGGGGATGACGGCCGACAGC +
Preference number: 5 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPTSRKA*GMTADS
Trigger: GCTGTCGGCCGTCATCCCCAATGCTTTCCGGCTGGT...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCAGTAGAGCCGTGGCCTaGAGTCACAGCATTGGCAAC +
Preference number: 5 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTSRAVA*SHSIGN
Trigger: GTTGCCAATGCTGTGACTCAAGGCCACGGCTCTACT...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGAGGGGGACCTAGGTTaGTCCACCTCCAGATCCGCC +
Preference number: 5 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMEGDLG*STSRSA
Trigger: GGCGGATCTGGAGGTGGACAAACCTAGGTCCCCCTC...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGGAGGGGGACCTAGGTTaGTCCACCTCCAGATCCGCC +
Preference number: 5 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELEGDLG*STSRSA
Trigger: GGCGGATCTGGAGGTGGACAAACCTAGGTCCCCCTC...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS GCA 90 bp CCATCTTCCCAGTATTTCTTGGACAGTCCCAGGAACTTGAGGCGGTaGAGGGTGGCTCCCAGGAGGACATCAGCGAGGGTGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: PSSQYFLDSPRNLRR*RVAPRRTSARVKAQ
Trigger: CTGTGCCTTCACCCTCGCTGATGTCCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CCA 90 bp GTGGTGTGGATGTCACCCAGGACTTTCCGGAAGGCAAAGCGTCTCTaGACCCTCTCAAAGAAGGACTGCAGGTTGGGCCGGCTGCCATCT +
Preference number: 5 (lower is better)
Translates to: VVWMSPRTFRKAKRL*TLSKKDCRLGRLPS
Trigger: AGATGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTTCCGGAAAGTCCTGGGTGACATCCACACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGTGGGGGTCAGATTGTaGGGGGTCGCCATGACAGCC +
Preference number: 5 (lower is better)
Translates to: AWFLGATALAQASPCPGEVGVRL*GVAMTA
Trigger: GGCTGTCATGGCGACCCCCAACAATCTGACCCCCAC...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGTGGGGGTCAGATTGTaGGGGGTCGCCATGACAGCC +
Preference number: 5 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRVGVRL*GVAMTA
Trigger: GGCTGTCATGGCGACCCCCAACAATCTGACCCCCAC...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTTGGTGGGGGTCAGATaGTTGGGGGTCGCCATGACA +
Preference number: 5 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGLVGVR*LGVAMT
Trigger: TGTCATGGCGACCCCCAACAATCTGACCCCCACCAA...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTACCTCCTCGCCCAGGTaGAGCCGCATGAACCAGGGC +
Preference number: 5 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPTSSPR*SRMNQG
Trigger: GCCCTGGTTCATGCGGCTCAACCTGGGCGAGGAGGT...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CCCCTGCACTTGGGCTGGACTGACCTTCTGAGAGAGGGTCAACATGGCTTTTACTCGGCCGTGGCGTACTaGGGGATCATGGAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: PLHLGWTDLLREGQHGFYSAVAY*GIMESV
Trigger: CACCGACTCCATGATCCCCAAGTACGCCACGGCCGA...GTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTAAAGAAGGACTGCAGGTaGGGCCGGCTGCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: DLQGPPMGSPVIQPHSEVKKDCR*GRLPSS
Trigger: GGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTT...TACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGAAGAAGGACTGCAGGTaGGGCCGGCTGCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: SDLQGPPMGSPVIQPHSEKKDCR*GRLPSS
Trigger: GGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTT...CTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CCCCTGCACTTGGGCTGGACTGACCTTCTGAGAGAGGGTCAACATGGCTTTTACACCAGCCGGAAAGCATaGGGGATGACGGCCGACAGC +
Preference number: 5 (lower is better)
Translates to: PLHLGWTDLLREGQHGFYTSRKA*GMTADS
Trigger: GCTGTCGGCCGTCATCCCCAATGCTTTCCGGCTGGT...GTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCGTCTTGATGTCGGCTTaGTCCTGTGGAAGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTVLMSA*SCGRVP
Trigger: GGGAACTCTTCCACAGGACAAAGCCGACATCAAGAC...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGATCCGCCCCTGCACTaGGGCTGGACTGACCTTCTG +
Preference number: 5 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRDPPLH*GWTDLL
Trigger: CAGAAGGTCAGTCCAGCCCAAGTGCAGGGGCGGATC...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAGGGGGACCTAGGTTaGTCCACCTCCAGATCCGCC +
Preference number: 5 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKREGDLG*STSRSA
Trigger: GGCGGATCTGGAGGTGGACAAACCTAGGTCCCCCTC...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGGCCACCAGCTGCAGTaGGTGGGGGTCAGATTGTTG +
Preference number: 5 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRGHQLQ*VGVRLL
Trigger: CAACAATCTGACCCCCACCAACTGCAGCTGGTGGCC...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTATGAACCAGGGCTCCTaGTGCTCGCTCTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRMNQGS*CSLCGR
Trigger: CCTGCCACAGAGCGAGCACAAGGAGCCCTGGTTCAT...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGTCGGCCGTGGCGTACTaGGGGATCATGGAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQSAVAY*GIMESV
Trigger: CACCGACTCCATGATCCCCAAGTACGCCACGGCCGA...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGGTCTTGATGTCGGCTTaGTCCTGTGGAAGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRVLMSA*SCGRVP
Trigger: GGGAACTCTTCCACAGGACAAAGCCGACATCAAGAC...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTTGGGTGCCACTGCCTaGGCTCAAGCTAGTCCATGT +
Preference number: 5 (lower is better)
Translates to: HVQEKREAPSDLQGPPMGLGATA*AQASPC
