RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GCN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000089154

Ensembl transcript IDs: ENST00000300648.7, ENST00000547263.1, ENST00000547369.5, ENST00000548132.1, ENST00000548821.1, ENST00000549815.1, ENST00000550471.1, ENST00000551549.1, ENST00000551920.1

Found 692 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTaGCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTC +
Preference number: 1 (lower is better)
Translates to: KAKPDTPHWAEIHRL*PTRDIGKRLVAPAL
Trigger: GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR GCA 90 bp AGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTaGCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCC +
Preference number: 1 (lower is better)
Translates to: SSRPSHAKLDKQLLG*HLLRRMRVLFLLFS
Trigger: GGAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR TCA 90 bp CTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTaGCCCTGCTATTATAGTTCCAGACCTAGCCATGCTAAACTGGAC +
Preference number: 1 (lower is better)
Translates to: LSNQSSSTGEEEPTV*PCYYSSRPSHAKLD
Trigger: GTCCAGTTTAGCATGGCTAGGTCTGGAACTATAATAGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR TCA 90 bp CATTTTCATCTGACAGGGGTCAGATCCATTCAGACCTCACAATATTaGAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGT +
Preference number: 1 (lower is better)
Translates to: HFHLTGVRSIQTSQY*KAKPDTPHWAEIHR
Trigger: ACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAATGGATCTGACCCCTGTCAGATGAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR-3UTR GCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGATGTGGAGCGGCAATaGTGCTGCTGGCCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: SNSLSNLYPSPDLGTARADVERQ*CCWPRP
Trigger: AGGCCTGGGCCAGCAGCAGCATTGCCGCTCCACATC...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR-3UTR TCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACTGGGCTGCCATTTGCTaGGGCGCATGCGTGTGCTTT +
Preference number: 2 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNWAAIC*GACVCF
Trigger: AAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCA...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR CAA 90 bp GCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTaGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: AEIHRLCPTRDIGKR*VAPALKPELKHRRR
Trigger: TCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR-3UTR TCA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAAGTTGTGTGTGGGTTTaGTTTAAGGCTTTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQSCVWV*FKALAV
Trigger: CACAGCCAAAGCCTTAAATCAAACCCACACACAACT...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR-3UTR CCA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTCTAGCCATGCTAAACTaGACAAACAGCTCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCLAMLN*TNSSWA
Trigger: AGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAG...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR-3UTR TCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAGAGGAACCCACAGTCTaGCCCTGCTATTATAGTTCC +
Preference number: 2 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQREEPTV*PCYYSS
Trigger: GGAACTATAATAGCAGGGTCAGACTGTGGGTTCCTC...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR-3UTR CAA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGCTCCTGGGCTGCCATTaGCTGAGGCGCATGCGTGTG +
Preference number: 3 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSLLGCH*LRRMRV
Trigger: CACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAG...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR GCA 72 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTaGCCCACTCGGGATATAGGAAAAAGGTTGGTAGCG +
Preference number: 3 (lower is better)
Translates to: PDTPHWAEIHRL*PTRDIGKRLVA
Trigger: CGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR GCA 72 bp CCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTaGCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTT +
Preference number: 3 (lower is better)
Translates to: PSHAKLDKQLLG*HLLRRMRVLFL
Trigger: AAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR TCA 72 bp CTAAACTGGACAAACAGCTCCTGGGCTGCCATTTGCTaGGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: LNWTNSSWAAIC*GACVCFSFSSP
Trigger: TGGAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGCTGTTTGTCCAGTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR TCA 72 bp CAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTaGCCCTGCTATTATAGTTCCAGACCTAGCCATGCT +
Preference number: 3 (lower is better)
Translates to: QSSSTGEEEPTV*PCYYSSRPSHA
Trigger: AGCATGGCTAGGTCTGGAACTATAATAGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR-3UTR CAA 90 bp ACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGATATAGGAAAAAGGTaGGTAGCGCCAGCTCTCAAA +
Preference number: 3 (lower is better)
Translates to: TILKSQARHTTLGRDPPSDIGKR*VAPALK
Trigger: TTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATC...AGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGTCCACCCGCCCGGGTaGGGTGTTGGGGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRVHPPG*GVGGGP
Trigger: AGGGCCTCCCCCAACACCCCACCCGGGCGGGTGGAC...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGAGCCGCCTCCGGACCTaGGCCTCCCTGTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSSRLRT*ASLSSW
Trigger: CCAGCTAGACAGGGAGGCGCAGGTCCGGAGGCGGCT...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGTGGAGCGGCAATGCTaGTGCTGGCCCAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRVERQC*CWPRPL
Trigger: GAGAGGCCTGGGCCAGCAGCAGCATTGCCGCTCCAC...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGTGCCGCACCACCAGCTaGGTGTCTGAGCGGCCCATG +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSCRTTS*VSERPM
Trigger: CATGGGCCGCTCAGACACCCAGCTGGTGGTGCGGCA...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGAGTTTGGCCGGCAACTaGCCTCCGCCTGTCTCGATG +
Preference number: 4 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRSLAGN*PPPVSM
Trigger: CATCGAGACAGGCGGAGGGCAGTTGCCGGCCAAACT...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGATGTGGAGCGGCAATaGTGCTGCTGGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSDVERQ*CCWPRP
Trigger: AGGCCTGGGCCAGCAGCAGCATTGCCGCTCCACATC...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGGGTGGCAAGCAGCTaGCTACGGACTCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSGVASS*LRTPGP
Trigger: AGGTCCAGGAGTCCGTAGCCAGCTGCTTGCCACCCC...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGAGCCTGGTGGCCGATaGTGGAATGCAGCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTREPGGR*WNAAAR
Trigger: TCGAGCAGCTGCATTCCACCATCGGCCACCAGGCTC...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGCTGGCACACCGGAGATaGCACACAGAGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSLAHRR*HTEPPA
Trigger: TGCAGGAGGCTCTGTGTGTCATCTCCGGTGTGCCAG...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGCCTGCAGGGCTTTGGTaGAAGTGGTCTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSPAGLW*KWSAAG
Trigger: CCCAGCTGCAGACCACTTTCACCAAAGCCCTGCAGG...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGTCTCAGCCACCAGCCTaGTGTCGCTGGATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRSQPPA*CRWMGS
Trigger: AGAACCCATCCAGCGACATCAGGCTGGTGGCTGAGA...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGTGGGCCTCAGCCAACTaGTGGATGGCTGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSWASAN*WMAACK
Trigger: CTTGCAGGCAGCCATCCAGCAGTTGGCTGAGGCCCA...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGCCCATGTACAGCCCTaGCAACACCCGGTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDIAHVQP*QHPVPP
Trigger: CGGCGGAACCGGGTGTTGGCAGGGCTGTACATGGGC...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATATTCCGAACTGTCTGCTaGGCCTGCCTGCGGACGTGC +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDIFRTVC*ACLRTC
Trigger: GCACGTCCGCAGGCAGGCTCAGCAGACAGTTCGGAA...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGCCTTCACATTCCAGCTaGACCTGTCCCCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSPSHSS*TCPPGC
Trigger: GCATCCTGGGGGACAGGTTCAGCTGGAATGTGAAGG...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGCGATGTTTTTCCGGATaGCGGCATCCACTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRRCFSG*RHPLWP
Trigger: GGGCCAAAGTGGATGCCGTCATCCGGAAAAACATCG...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGAGGCGGCAGAGCCACTaGTCTTACTGGGAACACCTG +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSRRQSH*SYWEHL
Trigger: CAGGTGTTCCCAGTAAGAGCAGTGGCTCTGCCGCCT...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCGCACCATCCACGGCGTaGTTGTGGGAGCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLAPSTA*LWEPPS
Trigger: GCTGGGTGGCTCCCACAAGCACGCCGTGGATGGTGC...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGTGGTGGGAACCTGAGTaGTTTGGGAGGCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRWWEPE*FGRLPS
Trigger: AGAAGGCAGCCTCCCAAAGCACTCAGGTTCCCACCA...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCACATGCAGGGACGCCTaGCGCACCACCAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLTCRDA*RTTSWV
Trigger: CACCCAGCTGGTGGTGCGGCAGGCGTCCCTGCATGT...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGACCCGGCTGAGGAGATaGGAGTGTTGTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRTRLRR*ECCPHR
Trigger: ACGATGAGGACAACACTCGCATCTCCTCAGCCGGGT...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGATGTCCTCCAGAGCCTaGTGGCCGATGGTGGAATGC +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSMSSRA*WPMVEC
Trigger: GCATTCCACCATCGGCCACCAGGCTCTGGAGGACAT...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGACACCACGTGATGACTaGCGCTCCCAATCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSTPRDD*RSQSLR
Trigger: TCTCAGGGATTGGGAGCGTCAGTCATCACGTGGTGT...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCCCAGCACCCGGGTGTTaGCAGGTGGCGTTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALPAPGC*QVALSA
Trigger: AGCTGACAACGCCACCTGTCAACACCCGGGTGCTGG...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCCAACTGCTGGATGGCTaGCTGCAAGGCCCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALQLLDG*LQGPAG
Trigger: TCCCGCAGGGCCTTGCAGGCAGCCATCCAGCAGTTG...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGAGTGCTTTGGGAGGCTaGCTTCTCCACTGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRSALGG*LLHCLD
Trigger: ATCCAGACAGTGGAGAAGGCAGCCTCCCAAAGCACT...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAATGCGGACGTGCCAGGTaGGGCTCAGGAGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCECGRAR*GSGAPP
Trigger: TGGCGGTGCTCCTGAGCCGCACCTGGCACGTCCGCA...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGAGGGCTTCGGCCCCTaGCTGCCTTACAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: VPHSGYRKKVGSASSQTREGFGP*LPYSRL
Trigger: GAGGCGGCTGTAAGGCAGGCAGGGGCCGAAGCCCTC...TCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCGCTTCAGCGAGAGGATaGCCAGGCCCTTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALASARG*PGPSPG
Trigger: GCCTGGTGAAGGGCCTGGGCATCCTCTCGCTGAAGC...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGATGGTGGAATGCAGCTaGTCGAAAGTCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRMVECS*SKVLAA
Trigger: GGCAGCCAAGACTTTCGAGCAGCTGCATTCCACCAT...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAACTTCCCCAGAGCATCTaGGGCCTTCAGGCGCACCCC +
Preference number: 4 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQLPQSI*GLQAHP
Trigger: GGGGTGCGCCTGAAGGCCGCAGATGCTCTGGGGAAG...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCGCCAGGCTCCGCCCGTaGCGAACCATCCAGTCAATG +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALARLRP*RTIQSM
Trigger: CATTGACTGGATGGTTCGGCACGGGCGGAGCCTGGC...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGAAAACAGGGATGTACTaGGTCAGGCCGGACGGGTTC +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSKTGMY*VRPDGF
Trigger: GAACCCGTCCGGCCTGACCCAGTACATCCCTGTTTT...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCACAAGGGCGCAGCACCTaGCTCCCCCTTGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPQGRST*LPLAHP
Trigger: AGGGTGGGCAAGGGGGAGCCAGGTGCTGCGCCCTTG...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCTGGAGTCGGCCTGGCTaGCCAGCTTCTTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALWSRPG*PASSGT
Trigger: GGTCCCTGAAGAAGCTGGCCAGCCAGGCCGACTCCA...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAGGGCGCTCTTGTGCTaGCTGACCACGTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALRALLC*LTTSIS
Trigger: GGAGATGGACGTGGTCAGTCAGCACAAGAGCGCCCT...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGCACCTTGTGAGAACTaGGGACAGTCTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSAPCEN*GQSSAP
Trigger: AGGAGCTGAAGACTGTCCTCAGTTCTCACAAGGTGC...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGACGGAGCCGATCTGCCTaGGCGCCTGCTGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KRLVAPALKPELKHRRRGRSRSA*APAVQP
Trigger: AGGCTGGACAGCAGGCGCTCAGGCAGATCGGCTCCG...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAACCCCTGTGCAGCGCCTaGGCGATCCACAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCEPLCSA*AIHRAL
Trigger: CAGAGCTCTGTGGATCGCTCAGGCGCTGCACAGGGG...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGCATCACCAGCCACTaGCGAAAGGAAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDIGITSH*RKESQH
Trigger: GTGCTGGCTTTCCTTTCGTCAGTGGCTGGTGATGCC...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAAGCAGCATGGTGTCCCTaGCACCTGGGTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKAAWCP*HLGPPW
Trigger: CCATGGAGGACCCAGGTGTCAGGGACACCATGCTGC...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCATGCTGGATGGCTGCCTaGAAGGCCCTGCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPCWMAA*KALREA
Trigger: AGCCTCCCGCAGGGCCTTGCAGGCAGCCATCCAGCA...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGTGCTTGCTGGTCAGCTaGACCTCCTCTTTGATGCCT +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSCLLVS*TSSLMP
Trigger: AGGCATCAAAGAGGAGGTGCAGCTGACCAGCAAGCA...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGATCCCCATCCAGCTCCTaGAGCCGCCTCCGGACCTGC +
Preference number: 4 (lower is better)
Translates to: KRLVAPALKPELKHRRRGSPSSS*SRLRTC
Trigger: GCAGGTCCGGAGGCGGCTGCAGGAGCTGGATGGGGA...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTTCCACGGCGTGCTTGTaGGAGCCACCCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPASTACL*EPPSTS
Trigger: GGAGGTGCTGGGTGGCTCCCACAAGCACGCCGTGGA...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACGGTGCTGATGAGCTGTaGGAGGACCCGGTCCGGCGA +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNGADEL*EDPVRR
Trigger: TCGCCGGACCGGGTCCTCCCACAGCTCATCAGCACC...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCTCCTCCTCACTGTGGTaGGGCATCTCCGTCAGCACC +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLSSSLW*GISVST
Trigger: GGTGCTGACGGAGATGCCCCACCACAGTGAGGAGGA...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAAGACTCCTGGACCTGCTaGGAGGGGGTGGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCEDSWTC*EGVERA
Trigger: TGCCCTCTCCACCCCCTCCCAGCAGGTCCAGGAGTC...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAAGGCCAGGCGTCACGCTaGGCAGGTACGGAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCEGQASR*AGTEPS
Trigger: ACTTGGCTCCGTACCTGCCCAGCGTGACGCCTGGCC...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCTCCTCCAGAGCCTGGTaGCCGATGGTGGAATGCAGC +
Preference number: 4 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPSSRAW*PMVECS
Trigger: GCTGCATTCCACCATCGGCCACCAGGCTCTGGAGGA...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCCCGGGTGTTGACAGGTaGCGTTGTCAGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLPGVDR*RCQLGH
Trigger: GTGCCCAAGCTGACAACGCCACCTGTCAACACCCGG...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTCCTCAGGGCTGCGGGTaGCCTCCAGCAGATCCTCGA +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPAPQGCG*PPADPR
Trigger: TCGAGGATCTGCTGGAGGCCACCCGCAGCCCTGAGG...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGCTTTCCACAGCTTCGTaGGTTTCTTCACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRLSTAS*VSSQHH
Trigger: ATGGTGCTGTGAAGAAACTCACGAAGCTGTGGAAAG...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGGATGGGGCATCAATaGAGTGGACAAACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSGMGHQ*SGQTWC
Trigger: ACACCAAGTTTGTCCACTTCATTGATGCCCCATCCC...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTCACCAGCTGGGTGTCTaGGCGGCCCATGTACAGCCC +
Preference number: 4 (lower is better)
Translates to: SNSLSNLYPSPDLGTARAHQLGV*AAHVQP
Trigger: GGGCTGTACATGGGCCGCTCAGACACCCAGCTGGTG...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCACGCCAAGATGACGGGTaGGGGCATCACCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPRQDDG*GHHQPL
Trigger: CAGTGGCTGGTGATGCCCTCACCCGTCATCTTGGCG...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCAGGATCACGCCAAGATaGCGGGTGAGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLRITPR*RVRASP
Trigger: TGGTGATGCCCTCACCCGTCATCTTGGCGTGATCCT...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAATTGGCCCCTGCTCCCTaGATCACAAACCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKLAPAP*ITNLRA
Trigger: GGCCCTGAGGTTTGTGATTCAGGGAGCAGGGGCCAA...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCTGGGCTGCCATTTGCTaGGGCGCATGCGTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPWAAIC*GACVCF
Trigger: AAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCA...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAAGTAAGTCCAGGGCCTaGAACAGCGTGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQSKSRA*NSVSPR
Trigger: CCGGGGTGACACGCTGTTGCAGGCCCTGGACTTACT...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAGCCTGCCTGCGGACGTaGCAGGTGCGGCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRACLRT*QVRLRS
Trigger: GCTCCTGAGCCGCACCTGGCACGTCCGCAGGCAGGC...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCGAGCGTTGCGAGGGCTaGATCCAACATGCACTTCCG +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLERCEG*IQHALP
Trigger: CGGAAGTGCATGTTGGATGCAGCCCTCGCAACGCTC...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTGGCCCCAAGGGCCTTTaGAGATACGGTCCGCACCTC +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPAGPKGL*RYGPHL
Trigger: GAGGTGCGGACCGTATCTGCAAAGGCCCTTGGGGCC...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGCCACGGAAAGTaGCAGGCTCCGCCCGTGCCG +
Preference number: 4 (lower is better)
Translates to: TRDIGKRLVAPALKPELKHSHGK*QAPPVP
Trigger: CGGCACGGGCGGAGCCTGGCACTTTCCGTGGCTGTG...CTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACATGGTGTCGTCCACCTaGTCCGTGGAGTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNMVSST*SVESAW
Trigger: CCAGGCCGACTCCACGGAGCAGGTGGACGACACCAT...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCGGCAATGCTGCTaGTGGCCCAGGCCTCTCATG +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPERQCC*WPRPLM
Trigger: CATGAGAGGCCTGGGCCAGCAGCAGCATTGCCGCTC...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGCTTCACTGCTCCCTCTaGAAGATCTTTTCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRLHCSL*KIFSSN
Trigger: GTTGCTGGAAAAGATCTTCCAGAGGGAGCAGTGAAG...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCACAGCCAACTGCTGGATaGCTGCCTGCAAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPQPTAG*LPARPC
Trigger: GCAGGGCCTTGCAGGCAGCCATCCAGCAGTTGGCTG...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACGCCTCAGCCAACTGCTaGATGGCTGCCTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNASANC*MAACKA
Trigger: GGCCTTGCAGGCAGCCATCCAGCAGTTGGCTGAGGC...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATACGGAAAGGGAGCCCATaGCATTCATGGAGGACTGGT +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDIRKGSP*HSWRTG
Trigger: ACCAGTCCTCCATGAATGCCATGGGCTCCCTTTCCG...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCCTGCTGGTGATGGTGTaGGTGTGCAGCAGCATCACC +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLLLVMV*VCSSIT
Trigger: GGTGATGCTGCTGCACACCCACACCATCACCAGCAG...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGATGGAGATAACCCGCTaGCCCGCGCGCAGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: TRDIGKRLVAPALKPELKMEITR*PARRAV
Trigger: CACCGCCCTGCGCGCGGGCCAGCGGGTTATCTCCAT...CTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAAGGCCAGCATGACCGCTaGGAGGATCACGCCAAGATG +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKGQHDR*EDHAKM
Trigger: CATCTTGGCGTGATCCTCCCAGCGGTCATGCTGGCC...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGACCCCGCTCACCGCAATaGGGATCCTGTCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARPRSPQ*GSCPPW
Trigger: CCACGGCGGACAGGATCCCCATTGCGGTGAGCGGGG...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAGCTGAAGGAACGGGATaGACAGCTCAGCCACGATCC +
Preference number: 4 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQAEGTG*TAQPRS
Trigger: GGATCGTGGCTGAGCTGTTCATCCCGTTCCTTCAGC...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGTCCTGCTGGGCACTCTaGATGATGGATTTGTCATAC +
Preference number: 4 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSSCWAL*MMDLSY
Trigger: GTATGACAAATCCATCATTCAGAGTGCCCAGCAGGA...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCACTCCAGCATCCTCCTTaGTGGCTGGCACAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPLQHPP*WLAQGV
Trigger: CACCCCTTGTGCCAGCCATCAAGGAGGATGCTGGAG...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCCTCTGCGTACTTGTCTaGCTCCAGCAGCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALLCVLV*LQQLLH
Trigger: ATGCAGCAGCTGCTGGAGTCAGACAAGTACGCAGAG...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCACCAGCTTCACCCCGTaGGCACTCAAGTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLTSFTP*ALKLLI
Trigger: GATGAGCAACTTGAGTGCTCACGGGGTGAAGCTGGT...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGACCTTCAGGGCCAGCATaGCCGCTGGGAGGATCACGC +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARPSGPA*PLGGSR
Trigger: GCGTGATCCTCCCAGCGGTCATGCTGGCCCTGAAGG...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAACTGCCTGCAAGGCCCTaGGGGAGGCTGCATCTCTAT +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCELPARP*GRLHLY
Trigger: ATAGAGATGCAGCCTCCCGCAGGGCCTTGCAGGCAG...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCATGGCCGAAGAGTCACTaGACTGGCGTGCCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPWPKSH*TGVPGS
Trigger: GGAACCTGGCACGCCAGTGCAGTGACTCTTCGGCCA...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCTGCTGAGCCTGCCTaGGGACGTGCCAGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRSAEPA*GRARCG
Trigger: GCCGCACCTGGCACGTCCGCAGGCAGGCTCAGCAGA...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTACACACAGAGCCTCCTaGAGGACCCGTGGAGGCACG +
Preference number: 4 (lower is better)
Translates to: SNSLSNLYPSPDLGTARATHRAS*RTRGGT
Trigger: CGTGCCTCCACGGGTCCTGCAGGAGGCTCTGTGTGT...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTCGTCACCAGGCGCAGTaGAGGGTTCTGCACGGAGGC +
Preference number: 4 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCRHQAQ*RVLHGG
