RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GCNT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000140297

Ensembl transcript IDs: ENST00000396065.3, ENST00000558721.5, ENST00000559189.5, ENST00000559200.1, ENST00000559626.1, ENST00000560111.5, ENST00000560210.1, ENST00000560580.5, ENST00000560585.5, ENST00000560874.5

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAGGAGGACCAAGGACCATCACATCAGCCAGCAGGGGGAGGCCGTaGTCGATCACCACTGCTGGCAACAGACCTCTCAGGGCACACCCA +
Preference number: 1 (lower is better)
Translates to: RGGPRTITSASRGRP*SITTAGNRPLRAHP
Trigger: TGGGTGTGCCCTGAGAGGTCTGTTGCCAGCAGTGGTGATCGATCACGGCCTCCCCCTGCTGGCTGATGTGATGGTCCTTGGTCCTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR GCA 90 bp CTGCACCCAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTaGCCCTTCTACCTCCTTCAGAGGAGGACCAAGGACCATCACATC +
Preference number: 1 (lower is better)
Translates to: LHPGRLFCLLPTVAV*PFYLLQRRTKDHHI
Trigger: GATGTGATGGTCCTTGGTCCTCCTCTGAAGGAGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTGGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR CCA 90 bp CAGAGAATCTGCACCCAGGGAGGCTTTTCTGCCTACTTCCCACGGTaGCCGTGTGCCCCTTCTACCTCCTTCAGAGGAGGACCAAGGACC +
Preference number: 1 (lower is better)
Translates to: QRICTQGGFSAYFPR*PCAPSTSFRGGPRT
Trigger: GGTCCTTGGTCCTCCTCTGAAGGAGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTGGGTGCAGATTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR GCA 90 bp GACCATCACATCAGCCAGCAGGGGGAGGCCGTGATCGATCACCACTaGTGGCAACAGACCTCTCAGGGCACACCCACTGTGTATACAACT +
Preference number: 1 (lower is better)
Translates to: DHHISQQGEAVIDHH*WQQTSQGTPTVYTT
Trigger: AGTTGTATACACAGTGGGTGTGCCCTGAGAGGTCTGTTGCCAGCAGTGGTGATCGATCACGGCCTCCCCCTGCTGGCTGATGTGATGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR CCA 90 bp CATCACATCAGCCAGCAGGGGGAGGCCGTGATCGATCACCACTGCTaGCAACAGACCTCTCAGGGCACACCCACTGTGTATACAACTAGT +
Preference number: 1 (lower is better)
Translates to: HHISQQGEAVIDHHC*QQTSQGTPTVYTTS
Trigger: ACTAGTTGTATACACAGTGGGTGTGCCCTGAGAGGTCTGTTGCCAGCAGTGGTGATCGATCACGGCCTCCCCCTGCTGGCTGATGTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR GCA 90 bp GGGTTAGGGGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTaGAAGGCAAAAGATCTACTTACCCACACTCTAATAGCAGCCCTC +
Preference number: 1 (lower is better)
Translates to: GLGVREQAAFTQAAI*KAKDLLTHTLIAAL
Trigger: GAGGGCTGCTATTAGAGTGTGGGTAAGTAGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACCCCTAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR CCA 90 bp CCCTTGCCCATCACAGAAGAGTATAACTTAGCCAACAACCATCTCTaGAGCTTCGGAAAGGAAACTGTTTCACTAGGTAACACTTGGGAG +
Preference number: 1 (lower is better)
Translates to: PLPITEEYNLANNHL*SFGKETVSLGNTWE
Trigger: CTCCCAAGTGTTACCTAGTGAAACAGTTTCCTTTCCGAAGCTCCAGAGATGGTTGTTGGCTAAGTTATACTCTTCTGTGATGGGCAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR GCA 90 bp GCATATCGTATGCAGAAGATGAGCTGTACTATATTCAAAGGGCACTaGCTATGTTTTTATAGTATCCCTTGCCCATCACAGAAGAGTATA +
Preference number: 1 (lower is better)
Translates to: AYRMQKMSCTIFKGH*LCFYSIPCPSQKSI
Trigger: TATACTCTTCTGTGATGGGCAAGGGATACTATAAAAACATAGGCAGTGCCCTTTGAATATAGTACAGCTCATCTTCTGCATACGATATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR-3UTR TCA 90 bp CAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTGCCCCTTCTACCTCCAGGCAGAGGCTTCAGTaGGCCAAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: QGGFSAYFPRWPCAPSTSRQRLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGAAGCCTCTGCCT...GGAGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR-3UTR CCA 90 bp CAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTGCCCCTTCTACCTCCGGCAGCTCCACAGAATaGAAAAGCTACCAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: QGGFSAYFPRWPCAPSTSGSSTE*KSYQQA
Trigger: TGCCTGCTGGTAGCTTTTCCATTCTGTGGAGCTGCC...GGAGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR-3UTR CCA 90 bp CCCAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTGCCCCTTCTACCTTCACTAGGTAACACTTaGGAGGTAGCGTGCTGTATG +
Preference number: 2 (lower is better)
Translates to: PREAFLPTSHGGRVPLLPSLGNT*EVACCM
Trigger: CATACAGCACGCTACCTCCCAAGTGTTACCTAGTGA...AGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR-3UTR GCA 90 bp GAGGAGGACCAAGGACCATCACATCAGCCAGCAGGGGGAGGCCGTGATCGATCAACTTGGGAGGTAGCGTaGTGTATGTGTGTATACATA +
Preference number: 2 (lower is better)
Translates to: EEDQGPSHQPAGGGRDRSTWEVA*CMCVYI
Trigger: TATGTATACACACATACAGCACGCTACCTCCCAAGT...TGATCGATCACGGCCTCCCCCTGCTGGCTGATGTGATGGTCCTTGGTCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR-3UTR GCA 90 bp GAGGAGGACCAAGGACCATCACATCAGCCAGCAGGGGGAGGCCGTGATCGATCAAGGACTCTATTACAATaGAGGCAAGTTGGTAGTGAC +
Preference number: 2 (lower is better)
Translates to: EEDQGPSHQPAGGGRDRSRTLLQ*RQVGSD
Trigger: GTCACTACCAACTTGCCTGCATTGTAATAGAGTCCT...TGATCGATCACGGCCTCCCCCTGCTGGCTGATGTGATGGTCCTTGGTCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR-3UTR CCA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCCGAATTGCAAAGCCCTaGTCTCCCACCCACACTGTC +
Preference number: 2 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFRIAKP*SPTHTV
Trigger: GACAGTGTGGGTGGGAGACCAGGGCTTTGCAATTCG...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR CAA 90 bp AGGGTTAGGGGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTaGCAAGGCAAAAGATCTACTTACCCACACTCTAATAGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: RVRGERTSSIHPGSN*QGKRSTYPHSNSSP
Trigger: AGGGCTGCTATTAGAGTGTGGGTAAGTAGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACCCCTAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR-3UTR GCA 90 bp AAGGGAAGGTTCTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATAAGGATGCCACGAATTaGAAAGCCCTGGTCTCCCAC +
Preference number: 2 (lower is better)
Translates to: KGRFSFHQSSPPRYQTWNKDATN*KALVSH
Trigger: GTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTT...ATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAGAACCTTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR-3UTR TCA 90 bp AAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACATGTCCCAGCAAGTTCTaGGCATGTTTGTACATGCTC +
Preference number: 2 (lower is better)
Translates to: KVLLHATKPGIIRNGSSTCPSKF*ACLYML
Trigger: GAGCATGTACAAACATGCTCAGAACTTGCTGGGACA...TGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR-3UTR GCA 90 bp TTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGAGCATGTTTGTACATaGTCTTGCCCCACAGGTAGC +
Preference number: 2 (lower is better)
Translates to: FPSKFSSTLPNLELLGTAEHVCT*SCPTGS
Trigger: GCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC...TGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR-3UTR TCA 90 bp TTAGTGAGAAAGTTAGTGGAGGAACTACTAGGGTTAGGGGTGAGAGAACAAGCATGTCCCAGCAAGTTCTaGGCATGTTTGTACATGCTC +
Preference number: 2 (lower is better)
Translates to: LVRKLVEELLGLGVREQACPSKF*ACLYML
Trigger: GAGCATGTACAAACATGCTCAGAACTTGCTGGGACA...TGCTTGTTCTCTCACCCCTAACCCTAGTAGTTCCTCCACTAACTTTCTCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR-3UTR GCA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAAGTTTGTACATGCTCTTaGCCCACAGGTAGCAACGCT +
Preference number: 2 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEEVCTCS*PTGSNA
Trigger: AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAAC...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR-3UTR CCA 90 bp TGTATACAACTAGTCATCAGTCATCTCCGTAGTGGGGTTGGGAGCAAAGTGAATGTCAGCCACCACACCTaGCCAAAAGTAACTACCTTA +
Preference number: 2 (lower is better)
Translates to: CIQLVISHLRSGVGSKVNVSHHT*PKVTTL
Trigger: TAAGGTAGTTACTTTTGGCCAGGTGTGGTGGCTGAC...ATTCACTTTGCTCCCAACCCCACTACGGAGATGACTGATGACTAGTTGTATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR-3UTR GCA 90 bp AAAGCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCACCCAGGCAGCAATTTaGAAGGCAAAAGATCTACTT +
Preference number: 2 (lower is better)
Translates to: KATSRHSTEIKCSTTYPSTQAAI*KAKDLL
Trigger: AAGTAGATCTTTTGCCTTGCAAATTGCTGCCTGGGT...GGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR-3UTR GCA 90 bp TATAAATCACCTTTCCAGGGCATATCGTATGCAGAAGATGAGCTGTACTATATTGTTTGTACATGCTCTTaGCCCACAGGTAGCAACGCT +
Preference number: 2 (lower is better)
Translates to: YKSPFQGISYAEDELYYIVCTCS*PTGSNA
Trigger: AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAAC...AATATAGTACAGCTCATCTTCTGCATACGATATGCCCTGGAAAGGTGATTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR-3UTR CCA 90 bp GTATTTACACATACCTTATTGTCTCCCCGCAAGGAAATGTGTAATCTGCAGAATGAAAGGTGGTCAAACTaGTTAAATCACCCTGCCTTT +
Preference number: 2 (lower is better)
Translates to: VFTHTLLSPRKEMCNLQNERWSN*LNHPAF
Trigger: AAAGGCAGGGTGATTTAACCAGTTTGACCACCTTTC...ATTCTGCAGATTACACATTTCCTTGCGGGGAGACAATAAGGTATGTGTAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR GCA 72 bp ATCAGCCAGCAGGGGGAGGCCGTGATCGATCACCACTaGTGGCAACAGACCTCTCAGGGCACACCCACTGTG +
Preference number: 3 (lower is better)
Translates to: ISQQGEAVIDHH*WQQTSQGTPTV
Trigger: CACAGTGGGTGTGCCCTGAGAGGTCTGTTGCCAGCAGTGGTGATCGATCACGGCCTCCCCCTGCTGGCTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR TCA 72 bp CCAAGGACCATCACATCAGCCAGCAGGGGGAGGCCGTaGTCGATCACCACTGCTGGCAACAGACCTCTCAGG +
Preference number: 3 (lower is better)
Translates to: PRTITSASRGRP*SITTAGNRPLR
Trigger: CCTGAGAGGTCTGTTGCCAGCAGTGGTGATCGATCACGGCCTCCCCCTGCTGGCTGATGTGATGGTCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR GCA 72 bp GGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTaGCCCTTCTACCTCCTTCAGAGGAGGACCAAGGAC +
Preference number: 3 (lower is better)
Translates to: GRLFCLLPTVAV*PFYLLQRRTKD
Trigger: GTCCTTGGTCCTCCTCTGAAGGAGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR CCA 72 bp AGCCAGCAGGGGGAGGCCGTGATCGATCACCACTGCTaGCAACAGACCTCTCAGGGCACACCCACTGTGTAT +
Preference number: 3 (lower is better)
Translates to: SQQGEAVIDHHC*QQTSQGTPTVY
Trigger: ATACACAGTGGGTGTGCCCTGAGAGGTCTGTTGCCAGCAGTGGTGATCGATCACGGCCTCCCCCTGCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR CCA 72 bp TGCACCCAGGGAGGCTTTTCTGCCTACTTCCCACGGTaGCCGTGTGCCCCTTCTACCTCCTTCAGAGGAGGA +
Preference number: 3 (lower is better)
Translates to: CTQGGFSAYFPR*PCAPSTSFRGG
Trigger: TCCTCCTCTGAAGGAGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTGGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR GCA 72 bp AATAGCAGCCCTCTTATCCTAAAGGATGCCACGAATTaGAAAGCCCTGGTCTCCCACCCACACTGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: NSSPLILKDATN*KALVSHPHCPS
Trigger: GCTGGGACAGTGTGGGTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGGGCTGCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR GCA 72 bp CACACTGTCCCAGCAAGTTCTGAGCATGTTTGTACATaGTCTTGCCCCACAGGTAGCAACGCTCTCATAGTG +
Preference number: 3 (lower is better)
Translates to: HTVPASSEHVCT*SCPTGSNALIV
Trigger: CACTATGAGAGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGGGACAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR-3UTR CAA 90 bp TCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCAAAAGGATGCCACGAATaGCAAAGCCCTGGTCTCCCA +
Preference number: 3 (lower is better)
Translates to: SKFSSTLPNLELLGTAAPKGCHE*QSPGLP
Trigger: TGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTT...TGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR-3UTR CAA 90 bp TCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACACCCAGGCAGCAATTaGCAAGGCAAAAGATCTACT +
Preference number: 3 (lower is better)
Translates to: SKFSSTLPNLELLGTAAPHPGSN*QGKRST
Trigger: AGTAGATCTTTTGCCTTGCAAATTGCTGCCTGGGTG...TGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR-3UTR CAA 90 bp TCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCCACCCAGGCAGCAATTaGCAAGGCAAAAGATCTACT +
Preference number: 3 (lower is better)
Translates to: SIKVLLHATKPGIIRNGSHPGSN*QGKRST