Trigger: ACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAA...CCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCACTGCAGCCTGGTTTTaGGGTGCCACTGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPTAAWF*GATALA
Trigger: AGCCAAGGCAGTGGCACCCAAAAACCAGGCTGCAGT...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCACTGCAGCCTGGTTTTaGGGTGCCACTGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCTAAWF*GATALA
Trigger: AGCCAAGGCAGTGGCACCCAAAAACCAGGCTGCAGT...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTGATCCGCCCCTGCACTaGGGCTGGACTGACCTTCTG +
Preference number: 5 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLDPPLH*GWTDLL
Trigger: CAGAAGGTCAGTCCAGCCCAAGTGCAGGGGCGGATC...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CCA 90 bp GGAAGGCAAAGCGTCTCTGGACCCTCTCAAAGAAGGACTGCAGGTTaGGCCGGCTGCCATCTTCCCAGTATTTCTTGGACAGTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GRQSVSGPSQRRTAG*AGCHLPSISWTVPG
Trigger: TCCTGGGACTGTCCAAGAAATACTGGGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTTGGTGGGGGTCAGATaGTTGGGGGTCGCCATGACA +
Preference number: 5 (lower is better)
Translates to: WFLGATALAQASPCPGEALVGVR*LGVAMT
Trigger: TGTCATGGCGACCCCCAACAATCTGACCCCCACCAA...CGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTGGCCACCAGCTGCAGTaGGTGGGGGTCAGATTGTTG +
Preference number: 5 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLGHQLQ*VGVRLL
Trigger: CAACAATCTGACCCCCACCAACTGCAGCTGGTGGCC...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS-3UTR CAA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTATGAACCAGGGCTCCTaGTGCTCGCTCTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLMNQGS*CSLCGR
Trigger: CCTGCCACAGAGCGAGCACAAGGAGCCCTGGTTCAT...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGATGAACCAGGGCTCCTaGTGCTCGCTCTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQMNQGS*CSLCGR
Trigger: CCTGCCACAGAGCGAGCACAAGGAGCCCTGGTTCAT...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGAGGTCCGTGGTGGCATaGGCTAAATGTCTGCGGATC +
Preference number: 5 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMRSVVA*AKCLRI
Trigger: GATCCGCAGACATTTAGCCAATGCCACCACGGACCT...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CAA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGGACAGTCCCAGGAACTaGAGGCGGTGCAGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQDSPRN*RRCRVA
Trigger: AGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTC...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTAAGAAGGACTGCAGGTaGGGCCGGCTGCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCKKDCR*GRLPSS
Trigger: GGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTT...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGAAGAAGGACTGCAGGTaGGGCCGGCTGCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQKKDCR*GRLPSS
Trigger: GGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTT...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCAACCAGCCGGAAAGCATaGGGGATGACGGCCGACAGC +
Preference number: 5 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPTSRKA*GMTADS
Trigger: GCTGTCGGCCGTCATCCCCAATGCTTTCCGGCTGGT...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp ATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACAGTAGAGCCGTGGCCTaGAGTCACAGCATTGGCAAC +
Preference number: 5 (lower is better)
Translates to: IFRDLPWGLRLSSPIQRYSRAVA*SHSIGN
Trigger: GTTGCCAATGCTGTGACTCAAGGCCACGGCTCTACT...GTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTAAGTAGAGCCGTGGCCTaGAGTCACAGCATTGGCAAC +
Preference number: 5 (lower is better)
Translates to: DLQGPPMGSPVIQPHSEVSRAVA*SHSIGN
Trigger: GTTGCCAATGCTGTGACTCAAGGCCACGGCTCTACT...TACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCTTGGGTGCCACTGCCTaGGCTCAAGCTAGTCCATGT +
Preference number: 5 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPLGATA*AQASPC
Trigger: ACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAA...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTACTGCAGCCTGGTTTTaGGGTGCCACTGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRTAAWF*GATALA
Trigger: AGCCAAGGCAGTGGCACCCAAAAACCAGGCTGCAGT...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GGACCTAGGTTTGTCCACCTCCAGATCCGCCCCTGCACTTGGGCTGGACTGACCCTCCTGGATGCTTTATaGGGGCTTTTGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: GPRFVHLQIRPCTWAGLTLLDAL*GLLVVS
Trigger: AGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAG...GGTCAGTCCAGCCCAAGTGCAGGGGCGGATCTGGAGGTGGACAAACCTAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGTTCTGGCTCCAGCACTaGGCAATGAGAACTAGATGG +
Preference number: 5 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPFWLQH*AMRTRW
Trigger: CCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAA...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCCAGACCCAGCAACTaGAGACAGGCAGTCAACTCT +
Preference number: 5 (lower is better)
Translates to: DLQGPPMGSPVIQPHSEVPRPSN*RQAVNS
Trigger: AGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGG...TACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGCCCAGACCCAGCAACTaGAGACAGGCAGTCAACTCT +
Preference number: 5 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELPRPSN*RQAVNS
Trigger: AGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGG...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp AGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCTGGGGTCTCGCTATATaGCCCAGGCTTGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SVKPLLIFRDLPWGLRLSWGLAI*PRLVLN