Trigger: GCCTCCGTGCAGAACCCTGCACTGCGCCTGGTGACG...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCTCCCCAGCAGGGGTCTaGATAATGGCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPSPAGV*IMANSS
Trigger: GGAGGAGTTTGCCATTATGCAGACCCCTGCTGGGGA...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCGCATCTCCTTCTGCTTaGTGGTCAGCTGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPASPSA*WSAAPP
Trigger: AGGAGGTGCAGCTGACCAGCAAGCAGAAGGAGATGC...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGACGGACTCCTGGACCTaGTGGGAGGGGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FQTAFQTYTPPQTWELPETDSWT*WEGVER
Trigger: CCTCTCCACCCCCTCCCAGCAGGTCCAGGAGTCCGT...CTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCGCCATCATCTCCTGTTaGTTCAGCGAGAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPAIISC*FSERMP
Trigger: GGGCATCCTCTCGCTGAAGCAACAGGAGATGATGGC...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATACTTGGCACAGTCATCTaGAGCCTCACGCACATACTG +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDILGTVI*SLTHIL
Trigger: CAGTATGTGCGTGAGGCTGCAGATGACTGTGCCAAG...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAAGACAGGATGACAGCTaGTTAGGAGCACAGTACGCC +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDIRQDDS*LGAQYA
Trigger: GGCGTACTGTGCTCCTAAGCAGCTGTCATCCTGTCT...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAAATCTGCCTGAGCGCCTaGTGTCCAGCCTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKICLSA*CPAFWT
Trigger: AGTCCAGAAGGCTGGACAGCAGGCGCTCAGGCAGAT...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCGCCAATAATCTGGGCTaGCATCTTCCGCGTGTCCGT +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLANNLG*HLPRVR
Trigger: ACGGACACGCGGAAGATGGCAGCCCAGATTATTGGC...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATATGTCCGCCGTGGCACTaGTCAGGATCATTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDICPPWH*SGSFPE
Trigger: TTCAGGAAATGATCCTGAGCAGTGCCACGGCGGACA...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATATCGCTTGGCTCTCGATaGAAAGACAATGCGCACCAG +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDISLGSR*KDNAHQ
Trigger: CTGGTGCGCATTGTCTTTCCATCGAGAGCCAAGCGA...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTCCTGCAGGACCCGTaGAGGCACGTAGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FQTAFQTYTPPQTWELPELLQDP*RHVGLA
Trigger: GGCAAGGCCTACGTGCCTCCACGGGTCCTGCAGGAG...CTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGCCTCCCTGTCTAGCTaGGCCTGCAGCATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPASLSS*ACSISF
Trigger: GAAGGAGATGCTGCAGGCCCAGCTAGACAGGGAGGC...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGACATCACCACTGCTGCTaGCACACAGGGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VPHSGYRKKVGSASSQTRHHHCC*HTGWSG
Trigger: CCCTGACCACCCTGTGTGCCAGCAGCAGTGGTGATG...TCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCCGGTTTCCCGCACGCTaGCACACGGGGACTGCAAGG +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAARFPAR*HTGTAR
Trigger: CCTTGCAGTCCCCGTGTGCCAGCGTGCGGGAAACCG...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCAAAGCATCCAGCACTaGGGGCGGCCGGTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNQSIQH*GRPVEL
Trigger: AAGCTCTACCGGCCGCCCCCAGTGCTGGATGCTTTG...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAAGCACTTCCGGACATCTaGGTGTCGGTCATTGAGGGC +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKALPDI*VSVIEG
Trigger: GCCCTCAATGACCGACACCCAGATGTCCGGAAGTGC...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGACTGGCTACGGACTCCTaGACCTGCTGGGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARLATDS*TCWEGV
Trigger: CACCCCCTCCCAGCAGGTCCAGGAGTCCGTAGCCAG...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCTCCGTGGAACGGTCCTaGAAGGCTCTCTGGACAATG +
Preference number: 4 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPSVERS*KALWTM
Trigger: CATTGTCCAGAGAGCCTTCCAGGACCGTTCCACGGA...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCACCATGCCCTTCACCATaGCCCCAAGGGCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPPCPSP*PQGPLQ
Trigger: CTGCAAAGGCCCTTGGGGCCATGGTGAAGGGCATGG...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAACGGGAGGCAGAATCCTaGCACATGCTCGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQREAES*HMLAFA
Trigger: AGCAAAGGCGAGCATGTGCCAGGATTCTGCCTCCCG...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCCCAAGCCTAAGGCTTTaGCTGCCTCCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLPSLRL*LPPPSA
Trigger: AGCAGAAGGAGGAGGCAGCCAAAGCCTTAGGCTTGG...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAACAGGCTGGAAAGTTTaGCCGGCAACTGCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: VPHSGYRKKVGSASSQTRTGWKV*PATALR
Trigger: GCGGAGGGCAGTTGCCGGCCAAACTTTCCAGCCTGT...TCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACGTCCATCTCCTTGTaGCTCGTGCAGAACTGCACC +
Preference number: 4 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQTSISL*LVQNCT
Trigger: GGTGCAGTTCTGCACGAGTCACAAGGAGATGGACGT...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTCGGCAACCCCTTCAGTaGTGGTGGGAACCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: SNSLSNLYPSPDLGTARARQPLQ*WWEPEC
Trigger: GCACTCAGGTTCCCACCATCACTGAAGGGGTTGCCG...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTGGTTCTTGGCCAGGATaGTGTCCAGCAGTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPAGSWPG*CPAVQA
Trigger: CGCTTGGACTGCTGGACATCATCCTGGCCAAGAACC...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAACAAGAAGGGGTTCTTaGTCCTGGGAGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPTRRGS*SWEQPG
Trigger: CCCTGGCTGCTCCCAGGATCAAGAACCCCTTCTTGT...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCTGGGTGTCGGTCATTaGGGGCATCAGGGACAAAAA +
Preference number: 4 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPLGVGH*GHQGQK
Trigger: TTTTTGTCCCTGATGCCCTCAATGACCGACACCCAG...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAACCTTCCCATGAGTGTTaGGCGTTGCGAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCEPSHEC*ALRGLH
Trigger: ATGCAGCCCTCGCAACGCTCAACACTCATGGGAAGG...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAACAGCCTTCTGGACTTTaGCATGGGAGTCGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKQPSGL*HGSRSA
Trigger: TGCTGACCGACTCCCATGTCAAAGTCCAGAAGGCTG...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTCAGGGCTGGAGTCATTaGAGAGGCGGATCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCQGWSH*RGGSGP
Trigger: CGGGCCTGATCCGCCTCTTCAATGACTCCAGCCCTG...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCTGCTCTCGTTCCCTATaGGCCGGATTTCCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPCSRSL*AGFPCA
Trigger: TGCACAAGGAAATCCGGCTCATAGGGAACGAGAGCA...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp GTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGGTCGCTGTAGGCCCTaGCCACGGTGTTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: VPHSGYRKKVGSASSQTRGRCRP*PRCSYP
Trigger: AGGATAAGAACACCGTGGTCAGGGCCTACAGCGACC...TCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAACATCATCACCACTGCTaGTGGCACACAGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKHHHHC*WHTGWS
Trigger: TGACCACCCTGTGTGCCAGCAGCAGTGGTGATGATG...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAAGCCATCATCACCACTaGTGCTGGCACACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VPHSGYRKKVGSASSQTRSHHHH*CWHTGW
Trigger: CCACCCTGTGTGCCAGCAGCAGTGGTGATGATGGCT...TCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCCTGGCACACGGGGACTaGAAGGCACAGAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAALAHGD*KAQSST
Trigger: CGTGCTGCTCTGTGCCTTGCAGTCCCCGTGTGCCAG...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCGACTCCAGCAGCTGCTaGATAAGCCTCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPDSSSC*ISLWII
Trigger: GATGATCCAGAGGCTTATGCAGCAGCTGCTGGAGTC...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCGTTTCCCCAGCATGGTaGAGAGCATCTCGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALVSPAW*RASRRQ
Trigger: TTGCCTTCGAGATGCTCTGCACCATGCTGGGGAAAC...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAATAACGGAGCCGATCTaGCTGAGCGCCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VPHSGYRKKVGSASSQTRITEPI*LSACCP
Trigger: TGGACAGCAGGCGCTCAGGCAGATCGGCTCCGTTAT...TCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGACAGCAGCTTGCCTCATaGCCACCTCAGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRQQLAS*PPQGCG
Trigger: CCCGCAGCCCTGAGGTGGGCATGAGGCAAGCTGCTG...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCCAGAATCCTGGCACATaGTCGCCTTTGCTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALQNPGT*SPLLSF
Trigger: GAACGAGAGCAAAGGCGAGCATGTGCCAGGATTCTG...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAATCCGCCAGCAAGCACTaGTGTAGAACGGCACTAAGC +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKSASKH*CRTALS
Trigger: GCTTAGTGCCGTTCTACAGCAGTGCTTGCTGGCGGA...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACGAAGAGTCACTGCACTaGCGTGCCAGGTTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNEESLH*RARFRS
Trigger: ACTGCGGAACCTGGCACGCCAGTGCAGTGACTCTTC...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAAATCACCCTTGAGCCCTaGCACACCGGAGATGACACA +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKITLEP*HTGDDT
Trigger: TGTGTCATCTCCGGTGTGCCAGGGCTCAAGGGTGAT...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAAAGGCGCAGGGTCACGTaGCTCACCAAAGTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCERRRVT*LTKVPK
Trigger: TTTGGGCACTTTGGTGAGCCACGTGACCCTGCGCCT...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAAATCCAGGACACACTCTaGCTTCAGCAGGCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCEIQDTL*LQQAQG
Trigger: ACCCTGCGCCTGCTGAAGCCAGAGTGTGTCCTGGAT...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGGGGAGGCCCTCAGCTaGGCTTGGACAGTGAGGATC +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARGEALS*AWTVRI
Trigger: GATCCTCACTGTCCAAGCCCAGCTGAGGGCCTCCCC...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAACGCCAAGCCACACCTaGCTTCCCACTGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPTPSHT*LPTDLE
Trigger: CTCCAGATCAGTGGGAAGCCAGGTGTGGCTTGGCGT...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGGGCTGGCACAAGGGGTaGCAAGCAGCTGGCTACGGA +
Preference number: 4 (lower is better)
Translates to: FQTAFQTYTPPQTWELPEGWHKG*QAAGYG
Trigger: TCCGTAGCCAGCTGCTTGCCACCCCTTGTGCCAGCC...CTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAATCCTCCTTGATGGCTaGCACAAGGGGTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQILLDG*HKGWQA
Trigger: TGCTTGCCACCCCTTGTGCCAGCCATCAAGGAGGAT...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACTGACCCAGCTTTaGTCCGCCACGATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNPLTQL*SATIPP
Trigger: AGGAGGAATCGTGGCGGACCAAAGCTGGGTCAGTGG...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCTCCTGGAAGGCTCTCTaGACAATGGGCATGATGAGG +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALSWKAL*TMGMMR
Trigger: CCTCATCATGCCCATTGTCCAGAGAGCCTTCCAGGA...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCAGGCCTTGCTCTAGCTaGGGCAGCAGCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAARPCSS*GSSRAM
Trigger: CATCGCCCTGCTGCTGCCCCAGCTAGAGCAAGGCCT...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAGGAGCCCAAAGAGAGTaGGTAGGATCTCACGCAAGG +
Preference number: 4 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQGAQRE*VGSHAR
Trigger: CCTTGCGTGAGATCCTACCCACTCTCTTTGGGCTCC...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAAGTGGCGTTGTCAGCTTaGGCACAAGGTAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCEVALSA*AQGRAA
Trigger: TGCTGCCCTACCTTGTGCCCAAGCTGACAACGCCAC...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATATCACAGCCTGACAATTaGCCATCTCCAGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDISQPDN*PSPAAH
Trigger: ATGAGCAGCTGGAGATGGCCAATTGTCAGGCTGTGA...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAGGCTCCGCAGGTGGCTaGTGTAGTCAGCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: KRLVAPALKPELKHRRRGGSAGG*CSQPLS
Trigger: GCTCAAAGGCTGACTACACCAGCCACCTGCGGAGCC...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACAAAGTGGTCTGCAGCTaGGGCAGGAAGGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNKVVCS*GRKGFR
Trigger: CCTGAAGCCCTTCCTGCCCCAGCTGCAGACCACTTT...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAATGGGCTTGATGGCCTaGGGGTCCAGGGGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARMGLMA*GSRGGS
Trigger: ACTGCCTCCCCTGGACCCCCAGGCCATCAAGCCCAT...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTCCAGACACACCACACTaGGCAGAGATCCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPAPDTPH*AEIHRL
Trigger: CAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR CAA 72 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTaGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKR*VAPALKPELKH
Trigger: GTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCACCATGGCATACTGGCTaGGGTCAAGCGTCACTGATG +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPPWHTG*GQASLM
Trigger: CATCAGTGACGCTTGACCTCAGCCAGTATGCCATGG...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACATCCCATTCAGGACCTaGCTGGAAGGTCCAGACACC +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNIPFRT*LEGPDT
Trigger: GGTGTCTGGACCTTCCAGTCAGGTCCTGAATGGGAT...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTCCAGAGAGCCAGGACTaGGACAGCGTGTACCAAGGT +
Preference number: 4 (lower is better)
Translates to: SNSLSNLYPSPDLGTARAPESQD*DSVYQG
Trigger: ACCTTGGTACACGCTGTCTCAGTCCTGGCTCTCTGG...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCATCCTGGGAATGATCTaGTCCAGGTGCCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALILGMI*SRCLVI
Trigger: TATCACCAGGCACCTGGATCAGATCATTCCCAGGAT...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTACTGGGAGAGCTTGTTaGGGGCCAACGCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCTGRAC*GPTPSH
Trigger: GTGGCTTGGCGTTGGCCCTCAACAAGCTCTCCCAGT...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCAGATCCCCAAGGAGCTaGACAGAGCTGAACCTGATT +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLRSPRS*TELNLI
Trigger: AATCAGGTTCAGCTCTGTTCAGCTCCTTGGGGATCT...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAAGAGAGGATCACAGCCTaGCAATTGGCCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCEERITA*QLAISS
Trigger: GCTGGAGATGGCCAATTGTCAGGCTGTGATCCTCTC...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCGGTGTAGTCAGCCTTTaGGCGGGAACAGTAGATGTT +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLGVVSL*AGTVDV
Trigger: AACATCTACTGTTCCCGCTCAAAGGCTGACTACACC...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCATGCTCAGCAGGAGTaGGACGATGTTTTTCCGGAT +
Preference number: 4 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPHAQQE*DDVFPD
Trigger: ATCCGGAAAAACATCGTCTCACTCCTGCTGAGCATG...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACTCTCCTTGTGACTCGTaGAGAACTGCACCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNSPCDS*RTAPAA
Trigger: GGCTGCTGGTGCAGTTCTGCACGAGTCACAAGGAGA...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAGTCACTGCACTGGCGTaGCAGGTTCCGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRVTALA*QVPQCQ
Trigger: CTGGCACTGCGGAACCTGGCACGCCAGTGCAGTGAC...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCGAGGCACGTAGGCCTTaGCTGCCTCAGTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAAEARRP*LPQSPL
Trigger: GAGAGGTGACTGAGGCAGGCAAGGCCTACGTGCCTC...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAATGCAGCATCTCCTTCTaGTTGCTGGTCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCECSISF*LLVSCT
Trigger: GGTGCAGCTGACCAGCAAGCAGAAGGAGATGCTGCA...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTCTGTCTAGCTGGGCCTaGAGCATCTCCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPALSSWA*SISFCL
Trigger: CAAGCAGAAGGAGATGCTGCAGGCCCAGCTAGACAG...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCCTGGTAACGTGCCACTaGTTGGGAGAGGGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAALVTCH*LGEGFG
Trigger: GCCGAAGCCCTCTCCCAAGCAGTGGCACGTTACCAG...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGACTGCCGCTGGTAACGTaGCACTGCTTGGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRLPLVT*HCLGEG
Trigger: GCCCTCTCCCAAGCAGTGGCACGTTACCAGCGGCAG...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACGTGTCCAGCAGGGTCTaGAAGCACTTCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNVSSRV*KHFWVF
Trigger: GAAGACCCAGAAGTGCTTGCAGACCCTGCTGGACAC...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGAGCACGACTCCCCCATaGCCTTCACCATGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: TRDIGKRLVAPALKPELKSTTPP*PSPWPQ
Trigger: TTGGGGCCATGGTGAAGGGCATGGGGGAGTCGTGCT...CTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAATCATCAAAGAGGCCTTaGTCTAGCTGGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCESSKRP*SSWGSS
Trigger: GCTGCTGCCCCAGCTAGAGCAAGGCCTCTTTGATGA...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGATTGGCCATCTCCAGCTaGTCATCTGGGGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: KRLVAPALKPELKHRRRGLAISS*SSGVPS
Trigger: GCTTGGGACCCCAGATGAGCAGCTGGAGATGGCCAA...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAATCGATGATGATCCGGTaGCCTGTGTCATCCTCTACG +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKSMMIR*PVSSST
Trigger: CGTAGAGGATGACACAGGGCACCGGATCATCATCGA...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAAACAAACCTCAGGGCCTaGAGCATGGTGTCCCTGACA +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCETNLRA*SMVSLT
Trigger: TGTCAGGGACACCATGCTGCAGGCCCTGAGGTTTGT...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCTCGCTGGATGGGTTCTaGAGACACTTAACGAACAGG +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLSLDGF*RHLTNR
Trigger: CCTGTTCGTTAAGTGTCTGCAGAACCCATCCAGCGA...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATACCCAGACTTGGGAACTaGCAGAGCTGTGAATCATTT +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDIPRLGN*QSCESF
Trigger: AAATGATTCACAGCTCTGGCAGTTCCCAAGTCTGGG...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCTGGCAAGAAGTGCTaGCCAAAGTCCAGACTGCAC +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNPGKKC*PKSRLH
Trigger: GTGCAGTCTGGACTTTGGCCAGCACTTCTTGCCAGG...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCGCATTCATGGAGGACTaGTTTAGGGGACTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLAFMED*FRGLCV
Trigger: CACACAGAGTCCCCTAAACCAGTCCTCCATGAATGC...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTTCAGAAGACGCAGCATaGCCACGCGAGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: SNSLSNLYPSPDLGTARASEDAA*PREAAT
Trigger: AGTTGCTGCCTCGCGTGGCCATGCTGCGTCTTCTGA...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCGCTTGGGCACAATGTTaGGTAGACAGGATGACAGCT +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALAWAQC*VDRMTA
Trigger: AGCTGTCATCCTGTCTACCCAACATTGTGCCCAAGC...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTACTTCTGGGTCTTCCTaGAGGGATCCGTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPATSGSS*RDPSGH
Trigger: ATGCCCTGACGGATCCCTCCAGGAAGACCCAGAAGT...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCTCTTCCGCGTGTCCGTaGAACGGTCCTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAASSACP*NGPGRL
Trigger: GAGCCTTCCAGGACCGTTCCACGGACACGCGGAAGA...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAGGTGTCCCTGACACCTaGGTCCTCCATGGCGCGGAT +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRGVPDT*VLHGAD
Trigger: ATCCGCGCCATGGAGGACCCAGGTGTCAGGGACACC...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCACCGCCTGTCTCGATGTaGTGTCTCATGAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPPPVSM*CLMRKP
Trigger: GGGCTTTCTCATGAGACACCACATCGAGACAGGCGG...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCGTGGAGTCGGCCTaGCTGGCCAGCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRSVESA*LASFFR
Trigger: CCTGAAGAAGCTGGCCAGCCAGGCCGACTCCACGGA...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTGGTTGGGCTCTAGGCTaGGAATGGCTGACAAGTACT +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPAGWALG*EWLTST
Trigger: AGTACTTGTCAGCCATTCTCAGCCTAGAGCCCAACC...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAATGGACAGTGAGGATCTaGAGAATCTGGGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCEWTVRI*RIWAIH
Trigger: GTGGATGGCCCAGATTCTTCAGATCCTCACTGTCCA...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTGTGACTCCTGAGATGTaGAACAGGAGATCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPAVTPEM*NRRSPR
Trigger: CCTTGGGGATCTCCTGTTTCACATCTCAGGAGTCAC...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCTGGTCATCTTCCCAGTaGCTCCTGAGATGTGAAACA +
Preference number: 4 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPWSSSQ*LLRCET
Trigger: TGTTTCACATCTCAGGAGTCACTGGGAAGATGACCA...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGGCTGGTGGACTTCATaGTCTCACTTAGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPGWWTS*SHLGQC
Trigger: GCATTGGCCTAAGTGAGATCATGAAGTCCACCAGCC...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTATCCAAGGCAAACTCTaGCACCTCCTCGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPAIQGKL*HLLVIQ
Trigger: CTGGATGACGAGGAGGTGTCAGAGTTTGCCTTGGAT...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGACGATGTGGTGTCTCATaGGAAAGCCCATGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARRCGVS*ESPCPG
Trigger: TCCGGGGCATGGGCTTTCTCATGAGACACCACATCG...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAAGTTGTGTGTGGGTTTaGTTTAAGGCTTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDISCVWV*FKALAV
Trigger: CACAGCCAAAGCCTTAAATCAAACCCACACACAACT...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATACCTATACCAGAAGACTaGAGAGAGTGTAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDIPIPED*RECRRF
Trigger: GAACCTTCTACACTCTCTGCAGTCTTCTGGTATAGG...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCCAGCAGCCCCAGCATaGCAGCATAGTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: FQTAFQTYTPPQTWELPEPAAPA*QHSSGW
Trigger: CCAACCAGAACTATGCTGGCATGCTGGGGCTGCTGG...CTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCTTGCCAGTGAGTCTATaGGGGTGGTCAAGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALLPVSL*GWSRKS
Trigger: ACTTTTCCTTGACCACCCGCATAGACTCACTGGCAA...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGATCCTCCAAGAGTCCGTaGGCCAGCTTAAAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARSSKSP*ASLKPP
Trigger: TGGGGGCTTTAAGCTGGCGCACGGACTCTTGGAGGA...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGACACGTAGGCCTTGCCTaGCTCAGTCACCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRHVGLA*LSHLSS
Trigger: GCTGGAGAGGTGACTGAGGCAGGCAAGGCCTACGTG...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGGCCAAAGTCCAGACTaGACGGCAACTAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SNSLSNLYPSPDLGTARAGQSPD*TATKDG
Trigger: CCCATCCTTAGTTGCCGTGCAGTCTGGACTTTGGCC...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTTCTGACTCCAGCAGCTaGTGCATAAGCCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPASDSSS*CISLWI