Trigger: AGTAGATCTTTTGCCTTGCAAATTGCTGCCTGGGTG...GCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR-3UTR CAA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAAAAAGGATGCCACGAATaGCAAAGCCCTGGTCTCCCA +
Preference number: 3 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEEKGCHE*QSPGLP
Trigger: TGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTT...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR TCA 72 bp TCATCAGTCATCTCCGTAGTGGGGTTGGGAGCAAAGTaGATAGGACTCTATTACAATGCAGGCAAGTTGGTA +
Preference number: 3 (lower is better)
Translates to: SSVISVVGLGAK*IGLYYNAGKLV
Trigger: TACCAACTTGCCTGCATTGTAATAGAGTCCTATTCACTTTGCTCCCAACCCCACTACGGAGATGACTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR TCA 72 bp GCAGAATCACTAATAGCGATCCTTCCATTCGCATTCTaGAATAAGAGTTTTGACTCAAGAGGGGACCAGGCA +
Preference number: 3 (lower is better)
Translates to: AESLIAILPFAF*NKSFDSRGDQA
Trigger: TGCCTGGTCCCCTCTTGAGTCAAAACTCTTATTTCAGAATGCGAATGGAAGGATCGCTATTAGTGATTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR GCA 72 bp GTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTaGAAGGCAAAAGATCTACTTACCCACACTCTAATA +
Preference number: 3 (lower is better)
Translates to: VREQAAFTQAAI*KAKDLLTHTLI
Trigger: TATTAGAGTGTGGGTAAGTAGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
3UTR CCA 72 bp AGCTTCGGAAAGGAAACTGTTTCACTAGGTAACACTTaGGAGGTAGCGTGCTGTATGTGTGTATACATACAC +
Preference number: 3 (lower is better)
Translates to: SFGKETVSLGNT*EVACCMCVYIH
Trigger: GTGTATGTATACACACATACAGCACGCTACCTCCCAAGTGTTACCTAGTGAAACAGTTTCCTTTCCGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR GCA 72 bp ATACCTTATTGTCTCCCCGCAAGGAAATGTGTAATCTaGAGAATCACTAATAGCGATCCTTCCATTCGCATT +
Preference number: 3 (lower is better)
Translates to: IPYCLPARKCVI*RITNSDPSIRI
Trigger: AATGCGAATGGAAGGATCGCTATTAGTGATTCTGCAGATTACACATTTCCTTGCGGGGAGACAATAAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR TCA 72 bp GTGCAGACTCTCCCCCTACAAAAACATGTTCCACTTTaGATAATGAATTACACATTACCTTACCTGATTGGC +
Preference number: 3 (lower is better)
Translates to: VQTLPLQKHVPL*IMNYTLPYLIG
Trigger: GCCAATCAGGTAAGGTAATGTGTAATTCATTATTCAAAGTGGAACATGTTTTTGTAGGGGGAGAGTCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR TCA 90 bp CCCAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTGCCCCTTCTACCTATCCACCGTGCACGCTaGAGGGTGGCCCAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: PREAFLPTSHGGRVPLLPIHRAR*RVAQRC
Trigger: ACACCTCTGGGCCACCCTTCAGCGTGCACGGTGGAT...AGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR TCA 90 bp CCCAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTGCCCCTTCTACCTGGTGGGAGTATCGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PREAFLPTSHGGRVPLLPGGSIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCGATACTCCCACC...AGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp GAGGAGGACCAAGGACCATCACATCAGCCAGCAGGGGGAGGCCGTGATCGATCACCAGGGAGGCTTTTCTaGCTACTTCCCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EEDQGPSHQPAGGGRDRSPGRLF*LLPTVA
Trigger: GGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTGG...TGATCGATCACGGCCTCCCCCTGCTGGCTGATGTGATGGTCCTTGGTCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp CCCAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTGCCCCTTCTACCTCAGATAGCCCGCTGGTaGATTCCAGAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PREAFLPTSHGGRVPLLPQIARW*IPEQGA
Trigger: TGCTCCCTGCTCTGGAATCCACCAGCGGGCTATCTG...AGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp CAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTGCCCCTTCTACCTCCAGCCAGACATGGTGCTaGATGCCTGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QGGFSAYFPRWPCAPSTSSQTWC*MPVVPA
Trigger: AGCTGGGACTACAGGCATGCAGCACCATGTCTGGCT...GGAGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp CCCAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTGCCCCTTCTACCTGGTCAGCTTGCACCCTaGACCAGGAGGCATAAACCA +
Preference number: 4 (lower is better)
Translates to: PREAFLPTSHGGRVPLLPGQLAP*TRRHKP
Trigger: TGGTTTATGCCTCCTGGTCCAGGGTGCAAGCTGACC...AGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp CCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCACCCACACGCCAGGCATCCACCGTaGACGCTGAAGGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PLILKDATNCKALVSHPHARHPP*TLKGGP
Trigger: TGGGCCACCCTTCAGCGTGCACGGTGGATGCCTGGC...GTGTGGGTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp GAGGAGGACCAAGGACCATCACATCAGCCAGCAGGGGGAGGCCGTGATCGATCAAAGGATGCCACGAATTaGAAAGCCCTGGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: EEDQGPSHQPAGGGRDRSKDATN*KALVSH
Trigger: GTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTT...TGATCGATCACGGCCTCCCCCTGCTGGCTGATGTGATGGTCCTTGGTCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp CCCAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTGCCCCTTCTACCTGACTCCAGACCCAAGTaGTCAGAGTCACACTTCAAC +
Preference number: 4 (lower is better)
Translates to: PREAFLPTSHGGRVPLLPDSRPK*SESHFN
Trigger: GTTGAAGTGTGACTCTGACCACTTGGGTCTGGAGTC...AGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR TCA 90 bp GAGGAGGACCAAGGACCATCACATCAGCCAGCAGGGGGAGGCCGTGATCGATCATTATTCAGAATAGCCTaGAGCACTGCCTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: EEDQGPSHQPAGGGRDRSLFRIA*STASWS
Trigger: GGACCAAGAGGCAGTGCTTCAGGCTATTCTGAATAA...TGATCGATCACGGCCTCCCCCTGCTGGCTGATGTGATGGTCCTTGGTCCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR TCA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCAGCAGGGGGAGGCCGTaGTCGATCACCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFSRGRP*SITTAG
Trigger: GCCAGCAGTGGTGATCGATCACGGCCTCCCCCTGCT...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR TCA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAAATCCACCGTGCACGCTaGAGGGTGGCCCAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKIHRAR*RVAQRC
Trigger: ACACCTCTGGGCCACCCTTCAGCGTGCACGGTGGAT...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp CCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCACCCACACAGGCAGAGGCTTCAGTaGGCCAAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: PLILKDATNCKALVSHPHRQRLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGAAGCCTCTGCCT...GTGTGGGTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp AAGGGAAGGTTCTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATGCCAGGCATCCACCGTaGACGCTGAAGGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KGRFSFHQSSPPRYQTWNARHPP*TLKGGP
Trigger: TGGGCCACCCTTCAGCGTGCACGGTGGATGCCTGGC...ATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAGAACCTTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCGTACTTGGGGTGGTTaGGAACAGAGCCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: PASSEHVCTCSCPTGSNARTWGG*EQSQAS
Trigger: GGATGCCTGGCTCTGTTCCCAACCACCCCAAGTACG...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp TCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCGCCTACTTCCCACGGTaGCCGTGTGCCCCTTCTACC +
Preference number: 4 (lower is better)
Translates to: SIKVLLHATKPGIIRNGSAYFPR*PCAPST
Trigger: GGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGC...GCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR TCA 90 bp TCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGATCGATGTCTCCCTCATaGCCCTGCCACTTGACCAGC +
Preference number: 4 (lower is better)
Translates to: SSTLPNLELLGTAAPQNGSMSPS*PCHLTS
Trigger: GCTGGTCAAGTGGCAGGGTCATGAGGGAGACATCGA...TCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCTGGGAGGCGGAGGTTaGAGTGAACTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: PASSEHVCTCSCPTGSNALGGGG*SELRLH
Trigger: GTGCAATCTCAGTTCACTGCAACCTCCGCCTCCCAG...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp TCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAGTGCACGCTGAAGGGTaGCCCAGAGGTGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: SSTLPNLELLGTAAPQNGVHAEG*PRGVHL
Trigger: CAGATGAACACCTCTGGGCCACCCTTCAGCGTGCAC...TCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp ACACTGTCCCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGTGCACGCTGAAGGGTaGCCCAGAGGTGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: TLSQQVLSMFVHALAPQVVHAEG*PRGVHL
Trigger: CAGATGAACACCTCTGGGCCACCCTTCAGCGTGCAC...TACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGGGACAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GGGGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCCCTCGGGTGACCCCTaGACAGTTGATAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: GVREQAAFTQAAICKAKDPSGDP*TVDRPL
Trigger: AAGAGGTCTATCAACTGTTCAGGGGTCACCCGAGGG...ATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTGCTCACAGTCTCTGGTaGGGGAGAGGTAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSAHSLW*GRGSGC
Trigger: ACACCCACTACCTCTCCCTCACCAGAGACTGTGAGC...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCATCGATGTCTCCCTCATaGCCCTGCCACTTGACCAGC +
Preference number: 4 (lower is better)
Translates to: SKFSSTLPNLELLGTAAPSMSPS*PCHLTS
Trigger: GCTGGTCAAGTGGCAGGGTCATGAGGGAGACATCGA...TGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCAGGCAGGTGGATCACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: SKFSSTLPNLELLGTAAPGRWIT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTGATCCACCTGCC...TGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp CCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCACCCACACGTTTGTACATGCTCTTaGCCCACAGGTAGCAACGCT +
Preference number: 4 (lower is better)
Translates to: PLILKDATNCKALVSHPHVCTCS*PTGSNA
Trigger: AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAAC...GTGTGGGTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCCAGATAGCCCGCTGGTaGATTCCAGAGCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFQIARW*IPEQGA
Trigger: TGCTCCCTGCTCTGGAATCCACCAGCGGGCTATCTG...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp TCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCACGCAGATAGCCCGCTaGTGGATTCCAGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SIKVLLHATKPGIIRNGSTQIAR*WIPEQG
Trigger: TCCCTGCTCTGGAATCCACCAGCGGGCTATCTGCGT...GCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp TCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGACGAATTGCAAAGCCCTaGTCTCCCACCCACACTGTC +
Preference number: 4 (lower is better)
Translates to: SSTLPNLELLGTAAPQNGRIAKP*SPTHTV
Trigger: GACAGTGTGGGTGGGAGACCAGGGCTTTGCAATTCG...TCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp AATAGCAGCCCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCCGTGGCAGCAAATGTaGACAACCATGTCCCCTGAT +
Preference number: 4 (lower is better)
Translates to: NSSPLILKDATNCKALVSPWQQM*TTMSPD
Trigger: ATCAGGGGACATGGTTGTTCACATTTGCTGCCACGG...GGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGGGCTGCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp AAGGGAAGGTTCTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATGCTCACAGTCTCTGGTaGGGGAGAGGTAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: KGRFSFHQSSPPRYQTWNAHSLW*GRGSGC
Trigger: ACACCCACTACCTCTCCCTCACCAGAGACTGTGAGC...ATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAGAACCTTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTACACAGTATATGTTCTaGGGGGCATACACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: PASSEHVCTCSCPTGSNATQYMF*GAYTAR
Trigger: GCGAGCTGTGTATGCCCCTCAGAACATATACTGTGT...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTAGTCTTCCATGCAGTTaGGGTCAGCTTGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSSLPCS*GQLAPW
Trigger: CCAGGGTGCAAGCTGACCTCAACTGCATGGAAGACT...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GGGGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTTAGGAGGTACCTCTaGCTCCATGCTATTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GVREQAAFTQAAICKAKDLRRYL*LHAIPP