Trigger: GTTCAAGACAAGCCTGGGCAATATAGCGAGACCCCA...GGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTGGCCATGAGCTTCTTTaGTTTAGAAAGGTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGGHELL*FRKVGL
Trigger: GAGCCCTACCTTTCTAAACAAAAGAAGCTCATGGCC...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CAA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCGACAGTCCCAGGAACTaGAGGCGGTGCAGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGDSPRN*RRCRVA
Trigger: AGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTC...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGTCTTCCCAGTATTTCTaGGACAGTCCCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPSSQYF*DSPRNL
Trigger: CAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGA...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTCTTCCCAGTATTTCTaGGACAGTCCCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: SGTSHGVSGYPAPFRGTGSSQYF*DSPRNL
Trigger: CAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGA...ACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGGATGGGGGTTTCCTCTaGACCAGCCGGAAAGCATTG +
Preference number: 5 (lower is better)
Translates to: WFLGATALAQASPCPGEADGGFL*TSRKAL
Trigger: CAATGCTTTCCGGCTGGTCAAGAGGAAACCCCCATC...CGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp AGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTACCGGTTAGAGGAGTaGAGTCTTGATGTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: RRSVKPLLIFRDLPWGLRYRLEE*SLDVGF
Trigger: AAAGCCGACATCAAGACTCAACTCCTCTAACCGGTA...CCGGAGACCCCATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTTGGGTGCCACTGCCTaGGCTCAAGCTAGTCCATGT +
Preference number: 5 (lower is better)
Translates to: WFLGATALAQASPCPGEALGATA*AQASPC
Trigger: ACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAA...CGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGACTGCAGCCTGGTTTTaGGGTGCCACTGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQTAAWF*GATALA
Trigger: AGCCAAGGCAGTGGCACCCAAAAACCAGGCTGCAGT...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTACTGCAGCCTGGTTTTaGGGTGCCACTGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLTAAWF*GATALA
Trigger: AGCCAAGGCAGTGGCACCCAAAAACCAGGCTGCAGT...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGATTCTGGCTCCAGCACTaGGCAATGAGAACTAGATGG +
Preference number: 5 (lower is better)
Translates to: PPMGSPVIQPHSEVPVRGFWLQH*AMRTRW
Trigger: CCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAA...TCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCACTACACCTGGCCCTaGCACAGGTTAATGAGAACA +
Preference number: 5 (lower is better)
Translates to: WVPLPWLKLVHVQEKREAHYTWP*HRLMRT
Trigger: TGTTCTCATTAACCTGTGCAAGGGCCAGGTGTAGTG...GGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTATGGGGTCTCGCTATATaGCCCAGGCTTGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: DLQGPPMGSPVIQPHSEVWGLAI*PRLVLN
Trigger: GTTCAAGACAAGCCTGGGCAATATAGCGAGACCCCA...TACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS GCA 90 bp ACTTTCCGGAAGGCAAAGCGTCTCTGGACCCTCTCAAAGAAGGACTaGAGGTTGGGCCGGCTGCCATCTTCCCAGTATTTCTTGGACAGT +
Preference number: 5 (lower is better)
Translates to: TFRKAKRLWTLSKKD*RLGRLPSSQYFLDS
Trigger: ACTGTCCAAGAAATACTGGGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTTCCGGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTGATGGGGGTTTCCTCTaGACCAGCCGGAAAGCATTG +
Preference number: 5 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCDGGFL*TSRKAL
Trigger: CAATGCTTTCCGGCTGGTCAAGAGGAAACCCCCATC...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGCTTTATTGGGGCTTTaGGTGGTTTCTATGCATGAG +
Preference number: 5 (lower is better)
Translates to: LQGPPMGSPVIQPHSEVPALLGL*VVSMHE
Trigger: CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGC...CGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGTTCTGGCTCCAGCACTaGGCAATGAGAACTAGATGG +
Preference number: 5 (lower is better)
Translates to: PWGLRLSSPIQRYRLEELFWLQH*AMRTRW
Trigger: CCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAA...CAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGGAACCTCCTCGCCCAGGTaGAGCCGCATGAACCAGGGC +
Preference number: 5 (lower is better)
Translates to: WETEFQRGENLTTFTKLGTSSPR*SRMNQG
Trigger: GCCCTGGTTCATGCGGCTCAACCTGGGCGAGGAGGT...TCCTAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR CAA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGTCGGCCGTGGCGTACTaGGGGATCATGGAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: QLFLLDALLGLLVVSMHESAVAY*GIMESV
Trigger: CACCGACTCCATGATCCCCAAGTACGCCACGGCCGA...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TCTCTACCCTTCTGGCTCCAGCACTTGGCAATGAGAACTAGATGGACAGCACAGAGGTCCGTGGTGGCATaGGCTAAATGTCTGCGGATC +
Preference number: 5 (lower is better)
Translates to: SLPFWLQHLAMRTRWTAQRSVVA*AKCLRI
Trigger: GATCCGCAGACATTTAGCCAATGCCACCACGGACCT...CTGTGCTGTCCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAAGGGTAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CAA 90 bp CTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCGGCCATGAGCTTCTTTaGTTTAGAAAGGTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: LVHVQEKREAPSDLQGPPGHELL*FRKVGL