Trigger: GATCCAGAGGCTTATGCAGCAGCTGCTGGAGTCAGA...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCGTGAGCACTCAAGTTaGTCATCACAGCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNREHSS*SSQPWH
Trigger: GTGCCAAGGCTGTGATGAGCAACTTGAGTGCTCACG...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAAGGGTCCAAAAGCGATaGTTTCAGGCCAGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: KRLVAPALKPELKHRRRGRVQKR*FQARRH
Trigger: GTGACGCCTGGCCTGAAAGCATCGCTTTTGGACCCT...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCATCTTATCTGCACACGTaGTGGCCAGGAAACCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPSYLHT*WPGNPA
Trigger: TGCTGGGTTTCCTGGCCAGCACGTGTGCAGATAAGA...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGTTGGTGAAAGTGGTCTaGAGCTGGGGCAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: FQTAFQTYTPPQTWELPELVKVV*SWGRKG
Trigger: GCCCTTCCTGCCCCAGCTGCAGACCACTTTCACCAA...CTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAAAACAGCTCCTGGGCTaGCATTTGCTGAGGCGCATG +
Preference number: 4 (lower is better)
Translates to: KRLVAPALKPELKHRRRGKQLLG*HLLRRM
Trigger: CATGCGCCTCAGCAAATGGCAGCCCAGGAGCTGTTT...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAAAGCCACTGCTCTTACTaGGAACACCTGCTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCESHCSY*EHLLWS
Trigger: GCTCCAAAGCAGGTGTTCCCAGTAAGAGCAGTGGCT...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAATGTCCATGGCATACTaGCTGAGGTCAAGCGTCACT +
Preference number: 4 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQMSMAY*LRSSVT
Trigger: AGTGACGCTTGACCTCAGCCAGTATGCCATGGACAT...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACTGGTCAGGGATTCCATaGCCGAAGAGTCACTGCACT +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNWSGIP*PKSHCT
Trigger: AGTGCAGTGACTCTTCGGCCATGGAATCCCTGACCA...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCGCAACTAAGGATGGGTaGTGGGAGATGATCAGCATT +
Preference number: 4 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPATKDG*WEMISI
Trigger: AATGCTGATCATCTCCCACCACCCATCCTTAGTTGC...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAAGCCCATGGCATTCATaGAGGACTGGTTTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPSPWHS*RTGLGD
Trigger: GTCCCCTAAACCAGTCCTCCATGAATGCCATGGGCT...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTACCGACAGCTCTTCCTaGCACCAGGACTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: SNSLSNLYPSPDLGTARATDSSS*HQDLSR
Trigger: CCTGGATAAGTCCTGGTGCCAGGAAGAGCTGTCGGT...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGGCTGGCAATACCATGTaGAGTTCCATCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: FQTAFQTYTPPQTWELPEAGNTM*SSISPR
Trigger: CCGGGGGCTGATGGAACTCCACATGGTATTGCCAGC...CTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAATCAGTATCAGGTGCTaGCAATACCATGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDIISIRC*QYHVEF
Trigger: GAACTCCACATGGTATTGCCAGCACCTGATACTGAT...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCGAACTCCTCGAATACTaGCAACAGCGAGTTGACGTT +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLELLEY*QQRVDV
Trigger: AACGTCAACTCGCTGTTGCCAGTATTCGAGGAGTTC...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAAAAGTTTCCCCAGCATaGTGCAGAGCATCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQKVSPA*CRASRR
Trigger: CCTTCGAGATGCTCTGCACCATGCTGGGGAAACTTT...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCCTCACGCACATACTaGTTTCCATCCCCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: VPHSGYRKKVGSASSQTRASRTY*FPSPKH
Trigger: GTGCTTTGGGGATGGAAACCAGTATGTGCGTGAGGC...TCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGGCATCCAGGAGGACTaGAGCAATGGCCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARGIQED*SNGQDL
Trigger: GAGATCCTGGCCATTGCTCCAGTCCTCCTGGATGCC...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAGCAGCAGCAGGGCGATaGCTGTCTCAGCGTACATGG +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRAAAGR*LSQRTW
Trigger: CCATGTACGCTGAGACAGCCATCGCCCTGCTGCTGC...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCCTGGTGGCCGATGGTaGAATGCAGCTGCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: FQTAFQTYTPPQTWELPEPGGRW*NAAARK
Trigger: CTTTCGAGCAGCTGCATTCCACCATCGGCCACCAGG...CTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp GTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGACTCCAGCTGCTCATCTaGGGTCCCAAGCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: VPHSGYRKKVGSASSQTRLQLLI*GPKLFL
Trigger: AAGGAAAAGCTTGGGACCCCAGATGAGCAGCTGGAG...TCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAATCAATGAGTGCCAACTaGTTGCCAGCATCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKSMSAN*LPASSF
Trigger: GAAGCTGGATGCTGGCAACCAGTTGGCACTCATTGA...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTTCAGCACCTCCAAACTaGCCACATCCAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPASAPPN*PHPGSW
Trigger: CCAAGATCCTGGATGTGGCCAGTTTGGAGGTGCTGA...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGACGGCAATGCTGCTGCTaGCCCAGGCCTCTCATGTCA +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRRQCCC*PRPLMS
Trigger: TGACATGAGAGGCCTGGGCCAGCAGCAGCATTGCCG...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
3UTR CAA 72 bp CATGCTAAACTGGACAAACAGCTCCTGGGCTGCCATTaGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: HAKLDKQLLGCH*LRRMRVLFLLF
Trigger: GAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGGTCAAGCGTCACTaGTGCCAGCAGACTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPEVKRH*CQQTRN
Trigger: ATTTCTAGTCTGCTGGCATCAGTGACGCTTGACCTC...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAGACGCTCCCAATCCCTaGGAGGACGCTCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRDAPNP*EDAHLL
Trigger: CAGAAGATGAGCGTCCTCTCAGGGATTGGGAGCGTC...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp ACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGTGGTCATCCTGGGAATaGTCTGATCCAGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TRDIGKRLVAPALKPELKWSSWE*SDPGAW
Trigger: CCAGGCACCTGGATCAGATCATTCCCAGGATGACCA...CTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp ACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTCCTCCTTGTCAAACTTaGCCACCCAGAGTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: TILKSQARHTTLGRDPPSPPCQT*PPRVSA
Trigger: TGCGGAGACTCTGGGTGGTCAAGTTTGACAAGGAGG...AGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp ACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTACGTTCTCCTTCCCATaGGTGTTGAGCGTTGCGAGG +
Preference number: 4 (lower is better)
Translates to: TILKSQARHTTLGRDPPSTFSFP*VLSVAR
Trigger: CCTCGCAACGCTCAACACTCATGGGAAGGAGAACGT...AGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGACTCTCATCGCTCTTCTaGGACCTCAGGCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARLSSLF*DLRPSS
Trigger: TGAGGAAGGCCTGAGGTCTCAGAAGAGCGATGAGAG...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAGGCCCTGCGGGAGGCTaGATCTCTATATCGATGCAG +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRGPAGG*ISISMQ
Trigger: CTGCATCGATATAGAGATGCAGCCTCCCGCAGGGCC...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCATCAACTGCCAGAAACTaGTCAGTTTGGCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPSTARN*SVWPQP
Trigger: AGGCTGAGGCCAAACTGAGCAGTTTCTGGCAGTTGA...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGACATCCTGGCAAGAAGTaGTGGCCAAAGTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: KRLVAPALKPELKHRRRGHPGKK*WPKSRL
Trigger: CAGTCTGGACTTTGGCCAGCACTTCTTGCCAGGATG...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGGGCTGCATCCAACATaGACTTCCGGACATCTGGGT +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARGLHPT*TSGHLG
Trigger: ACCCAGATGTCCGGAAGTGCATGTTGGATGCAGCCC...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAGATGGCATCAGTCAGTaGCGCCATCATCTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: KRLVAPALKPELKHRRRGDGISQ*RHHLLL
Trigger: CAACAGGAGATGATGGCGGCACTGACTGATGCCATC...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAACAATCTTCCAGACATaGAGGGACGCCTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRTIFQT*RDACRT
Trigger: GGTGCGGCAGGCGTCCCTGCATGTCTGGAAGATTGT...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGACTCGAAAGTCTTGGCTaGCGCCTCTCTGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRLESLG*RLSDLL
Trigger: GAGGAGGTCAGAGAGGCGGCAGCCAAGACTTTCGAG...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTTGGCCGATGGTGGAATaGAGCTGCTCGAAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SNSLSNLYPSPDLGTARAWPMVE*SCSKVL
Trigger: CAAGACTTTCGAGCAGCTGCATTCCACCATCGGCCA...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTATCCACTTTGGCCCCTaGTCCCTGAATCACAAACCT +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPAIHFGP*SLNHKP
Trigger: AGGTTTGTGATTCAGGGAGCAGGGGCCAAAGTGGAT...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCCATCGTGTCCCAGCATaGTCAGCAGGAGTGAGACGA +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAAHRVPA*SAGVRR
Trigger: TCGTCTCACTCCTGCTGAGCATGCTGGGACACGATG...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGAGGAGGTTGACAATTaGCTGGTCGCTGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TILKSQARHTTLGRDPPSEEVDN*LVAVGP
Trigger: AGGGCCTACAGCGACCAGGCAATTGTCAACCTCCTC...AGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCGAGATCCACCGTCTGTaGCCCACTCGGGATATAGGA +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAAEIHRL*PTRDIG
Trigger: TCCTATATCCCGAGTGGGGCACAGACGGTGGATCTC...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCATCCGTTCCTTTACACTaGCTGTTGTCACCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPSVPLH*LLSPSL
Trigger: CAGGGAAGGTGACAACAGCCAGTGTAAAGGAACGGA...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAATGGGAACACCTGCTTTaGAGCCTATACCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKWEHLL*SLYQKT
Trigger: AGTCTTCTGGTATAGGCTCCAAAGCAGGTGTTCCCA...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTTCAGGCGGGGACTGTTaGATTTCAGGTGACCAGCCA +
Preference number: 4 (lower is better)
Translates to: TILKSQARHTTLGRDPPSSGGDC*ISGDQP
Trigger: TGGCTGGTCACCTGAAATCCAACAGTCCCCGCCTGA...AGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACAGAAACTGCTCAGTTTaGCCTCAGCCTGTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNRNCSV*PQPVSQ
Trigger: CTGACTCACAGGCTGAGGCCAAACTGAGCAGTTTCT...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTTCTTGTCCAGGTGCTTaGCCAGAGAGCCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCSCPGA*PESPSG
Trigger: TCCTGATGGGCTCTCTGGCCAAGCACCTGGACAAGA...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGATGAGGGCCAGGGATaGGGCATCAATGAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARDEGQG*GINEVD
Trigger: GTCCACTTCATTGATGCCCCATCCCTGGCCCTCATC...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCTATCTGCACACGTGCTaGCCAGGAAACCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAAYLHTC*PGNPAG
Trigger: TCCTGCTGGGTTTCCTGGCCAGCACGTGTGCAGATA...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTAAGCCTTCCTTGCCGTaGGCACGAGGGATTCAGAGA +
Preference number: 4 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCKPSLP*ARGIQR
Trigger: TCTCTGAATCCCTCGTGCCCACGGCAAGGAAGGCTT...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAGCAACACTGGAAGGATaGAGGTCACTCCCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: KRLVAPALKPELKHRRRGATLEG*RSLPSS
Trigger: CGAAGAAGGGAGTGACCTCCATCCTTCCAGTGTTGC...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAACCTGATGTCGCTGGATaGGTTCTGCAGACACTTAAC +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCEPDVAG*VLQTLN
Trigger: GTTAAGTGTCTGCAGAACCCATCCAGCGACATCAGG...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTCTAGCCATGCTAAACTaGACAAACAGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPALAMLN*TNSSWA
Trigger: AGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAG...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAAGCTGGGCACTCTGAATaGTGGATTTGTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCEAGHSE*WICHTA
Trigger: AGCTGTATGACAAATCCATCATTCAGAGTGCCCAGC...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAAATCTGGAGGAGATTCTaGAATAACTCGTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKIWRRF*NNSSQS
Trigger: GCTTTGGGACGAGTTATTTCAGAATCTCCTCCAGAT...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGACACCTGGCTTCCCACTaGTCTGGAGGAGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARHLASH*SGGDSE
Trigger: TTCAGAATCTCCTCCAGATCAGTGGGAAGCCAGGTG...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTAGATGGGGCAGCACGTaGACCACATACGGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCRWGST*TTYGSK
Trigger: TTTTGAGCCGTATGTGGTTCACGTGCTGCCCCATCT...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp ACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGTGTGCAGCTCTTCAATaGGTGCCAACTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TRDIGKRLVAPALKPELKCAALQ*VPTGCQ
Trigger: CTGGCAACCAGTTGGCACTCATTGAAGAGCTGCACA...CTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp ACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGATCTTGGAGAGGGACTaGAACACCTCTTCACCCTGC +
Preference number: 4 (lower is better)
Translates to: TRDIGKRLVAPALKPELKILERD*NTSSPC
Trigger: GCAGGGTGAAGAGGTGTTTCAGTCCCTCTCCAAGAT...CTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTCTTACTGGGAACACCTaGTTTGGAGCCTATACCAGA +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPALTGNT*FGAYTR
Trigger: TCTGGTATAGGCTCCAAAGCAGGTGTTCCCAGTAAG...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGATAGCAAATAGGTaGTTGGTCAGGGATTCCATG +
Preference number: 4 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKRIANR*LVRDSM
Trigger: CATGGAATCCCTGACCAAGCACCTATTTGCTATCCT...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCTCATCCACAATCAACTaGCAGAAACTGCTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLSSTIN*QKLLSL
Trigger: CAAACTGAGCAGTTTCTGGCAGTTGATTGTGGATGA...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTTCTCACTTAGGCCAATaGACACACCCTGCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: SNSLSNLYPSPDLGTARASHLGQ*THPASH
Trigger: ATGAGAGGCAGGGTGTGTGCATTGGCCTAAGTGAGA...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGACAGTGGGTCCTTATTTaGCCACCAGATCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: VPHSGYRKKVGSASSQTRQWVLI*PPDHLL
Trigger: GAGAAGATGATCTGGTGGGCAAATAAGGACCCACTG...TCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTAACACCTCTTCACCCTaGCGCATCTTGAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCNTSSP*RILRRL
Trigger: CAACCTCCTCAAGATGCGGCAGGGTGAAGAGGTGTT...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGACATTCAGGACCTGACTaGAAGGTCCAGACACCACGT +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARHSGPD*KVQTPR
Trigger: ACGTGGTGTCTGGACCTTCCAGTCAGGTCCTGAATG...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTGTGAGTCTATGCGGGTaGTCAAGGAAAAGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPAVSLCG*SRKSLS
Trigger: AGAGAGACTTTTCCTTGACCACCCGCATAGACTCAC...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGACATAGCTGGCATCATTaGGCGCGTTCTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: KRLVAPALKPELKHRRRGHSWHH*ARSSGT
Trigger: AGTTCCTGAAGAACGCGCCCAATGATGCCAGCTATG...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGTGCTGCATAAGCCTCTaGATCATCCCTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: FQTAFQTYTPPQTWELPECCISL*IIPPAS
Trigger: GGATGCTGGAGGGATGATCCAGAGGCTTATGCAGCA...CTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCTGCTCATCACAGCCTTaGCACAGTCATCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAACSSQP*HSHLQP
Trigger: AGGCTGCAGATGACTGTGCCAAGGCTGTGATGAGCA...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCTTCTGGACTTTGACATaGGAGTCGGTCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAAFWTLT*ESVSTS
Trigger: GGAGGTGCTGACCGACTCCCATGTCAAAGTCCAGAA...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGTGCTGTCCAGCCTTCTaGACTTTGACATGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: FQTAFQTYTPPQTWELPECCPAF*TLTWES
Trigger: CGACTCCCATGTCAAAGTCCAGAAGGCTGGACAGCA...CTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAGTCTGCAAGCACTTCTaGGTCTTCCTGGAGGGATCC +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRVCKHF*VFLEGS
Trigger: GGATCCCTCCAGGAAGACCCAGAAGTGCTTGCAGAC...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAATCGCCTTGTTGGACTaGGCAGTTCCAAAGTTATCA +
Preference number: 4 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQIALLD*AVPKLS
Trigger: TGATAACTTTGGAACTGCCCAGTCCAACAAGGCGAT...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTTCTGACCTCCTCCAGTaGGTCACACAAAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCSDLLQ*VTQSLP
Trigger: AGGAAGGCTTTGTGTGACCCACTGGAGGAGGTCAGA...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAGGATCCTGTCCGCCGTaGCACTGCTCAGGATCATTT +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRGSCPP*HCSGSF
Trigger: AAATGATCCTGAGCAGTGCCACGGCGGACAGGATCC...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTCCACATCCAGGATCTTaGAGAGGGACTGAAACACCT +
Preference number: 4 (lower is better)
Translates to: SNSLSNLYPSPDLGTARAPHPGS*RGTETP
Trigger: AGGTGTTTCAGTCCCTCTCCAAGATCCTGGATGTGG...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp ACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGACACAGGGCATCCTCTaGAGCCATGACCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: TRDIGKRLVAPALKPELKTQGIL*SHDQEF
Trigger: AAATTCCTGGTCATGGCTTCAGAGGATGCCCTGTGT...CTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTAAGAGTGGCTTCACCTaGGAGCTGTCCAAATACTGG +
Preference number: 4 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCKSGFT*ELSKYW
Trigger: CCAGTATTTGGACAGCTCTCAGGTGAAGCCACTCTT...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCGAGGAACCCACAGTCTaGCCCTGCTATTATAGTTCC +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAAEEPTV*PCYYSS
Trigger: GGAACTATAATAGCAGGGTCAGACTGTGGGTTCCTC...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAGCAGAGCCCCTTCACTaGTCCCTCTGGAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRAEPLH*SLWKIF
Trigger: AAAGATCTTCCAGAGGGAGCAGTGAAGGGGCTCTGC...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCGCATCTCTATATCGATaGAGAGTCAAGCAGAACAAT +
Preference number: 4 (lower is better)
Translates to: APGLPFAEAHACAFPSLLASLYR*RVKQNN
Trigger: ATTGTTCTGCTTGACTCTGCATCGATATAGAGATGC...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTCTCATCAGTATCAGGTaGTGGCAATACCATGTGGAG +
Preference number: 4 (lower is better)
Translates to: SNSLSNLYPSPDLGTARALISIR*WQYHVE
Trigger: CTCCACATGGTATTGCCAGCACCTGATACTGATGAG...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAATCTCGGACATGGGGTaGAATGTCCACTTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRISDMG*NVHFAG
Trigger: GCCAGCAAAGTGGACATTGCACCCCATGTCCGAGAT...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTAGCCGGATTTCCTTGTaGAGCTCTTCAATGAGTGCC +
Preference number: 4 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCSRISL*SSSMSA
Trigger: GGCACTCATTGAAGAGCTGCACAAGGAAATCCGGCT...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGACATCACTGCTATATCTaGCGGCACAAAGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARHHCYI*RHKVCQ
Trigger: CTGGCAGACTTTGTGCCGGCAGATATAGCAGTGATG...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACTCCTTAAATTCTGAGTaGGACAGGTATCGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNSLNSE*DRYRSR
Trigger: TCTGCTCCGATACCTGTCCCACTCAGAATTTAAGGA...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAAGTAAGGACTTCTGTATaGTGGGCAGTATCAGATCCT +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCEVRTSV*WAVSDP
Trigger: AGGATCTGATACTGCCCACCATACAGAAGTCCTTAC...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACTAAGGATGGGTGGTaGGAGATGATCAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: KRLVAPALKPELKHRRRGTKDGW*EMISIS
Trigger: GGAAATGCTGATCATCTCCCACCACCCATCCTTAGT...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAGAACTTTGTTGCCAGTaGGTCTATGCGGGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRELCCQ*VYAGGQ
Trigger: TTGACCACCCGCATAGACTCACTGGCAACAAAGTTC...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTAAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTACCCAAGAAGCTCCACTaGCCCAGCTTTGGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: LKYFLGTPSSKLPIGTNVPKKLH*PSFGPP
Trigger: TGGCGGACCAAAGCTGGGTCAGTGGAGCTTCTTGGG...TACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTATTAGTGTCTCGGAAACCTaGGTGTCCGCCGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: KILSGNAIFQAPHWNKCISVSET*VSAAIL
Trigger: CAGGATGGCGGCGGACACGCAGGTTTCCGAGACACT...AATACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGTCAAGCAGAACAATTTaGAGAGCCCCTTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: TRDIGKRLVAPALKPELKSSRTI*RAPSLL
Trigger: GAGCAGTGAAGGGGCTCTGCAAATTGTTCTGCTTGA...CTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGAGTCTCTCTGTCAGATaGAACACAGTACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: TRDIGKRLVAPALKPELKSLSVR*NTVHRA
Trigger: TGCCCTGTGTACTGTGTTGCATCTGACAGAGAGACT...CTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTTCCCAATGTTCTCGCTaGAATCGTTCTCTTATCTGC +
Preference number: 4 (lower is better)
Translates to: SNSLSNLYPSPDLGTARASQCSR*NRSLIC
Trigger: GCAGATAAGAGAACGATTGCAGCGAGAACATTGGGA...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAATCCTCGTCATCCAGCTaGTTTAGTAAAAATGGGAGA +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCESSSSS*FSKNGR
Trigger: TCTCCCATTTTTACTAAAGCAGCTGGATGACGAGGA...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAAAGGACGCTCATCTTCTaGGCTACAACAGTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCERTLIF*ATTVSF
Trigger: AAAACTAACTGTTGTAGCCCAGAAGATGAGCGTCCT...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGACAATGGGCTTCACTTTaGGGTCACTCTTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRQWASL*GHSCPG
Trigger: ACCTGGACAAGAGTGACCCCAAAGTGAAGCCCATTG...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAATGTTGCCAATAATCTaGGCTGCCATCTTCCGCGTG +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRMLPII*AAIFRV
Trigger: CACGCGGAAGATGGCAGCCCAGATTATTGGCAACAT...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTCAGACCTCACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGAACTTCCCAAGTTCACTaGGGATTTCTCTCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: FRPHNIEKPSQTHHTGQRTSQVH*GFLSVP
Trigger: AGGAACGGAGAGAAATCCTCAGTGAACTTGGGAAGT...TCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTCAGACCTCACAATATTaGAAAGCCAAGCCAGACACA +
Preference number: 4 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCQTSQY*KAKPDT
Trigger: TGTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTG...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTAAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTACGCTCTTGTGCTGACTaGCCACGTCCATCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LKYFLGTPSSKLPIGTNVRSCAD*PRPSPC
Trigger: ACAAGGAGATGGACGTGGTCAGTCAGCACAAGAGCG...TACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTAAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTAGCCCGGTGGTACTGCTaGACTTTGTTGCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: LKYFLGTPSSKLPIGTNVARWYC*TLLPVS