Trigger: GGGAGGAATAGCATGGAGTCAGAGGTACCTCCTAAG...ATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp CCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCACCCACACTGTCCCAGCAAGTTCTaGGCATGTTTGTACATGCTC +
Preference number: 4 (lower is better)
Translates to: PLILKDATNCKALVSHPHCPSKF*ACLYML
Trigger: GAGCATGTACAAACATGCTCAGAACTTGCTGGGACA...GTGTGGGTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GAGGAGGACCAAGGACCATCACATCAGCCAGCAGGGGGAGGCCGTGATCGATCACTTCCATTCGCATTCTaGAATAAGAGTTTTGACTCA +
Preference number: 4 (lower is better)
Translates to: EEDQGPSHQPAGGGRDRSLPFAF*NKSFDS
Trigger: TGAGTCAAAACTCTTATTTCAGAATGCGAATGGAAG...TGATCGATCACGGCCTCCCCCTGCTGGCTGATGTGATGGTCCTTGGTCCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCTTTCAGCCTTGAAGTaGTCACAGTCTCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PASSEHVCTCSCPTGSNALSALK*SQSLVR
Trigger: CCTCACCAGAGACTGTGAGCACTTCAAGGCTGAAAG...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAACCCACGGTGGCCGTGTaGCCCTTCTACCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEEPTVAV*PFYLLQ
Trigger: CTGAAGGAGGTAGAAGGGGCACACGGCCACCGTGGG...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp AAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAAGAATGGGAGACAGGTaGAGACCGAGCACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: KVLLHATKPGIIRNGSSTRMGDR*RPSTGK
Trigger: CTTCCCTGTGCTCGGTCTCCACCTGTCTCCCATTCT...TGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCCACGGCACTGAGCTCTaGAGCAAGTCTTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFHGTEL*SKSSMQ
Trigger: CTGCATGGAAGACTTGCTCCAGAGCTCAGTGCCGTG...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTATGTCGTACTTGGGGTaGTTGGGAACAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSMSYLG*LGTEPG
Trigger: GCCTGGCTCTGTTCCCAACCACCCCAAGTACGACAT...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp GGGGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTGAGATGTCGTACTTaGGGTGGTTGGGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: GVREQAAFTQAAICKAKDLRCRT*GGWEQS
Trigger: GCTCTGTTCCCAACCACCCCAAGTACGACATCTCAG...ATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAACGAATTGCAAAGCCCTaGTCTCCCACCCACACTGTC +
Preference number: 4 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKRIAKP*SPTHTV
Trigger: GACAGTGTGGGTGGGAGACCAGGGCTTTGCAATTCG...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACCGTGGCAGCAAATGTaGACAACCATGTCCCCTGAT +
Preference number: 4 (lower is better)
Translates to: SKFSSTLPNLELLGTAAPPWQQM*TTMSPD
Trigger: ATCAGGGGACATGGTTGTTCACATTTGCTGCCACGG...TGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GGGGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATGATTCTGTTTCCAAGTaGAGACTGGCGGTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: GVREQAAFTQAAICKAKDDSVSK*RLAVFR
Trigger: ACGGAACACCGCCAGTCTTCACTTGGAAACAGAATC...ATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp CCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCACCCACACTCTCTTCACAAGGCGTaGTTCTGTTTCCAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: PLILKDATNCKALVSHPHSLHKA*FCFQVK
Trigger: CTTCACTTGGAAACAGAATCACGCCTTGTGAAGAGA...GTGTGGGTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAAGGTAGTGGGTGTCTGTaGAAGGCTCTCGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKGSGCL*KALASS
Trigger: AGAAGAAGCGAGAGCCTTTCACAGACACCCACTACC...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCTCATAGTGTGTACACAGTATATGTTCTaGGGGGCATACACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: EHVCTCSCPTGSNALIVCTQYMF*GAYTAR
Trigger: GCGAGCTGTGTATGCCCCTCAGAACATATACTGTGT...ACACACTATGAGAGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCCAGCTTACTGGCTATaGAGACATTTGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: PASSEHVCTCSCPTGSNAPAYWL*RHLGSK
Trigger: CTTGCTTCCCAAATGTCTTCATAGCCAGTAAGCTGG...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAATTGAGGCCAGGAGTTTaGGACCAACCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKLRPGV*DQPGQH
Trigger: ATGTTGGCCAGGTTGGTCTCAAACTCCTGGCCTCAA...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR TCA 90 bp ACACTGTCCCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAATTCAGGGAGGTCAGTaGGGCAGGAAGAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: TLSQQVLSMFVHALAPQVIQGGQ*GRKNAL
Trigger: CAAAGCATTCTTCCTGCCTCACTGACCTCCCTGAAT...TACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGGGACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560585.5
CDS-3UTR GCA 90 bp ACACTGTCCCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTACTTTCAGCCTTGAAGTaGTCACAGTCTCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TLSQQVLSMFVHALAPQVLSALK*SQSLVR
Trigger: CCTCACCAGAGACTGTGAGCACTTCAAGGCTGAAAG...TACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGGGACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp ACACTGTCCCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTACAGCGGGTTTCTTTGTaGTTAGGAGGTACCTCTGAC +
Preference number: 4 (lower is better)
Translates to: TLSQQVLSMFVHALAPQVQRVSL*LGGTSD
Trigger: GTCAGAGGTACCTCCTAAGCACAAAGAAACCCGCTG...TACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGGGACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp TCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCAAGGATGCCACGAATTaGAAAGCCCTGGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SIKVLLHATKPGIIRNGSKDATN*KALVSH
Trigger: GTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTT...GCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp GAGGAGGACCAAGGACCATCACATCAGCCAGCAGGGGGAGGCCGTGATCGATCAAAAAATTGCTATTCATaGAGCTTGTCAGGACCATTT +
Preference number: 4 (lower is better)
Translates to: EEDQGPSHQPAGGGRDRSKNCYS*SLSGPF
Trigger: AAATGGTCCTGACAAGCTGCATGAATAGCAATTTTT...TGATCGATCACGGCCTCCCCCTGCTGGCTGATGTGATGGTCCTTGGTCCTCCTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTACGATCTCAGCTCACTaGAACCTCTGCCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSTISAH*NLCLPC
Trigger: ACATGGGAGGCAGAGGTTGCAGTGAGCTGAGATCGT...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTGCAGGAAGAATGCTTTaGCAGGCGTCAGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSAGRML*QASAWS
Trigger: AGACCAAGCTGACGCCTGGCAAAGCATTCTTCCTGC...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560585.5
CDS-3UTR CCA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAATTTCCAAGTGAAGACTaGCGGTGTTCCGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKFPSED*RCSVAA
Trigger: TGCTGCCACGGAACACCGCCAGTCTTCACTTGGAAA...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTTTTCCAAGTGAAGACTaGCGGTGTTCCGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSFPSED*RCSVAA
Trigger: TGCTGCCACGGAACACCGCCAGTCTTCACTTGGAAA...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCACCATCGTCACAGAATaGGAGACAGGTGGAGACCGA +
Preference number: 4 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFTIVTE*ETGGDR
Trigger: TCGGTCTCCACCTGTCTCCCATTCTGTGACGATGGT...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp AATAGCAGCCCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCGACTCCAGACCCAAGTaGTCAGAGTCACACTTCAAC +
Preference number: 4 (lower is better)
Translates to: NSSPLILKDATNCKALVSDSRPK*SESHFN
Trigger: GTTGAAGTGTGACTCTGACCACTTGGGTCTGGAGTC...GGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGGGCTGCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp AAAGCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCGGTCAGCTTGCACCCTaGACCAGGAGGCATAAACCA +
Preference number: 4 (lower is better)
Translates to: KATSRHSTEIKCSTTYPSGQLAP*TRRHKP
Trigger: TGGTTTATGCCTCCTGGTCCAGGGTGCAAGCTGACC...GGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTAACATCTTGAGAGCCTaGACCATCTCTGCATTGCTC +
Preference number: 4 (lower is better)
Translates to: PASSEHVCTCSCPTGSNANILRA*TISALL
Trigger: GAGCAATGCAGAGATGGTCCAGGCTCTCAAGATGTT...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp CTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGCGTACTTGGGGTGGTTaGGAACAGAGCCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: LFPSKFSSTLPNLELLGTRTWGG*EQSQAS
Trigger: GGATGCCTGGCTCTGTTCCCAACCACCCCAAGTACG...CGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp AAAGCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCATGTCGTACTTGGGGTaGTTGGGAACAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KATSRHSTEIKCSTTYPSMSYLG*LGTEPG
Trigger: GCCTGGCTCTGTTCCCAACCACCCCAAGTACGACAT...GGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp TCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCGGCAGCTCCACAGAATaGAAAAGCTACCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SIKVLLHATKPGIIRNGSGSSTE*KSYQQA
Trigger: TGCCTGCTGGTAGCTTTTCCATTCTGTGGAGCTGCC...GCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GGGGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCAGAGTCTCTTCCATTaGACCATCGTCACAGAATGG +
Preference number: 4 (lower is better)
Translates to: GVREQAAFTQAAICKAKDQSLFH*TIVTEW
Trigger: CCATTCTGTGACGATGGTTCAATGGAAGAGACTCTG...ATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCTCATAGTGTGTTTATTCAGAATAGCCTaGAGCACTGCCTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: EHVCTCSCPTGSNALIVCLFRIA*STASWS
Trigger: GGACCAAGAGGCAGTGCTTCAGGCTATTCTGAATAA...ACACACTATGAGAGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAAACTTCCTTTCAGCCTTaGAGTGCTCACAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKTSFQP*SAHSLW
Trigger: CCAGAGACTGTGAGCACTTCAAGGCTGAAAGGAAGT...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGACCAGCTTACTGGCTATaGAGACATTTGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SSTLPNLELLGTAAPQNGPAYWL*RHLGSK
Trigger: CTTGCTTCCCAAATGTCTTCATAGCCAGTAAGCTGG...TCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCTCATAGTGTGTCAGCAGGCATTCAACTaGAATCAAGTGCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: EHVCTCSCPTGSNALIVCQQAFN*NQVLYH
Trigger: GTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTG...ACACACTATGAGAGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTACCTGGCCAACATGGTaGAACCCCATCTTTACTAAA +
Preference number: 4 (lower is better)
Translates to: PASSEHVCTCSCPTGSNATWPTW*NPIFTK
Trigger: TTTAGTAAAGATGGGGTTTCACCATGTTGGCCAGGT...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp TCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCCAGCGGGTTTCTTTGTaGTTAGGAGGTACCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SIKVLLHATKPGIIRNGSQRVSL*LGGTSD
Trigger: GTCAGAGGTACCTCCTAAGCACAAAGAAACCCGCTG...GCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp TGTATACAACTAGTCATCAGTCATCTCCGTAGTGGGGTTGGGAGCAAAGTGAATAGAATGGGAGACAGGTaGAGACCGAGCACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CIQLVISHLRSGVGSKVNRMGDR*RPSTGK
Trigger: CTTCCCTGTGCTCGGTCTCCACCTGTCTCCCATTCT...ATTCACTTTGCTCCCAACCCCACTACGGAGATGACTGATGACTAGTTGTATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp CTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGCACGGCACTGAGCTCTaGAGCAAGTCTTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: LFPSKFSSTLPNLELLGTHGTEL*SKSSMQ
Trigger: CTGCATGGAAGACTTGCTCCAGAGCTCAGTGCCGTG...CGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp CCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCACCCACACCCAGAGGTGTTCATCTaGGCTATAAGTGTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: PLILKDATNCKALVSHPHPEVFI*AISVFY
Trigger: GTAAAAGACACTTATAGCCCAGATGAACACCTCTGG...GTGTGGGTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp AAGGGAAGGTTCTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATCTGAGATGTCGTACTTaGGGTGGTTGGGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: KGRFSFHQSSPPRYQTWNLRCRT*GGWEQS
Trigger: GCTCTGTTCCCAACCACCCCAAGTACGACATCTCAG...ATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAGAACCTTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAAACGCAGATAGCCCGCTaGTGGATTCCAGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEETQIAR*WIPEQG