Trigger: GAGCCCTACCTTTCTAAACAAAAGAAGCTCATGGCC...GGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CAA 90 bp CCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTTCTTCCCAGTATTTCTaGGACAGTCCCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: PLPWLKLVHVQEKREAPSSSQYF*DSPRNL
Trigger: CAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGA...AGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGTCTTCCCAGTATTTCTaGGACAGTCCCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMSSQYF*DSPRNL
Trigger: CAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGA...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTGTCTTGATGTCGGCTTaGTCCTGTGGAAGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: PWLKLVHVQEKREAPSDLVLMSA*SCGRVP
Trigger: GGGAACTCTTCCACAGGACAAAGCCGACATCAAGAC...AAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTGTCTTGATGTCGGCTTaGTCCTGTGGAAGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCVLMSA*SCGRVP
Trigger: GGGAACTCTTCCACAGGACAAAGCCGACATCAAGAC...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGGTATACCGGTTAGAGGAGTaGAGTCTTGATGTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: DLQGPPMGSPVIQPHSEVYRLEE*SLDVGF
Trigger: AAAGCCGACATCAAGACTCAACTCCTCTAACCGGTA...TACCTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGGAGGGGGACCTAGGTTaGTCCACCTCCAGATCCGCC +
Preference number: 5 (lower is better)
Translates to: QLFLLDALLGLLVVSMHEEGDLG*STSRSA
Trigger: GGCGGATCTGGAGGTGGACAAACCTAGGTCCCCCTC...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCCTCCTGGATGCTTTATaGGGGCTTTTGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCLLDAL*GLLVVS
Trigger: AGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAG...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCACAGGCAGTCAACTCTaGCTTGCTCTTGTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCTGSQL*LALVKN
Trigger: GTTCTTCACAAGAGCAAGCAAGAGTTGACTGCCTGT...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TCTGATCTTCAGGGACCTCCCATGGGGTCTCCGGTTATCCAGCCCCATTCAGAGACAGGCAGTCAACTCTaGCTTGCTCTTGTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: SDLQGPPMGSPVIQPHSETGSQL*LALVKN
Trigger: GTTCTTCACAAGAGCAAGCAAGAGTTGACTGCCTGT...CTCTGAATGGGGCTGGATAACCGGAGACCCCATGGGAGGTCCCTGAAGATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCACAGGCAGTCAACTCTaGCTTGCTCTTGTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSTGSQL*LALVKN
Trigger: GTTCTTCACAAGAGCAAGCAAGAGTTGACTGCCTGT...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTCCCAGACCCAGCAACTaGAGACAGGCAGTCAACTCT +
Preference number: 5 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGPRPSN*RQAVNS
Trigger: AGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGG...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTCACTACACCTGGCCCTaGCACAGGTTAATGAGAACA +
Preference number: 5 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRHYTWP*HRLMRT
Trigger: TGTTCTCATTAACCTGTGCAAGGGCCAGGTGTAGTG...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGTGGGGTCTCGCTATATaGCCCAGGCTTGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQWGLAI*PRLVLN
Trigger: GTTCAAGACAAGCCTGGGCAATATAGCGAGACCCCA...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GAGTTACTGAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGATGGGGTCTCGCTATATaGCCCAGGCTTGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: ELLRAHGESHSTETPTVRWGLAI*PRLVLN
Trigger: GTTCAAGACAAGCCTGGGCAATATAGCGAGACCCCA...TCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTCAGTAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAACTCCACAGTTCCATCTaGAGACTTTCCGGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: AWFLGATALAQASPCPGELHSSI*RLSGRQ
Trigger: TTGCCTTCCGGAAAGTCTCAAGATGGAACTGTGGAG...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447658.1
CDS-3UTR CAA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCGATGGGGGTTTCCTCTaGACCAGCCGGAAAGCATTG +
Preference number: 5 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGDGGFL*TSRKAL
Trigger: CAATGCTTTCCGGCTGGTCAAGAGGAAACCCCCATC...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CATGGACCAAATCAGAAGGACAATGAGAGGGTGTGCTCATGGTATCCGTCCCCAGTCTTGATGTCGGCTTaGTCCTGTGGAAGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: HGPNQKDNERVCSWYPSPVLMSA*SCGRVP
Trigger: GGGAACTCTTCCACAGGACAAAGCCGACATCAAGAC...TGGGGACGGATACCATGAGCACACCCTCTCATTGTCCTTCTGATTTGGTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTTACCGGTTAGAGGAGTaGAGTCTTGATGTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRYRLEE*SLDVGF
Trigger: AAAGCCGACATCAAGACTCAACTCCTCTAACCGGTA...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCTTGGGTGCCACTGCCTaGGCTCAAGCTAGTCCATGT +
Preference number: 5 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGLGATA*AQASPC
Trigger: ACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAA...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp AGTCTGGAAGCCAGCCCCAGACCCAGCAACTTGAGACAGGCAGTCAACTCTTGCAATGAGAACAAAGGGTaGTACACATGCCCTGTAACC +
Preference number: 5 (lower is better)
Translates to: SLEASPRPSNLRQAVNSCNENKG*YTCPVT
Trigger: GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATT...GCAAGAGTTGACTGCCTGTCTCAAGTTGCTGGGTCTGGGGCTGGCTTCCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GAGAGCTCACGGGGAATCACACAGCACAGAGACACCGACAGTCAGACACCAAGCAATGAGAACAAAGGGTaGTACACATGCCCTGTAACC +