Trigger: ACTCACTGGCAACAAAGTTCAGCAGTACCACCGGGC...TACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp AAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTATTACACAAAGCCTTCCTTaGCGTGGGCACGAGGGATTC +
Preference number: 4 (lower is better)
Translates to: KILSGNAIFQAPHWNKCITQSLP*RGHEGF
Trigger: GAATCCCTCGTGCCCACGGCAAGGAAGGCTTTGTGT...AATACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCTTAATAGCCATGACTTaGTTCAGACCATCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAALIAMT*FRPSKA
Trigger: TGCCTTGGATGGTCTGAAGCAAGTCATGGCTATTAA...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp ACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGAAGTTCTTCTTATCTTaGATGGCATCAGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TRDIGKRLVAPALKPELKKFFLS*MASVSA
Trigger: GGCACTGACTGATGCCATCCAAGATAAGAAGAACTT...CTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTAAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTAGGTACTTCGGAGGCTTaGCTTTGCTCATCAGGATGT +
Preference number: 4 (lower is better)
Translates to: LKYFLGTPSSKLPIGTNVGTSEA*LCSSGC
Trigger: ACATCCTGATGAGCAAAGTCAAGCCTCCGAAGTACC...TACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp TTAAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTACTTCCCAGTGACTCCTaGGATGTGAAACAGGAGATC +
Preference number: 4 (lower is better)
Translates to: LKYFLGTPSSKLPIGTNVLPSDS*DVKQEI
Trigger: GATCTCCTGTTTCACATCTCAGGAGTCACTGGGAAG...TACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR TCA 90 bp AAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTATTCAGATCCTTAAATTCTaGGTGGGACAGGTATCGGAG +
Preference number: 4 (lower is better)
Translates to: KILSGNAIFQAPHWNKCIQILKF*VGQVSE
Trigger: CTCCGATACCTGTCCCACTCAGAATTTAAGGATCTG...AATACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp TTAAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTATGTCTCCTTGTCGCTTaGCTCTCGATGGAAAGACAA +
Preference number: 4 (lower is better)
Translates to: LKYFLGTPSSKLPIGTNVCLLVA*LSMERQ
Trigger: TTGTCTTTCCATCGAGAGCCAAGCGACAAGGAGACA...TACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CCA 90 bp AAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTATTTCTTCTTATCTTGGATaGCATCAGTCAGTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: KILSGNAIFQAPHWNKCISSYLG*HQSVPP
Trigger: TGGCGGCACTGACTGATGCCATCCAAGATAAGAAGA...AATACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR GCA 90 bp TTAAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTATTTCCTGAACATCACTaGTATATCTGCCGGCACAAA +
Preference number: 4 (lower is better)
Translates to: LKYFLGTPSSKLPIGTNVFPEHH*YICRHK
Trigger: TTTGTGCCGGCAGATATAGCAGTGATGTTCAGGAAA...TACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GAGCCTGCCCATAACCTCCGCCGCCTGCCGCTGGTAACGTGCCACTaGTTGGGAGAGGGCTTCGGCCCCTGCCTGCCTTACAGCCGCCTC +
Preference number: 5 (lower is better)
Translates to: EPAHNLRRLPLVTCH*LGEGFGPCLPYSRL
Trigger: GAGGCGGCTGTAAGGCAGGCAGGGGCCGAAGCCCTCTCCCAAGCAGTGGCACGTTACCAGCGGCAGGCGGCGGAGGTTATGGGCAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548132.1
CDS TCA 90 bp CTTCCAGACATGCAGGGACGCCTGCCGCACCACCAGCTGGGTGTCTaGGCGGCCCATGTACAGCCCTGCCAACACCCGGTTCCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: LPDMQGRLPHHQLGV*AAHVQPCQHPVPPL
Trigger: GAGCGGCGGAACCGGGTGTTGGCAGGGCTGTACATGGGCCGCTCAGACACCCAGCTGGTGGTGCGGCAGGCGTCCCTGCATGTCTGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp CCCCAAGAGAGGACAGCAGCTTCCGAACTGTCTGCTGAGCCTGCCTaGGGACGTGCCAGGTGCGGCTCAGGAGCACCGCCACCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: PQERTAASELSAEPA*GRARCGSGAPPPEP
Trigger: GGGCTCTGGTGGCGGTGCTCCTGAGCCGCACCTGGCACGTCCGCAGGCAGGCTCAGCAGACAGTTCGGAAGCTGCTGTCCTCTCTTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp AGCGAGGCGAGCCCGTCCCGATCACCCAAGTCAGAAGACGCAGCATaGCCACGCGAGGCAGCAACTCCGGGCCATTCTCGTCCACCCGCC +
Preference number: 5 (lower is better)
Translates to: SEASPSRSPKSEDAA*PREAATPGHSRPPA
Trigger: GGCGGGTGGACGAGAATGGCCCGGAGTTGCTGCCTCGCGTGGCCATGCTGCGTCTTCTGACTTGGGTGATCGGGACGGGCTCGCCTCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GCAGCTTCCGAACTGTCTGCTGAGCCTGCCTGCGGACGTGCCAGGTaGGGCTCAGGAGCACCGCCACCAGAGCCCGGTGGTACTGCTGAA +
Preference number: 5 (lower is better)
Translates to: AASELSAEPACGRAR*GSGAPPPEPGGTAE
Trigger: TTCAGCAGTACCACCGGGCTCTGGTGGCGGTGCTCCTGAGCCGCACCTGGCACGTCCGCAGGCAGGCTCAGCAGACAGTTCGGAAGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp CTCCATGAGCCTGCCCATAACCTCCGCCGCCTGCCGCTGGTAACGTaGCACTGCTTGGGAGAGGGCTTCGGCCCCTGCCTGCCTTACAGC +
Preference number: 5 (lower is better)
Translates to: LHEPAHNLRRLPLVT*HCLGEGFGPCLPYS
Trigger: GCTGTAAGGCAGGCAGGGGCCGAAGCCCTCTCCCAAGCAGTGGCACGTTACCAGCGGCAGGCGGCGGAGGTTATGGGCAGGCTCATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548132.1
CDS CCA 90 bp CAGTGCAGGGTTCTGCACGGAGGCAGTGATGGTGCTGATGAGCTGTaGGAGGACCCGGTCCGGCGACAGGACGGAAAGGGAGCCCATGGC +
Preference number: 5 (lower is better)
Translates to: QCRVLHGGSDGADEL*EDPVRRQDGKGAHG
Trigger: GCCATGGGCTCCCTTTCCGTCCTGTCGCCGGACCGGGTCCTCCCACAGCTCATCAGCACCATCACTGCCTCCGTGCAGAACCCTGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000550471.1
CDS GCA 90 bp CATCAGTCAGTGCCGCCATCATCTCCTGTTGCTTCAGCGAGAGGATaGCCAGGCCCTTCACCAGGCCCGCCAGGCCATAGGCGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: HQSVPPSSPVASARG*PGPSPGPPGHRRPL
Trigger: AAGGGGCCGCCTATGGCCTGGCGGGCCTGGTGAAGGGCCTGGGCATCCTCTCGCTGAAGCAACAGGAGATGATGGCGGCACTGACTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp CTGCTGCTGGCCCAGGCCTCTCATGTCAGGATGGTGTCGTCCACCTaGTCCGTGGAGTCGGCCTGGCTGGCCAGCTTCTTCAGGGACCTT +
Preference number: 5 (lower is better)
Translates to: LLLAQASHVRMVSST*SVESAWLASFFRDL
Trigger: AAGGTCCCTGAAGAAGCTGGCCAGCCAGGCCGACTCCACGGAGCAGGTGGACGACACCATCCTGACATGAGAGGCCTGGGCCAGCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp AGCGAGGCGAGCCCGTCCCGATCACCCAAGTCAGAAGACGCAGCATaGCCACGCGAGGCAGCAACTCCGGGCCATTCTAGGAGAGAACGG +
Preference number: 5 (lower is better)
Translates to: SEASPSRSPKSEDAA*PREAATPGHSRRER
Trigger: CCGTTCTCTCCTAGAATGGCCCGGAGTTGCTGCCTCGCGTGGCCATGCTGCGTCTTCTGACTTGGGTGATCGGGACGGGCTCGCCTCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551920.1
CDS-3UTR CAA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGCCAGCACCCGGGTGTaGACAGGTGGCGTTGTCAGC +
Preference number: 5 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSASTRV*TGGVVS
Trigger: GCTGACAACGCCACCTGTCAACACCCGGGTGCTGGC...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp TTAGGGCATCCCAGCTCTCCTCCAGAACCACAGGGCTGGAGTCATTaGAGAGGCGGATCAGGCCCGAGACCAGGCTCCGCAGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: LGHPSSPPEPQGWSH*RGGSGPRPGSAGGW
Trigger: CCAGCCACCTGCGGAGCCTGGTCTCGGGCCTGATCCGCCTCTTCAATGACTCCAGCCCTGTGGTTCTGGAGGAGAGCTGGGATGCCCTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp CTGGATCATCCCTCCAGCATCCTCCTTGATGGCTGGCACAAGGGGTaGCAAGCAGCTGGCTACGGACTCCTGGACCTGCTGGGAGGGGGT +
Preference number: 5 (lower is better)
Translates to: LDHPSSILLDGWHKG*QAAGYGLLDLLGGG
Trigger: ACCCCCTCCCAGCAGGTCCAGGAGTCCGTAGCCAGCTGCTTGCCACCCCTTGTGCCAGCCATCAAGGAGGATGCTGGAGGGATGATCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp AGGCTGGAAAGTTTGGCCGGCAACTGCCCTCCGCCTGTCTCGATGTaGTGTCTCATGAGAAAGCCCATGCCCCGGACCCCGCTCACCGCA +
Preference number: 5 (lower is better)
Translates to: RLESLAGNCPPPVSM*CLMRKPMPRTPLTA
Trigger: TGCGGTGAGCGGGGTCCGGGGCATGGGCTTTCTCATGAGACACCACATCGAGACAGGCGGAGGGCAGTTGCCGGCCAAACTTTCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp AAACAGGGATGTACTGGGTCAGGCCGGACGGGTTCTTGGCCAGGATaGTGTCCAGCAGTCCAAGCGCCGCCTCCAGCTCCCCATCCAGCT +
Preference number: 5 (lower is better)
Translates to: KQGCTGSGRTGSWPG*CPAVQAPPPAPHPA
Trigger: AGCTGGATGGGGAGCTGGAGGCGGCGCTTGGACTGCTGGACATCATCCTGGCCAAGAACCCGTCCGGCCTGACCCAGTACATCCCTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS GCA 90 bp GCAGTGGCTTCTGGCTGGGCCTCAGCCAACTGCTGGATGGCTGCCTaGAAGGCCCTGCGGGAGGCTGCATCTCTATATCGATGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: AVASGWASANCWMAA*KALREAASLYRCRV
Trigger: GACTCTGCATCGATATAGAGATGCAGCCTCCCGCAGGGCCTTGCAGGCAGCCATCCAGCAGTTGGCTGAGGCCCAGCCAGAAGCCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GTGCTTGGTCAGGGATTCCATGGCCGAAGAGTCACTGCACTGGCGTaGCAGGTTCCGCAGTGCCAGCACAGCTTCATCCATCAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: VLGQGFHGRRVTALA*QVPQCQHSFIHQAG
Trigger: CCCCGCCTGATGGATGAAGCTGTGCTGGCACTGCGGAACCTGGCACGCCAGTGCAGTGACTCTTCGGCCATGGAATCCCTGACCAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp ATAATGGCAAACTCCTCCCGCGTCACCAGGCGCAGTGCAGGGTTCTaGACGGAGGCAGTGATGGTGCTGATGAGCTGTGGGAGGACCCGG +
Preference number: 5 (lower is better)
Translates to: IMANSSRVTRRSAGF*TEAVMVLMSCGRTR
Trigger: CCGGGTCCTCCCACAGCTCATCAGCACCATCACTGCCTCCGTGCAGAACCCTGCACTGCGCCTGGTGACGCGGGAGGAGTTTGCCATTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000550471.1
CDS GCA 90 bp GCACACGGGGACTGCAAGGCACAGAGCAGCACGTCCACCTCCTCCTaGTCTGCAAAGGCACAGCCATCATCACCACTGCTGCTGGCACAC +
Preference number: 5 (lower is better)
Translates to: AHGDCKAQSSTSTSS*SAKAQPSSPLLLAH
Trigger: GTGTGCCAGCAGCAGTGGTGATGATGGCTGTGCCTTTGCAGAGCAGGAGGAGGTGGACGTGCTGCTCTGTGCCTTGCAGTCCCCGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000551920.1
CDS GCA 90 bp GGGAGAATGTCCTCCAGAGCCTGGTGGCCGATGGTGGAATGCAGCTaGTCGAAAGTCTTGGCTGCCGCCTCTCTGACCTCCTCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GRMSSRAWWPMVECS*SKVLAAASLTSSSG
Trigger: CCCACTGGAGGAGGTCAGAGAGGCGGCAGCCAAGACTTTCGAGCAGCTGCATTCCACCATCGGCCACCAGGCTCTGGAGGACATTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS CCA 90 bp ACAACAATCTTCCAGACATGCAGGGACGCCTGCCGCACCACCAGCTaGGTGTCTGAGCGGCCCATGTACAGCCCTGCCAACACCCGGTTC +
Preference number: 5 (lower is better)
Translates to: TTIFQTCRDACRTTS*VSERPMYSPANTRF
Trigger: GAACCGGGTGTTGGCAGGGCTGTACATGGGCCGCTCAGACACCCAGCTGGTGGTGCGGCAGGCGTCCCTGCATGTCTGGAAGATTGTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp GCTGTGGGAGGACCCGGTCCGGCGACAGGACGGAAAGGGAGCCCATaGCATTCATGGAGGACTGCCAGACAAACGCAGACATGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: AVGGPGPATGRKGSP*HSWRTARQTQTWSV
Trigger: CACTGACCATGTCTGCGTTTGTCTGGCAGTCCTCCATGAATGCCATGGGCTCCCTTTCCGTCCTGTCGCCGGACCGGGTCCTCCCACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS-3UTR CAA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCCCATCCACGGCGTGCTaGTGGGAGCCACCCAGCACC +
Preference number: 5 (lower is better)
Translates to: APGLPFAEAHACAFPSLLPSTAC*WEPPST
Trigger: GGTGCTGGGTGGCTCCCACAAGCACGCCGTGGATGG...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGACAAGAAGGGGTTCTaGATCCTGGGAGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRDKKGF*ILGAAR
Trigger: CCTGGCTGCTCCCAGGATCAAGAACCCCTTCTTGTC...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGACGCCCGGGTGGGGTGTaGGGGGAGGCCCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: KRLVAPALKPELKHRRRGRPGGV*GEALSW
Trigger: CCAGCTGAGGGCCTCCCCCAACACCCCACCCGGGCG...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp CTTAGCAGTGGCTTCTGGCTGGGCCTCAGCCAACTGCTGGATGGCTaGCTGCAAGGCCCTGCGGGAGGCTGCATCTCTATATCGATGCAG +
Preference number: 5 (lower is better)
Translates to: LSSGFWLGLSQLLDG*LQGPAGGCISISMQ
Trigger: CTGCATCGATATAGAGATGCAGCCTCCCGCAGGGCCTTGCAGGCAGCCATCCAGCAGTTGGCTGAGGCCCAGCCAGAAGCCACTGCTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp AGGGGTCTGCATAATGGCAAACTCCTCCCGCGTCACCAGGCGCAGTaGAGGGTTCTGCACGGAGGCAGTGATGGTGCTGATGAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RGLHNGKLLPRHQAQ*RVLHGGSDGADELW
Trigger: CCACAGCTCATCAGCACCATCACTGCCTCCGTGCAGAACCCTGCACTGCGCCTGGTGACGCGGGAGGAGTTTGCCATTATGCAGACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000550471.1
CDS GCA 90 bp CTGCCGCTGGTAACGTGCCACTGCTTGGGAGAGGGCTTCGGCCCCTaGCTGCCTTACAGCCGCCTCATGATAGATCACGTCGTCAATCAG +
Preference number: 5 (lower is better)
Translates to: LPLVTCHCLGEGFGP*LPYSRLMIDHVVNQ
Trigger: CTGATTGACGACGTGATCTATCATGAGGCGGCTGTAAGGCAGGCAGGGGCCGAAGCCCTCTCCCAAGCAGTGGCACGTTACCAGCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548132.1
CDS GCA 90 bp CTTTGCAGATACGGTCCGCACCTCAGGCACAGGGTCCAAAAGCGATaGTTTCAGGCCAGGCGTCACGCTGGGCAGGTACGGAGCCAAGTC +
Preference number: 5 (lower is better)
Translates to: LCRYGPHLRHRVQKR*FQARRHAGQVRSQV
Trigger: GACTTGGCTCCGTACCTGCCCAGCGTGACGCCTGGCCTGAAAGCATCGCTTTTGGACCCTGTGCCTGAGGTGCGGACCGTATCTGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp TCTCCATCAGCCACGGCAGCAAGTCCTCAAAGCACGACTCCCCCATaGCCTTCACCATGGCCCCAAGGGCCTTTGCAGATACGGTCCGCA +
Preference number: 5 (lower is better)
Translates to: SPSATAASPQSTTPP*PSPWPQGPLQIRSA
Trigger: TGCGGACCGTATCTGCAAAGGCCCTTGGGGCCATGGTGAAGGGCATGGGGGAGTCGTGCTTTGAGGACTTGCTGCCGTGGCTGATGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GGGCTTGATGGCCTGGGGGTCCAGGGGAGGCAGTGGGTCCTTATTTaGCCACCAGATCATCTTCTCAGCCACCAGCCTGATGTCGCTGGA +
Preference number: 5 (lower is better)
Translates to: GLDGLGVQGRQWVLI*PPDHLLSHQPDVAG
Trigger: TCCAGCGACATCAGGCTGGTGGCTGAGAAGATGATCTGGTGGGCAAATAAGGACCCACTGCCTCCCCTGGACCCCCAGGCCATCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp TTCCTGGGCCAGTTGTTCAGTGTCGGTGACATCACCCTTGAGCCCTaGCACACCGGAGATGACACACAGAGCCTCCTGCAGGACCCGTGG +
Preference number: 5 (lower is better)
Translates to: FLGQLFSVGDITLEP*HTGDDTQSLLQDPW
Trigger: CCACGGGTCCTGCAGGAGGCTCTGTGTGTCATCTCCGGTGTGCCAGGGCTCAAGGGTGATGTCACCGACACTGAACAACTGGCCCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp TGCAGCAGCATCACCGCCCTCTTCACAGCCACCGACAGCTCTTCCTaGCACCAGGACTTATCCAGGACACACTCTGGCTTCAGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: CSSITALFTATDSSS*HQDLSRTHSGFSRR
Trigger: GCGCCTGCTGAAGCCAGAGTGTGTCCTGGATAAGTCCTGGTGCCAGGAAGAGCTGTCGGTGGCTGTGAAGAGGGCGGTGATGCTGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS CCA 90 bp CTGCAAAGGCACAGCCATCATCACCACTGCTGCTGGCACACAGGGTaGTCAGGGTGTCTGAAGCCAGAACCTGTAAGCGAGGCGAGCCCG +
Preference number: 5 (lower is better)
Translates to: LQRHSHHHHCCWHTG*SGCLKPEPVSEASP
Trigger: CGGGCTCGCCTCGCTTACAGGTTCTGGCTTCAGACACCCTGACCACCCTGTGTGCCAGCAGCAGTGGTGATGATGGCTGTGCCTTTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000551920.1
CDS CCA 90 bp AGCAGCAGGGCGATGGCTGTCTCAGCGTACATGGAGATAACCCGCTaGCCCGCGCGCAGGGCGGTGTCACGCACAAACTCATTCTCATCA +
Preference number: 5 (lower is better)
Translates to: SSRAMAVSAYMEITR*PARRAVSRTNSFSS
Trigger: TGATGAGAATGAGTTTGTGCGTGACACCGCCCTGCGCGCGGGCCAGCGGGTTATCTCCATGTACGCTGAGACAGCCATCGCCCTGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp CTCATCTGGGGTCCCAAGCTTTTCCTTCAGGGCCAGCATGACCGCTaGGAGGATCACGCCAAGATGACGGGTGAGGGCATCACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LIWGPKLFLQGQHDR*EDHAKMTGEGITSH
Trigger: GTGGCTGGTGATGCCCTCACCCGTCATCTTGGCGTGATCCTCCCAGCGGTCATGCTGGCCCTGAAGGAAAAGCTTGGGACCCCAGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp GGACCCGGTCCGGCGACAGGACGGAAAGGGAGCCCATGGCATTCATaGAGGACTGCCAGACAAACGCAGACATGGTCAGTGTGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: GPGPATGRKGSPWHS*RTARQTQTWSVCAK
Trigger: CTTGGCACACACTGACCATGTCTGCGTTTGTCTGGCAGTCCTCCATGAATGCCATGGGCTCCCTTTCCGTCCTGTCGCCGGACCGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS TCA 90 bp CGATGGTGGAATGCAGCTGCTCGAAAGTCTTGGCTGCCGCCTCTCTaGCCTCCTCCAGTGGGTCACACAAAGCCTTCCTTGCCGTGGGCA +
Preference number: 5 (lower is better)
Translates to: RWWNAAARKSWLPPL*PPPVGHTKPSLPWA
Trigger: TGCCCACGGCAAGGAAGGCTTTGTGTGACCCACTGGAGGAGGTCAGAGAGGCGGCAGCCAAGACTTTCGAGCAGCTGCATTCCACCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS TCA 90 bp TGGGAGGATCACGCCAAGATGACGGGTGAGGGCATCACCAGCCACTaGCGAAAGGAAAGCCAGCACCCGGGTGTTGACAGGTGGCGTTGT +
Preference number: 5 (lower is better)
Translates to: WEDHAKMTGEGITSH*RKESQHPGVDRWRC
Trigger: ACAACGCCACCTGTCAACACCCGGGTGCTGGCTTTCCTTTCGTCAGTGGCTGGTGATGCCCTCACCCGTCATCTTGGCGTGATCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp CAGGCCCGAGACCAGGCTCCGCAGGTGGCTGGTGTAGTCAGCCTTTaGGCGGGAACAGTAGATGTTGAGGATGATGGCAGCAGCTTGCCT +
Preference number: 5 (lower is better)
Translates to: QARDQAPQVAGVVSL*AGTVDVEDDGSSLP
Trigger: AGGCAAGCTGCTGCCATCATCCTCAACATCTACTGTTCCCGCTCAAAGGCTGACTACACCAGCCACCTGCGGAGCCTGGTCTCGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp AGGATCTCCGGGTTCCTGATAACGGAGCCGATCTGCCTGAGCGCCTaGTGTCCAGCCTTCTGGACTTTGACATGGGAGTCGGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: RISGFLITEPICLSA*CPAFWTLTWESVST
Trigger: GGTGCTGACCGACTCCCATGTCAAAGTCCAGAAGGCTGGACAGCAGGCGCTCAGGCAGATCGGCTCCGTTATCAGGAACCCGGAGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GGAGCAATGGCCAGGATCTCCGGGTTCCTGATAACGGAGCCGATCTaGCTGAGCGCCTGCTGTCCAGCCTTCTGGACTTTGACATGGGAG +
Preference number: 5 (lower is better)
Translates to: GAMARISGFLITEPI*LSACCPAFWTLTWE
Trigger: CTCCCATGTCAAAGTCCAGAAGGCTGGACAGCAGGCGCTCAGGCAGATCGGCTCCGTTATCAGGAACCCGGAGATCCTGGCCATTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp TGCCGCCTCTCTGACCTCCTCCAGTGGGTCACACAAAGCCTTCCTTaGCGTGGGCACGAGGGATTCAGAGAAATACAGCACGGCATCCCG +
Preference number: 5 (lower is better)
Translates to: CRLSDLLQWVTQSLP*RGHEGFREIQHGIP
Trigger: CGGGATGCCGTGCTGTATTTCTCTGAATCCCTCGTGCCCACGGCAAGGAAGGCTTTGTGTGACCCACTGGAGGAGGTCAGAGAGGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp AGCCTGGTGGCCGATGGTGGAATGCAGCTGCTCGAAAGTCTTGGCTaGCGCCTCTCTGACCTCCTCCAGTGGGTCACACAAAGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: SLVADGGMQLLESLG*RLSDLLQWVTQSLP
Trigger: AGGAAGGCTTTGTGTGACCCACTGGAGGAGGTCAGAGAGGCGGCAGCCAAGACTTTCGAGCAGCTGCATTCCACCATCGGCCACCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS GCA 90 bp TCCGGCGACAGGACGGAAAGGGAGCCCATGGCATTCATGGAGGACTaGCAGACAAACGCAGACATGGTCAGTGTGTGCCAAGGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: SGDRTEREPMAFMED*QTNADMVSVCQGWH
Trigger: GTGCCAGCCTTGGCACACACTGACCATGTCTGCGTTTGTCTGGCAGTCCTCCATGAATGCCATGGGCTCCCTTTCCGTCCTGTCGCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS CCA 90 bp GAAGACTGCAGAGAGTGTAGAAGGTTCTTAGCAGTGGCTTCTGGCTaGGCCTCAGCCAACTGCTGGATGGCTGCCTGCAAGGCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: EDCRECRRFLAVASG*ASANCWMAACKALR
Trigger: CCGCAGGGCCTTGCAGGCAGCCATCCAGCAGTTGGCTGAGGCCCAGCCAGAAGCCACTGCTAAGAACCTTCTACACTCTCTGCAGTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp CACCGACAGCTCTTCCTGGCACCAGGACTTATCCAGGACACACTCTaGCTTCAGCAGGCGCAGGGTCACGTGGCTCACCAAAGTGCCCAA +
Preference number: 5 (lower is better)
Translates to: HRQLFLAPGLIQDTL*LQQAQGHVAHQSAQ
Trigger: TTGGGCACTTTGGTGAGCCACGTGACCCTGCGCCTGCTGAAGCCAGAGTGTGTCCTGGATAAGTCCTGGTGCCAGGAAGAGCTGTCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS CCA 90 bp CTGATAACGGAGCCGATCTGCCTGAGCGCCTGCTGTCCAGCCTTCTaGACTTTGACATGGGAGTCGGTCAGCACCTCCGTAAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LITEPICLSACCPAF*TLTWESVSTSVSLG
Trigger: GCCCAAGCTTACGGAGGTGCTGACCGACTCCCATGTCAAAGTCCAGAAGGCTGGACAGCAGGCGCTCAGGCAGATCGGCTCCGTTATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp GCTGCCATCTTCCGCGTGTCCGTGGAACGGTCCTGGAAGGCTCTCTaGACAATGGGCATGATGAGGGCCAGGGATGGGGCATCAATGAAG +
Preference number: 5 (lower is better)
Translates to: AAIFRVSVERSWKAL*TMGMMRARDGASMK
Trigger: CTTCATTGATGCCCCATCCCTGGCCCTCATCATGCCCATTGTCCAGAGAGCCTTCCAGGACCGTTCCACGGACACGCGGAAGATGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp CAGGCACAGGGTCCAAAAGCGATGCTTTCAGGCCAGGCGTCACGCTaGGCAGGTACGGAGCCAAGTCCTTCTGGTCTGTCAGGGAGTACA +
Preference number: 5 (lower is better)
Translates to: QAQGPKAMLSGQASR*AGTEPSPSGLSGST
Trigger: TGTACTCCCTGACAGACCAGAAGGACTTGGCTCCGTACCTGCCCAGCGTGACGCCTGGCCTGAAAGCATCGCTTTTGGACCCTGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp CAGCTGCTCGAAAGTCTTGGCTGCCGCCTCTCTGACCTCCTCCAGTaGGTCACACAAAGCCTTCCTTGCCGTGGGCACGAGGGATTCAGA +
Preference number: 5 (lower is better)
Translates to: QLLESLGCRLSDLLQ*VTQSLPCRGHEGFR
Trigger: TCTGAATCCCTCGTGCCCACGGCAAGGAAGGCTTTGTGTGACCCACTGGAGGAGGTCAGAGAGGCGGCAGCCAAGACTTTCGAGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS CCA 90 bp TCTCATGTCAGGATGGTGTCGTCCACCTGCTCCGTGGAGTCGGCCTaGCTGGCCAGCTTCTTCAGGGACCTTCGGTTAACCTCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SHVRMVSSTCSVESA*LASFFRDLRLTSFS
Trigger: GCTGAACGAGGTTAACCGAAGGTCCCTGAAGAAGCTGGCCAGCCAGGCCGACTCCACGGAGCAGGTGGACGACACCATCCTGACATGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGAGGGCAGCGATGAGCTaGGCAACAATGGGCTTCACT +
Preference number: 5 (lower is better)
Translates to: SQARHTTLGRDPPSVPHSRAAMS*ATMGFT
Trigger: AGTGAAGCCCATTGTTGCCAAGCTCATCGCTGCCCT...CGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATATCCACTGACCCAGCTTaGGTCCGCCACGATTCCTCC +
Preference number: 5 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDISTDPA*VRHDSS
Trigger: GGAGGAATCGTGGCGGACCAAAGCTGGGTCAGTGGA...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGAGCTTGGGCACAATGTaGGGTAGACAGGATGACAGC +
Preference number: 5 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRSLGTM*GRQDDS
Trigger: GCTGTCATCCTGTCTACCCAACATTGTGCCCAAGCT...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAAGCTGCTCGAAAGTCTaGGCTGCCGCCTCTCTGACC +
Preference number: 5 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDISCSKV*AAASLT
Trigger: GGTCAGAGAGGCGGCAGCCAAGACTTTCGAGCAGCT...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp TCCTCCAGGGCAGCCAGTAAGGAGGGGAGCACCAGCTTCACCCCGTaGGCACTCAAGTTGCTCATCACAGCCTTGGCACAGTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: SSRAASKEGSTSFTP*ALKLLITALAQSSA
Trigger: TGCAGATGACTGTGCCAAGGCTGTGATGAGCAACTTGAGTGCTCACGGGGTGAAGCTGGTGCTCCCCTCCTTACTGGCTGCCCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp TTTTCCTTCAGGGCCAGCATGACCGCTGGGAGGATCACGCCAAGATaGCGGGTGAGGGCATCACCAGCCACTGACGAAAGGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: FSFRASMTAGRITPR*RVRASPATDERKAS
Trigger: GCTGGCTTTCCTTTCGTCAGTGGCTGGTGATGCCCTCACCCGTCATCTTGGCGTGATCCTCCCAGCGGTCATGCTGGCCCTGAAGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp GTCAGTGTGTGCCAAGGCTGGCACTGGCAAGAGGTCCACCACACCTaGATGCCCCTAGCACTGGCTCCCCTTCTTTATGCCACTGCCTTG +
Preference number: 5 (lower is better)
Translates to: VSVCQGWHWQEVHHT*MPLALAPLLYATAL
Trigger: CAAGGCAGTGGCATAAAGAAGGGGAGCCAGTGCTAGGGGCATTCAGGTGTGGTGGACCTCTTGCCAGTGCCAGCCTTGGCACACACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS GCA 90 bp TTCCATGGCCGAAGAGTCACTGCACTGGCGTGCCAGGTTCCGCAGTaGCAGCACAGCTTCATCCATCAGGCGGGGACTGTTGGATTTCAG +
Preference number: 5 (lower is better)
Translates to: FHGRRVTALACQVPQ*QHSFIHQAGTVGFQ
Trigger: CTGAAATCCAACAGTCCCCGCCTGATGGATGAAGCTGTGCTGGCACTGCGGAACCTGGCACGCCAGTGCAGTGACTCTTCGGCCATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GCAGCACGTGAACCACATACGGCTCAAAAAGTTTCCCCAGCATGGTaGAGAGCATCTCGAAGGCAAAGAGGGCTCCCTCTCGCCGGCGGA +
Preference number: 5 (lower is better)
Translates to: AAREPHTAQKVSPAW*RASRRQRGLPLAGG
Trigger: TCCGCCGGCGAGAGGGAGCCCTCTTTGCCTTCGAGATGCTCTGCACCATGCTGGGGAAACTTTTTGAGCCGTATGTGGTTCACGTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp AGTAGCGGGGTGAGCAGAGACCCACCCAACCGCACACACCCAGACTaGATCAGGGCTGCACAGGTCACTCACGTAGAGCTTTTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: SSGVSRDPPNRTHPD*IRAAQVTHVELFLV