Trigger: TCCCTGCTCTGGAATCCACCAGCGGGCTATCTGCGT...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAACCCTCGGGTGACCCCTaGACAGTTGATAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEEPSGDP*TVDRPL
Trigger: AAGAGGTCTATCAACTGTTCAGGGGTCACCCGAGGG...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCGCTCTCGCTTCTTCTTaGCCTCCAGGTTATTCAGAA +
Preference number: 4 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFALASS*PPGYSE
Trigger: TTCTGAATAACCTGGAGGTCAAGAAGAAGCGAGAGC...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGGTAGTGGGTGTCTGTaGAAGGCTCTCGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FPSKFSSTLPNLELLGTAGSGCL*KALASS
Trigger: AGAAGAAGCGAGAGCCTTTCACAGACACCCACTACC...TGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGTATTTCCACGGCACTaGGCTCTGGAGCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: FPSKFSSTLPNLELLGTAVFPRH*ALEQVF
Trigger: GAAGACTTGCTCCAGAGCTCAGTGCCGTGGAAATAC...TGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCACTTAGGAGGTACCTCTaGCTCCATGCTATTCCTCCC +
Preference number: 4 (lower is better)
Translates to: FPSKFSSTLPNLELLGTALRRYL*LHAIPP
Trigger: GGGAGGAATAGCATGGAGTCAGAGGTACCTCCTAAG...TGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCTCATAGTGTGTCTCACTACCTCAAAGTaGTATTTCCAGCGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: EHVCTCSCPTGSNALIVCLTTSK*YFQRVS
Trigger: AGAAACCCGCTGGAAATATCACTTTGAGGTAGTGAG...ACACACTATGAGAGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp AATAGCAGCCCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCTCACTACCTCAAAGTaGTATTTCCAGCGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: NSSPLILKDATNCKALVSLTTSK*YFQRVS
Trigger: AGAAACCCGCTGGAAATATCACTTTGAGGTAGTGAG...GGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGGGCTGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCTCATAGTGTGTAATAGAAGTCATGTCTaGGATGTCGTACTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: EHVCTCSCPTGSNALIVCNRSHV*DVVLGV
Trigger: CACCCCAAGTACGACATCTCAGACATGACTTCTATT...ACACACTATGAGAGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TTAGTGAGAAAGTTAGTGGAGGAACTACTAGGGTTAGGGGTGAGAGAACAAGCAGGCAAGTGGATCACTTaGGGTCAGGAGTTCAGACCA +
Preference number: 4 (lower is better)
Translates to: LVRKLVEELLGLGVREQAGKWIT*GQEFRP
Trigger: TGGTCTGAACTCCTGACCTCAAGTGATCCACTTGCC...TGCTTGTTCTCTCACCCCTAACCCTAGTAGTTCCTCCACTAACTTTCTCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTAGCCTGGACCATCTCTaGATTGCTCTTTATAGGAAA +
Preference number: 4 (lower is better)
Translates to: PASSEHVCTCSCPTGSNASLDHL*IALYRK
Trigger: TTTCCTATAAAGAGCAATGCAGAGATGGTCCAGGCT...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAAGTAATGAGCCAAGATTaGGCCATTCGTTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKVMSQD*AIRCTP
Trigger: TGGAGTGCAACGAATGGCGCAATCTTGGCTCATTAC...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp CCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCACCCACACGTTCAGTCCCATAGATaGCCTTATAACGTAGGTATT +
Preference number: 4 (lower is better)
Translates to: PLILKDATNCKALVSHPHVQSHR*PYNVGI
Trigger: AATACCTACGTTATAAGGCCATCTATGGGACTGAAC...GTGTGGGTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTTCACTAGGTAACACTTaGGAGGTAGCGTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSSLGNT*EVACCM
Trigger: CATACAGCACGCTACCTCCCAAGTGTTACCTAGTGA...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR TCA 90 bp TCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAACAAAAACTGCTaGGTAAAGGGCAGGTCACAA +
Preference number: 4 (lower is better)
Translates to: SKFSSTLPNLELLGTAAPQNKNC*VKGRSQ
Trigger: TTGTGACCTGCCCTTTACTCAGCAGTTTTTGTTCTG...TGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp AAAGCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCGCTCTCGCTTCTTCTTaGCCTCCAGGTTATTCAGAA +
Preference number: 4 (lower is better)
Translates to: KATSRHSTEIKCSTTYPSALASS*PPGYSE
Trigger: TTCTGAATAACCTGGAGGTCAAGAAGAAGCGAGAGC...GGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAAGTATTTCCACGGCACTaGGCTCTGGAGCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEEVFPRH*ALEQVF
Trigger: GAAGACTTGCTCCAGAGCTCAGTGCCGTGGAAATAC...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCAATAGAAGTCATGTCTaGGATGTCGTACTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFNRSHV*DVVLGV
Trigger: CACCCCAAGTACGACATCTCAGACATGACTTCTATT...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp AAGGGAAGGTTCTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTGTCCCAGCAAGTTCTaGGCATGTTTGTACATGCTC +
Preference number: 4 (lower is better)
Translates to: KGRFSFHQSSPPRYQTWNCPSKF*ACLYML
Trigger: GAGCATGTACAAACATGCTCAGAACTTGCTGGGACA...ATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAGAACCTTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp AATAGCAGCCCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCGGGTTGGGAGCAAAGTaGATAGGACTCTATTACAAT +
Preference number: 4 (lower is better)
Translates to: NSSPLILKDATNCKALVSGLGAK*IGLYYN
Trigger: ATTGTAATAGAGTCCTATTCACTTTGCTCCCAACCC...GGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGGGCTGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp GGGGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATAATCACCATAGAGTATaGAATAGGGAACTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GVREQAAFTQAAICKAKDNHHRV*NRELHL
Trigger: GAGGTGGAGTTCCCTATTGCATACTCTATGGTGATT...ATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp TGTATACAACTAGTCATCAGTCATCTCCGTAGTGGGGTTGGGAGCAAAGTGAATGTTTGTACATGCTCTTaGCCCACAGGTAGCAACGCT +
Preference number: 4 (lower is better)
Translates to: CIQLVISHLRSGVGSKVNVCTCS*PTGSNA
Trigger: AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAAC...ATTCACTTTGCTCCCAACCCCACTACGGAGATGACTGATGACTAGTTGTATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp CTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGAGCATGTTTGTACATaGTCTTGCCCCACAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LFPSKFSSTLPNLELLGTEHVCT*SCPTGS
Trigger: GCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC...CGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp GAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCTCATAGTGTGTACCCAGGCAGCAATTTaGAAGGCAAAAGATCTACTT +
Preference number: 4 (lower is better)
Translates to: EHVCTCSCPTGSNALIVCTQAAI*KAKDLL
Trigger: AAGTAGATCTTTTGCCTTGCAAATTGCTGCCTGGGT...ACACACTATGAGAGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp CCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAACTAGTGATCGATCACCACTaGTGGCAACAGACCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PYHSSSHSHLVRKLVEELVIDHH*WQQTSQ
Trigger: CTGAGAGGTCTGTTGCCAGCAGTGGTGATCGATCAC...TAGTTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTGATCCTTCTTCTTGTTaGTTAGGTGTAATGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PASSEHVCTCSCPTGSNADPSSC*LGVMCL
Trigger: GAGACACATTACACCTAACCAACAAGAAGAAGGATC...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp GGGGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCCAGAGGTGTTCATCTaGGCTATAAGTGTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: GVREQAAFTQAAICKAKDPEVFI*AISVFY
Trigger: GTAAAAGACACTTATAGCCCAGATGAACACCTCTGG...ATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTGTTCAGTCCCATAGATaGCCTTATAACGTAGGTATT +
Preference number: 4 (lower is better)
Translates to: PASSEHVCTCSCPTGSNAVQSHR*PYNVGI
Trigger: AATACCTACGTTATAAGGCCATCTATGGGACTGAAC...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAAGGCAGCTCCACAGAATaGAAAAGCTACCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEEGSSTE*KSYQQA
Trigger: TGCCTGCTGGTAGCTTTTCCATTCTGTGGAGCTGCC...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TTAGTGAGAAAGTTAGTGGAGGAACTACTAGGGTTAGGGGTGAGAGAACAAGCACAGAGTCTCTTCCATTaGACCATCGTCACAGAATGG +
Preference number: 4 (lower is better)
Translates to: LVRKLVEELLGLGVREQAQSLFH*TIVTEW
Trigger: CCATTCTGTGACGATGGTTCAATGGAAGAGACTCTG...TGCTTGTTCTCTCACCCCTAACCCTAGTAGTTCCTCCACTAACTTTCTCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TATTCATGCAGCTTGTCAGGACCATTTCAGAATAATGAGAACTCTCTTGCCAGCACTTCCTTTCAGCCTTaGAGTGCTCACAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: YSCSLSGPFQNNENSLASTSFQP*SAHSLW
Trigger: CCAGAGACTGTGAGCACTTCAAGGCTGAAAGGAAGT...GCTGGCAAGAGAGTTCTCATTATTCTGAAATGGTCCTGACAAGCTGCATGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR TCA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAAGAGGTTGCAGTGAACTaGGATTGCACTACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEEEVAVN*DCTTAV
Trigger: GACTGCAGTAGTGCAATCTCAGTTCACTGCAACCTC...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTGTTGATAGACCTCTTTaGTGGAAGTTTCAGGAAATT +
Preference number: 4 (lower is better)
Translates to: PASSEHVCTCSCPTGSNAVDRPL*WKFQEI
Trigger: AATTTCCTGAAACTTCCAGCAAAGAGGTCTATCAAC...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp TCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCATCTTATCCTAAAGGATaGCACGAATTGCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SKFSSTLPNLELLGTAAPSYPKG*HELQSP
Trigger: AGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGA...TGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTACTTGGGAGGTAGCGTaGTGTATGTGTGTATACATA +
Preference number: 4 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSTWEVA*CMCVYI
Trigger: TATGTATACACACATACAGCACGCTACCTCCCAAGT...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp CTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGAACATCTTGAGAGCCTaGACCATCTCTGCATTGCTC +
Preference number: 4 (lower is better)
Translates to: LFPSKFSSTLPNLELLGTNILRA*TISALL
Trigger: GAGCAATGCAGAGATGGTCCAGGCTCTCAAGATGTT...CGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTTTCTTCAAAACATGTTaGACGAAATCTCGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSFFKTC*TKSREA
Trigger: GGCTTCCCGAGATTTCGTCCAACATGTTTTGAAGAA...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCTTGGGTCAAACTTGTTaGCCAACAGGTGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFLGQTC*PTGDGF
Trigger: AAAACCATCACCTGTTGGCCAACAAGTTTGACCCAA...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp TTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGTCAGCCACCACACCTaGCCAAAAGTAACTACCTTA +
Preference number: 4 (lower is better)
Translates to: FPSKFSSTLPNLELLGTAVSHHT*PKVTTL
Trigger: TAAGGTAGTTACTTTTGGCCAGGTGTGGTGGCTGAC...TGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR CAA 72 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTaGCAAGGCAAAAGATCTACTTACCCACACTCTAAT +
Preference number: 4 (lower is better)
Translates to: GERTSSIHPGSN*QGKRSTYPHSN
Trigger: ATTAGAGTGTGGGTAAGTAGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TTAGTGAGAAAGTTAGTGGAGGAACTACTAGGGTTAGGGGTGAGAGAACAAGCACAGAACAAAAACTGCTaGGTAAAGGGCAGGTCACAA +
Preference number: 4 (lower is better)
Translates to: LVRKLVEELLGLGVREQAQNKNC*VKGRSQ
Trigger: TTGTGACCTGCCCTTTACTCAGCAGTTTTTGTTCTG...TGCTTGTTCTCTCACCCCTAACCCTAGTAGTTCCTCCACTAACTTTCTCACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp CTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGTCTCTTCACAAGGCGTaGTTCTGTTTCCAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: LFPSKFSSTLPNLELLGTSLHKA*FCFQVK
Trigger: CTTCACTTGGAAACAGAATCACGCCTTGTGAAGAGA...CGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TATAAATCACCTTTCCAGGGCATATCGTATGCAGAAGATGAGCTGTACTATATTAGTCTTCCATGCAGTTaGGGTCAGCTTGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: YKSPFQGISYAEDELYYISLPCS*GQLAPW
Trigger: CCAGGGTGCAAGCTGACCTCAACTGCATGGAAGACT...AATATAGTACAGCTCATCTTCTGCATACGATATGCCCTGGAAAGGTGATTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp AAGGGAAGGTTCTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATAGCCTGGACCATCTCTaGATTGCTCTTTATAGGAAA +