Preference number: 5 (lower is better)
Translates to: ESSRGITQHRDTDSQTPSNENKG*YTCPVT
Trigger: GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATT...GCTTGGTGTCTGACTGTCGGTGTCTCTGTGCTGTGTGATTCCCCGTGAGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCCCATGAATGAGAACAAAGGGTaGTACACATGCCCTGTAACC +
Preference number: 5 (lower is better)
Translates to: VHVQEKREAPSDLQGPPMNENKG*YTCPVT
Trigger: GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATT...CATGGGAGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTCACTACACCTGGCCCTaGCACAGGTTAATGAGAACA +
Preference number: 5 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCHYTWP*HRLMRT
Trigger: TGTTCTCATTAACCTGTGCAAGGGCCAGGTGTAGTG...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS TCA 90 bp GTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTTGAGTCTTaGTGTCGGCTTTGTCCTGTGGAAGAGTTCCCTCAGATCCTAACC +
Preference number: 5 (lower is better)
Translates to: VIQPHSEVPVRGVES*CRLCPVEEFPQILT
Trigger: GGTTAGGATCTGAGGGAACTCTTCCACAGGACAAAGCCGACATCAAGACTCAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447658.1
CDS-3UTR CAA 90 bp AGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTATCGGCCGTGGCGTACTaGGGGATCATGGAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: RWETEFQRGENLTTFTKLSAVAY*GIMESV
Trigger: CACCGACTCCATGATCCCCAAGTACGCCACGGCCGA...TAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR CAA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGTCTTCCCAGTATTTCTaGGACAGTCCCAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQSSQYF*DSPRNL
Trigger: CAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGA...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTAGTAGAGCCGTGGCCTaGAGTCACAGCATTGGCAAC +
Preference number: 5 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCSRAVA*SHSIGN
Trigger: GTTGCCAATGCTGTGACTCAAGGCCACGGCTCTACT...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CACACTGACGGTATTATTACTCAGAACGAAGGGCGGGGAGGGCTGTCCAAGTGTTACCGGTTAGAGGAGTaGAGTCTTGATGTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: HTDGIITQNEGRGGLSKCYRLEE*SLDVGF
Trigger: AAAGCCGACATCAAGACTCAACTCCTCTAACCGGTA...ACACTTGGACAGCCCTCCCCGCCCTTCGTTCTGAGTAATAATACCGTCAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTTACCGGTTAGAGGAGTaGAGTCTTGATGTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPYRLEE*SLDVGF
Trigger: AAAGCCGACATCAAGACTCAACTCCTCTAACCGGTA...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GCCTGGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCTTTATTGGGGCTTTaGGTGGTTTCTATGCATGAG +
Preference number: 5 (lower is better)
Translates to: AWFLGATALAQASPCPGEALLGL*VVSMHE
Trigger: CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGC...TTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp CCCCTGCACTTGGGCTGGACTGACCTTCTGAGAGAGGGTCAACATGGCTTTTACGCTTTATTGGGGCTTTaGGTGGTTTCTATGCATGAG +
Preference number: 5 (lower is better)
Translates to: PLHLGWTDLLREGQHGFYALLGL*VVSMHE
Trigger: CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGC...GTAAAAGCCATGTTGACCCTCTCTCAGAAGGTCAGTCCAGCCCAAGTGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTCTCCTGGATGCTTTATaGGGGCTTTTGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPLLDAL*GLLVVS
Trigger: AGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAG...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp AAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGGACCTACAGGCAGTCAACTCTaGCTTGCTCTTGTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: KLVHVQEKREAPSDLQGPTGSQL*LALVKN
Trigger: GTTCTTCACAAGAGCAAGCAAGAGTTGACTGCCTGT...AGGTCCCTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GGTTTTTGGGTGCCACTGCCTTGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTAATGAGAACAAAGGGTaGTACACATGCCCTGTAACC +
Preference number: 5 (lower is better)
Translates to: GFWVPLPWLKLVHVQEKRNENKG*YTCPVT
Trigger: GGTTACAGGGCATGTGTACAACCCTTTGTTCTCATT...ACGCTTCTCCTGGACATGGACTAGCTTGAGCCAAGGCAGTGGCACCCAAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp AGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAATGAACCAGGGCTCCTaGTGCTCGCTCTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: RWETEFQRGENLTTFTKLMNQGS*CSLCGR
Trigger: CCTGCCACAGAGCGAGCACAAGGAGCCCTGGTTCAT...TAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR CAA 90 bp CAACTGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGAGGTCCGTGGTGGCATaGGCTAAATGTCTGCGGATC +
Preference number: 5 (lower is better)
Translates to: QLFLLDALLGLLVVSMHERSVVA*AKCLRI
Trigger: GATCCGCAGACATTTAGCCAATGCCACCACGGACCT...CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000617075.4
CDS-3UTR CAA 90 bp TGGCTCAAGCTAGTCCATGTCCAGGAGAAGCGTGAAGCCCCTTCTGATCTTCAGGCTTTATTGGGGCTTTaGGTGGTTTCTATGCATGAG +
Preference number: 5 (lower is better)
Translates to: WLKLVHVQEKREAPSDLQALLGL*VVSMHE
Trigger: CTCATGCATAGAAACCACCAAAAGCCCCAATAAAGC...CTGAAGATCAGAAGGGGCTTCACGCTTCTCCTGGACATGGACTAGCTTGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp GGGTTGTACACATGCCCTGTAACCTGTAAAGGGCTGAGCCTAAATGAGCTGGGTCTCCTGGATGCTTTATaGGGGCTTTTGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: GLYTCPVTCKGLSLNELGLLDAL*GLLVVS