Trigger: TACCAGGAAAAGCTCTACGTGAGTGACCTGTGCAGCCCTGATGCAGTCTGGGTGTGTGCGGTTGGGTGGGTCTCTGCTCACCCCGCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548132.1
CDS GCA 90 bp CCACACCTGAATGCCCCTAGCACTGGCTCCCCTTCTTTATGCCACTaGCTTGTTACTCCTGGGCAATGCCCATCACAGTGGCCGGCTGGA +
Preference number: 5 (lower is better)
Translates to: PHLNAPSTGSPSLCH*LVTPGQCPSQWPAG
Trigger: TCCAGCCGGCCACTGTGATGGGCATTGCCCAGGAGTAACAAGGCAGTGGCATAAAGAAGGGGAGCCAGTGCTAGGGGCATTCAGGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS GCA 90 bp GGTCCACCACACCTGAATGCCCCTAGCACTGGCTCCCCTTCTTTATaGCACTGCCTTGTTACTCCTGGGCAATGCCCATCACAGTGGCCG +
Preference number: 5 (lower is better)
Translates to: GPPHLNAPSTGSPSL*HCLVTPGQCPSQWP
Trigger: CGGCCACTGTGATGGGCATTGCCCAGGAGTAACAAGGCAGTGGCATAAAGAAGGGGAGCCAGTGCTAGGGGCATTCAGGTGTGGTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS CCA 90 bp CCGATCTGCCTGAGCGCCTGCTGTCCAGCCTTCTGGACTTTGACATaGGAGTCGGTCAGCACCTCCGTAAGCTTGGGCACAATGTTGGGT +
Preference number: 5 (lower is better)
Translates to: PICLSACCPAFWTLT*ESVSTSVSLGTMLG
Trigger: ACCCAACATTGTGCCCAAGCTTACGGAGGTGCTGACCGACTCCCATGTCAAAGTCCAGAAGGCTGGACAGCAGGCGCTCAGGCAGATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp CAAACTTGGTGTCCAGCAGGGTCTGCAAGCACTTCTGGGTCTTCCTaGAGGGATCCGTCAGGGCATCCAGGAGGACTGGAGCAATGGCCA +
Preference number: 5 (lower is better)
Translates to: QTWCPAGSASTSGSS*RDPSGHPGGLEQWP
Trigger: TGGCCATTGCTCCAGTCCTCCTGGATGCCCTGACGGATCCCTCCAGGAAGACCCAGAAGTGCTTGCAGACCCTGCTGGACACCAAGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp GGGAGCCCATGGCATTCATGGAGGACTGCCAGACAAACGCAGACATaGTCAGTGTGTGCCAAGGCTGGCACTGGCAAGAGGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: GSPWHSWRTARQTQT*SVCAKAGTGKRSTT
Trigger: TGTGGTGGACCTCTTGCCAGTGCCAGCCTTGGCACACACTGACCATGTCTGCGTTTGTCTGGCAGTCCTCCATGAATGCCATGGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS-3UTR CAA 90 bp GCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGATGTCTCCTTGTCGCTaGGCTCTCGATGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: AKPDTPHWAEIHRLCPTRMSPCR*ALDGKT
Trigger: TGTCTTTCCATCGAGAGCCAAGCGACAAGGAGACAT...CCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp CAACGCCAAGCCACACCTGGCTTCCCACTGATCTGGAGGAGATTCTaGAATAACTCGTCCCAAAGCATCCAGCACTGGGGGCGGCCGGTA +
Preference number: 5 (lower is better)
Translates to: QRQATPGFPLIWRRF*NNSSQSIQHWGRPV
Trigger: TACCGGCCGCCCCCAGTGCTGGATGCTTTGGGACGAGTTATTTCAGAATCTCCTCCAGATCAGTGGGAAGCCAGGTGTGGCTTGGCGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp AAATGCTTTGCAACGGGCAGATCAATGACCTGGGCACCAGGATTGTaGGGCAGGAAACTAGCCGCAGCTACCCTGAGCCACCGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: KCFATGRSMTWAPGL*GRKLAAATLSHREP
Trigger: GGGCTCACGGTGGCTCAGGGTAGCTGCGGCTAGTTTCCTGCCTCACAATCCTGGTGCCCAGGTCATTGATCTGCCCGTTGCAAAGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548132.1
CDS GCA 90 bp CTCTCGCCGGCGGAAGTTCTTCTTATCTTGGATGGCATCAGTCAGTaGCGCCATCATCTCCTGTTGCTTCAGCGAGAGGATGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: LSPAEVLLILDGISQ*RHHLLLLQREDAQA
Trigger: GGCCTGGGCATCCTCTCGCTGAAGCAACAGGAGATGATGGCGGCACTGACTGATGCCATCCAAGATAAGAAGAACTTCCGCCGGCGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp CCAGTAAGGAGGGGAGCACCAGCTTCACCCCGTGAGCACTCAAGTTaGTCATCACAGCCTTGGCACAGTCATCTGCAGCCTCACGCACAT +
Preference number: 5 (lower is better)
Translates to: PVRRGAPASPREHSS*SSQPWHSHLQPHAH
Trigger: ATGTGCGTGAGGCTGCAGATGACTGTGCCAAGGCTGTGATGAGCAACTTGAGTGCTCACGGGGTGAAGCTGGTGCTCCCCTCCTTACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp AAAAATGGGAGAATGTCCTCCAGAGCCTGGTGGCCGATGGTGGAATaGAGCTGCTCGAAAGTCTTGGCTGCCGCCTCTCTGACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KNGRMSSRAWWPMVE*SCSKVLAAASLTSS
Trigger: GGAGGAGGTCAGAGAGGCGGCAGCCAAGACTTTCGAGCAGCTGCATTCCACCATCGGCCACCAGGCTCTGGAGGACATTCTCCCATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS GCA 90 bp TGCCGCCTCTCTGACCTCCTCCAGTGGGTCACACAAAGCCTTCCTTaGCGTGGGCACGAGGGATTCAGAGAAATACAGCACCTGCAATGG +
Preference number: 5 (lower is better)
Translates to: CRLSDLLQWVTQSLP*RGHEGFREIQHLQW
Trigger: CCATTGCAGGTGCTGTATTTCTCTGAATCCCTCGTGCCCACGGCAAGGAAGGCTTTGTGTGACCCACTGGAGGAGGTCAGAGAGGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547263.1
CDS GCA 90 bp ACTGGCTCCCCTTCTTTATGCCACTGCCTTGTTACTCCTGGGCAATaGCCATCACAGTGGCCGGCTGGAGTCTGCGTCTGCTTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: TGSPSLCHCLVTPGQ*PSQWPAGVCVCFPH
Trigger: GTGAGGAAAGCAGACGCAGACTCCAGCCGGCCACTGTGATGGGCATTGCCCAGGAGTAACAAGGCAGTGGCATAAAGAAGGGGAGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS CCA 90 bp TCCTTGGTGTTGTCAAGAAGAGCCTTCAGGATGGGCTTGATGGCCTaGGGGTCCAGGGGAGGCAGTGGGTCCTTATTTGCCCACCAGATC +
Preference number: 5 (lower is better)
Translates to: SLVLSRRAFRMGLMA*GSRGGSGSLFAHQI
Trigger: GATCTGGTGGGCAAATAAGGACCCACTGCCTCCCCTGGACCCCCAGGCCATCAAGCCCATCCTGAAGGCTCTTCTTGACAACACCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGTTCCAGATGTCTCCTaGTCGCTTGGCTCTCGATGG +
Preference number: 5 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDIVPDVS*SLGSRW
Trigger: CCATCGAGAGCCAAGCGACAAGGAGACATCTGGAAC...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp GTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAAGGCCGGACGGGTTCTaGGCCAGGATGATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: VPHSGYRKKVGSASSQTRRPDGF*ARMMSS
Trigger: GCTGGACATCATCCTGGCCAAGAACCCGTCCGGCCT...TCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCGGTCTAGGCCCATCATaGACCAGAGCCTCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: APGLPFAEAHACAFPSLLGLGPS*TRASQP
Trigger: TGGCTGAGAGGCTCTGGTCAATGATGGGCCTAGACC...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAACTCTTGTCCAGGTGCTaGGCCAGAGAGCCCATCAGG +
Preference number: 5 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQLLSRC*AREPIR
Trigger: CCTGATGGGCTCTCTGGCCAAGCACCTGGACAAGAG...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp GCTCCTGGGCTGCCATTTGCTGAGGCGCATGCGTGTGCTTTTCCTTCTCTTCTCCGCCATCATCTCCTGTaGCTTCAGCGAGAGGATGCC +
Preference number: 5 (lower is better)
Translates to: APGLPFAEAHACAFPSLLRHHLL*LQREDA
Trigger: GGCATCCTCTCGCTGAAGCAACAGGAGATGATGGCG...GAGAAGAGAAGGAAAAGCACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCGAGCACAGTACGCCATaGCCCCAAGAAGCTCCACTG +
Preference number: 5 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPEHSTP*PQEAPL
Trigger: CAGTGGAGCTTCTTGGGGCAATGGCGTACTGTGCTC...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCGAGGAGATGCGAGTGTaGTCCTCATCGTGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPEEMRV*SSSCPS
Trigger: GCTGGGACACGATGAGGACAACACTCGCATCTCCTC...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp AGAGTGGCTTCACCTGAGAGCTGTCCAAATACTGGGAGAGCTTGTTaGGGGCCAACGCCAAGCCACACCTGGCTTCCCACTGATCTGGAG +
Preference number: 5 (lower is better)
Translates to: RVASPESCPNTGRAC*GPTPSHTWLPTDLE
Trigger: CTCCAGATCAGTGGGAAGCCAGGTGTGGCTTGGCGTTGGCCCTCAACAAGCTCTCCCAGTATTTGGACAGCTCTCAGGTGAAGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp ATCTCACTTAGGCCAATGCACACACCCTGCCTCTCATCGCTCTTCTaGGACCTCAGGCCTTCCTCAAGGATGGGGATGATCTCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: ISLRPMHTPCLSSLF*DLRPSSRMGMISGR
Trigger: CCTCCCCGAGATCATCCCCATCCTTGAGGAAGGCCTGAGGTCTCAGAAGAGCGATGAGAGGCAGGGTGTGTGCATTGGCCTAAGTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp ACGATGTTTTTCCGGATGACGGCATCCACTTTGGCCCCTGCTCCCTaGATCACAAACCTCAGGGCCTGCAGCATGGTGTCCCTGACACCT +
Preference number: 5 (lower is better)
Translates to: TMFFRMTASTLAPAP*ITNLRACSMVSLTP
Trigger: AGGTGTCAGGGACACCATGCTGCAGGCCCTGAGGTTTGTGATTCAGGGAGCAGGGGCCAAAGTGGATGCCGTCATCCGGAAAAACATCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp GCAATGGGGATCCTGTCCGCCGTGGCACTGCTCAGGATCATTTCCTaGACATCACTGCTATATCTGCCGGCACAAAGTCTGCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: AMGILSAVALLRIIS*TSLLYLPAQSLPGA
Trigger: GGCTCCTGGCAGACTTTGTGCCGGCAGATATAGCAGTGATGTTCAGGAAATGATCCTGAGCAGTGCCACGGCGGACAGGATCCCCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GATGGGGCATCAATGAAGTGGACAAACTTGGTGTCCAGCAGGGTCTaGAAGCACTTCTGGGTCTTCCTGGAGGGATCCGTCAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: DGASMKWTNLVSSRV*KHFWVFLEGSVRAS
Trigger: GGATGCCCTGACGGATCCCTCCAGGAAGACCCAGAAGTGCTTGCAGACCCTGCTGGACACCAAGTTTGTCCACTTCATTGATGCCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GTCCTTCTGGTCTGTCAGGGAGTACATGTTGCCAATAATCTGGGCTaGCATCTTCCGCGTGTCCGTGGAACGGTCCTGGAAGGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: VLLVCQGVHVANNLG*HLPRVRGTVLEGSL
Trigger: CAGAGAGCCTTCCAGGACCGTTCCACGGACACGCGGAAGATGGCAGCCCAGATTATTGGCAACATGTACTCCCTGACAGACCAGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp AGGATGGAGGTCACTCCCTTCTTCGGGAGGCAGAATCCTGGCACATaGTCGCCTTTGCTCTCGTTCCCTATGAGCCGGATTTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: RMEVTPFFGRQNPGT*SPLLSFPMSRISLC
Trigger: GCACAAGGAAATCCGGCTCATAGGGAACGAGAGCAAAGGCGAGCATGTGCCAGGATTCTGCCTCCCGAAGAAGGGAGTGACCTCCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000549815.1
CDS CCA 90 bp GGCACTGCACTTCCACCAGTTTGTTCCAGATGTCTCCTTGTCGCTTaGCTCTCGATGGAAAGACAATGCGCACCAGGAGGCAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GTALPPVCSRCLLVA*LSMERQCAPGGRSR
Trigger: CCTGGACCTGCCTCCTGGTGCGCATTGTCTTTCCATCGAGAGCCAAGCGACAAGGAGACATCTGGAACAAACTGGTGGAAGTGCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp TGCACGGCAACTAAGGATGGGTGGTGGGAGATGATCAGCATTTCCTaGGCCAGTTGTTCAGTGTCGGTGACATCACCCTTGAGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: CTATKDGWWEMISIS*ASCSVSVTSPLSPG
Trigger: GCCAGGGCTCAAGGGTGATGTCACCGACACTGAACAACTGGCCCAGGAAATGCTGATCATCTCCCACCACCCATCCTTAGTTGCCGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp TGGCAACAATGGGCTTCACTTTGGGGTCACTCTTGTCCAGGTGCTTaGCCAGAGAGCCCATCAGGACCACCACACTCTGTCGCACAGCAT +
Preference number: 5 (lower is better)
Translates to: WQQWASLWGHSCPGA*PESPSGPPHSVAQH
Trigger: ATGCTGTGCGACAGAGTGTGGTGGTCCTGATGGGCTCTCTGGCCAAGCACCTGGACAAGAGTGACCCCAAAGTGAAGCCCATTGTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp ATGAAGTGGACAAACTTGGTGTCCAGCAGGGTCTGCAAGCACTTCTaGGTCTTCCTGGAGGGATCCGTCAGGGCATCCAGGAGGACTGGA +
Preference number: 5 (lower is better)
Translates to: MKWTNLVSSRVCKHF*VFLEGSVRASRRTG
Trigger: TCCAGTCCTCCTGGATGCCCTGACGGATCCCTCCAGGAAGACCCAGAAGTGCTTGCAGACCCTGCTGGACACCAAGTTTGTCCACTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp GTCCTGGAAGGCTCTCTGGACAATGGGCATGATGAGGGCCAGGGATaGGGCATCAATGAAGTGGACAAACTTGGTGTCCAGCAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: VLEGSLDNGHDEGQG*GINEVDKLGVQQGL
Trigger: CAGACCCTGCTGGACACCAAGTTTGTCCACTTCATTGATGCCCCATCCCTGGCCCTCATCATGCCCATTGTCCAGAGAGCCTTCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp GCCAAGTCCTTCTGGTCTGTCAGGGAGTACATGTTGCCAATAATCTaGGCTGCCATCTTCCGCGTGTCCGTGGAACGGTCCTGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: AKSFWSVREYMLPII*AAIFRVSVERSWKA
Trigger: AGCCTTCCAGGACCGTTCCACGGACACGCGGAAGATGGCAGCCCAGATTATTGGCAACATGTACTCCCTGACAGACCAGAAGGACTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGTAACGTGCCACTGCTaGGGAGAGGGCTTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARVTCHC*GEGFGP
Trigger: GGGGCCGAAGCCCTCTCCCAAGCAGTGGCACGTTAC...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCGCAGTGATGATCGCCTaGTTGGACTGGGCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPAVMIA*LDWAVP
Trigger: TGGAACTGCCCAGTCCAACAAGGCGATCATCACTGC...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp CCACTGACAACTTTAAGAGCAACAAGGCTGCGGCAACCCCTTCAGTaGTGGTGGGAACCTGAGTGCTTTGGGAGGCTGCCTTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: PLTTLRATRLRQPLQ*WWEPECFGRLPSPL
Trigger: CAGTGGAGAAGGCAGCCTCCCAAAGCACTCAGGTTCCCACCATCACTGAAGGGGTTGCCGCAGCCTTGTTGCTCTTAAAGTTGTCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp CGTGTCCCAGCATGCTCAGCAGGAGTGAGACGATGTTTTTCCGGATaGCGGCATCCACTTTGGCCCCTGCTCCCTGAATCACAAACCTCA +
Preference number: 5 (lower is better)
Translates to: RVPACSAGVRRCFSG*RHPLWPLLPESQTS
Trigger: TGAGGTTTGTGATTCAGGGAGCAGGGGCCAAAGTGGATGCCGTCATCCGGAAAAACATCGTCTCACTCCTGCTGAGCATGCTGGGACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GAGTCTCCGCAGAAGGTTCAGGCCATTCTTCTCATCAGTATCAGGTaGTGGCAATACCATGTGGAGTTCCATCAGCCCCCGGAGCACGGT +
Preference number: 5 (lower is better)
Translates to: ESPQKVQAILLISIR*WQYHVEFHQPPEHG
Trigger: ACCGTGCTCCGGGGGCTGATGGAACTCCACATGGTATTGCCAGCACCTGATACTGATGAGAAGAATGGCCTGAACCTTCTGCGGAGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000551920.1
CDS GCA 90 bp CGAGTTGACGTTCTCCTTCCCATGAGTGTTGAGCGTTGCGAGGGCTaGATCCAACATGCACTTCCGGACATCTGGGTGTCGGTCATTGAG +
Preference number: 5 (lower is better)
Translates to: RVDVLLPMSVERCEG*IQHALPDIWVSVIE
Trigger: CTCAATGACCGACACCCAGATGTCCGGAAGTGCATGTTGGATGCAGCCCTCGCAACGCTCAACACTCATGGGAAGGAGAACGTCAACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp TTCCACCAGTTTGTTCCAGATGTCTCCTTGTCGCTTGGCTCTCGATaGAAAGACAATGCGCACCAGGAGGCAGGTCCAGGTCAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: FHQFVPDVSLSLGSR*KDNAHQEAGPGQGQ
Trigger: CTGGCCTTGACCTGGACCTGCCTCCTGGTGCGCATTGTCTTTCCATCGAGAGCCAAGCGACAAGGAGACATCTGGAACAAACTGGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp GACTTCAGCAAGGGCAGAAAAGAGTCGACCAAAACAGGGATGTACTaGGTCAGGCCGGACGGGTTCTTGGCCAGGATGATGTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: DFSKGRKESTKTGMY*VRPDGFLARMMSSS
Trigger: ACTGCTGGACATCATCCTGGCCAAGAACCCGTCCGGCCTGACCCAGTACATCCCTGTTTTGGTCGACTCTTTTCTGCCCTTGCTGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS CCA 90 bp GAGAGCCCATCAGGACCACCACACTCTGTCGCACAGCATCATAGCTaGCATCATTGGGCGCGTTCTTCAGGAACTCCTCGAATACTGGCA +
Preference number: 5 (lower is better)
Translates to: ESPSGPPHSVAQHHS*HHWARSSGTPRILA
Trigger: TGCCAGTATTCGAGGAGTTCCTGAAGAACGCGCCCAATGATGCCAGCTATGATGCTGTGCGACAGAGTGTGGTGGTCCTGATGGGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp CAAAGAGGGCTCCCTCTCGCCGGCGGAAGTTCTTCTTATCTTGGATaGCATCAGTCAGTGCCGCCATCATCTCCTGTTGCTTCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: QRGLPLAGGSSSYLG*HQSVPPSSPVASAR
Trigger: TCTCGCTGAAGCAACAGGAGATGATGGCGGCACTGACTGATGCCATCCAAGATAAGAAGAACTTCCGCCGGCGAGAGGGAGCCCTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp AAGGCAAAGAGGGCTCCCTCTCGCCGGCGGAAGTTCTTCTTATCTTaGATGGCATCAGTCAGTGCCGCCATCATCTCCTGTTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: KAKRAPSRRRKFFLS*MASVSAAIISCCFS
Trigger: GCTGAAGCAACAGGAGATGATGGCGGCACTGACTGATGCCATCCAAGATAAGAAGAACTTCCGCCGGCGAGAGGGAGCCCTCTTTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp TGGACAATGGGCATGATGAGGGCCAGGGATGGGGCATCAATGAAGTaGACAAACTTGGTGTCCAGCAGGGTCTGCAAGCACTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: WTMGMMRARDGASMK*TNLVSSRVCKHFWV
Trigger: GACCCAGAAGTGCTTGCAGACCCTGCTGGACACCAAGTTTGTCCACTTCATTGATGCCCCATCCCTGGCCCTCATCATGCCCATTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp TCCAGCTGCTTTAGTAAAAATGGGAGAATGTCCTCCAGAGCCTGGTaGCCGATGGTGGAATGCAGCTGCTCGAAAGTCTTGGCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: SSCFSKNGRMSSRAW*PMVECSCSKVLAAA
Trigger: GGCGGCAGCCAAGACTTTCGAGCAGCTGCATTCCACCATCGGCCACCAGGCTCTGGAGGACATTCTCCCATTTTTACTAAAGCAGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS-3UTR CAA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCCAGAAACTGCTCAGTTaGGCCTCAGCCTGTGAGTCA +
Preference number: 5 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALQKLLS*ASACES
Trigger: TGACTCACAGGCTGAGGCCAAACTGAGCAGTTTCTG...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTTCGGTGACATCACCCTaGAGCCCTGGCACACCGGAG +
Preference number: 5 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCSVTSP*SPGTPE
Trigger: CTCCGGTGTGCCAGGGCTCAAGGGTGATGTCACCGA...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCTCTGGGTGTCGGTCATaGAGGGCATCAGGGACAAAA +
Preference number: 5 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPSGCRS*RASGTK
Trigger: TTTTGTCCCTGATGCCCTCAATGACCGACACCCAGA...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACTTTGGGGTCACTCTaGTCCAGGTGCTTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQTLGSL*SRCLAR
Trigger: TCTGGCCAAGCACCTGGACAAGAGTGACCCCAAAGT...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCACAGTCTGACCCTGCTTTGCGCTCTGCGTACTaGTCTGACTCCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SQTRAQAQEKRNPQSDPALRSAY*SDSSSC
Trigger: GCAGCTGCTGGAGTCAGACAAGTACGCAGAGCGCAA...AGCAGGGTCAGACTGTGGGTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CACCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCGTCAGGGAGTACATGTaGCCAATAATCTGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HRLCPTRDIGKRLVAPALVREYM*PIIWAA
Trigger: GGCAGCCCAGATTATTGGCAACATGTACTCCCTGAC...GAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp ACAATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTTGGCCCCAAGGGCCTTaGCAGATACGGTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: TILKSQARHTTLGRDPPSWPQGP*QIRSAP
Trigger: AGGTGCGGACCGTATCTGCAAAGGCCCTTGGGGCCA...AGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCGTGATGATCGCCTTGTaGGACTGGGCAGTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: LKSQARHTTLGRDPPSVPVMIAL*DWAVPK
Trigger: CTTTGGAACTGCCCAGTCCAACAAGGCGATCATCAC...GGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACAGGGCTGGAGTCATaGAAGAGGCGGATCAGGCCC +
Preference number: 5 (lower is better)
Translates to: KRLVAPALKPELKHRRRGTGLES*KRRIRP
Trigger: GGGCCTGATCCGCCTCTTCAATGACTCCAGCCCTGT...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTAACAGGCTGGAAAGTTaGGCCGGCAACTGCCCTCCG +
Preference number: 5 (lower is better)
Translates to: SNSLSNLYPSPDLGTARANRLES*AGNCPP
Trigger: CGGAGGGCAGTTGCCGGCCAAACTTTCCAGCCTGTT...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGACTCCTGGGCTGCCATTaGCTGAGGCGCATGCGTGTG +
Preference number: 5 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARLLGCH*LRRMRV
Trigger: CACACGCATGCGCCTCAGCAAATGGCAGCCCAGGAG...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTTACCCCTCCCCAGACTaGGGAACTGCCAGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SNSLSNLYPSPDLGTARAYPSPD*GTARAV
Trigger: CACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTA...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp GGGATTCAGAGAAATACAGCACGGCATCCCGGCTGGTGGACTTCATaGTCTCACTTAGGCCAATGCACACACCCTGCCTCTCATCGCTCT +
Preference number: 5 (lower is better)
Translates to: GIQRNTARHPGWWTS*SHLGQCTHPASHRS
Trigger: AGAGCGATGAGAGGCAGGGTGTGTGCATTGGCCTAAGTGAGATCATGAAGTCCACCAGCCGGGATGCCGTGCTGTATTTCTCTGAATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp ACCTCCGTAAGCTTGGGCACAATGTTGGGTAGACAGGATGACAGCTaGTTAGGAGCACAGTACGCCATTGCCCCAAGAAGCTCCACTGAC +
Preference number: 5 (lower is better)
Translates to: TSVSLGTMLGRQDDS*LGAQYAIAPRSSTD
Trigger: GTCAGTGGAGCTTCTTGGGGCAATGGCGTACTGTGCTCCTAAGCAGCTGTCATCCTGTCTACCCAACATTGTGCCCAAGCTTACGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp TCCTGTCCGCCGTGGCACTGCTCAGGATCATTTCCTGAACATCACTaGTATATCTGCCGGCACAAAGTCTGCCAGGAGCCACATTCACAG +
Preference number: 5 (lower is better)
Translates to: SCPPWHCSGSFPEHH*YICRHKVCQEPHSQ
Trigger: CTGTGAATGTGGCTCCTGGCAGACTTTGTGCCGGCAGATATAGCAGTGATGTTCAGGAAATGATCCTGAGCAGTGCCACGGCGGACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp TTCTGCAGACACTTAACGAACAGGCTGGAAAGTTTGGCCGGCAACTaGCCTCCGCCTGTCTCGATGTGGTGTCTCATGAGAAAGCCCATG +
Preference number: 5 (lower is better)
Translates to: FCRHLTNRLESLAGN*PPPVSMWCLMRKPM
Trigger: CATGGGCTTTCTCATGAGACACCACATCGAGACAGGCGGAGGGCAGTTGCCGGCCAAACTTTCCAGCCTGTTCGTTAAGTGTCTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp CTGAAACACCTCTTCACCCTGCCGCATCTTGAGGAGGTTGACAATTaGCTGGTCGCTGTAGGCCCTGACCACGGTGTTCTTATCCTTGGT +
Preference number: 5 (lower is better)
Translates to: LKHLFTLPHLEEVDN*LVAVGPDHGVLILG
Trigger: ACCAAGGATAAGAACACCGTGGTCAGGGCCTACAGCGACCAGGCAATTGTCAACCTCCTCAAGATGCGGCAGGGTGAAGAGGTGTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp TCTCCGCAGAAGGTTCAGGCCATTCTTCTCATCAGTATCAGGTGCTaGCAATACCATGTGGAGTTCCATCAGCCCCCGGAGCACGGTTTC +
Preference number: 5 (lower is better)
Translates to: SPQKVQAILLISIRC*QYHVEFHQPPEHGF
Trigger: GAAACCGTGCTCCGGGGGCTGATGGAACTCCACATGGTATTGCCAGCACCTGATACTGATGAGAAGAATGGCCTGAACCTTCTGCGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000551920.1
CDS CCA 90 bp TCAGGACCACCACACTCTGTCGCACAGCATCATAGCTGGCATCATTaGGCGCGTTCTTCAGGAACTCCTCGAATACTGGCAACAGCGAGT +
Preference number: 5 (lower is better)
Translates to: SGPPHSVAQHHSWHH*ARSSGTPRILATAS
Trigger: ACTCGCTGTTGCCAGTATTCGAGGAGTTCCTGAAGAACGCGCCCAATGATGCCAGCTATGATGCTGTGCGACAGAGTGTGGTGGTCCTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp CTGAACCTGATTCTCCAAAGGTCATCAAAGAGGCCTTGCTCTAGCTaGGGCAGCAGCAGGGCGATGGCTGTCTCAGCGTACATGGAGATA +
Preference number: 5 (lower is better)
Translates to: LNLILQRSSKRPCSS*GSSRAMAVSAYMEI
Trigger: TATCTCCATGTACGCTGAGACAGCCATCGCCCTGCTGCTGCCCCAGCTAGAGCAAGGCCTCTTTGATGACCTTTGGAGAATCAGGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp AAAATGAAAACATTGAGCAAAGATGTGGAGCGGCAATGCTGCTGCTaGCCCAGGCCTCTCATGTCAGGATGGTGTCGTCCACCTGCTCCG +
Preference number: 5 (lower is better)
Translates to: KMKTLSKDVERQCCC*PRPLMSGWCRPPAP
Trigger: CGGAGCAGGTGGACGACACCATCCTGACATGAGAGGCCTGGGCCAGCAGCAGCATTGCCGCTCCACATCTTTGCTCAATGTTTTCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCGGATCTCCTCCTCCTaGTCAAACTTGACCACCCAG +
Preference number: 5 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNRISSS*SNLTTQ
Trigger: CTGGGTGGTCAAGTTTGACAAGGAGGAGGAGATCCG...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAATTGCTCATCACAGCCTaGGCACAGTCATCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCELLITA*AQSSAA
Trigger: GGCTGCAGATGACTGTGCCAAGGCTGTGATGAGCAA...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGACCAGCCTTCTGGACTTaGACATGGGAGTCGGTCAGC +
Preference number: 5 (lower is better)
Translates to: KRLVAPALKPELKHRRRGPAFWT*TWESVS
Trigger: GCTGACCGACTCCCATGTCAAAGTCCAGAAGGCTGG...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATACTTAATAGCCATGACTaGCTTCAGACCATCCAAGGC +
Preference number: 5 (lower is better)
Translates to: PDTPHWAEIHRLCPTRDILNSHD*LQTIQG
Trigger: GCCTTGGATGGTCTGAAGCAAGTCATGGCTATTAAG...TATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp CTGCTCTTACTGGGAACACCTGCTTTGGAGCCTATACCAGAAGACTaGAGAGAGTGTAGAAGGTTCTTAGCAGTGGCTTCTGGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LLLLGTPALEPIPED*RECRRFLAVASGWA
Trigger: GGCCCAGCCAGAAGCCACTGCTAAGAACCTTCTACACTCTCTGCAGTCTTCTGGTATAGGCTCCAAAGCAGGTGTTCCCAGTAAGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp ACATGCTCGCCTTTGCTCTCGTTCCCTATGAGCCGGATTTCCTTGTaGAGCTCTTCAATGAGTGCCAACTGGTTGCCAGCATCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TCSPLLSFPMSRISL*SSSMSANWLPASSF
Trigger: GAAGCTGGATGCTGGCAACCAGTTGGCACTCATTGAAGAGCTGCACAAGGAAATCCGGCTCATAGGGAACGAGAGCAAAGGCGAGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000549815.1
CDS-3UTR CAA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCACTGGGAACACCTGCTTaGGAGCCTATACCAGAAGAC +