Preference number: 4 (lower is better)
Translates to: KGRFSFHQSSPPRYQTWNSLDHL*IALYRK
Trigger: TTTCCTATAAAGAGCAATGCAGAGATGGTCCAGGCT...ATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAGAACCTTCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp AAAGCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTCTTATCCTAAAGGATaGCACGAATTGCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: KATSRHSTEIKCSTTYPSSYPKG*HELQSP
Trigger: AGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGA...GGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp AAGGGAAGGTTCTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATACCCAGGCAGCAATTTaGAAGGCAAAAGATCTACTT +
Preference number: 4 (lower is better)
Translates to: KGRFSFHQSSPPRYQTWNTQAAI*KAKDLL
Trigger: AAGTAGATCTTTTGCCTTGCAAATTGCTGCCTGGGT...ATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAGAACCTTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp TCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGACTGGTTAAATCACCCTaGCTTTTCCTTTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: SSTLPNLELLGTAAPQNGLVKSP*LFLYRK
Trigger: TTTTCTGTAAAGGAAAAGGCAGGGTGATTTAACCAG...TCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp AAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAAGAGTACAGGAAAGGTaGTCAAACTGGTTAAATCAC +
Preference number: 4 (lower is better)
Translates to: KVLLHATKPGIIRNGSSTRVQER*SNWLNH
Trigger: GTGATTTAACCAGTTTGACCACCTTTCCTGTACTCT...TGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp TATAAATCACCTTTCCAGGGCATATCGTATGCAGAAGATGAGCTGTACTATATTATCGATCACCACTGCTaGCAACAGACCTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: YKSPFQGISYAEDELYYIIDHHC*QQTSQG
Trigger: GCCCTGAGAGGTCTGTTGCCAGCAGTGGTGATCGAT...AATATAGTACAGCTCATCTTCTGCATACGATATGCCCTGGAAAGGTGATTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR TCA 90 bp CTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGAGTCACACTTCAACCTaGAAGAAAGTTTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LFPSKFSSTLPNLELLGTSHTST*KKVSEP
Trigger: TGGCTCTGAAACTTTCTTTCAGGTTGAAGTGTGACT...CGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp AAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACATATTCTTCTAAGCACTaGAGAGCATTATCATCTACC +
Preference number: 4 (lower is better)
Translates to: KVLLHATKPGIIRNGSSTYSSKH*RALSST
Trigger: GGTAGATGATAATGCTCTTCAGTGCTTAGAAGAATA...TGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCATCGTATGCAGAAGATaGGCTGTACTATATTCAAAG +
Preference number: 4 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFIVCRR*AVLYSK
Trigger: CTTTGAATATAGTACAGCTCATCTTCTGCATACGAT...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp TCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCGTTGATAGACCTCTTTaGTGGAAGTTTCAGGAAATT +
Preference number: 4 (lower is better)
Translates to: SIKVLLHATKPGIIRNGSVDRPL*WKFQEI
Trigger: AATTTCCTGAAACTTCCAGCAAAGAGGTCTATCAAC...GCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp GGGGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATGATAGACCTCTTTGCTaGAAGTTTCAGGAAATTATA +
Preference number: 4 (lower is better)
Translates to: GVREQAAFTQAAICKAKDDRPLC*KFQEII
Trigger: TATAATTTCCTGAAACTTCCAGCAAAGAGGTCTATC...ATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp TCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCAATTATCATCTACCTTTaGGTCAAACTTGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: SKFSSTLPNLELLGTAAPIIIYL*VKLVGQ
Trigger: TTGGCCAACAAGTTTGACCCAAAGGTAGATGATAAT...TGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR GCA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAAAGGAAATGTGTAATCTaGAGAATCACTAATAGCGAT +
Preference number: 4 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKRKCVI*RITNSD
Trigger: ATCGCTATTAGTGATTCTGCAGATTACACATTTCCT...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp TCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCATTTTATAGTATCCCTTaGCCATCACAGAAGAGTATA +
Preference number: 4 (lower is better)
Translates to: SKFSSTLPNLELLGTAAPFYSIP*PSQKSI
Trigger: TATACTCTTCTGTGATGGGCAAGGGATACTATAAAA...TGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR GCA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAAAGGACTCTATTACAATaGAGGCAAGTTGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEERTLLQ*RQVGSD
Trigger: GTCACTACCAACTTGCCTGCATTGTAATAGAGTCCT...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp CCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAACTATTCTTCAAAACATGTTaGACGAAATCTCGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PYHSSSHSHLVRKLVEELFFKTC*TKSREA
Trigger: GGCTTCCCGAGATTTCGTCCAACATGTTTTGAAGAA...TAGTTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCCATTCAATCAGTTGTTaGGATTTAGGGTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFHSISC*DLGFFK
Trigger: TTTGAAGAACCCTAAATCCCAACAACTGATTGAATG...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp AAGGGAAGGTTCTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATATTATCATCTACCTTTaGGTCAAACTTGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KGRFSFHQSSPPRYQTWNIIIYL*VKLVGQ
Trigger: TTGGCCAACAAGTTTGACCCAAAGGTAGATGATAAT...ATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAGAACCTTCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp ATCACAGAAGAGTATAACTTAGCCAACAACCATCTCTGGAGCTTCGGAAAGGAAGAAAGGTGGTCAAACTaGTTAAATCACCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ITEEYNLANNHLWSFGKEERWSN*LNHPAF
Trigger: AAAGGCAGGGTGATTTAACCAGTTTGACCACCTTTC...TTCCTTTCCGAAGCTCCAGAGATGGTTGTTGGCTAAGTTATACTCTTCTGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCTCACATGAAAGCTTTTaGAGTAAGTTAACTATGAGG +
Preference number: 4 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFSHESF*SKLTMR
Trigger: CCTCATAGTTAACTTACTCCAAAAGCTTTCATGTGA...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR TCA 90 bp TTAGTGAGAAAGTTAGTGGAGGAACTACTAGGGTTAGGGGTGAGAGAACAAGCATATTCTTCTAAGCACTaGAGAGCATTATCATCTACC +
Preference number: 4 (lower is better)
Translates to: LVRKLVEELLGLGVREQAYSSKH*RALSST
Trigger: GGTAGATGATAATGCTCTTCAGTGCTTAGAAGAATA...TGCTTGTTCTCTCACCCCTAACCCTAGTAGTTCCTCCACTAACTTTCTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TATAAATCACCTTTCCAGGGCATATCGTATGCAGAAGATGAGCTGTACTATATTCAGCAGGCATTCAACTaGAATCAAGTGCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: YKSPFQGISYAEDELYYIQQAFN*NQVLYH
Trigger: GTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTG...AATATAGTACAGCTCATCTTCTGCATACGATATGCCCTGGAAAGGTGATTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp AAAGCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCCATTCAATCAGTTGTTaGGATTTAGGGTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: KATSRHSTEIKCSTTYPSHSISC*DLGFFK
Trigger: TTTGAAGAACCCTAAATCCCAACAACTGATTGAATG...GGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CCA 90 bp AAGGGAAGGTTCTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATATTACCTTACCTGATTaGCTATTATCTCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: KGRFSFHQSSPPRYQTWNITLPD*LLSPLW
Trigger: CCATAAAGGAGATAATAGCCAATCAGGTAAGGTAAT...ATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAGAACCTTCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CCA 90 bp TTAGTGAGAAAGTTAGTGGAGGAACTACTAGGGTTAGGGGTGAGAGAACAAGCAGATAGACCTCTTTGCTaGAAGTTTCAGGAAATTATA +
Preference number: 4 (lower is better)
Translates to: LVRKLVEELLGLGVREQADRPLC*KFQEII
Trigger: TATAATTTCCTGAAACTTCCAGCAAAGAGGTCTATC...TGCTTGTTCTCTCACCCCTAACCCTAGTAGTTCCTCCACTAACTTTCTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR TCA 90 bp TATAAATCACCTTTCCAGGGCATATCGTATGCAGAAGATGAGCTGTACTATATTAGTCACACTTCAACCTaGAAGAAAGTTTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: YKSPFQGISYAEDELYYISHTST*KKVSEP
Trigger: TGGCTCTGAAACTTTCTTTCAGGTTGAAGTGTGACT...AATATAGTACAGCTCATCTTCTGCATACGATATGCCCTGGAAAGGTGATTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
3UTR CAA 72 bp ATTAATGGGAGCATCCTTCAGATTACACCAATTAACTaGCATATAAATCACCTTTCCAGGGCATATCGTATG +
Preference number: 4 (lower is better)
Translates to: INGSILQITPIN*HINHLSRAYRM
Trigger: CATACGATATGCCCTGGAAAGGTGATTTATATGCAAGTTAATTGGTGTAATCTGAAGGATGCTCCCATTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR TCA 90 bp TATAAATCACCTTTCCAGGGCATATCGTATGCAGAAGATGAGCTGTACTATATTACACATTACCTTACCTaGTTGGCTATTATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: YKSPFQGISYAEDELYYITHYLT*LAIISF
Trigger: AAAGGAGATAATAGCCAATCAGGTAAGGTAATGTGT...AATATAGTACAGCTCATCTTCTGCATACGATATGCCCTGGAAAGGTGATTTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CAA 90 bp CAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTGCCCCTTCTACCTCCTTGCCAGGCGTCAGCTaGGTCTTCTCATTGACAGGA +
Preference number: 5 (lower is better)
Translates to: QGGFSAYFPRWPCAPSTSLPGVS*VFSLTG
Trigger: TCCTGTCAATGAGAAGACCAAGCTGACGCCTGGCAA...GGAGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS GCA 90 bp GATGTCGTACTTGGGGTGGTTGGGAACAGAGCCAGGCATCCACCGTaGACGCTGAAGGGTGGCCCAGAGGTGTTCATCTGGGCTATAAGT +
Preference number: 5 (lower is better)
Translates to: DVVLGVVGNRARHPP*TLKGGPEVFIWAIS
Trigger: ACTTATAGCCCAGATGAACACCTCTGGGCCACCCTTCAGCGTGCACGGTGGATGCCTGGCTCTGTTCCCAACCACCCCAAGTACGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCACCCACACAGGTGGGAGTATCGCTaGAACCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: PLILKDATNCKALVSHPHRWEYR*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGCGATACTCCCACCT...GTGTGGGTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS CCA 90 bp GGTGGTTGGGAACAGAGCCAGGCATCCACCGTGCACGCTGAAGGGTaGCCCAGAGGTGTTCATCTGGGCTATAAGTGTCTTTTACCCATT +
Preference number: 5 (lower is better)
Translates to: GGWEQSQASTVHAEG*PRGVHLGYKCLLPI
Trigger: AATGGGTAAAAGACACTTATAGCCCAGATGAACACCTCTGGGCCACCCTTCAGCGTGCACGGTGGATGCCTGGCTCTGTTCCCAACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CCA 90 bp GCAGAGTCTCTTCCATTGAACCATCGTCACAGAATGGGAGACAGGTaGAGACCGAGCACAGGGAAGGTGGAGGAGGACACAATCCTGGAC +
Preference number: 5 (lower is better)
Translates to: AESLPLNHRHRMGDR*RPSTGKVEEDTILD
Trigger: GTCCAGGATTGTGTCCTCCTCCACCTTCCCTGTGCTCGGTCTCCACCTGTCTCCCATTCTGTGACGATGGTTCAATGGAAGAGACTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559200.1
CDS-3UTR CAA 90 bp CCCAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTGCCCCTTCTACCTTTTACACATACCTTATaGTCTCCCCGCAAGGAAATG +
Preference number: 5 (lower is better)
Translates to: PREAFLPTSHGGRVPLLPFTHTL*SPRKEM
Trigger: CATTTCCTTGCGGGGAGACAATAAGGTATGTGTAAA...AGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS TCA 90 bp AAAGGCTCTCGCTTCTTCTTGACCTCCAGGTTATTCAGAATAGCCTaGAGCACTGCCTCTTGGTCCCCTCGGGTGACCCCTGAACAGTTG +
Preference number: 5 (lower is better)
Translates to: KGSRFFLTSRLFRIA*STASWSPRVTPEQL
Trigger: CAACTGTTCAGGGGTCACCCGAGGGGACCAAGAGGCAGTGCTTCAGGCTATTCTGAATAACCTGGAGGTCAAGAAGAAGCGAGAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396065.3
ENST00000559200.1
ENST00000560585.5
CDS GCA 90 bp GAAGCAAACAGGAAGTCCCTCCTCCAGCCGGCTGTCTCCCTCCAGTaGCCTTTATTGGCAGAGTTTAAGCAGAAACGTGGTTTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: EANRKSLLQPAVSLQ*PLLAEFKQKRGLQE
Trigger: CTCTTGCAAACCACGTTTCTGCTTAAACTCTGCCAATAAAGGGCACTGGAGGGAGACAGCCGGCTGGAGGAGGGACTTCCTGTTTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560580.5
CDS-3UTR CAA 90 bp CCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCACCCACACCCTACAGTACTGGCTTaGAGATTCCCTGGACTCCAG +
Preference number: 5 (lower is better)
Translates to: PLILKDATNCKALVSHPHPTVLA*RFPGLQ
Trigger: CTGGAGTCCAGGGAATCTCAAAGCCAGTACTGTAGG...GTGTGGGTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CCCAGGGAGGCTTTTCTGCCTACTTCCCACGGTGGCCGTGTGCCCCTTCTACCTTACCCATTCAATCAGTaGTTGGGATTTAGGGTTCTT +
Preference number: 5 (lower is better)
Translates to: PREAFLPTSHGGRVPLLPYPFNQ*LGFRVL