Trigger: AGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAG...ACCCAGCTCATTTAGGCTCAGCCCTTTACAGGTTACAGGGCATGTGTACAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGTTCCTCCTGGATGCTTTATTGGGGCTTTTGGTGGTTTCTATGCATGAGCGGCCACTACACCTGGCCCTaGCACAGGTTAATGAGAACA +
Preference number: 5 (lower is better)
Translates to: CSSWMLYWGFWWFLCMSGHYTWP*HRLMRT
Trigger: TGTTCTCATTAACCTGTGCAAGGGCCAGGTGTAGTG...GCCGCTCATGCATAGAAACCACCAAAAGCCCCAATAAAGCATCCAGGAGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGCTAGGAAGGTCCGTGGTGGCATaGGCTAAATGTCTGCGGATC +
Preference number: 5 (lower is better)
Translates to: WETEFQRGENLTTFTKLGRSVVA*AKCLRI
Trigger: GATCCGCAGACATTTAGCCAATGCCACCACGGACCT...TCCTAGCTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS-3UTR CAA 90 bp GCCCTTGCACAGGTTAATGAGAACAAAGGGTTGTACACATGCCCTGTAACCTGTTTCTGGCTCCAGCACTaGGCAATGAGAACTAGATGG +
Preference number: 5 (lower is better)
Translates to: ALAQVNENKGLYTCPVTCFWLQH*AMRTRW
Trigger: CCATCTAGTTCTCATTGCCAAGTGCTGGAGCCAGAA...ACAGGTTACAGGGCATGTGTACAACCCTTTGTTCTCATTAACCTGTGCAAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS-3UTR CAA 90 bp TATAGATGGGAAACTGAATTTCAGAGAGGGGAGAACCTGACCACATTTACTAAGGGCCATGAGCTTCTTTaGTTTAGAAAGGTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: YRWETEFQRGENLTTFTKGHELL*FRKVGL
Trigger: GAGCCCTACCTTTCTAAACAAAAGAAGCTCATGGCC...CTTAGTAAATGTGGTCAGGTTCTCCCCTCTCTGAAATTCAGTTTCCCATCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445952.2
CDS CCA 72 bp GGGGCTGGCCGCCTCGGGAGCGTCGGGGGCCTCCGCTaGCTTGGCCGCATCGCTCTCCAGCGCGGAGATGGG +
Preference number: 6 (lower is better)
Translates to: GAGRLGSVGGLR*LGRIALQRGDG
Trigger: CCCATCTCCGCGCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCCCCGACGCTCCCGAGGCGGCCAGCCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
CDS CAA 90 bp TGGGCGGGGCTGGCCGCCTCGGGAGCGTCGGGGGCCTCCGCTGGCTaGGCCGCATCGCTCTCCAGCGCGGAGATGGGCCACCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: WAGLAASGASGASAG*AASLSSAEMGHQLQ
Trigger: CTGCAGCTGGTGGCCCATCTCCGCGCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCCCCGACGCTCCCGAGGCGGCCAGCCCCGCCCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
CDS CCA 72 bp TGGCCGCCTCGGGAGCGTCGGGGGCCTCCGCTGGCTTaGCCGCATCGCTCTCCAGCGCGGAGATGGGCCACC +
Preference number: 6 (lower is better)
Translates to: WPPRERRGPPLA*PHRSPARRWAT
Trigger: GGTGGCCCATCTCCGCGCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCCCCGACGCTCCCGAGGCGGCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
CDS CAA 72 bp CTGGCCGCCTCGGGAGCGTCGGGGGCCTCCGCTGGCTaGGCCGCATCGCTCTCCAGCGCGGAGATGGGCCAC +
Preference number: 6 (lower is better)
Translates to: LAASGASGASAG*AASLSSAEMGH
Trigger: GTGGCCCATCTCCGCGCTGGAGAGCGATGCGGCCAAGCCAGCGGAGGCCCCCGACGCTCCCGAGGCGGCCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
CDS CCA 72 bp ACAGAACCAGGCTCTCCCTGGGCCAATGGGCGGGGCTaGCCGCCTCGGGAGCGTCGGGGGCCTCCGCTGGCT +
Preference number: 6 (lower is better)
Translates to: TEPGSPWANGRG*PPRERRGPPLA
Trigger: AGCCAGCGGAGGCCCCCGACGCTCCCGAGGCGGCCAGCCCCGCCCATTGGCCCAGGGAGAGCCTGGTTCTGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
CDS GCA 72 bp GCTCCCGGTACTGCAGCACCCGTGCGTGCTGCAGGCTaGCCACCTCGGGCATCAGGGCCACCACGTGCTCTC +
Preference number: 6 (lower is better)
Translates to: APGTAAPVRAAG*PPRASGPPRAL
Trigger: GAGAGCACGTGGTGGCCCTGATGCCCGAGGTGGGCAGCCTGCAGCACGCACGGGTGCTGCAGTACCGGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000445952.2
ENST00000612599.4
ENST00000617075.4
CDS CAA 90 bp ACGGGCACCTCCTCGCCCAGGTTGAGCCGCATGAACCAGGGCTCCTaGTGCTCGCTCTGTGGCAGGCTCACGTCCCGCTCCTCGCACACC +
Preference number: 6 (lower is better)
Translates to: TGTSSPRLSRMNQGS*CSLCGRLTSRSSHT
Trigger: GGTGTGCGAGGAGCGGGACGTGAGCCTGCCACAGAGCGAGCACAAGGAGCCCTGGTTCATGCGGCTCAACCTGGGCGAGGAGGTGCCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000445952.2
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS GCA 72 bp CCGCATCGCTCTCCAGCGCGGAGATGGGCCACCAGCTaGAGTTGGTGGGGGTCAGATTGTTGGGGGTCGCCA +
Preference number: 6 (lower is better)
Translates to: PHRSPARRWATS*SWWGSDCWGSP
Trigger: TGGCGACCCCCAACAATCTGACCCCCACCAACTGCAGCTGGTGGCCCATCTCCGCGCTGGAGAGCGATGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
CDS GCA 72 bp TCGCCCAGGTTGAGCCGCATGAACCAGGGCTCCTTGTaGTCGCTCTGTGGCAGGCTCACGTCCCGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: SPRLSRMNQGSL*SLCGRLTSRSS
Trigger: CGAGGAGCGGGACGTGAGCCTGCCACAGAGCGAGCACAAGGAGCCCTGGTTCATGCGGCTCAACCTGGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000445952.2
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CCA 72 bp CCGCTGGCTTGGCCGCATCGCTCTCCAGCGCGGAGATaGGCCACCAGCTGCAGTTGGTGGGGGTCAGATTGT +
Preference number: 6 (lower is better)
Translates to: PLAWPHRSPARR*ATSCSWWGSDC
Trigger: ACAATCTGACCCCCACCAACTGCAGCTGGTGGCCCATCTCCGCGCTGGAGAGCGATGCGGCCAAGCCAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
CDS CAA 72 bp TCCTCGCCCAGGTTGAGCCGCATGAACCAGGGCTCCTaGTGCTCGCTCTGTGGCAGGCTCACGTCCCGCTCC +
Preference number: 6 (lower is better)
Translates to: SSPRLSRMNQGS*CSLCGRLTSRS
Trigger: GGAGCGGGACGTGAGCCTGCCACAGAGCGAGCACAAGGAGCCCTGGTTCATGCGGCTCAACCTGGGCGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000445952.2
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS GCA 72 bp TCCCCGAGGGTTAGCTCCTCTCAGCTCCAGACTTGCTaGCAGGCGGGGTCCTCCTGTGAAGGTGCGCTCCAC +