Preference number: 5 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPLGTPA*EPIPED
Trigger: GTCTTCTGGTATAGGCTCCAAAGCAGGTGTTCCCAG...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CCGTCTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAATAGCAAATAGGTGCTaGGTCAGGGATTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: PSVPHSGYRKKVGSASSQIANRC*VRDSMA
Trigger: GGCCATGGAATCCCTGACCAAGCACCTATTTGCTAT...TTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAGACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACAAATACTGGGAGAGCTaGTTGAGGGCCAACGCCAAG +
Preference number: 5 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNKYWES*LRANAK
Trigger: CTTGGCGTTGGCCCTCAACAAGCTCTCCCAGTATTT...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AATATTGAAAAGCCAAGCCAGACACACCACACTGGGCAGAGATCCACCGTCTGTGGCACATGCTCGCCTTaGCTCTCGTTCCCTATGAGC +
Preference number: 5 (lower is better)
Translates to: NIEKPSQTHHTGQRSTVCGTCSP*LSFPMS
Trigger: GCTCATAGGGAACGAGAGCAAAGGCGAGCATGTGCC...ACAGACGGTGGATCTCTGCCCAGTGTGGTGTGTCTGGCTTGGCTTTTCAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAATGGCGCGGATGCCATaGAGCAGCTCTGTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARMARMP*SSSVKR
Trigger: CCTCTTCACAGAGCTGCTCAATGGCATCCGCGCCAT...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp CTTGGGCACTTCCATAGTGAATCGGTTACACCAGAGAGCCAGGACTaGGACAGCGTGTACCAAGGTCCCTTCATGAACTTCCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LGHFHSESVTPESQD*DSVYQGPFMNFLLK
Trigger: CTTCAGCAGGAAGTTCATGAAGGGACCTTGGTACACGCTGTCTCAGTCCTGGCTCTCTGGTGTAACCGATTCACTATGGAAGTGCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp TCAAAAATGAAAACATTGAGCAAAGATGTGGAGCGGCAATGCTGCTaGTGGCCCAGGCCTCTCATGTCAGGATGGTGTCGTCCACCTGCT +
Preference number: 5 (lower is better)
Translates to: SKMKTLSKDVERQCC*WPRPLMSGWCRPPA
Trigger: AGCAGGTGGACGACACCATCCTGACATGAGAGGCCTGGGCCAGCAGCAGCATTGCCGCTCCACATCTTTGCTCAATGTTTTCATTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GCCTTCCTTGCCGTGGGCACGAGGGATTCAGAGAAATACAGCACCTaGAATGGCAAGCTACAACTGTACCAGATGCAGGAAAGGCAAAGA +
Preference number: 5 (lower is better)
Translates to: AFLAVGTRDSEKYST*NGKLQLYQMQERQR
Trigger: TCTTTGCCTTTCCTGCATCTGGTACAGTTGTAGCTTGCCATTGCAGGTGCTGTATTTCTCTGAATCCCTCGTGCCCACGGCAAGGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547263.1
CDS GCA 90 bp TGCAGCTCTTCAATGAGTGCCAACTGGTTGCCAGCATCCAGCTTCTaGAGGAATCCAGGAAAAAGCGAGAGGATGTACAGCCCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: CSSSMSANWLPASSF*RNPGKSERMYSPLK
Trigger: CTTGAGAGGGCTGTACATCCTCTCGCTTTTTCCTGGATTCCTGCAGAAGCTGGATGCTGGCAACCAGTTGGCACTCATTGAAGAGCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549815.1
CDS GCA 90 bp CTCGTTCCCTATGAGCCGGATTTCCTTGTGCAGCTCTTCAATGAGTaGCAACTGGTTGCCAGCATCCAGCTTCTGCAGGAATCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: LVPYEPDFLVQLFNE*QLVASIQLLQESRK
Trigger: TTTCCTGGATTCCTGCAGAAGCTGGATGCTGGCAACCAGTTGGCACTCATTGAAGAGCTGCACAAGGAAATCCGGCTCATAGGGAACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549815.1
CDS CCA 90 bp ATAGCTGGCATCATTGGGCGCGTTCTTCAGGAACTCCTCGAATACTaGCAACAGCGAGTTGACGTTCTCCTTCCCATGAGTGTTGAGCGT +
Preference number: 5 (lower is better)
Translates to: IAGIIGRVLQELLEY*QQRVDVLLPMSVER
Trigger: ACGCTCAACACTCATGGGAAGGAGAACGTCAACTCGCTGTTGCCAGTATTCGAGGAGTTCCTGAAGAACGCGCCCAATGATGCCAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp CCTTGCCGTGGGCACGAGGGATTCAGAGAAATACAGCACCTGCAATaGCAAGCTACAACTGTACCAGATGCAGGAAAGGCAAAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: PCRGHEGFREIQHLQ*QATTVPDAGKAKKE
Trigger: CTCCTTCTTTGCCTTTCCTGCATCTGGTACAGTTGTAGCTTGCCATTGCAGGTGCTGTATTTCTCTGAATCCCTCGTGCCCACGGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547263.1
CDS CCA 90 bp CCTATGAGCCGGATTTCCTTGTGCAGCTCTTCAATGAGTGCCAACTaGTTGCCAGCATCCAGCTTCTGCAGGAATCCAGGAAAAAGCGAG +
Preference number: 5 (lower is better)
Translates to: PMSRISLCSSSMSAN*LPASSFCRNPGKSE
Trigger: CTCGCTTTTTCCTGGATTCCTGCAGAAGCTGGATGCTGGCAACCAGTTGGCACTCATTGAAGAGCTGCACAAGGAAATCCGGCTCATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549815.1
CDS-3UTR CAA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACCCTTTACACTGGCTGTaGTCACCTTCCCTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNPLHWL*SPSLQN
Trigger: GTTTTGCAGGGAAGGTGACAACAGCCAGTGTAAAGG...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAAAAGTGCCCAAAGCCTaGAGCCTAGAGGGCATGACA +
Preference number: 5 (lower is better)
Translates to: KRLVAPALKPELKHRRRGKVPKA*SLEGMT
Trigger: TGTCATGCCCTCTAGGCTCAAGGCTTTGGGCACTTT...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCGCATCTTGAGGAGGTaGACAATTGCCTGGTCGCTG +
Preference number: 5 (lower is better)
Translates to: FQTAFQTYTPPQTWELPERILRR*TIAWSL
Trigger: CAGCGACCAGGCAATTGTCAACCTCCTCAAGATGCG...CTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp ACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGTCACCCTGCCGCATCTaGAGGAGGTTGACAATTGCC +
Preference number: 5 (lower is better)
Translates to: TRDIGKRLVAPALKPELKSPCRI*RRLTIA
Trigger: GGCAATTGTCAACCTCCTCAAGATGCGGCAGGGTGA...CTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTAGGTACTTCGGAGGCTaGACTTTGCTCATCAGGATG +
Preference number: 5 (lower is better)
Translates to: SNSLSNLYPSPDLGTARARYFGG*TLLIRM
Trigger: CATCCTGATGAGCAAAGTCAAGCCTCCGAAGTACCT...AGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCCATTTCCTGGGCCAGTaGTTCAGTGTCGGTGACATC +
Preference number: 5 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAAHFLGQ*FSVGDI
Trigger: GATGTCACCGACACTGAACAACTGGCCCAGGAAATG...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGAGCACCTCCGTAAGCTaGGGCACAATGTTGGGTAGA +
Preference number: 5 (lower is better)
Translates to: FQTAFQTYTPPQTWELPESTSVS*GTMLGR
Trigger: TCTACCCAACATTGTGCCCAAGCTTACGGAGGTGCT...CTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCGGTGCAATGTCCACTTaGCTGGCTGTAGCCACGATT +
Preference number: 5 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAAGAMST*LAVATI
Trigger: AATCGTGGCTACAGCCAGCAAAGTGGACATTGCACC...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CTGTGCCCCACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCATCATCAGCAAGAGCTTaGAGGATACAGGGGATGATG +
Preference number: 5 (lower is better)
Translates to: LCPTRDIGKRLVAPALKPSSARA*RIQGMM
Trigger: CATCATCCCCTGTATCCTCAAAGCTCTTGCTGATGA...TGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGTGGGGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGAGCTGTGAAATGAGCCGGATTTCCTaGTGCAGCTCTTCAATGAGT +
Preference number: 5 (lower is better)
Translates to: QPFKPIPLPRLGNCQSCEMSRIS*CSSSMS
Trigger: ACTCATTGAAGAGCTGCACAAGGAAATCCGGCTCAT...TTCACAGCTCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAGCAGTGGGTCCTTATTaGCCCACCAGATCATCTTCT +
Preference number: 5 (lower is better)
Translates to: KRLVAPALKPELKHRRRGAVGPY*PTRSSS
Trigger: AGAAGATGATCTGGTGGGCAAATAAGGACCCACTGC...TCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp ACACCACACTGGGCAGAGATCCACCGTCTGTGCCCCACTCGGGATATAGGAAAAGATATAGGAAAAAGGTaGGTAGCGCCAGCTCTCAAA +
Preference number: 5 (lower is better)
Translates to: TPHWAEIHRLCPTRDIGKDIGKR*VAPALK
Trigger: TTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATC...TTTTCCTATATCCCGAGTGGGGCACAGACGGTGGATCTCTGCCCAGTGTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp ATCATCCTCAGAGGCAGTTTCTGTGGTCATCTTCCCAGTGACTCCTaGGATGTGAAACAGGAGATCCCCAAGGAGCTGAACAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: IILRGSFCGHLPSDS*DVKQEIPKELNRAE
Trigger: TTCAGCTCTGTTCAGCTCCTTGGGGATCTCCTGTTTCACATCTCAGGAGTCACTGGGAAGATGACCACAGAAACTGCCTCTGAGGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GGGAGGCTGCATCTCTATATCGATGCAGAGTCAAGCAGAACAATTTaGAGAGCCCCTTCACTGCTCCCTCTGGAAGATCTTTTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: GRLHLYIDAESSRTI*RAPSLLPLEDLFQQ
Trigger: TTGCTGGAAAAGATCTTCCAGAGGGAGCAGTGAAGGGGCTCTGCAAATTGTTCTGCTTGACTCTGCATCGATATAGAGATGCAGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp TTTCTCATCCACAATCAACTGCCAGAAACTGCTCAGTTTGGCCTCTaGAAGAAACAAAAGGTTACCCCACGACGCAGCTCACCACATCCC +
Preference number: 5 (lower is better)
Translates to: FLIHNQLPETAQFGL*KKQKVTPRRSSPHP
Trigger: GGGATGTGGTGAGCTGCGTCGTGGGGTAACCTTTTGTTTCTTGCAGAGGCCAAACTGAGCAGTTTCTGGCAGTTGATTGTGGATGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551549.1
CDS CCA 90 bp AAGGACTTCTGTATGGTGGGCAGTATCAGATCCTTAAATTCTGAGTaGGACAGGTATCGGAGCAGAGGGGCACAGCTATCCAACAGGTAC +
Preference number: 5 (lower is better)
Translates to: KDFCMVGSIRSLNSE*DRYRSRGAQLSNRY
Trigger: GTACCTGTTGGATAGCTGTGCCCCTCTGCTCCGATACCTGTCCCACTCAGAATTTAAGGATCTGATACTGCCCACCATACAGAAGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCTGGTGTAGTCAGCCTTaGAGCGGGAACAGTAGATGT +
Preference number: 5 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAAWCSQP*SGNSRC
Trigger: ACATCTACTGTTCCCGCTCAAAGGCTGACTACACCA...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp CTCCCTCTGGAAGATCTTTTCCAGCAACACACTTCCCAAGTTCACTaGGGATTTCTCTCCGTTCCTTTACACTGGCTGTTGTCACCTTCC +
Preference number: 5 (lower is better)
Translates to: LPLEDLFQQHTSQVH*GFLSVPLHWLLSPS
Trigger: GGAAGGTGACAACAGCCAGTGTAAAGGAACGGAGAGAAATCCTCAGTGAACTTGGGAAGTGTGTTGCTGGAAAAGATCTTCCAGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp CAAAGTTATCATCCTCAGAGGCAGTTTCTGTGGTCATCTTCCCAGTaGCTCCTGAGATGTGAAACAGGAGATCCCCAAGGAGCTGAACAG +
Preference number: 5 (lower is better)
Translates to: QSYHPQRQFLWSSSQ*LLRCETGDPQGAEQ
Trigger: CTGTTCAGCTCCTTGGGGATCTCCTGTTTCACATCTCAGGAGTCACTGGGAAGATGACCACAGAAACTGCCTCTGAGGATGATAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GGGCAGGTAGTTAAACATCATAATGTAGCCATCTCGGACATGGGGTaGAATGTCCACTTTGCTGGCTGTAGCCACGATTTCTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: GQVVKHHNVAISDMG*NVHFAGCSHDFWHQ
Trigger: TTGATGCCAGAAATCGTGGCTACAGCCAGCAAAGTGGACATTGCACCCCATGTCCGAGATGGCTACATTATGATGTTTAACTACCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp CTTTCAAACAGCCTTTCAAACCTATACCCCTCCCCAGACTTGGGAACTGCCAGATGCACTTCCACCAGTTaGTTCCAGATGTCTCCTTGT +
Preference number: 5 (lower is better)
Translates to: LSNSLSNLYPSPDLGTARCTSTS*FQMSPC
Trigger: ACAAGGAGACATCTGGAACAAACTGGTGGAAGTGCA...TCTGGCAGTTCCCAAGTCTGGGGAGGGGTATAGGTTTGAAAGGCTGTTTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGCACAGGAGAAGAGGAACAGGCTGAAAGCTTTTTaGAACCATTCAGTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: KVGSASSQTRAQAQEKRNRLKAF*NHSVSF
Trigger: GAAGCTCACTGAATGGTTCAAAAAAGCTTTCAGCCT...GTTCCTCTTCTCCTGTGCTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp ACTCGGGATATAGGAAAAAGGTTGGTAGCGCCAGCTCTCAAACCAGAGCTCAAGACGGTGTTCTTATCCTaGGTGTTGTCAAGAAGAGCC +
Preference number: 5 (lower is better)
Translates to: TRDIGKRLVAPALKPELKTVFLS*VLSRRA
Trigger: GGCTCTTCTTGACAACACCAAGGATAAGAACACCGT...CTTGAGCTCTGGTTTGAGAGCTGGCGCTACCAACCTTTTTCCTATATCCCGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 90 bp AAGGACTTCTGTATGGTGGGCAGTATCAGATCCTTAAATTCTGAGTaGGACAGGTATCGGAGCAGAGGGGCACAGCTATCCTACAAAGAA +
Preference number: 5 (lower is better)
Translates to: KDFCMVGSIRSLNSE*DRYRSRGAQLSYKE
Trigger: TTCTTTGTAGGATAGCTGTGCCCCTCTGCTCCGATACCTGTCCCACTCAGAATTTAAGGATCTGATACTGCCCACCATACAGAAGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548821.1
CDS-3UTR CAA 90 bp TTAAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTACACACAAAGCCTTCCTaGCCGTGGGCACGAGGGATT +
Preference number: 5 (lower is better)
Translates to: LKYFLGTPSSKLPIGTNVHTKPS*PWARGI
Trigger: AATCCCTCGTGCCCACGGCAAGGAAGGCTTTGTGTG...TACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp ATTATAGTTCCAGACCTAGCCATGCTAAACTGGACAAACAGCTCCTGGGCTGCCTTCTTATCCTTGGTGTaGTCAAGAAGAGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: IIVPDLAMLNWTNSSWAAFLSLV*SRRAFR
Trigger: CCTGAAGGCTCTTCTTGACAACACCAAGGATAAGAA...GGCAGCCCAGGAGCTGTTTGTCCAGTTTAGCATGGCTAGGTCTGGAACTATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 90 bp TCCTTTCACGATGTCCATGGCATACTGGCTGAGGTCAAGCGTCACTaGTGCCAGCAGACTAGAAATAGTTTCAATAACATTCTCTGGACT +
Preference number: 5 (lower is better)
Translates to: SFHDVHGILAEVKRH*CQQTRNSFNNILWT
Trigger: AGTCCAGAGAATGTTATTGAAACTATTTCTAGTCTGCTGGCATCAGTGACGCTTGACCTCAGCCAGTATGCCATGGACATCGTGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548821.1
CDS GCA 90 bp AATTTCTCAGAAGTGAAAACCTGCTTTTTCTCATCCACAATCAACTaGCAGAAACTGCTCAGTTTGGCCTCAGCCTGTGAGTCAGCCACT +
Preference number: 5 (lower is better)
Translates to: NFSEVKTCFFSSTIN*QKLLSLASACESAT
Trigger: AGTGGCTGACTCACAGGCTGAGGCCAAACTGAGCAGTTTCTGGCAGTTGATTGTGGATGAGAAAAAGCAGGTTTTCACTTCTGAGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTATTACAATGGGCTTCACTTaGGGGTCACTCTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: KILSGNAIFQAPHWNKCITMGFT*GSLLSR
Trigger: CCTGGACAAGAGTGACCCCAAAGTGAAGCCCATTGT...AATACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TTAAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTAATGAAGTGGACAAACTaGGTGTCCAGCAGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: LKYFLGTPSSKLPIGTNVMKWTN*VSSRVC
Trigger: GCAGACCCTGCTGGACACCAAGTTTGTCCACTTCAT...TACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 90 bp GCATCCTCTGAAGCCATGACCAGGAATTTCTCAGAAGTGAAAACCTaGTTTTTCTCATCCACAATCAACTGCCAGAAACTGCTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: ASSEAMTRNFSEVKT*FFSSTINCQKLLSL
Trigger: CAAACTGAGCAGTTTCTGGCAGTTGATTGTGGATGAGAAAAAGCAGGTTTTCACTTCTGAGAAATTCCTGGTCATGGCTTCAGAGGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000551549.1
CDS-3UTR CAA 90 bp AAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTATTATGAGTGCCAACTGGTaGCCAGCATCCAGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: KILSGNAIFQAPHWNKCIMSANW*PASSFL
Trigger: TAAGAAGCTGGATGCTGGCAACCAGTTGGCACTCAT...AATACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TTAAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTATTCGGAGGCTTGACTTaGCTCATCAGGATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LKYFLGTPSSKLPIGTNVFGGLT*LIRMFF
Trigger: GAAGAACATCCTGATGAGCAAAGTCAAGCCTCCGAA...TACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp AAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTATTGAAGTTCTTCTTATCTaGGATGGCATCAGTCAGTGC +
Preference number: 5 (lower is better)
Translates to: KILSGNAIFQAPHWNKCIEVLLI*DGISQC
Trigger: GCACTGACTGATGCCATCCAAGATAAGAAGAACTTC...AATACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS-3UTR CAA 90 bp TTAAAATACTTTCTGGGAACGCCATCTTCCAAGCTCCCCATTGGAACAAATGTATCAGACCTCACAATATaGAAAAGCCAAGCCAGACAC +
Preference number: 5 (lower is better)
Translates to: LKYFLGTPSSKLPIGTNVSDLTI*KSQARH
Trigger: GTGTCTGGCTTGGCTTTTCAATATTGTGAGGTCTGA...TACATTTGTTCCAATGGGGAGCTTGGAAGATGGCGTTCCCAGAAAGTATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GAACTGTCTGCTGAGCCTGCCTGCGGACGTGCCAGGTaGGGCTCAGGAGCACCGCCACCAGAGCCCGGTGGT +
Preference number: 6 (lower is better)
Translates to: ELSAEPACGRAR*GSGAPPPEPGG
Trigger: ACCACCGGGCTCTGGTGGCGGTGCTCCTGAGCCGCACCTGGCACGTCCGCAGGCAGGCTCAGCAGACAGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CCTGCCCATAACCTCCGCCGCCTGCCGCTGGTAACGTaGCACTGCTTGGGAGAGGGCTTCGGCCCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: PAHNLRRLPLVT*HCLGEGFGPCL
Trigger: CAGGCAGGGGCCGAAGCCCTCTCCCAAGCAGTGGCACGTTACCAGCGGCAGGCGGCGGAGGTTATGGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548132.1
CDS CAA 90 bp CCTGCCCATAACCTCCGCCGCCTGCCGCTGGTAACGTGCCACTGCTaGGGAGAGGGCTTCGGCCCCTGCCTGCCTTACAGCCGCCTCATG +
Preference number: 6 (lower is better)
Translates to: PAHNLRRLPLVTCHC*GEGFGPCLPYSRLM
Trigger: CATGAGGCGGCTGTAAGGCAGGCAGGGGCCGAAGCCCTCTCCCAAGCAGTGGCACGTTACCAGCGGCAGGCGGCGGAGGTTATGGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548132.1
CDS CAA 72 bp AACCTCCGCCGCCTGCCGCTGGTAACGTGCCACTGCTaGGGAGAGGGCTTCGGCCCCTGCCTGCCTTACAGC +
Preference number: 6 (lower is better)
Translates to: NLRRLPLVTCHC*GEGFGPCLPYS
Trigger: GCTGTAAGGCAGGCAGGGGCCGAAGCCCTCTCCCAAGCAGTGGCACGTTACCAGCGGCAGGCGGCGGAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548132.1
CDS TCA 72 bp CCCCCAAGAGAGGACAGCAGCTTCCGAACTGTCTGCTaGGCCTGCCTGCGGACGTGCCAGGTGCGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: PPREDSSFRTVC*ACLRTCQVRLR
Trigger: CCTGAGCCGCACCTGGCACGTCCGCAGGCAGGCTCAGCAGACAGTTCGGAAGCTGCTGTCCTCTCTTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CGCCTCCGGACCTGCGCCTCCCTGTCTAGCTGGGCCTaGAGCATCTCCTTCTGCTTGCTGGTCAGCTGCACC +
Preference number: 6 (lower is better)
Translates to: RLRTCASLSSWA*SISFCLLVSCT
Trigger: GGTGCAGCTGACCAGCAAGCAGAAGGAGATGCTGCAGGCCCAGCTAGACAGGGAGGCGCAGGTCCGGAGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS GCA 72 bp CATAACCTCCGCCGCCTGCCGCTGGTAACGTGCCACTaGTTGGGAGAGGGCTTCGGCCCCTGCCTGCCTTAC +
Preference number: 6 (lower is better)
Translates to: HNLRRLPLVTCH*LGEGFGPCLPY
Trigger: GTAAGGCAGGCAGGGGCCGAAGCCCTCTCCCAAGCAGTGGCACGTTACCAGCGGCAGGCGGCGGAGGTTATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548132.1
CDS CCA 72 bp TGCAGCCGCCTCCGGACCTGCGCCTCCCTGTCTAGCTaGGCCTGCAGCATCTCCTTCTGCTTGCTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: CSRLRTCASLSS*ACSISFCLLVS
Trigger: GCTGACCAGCAAGCAGAAGGAGATGCTGCAGGCCCAGCTAGACAGGGAGGCGCAGGTCCGGAGGCGGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS CCA 72 bp GTTCCATCAGCCCCCGGAGCACGGTTTCCCGCACGCTaGCACACGGGGACTGCAAGGCACAGAGCAGCACGT +
Preference number: 6 (lower is better)
Translates to: VPSAPGARFPAR*HTGTARHRAAR
Trigger: ACGTGCTGCTCTGTGCCTTGCAGTCCCCGTGTGCCAGCGTGCGGGAAACCGTGCTCCGGGGGCTGATGGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000551920.1
CDS TCA 72 bp TGTACTGGGTCAGGCCGGACGGGTTCTTGGCCAGGATaGTGTCCAGCAGTCCAAGCGCCGCCTCCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: CTGSGRTGSWPG*CPAVQAPPPAP
Trigger: GGGAGCTGGAGGCGGCGCTTGGACTGCTGGACATCATCCTGGCCAAGAACCCGTCCGGCCTGACCCAGTACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS GCA 72 bp GTGCCGCCATCATCTCCTGTTGCTTCAGCGAGAGGATaGCCAGGCCCTTCACCAGGCCCGCCAGGCCATAGG +
Preference number: 6 (lower is better)
Translates to: VPPSSPVASARG*PGPSPGPPGHR
Trigger: CCTATGGCCTGGCGGGCCTGGTGAAGGGCCTGGGCATCCTCTCGCTGAAGCAACAGGAGATGATGGCGGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GCCCAGGCCTCTCATGTCAGGATGGTGTCGTCCACCTaGTCCGTGGAGTCGGCCTGGCTGGCCAGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: AQASHVRMVSST*SVESAWLASFF
Trigger: GAAGAAGCTGGCCAGCCAGGCCGACTCCACGGAGCAGGTGGACGACACCATCCTGACATGAGAGGCCTGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp CCCAGCTCTCCTCCAGAACCACAGGGCTGGAGTCATTaGAGAGGCGGATCAGGCCCGAGACCAGGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: PSSPPEPQGWSH*RGGSGPRPGSA
Trigger: TGCGGAGCCTGGTCTCGGGCCTGATCCGCCTCTTCAATGACTCCAGCCCTGTGGTTCTGGAGGAGAGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp GCAACTGCCCTCCGCCTGTCTCGATGTGGTGTCTCATaGGAAAGCCCATGCCCCGGACCCCGCTCACCGCAA +
Preference number: 6 (lower is better)
Translates to: ATALRLSRCGVS*ESPCPGPRSPQ
Trigger: TTGCGGTGAGCGGGGTCCGGGGCATGGGCTTTCTCATGAGACACCACATCGAGACAGGCGGAGGGCAGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp AGGCAGGAAACTAGCCGCAGCTACCCTGAGCCACCGTaGGCCCCGAGATTCCTGTCTGGAGCAGTAGCGGGG +
Preference number: 6 (lower is better)
Translates to: RQETSRSYPEPP*APRFLSGAVAG
Trigger: CCCCGCTACTGCTCCAGACAGGAATCTCGGGGCTCACGGTGGCTCAGGGTAGCTGCGGCTAGTTTCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548132.1
CDS GCA 72 bp GGCTTCTGGCTGGGCCTCAGCCAACTGCTGGATGGCTaGCTGCAAGGCCCTGCGGGAGGCTGCATCTCTATA +
Preference number: 6 (lower is better)
Translates to: GFWLGLSQLLDG*LQGPAGGCISI
Trigger: TATAGAGATGCAGCCTCCCGCAGGGCCTTGCAGGCAGCCATCCAGCAGTTGGCTGAGGCCCAGCCAGAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp AACTCCTCCCGCGTCACCAGGCGCAGTGCAGGGTTCTaGACGGAGGCAGTGATGGTGCTGATGAGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: NSSRVTRRSAGF*TEAVMVLMSCG
Trigger: CCCACAGCTCATCAGCACCATCACTGCCTCCGTGCAGAACCCTGCACTGCGCCTGGTGACGCGGGAGGAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000550471.1
CDS GCA 72 bp CTCCCCCATGCCCTTCACCATGGCCCCAAGGGCCTTTaGAGATACGGTCCGCACCTCAGGCACAGGGTCCAA +
Preference number: 6 (lower is better)
Translates to: LPHALHHGPKGL*RYGPHLRHRVQ
Trigger: TTGGACCCTGTGCCTGAGGTGCGGACCGTATCTGCAAAGGCCCTTGGGGCCATGGTGAAGGGCATGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp ACATTCACAGCCACGGAAAGTGCCAGGCTCCGCCCGTaGCGAACCATCCAGTCAATGCCGGACACGTCCGCC +
Preference number: 6 (lower is better)
Translates to: TFTATESARLRP*RTIQSMPDTSA
Trigger: GGCGGACGTGTCCGGCATTGACTGGATGGTTCGGCACGGGCGGAGCCTGGCACTTTCCGTGGCTGTGAATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp AGCCCGTCCCGATCACCCAAGTCAGAAGACGCAGCATaGCCACGCGAGGCAGCAACTCCGGGCCATTCTCGT +
Preference number: 6 (lower is better)
Translates to: SPSRSPKSEDAA*PREAATPGHSR
Trigger: ACGAGAATGGCCCGGAGTTGCTGCCTCGCGTGGCCATGCTGCGTCTTCTGACTTGGGTGATCGGGACGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp CCCTCCAGCATCCTCCTTGATGGCTGGCACAAGGGGTaGCAAGCAGCTGGCTACGGACTCCTGGACCTGCTG +
Preference number: 6 (lower is better)
Translates to: PSSILLDGWHKG*QAAGYGLLDLL
Trigger: CAGCAGGTCCAGGAGTCCGTAGCCAGCTGCTTGCCACCCCTTGTGCCAGCCATCAAGGAGGATGCTGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp GCGATGGCTGTCTCAGCGTACATGGAGATAACCCGCTaGCCCGCGCGCAGGGCGGTGTCACGCACAAACTCA +
Preference number: 6 (lower is better)
Translates to: AMAVSAYMEITR*PARRAVSRTNS
Trigger: TGAGTTTGTGCGTGACACCGCCCTGCGCGCGGGCCAGCGGGTTATCTCCATGTACGCTGAGACAGCCATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp AGTTTGGCCGGCAACTGCCCTCCGCCTGTCTCGATGTaGTGTCTCATGAGAAAGCCCATGCCCCGGACCCCG +
Preference number: 6 (lower is better)
Translates to: SLAGNCPPPVSM*CLMRKPMPRTP
Trigger: CGGGGTCCGGGGCATGGGCTTTCTCATGAGACACCACATCGAGACAGGCGGAGGGCAGTTGCCGGCCAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp AGCCCGTCCCGATCACCCAAGTCAGAAGACGCAGCATaGCCACGCGAGGCAGCAACTCCGGGCCATTCTAGG +
Preference number: 6 (lower is better)
Translates to: SPSRSPKSEDAA*PREAATPGHSR
Trigger: CCTAGAATGGCCCGGAGTTGCTGCCTCGCGTGGCCATGCTGCGTCTTCTGACTTGGGTGATCGGGACGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551920.1
CDS CAA 90 bp GAGTCGACCAAAACAGGGATGTACTGGGTCAGGCCGGACGGGTTCTaGGCCAGGATGATGTCCAGCAGTCCAAGCGCCGCCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: ESTKTGMYWVRPDGF*ARMMSSSPSAASSS
Trigger: GGAGCTGGAGGCGGCGCTTGGACTGCTGGACATCATCCTGGCCAAGAACCCGTCCGGCCTGACCCAGTACATCCCTGTTTTGGTCGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS CAA 90 bp TTTAGGGCATCCCAGCTCTCCTCCAGAACCACAGGGCTGGAGTCATaGAAGAGGCGGATCAGGCCCGAGACCAGGCTCCGCAGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: FRASQLSSRTTGLES*KRRIRPETRLRRWL
Trigger: CAGCCACCTGCGGAGCCTGGTCTCGGGCCTGATCCGCCTCTTCAATGACTCCAGCCCTGTGGTTCTGGAGGAGAGCTGGGATGCCCTAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp AGGGCCAGCATGACCGCTGGGAGGATCACGCCAAGATaGCGGGTGAGGGCATCACCAGCCACTGACGAAAGG +
Preference number: 6 (lower is better)
Translates to: RASMTAGRITPR*RVRASPATDER