Trigger: AAGAACCCTAAATCCCAACAACTGATTGAATGGGTA...AGGTAGAAGGGGCACACGGCCACCGTGGGAAGTAGGCAGAAAAGCCTCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CAA 90 bp CCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCACCCACACCTCCCATTCAACATCTaGAGAGCCTGGACCATCTCT +
Preference number: 5 (lower is better)
Translates to: PLILKDATNCKALVSHPHLPFNI*RAWTIS
Trigger: AGAGATGGTCCAGGCTCTCAAGATGTTGAATGGGAG...GTGTGGGTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp GAGGAGGACCAAGGACCATCACATCAGCCAGCAGGGGGAGGCCGTGATCGATCACCATTCAATCAGTTGTaGGGATTTAGGGTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: EEDQGPSHQPAGGGRDRSPFNQL*GFRVLQ
Trigger: TTGAAGAACCCTAAATCCCAACAACTGATTGAATGG...TGATCGATCACGGCCTCCCCCTGCTGGCTGATGTGATGGTCCTTGGTCCTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS TCA 90 bp ATTCCCTGGACTCCAGACCCAAGTGGTCAGAGTCACACTTCAACCTaGAAGAAAGTTTCAGAGCCACAGTGGCCAGCAGCATATAGCAGC +
Preference number: 5 (lower is better)
Translates to: IPWTPDPSGQSHTST*KKVSEPQWPAAYSS
Trigger: GCTGCTATATGCTGCTGGCCACTGTGGCTCTGAAACTTTCTTTCAGGTTGAAGTGTGACTCTGACCACTTGGGTCTGGAGTCCAGGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396065.3
ENST00000559189.5
ENST00000559200.1
ENST00000559626.1
ENST00000560585.5
CDS-3UTR CAA 90 bp GAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCTCATAGTGTGTAAAGGATGCCACGAATaGCAAAGCCCTGGTCTCCCA +
Preference number: 5 (lower is better)
Translates to: EHVCTCSCPTGSNALIVCKGCHE*QSPGLP
Trigger: TGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTT...ACACACTATGAGAGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGATGGGGATTCACCATGTaGGCCAGGCTGATCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SSTLPNLELLGTAAPQNGWGFTM*ARLILN
Trigger: GTTCAAGATCAGCCTGGCCAACATGGTGAATCCCCA...TCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS TCA 90 bp CACAAGAACTTGCAGACGGTAGTGTCGAAGCAAAGAGTCAAACTCTaGGATGTTTTGCAGCCCCAGCCCTTGAGAGGCACCATCCAGATT +
Preference number: 5 (lower is better)
Translates to: HKNLQTVVSKQRVKL*DVLQPQPLRGTIQI
Trigger: AATCTGGATGGTGCCTCTCAAGGGCTGGGGCTGCAAAACATCTCAGAGTTTGACTCTTTGCTTCGACACTACCGTCTGCAAGTTCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560111.5
ENST00000560580.5
CDS GCA 90 bp ACCCACACTGTCCCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTaGCCCACAGGTAGCAACGCTCTCATAGTGTGTCTCAAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: THTVPASSEHVCTCS*PTGSNALIVCLKVQ
Trigger: CTGAACTTTGAGACACACTATGAGAGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGGGACAGTGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CCA 90 bp TCAAGCCCAAGTCATTCAGGGAGGTCAGTGAGGCAGGAAGAATGCTaGCAATATCCGACAAGGCAAACAGATATTTCAGCCAGAACAGCC +
Preference number: 5 (lower is better)
Translates to: SSPSHSGRSVRQEEC*QYPTRQTDISARTA
Trigger: GGCTGTTCTGGCTGAAATATCTGTTTGCCTTGTCGGATATTGCCAGCATTCTTCCTGCCTCACTGACCTCCCTGAATGACTTGGGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559626.1
CDS-3UTR CAA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTCCTACAGTACTGGCTTaGAGATTCCCTGGACTCCAG +
Preference number: 5 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSPTVLA*RFPGLQ
Trigger: CTGGAGTCCAGGGAATCTCAAAGCCAGTACTGTAGG...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAGTGACCCCTGAACAGTaGATAGACCTCTTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: SSTLPNLELLGTAAPQNGVTPEQ*IDLFAG
Trigger: TCCAGCAAAGAGGTCTATCAACTGTTCAGGGGTCAC...TCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAGCTTTGACCGCCTCTTaGAAAGTTTCTGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: SSTLPNLELLGTAAPQNGALTAS*KVSGDF
Trigger: GAAGTCCCCAGAAACTTTCAAAGAGGCGGTCAAAGC...TCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCATCTGAGATGTCGTACTaGGGGTGGTTGGGAACAGAG +
Preference number: 5 (lower is better)
Translates to: SKFSSTLPNLELLGTAAPSEMSY*GWLGTE
Trigger: CTCTGTTCCCAACCACCCCAAGTACGACATCTCAGA...TGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTTTGACAGGAAGCTCCTaGAGGTCATGTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: PASSEHVCTCSCPTGSNALTGSS*RSCSSS
Trigger: AGATGAAGAACATGACCTCAAGGAGCTTCCTGTCAA...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCGTGACCCCTGAACAGTaGATAGACCTCTTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFVTPEQ*IDLFAG
Trigger: TCCAGCAAAGAGGTCTATCAACTGTTCAGGGGTCAC...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp ACACTGTCCCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAAACTCCACCTCTTCTTaGCTCAGTGGGAACTGTATG +
Preference number: 5 (lower is better)
Translates to: TLSQQVLSMFVHALAPQVNSTSS*LSGNCM
Trigger: CATACAGTTCCCACTGAGCAAAGAAGAGGTGGAGTT...TACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGGGACAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAATTCCAGCGGGTTTCTTaGTGCTTAGGAGGTACCTCT +
Preference number: 5 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKFQRVS*CLGGTS
Trigger: AGAGGTACCTCCTAAGCACAAAGAAACCCGCTGGAA...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTGTTCTTCAAAACATGTaGGACGAAATCTCGGGAAGC +
Preference number: 5 (lower is better)
Translates to: PASSEHVCTCSCPTGSNAVLQNM*DEISGS
Trigger: GCTTCCCGAGATTTCGTCCAACATGTTTTGAAGAAC...AGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGAGATTGCGCCATTCGTaGCACTCCAACCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: LFPSKFSSTLPNLELLGTRLRHS*HSNLGD
Trigger: GTCACCCAGGTTGGAGTGCAACGAATGGCGCAATCT...CGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CAA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAAGGCAGGAAGAATGCTTaGCCAGGCGTCAGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEEGRKNA*PGVSLV
Trigger: GACCAAGCTGACGCCTGGCAAAGCATTCTTCCTGCC...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560585.5
CDS TCA 90 bp TCTAATCAGGGTTGCAAAGTGAAGCTCAGACTGGATGCAATTTGCTaGAAGACAGGGACAGCCTGTAGGTTCCTCCTTAGAGCTCCACAT +
Preference number: 5 (lower is better)
Translates to: SNQGCKVKLRLDAIC*KTGTACRFLLRAPH
Trigger: ATGTGGAGCTCTAAGGAGGAACCTACAGGCTGTCCCTGTCTTTCAGCAAATTGCATCCAGTCTGAGCTTCACTTTGCAACCCTGATTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560111.5
CDS CCA 90 bp ACCTCTGACTCCATGCTATTCCTCCCATTCAACATCTTGAGAGCCTaGACCATCTCTGCATTGCTCTTTATAGGAAAGTCCGTCCCACAT +
Preference number: 5 (lower is better)
Translates to: TSDSMLFLPFNILRA*TISALLFIGKSVPH
Trigger: ATGTGGGACGGACTTTCCTATAAAGAGCAATGCAGAGATGGTCCAGGCTCTCAAGATGTTGAATGGGAGGAATAGCATGGAGTCAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CCA 90 bp AGTTTCAGGCTCCTCTTTAATATCTGCAAAGTAGAGGGCAGCAGGTaGCTCCATCACTCTCCTTTTGACTTCCTGCTCTCAGGTAAGACA +
Preference number: 5 (lower is better)
Translates to: SFRLLFNICKVEGSR*LHHSPFDFLLSGKT
Trigger: TGTCTTACCTGAGAGCAGGAAGTCAAAAGGAGAGTGATGGAGCCACCTGCTGCCCTCTACTTTGCAGATATTAAAGAGGAGCCTGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559626.1
ENST00000560210.1
ENST00000560585.5
CDS-3UTR CAA 90 bp TTAGTGAGAAAGTTAGTGGAGGAACTACTAGGGTTAGGGGTGAGAGAACAAGCATTGCCAGGCGTCAGCTaGGTCTTCTCATTGACAGGA +
Preference number: 5 (lower is better)
Translates to: LVRKLVEELLGLGVREQALPGVS*VFSLTG
Trigger: TCCTGTCAATGAGAAGACCAAGCTGACGCCTGGCAA...TGCTTGTTCTCTCACCCCTAACCCTAGTAGTTCCTCCACTAACTTTCTCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTGCAGAGTCTCTTCCATaGAACCATCGTCACAGAATG +
Preference number: 5 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSAESLP*NHRHRM
Trigger: CATTCTGTGACGATGGTTCAATGGAAGAGACTCTGC...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCAACTTCCTTTCAGCCTaGAAGTGCTCACAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SIKVLLHATKPGIIRNGSNFLSA*KCSQSL
Trigger: CAGAGACTGTGAGCACTTCAAGGCTGAAAGGAAGTT...GCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCAAACTTCCTTTCAGCCTaGAAGTGCTCACAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SKFSSTLPNLELLGTAAPNFLSA*KCSQSL
Trigger: CAGAGACTGTGAGCACTTCAAGGCTGAAAGGAAGTT...TGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCAAACTCCACCTCTTCTTaGCTCAGTGGGAACTGTATG +
Preference number: 5 (lower is better)
Translates to: SKFSSTLPNLELLGTAAPNSTSS*LSGNCM
Trigger: CATACAGTTCCCACTGAGCAAAGAAGAGGTGGAGTT...TGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp ACACTGTCCCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGGAGGATCCTTCTTCTaGTTGGTTAGGTGTAATGTG +
Preference number: 5 (lower is better)
Translates to: TLSQQVLSMFVHALAPQVGGSFF*LVRCNV
Trigger: CACATTACACCTAACCAACAAGAAGAAGGATCCTCC...TACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGGGACAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAACACCCAGGCAGCAATTaGCAAGGCAAAAGATCTACT +
Preference number: 5 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKHPGSN*QGKRST
Trigger: AGTAGATCTTTTGCCTTGCAAATTGCTGCCTGGGTG...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCCACCCAGGCAGCAATTaGCAAGGCAAAAGATCTACT +
Preference number: 5 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFHPGSN*QGKRST
Trigger: AGTAGATCTTTTGCCTTGCAAATTGCTGCCTGGGTG...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCATGCAGTGAACTGAGATaGCACTACTGCAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: FPSKFSSTLPNLELLGTACSELR*HYCSPA
Trigger: GGCTGGACTGCAGTAGTGCAATCTCAGTTCACTGCA...TGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CAA 90 bp AATAGCAGCCCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCTCTGAAATAAGAGTTTaGACTCAAGAGGGGACCAGG +
Preference number: 5 (lower is better)
Translates to: NSSPLILKDATNCKALVSSEIRV*TQEGTR
Trigger: CCTGGTCCCCTCTTGAGTCAAAACTCTTATTTCAGA...GGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGGGCTGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS TCA 90 bp AAAGTGATATTTCCAGCGGGTTTCTTTGTGCTTAGGAGGTACCTCTaGCTCCATGCTATTCCTCCCATTCAACATCTTGAGAGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: KVIFPAGFFVLRRYL*LHAIPPIQHLESLD
Trigger: GTCCAGGCTCTCAAGATGTTGAATGGGAGGAATAGCATGGAGTCAGAGGTACCTCCTAAGCACAAAGAAACCCGCTGGAAATATCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CCTCTTATCCTAAAGGATGCCACGAATTGCAAAGCCCTGGTCTCCCACCCACACCAAGAAATAATTGCTTaGACCGCCTCTTTGAAAGTT +
Preference number: 5 (lower is better)
Translates to: PLILKDATNCKALVSHPHQEIIA*TASLKV
Trigger: AACTTTCAAAGAGGCGGTCAAAGCAATTATTTCTTG...GTGTGGGTGGGAGACCAGGGCTTTGCAATTCGTGGCATCCTTTAGGATAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTGGACCATCTCTGCATaGCTCTTTATAGGAAAGTCC +
Preference number: 5 (lower is better)
Translates to: SIKVLLHATKPGIIRNGSWTISA*LFIGKS
Trigger: GGACTTTCCTATAAAGAGCAATGCAGAGATGGTCCA...GCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TGTATACAACTAGTCATCAGTCATCTCCGTAGTGGGGTTGGGAGCAAAGTGAATCTCCCATTCAACATCTaGAGAGCCTGGACCATCTCT +
Preference number: 5 (lower is better)
Translates to: CIQLVISHLRSGVGSKVNLPFNI*RAWTIS
Trigger: AGAGATGGTCCAGGCTCTCAAGATGTTGAATGGGAG...ATTCACTTTGCTCCCAACCCCACTACGGAGATGACTGATGACTAGTTGTATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CAA 90 bp CTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGTTCCAGCGGGTTTCTTaGTGCTTAGGAGGTACCTCT +
Preference number: 5 (lower is better)
Translates to: LFPSKFSSTLPNLELLGTFQRVS*CLGGTS
Trigger: AGAGGTACCTCCTAAGCACAAAGAAACCCGCTGGAA...CGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp GAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCTCATAGTGTGTGGATCCTTCTTCTTGTaGGTTAGGTGTAATGTGTCT +
Preference number: 5 (lower is better)
Translates to: EHVCTCSCPTGSNALIVCGSFFL*VRCNVS
Trigger: AGACACATTACACCTAACCAACAAGAAGAAGGATCC...ACACACTATGAGAGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAAGGAGGATCCTTCTTCTaGTTGGTTAGGTGTAATGTG +
Preference number: 5 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKGGSFF*LVRCNV
Trigger: CACATTACACCTAACCAACAAGAAGAAGGATCCTCC...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAATCTGAGATGTCGTACTaGGGGTGGTTGGGAACAGAG +
Preference number: 5 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEESEMSY*GWLGTE