Preference number: 6 (lower is better)
Translates to: SPRVSSSQLQTC*QAGSSCEGALH
Trigger: GTGGAGCGCACCTTCACAGGAGGACCCCGCCTGGCAGCAAGTCTGGAGCTGAGAGGAGCTAACCCTCGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS GCA 72 bp CTGTCCCCGAGGGTTAGCTCCTCTCAGCTCCAGACTTaGTGCCAGGCGGGGTCCTCCTGTGAAGGTGCGCTC +
Preference number: 6 (lower is better)
Translates to: LSPRVSSSQLQT*CQAGSSCEGAL
Trigger: GAGCGCACCTTCACAGGAGGACCCCGCCTGGCAGCAAGTCTGGAGCTGAGAGGAGCTAACCCTCGGGGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372952.7
CDS CAA 72 bp TCGCGGTGGATGATGACGGGCACCTCCTCGCCCAGGTaGAGCCGCATGAACCAGGGCTCCTTGTGCTCGCTC +
Preference number: 6 (lower is better)
Translates to: SRWMMTGTSSPR*SRMNQGSLCSL
Trigger: GAGCGAGCACAAGGAGCCCTGGTTCATGCGGCTCAACCTGGGCGAGGAGGTGCCCGTCATCATCCACCGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000445952.2
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CAA 90 bp TTGGCCGCATCGCTCTCCAGCGCGGAGATGGGCCACCAGCTGCAGTaGGTGGGGGTCAGATTGTTGGGGGTCGCCATGACAGCCCGGAAT +
Preference number: 6 (lower is better)
Translates to: LAASLSSAEMGHQLQ*VGVRLLGVAMTARN
Trigger: ATTCCGGGCTGTCATGGCGACCCCCAACAATCTGACCCCCACCAACTGCAGCTGGTGGCCCATCTCCGCGCTGGAGAGCGATGCGGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
CDS CAA 72 bp TCGCTCTCCAGCGCGGAGATGGGCCACCAGCTGCAGTaGGTGGGGGTCAGATTGTTGGGGGTCGCCATGACA +
Preference number: 6 (lower is better)
Translates to: SLSSAEMGHQLQ*VGVRLLGVAMT
Trigger: TGTCATGGCGACCCCCAACAATCTGACCCCCACCAACTGCAGCTGGTGGCCCATCTCCGCGCTGGAGAGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
CDS CAA 90 bp ATGATGTTGTCGCGGTGGATGATGACGGGCACCTCCTCGCCCAGGTaGAGCCGCATGAACCAGGGCTCCTTGTGCTCGCTCTGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: MMLSRWMMTGTSSPR*SRMNQGSLCSLCGR
Trigger: CCTGCCACAGAGCGAGCACAAGGAGCCCTGGTTCATGCGGCTCAACCTGGGCGAGGAGGTGCCCGTCATCATCCACCGCGACAACATCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342560.10
ENST00000372952.7
ENST00000438466.5
ENST00000445952.2
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CAA 90 bp GGCCGGCTGCCATCTTCCCAGTATTTCTTGGACAGTCCCAGGAACTaGAGGCGGTGCAGGGTGGCTCCCAGGAGGACATCAGCGAGGGTG +
Preference number: 6 (lower is better)
Translates to: GRLPSSQYFLDSPRN*RRCRVAPRRTSARV
Trigger: CACCCTCGCTGATGTCCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGATGGCAGCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CAA 90 bp AGCGCGGAGATGGGCCACCAGCTGCAGTTGGTGGGGGTCAGATTGTaGGGGGTCGCCATGACAGCCCGGAATCAGAGGCAGGAAAGAAGG +
Preference number: 6 (lower is better)
Translates to: SAEMGHQLQLVGVRL*GVAMTARNQRQERR
Trigger: CCTTCTTTCCTGCCTCTGATTCCGGGCTGTCATGGCGACCCCCAACAATCTGACCCCCACCAACTGCAGCTGGTGGCCCATCTCCGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000537864.5
ENST00000612599.4
CDS CAA 90 bp TCCAGCGCGGAGATGGGCCACCAGCTGCAGTTGGTGGGGGTCAGATaGTTGGGGGTCGCCATGACAGCCCGGAATCAGAGGCAGGAAAGA +
Preference number: 6 (lower is better)
Translates to: SSAEMGHQLQLVGVR*LGVAMTARNQRQER
Trigger: TCTTTCCTGCCTCTGATTCCGGGCTGTCATGGCGACCCCCAACAATCTGACCCCCACCAACTGCAGCTGGTGGCCCATCTCCGCGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000537864.5
ENST00000612599.4
CDS CAA 90 bp AGCCACAGCTCGCATTTCTGCCTGCGGATCTCGGCCGTGGCGTACTaGGGGATCATGGAGTCGGTGGTGAGCTCGGGATGCAGGATGCAG +
Preference number: 6 (lower is better)
Translates to: SHSSHFCLRISAVAY*GIMESVVSSGCRMQ
Trigger: CTGCATCCTGCATCCCGAGCTCACCACCGACTCCATGATCCCCAAGTACGCCACGGCCGAGATCCGCAGGCAGAAATGCGAGCTGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612599.4
CDS CAA 72 bp ATGGGCCACCAGCTGCAGTTGGTGGGGGTCAGATTGTaGGGGGTCGCCATGACAGCCCGGAATCAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: MGHQLQLVGVRL*GVAMTARNQRQ
Trigger: CTGCCTCTGATTCCGGGCTGTCATGGCGACCCCCAACAATCTGACCCCCACCAACTGCAGCTGGTGGCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
CDS TCA 72 bp AGTAGGCAAAGTAGCCCATCCCACCCAGGGAGCCCATaGGGAAGGACGCCCCGAAGAAGGATGGGGGTTTCC +
Preference number: 6 (lower is better)
Translates to: SRQSSPSHPGSP*GRTPRRRMGVS
Trigger: GGAAACCCCCATCCTTCTTCGGGGCGTCCTTCCTCATGGGCTCCCTGGGTGGGATGGGCTACTTTGCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CCA 72 bp CAGGGAGCCCATGAGGAAGGACGCCCCGAAGAAGGATaGGGGTTTCCTCTTGACCAGCCGGAAAGCATTGGG +
Preference number: 6 (lower is better)
Translates to: QGAHEEGRPEEG*GFPLDQPESIG
Trigger: CCCAATGCTTTCCGGCTGGTCAAGAGGAAACCCCCATCCTTCTTCGGGGCGTCCTTCCTCATGGGCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CAA 90 bp GTGGTGGCATTGGCTAAATGTCTGCGGATCTCGGCCGTGGCGTACTaGGGGATCATGGAGTCGGTGGTGAGCTCGGGATGCAGGATGCAG +
Preference number: 6 (lower is better)
Translates to: VVALAKCLRISAVAY*GIMESVVSSGCRMQ
Trigger: CTGCATCCTGCATCCCGAGCTCACCACCGACTCCATGATCCCCAAGTACGCCACGGCCGAGATCCGCAGACATTTAGCCAATGCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000445952.2
ENST00000537864.5
ENST00000617075.4
CDS CAA 90 bp AAGAAGGACTGCAGGTTGGGCCGGCTGCCATCTTCCCAGTATTTCTaGGACAGTCCCAGGAACTTGAGGCGGTGCAGGGTGGCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: KKDCRLGRLPSSQYF*DSPRNLRRCRVAPR
Trigger: CCTGGGAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS TCA 72 bp TGCAGTTGGTGGGGGTCAGATTGTTGGGGGTCGCCATaGCAGCCCGGAATCAGAGGCAGGAAAGAAGGAGGC +
Preference number: 6 (lower is better)
Translates to: CSWWGSDCWGSP*QPGIRGRKEGG