Trigger: CCTTTCGTCAGTGGCTGGTGATGCCCTCACCCGTCATCTTGGCGTGATCCTCCCAGCGGTCATGCTGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GGTGCTTGGTCAGGGATTCCATGGCCGAAGAGTCACTaGACTGGCGTGCCAGGTTCCGCAGTGCCAGCACAG +
Preference number: 6 (lower is better)
Translates to: GAWSGIPWPKSH*TGVPGSAVPAQ
Trigger: CTGTGCTGGCACTGCGGAACCTGGCACGCCAGTGCAGTGACTCTTCGGCCATGGAATCCCTGACCAAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp TCCTCCAGAGCCTGGTGGCCGATGGTGGAATGCAGCTaGTCGAAAGTCTTGGCTGCCGCCTCTCTGACCTCC +
Preference number: 6 (lower is better)
Translates to: SSRAWWPMVECS*SKVLAAASLTS
Trigger: GGAGGTCAGAGAGGCGGCAGCCAAGACTTTCGAGCAGCTGCATTCCACCATCGGCCACCAGGCTCTGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS CCA 72 bp GGACCCGGTCCGGCGACAGGACGGAAAGGGAGCCCATaGCATTCATGGAGGACTGGTTTAGGGGACTCTGTG +
Preference number: 6 (lower is better)
Translates to: GPGPATGRKGSP*HSWRTGLGDSV
Trigger: CACAGAGTCCCCTAAACCAGTCCTCCATGAATGCCATGGGCTCCCTTTCCGTCCTGTCGCCGGACCGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp TTCCGCGTGTCCGTGGAACGGTCCTGGAAGGCTCTCTaGACAATGGGCATGATGAGGGCCAGGGATGGGGCA +
Preference number: 6 (lower is better)
Translates to: FRVSVERSWKAL*TMGMMRARDGA
Trigger: TGCCCCATCCCTGGCCCTCATCATGCCCATTGTCCAGAGAGCCTTCCAGGACCGTTCCACGGACACGCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp GGCGGATCAGGCCCGAGACCAGGCTCCGCAGGTGGCTaGTGTAGTCAGCCTTTGAGCGGGAACAGTAGATGT +
Preference number: 6 (lower is better)
Translates to: GGSGPRPGSAGG*CSQPLSGNSRC
Trigger: ACATCTACTGTTCCCGCTCAAAGGCTGACTACACCAGCCACCTGCGGAGCCTGGTCTCGGGCCTGATCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp AGGATGGTGTCGTCCACCTGCTCCGTGGAGTCGGCCTaGCTGGCCAGCTTCTTCAGGGACCTTCGGTTAACC +
Preference number: 6 (lower is better)
Translates to: RMVSSTCSVESA*LASFFRDLRLT
Trigger: GGTTAACCGAAGGTCCCTGAAGAAGCTGGCCAGCCAGGCCGACTCCACGGAGCAGGTGGACGACACCATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp TCCAGAGCCTGGTGGCCGATGGTGGAATGCAGCTGCTCGAAAGTCTaGGCTGCCGCCTCTCTGACCTCCTCCAGTGGGTCACACAAAGCC +
Preference number: 6 (lower is better)
Translates to: SRAWWPMVECSCSKV*AAASLTSSSGSHKA
Trigger: GGCTTTGTGTGACCCACTGGAGGAGGTCAGAGAGGCGGCAGCCAAGACTTTCGAGCAGCTGCATTCCACCATCGGCCACCAGGCTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS GCA 72 bp CGAAGAGTCACTGCACTGGCGTGCCAGGTTCCGCAGTaGCAGCACAGCTTCATCCATCAGGCGGGGACTGTT +
Preference number: 6 (lower is better)
Translates to: RRVTALACQVPQ*QHSFIHQAGTV
Trigger: AACAGTCCCCGCCTGATGGATGAAGCTGTGCTGGCACTGCGGAACCTGGCACGCCAGTGCAGTGACTCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CCTGCAACAGCGTGTCACCCCGGTAAGAGGCCAACATaGACTGCAGGTAGGCATGCCTCACCGCAGATGTGG +
Preference number: 6 (lower is better)
Translates to: PATACHPGKRPT*TAGRHASPQMW
Trigger: CCACATCTGCGGTGAGGCATGCCTACCTGCAGTGCATGTTGGCCTCTTACCGGGGTGACACGCTGTTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GTAACGTGCCACTGCTTGGGAGAGGGCTTCGGCCCCTaGCTGCCTTACAGCCGCCTCATGATAGATCACGTC +
Preference number: 6 (lower is better)
Translates to: VTCHCLGEGFGP*LPYSRLMIDHV
Trigger: GACGTGATCTATCATGAGGCGGCTGTAAGGCAGGCAGGGGCCGAAGCCCTCTCCCAAGCAGTGGCACGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548132.1
CDS GCA 72 bp GCCAGGATCTCCGGGTTCCTGATAACGGAGCCGATCTaGCTGAGCGCCTGCTGTCCAGCCTTCTGGACTTTG +
Preference number: 6 (lower is better)
Translates to: ARISGFLITEPI*LSACCPAFWTL
Trigger: CAAAGTCCAGAAGGCTGGACAGCAGGCGCTCAGGCAGATCGGCTCCGTTATCAGGAACCCGGAGATCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GCCACGGCAGCAAGTCCTCAAAGCACGACTCCCCCATaGCCTTCACCATGGCCCCAAGGGCCTTTGCAGATA +
Preference number: 6 (lower is better)
Translates to: ATAASPQSTTPP*PSPWPQGPLQI
Trigger: TATCTGCAAAGGCCCTTGGGGCCATGGTGAAGGGCATGGGGGAGTCGTGCTTTGAGGACTTGCTGCCGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp TTGGAGACAACAATCTTCCAGACATGCAGGGACGCCTaGCGCACCACCAGCTGGGTGTCTGAGCGGCCCATG +
Preference number: 6 (lower is better)
Translates to: LETTIFQTCRDA*RTTSWVSERPM
Trigger: CATGGGCCGCTCAGACACCCAGCTGGTGGTGCGGCAGGCGTCCCTGCATGTCTGGAAGATTGTTGTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CGGGTGGCCTCCAGCAGATCCTCGATGATGATCCGGTaGCCTGTGTCATCCTCTACGGAGAGGATCACAGCC +
Preference number: 6 (lower is better)
Translates to: RVASSRSSMMIR*PVSSSTERITA
Trigger: GGCTGTGATCCTCTCCGTAGAGGATGACACAGGGCACCGGATCATCATCGAGGATCTGCTGGAGGCCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GGCCTGGGGGTCCAGGGGAGGCAGTGGGTCCTTATTTaGCCACCAGATCATCTTCTCAGCCACCAGCCTGAT +
Preference number: 6 (lower is better)
Translates to: GLGVQGRQWVLI*PPDHLLSHQPD
Trigger: ATCAGGCTGGTGGCTGAGAAGATGATCTGGTGGGCAAATAAGGACCCACTGCCTCCCCTGGACCCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp GTGAGTTTCTTCACAGCACCATCCACGGCGTGCTTGTaGGAGCCACCCAGCACCTCCAGCAAGAGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: VSFFTAPSTACL*EPPSTSSKSRH
Trigger: GTGCCTGCTCTTGCTGGAGGTGCTGGGTGGCTCCCACAAGCACGCCGTGGATGGTGCTGTGAAGAAACTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp GAGCCGATCTGCCTGAGCGCCTGCTGTCCAGCCTTCTaGACTTTGACATGGGAGTCGGTCAGCACCTCCGTA +
Preference number: 6 (lower is better)
Translates to: EPICLSACCPAF*TLTWESVSTSV
Trigger: TACGGAGGTGCTGACCGACTCCCATGTCAAAGTCCAGAAGGCTGGACAGCAGGCGCTCAGGCAGATCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp GAAAGTCTTGGCTGCCGCCTCTCTGACCTCCTCCAGTaGGTCACACAAAGCCTTCCTTGCCGTGGGCACGAG +
Preference number: 6 (lower is better)
Translates to: ESLGCRLSDLLQ*VTQSLPCRGHE
Trigger: CTCGTGCCCACGGCAAGGAAGGCTTTGTGTGACCCACTGGAGGAGGTCAGAGAGGCGGCAGCCAAGACTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS CCA 72 bp GGTCCCAAGCTTTTCCTTCAGGGCCAGCATGACCGCTaGGAGGATCACGCCAAGATGACGGGTGAGGGCATC +
Preference number: 6 (lower is better)
Translates to: GPKLFLQGQHDR*EDHAKMTGEGI
Trigger: GATGCCCTCACCCGTCATCTTGGCGTGATCCTCCCAGCGGTCATGCTGGCCCTGAAGGAAAAGCTTGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp AAAACAGGGATGTACTGGGTCAGGCCGGACGGGTTCTaGGCCAGGATGATGTCCAGCAGTCCAAGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: KTGMYWVRPDGF*ARMMSSSPSAA
Trigger: GGCGGCGCTTGGACTGCTGGACATCATCCTGGCCAAGAACCCGTCCGGCCTGACCCAGTACATCCCTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS CAA 72 bp TGGTGGCCGATGGTGGAATGCAGCTGCTCGAAAGTCTaGGCTGCCGCCTCTCTGACCTCCTCCAGTGGGTCA +
Preference number: 6 (lower is better)
Translates to: WWPMVECSCSKV*AAASLTSSSGS
Trigger: TGACCCACTGGAGGAGGTCAGAGAGGCGGCAGCCAAGACTTTCGAGCAGCTGCATTCCACCATCGGCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS CAA 90 bp GGGGTGGAGAGGGCAGCGATGAGCTTGGCAACAATGGGCTTCACTTaGGGGTCACTCTTGTCCAGGTGCTTGGCCAGAGAGCCCATCAGG +
Preference number: 6 (lower is better)
Translates to: GVERAAMSLATMGFT*GSLLSRCLAREPIR
Trigger: CCTGATGGGCTCTCTGGCCAAGCACCTGGACAAGAGTGACCCCAAAGTGAAGCCCATTGTTGCCAAGCTCATCGCTGCCCTCTCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp AGCAGCTGCTGCATAAGCCTCTGGATCATCCCTCCAGCATCCTCCTaGATGGCTGGCACAAGGGGTGGCAAGCAGCTGGCTACGGACTCC +
Preference number: 6 (lower is better)
Translates to: SSCCISLWIIPPASS*MAGTRGGKQLATDS
Trigger: GGAGTCCGTAGCCAGCTGCTTGCCACCCCTTGTGCCAGCCATCAAGGAGGATGCTGGAGGGATGATCCAGAGGCTTATGCAGCAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp ACGGAGCCGATCTGCCTGAGCGCCTGCTGTCCAGCCTTCTGGACTTaGACATGGGAGTCGGTCAGCACCTCCGTAAGCTTGGGCACAATG +
Preference number: 6 (lower is better)
Translates to: TEPICLSACCPAFWT*TWESVSTSVSLGTM
Trigger: CATTGTGCCCAAGCTTACGGAGGTGCTGACCGACTCCCATGTCAAAGTCCAGAAGGCTGGACAGCAGGCGCTCAGGCAGATCGGCTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp GCAGCCAGTAAGGAGGGGAGCACCAGCTTCACCCCGTaGGCACTCAAGTTGCTCATCACAGCCTTGGCACAG +
Preference number: 6 (lower is better)
Translates to: AASKEGSTSFTP*ALKLLITALAQ
Trigger: CTGTGCCAAGGCTGTGATGAGCAACTTGAGTGCTCACGGGGTGAAGCTGGTGCTCCCCTCCTTACTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp TTCCGGATGACGGCATCCACTTTGGCCCCTGCTCCCTaGATCACAAACCTCAGGGCCTGCAGCATGGTGTCC +
Preference number: 6 (lower is better)
Translates to: FRMTASTLAPAP*ITNLRACSMVS
Trigger: GGACACCATGCTGCAGGCCCTGAGGTTTGTGATTCAGGGAGCAGGGGCCAAAGTGGATGCCGTCATCCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp GCAACGGGCAGATCAATGACCTGGGCACCAGGATTGTaGGGCAGGAAACTAGCCGCAGCTACCCTGAGCCAC +
Preference number: 6 (lower is better)
Translates to: ATGRSMTWAPGL*GRKLAAATLSH
Trigger: GTGGCTCAGGGTAGCTGCGGCTAGTTTCCTGCCTCACAATCCTGGTGCCCAGGTCATTGATCTGCCCGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548132.1
CDS TCA 72 bp TGCCAAGGCTGGCACTGGCAAGAGGTCCACCACACCTaGATGCCCCTAGCACTGGCTCCCCTTCTTTATGCC +
Preference number: 6 (lower is better)
Translates to: CQGWHWQEVHHT*MPLALAPLLYA
Trigger: GGCATAAAGAAGGGGAGCCAGTGCTAGGGGCATTCAGGTGTGGTGGACCTCTTGCCAGTGCCAGCCTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS GCA 72 bp CCTCAGCCAACTGCTGGATGGCTGCCTGCAAGGCCCTaGGGGAGGCTGCATCTCTATATCGATGCAGAGTCA +
Preference number: 6 (lower is better)
Translates to: PQPTAGWLPARP*GRLHLYIDAES
Trigger: TGACTCTGCATCGATATAGAGATGCAGCCTCCCGCAGGGCCTTGCAGGCAGCCATCCAGCAGTTGGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp AGCTTCGTGAGTTTCTTCACAGCACCATCCACGGCGTaGTTGTGGGAGCCACCCAGCACCTCCAGCAAGAGC +
Preference number: 6 (lower is better)
Translates to: SFVSFFTAPSTA*LWEPPSTSSKS
Trigger: GCTCTTGCTGGAGGTGCTGGGTGGCTCCCACAAGCACGCCGTGGATGGTGCTGTGAAGAAACTCACGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CAGGGATTCCATGGCCGAAGAGTCACTGCACTGGCGTaGCAGGTTCCGCAGTGCCAGCACAGCTTCATCCAT +
Preference number: 6 (lower is better)
Translates to: QGFHGRRVTALA*QVPQCQHSFIH
Trigger: ATGGATGAAGCTGTGCTGGCACTGCGGAACCTGGCACGCCAGTGCAGTGACTCTTCGGCCATGGAATCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CATAATGGCAAACTCCTCCCGCGTCACCAGGCGCAGTaGAGGGTTCTGCACGGAGGCAGTGATGGTGCTGAT +
Preference number: 6 (lower is better)
Translates to: HNGKLLPRHQAQ*RVLHGGSDGAD
Trigger: ATCAGCACCATCACTGCCTCCGTGCAGAACCCTGCACTGCGCCTGGTGACGCGGGAGGAGTTTGCCATTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000550471.1
CDS GCA 72 bp GACTGCAAGGCACAGAGCAGCACGTCCACCTCCTCCTaGTCTGCAAAGGCACAGCCATCATCACCACTGCTG +
Preference number: 6 (lower is better)
Translates to: DCKAQSSTSTSS*SAKAQPSSPLL
Trigger: CAGCAGTGGTGATGATGGCTGTGCCTTTGCAGAGCAGGAGGAGGTGGACGTGCTGCTCTGTGCCTTGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000551920.1
CDS GCA 72 bp TGGATGGCATCAGTCAGTGCCGCCATCATCTCCTGTTaGTTCAGCGAGAGGATGCCCAGGCCCTTCACCAGG +
Preference number: 6 (lower is better)
Translates to: WMASVSAAIISC*FSERMPRPFTR
Trigger: CCTGGTGAAGGGCCTGGGCATCCTCTCGCTGAAGCAACAGGAGATGATGGCGGCACTGACTGATGCCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GCCGATGGTGGAATGCAGCTGCTCGAAAGTCTTGGCTaGCGCCTCTCTGACCTCCTCCAGTGGGTCACACAA +
Preference number: 6 (lower is better)
Translates to: ADGGMQLLESLG*RLSDLLQWVTQ
Trigger: TTGTGTGACCCACTGGAGGAGGTCAGAGAGGCGGCAGCCAAGACTTTCGAGCAGCTGCATTCCACCATCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS GCA 72 bp AGGCACACAGTTCCCCTAGGCACCCGGCTGAGGAGATaGGAGTGTTGTCCTCATCGTGTCCCAGCATGCTCA +
Preference number: 6 (lower is better)
Translates to: RHTVPLGTRLRR*ECCPHRVPACS
Trigger: TGAGCATGCTGGGACACGATGAGGACAACACTCGCATCTCCTCAGCCGGGTGCCTAGGGGAACTGTGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GTGAGCAGAGACCCACCCAACCGCACACACCCAGACTaGATCAGGGCTGCACAGGTCACTCACGTAGAGCTT +
Preference number: 6 (lower is better)
Translates to: VSRDPPNRTHPD*IRAAQVTHVEL
Trigger: AAGCTCTACGTGAGTGACCTGTGCAGCCCTGATGCAGTCTGGGTGTGTGCGGTTGGGTGGGTCTCTGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548132.1
CDS GCA 72 bp GAGGACTGCCAGACAAACGCAGACATGGTCAGTGTGTaGCAAGGCTGGCACTGGCAAGAGGTCCACCACACC +
Preference number: 6 (lower is better)
Translates to: EDCQTNADMVSV*QGWHWQEVHHT
Trigger: GGTGTGGTGGACCTCTTGCCAGTGCCAGCCTTGGCACACACTGACCATGTCTGCGTTTGTCTGGCAGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS CCA 72 bp AGGACACACTCTGGCTTCAGCAGGCGCAGGGTCACGTaGCTCACCAAAGTGCCCAAAGCCTTGAGCCTAGAG +
Preference number: 6 (lower is better)
Translates to: RTHSGFSRRRVT*LTKVPKALSLE
Trigger: CTCTAGGCTCAAGGCTTTGGGCACTTTGGTGAGCCACGTGACCCTGCGCCTGCTGAAGCCAGAGTGTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS CCA 72 bp CTCTTCCTGGCACCAGGACTTATCCAGGACACACTCTaGCTTCAGCAGGCGCAGGGTCACGTGGCTCACCAA +
Preference number: 6 (lower is better)
Translates to: LFLAPGLIQDTL*LQQAQGHVAHQ
Trigger: TTGGTGAGCCACGTGACCCTGCGCCTGCTGAAGCCAGAGTGTGTCCTGGATAAGTCCTGGTGCCAGGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS CCA 72 bp CTGAGCGCCTGCTGTCCAGCCTTCTGGACTTTGACATaGGAGTCGGTCAGCACCTCCGTAAGCTTGGGCACA +
Preference number: 6 (lower is better)
Translates to: LSACCPAFWTLT*ESVSTSVSLGT
Trigger: TGTGCCCAAGCTTACGGAGGTGCTGACCGACTCCCATGTCAAAGTCCAGAAGGCTGGACAGCAGGCGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp GGTCCAAAAGCGATGCTTTCAGGCCAGGCGTCACGCTaGGCAGGTACGGAGCCAAGTCCTTCTGGTCTGTCA +
Preference number: 6 (lower is better)
Translates to: GPKAMLSGQASR*AGTEPSPSGLS
Trigger: TGACAGACCAGAAGGACTTGGCTCCGTACCTGCCCAGCGTGACGCCTGGCCTGAAAGCATCGCTTTTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp ATGGGAGAATGTCCTCCAGAGCCTGGTGGCCGATGGTaGAATGCAGCTGCTCGAAAGTCTTGGCTGCCGCCT +
Preference number: 6 (lower is better)
Translates to: MGECPPEPGGRW*NAAARKSWLPP
Trigger: AGGCGGCAGCCAAGACTTTCGAGCAGCTGCATTCCACCATCGGCCACCAGGCTCTGGAGGACATTCTCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS CCA 72 bp CCGGCGACAGGACGGAAAGGGAGCCCATGGCATTCATaGAGGACTGCCAGACAAACGCAGACATGGTCAGTG +
Preference number: 6 (lower is better)
Translates to: PATGRKGSPWHS*RTARQTQTWSV
Trigger: CACTGACCATGTCTGCGTTTGTCTGGCAGTCCTCCATGAATGCCATGGGCTCCCTTTCCGTCCTGTCGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS CAA 72 bp TTCGTGAGTTTCTTCACAGCACCATCCACGGCGTGCTaGTGGGAGCCACCCAGCACCTCCAGCAAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: FVSFFTAPSTAC*WEPPSTSSKSR
Trigger: CCTGCTCTTGCTGGAGGTGCTGGGTGGCTCCCACAAGCACGCCGTGGATGGTGCTGTGAAGAAACTCACGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp TCCTGGGCCAGTTGTTCAGTGTCGGTGACATCACCCTaGAGCCCTGGCACACCGGAGATGACACACAGAGCC +
Preference number: 6 (lower is better)
Translates to: SWASCSVSVTSP*SPGTPEMTHRA
Trigger: GGCTCTGTGTGTCATCTCCGGTGTGCCAGGGCTCAAGGGTGATGTCACCGACACTGAACAACTGGCCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp TCCCTGACACCTGGGTCCTCCATGGCGCGGATGCCATaGAGCAGCTCTGTGAAGAGGGGGTCCACCTTAATG +
Preference number: 6 (lower is better)
Translates to: SLTPGSSMARMP*SSSVKRGSTLM
Trigger: CATTAAGGTGGACCCCCTCTTCACAGAGCTGCTCAATGGCATCCGCGCCATGGAGGACCCAGGTGTCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp CCCCTAGCACTGGCTCCCCTTCTTTATGCCACTGCCTaGTTACTCCTGGGCAATGCCCATCACAGTGGCCGG +
Preference number: 6 (lower is better)
Translates to: PLALAPLLYATA*LLLGNAHHSGR
Trigger: CCGGCCACTGTGATGGGCATTGCCCAGGAGTAACAAGGCAGTGGCATAAAGAAGGGGAGCCAGTGCTAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS CAA 90 bp ATCAGCATTTCCTGGGCCAGTTGTTCAGTGTCGGTGACATCACCCTaGAGCCCTGGCACACCGGAGATGACACACAGAGCCTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: ISISWASCSVSVTSP*SPGTPEMTHRASCR
Trigger: CCTGCAGGAGGCTCTGTGTGTCATCTCCGGTGTGCCAGGGCTCAAGGGTGATGTCACCGACACTGAACAACTGGCCCAGGAAATGCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp GCAGCGATGAGCTTGGCAACAATGGGCTTCACTTTGGGGTCACTCTaGTCCAGGTGCTTGGCCAGAGAGCCCATCAGGACCACCACACTC +
Preference number: 6 (lower is better)
Translates to: AAMSLATMGFTLGSL*SRCLAREPIRTTTL
Trigger: GAGTGTGGTGGTCCTGATGGGCTCTCTGGCCAAGCACCTGGACAAGAGTGACCCCAAAGTGAAGCCCATTGTTGCCAAGCTCATCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp GGCAGGTACGGAGCCAAGTCCTTCTGGTCTGTCAGGGAGTACATGTaGCCAATAATCTGGGCTGCCATCTTCCGCGTGTCCGTGGAACGG +
Preference number: 6 (lower is better)
Translates to: GRYGAKSFWSVREYM*PIIWAAIFRVSVER
Trigger: CCGTTCCACGGACACGCGGAAGATGGCAGCCCAGATTATTGGCAACATGTACTCCCTGACAGACCAGAAGGACTTGGCTCCGTACCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp AGCATGGTGTCCCTGACACCTGGGTCCTCCATGGCGCGGATGCCATaGAGCAGCTCTGTGAAGAGGGGGTCCACCTTAATGTGGATGGAA +
Preference number: 6 (lower is better)
Translates to: SMVSLTPGSSMARMP*SSSVKRGSTLMWME
Trigger: TTCCATCCACATTAAGGTGGACCCCCTCTTCACAGAGCTGCTCAATGGCATCCGCGCCATGGAGGACCCAGGTGTCAGGGACACCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp GACCAGGCTCCGCAGGTGGCTGGTGTAGTCAGCCTTTaGGCGGGAACAGTAGATGTTGAGGATGATGGCAGC +
Preference number: 6 (lower is better)
Translates to: DQAPQVAGVVSL*AGTVDVEDDGS
Trigger: GCTGCCATCATCCTCAACATCTACTGTTCCCGCTCAAAGGCTGACTACACCAGCCACCTGCGGAGCCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp AGGGGAGCACCAGCTTCACCCCGTGAGCACTCAAGTTaGTCATCACAGCCTTGGCACAGTCATCTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: RGAPASPREHSS*SSQPWHSHLQP
Trigger: AGGCTGCAGATGACTGTGCCAAGGCTGTGATGAGCAACTTGAGTGCTCACGGGGTGAAGCTGGTGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CCTTCTTTATGCCACTGCCTTGTTACTCCTGGGCAATaGCCATCACAGTGGCCGGCTGGAGTCTGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: PSLCHCLVTPGQ*PSQWPAGVCVC
Trigger: GCAGACGCAGACTCCAGCCGGCCACTGTGATGGGCATTGCCCAGGAGTAACAAGGCAGTGGCATAAAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS CCA 72 bp CAGTTGTTCAGTGTCGGTGACATCACCCTTGAGCCCTaGCACACCGGAGATGACACACAGAGCCTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: QLFSVGDITLEP*HTGDDTQSLLQ
Trigger: CTGCAGGAGGCTCTGTGTGTCATCTCCGGTGTGCCAGGGCTCAAGGGTGATGTCACCGACACTGAACAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp ATCACCGCCCTCTTCACAGCCACCGACAGCTCTTCCTaGCACCAGGACTTATCCAGGACACACTCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: ITALFTATDSSS*HQDLSRTHSGF
Trigger: GAAGCCAGAGTGTGTCCTGGATAAGTCCTGGTGCCAGGAAGAGCTGTCGGTGGCTGTGAAGAGGGCGGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS CCA 72 bp CACAGCCATCATCACCACTGCTGCTGGCACACAGGGTaGTCAGGGTGTCTGAAGCCAGAACCTGTAAGCGAG +
Preference number: 6 (lower is better)
Translates to: HSHHHHCCWHTG*SGCLKPEPVSE
Trigger: CTCGCTTACAGGTTCTGGCTTCAGACACCCTGACCACCCTGTGTGCCAGCAGCAGTGGTGATGATGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000551920.1
CDS CCA 72 bp ACAAACTTGGTGTCCAGCAGGGTCTGCAAGCACTTCTaGGTCTTCCTGGAGGGATCCGTCAGGGCATCCAGG +
Preference number: 6 (lower is better)
Translates to: TNLVSSRVCKHF*VFLEGSVRASR
Trigger: CCTGGATGCCCTGACGGATCCCTCCAGGAAGACCCAGAAGTGCTTGCAGACCCTGCTGGACACCAAGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp TGCCAGTCAGGACTCCTTCCCGCAACACTGGAAGGATaGAGGTCACTCCCTTCTTCGGGAGGCAGAATCCTG +
Preference number: 6 (lower is better)
Translates to: CQSGLLPATLEG*RSLPSSGGRIL
Trigger: CAGGATTCTGCCTCCCGAAGAAGGGAGTGACCTCCATCCTTCCAGTGTTGCGGGAAGGAGTCCTGACTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000549815.1
CDS CCA 72 bp CACTGCCTTGTTACTCCTGGGCAATGCCCATCACAGTaGCCGGCTGGAGTCTGCGTCTGCTTTCCTCACCAA +
Preference number: 6 (lower is better)
Translates to: HCLVTPGQCPSQ*PAGVCVCFPHQ
Trigger: TTGGTGAGGAAAGCAGACGCAGACTCCAGCCGGCCACTGTGATGGGCATTGCCCAGGAGTAACAAGGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS CCA 72 bp TGGCTCCCCTTCTTTATGCCACTGCCTTGTTACTCCTaGGCAATGCCCATCACAGTGGCCGGCTGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: WLPFFMPLPCYS*AMPITVAGWSL
Trigger: CAGACTCCAGCCGGCCACTGTGATGGGCATTGCCCAGGAGTAACAAGGCAGTGGCATAAAGAAGGGGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS CAA 72 bp GGCATGACACAGGCAGCCAAGGACAAGAAGGGGTTCTaGATCCTGGGAGCAGCCAGGGGAGACTTCAGCAAG +
Preference number: 6 (lower is better)
Translates to: GMTQAAKDKKGF*ILGAARGDFSK
Trigger: CTTGCTGAAGTCTCCCCTGGCTGCTCCCAGGATCAAGAACCCCTTCTTGTCCTTGGCTGCCTGTGTCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS CAA 72 bp TGCATAAGCCTCTGGATCATCCCTCCAGCATCCTCCTaGATGGCTGGCACAAGGGGTGGCAAGCAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: CISLWIIPPASS*MAGTRGGKQLA
Trigger: AGCCAGCTGCTTGCCACCCCTTGTGCCAGCCATCAAGGAGGATGCTGGAGGGATGATCCAGAGGCTTATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp TTGGATGGCATCAGTCAGTGCCGCCATCATCTCCTGTaGCTTCAGCGAGAGGATGCCCAGGCCCTTCACCAG +
Preference number: 6 (lower is better)
Translates to: LDGISQCRHHLL*LQREDAQALHQ
Trigger: CTGGTGAAGGGCCTGGGCATCCTCTCGCTGAAGCAACAGGAGATGATGGCGGCACTGACTGATGCCATCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp GAGGGCTCCCTCTCGCCGGCGGAAGTTCTTCTTATCTaGGATGGCATCAGTCAGTGCCGCCATCATCTCCTG +
Preference number: 6 (lower is better)
Translates to: EGSLSPAEVLLI*DGISQCRHHLL
Trigger: CAGGAGATGATGGCGGCACTGACTGATGCCATCCAAGATAAGAAGAACTTCCGCCGGCGAGAGGGAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp GGGTTCTGCAGACACTTAACGAACAGGCTGGAAAGTTaGGCCGGCAACTGCCCTCCGCCTGTCTCGATGTGG +
Preference number: 6 (lower is better)
Translates to: GFCRHLTNRLES*AGNCPPPVSMW
Trigger: CCACATCGAGACAGGCGGAGGGCAGTTGCCGGCCAAACTTTCCAGCCTGTTCGTTAAGTGTCTGCAGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp AGCCTAGAGGGCATGACACAGGCAGCCAAGGACAAGAAGGGGTTCTaGATCCTGGGAGCAGCCAGGGGAGACTTCAGCAAGGGCAGAAAA +
Preference number: 6 (lower is better)
Translates to: SLEGMTQAAKDKKGF*ILGAARGDFSKGRK
Trigger: TTTTCTGCCCTTGCTGAAGTCTCCCCTGGCTGCTCCCAGGATCAAGAACCCCTTCTTGTCCTTGGCTGCCTGTGTCATGCCCTCTAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS CAA 90 bp GGCATGATGAGGGCCAGGGATGGGGCATCAATGAAGTGGACAAACTaGGTGTCCAGCAGGGTCTGCAAGCACTTCTGGGTCTTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: GMMRARDGASMKWTN*VSSRVCKHFWVFLE
Trigger: CTCCAGGAAGACCCAGAAGTGCTTGCAGACCCTGCTGGACACCAAGTTTGTCCACTTCATTGATGCCCCATCCCTGGCCCTCATCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp CCAGCATGCCAGCATAGTTCTGGTTGGGCTCTAGGCTaGGAATGGCTGACAAGTACTGTTCCACCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: PACQHSSGWALG*EWLTSTVPPAR
Trigger: CCGGGCTGGTGGAACAGTACTTGTCAGCCATTCTCAGCCTAGAGCCCAACCAGAACTATGCTGGCATGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp CAGCCAGCTTCCGGATCTCCTCCTCCTTGTCAAACTTaGCCACCCAGAGTCTCCGCAGAAGGTTCAGGCCAT +
Preference number: 6 (lower is better)
Translates to: QPASGSPPPCQT*PPRVSAEGSGH
Trigger: ATGGCCTGAACCTTCTGCGGAGACTCTGGGTGGTCAAGTTTGACAAGGAGGAGGAGATCCGGAAGCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000548132.1
ENST00000551920.1
CDS TCA 72 bp TCACCTGAGAGCTGTCCAAATACTGGGAGAGCTTGTTaGGGGCCAACGCCAAGCCACACCTGGCTTCCCACT +
Preference number: 6 (lower is better)
Translates to: SPESCPNTGRAC*GPTPSHTWLPT
Trigger: AGTGGGAAGCCAGGTGTGGCTTGGCGTTGGCCCTCAACAAGCTCTCCCAGTATTTGGACAGCTCTCAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp AGGCCAATGCACACACCCTGCCTCTCATCGCTCTTCTaGGACCTCAGGCCTTCCTCAAGGATGGGGATGATC +
Preference number: 6 (lower is better)
Translates to: RPMHTPCLSSLF*DLRPSSRMGMI
Trigger: GATCATCCCCATCCTTGAGGAAGGCCTGAGGTCTCAGAAGAGCGATGAGAGGCAGGGTGTGTGCATTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp AATGCAGCTGCTCGAAAGTCTTGGCTGCCGCCTCTCTaGCCTCCTCCAGTGGGTCACACAAAGCCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: NAAARKSWLPPL*PPPVGHTKPSL
Trigger: CAAGGAAGGCTTTGTGTGACCCACTGGAGGAGGTCAGAGAGGCGGCAGCCAAGACTTTCGAGCAGCTGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS GCA 72 bp ATGATGGATTTGTCATACAGCTCCCCAGCAGGGGTCTaGATAATGGCAAACTCCTCCCGCGTCACCAGGCGC +
Preference number: 6 (lower is better)
Translates to: MMDLSYSSPAGV*IMANSSRVTRR
Trigger: GCGCCTGGTGACGCGGGAGGAGTTTGCCATTATGCAGACCCCTGCTGGGGAGCTGTATGACAAATCCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000550471.1