Trigger: CTCTGTTCCCAACCACCCCAAGTACGACATCTCAGA...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp GAGCATGTTTGTACATGCTCTTGCCCCACAGGTAGCAACGCTCTCATAGTGTGTCATTATCATCTACCTTaGGGTCAAACTTGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: EHVCTCSCPTGSNALIVCHYHLP*GQTCWP
Trigger: TGGCCAACAAGTTTGACCCAAAGGTAGATGATAATG...ACACACTATGAGAGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TATTCATGCAGCTTGTCAGGACCATTTCAGAATAATGAGAACTCTCTTGCCAGCGGCTCTCGCTTCTTCTaGACCTCCAGGTTATTCAGA +
Preference number: 5 (lower is better)
Translates to: YSCSLSGPFQNNENSLASGSRFF*TSRLFR
Trigger: TCTGAATAACCTGGAGGTCAAGAAGAAGCGAGAGCC...GCTGGCAAGAGAGTTCTCATTATTCTGAAATGGTCCTGACAAGCTGCATGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CAA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAAGGCTCTCGCTTCTTCTaGACCTCCAGGTTATTCAGA +
Preference number: 5 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEEGSRFF*TSRLFR
Trigger: TCTGAATAACCTGGAGGTCAAGAAGAAGCGAGAGCC...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAAGCTTTGACCGCCTCTTaGAAAGTTTCTGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEEALTAS*KVSGDF
Trigger: GAAGTCCCCAGAAACTTTCAAAGAGGCGGTCAAAGC...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp AAGGGAAGGTTCTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTGGACCATCTCTGCATaGCTCTTTATAGGAAAGTCC +
Preference number: 5 (lower is better)
Translates to: KGRFSFHQSSPPRYQTWNWTISA*LFIGKS
Trigger: GGACTTTCCTATAAAGAGCAATGCAGAGATGGTCCA...ATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAGAACCTTCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp AAAGCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCGTTCTTCAAAACATGTaGGACGAAATCTCGGGAAGC +
Preference number: 5 (lower is better)
Translates to: KATSRHSTEIKCSTTYPSVLQNM*DEISGS
Trigger: GCTTCCCGAGATTTCGTCCAACATGTTTTGAAGAAC...GGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTCAACAGGTGATGGTTTaGAAGCATCCAATTCAAGTC +
Preference number: 5 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSQQVMV*KHPIQV
Trigger: GACTTGAATTGGATGCTTCAAAACCATCACCTGTTG...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAATACAATGCAGGCAAGTaGGTAGTGACAATGACCATT +
Preference number: 5 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKYNAGK*VVTMTI
Trigger: AATGGTCATTGTCACTACCAACTTGCCTGCATTGTA...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CAA 90 bp CTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGTCCATCACTCTCCTTTaGACTTCCTGCTCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: LFPSKFSSTLPNLELLGTSITLL*TSCSQV
Trigger: TACCTGAGAGCAGGAAGTCAAAAGGAGAGTGATGGA...CGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560585.5
CDS CCA 90 bp CTAAGCACTGAAGAGCATTATCATCTACCTTTGGGTCAAACTTGTTaGCCAACAGGTGATGGTTTTGAAGCATCCAATTCAAGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: LSTEEHYHLPLGQTC*PTGDGFEASNSSPQ
Trigger: CTGGGGACTTGAATTGGATGCTTCAAAACCATCACCTGTTGGCCAACAAGTTTGACCCAAAGGTAGATGATAATGCTCTTCAGTGCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TCTCCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAATCCTCTTTAATATCTTaGCCAGGCGTCAGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: SPYHSSSHSHLVRKLVEESSLIS*PGVSLV
Trigger: GACCAAGCTGACGCCTGGCAAAGATATTAAAGAGGA...TTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CAA 90 bp ATCACAGAAGAGTATAACTTAGCCAACAACCATCTCTGGAGCTTCGGAAAGGAAGCAGAGTCTCTTCCATaGAACCATCGTCACAGAATG +
Preference number: 5 (lower is better)
Translates to: ITEEYNLANNHLWSFGKEAESLP*NHRHRM
Trigger: CATTCTGTGACGATGGTTCAATGGAAGAGACTCTGC...TTCCTTTCCGAAGCTCCAGAGATGGTTGTTGGCTAAGTTATACTCTTCTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS-3UTR CAA 90 bp GCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCTTCCCATTCAATCAGTTGTaGGGATTTAGGGTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: ATSRHSTEIKCSTTYPSFPFNQL*GFRVLQ
Trigger: TTGAAGAACCCTAAATCCCAACAACTGATTGAATGG...GAAGGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp GGTGAGAGAACAAGCAGCATTCACCCAGGCAGCAATTTGCAAGGCAAAAGATCTTACCCATTCAATCAGTaGTTGGGATTTAGGGTTCTT +
Preference number: 5 (lower is better)
Translates to: GERTSSIHPGSNLQGKRSYPFNQ*LGFRVL
Trigger: AAGAACCCTAAATCCCAACAACTGATTGAATGGGTA...AGATCTTTTGCCTTGCAAATTGCTGCCTGGGTGAATGCTGCTTGTTCTCTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp AAAGCTACCAGCAGGCATTCAACTGAAATCAAGTGCTCTACCACATATCCCTCCCAACAGGTGATGGTTTaGAAGCATCCAATTCAAGTC +
Preference number: 5 (lower is better)
Translates to: KATSRHSTEIKCSTTYPSQQVMV*KHPIQV
Trigger: GACTTGAATTGGATGCTTCAAAACCATCACCTGTTG...GGAGGGATATGTGGTAGAGCACTTGATTTCAGTTGAATGCCTGCTGGTAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CTCTTTCCATCAAAGTTCTCCTCCACGCTACCAAACCTGGAATTATTAGGAACGATAATGAGAACTCTCTaGCCAGCCCCTAGGGATTTT +
Preference number: 5 (lower is better)
Translates to: LFPSKFSSTLPNLELLGTIMRTL*PAPRDF
Trigger: AAAATCCCTAGGGGCTGGCAAGAGAGTTCTCATTAT...CGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAGGAGAACTTTGATGGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS TCA 90 bp TTCTTCTTGTTGGTTAGGTGTAATGTGTCTCTCACTACCTCAAAGTaGTATTTCCAGCGGGTTTCTTTGTGCTTAGGAGGTACCTCTGAC +
Preference number: 5 (lower is better)
Translates to: FFLLVRCNVSLTTSK*YFQRVSLCLGGTSD
Trigger: GTCAGAGGTACCTCCTAAGCACAAAGAAACCCGCTGGAAATATCACTTTGAGGTAGTGAGAGACACATTACACCTAACCAACAAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CCA 90 bp ACCCATTCAATCAGTTGTTGGGATTTAGGGTTCTTCAAAACATGTTaGACGAAATCTCGGGAAGCCACAATGTACGCATTCCCTGTAAAC +
Preference number: 5 (lower is better)
Translates to: THSISCWDLGFFKTC*TKSREATMYAFPVN
Trigger: GTTTACAGGGAATGCGTACATTGTGGCTTCCCGAGATTTCGTCCAACATGTTTTGAAGAACCCTAAATCCCAACAACTGATTGAATGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAACTATTGACAGGAAGCTCCTaGAGGTCATGTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: PYHSSSHSHLVRKLVEELLTGSS*RSCSSS
Trigger: AGATGAAGAACATGACCTCAAGGAGCTTCCTGTCAA...TAGTTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CTCCACGCTACCAAACCTGGAATTATTAGGAACGGCAGCTCCACAGAATGGAAACAAGAAATAATTGCTTaGACCGCCTCTTTGAAAGTT +
Preference number: 5 (lower is better)
Translates to: LHATKPGIIRNGSSTEWKQEIIA*TASLKV
Trigger: AACTTTCAAAGAGGCGGTCAAAGCAATTATTTCTTG...TTTCCATTCTGTGGAGCTGCCGTTCCTAATAATTCCAGGTTTGGTAGCGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp TGTATACAACTAGTCATCAGTCATCTCCGTAGTGGGGTTGGGAGCAAAGTGAATCATTATCATCTACCTTaGGGTCAAACTTGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: CIQLVISHLRSGVGSKVNHYHLP*GQTCWP
Trigger: TGGCCAACAAGTTTGACCCAAAGGTAGATGATAATG...ATTCACTTTGCTCCCAACCCCACTACGGAGATGACTGATGACTAGTTGTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS CCA 90 bp GGTAGCAACGCTCTCATAGTGTGTCTCAAAGTTCAGTCCCATAGATaGCCTTATAACGTAGGTATTCTTCTAAGCACTGAAGAGCATTAT +
Preference number: 5 (lower is better)
Translates to: GSNALIVCLKVQSHR*PYNVGILLSTEEHY
Trigger: ATAATGCTCTTCAGTGCTTAGAAGAATACCTACGTTATAAGGCCATCTATGGGACTGAACTTTGAGACACACTATGAGAGCGTTGCTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp CCCTATCACAGCAGTTCTCATTCTCACTTAGTGAGAAAGTTAGTGGAGGAACTAGGATCCTTCTTCTTGTaGGTTAGGTGTAATGTGTCT +
Preference number: 5 (lower is better)
Translates to: PYHSSSHSHLVRKLVEELGSFFL*VRCNVS
Trigger: AGACACATTACACCTAACCAACAAGAAGAAGGATCC...TAGTTCCTCCACTAACTTTCTCACTAAGTGAGAATGAGAACTGCTGTGATAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS-3UTR CAA 90 bp GTATTTACACATACCTTATTGTCTCCCCGCAAGGAAATGTGTAATCTGCAGAATTGCTATTCATGCAGCTaGTCAGGACCATTTCAGAAT +
Preference number: 5 (lower is better)
Translates to: VFTHTLLSPRKEMCNLQNCYSCS*SGPFQN
Trigger: ATTCTGAAATGGTCCTGACAAGCTGCATGAATAGCA...ATTCTGCAGATTACACATTTCCTTGCGGGGAGACAATAAGGTATGTGTAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396065.3
CDS GCA 72 bp CTTGGGGTGGTTGGGAACAGAGCCAGGCATCCACCGTaGACGCTGAAGGGTGGCCCAGAGGTGTTCATCTGG +
Preference number: 6 (lower is better)
Translates to: LGVVGNRARHPP*TLKGGPEVFIW
Trigger: CCAGATGAACACCTCTGGGCCACCCTTCAGCGTGCACGGTGGATGCCTGGCTCTGTTCCCAACCACCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CCA 72 bp GAACAGAGCCAGGCATCCACCGTGCACGCTGAAGGGTaGCCCAGAGGTGTTCATCTGGGCTATAAGTGTCTT +
Preference number: 6 (lower is better)
Translates to: EQSQASTVHAEG*PRGVHLGYKCL
Trigger: AAGACACTTATAGCCCAGATGAACACCTCTGGGCCACCCTTCAGCGTGCACGGTGGATGCCTGGCTCTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CAA 90 bp GCAGCCCAGAGCCCACAAGTAATGCAGCTGGCAGAGTCTCTTCCATaGAACCATCGTCACAGAATGGGAGACAGGTGGAGACCGAGCACA +
Preference number: 6 (lower is better)
Translates to: AAQSPQVMQLAESLP*NHRHRMGDRWRPST
Trigger: TGTGCTCGGTCTCCACCTGTCTCCCATTCTGTGACGATGGTTCAATGGAAGAGACTCTGCCAGCTGCATTACTTGTGGGCTCTGGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396065.3
ENST00000559189.5
ENST00000559200.1
ENST00000559626.1
ENST00000560585.5
CDS TCA 72 bp ACGGCACTGAGCTCTGGAGCAAGTCTTCCATGCAGTTaGGGTCAGCTTGCACCCTGGACCAGGAGGCATAAA +
Preference number: 6 (lower is better)
Translates to: TALSSGASLPCS*GQLAPWTRRHK
Trigger: TTTATGCCTCCTGGTCCAGGGTGCAAGCTGACCTCAACTGCATGGAAGACTTGCTCCAGAGCTCAGTGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS GCA 72 bp GAGCTCCACATCCTCTCTGCACTCAAAGTTCCCCCTTaGTCTAGACAGCCCTCCTGGATGCACTTCACATGG +
Preference number: 6 (lower is better)
Translates to: ELHILSALKVPP*SRQPSWMHFTW
Trigger: CCATGTGAAGTGCATCCAGGAGGGCTGTCTAGAGCAAGGGGGAACTTTGAGTGCAGAGAGGATGTGGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560111.5
CDS CCA 72 bp CTTCCATTGAACCATCGTCACAGAATGGGAGACAGGTaGAGACCGAGCACAGGGAAGGTGGAGGAGGACACA +
Preference number: 6 (lower is better)
Translates to: LPLNHRHRMGDR*RPSTGKVEEDT
Trigger: TGTGTCCTCCTCCACCTTCCCTGTGCTCGGTCTCCACCTGTCTCCCATTCTGTGACGATGGTTCAATGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396065.3
ENST00000559189.5
ENST00000559200.1
ENST00000559626.1
ENST00000560585.5
CDS CCA 72 bp GCAATAGAAGTCATGTCTGAGATGTCGTACTTGGGGTaGTTGGGAACAGAGCCAGGCATCCACCGTGCACGC +
Preference number: 6 (lower is better)
Translates to: AIEVMSEMSYLG*LGTEPGIHRAR
Trigger: GCGTGCACGGTGGATGCCTGGCTCTGTTCCCAACCACCCCAAGTACGACATCTCAGACATGACTTCTATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS TCA 72 bp CTGAAGCACTGCCTCTTGGTCCCCTCGGGTGACCCCTaGACAGTTGATAGACCTCTTTGCTGGAAGTTTCAG +
Preference number: 6 (lower is better)
Translates to: LKHCLLVPSGDP*TVDRPLCWKFQ
Trigger: CTGAAACTTCCAGCAAAGAGGTCTATCAACTGTTCAGGGGTCACCCGAGGGGACCAAGAGGCAGTGCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396065.3
ENST00000559189.5
ENST00000559200.1
ENST00000560585.5
CDS CCA 72 bp CCGGCAATGGTTCCTGCAGCAAGAAGACATAAACTGTaGGAAGCTTGGGTTCCGGGAAGACATCCTGGAGGA +
Preference number: 6 (lower is better)
Translates to: PAMVPAARRHKL*EAWVPGRHPGG
Trigger: TCCTCCAGGATGTCTTCCCGGAACCCAAGCTTCCCACAGTTTATGTCTTCTTGCTGCAGGAACCATTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560874.5
CDS CCA 72 bp TCCTCCAGCCGGCTGTCTCCCTCCAGTGCCCTTTATTaGCAGAGTTTAAGCAGAAACGTGGTTTGCAAGAGG +
Preference number: 6 (lower is better)
Translates to: SSSRLSPSSALY*QSLSRNVVCKR
Trigger: CCTCTTGCAAACCACGTTTCTGCTTAAACTCTGCCAATAAAGGGCACTGGAGGGAGACAGCCGGCTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560580.5
CDS CAA 72 bp AGCCTGGCAATAGAAGTCATGTCTGAGATGTCGTACTaGGGGTGGTTGGGAACAGAGCCAGGCATCCACCGT +
Preference number: 6 (lower is better)
Translates to: SLAIEVMSEMSY*GWLGTEPGIHR
Trigger: ACGGTGGATGCCTGGCTCTGTTCCCAACCACCCCAAGTACGACATCTCAGACATGACTTCTATTGCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CAA 72 bp CTCCTCCAGCCGGCTGTCTCCCTCCAGTGCCCTTTATaGGCAGAGTTTAAGCAGAAACGTGGTTTGCAAGAG +
Preference number: 6 (lower is better)
Translates to: LLQPAVSLQCPL*AEFKQKRGLQE
Trigger: CTCTTGCAAACCACGTTTCTGCTTAAACTCTGCCAATAAAGGGCACTGGAGGGAGACAGCCGGCTGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560580.5