Trigger: GCCTCCTTCTTTCCTGCCTCTGATTCCGGGCTGTCATGGCGACCCCCAACAATCTGACCCCCACCAACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000537864.5
ENST00000612599.4
CDS GCA 72 bp CAGTATTTCTTGGACAGTCCCAGGAACTTGAGGCGGTaGAGGGTGGCTCCCAGGAGGACATCAGCGAGGGTG +
Preference number: 6 (lower is better)
Translates to: QYFLDSPRNLRR*RVAPRRTSARV
Trigger: CACCCTCGCTGATGTCCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTCCAAGAAATACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CAA 72 bp TGCAGGTTGGGCCGGCTGCCATCTTCCCAGTATTTCTaGGACAGTCCCAGGAACTTGAGGCGGTGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: CRLGRLPSSQYF*DSPRNLRRCRV
Trigger: CACCCTGCACCGCCTCAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGATGGCAGCCGGCCCAACCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CAA 72 bp AAGGATGGGGGTTTCCTCTTGACCAGCCGGAAAGCATaGGGGATGACGGCCGACAGCAGGGTGGTGTGGATG +
Preference number: 6 (lower is better)
Translates to: KDGGFLLTSRKA*GMTADSRVVWM
Trigger: CATCCACACCACCCTGCTGTCGGCCGTCATCCCCAATGCTTTCCGGCTGGTCAAGAGGAAACCCCCATCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CAA 90 bp CGGAAGGCAAAGCGTCTCTGGACCCTCTCAAAGAAGGACTGCAGGTaGGGCCGGCTGCCATCTTCCCAGTATTTCTTGGACAGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: RKAKRLWTLSKKDCR*GRLPSSQYFLDSPR
Trigger: CCTGGGACTGTCCAAGAAATACTGGGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CCA 72 bp ATGTCACCCAGGACTTTCCGGAAGGCAAAGCGTCTCTaGACCCTCTCAAAGAAGGACTGCAGGTTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: MSPRTFRKAKRL*TLSKKDCRLGR
Trigger: CCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTTCCGGAAAGTCCTGGGTGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CCA 72 bp AAAGCATTGGGGATGACGGCCGACAGCAGGGTGGTGTaGATGTCACCCAGGACTTTCCGGAAGGCAAAGCGT +
Preference number: 6 (lower is better)
Translates to: KALGMTADSRVV*MSPRTFRKAKR
Trigger: ACGCTTTGCCTTCCGGAAAGTCCTGGGTGACATCCACACCACCCTGCTGTCGGCCGTCATCCCCAATGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS TCA 72 bp CATCTTCCCAGTATTTCTTGGACAGTCCCAGGAACTTaGGGCGGTGCAGGGTGGCTCCCAGGAGGACATCAG +
Preference number: 6 (lower is better)
Translates to: HLPSISWTVPGT*GGAGWLPGGHQ
Trigger: CTGATGTCCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS GCA 72 bp GGACCCTCTCAAAGAAGGACTGCAGGTTGGGCCGGCTaGCATCTTCCCAGTATTTCTTGGACAGTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: GPSQRRTAGWAG*HLPSISWTVPG
Trigger: TCCTGGGACTGTCCAAGAAATACTGGGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CCA 72 bp TCTTCTCCAGCTCCGCCTCAATCTGGTCCAGCACCATaGCCAGTTCCCCGAGGATCTTCTTCAGGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: SSPAPPQSGPAP*PVPRGSSSGSS
Trigger: TGAGCTACCTGAAGAAGATCCTCGGGGAACTGGCCATGGTGCTGGACCAGATTGAGGCGGAGCTGGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000445952.2
ENST00000447658.1
ENST00000537864.5
ENST00000617075.4
CDS CAA 72 bp CCATCTTCCCAGTATTTCTTGGACAGTCCCAGGAACTaGAGGCGGTGCAGGGTGGCTCCCAGGAGGACATCA +
Preference number: 6 (lower is better)
Translates to: PSSQYFLDSPRN*RRCRVAPRRTS
Trigger: TGATGTCCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS GCA 72 bp AAGGCAAAGCGTCTCTGGACCCTCTCAAAGAAGGACTaGAGGTTGGGCCGGCTGCCATCTTCCCAGTATTTC +
Preference number: 6 (lower is better)
Translates to: KAKRLWTLSKKD*RLGRLPSSQYF
Trigger: GAAATACTGGGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CCA 72 bp AGCGTCTCTGGACCCTCTCAAAGAAGGACTGCAGGTTaGGCCGGCTGCCATCTTCCCAGTATTTCTTGGACA +
Preference number: 6 (lower is better)
Translates to: SVSGPSQRRTAG*AGCHLPSISWT
Trigger: TGTCCAAGAAATACTGGGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CCA 72 bp TTCCATCTTGAGACTTTCCGGAAGGCAAAGCGTCTCTaGACCCTCTCAAAGAAGGACTGCAGGTTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: FHLETFRKAKRL*TLSKKDCRLGR
Trigger: CCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTTCCGGAAAGTCTCAAGATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447658.1
CDS CAA 72 bp TCTTCATGGTCCAGTTTCATGAGGTCCGTGGTGGCATaGGCTAAATGTCTGCGGATCTCGGCCGTGGCGTAC +
Preference number: 6 (lower is better)
Translates to: SSWSSFMRSVVA*AKCLRISAVAY
Trigger: GTACGCCACGGCCGAGATCCGCAGACATTTAGCCAATGCCACCACGGACCTCATGAAACTGGACCATGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342560.10
ENST00000445952.2
ENST00000537864.5
ENST00000617075.4
CDS CAA 72 bp AAGCGTCTCTGGACCCTCTCAAAGAAGGACTGCAGGTaGGGCCGGCTGCCATCTTCCCAGTATTTCTTGGAC +
Preference number: 6 (lower is better)
Translates to: KRLWTLSKKDCR*GRLPSSQYFLD
Trigger: GTCCAAGAAATACTGGGAAGATGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342560.10
ENST00000438466.5
ENST00000447658.1
ENST00000537864.5
ENST00000612599.4
ENST00000617075.4
CDS CAA 90 bp GGTCTCCGGTTATCCAGCCCCATTCAGAGGTACCGGTTAGAGGAGTaGAGTCTTGATGTCGGCTTTGTCCTGTGGAAGAGTTCCCTCAGA +
Preference number: 6 (lower is better)
Translates to: GLRLSSPIQRYRLEE*SLDVGFVLWKSSLR
Trigger: TCTGAGGGAACTCTTCCACAGGACAAAGCCGACATCAAGACTCAACTCCTCTAACCGGTACCTCTGAATGGGGCTGGATAACCGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447658.1
CDS TCA 72 bp CCCCATTCAGAGGTACCGGTTAGAGGAGTTGAGTCTTaGTGTCGGCTTTGTCCTGTGGAAGAGTTCCCTCAG +
Preference number: 6 (lower is better)
Translates to: PHSEVPVRGVES*CRLCPVEEFPQ
Trigger: CTGAGGGAACTCTTCCACAGGACAAAGCCGACATCAAGACTCAACTCCTCTAACCGGTACCTCTGAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447658.1