CDS TCA 72 bp TTGCAGACGGTAGTGTCGAAGCAAAGAGTCAAACTCTaGGATGTTTTGCAGCCCCAGCCCTTGAGAGGCACC +
Preference number: 6 (lower is better)
Translates to: LQTVVSKQRVKL*DVLQPQPLRGT
Trigger: GGTGCCTCTCAAGGGCTGGGGCTGCAAAACATCTCAGAGTTTGACTCTTTGCTTCGACACTACCGTCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560111.5
ENST00000560580.5
CDS CCA 72 bp TCCCTGCCAGGGAGGCACAGGGTAAAACTGCACAGGTaGGAGGTTGAACAGACTGATTTAGTTCTCAGTACC +
Preference number: 6 (lower is better)
Translates to: SLPGRHRVKLHR*EVEQTDLVLST
Trigger: GGTACTGAGAACTAAATCAGTCTGTTCAACCTCCCACCTGTGCAGTTTTACCCTGTGCCTCCCTGGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560874.5
CDS TCA 72 bp CAAGTGAAGACTGGCGGTGTTCCGTGGCAGCAAATGTaGACAACCATGTCCCCTGATCTTCTAACCCTCCAA +
Preference number: 6 (lower is better)
Translates to: QVKTGGVPWQQM*TTMSPDLLTLQ
Trigger: TTGGAGGGTTAGAAGATCAGGGGACATGGTTGTTCACATTTGCTGCCACGGAACACCGCCAGTCTTCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396065.3
ENST00000558721.5
ENST00000559189.5
ENST00000559626.1
ENST00000560210.1
ENST00000560585.5
CDS TCA 72 bp CGTCCCACATGTATTCAGGAAGTATTTCCACGGCACTaGGCTCTGGAGCAAGTCTTCCATGCAGTTGAGGTC +
Preference number: 6 (lower is better)
Translates to: RPTCIQEVFPRH*ALEQVFHAVEV
Trigger: GACCTCAACTGCATGGAAGACTTGCTCCAGAGCTCAGTGCCGTGGAAATACTTCCTGAATACATGTGGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS TCA 72 bp AAACATTCTCAAGCCCAAGTCATTCAGGGAGGTCAGTaGGGCAGGAAGAATGCTTTGCCAGGCGTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: KHSQAQVIQGGQ*GRKNALPGVSL
Trigger: CAAGCTGACGCCTGGCAAAGCATTCTTCCTGCCTCACTGACCTCCCTGAATGACTTGGGCTTGAGAATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560585.5
CDS GCA 72 bp GTCCCAGCAAGTTCTGAGCATGTTTGTACATGCTCTTaGCCCACAGGTAGCAACGCTCTCATAGTGTGTCTC +
Preference number: 6 (lower is better)
Translates to: VPASSEHVCTCS*PTGSNALIVCL
Trigger: GAGACACACTATGAGAGCGTTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTCAGAACTTGCTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CAA 72 bp AGCCCACAAGTAATGCAGCTGGCAGAGTCTCTTCCATaGAACCATCGTCACAGAATGGGAGACAGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: SPQVMQLAESLP*NHRHRMGDRWR
Trigger: TCTCCACCTGTCTCCCATTCTGTGACGATGGTTCAATGGAAGAGACTCTGCCAGCTGCATTACTTGTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396065.3
ENST00000559189.5
ENST00000559200.1
ENST00000559626.1
ENST00000560585.5
CDS TCA 72 bp AAACATTCTCAAGCCCAAGTCATTCAGGGAGGTCAGTaGGGCAGGAAGAATGCTGGCAATATCCGACAAGGC +
Preference number: 6 (lower is better)
Translates to: KHSQAQVIQGGQ*GRKNAGNIRQG
Trigger: GCCTTGTCGGATATTGCCAGCATTCTTCCTGCCTCACTGACCTCCCTGAATGACTTGGGCTTGAGAATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559626.1
CDS CAA 72 bp ACTGCCTCTTGGTCCCCTCGGGTGACCCCTGAACAGTaGATAGACCTCTTTGCTGGAAGTTTCAGGAAATTA +
Preference number: 6 (lower is better)
Translates to: TASWSPRVTPEQ*IDLFAGSFRKL
Trigger: TAATTTCCTGAAACTTCCAGCAAAGAGGTCTATCAACTGTTCAGGGGTCACCCGAGGGGACCAAGAGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396065.3
ENST00000559189.5
ENST00000559200.1
ENST00000560585.5
CDS TCA 72 bp CTGGAGGAAGTGGCATTTAGGCTAATACTTGATGGGTaGGCAGAGATCAGCCAGACAAACAACAGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: LEEVAFRLILDG*AEISQTNNRRS
Trigger: GCTTCTCCTGTTGTTTGTCTGGCTGATCTCTGCTCACCCATCAAGTATTAGCCTAAATGCCACTTCCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560874.5
CDS CCA 72 bp TCTTCACAAGGCGTGATTCTGTTTCCAAGTGAAGACTaGCGGTGTTCCGTGGCAGCAAATGTGAACAACCAT +
Preference number: 6 (lower is better)
Translates to: SSQGVILFPSED*RCSVAANVNNH
Trigger: ATGGTTGTTCACATTTGCTGCCACGGAACACCGCCAGTCTTCACTTGGAAACAGAATCACGCCTTGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396065.3
ENST00000558721.5
ENST00000559189.5
ENST00000559626.1
ENST00000560210.1
ENST00000560585.5
CDS CCA 72 bp AGTCATTCAGGGAGGTCAGTGAGGCAGGAAGAATGCTaGCAATATCCGACAAGGCAAACAGATATTTCAGCC +
Preference number: 6 (lower is better)
Translates to: SHSGRSVRQEEC*QYPTRQTDISA
Trigger: GGCTGAAATATCTGTTTGCCTTGTCGGATATTGCCAGCATTCTTCCTGCCTCACTGACCTCCCTGAATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559626.1
CDS CAA 72 bp TCAGGCTCCTCTTTAATATCTTTGCCAGGCGTCAGCTaGGTCTTCTCATTGACAGGAAGCTCCTTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: SGSSLISLPGVS*VFSLTGSSLRS
Trigger: TGACCTCAAGGAGCTTCCTGTCAATGAGAAGACCAAGCTGACGCCTGGCAAAGATATTAAAGAGGAGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396065.3
ENST00000558721.5
ENST00000559189.5
ENST00000560874.5
CDS CAA 90 bp TTAGGAGGTACCTCTGACTCCATGCTATTCCTCCCATTCAACATCTaGAGAGCCTGGACCATCTCTGCATTGCTCTTTATAGGAAAGTCC +
Preference number: 6 (lower is better)
Translates to: LGGTSDSMLFLPFNI*RAWTISALLFIGKS
Trigger: GGACTTTCCTATAAAGAGCAATGCAGAGATGGTCCAGGCTCTCAAGATGTTGAATGGGAGGAATAGCATGGAGTCAGAGGTACCTCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CAA 90 bp ATCATCTACCTTTGGGTCAAACTTGTTGGCCAACAGGTGATGGTTTaGAAGCATCCAATTCAAGTCCCCAGCCCCATAAACGCAGATAGC +
Preference number: 6 (lower is better)
Translates to: IIYLWVKLVGQQVMV*KHPIQVPSPINADS
Trigger: GCTATCTGCGTTTATGGGGCTGGGGACTTGAATTGGATGCTTCAAAACCATCACCTGTTGGCCAACAAGTTTGACCCAAAGGTAGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CAA 90 bp TGGTTTGCAAGAGGCATGAATAACCTCCAGCATTACAAAGTAGAGTaGAGAAGGGTGGATTTCTCCTTTGCCAGGCGTCAGCTTGGTCTT +
Preference number: 6 (lower is better)
Translates to: WFARGMNNLQHYKVE*RRVDFSFARRQLGL
Trigger: AAGACCAAGCTGACGCCTGGCAAAGGAGAAATCCACCCTTCTCAACTCTACTTTGTAATGCTGGAGGTTATTCATGCCTCTTGCAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560580.5
CDS CCA 72 bp ACAAGATATTCCTACAGTACTGGCTTTGAGATTCCCTaGACTCCAGACCCAAGTGGTCAGAGTCACACTTCA +
Preference number: 6 (lower is better)
Translates to: TRYSYSTGFEIP*TPDPSGQSHTS
Trigger: TGAAGTGTGACTCTGACCACTTGGGTCTGGAGTCCAGGGAATCTCAAAGCCAGTACTGTAGGAATATCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396065.3
ENST00000559189.5
ENST00000559200.1
ENST00000560585.5
CDS CAA 72 bp CTTTGGGTCAAACTTGTTGGCCAACAGGTGATGGTTTaGAAGCATCCAATTCAAGTCCCCAGCCCCATAAAC +
Preference number: 6 (lower is better)
Translates to: LWVKLVGQQVMV*KHPIQVPSPIN
Trigger: GTTTATGGGGCTGGGGACTTGAATTGGATGCTTCAAAACCATCACCTGTTGGCCAACAAGTTTGACCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CAA 72 bp ATTTCTCCTTTGCCAGGCGTCAGCTTGGTCTTCTCATaGACAGGAAGCTCCTTGAGGTCATGTTCTTCATCT +
Preference number: 6 (lower is better)
Translates to: ISPLPGVSLVFS*TGSSLRSCSSS
Trigger: AGATGAAGAACATGACCTCAAGGAGCTTCCTGTCAATGAGAAGACCAAGCTGACGCCTGGCAAAGGAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560580.5
CDS CAA 72 bp AGAGGCATGAATAACCTCCAGCATTACAAAGTAGAGTaGAGAAGGGTGGATTTCTCCTTTGCCAGGCGTCAG +
Preference number: 6 (lower is better)
Translates to: RGMNNLQHYKVE*RRVDFSFARRQ
Trigger: CTGACGCCTGGCAAAGGAGAAATCCACCCTTCTCAACTCTACTTTGTAATGCTGGAGGTTATTCATGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560580.5
CDS CAA 72 bp AAGAATGCTTTGCCAGGCGTCAGCTTGGTCTTCTCATaGACAGGAAGCTCCTTGAGGTCATGTTCTTCATCT +
Preference number: 6 (lower is better)
Translates to: KNALPGVSLVFS*TGSSLRSCSSS
Trigger: AGATGAAGAACATGACCTCAAGGAGCTTCCTGTCAATGAGAAGACCAAGCTGACGCCTGGCAAAGCATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560585.5
CDS CAA 72 bp ACCATAGAGTATGCAATAGGGAACTCCACCTCTTCTTaGCTCAGTGGGAACTGTATGAACTTCCTTTCAGCC +
Preference number: 6 (lower is better)
Translates to: TIEYAIGNSTSS*LSGNCMNFLSA
Trigger: GGCTGAAAGGAAGTTCATACAGTTCCCACTGAGCAAAGAAGAGGTGGAGTTCCCTATTGCATACTCTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396065.3
ENST00000559200.1
ENST00000560585.5
CDS CAA 72 bp ACCTCTGACTCCATGCTATTCCTCCCATTCAACATCTaGAGAGCCTGGACCATCTCTGCATTGCTCTTTATA +
Preference number: 6 (lower is better)
Translates to: TSDSMLFLPFNI*RAWTISALLFI
Trigger: TATAAAGAGCAATGCAGAGATGGTCCAGGCTCTCAAGATGTTGAATGGGAGGAATAGCATGGAGTCAGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS GCA 72 bp GGACACAATCCTGGACAAAAATCCTTAGTAAAGACCTaGCTAGAAGCCCCTTACATCTGGTTTGTTGATGGA +
Preference number: 6 (lower is better)
Translates to: GHNPGQKSLVKT*LEAPYIWFVDG
Trigger: TCCATCAACAAACCAGATGTAAGGGGCTTCTAGGCAGGTCTTTACTAAGGATTTTTGTCCAGGATTGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559200.1
CDS CAA 72 bp TTAATATCTTTGCCAGGCGTCAGCTTGGTCTTCTCATaGACAGGAAGCTCCTTGAGGTCATGTTCTTCATCT +
Preference number: 6 (lower is better)
Translates to: LISLPGVSLVFS*TGSSLRSCSSS
Trigger: AGATGAAGAACATGACCTCAAGGAGCTTCCTGTCAATGAGAAGACCAAGCTGACGCCTGGCAAAGATATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396065.3
ENST00000558721.5
ENST00000559189.5
ENST00000560874.5
CDS CAA 90 bp AATATCCGACAAGGCAAACAGATATTTCAGCCAGAACAGCCCAGTTaGTACCTGTGTCACCAACTATTCATAAAAGCCTGTCAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: NIRQGKQIFQPEQPS*YLCHQLFIKACQCS
Trigger: TGAGCACTGACAGGCTTTTATGAATAGTTGGTGACACAGGTACAAACTGGGCTGTTCTGGCTGAAATATCTGTTTGCCTTGTCGGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559626.1
CDS TCA 72 bp GCTCGCAGTAGCCTTTCAAAGTTTTCAATCTTCTCATaGATCACCATAGAGTATGCAATAGGGAACTCCACC +
Preference number: 6 (lower is better)
Translates to: ARSSLSKFSIFS*ITIEYAIGNST
Trigger: GGTGGAGTTCCCTATTGCATACTCTATGGTGATTCATGAGAAGATTGAAAACTTTGAAAGGCTACTGCGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396065.3
ENST00000559200.1
ENST00000560585.5
CDS TCA 72 bp GTTCTAGGTAGTGGGCTCTTAACAAAGATGAAGTTATaGACTCTAGCCACAGACAAACGGTTGAAAGACCCA +
Preference number: 6 (lower is better)
Translates to: VLGSGLLTKMKL*TLATDKRLKDP
Trigger: TGGGTCTTTCAACCGTTTGTCTGTGGCTAGAGTTCATAACTTCATCTTTGTTAAGAGCCCACTACCTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560111.5
CDS CCA 72 bp ATCAGTTGTTGGGATTTAGGGTTCTTCAAAACATGTTaGACGAAATCTCGGGAAGCCACAATGTACGCATTC +
Preference number: 6 (lower is better)
Translates to: ISCWDLGFFKTC*TKSREATMYAF
Trigger: GAATGCGTACATTGTGGCTTCCCGAGATTTCGTCCAACATGTTTTGAAGAACCCTAAATCCCAACAACTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CAA 72 bp TTTGGGAAGCAAGAAATAATTGCTTTGACCGCCTCTTaGAAAGTTTCTGGGGACTTCTCATCCACATGGACA +
Preference number: 6 (lower is better)
Translates to: FGKQEIIALTAS*KVSGDFSSTWT
Trigger: TGTCCATGTGGATGAGAAGTCCCCAGAAACTTTCAAAGAGGCGGTCAAAGCAATTATTTCTTGCTTCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CAA 90 bp TACCCATTCAATCAGTTGTTGGGATTTAGGGTTCTTCAAAACATGTaGGACGAAATCTCGGGAAGCCACAATGTACGCATTCCCTGTAAA +
Preference number: 6 (lower is better)
Translates to: YPFNQLLGFRVLQNM*DEISGSHNVRIPCK
Trigger: TTTACAGGGAATGCGTACATTGTGGCTTCCCGAGATTTCGTCCAACATGTTTTGAAGAACCCTAAATCCCAACAACTGATTGAATGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CAA 90 bp AACGTAGGTATTCTTCTAAGCACTGAAGAGCATTATCATCTACCTTaGGGTCAAACTTGTTGGCCAACAGGTGATGGTTTTGAAGCATCC +
Preference number: 6 (lower is better)
Translates to: NVGILLSTEEHYHLP*GQTCWPTGDGFEAS
Trigger: GGATGCTTCAAAACCATCACCTGTTGGCCAACAAGTTTGACCCAAAGGTAGATGATAATGCTCTTCAGTGCTTAGAAGAATACCTACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CCA 72 bp GCTCTCATAGTGTGTCTCAAAGTTCAGTCCCATAGATaGCCTTATAACGTAGGTATTCTTCTAAGCACTGAA +
Preference number: 6 (lower is better)
Translates to: ALIVCLKVQSHR*PYNVGILLSTE
Trigger: TTCAGTGCTTAGAAGAATACCTACGTTATAAGGCCATCTATGGGACTGAACTTTGAGACACACTATGAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CAA 72 bp AATCAGTTGTTGGGATTTAGGGTTCTTCAAAACATGTaGGACGAAATCTCGGGAAGCCACAATGTACGCATT +
Preference number: 6 (lower is better)
Translates to: NQLLGFRVLQNM*DEISGSHNVRI
Trigger: AATGCGTACATTGTGGCTTCCCGAGATTTCGTCCAACATGTTTTGAAGAACCCTAAATCCCAACAACTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5
CDS CAA 72 bp ATTCTTCTAAGCACTGAAGAGCATTATCATCTACCTTaGGGTCAAACTTGTTGGCCAACAGGTGATGGTTTT +
Preference number: 6 (lower is better)
Translates to: ILLSTEEHYHLP*GQTCWPTGDGF
Trigger: AAAACCATCACCTGTTGGCCAACAAGTTTGACCCAAAGGTAGATGATAATGCTCTTCAGTGCTTAGAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396065.3
ENST00000560585.5