CDS GCA 72 bp GTTCTCCTTCCCATGAGTGTTGAGCGTTGCGAGGGCTaGATCCAACATGCACTTCCGGACATCTGGGTGTCG +
Preference number: 6 (lower is better)
Translates to: VLLPMSVERCEG*IQHALPDIWVS
Trigger: CGACACCCAGATGTCCGGAAGTGCATGTTGGATGCAGCCCTCGCAACGCTCAACACTCATGGGAAGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp TTGCGCTCTGCGTACTTGTCTGACTCCAGCAGCTGCTaGATAAGCCTCTGGATCATCCCTCCAGCATCCTCC +
Preference number: 6 (lower is better)
Translates to: LRSAYLSDSSSC*ISLWIIPPASS
Trigger: GGAGGATGCTGGAGGGATGATCCAGAGGCTTATGCAGCAGCTGCTGGAGTCAGACAAGTACGCAGAGCGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CCTTTGCGCTCTGCGTACTTGTCTGACTCCAGCAGCTaGTGCATAAGCCTCTGGATCATCCCTCCAGCATCC +
Preference number: 6 (lower is better)
Translates to: PLRSAYLSDSSS*CISLWIIPPAS
Trigger: GGATGCTGGAGGGATGATCCAGAGGCTTATGCAGCAGCTGCTGGAGTCAGACAAGTACGCAGAGCGCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CTGAACCTGATTCTCCAAAGGTCATCAAAGAGGCCTTaGTCTAGCTGGGGCAGCAGCAGGGCGATGGCTGTC +
Preference number: 6 (lower is better)
Translates to: LNLILQRSSKRP*SSWGSSRAMAV
Trigger: GACAGCCATCGCCCTGCTGCTGCCCCAGCTAGAGCAAGGCCTCTTTGATGACCTTTGGAGAATCAGGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GTCACTCCCTTCTTCGGGAGGCAGAATCCTGGCACATaGTCGCCTTTGCTCTCGTTCCCTATGAGCCGGATT +
Preference number: 6 (lower is better)
Translates to: VTPFFGRQNPGT*SPLLSFPMSRI
Trigger: AATCCGGCTCATAGGGAACGAGAGCAAAGGCGAGCATGTGCCAGGATTCTGCCTCCCGAAGAAGGGAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000549815.1
CDS GCA 72 bp CTCTTCACCCTGCCGCATCTTGAGGAGGTTGACAATTaGCTGGTCGCTGTAGGCCCTGACCACGGTGTTCTT +
Preference number: 6 (lower is better)
Translates to: LFTLPHLEEVDN*LVAVGPDHGVL
Trigger: AAGAACACCGTGGTCAGGGCCTACAGCGACCAGGCAATTGTCAACCTCCTCAAGATGCGGCAGGGTGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CCCACCCAACCGCACACACCCAGACTGCATCAGGGCTaGACAGGTCACTCACGTAGAGCTTTTCCTGGTAAA +
Preference number: 6 (lower is better)
Translates to: PTQPHTPRLHQG*TGHSRRAFPGK
Trigger: TTTACCAGGAAAAGCTCTACGTGAGTGACCTGTGCAGCCCTGATGCAGTCTGGGTGTGTGCGGTTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548132.1
CDS CCA 72 bp AGGGCTCCCTCTCGCCGGCGGAAGTTCTTCTTATCTTaGATGGCATCAGTCAGTGCCGCCATCATCTCCTGT +
Preference number: 6 (lower is better)
Translates to: RAPSRRRKFFLS*MASVSAAIISC
Trigger: ACAGGAGATGATGGCGGCACTGACTGATGCCATCCAAGATAAGAAGAACTTCCGCCGGCGAGAGGGAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp ATTCTCCAAAGGTCATCAAAGAGGCCTTGCTCTAGCTaGGGCAGCAGCAGGGCGATGGCTGTCTCAGCGTAC +
Preference number: 6 (lower is better)
Translates to: ILQRSSKRPCSS*GSSRAMAVSAY
Trigger: GTACGCTGAGACAGCCATCGCCCTGCTGCTGCCCCAGCTAGAGCAAGGCCTCTTTGATGACCTTTGGAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp CCTCCTCCAGTGGGTCACACAAAGCCTTCCTTGCCGTaGGCACGAGGGATTCAGAGAAATACAGCACGGCAT +
Preference number: 6 (lower is better)
Translates to: PPPVGHTKPSLP*ARGIQRNTARH
Trigger: ATGCCGTGCTGTATTTCTCTGAATCCCTCGTGCCCACGGCAAGGAAGGCTTTGTGTGACCCACTGGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp AAAATGGGAGAATGTCCTCCAGAGCCTGGTGGCCGATaGTGGAATGCAGCTGCTCGAAAGTCTTGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: KMGECPPEPGGR*WNAAARKSWLP
Trigger: CGGCAGCCAAGACTTTCGAGCAGCTGCATTCCACCATCGGCCACCAGGCTCTGGAGGACATTCTCCCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS CCA 72 bp GATGGAGGTCACTCCCTTCTTCGGGAGGCAGAATCCTaGCACATGCTCGCCTTTGCTCTCGTTCCCTATGAG +
Preference number: 6 (lower is better)
Translates to: DGGHSLLREAES*HMLAFALVPYE
Trigger: CTCATAGGGAACGAGAGCAAAGGCGAGCATGTGCCAGGATTCTGCCTCCCGAAGAAGGGAGTGACCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000549815.1
CDS CCA 72 bp ACATTGAGCAAAGATGTGGAGCGGCAATGCTGCTGCTaGCCCAGGCCTCTCATGTCAGGATGGTGTCGTCCA +
Preference number: 6 (lower is better)
Translates to: TLSKDVERQCCC*PRPLMSGWCRP
Trigger: TGGACGACACCATCCTGACATGAGAGGCCTGGGCCAGCAGCAGCATTGCCGCTCCACATCTTTGCTCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp CCTCCTCCAGTGGGTCACACAAAGCCTTCCTTGCCGTaGGCACGAGGGATTCAGAGAAATACAGCACCTGCA +
Preference number: 6 (lower is better)
Translates to: PPPVGHTKPSLP*ARGIQRNTAPA
Trigger: TGCAGGTGCTGTATTTCTCTGAATCCCTCGTGCCCACGGCAAGGAAGGCTTTGTGTGACCCACTGGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547263.1
CDS CCA 72 bp TGGCATTCATGGAGGACTGCCAGACAAACGCAGACATaGTCAGTGTGTGCCAAGGCTGGCACTGGCAAGAGG +
Preference number: 6 (lower is better)
Translates to: WHSWRTARQTQT*SVCAKAGTGKR
Trigger: CCTCTTGCCAGTGCCAGCCTTGGCACACACTGACCATGTCTGCGTTTGTCTGGCAGTCCTCCATGAATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550471.1
CDS CAA 72 bp AGCTTGGCAACAATGGGCTTCACTTTGGGGTCACTCTaGTCCAGGTGCTTGGCCAGAGAGCCCATCAGGACC +
Preference number: 6 (lower is better)
Translates to: SLATMGFTLGSL*SRCLAREPIRT
Trigger: GGTCCTGATGGGCTCTCTGGCCAAGCACCTGGACAAGAGTGACCCCAAAGTGAAGCCCATTGTTGCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp AGGGCAGCGATGAGCTTGGCAACAATGGGCTTCACTTaGGGGTCACTCTTGTCCAGGTGCTTGGCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: RAAMSLATMGFT*GSLLSRCLARE
Trigger: CTCTCTGGCCAAGCACCTGGACAAGAGTGACCCCAAAGTGAAGCCCATTGTTGCCAAGCTCATCGCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp AGGGCCAGGGATGGGGCATCAATGAAGTGGACAAACTaGGTGTCCAGCAGGGTCTGCAAGCACTTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: RARDGASMKWTN*VSSRVCKHFWV
Trigger: GACCCAGAAGTGCTTGCAGACCCTGCTGGACACCAAGTTTGTCCACTTCATTGATGCCCCATCCCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp AGGCACTGCACTTCCACCAGTTTGTTCCAGATGTCTCCTTGTCGCTaGGCTCTCGATGGAAAGACAATGCGCACCAGGAGGCAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: RHCTSTSLFQMSPCR*ALDGKTMRTRRQVQ
Trigger: CTGGACCTGCCTCCTGGTGCGCATTGTCTTTCCATCGAGAGCCAAGCGACAAGGAGACATCTGGAACAAACTGGTGGAAGTGCAGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp GAAGGCAAAGAGGGCTCCCTCTCGCCGGCGGAAGTTCTTCTTATCTaGGATGGCATCAGTCAGTGCCGCCATCATCTCCTGTTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: EGKEGSLSPAEVLLI*DGISQCRHHLLLLQ
Trigger: CTGAAGCAACAGGAGATGATGGCGGCACTGACTGATGCCATCCAAGATAAGAAGAACTTCCGCCGGCGAGAGGGAGCCCTCTTTGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp GGCACATGCTCGCCTTTGCTCTCGTTCCCTATGAGCCGGATTTCCTaGTGCAGCTCTTCAATGAGTGCCAACTGGTTGCCAGCATCCAGC +
Preference number: 6 (lower is better)
Translates to: GTCSPLLSFPMSRIS*CSSSMSANWLPASS
Trigger: GCTGGATGCTGGCAACCAGTTGGCACTCATTGAAGAGCTGCACAAGGAAATCCGGCTCATAGGGAACGAGAGCAAAGGCGAGCATGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000549815.1
CDS CAA 90 bp GTCACTCCCTTCTTCGGGAGGCAGAATCCTGGCACATGCTCGCCTTaGCTCTCGTTCCCTATGAGCCGGATTTCCTTGTGCAGCTCTTCA +
Preference number: 6 (lower is better)
Translates to: VTPFFGRQNPGTCSP*LSFPMSRISLCSSS
Trigger: TGAAGAGCTGCACAAGGAAATCCGGCTCATAGGGAACGAGAGCAAAGGCGAGCATGTGCCAGGATTCTGCCTCCCGAAGAAGGGAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000549815.1
CDS TCA 72 bp ACTTTAAGAGCAACAAGGCTGCGGCAACCCCTTCAGTaGTGGTGGGAACCTGAGTGCTTTGGGAGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: TLRATRLRQPLQ*WWEPECFGRLP
Trigger: AGGCAGCCTCCCAAAGCACTCAGGTTCCCACCATCACTGAAGGGGTTGCCGCAGCCTTGTTGCTCTTAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp GCCACACCTGGCTTCCCACTGATCTGGAGGAGATTCTaGAATAACTCGTCCCAAAGCATCCAGCACTGGGGG +
Preference number: 6 (lower is better)
Translates to: ATPGFPLIWRRF*NNSSQSIQHWG
Trigger: CCCCCAGTGCTGGATGCTTTGGGACGAGTTATTTCAGAATCTCCTCCAGATCAGTGGGAAGCCAGGTGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp GCATGCTCAGCAGGAGTGAGACGATGTTTTTCCGGATaGCGGCATCCACTTTGGCCCCTGCTCCCTGAATCA +
Preference number: 6 (lower is better)
Translates to: ACSAGVRRCFSG*RHPLWPLLPES
Trigger: TGATTCAGGGAGCAGGGGCCAAAGTGGATGCCGTCATCCGGAAAAACATCGTCTCACTCCTGCTGAGCATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GTCTGTCAGGGAGTACATGTTGCCAATAATCTGGGCTaGCATCTTCCGCGTGTCCGTGGAACGGTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: VCQGVHVANNLG*HLPRVRGTVLE
Trigger: TTCCAGGACCGTTCCACGGACACGCGGAAGATGGCAGCCCAGATTATTGGCAACATGTACTCCCTGACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp TCTGACCTCCTCCAGTGGGTCACACAAAGCCTTCCTTaGCGTGGGCACGAGGGATTCAGAGAAATACAGCAC +
Preference number: 6 (lower is better)
Translates to: SDLLQWVTQSLP*RGHEGFREIQH
Trigger: GTGCTGTATTTCTCTGAATCCCTCGTGCCCACGGCAAGGAAGGCTTTGTGTGACCCACTGGAGGAGGTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS CCA 72 bp GTGCCAGCACAGCTTCATCCATCAGGCGGGGACTGTTaGATTTCAGGTGACCAGCCAGTCCTTTCACGATGT +
Preference number: 6 (lower is better)
Translates to: VPAQLHPSGGDC*ISGDQPVLSRC
Trigger: ACATCGTGAAAGGACTGGCTGGTCACCTGAAATCCAACAGTCCCCGCCTGATGGATGAAGCTGTGCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548821.1
CDS CCA 72 bp CTGACGCTCCCAATCCCTGAGAGGACGCTCATCTTCTaGGCTACAACAGTTAGTTTTCCTTCCGAGCCTCCG +
Preference number: 6 (lower is better)
Translates to: LTLPIPERTLIF*ATTVSFPSEPP
Trigger: CGGAGGCTCGGAAGGAAAACTAACTGTTGTAGCCCAGAAGATGAGCGTCCTCTCAGGGATTGGGAGCGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp AAGGGCAGAAAAGAGTCGACCAAAACAGGGATGTACTaGGTCAGGCCGGACGGGTTCTTGGCCAGGATGATG +
Preference number: 6 (lower is better)
Translates to: KGRKESTKTGMY*VRPDGFLARMM
Trigger: CATCATCCTGGCCAAGAACCCGTCCGGCCTGACCCAGTACATCCCTGTTTTGGTCGACTCTTTTCTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300648.7
ENST00000547369.5
ENST00000550471.1
CDS CCA 72 bp TTCTTCTCATCAGTATCAGGTGCTGGCAATACCATGTaGAGTTCCATCAGCCCCCGGAGCACGGTTTCCCGC +
Preference number: 6 (lower is better)
Translates to: FFSSVSGAGNTM*SSISPRSTVSR
Trigger: GCGGGAAACCGTGCTCCGGGGGCTGATGGAACTCCACATGGTATTGCCAGCACCTGATACTGATGAGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000551920.1
CDS CCA 72 bp TCAGGACCACCACACTCTGTCGCACAGCATCATAGCTaGCATCATTGGGCGCGTTCTTCAGGAACTCCTCGA +
Preference number: 6 (lower is better)
Translates to: SGPPHSVAQHHS*HHWARSSGTPR
Trigger: TCGAGGAGTTCCTGAAGAACGCGCCCAATGATGCCAGCTATGATGCTGTGCGACAGAGTGTGGTGGTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp CTCCCTCTCGCCGGCGGAAGTTCTTCTTATCTTGGATaGCATCAGTCAGTGCCGCCATCATCTCCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: LPLAGGSSSYLG*HQSVPPSSPVA
Trigger: AGCAACAGGAGATGATGGCGGCACTGACTGATGCCATCCAAGATAAGAAGAACTTCCGCCGGCGAGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp TCACCCCGTGAGCACTCAAGTTGCTCATCACAGCCTTaGCACAGTCATCTGCAGCCTCACGCACATACTGGT +
Preference number: 6 (lower is better)
Translates to: SPREHSSCSSQP*HSHLQPHAHTG
Trigger: ACCAGTATGTGCGTGAGGCTGCAGATGACTGTGCCAAGGCTGTGATGAGCAACTTGAGTGCTCACGGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp GGCTCTCTGGACAATGGGCATGATGAGGGCCAGGGATaGGGCATCAATGAAGTGGACAAACTTGGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: GSLDNGHDEGQG*GINEVDKLGVQ
Trigger: CTGGACACCAAGTTTGTCCACTTCATTGATGCCCCATCCCTGGCCCTCATCATGCCCATTGTCCAGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp TTCTGGTCTGTCAGGGAGTACATGTTGCCAATAATCTaGGCTGCCATCTTCCGCGTGTCCGTGGAACGGTCC +
Preference number: 6 (lower is better)
Translates to: FWSVREYMLPII*AAIFRVSVERS
Trigger: GGACCGTTCCACGGACACGCGGAAGATGGCAGCCCAGATTATTGGCAACATGTACTCCCTGACAGACCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp GAGTCGGTCAGCACCTCCGTAAGCTTGGGCACAATGTaGGGTAGACAGGATGACAGCTGCTTAGGAGCACAG +
Preference number: 6 (lower is better)
Translates to: ESVSTSVSLGTM*GRQDDSCLGAQ
Trigger: CTGTGCTCCTAAGCAGCTGTCATCCTGTCTACCCAACATTGTGCCCAAGCTTACGGAGGTGCTGACCGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp TTCTTCGGGAGGCAGAATCCTGGCACATGCTCGCCTTaGCTCTCGTTCCCTATGAGCCGGATTTCCTTGTGC +
Preference number: 6 (lower is better)
Translates to: FFGRQNPGTCSP*LSFPMSRISLC
Trigger: GCACAAGGAAATCCGGCTCATAGGGAACGAGAGCAAAGGCGAGCATGTGCCAGGATTCTGCCTCCCGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000549815.1
CDS CAA 90 bp ACAGTTAGTTTTCCTTCCGAGCCTCCGAGGATAGCAAATAGGTGCTaGGTCAGGGATTCCATGGCCGAAGAGTCACTGCACTGGCGTGCC +
Preference number: 6 (lower is better)
Translates to: TVSFPSEPPRIANRC*VRDSMAEESLHWRA
Trigger: GGCACGCCAGTGCAGTGACTCTTCGGCCATGGAATCCCTGACCAAGCACCTATTTGCTATCCTCGGAGGCTCGGAAGGAAAACTAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp GCCTTCTGGACTTTGACATGGGAGTCGGTCAGCACCTCCGTAAGCTaGGGCACAATGTTGGGTAGACAGGATGACAGCTGCTTAGGAGCA +
Preference number: 6 (lower is better)
Translates to: AFWTLTWESVSTSVS*GTMLGRQDDSCLGA
Trigger: TGCTCCTAAGCAGCTGTCATCCTGTCTACCCAACATTGTGCCCAAGCTTACGGAGGTGCTGACCGACTCCCATGTCAAAGTCCAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp AGGTCCCTTCATGAACTTCCTGCTGAAGGAACGGGATaGACAGCTCAGCCACGATCCCATTCAGGACCTGAC +
Preference number: 6 (lower is better)
Translates to: RSLHELPAEGTG*TAQPRSHSGPD
Trigger: GTCAGGTCCTGAATGGGATCGTGGCTGAGCTGTTCATCCCGTTCCTTCAGCAGGAAGTTCATGAAGGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp CCAGAGCCCGGTGGTACTGCTGAACTTTGTTGCCAGTaGGTCTATGCGGGTGGTCAAGGAAAAGTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: PEPGGTAELCCQ*VYAGGQGKVSL
Trigger: CAGAGAGACTTTTCCTTGACCACCCGCATAGACTCACTGGCAACAAAGTTCAGCAGTACCACCGGGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp AGAAATACAGCACGGCATCCCGGCTGGTGGACTTCATaGTCTCACTTAGGCCAATGCACACACCCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: RNTARHPGWWTS*SHLGQCTHPAS
Trigger: AGAGGCAGGGTGTGTGCATTGGCCTAAGTGAGATCATGAAGTCCACCAGCCGGGATGCCGTGCTGTATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp AGCTTGGGCACAATGTTGGGTAGACAGGATGACAGCTaGTTAGGAGCACAGTACGCCATTGCCCCAAGAAGC +
Preference number: 6 (lower is better)
Translates to: SLGTMLGRQDDS*LGAQYAIAPRS
Trigger: GCTTCTTGGGGCAATGGCGTACTGTGCTCCTAAGCAGCTGTCATCCTGTCTACCCAACATTGTGCCCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CCGTGGCACTGCTCAGGATCATTTCCTGAACATCACTaGTATATCTGCCGGCACAAAGTCTGCCAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: PWHCSGSFPEHH*YICRHKVCQEP
Trigger: TGGCTCCTGGCAGACTTTGTGCCGGCAGATATAGCAGTGATGTTCAGGAAATGATCCTGAGCAGTGCCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp AAAACATTGAGCAAAGATGTGGAGCGGCAATGCTGCTaGTGGCCCAGGCCTCTCATGTCAGGATGGTGTCGT +
Preference number: 6 (lower is better)
Translates to: KTLSKDVERQCC*WPRPLMSGWCR
Trigger: ACGACACCATCCTGACATGAGAGGCCTGGGCCAGCAGCAGCATTGCCGCTCCACATCTTTGCTCAATGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp TTTGTTCCAGATGTCTCCTTGTCGCTTGGCTCTCGATaGAAAGACAATGCGCACCAGGAGGCAGGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: FVPDVSLSLGSR*KDNAHQEAGPG
Trigger: ACCTGGACCTGCCTCCTGGTGCGCATTGTCTTTCCATCGAGAGCCAAGCGACAAGGAGACATCTGGAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp CCACACTCTGTCGCACAGCATCATAGCTGGCATCATTaGGCGCGTTCTTCAGGAACTCCTCGAATACTGGCA +
Preference number: 6 (lower is better)
Translates to: PHSVAQHHSWHH*ARSSGTPRILA
Trigger: TGCCAGTATTCGAGGAGTTCCTGAAGAACGCGCCCAATGATGCCAGCTATGATGCTGTGCGACAGAGTGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp CGTGAACCACATACGGCTCAAAAAGTTTCCCCAGCATaGTGCAGAGCATCTCGAAGGCAAAGAGGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: REPHTAQKVSPA*CRASRRQRGLP
Trigger: AGGGAGCCCTCTTTGCCTTCGAGATGCTCTGCACCATGCTGGGGAAACTTTTTGAGCCGTATGTGGTTCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp TTTCCTTCCGAGCCTCCGAGGATAGCAAATAGGTGCTaGGTCAGGGATTCCATGGCCGAAGAGTCACTGCAC +
Preference number: 6 (lower is better)
Translates to: FPSEPPRIANRC*VRDSMAEESLH
Trigger: GTGCAGTGACTCTTCGGCCATGGAATCCCTGACCAAGCACCTATTTGCTATCCTCGGAGGCTCGGAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 72 bp ACTTTGACATGGGAGTCGGTCAGCACCTCCGTAAGCTaGGGCACAATGTTGGGTAGACAGGATGACAGCTGC +
Preference number: 6 (lower is better)
Translates to: TLTWESVSTSVS*GTMLGRQDDSC
Trigger: GCAGCTGTCATCCTGTCTACCCAACATTGTGCCCAAGCTTACGGAGGTGCTGACCGACTCCCATGTCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp TTGACATGGGAGTCGGTCAGCACCTCCGTAAGCTTGGGCACAATGTaGGGTAGACAGGATGACAGCTGCTTAGGAGCACAGTACGCCATT +
Preference number: 6 (lower is better)
Translates to: LTWESVSTSVSLGTM*GRQDDSCLGAQYAI
Trigger: AATGGCGTACTGTGCTCCTAAGCAGCTGTCATCCTGTCTACCCAACATTGTGCCCAAGCTTACGGAGGTGCTGACCGACTCCCATGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp AGTTTTCCTTCCGAGCCTCCGAGGATAGCAAATAGGTaGTTGGTCAGGGATTCCATGGCCGAAGAGTCACTG +
Preference number: 6 (lower is better)
Translates to: SFPSEPPRIANR*LVRDSMAEESL
Trigger: CAGTGACTCTTCGGCCATGGAATCCCTGACCAAGCACCTATTTGCTATCCTCGGAGGCTCGGAAGGAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CAGAAGGTTCAGGCCATTCTTCTCATCAGTATCAGGTaGTGGCAATACCATGTGGAGTTCCATCAGCCCCCG +
Preference number: 6 (lower is better)
Translates to: QKVQAILLISIR*WQYHVEFHQPP
Trigger: CGGGGGCTGATGGAACTCCACATGGTATTGCCAGCACCTGATACTGATGAGAAGAATGGCCTGAACCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000551920.1
CDS GCA 72 bp CCTTTGCTCTCGTTCCCTATGAGCCGGATTTCCTTGTaGAGCTCTTCAATGAGTGCCAACTGGTTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: PLLSFPMSRISL*SSSMSANWLPA
Trigger: TGCTGGCAACCAGTTGGCACTCATTGAAGAGCTGCACAAGGAAATCCGGCTCATAGGGAACGAGAGCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000549815.1
CDS GCA 72 bp ATGAAAACATTGAGCAAAGATGTGGAGCGGCAATGCTaGTGCTGGCCCAGGCCTCTCATGTCAGGATGGTGT +
Preference number: 6 (lower is better)
Translates to: MKTLSKDVERQC*CWPRPLMSGWC
Trigger: ACACCATCCTGACATGAGAGGCCTGGGCCAGCAGCAGCATTGCCGCTCCACATCTTTGCTCAATGTTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GCCGTGGGCACGAGGGATTCAGAGAAATACAGCACCTaGAATGGCAAGCTACAACTGTACCAGATGCAGGAA +
Preference number: 6 (lower is better)
Translates to: AVGTRDSEKYST*NGKLQLYQMQE
Trigger: TTCCTGCATCTGGTACAGTTGTAGCTTGCCATTGCAGGTGCTGTATTTCTCTGAATCCCTCGTGCCCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547263.1
CDS CCA 72 bp AAGGTTCAGGCCATTCTTCTCATCAGTATCAGGTGCTaGCAATACCATGTGGAGTTCCATCAGCCCCCGGAG +
Preference number: 6 (lower is better)
Translates to: KVQAILLISIRC*QYHVEFHQPPE
Trigger: CTCCGGGGGCTGATGGAACTCCACATGGTATTGCCAGCACCTGATACTGATGAGAAGAATGGCCTGAACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000551920.1
CDS CCA 72 bp CGGATTTCCTTGTGCAGCTCTTCAATGAGTGCCAACTaGTTGCCAGCATCCAGCTTCTGCAGGAATCCAGGA +
Preference number: 6 (lower is better)
Translates to: RISLCSSSMSAN*LPASSFCRNPG
Trigger: TCCTGGATTCCTGCAGAAGCTGGATGCTGGCAACCAGTTGGCACTCATTGAAGAGCTGCACAAGGAAATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549815.1
CDS CAA 72 bp TCGCCTTTGCTCTCGTTCCCTATGAGCCGGATTTCCTaGTGCAGCTCTTCAATGAGTGCCAACTGGTTGCCA +
Preference number: 6 (lower is better)
Translates to: SPLLSFPMSRIS*CSSSMSANWLP
Trigger: TGGCAACCAGTTGGCACTCATTGAAGAGCTGCACAAGGAAATCCGGCTCATAGGGAACGAGAGCAAAGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000549815.1
CDS CAA 90 bp CGGGAGGCTGCATCTCTATATCGATGCAGAGTCAAGCAGAACAATTaGCAGAGCCCCTTCACTGCTCCCTCTGGAAGATCTTTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: REAASLYRCRVKQNN*QSPFTAPSGRSFPA
Trigger: TGCTGGAAAAGATCTTCCAGAGGGAGCAGTGAAGGGGCTCTGCAAATTGTTCTGCTTGACTCTGCATCGATATAGAGATGCAGCCTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp CTTCTGTATGGTGGGCAGTATCAGATCCTTAAATTCTaGGTGGGACAGGTATCGGAGCAGAGGGGCACAGCT +
Preference number: 6 (lower is better)
Translates to: LLYGGQYQILKF*VGQVSEQRGTA
Trigger: AGCTGTGCCCCTCTGCTCCGATACCTGTCCCACTCAGAATTTAAGGATCTGATACTGCCCACCATACAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548821.1
CDS TCA 72 bp AGAGGCAGTTTCTGTGGTCATCTTCCCAGTGACTCCTaGGATGTGAAACAGGAGATCCCCAAGGAGCTGAAC +
Preference number: 6 (lower is better)
Translates to: RGSFCGHLPSDS*DVKQEIPKELN
Trigger: GTTCAGCTCCTTGGGGATCTCCTGTTTCACATCTCAGGAGTCACTGGGAAGATGACCACAGAAACTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CCTGCTTTTTCTCATCCACAATCAACTGCCAGAAACTaGTCAGTTTGGCCTCAGCCTGTGAGTCAGCCACTG +
Preference number: 6 (lower is better)
Translates to: PAFSHPQSTARN*SVWPQPVSQPL
Trigger: CAGTGGCTGACTCACAGGCTGAGGCCAAACTGAGCAGTTTCTGGCAGTTGATTGTGGATGAGAAAAAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp CTATGCGGGTGGTCAAGGAAAAGTCTCTCTGTCAGATaGAACACAGTACACAGGGCATCCTCTGAAGCCATG +
Preference number: 6 (lower is better)
Translates to: LCGWSRKSLSVR*NTVHRASSEAM
Trigger: CATGGCTTCAGAGGATGCCCTGTGTACTGTGTTGCATCTGACAGAGAGACTTTTCCTTGACCACCCGCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GCGGAAGTTCTTCTTATCTTGGATGGCATCAGTCAGTaGCGCCATCATCTCCTGTTGCTTCAGCGAGAGGAT +
Preference number: 6 (lower is better)
Translates to: AEVLLILDGISQ*RHHLLLLQRED
Trigger: ATCCTCTCGCTGAAGCAACAGGAGATGATGGCGGCACTGACTGATGCCATCCAAGATAAGAAGAACTTCCGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp TCAATGAGTGCCAACTGGTTGCCAGCATCCAGCTTCTaGAGGAATCCAGGAAAAAGCGAGAGGATGTACAGC +
Preference number: 6 (lower is better)
Translates to: SMSANWLPASSF*RNPGKSERMYS
Trigger: GCTGTACATCCTCTCGCTTTTTCCTGGATTCCTGCAGAAGCTGGATGCTGGCAACCAGTTGGCACTCATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549815.1
CDS GCA 72 bp TATGAGCCGGATTTCCTTGTGCAGCTCTTCAATGAGTaGCAACTGGTTGCCAGCATCCAGCTTCTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: YEPDFLVQLFNE*QLVASIQLLQE
Trigger: TTCCTGCAGAAGCTGGATGCTGGCAACCAGTTGGCACTCATTGAAGAGCTGCACAAGGAAATCCGGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549815.1
CDS CCA 72 bp TGTATGGTGGGCAGTATCAGATCCTTAAATTCTGAGTaGGACAGGTATCGGAGCAGAGGGGCACAGCTATCC +
Preference number: 6 (lower is better)
Translates to: CMVGSIRSLNSE*DRYRSRGAQLS
Trigger: GGATAGCTGTGCCCCTCTGCTCCGATACCTGTCCCACTCAGAATTTAAGGATCTGATACTGCCCACCATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548821.1
CDS CCA 72 bp ATCATTGGGCGCGTTCTTCAGGAACTCCTCGAATACTaGCAACAGCGAGTTGACGTTCTCCTTCCCATGAGT +
Preference number: 6 (lower is better)
Translates to: IIGRVLQELLEY*QQRVDVLLPMS
Trigger: ACTCATGGGAAGGAGAACGTCAACTCGCTGTTGCCAGTATTCGAGGAGTTCCTGAAGAACGCGCCCAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp TTCCATAGTGAATCGGTTACACCAGAGAGCCAGGACTaGGACAGCGTGTACCAAGGTCCCTTCATGAACTTC +
Preference number: 6 (lower is better)
Translates to: FHSESVTPESQD*DSVYQGPFMNF
Trigger: GAAGTTCATGAAGGGACCTTGGTACACGCTGTCTCAGTCCTGGCTCTCTGGTGTAACCGATTCACTATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp TTTAGTAAAAATGGGAGAATGTCCTCCAGAGCCTGGTaGCCGATGGTGGAATGCAGCTGCTCGAAAGTCTTG +
Preference number: 6 (lower is better)
Translates to: FSKNGRMSSRAW*PMVECSCSKVL
Trigger: CAAGACTTTCGAGCAGCTGCATTCCACCATCGGCCACCAGGCTCTGGAGGACATTCTCCCATTTTTACTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000547263.1
CDS GCA 72 bp CAGAGTCAAGCAGAACAATTTGCAGAGCCCCTTCACTaGTCCCTCTGGAAGATCTTTTCCAGCAACACACTT +
Preference number: 6 (lower is better)
Translates to: QSQAEQFAEPLH*SLWKIFSSNTL
Trigger: AAGTGTGTTGCTGGAAAAGATCTTCCAGAGGGAGCAGTGAAGGGGCTCTGCAAATTGTTCTGCTTGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp TATGAGCCGGATTTCCTTGTGCAGCTCTTCAATGAGTaGCAACTGGTTGCCAGCATCCAGCTTCTTAGTGAT +
Preference number: 6 (lower is better)
Translates to: YEPDFLVQLFNE*QLVASIQLLSD
Trigger: ATCACTAAGAAGCTGGATGCTGGCAACCAGTTGGCACTCATTGAAGAGCTGCACAAGGAAATCCGGCTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CCA 72 bp CGGATTTCCTTGTGCAGCTCTTCAATGAGTGCCAACTaGTTGCCAGCATCCAGCTTCTTAGTGATGGCATTT +
Preference number: 6 (lower is better)
Translates to: RISLCSSSMSAN*LPASSFLVMAF
Trigger: AAATGCCATCACTAAGAAGCTGGATGCTGGCAACCAGTTGGCACTCATTGAAGAGCTGCACAAGGAAATCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS CAA 90 bp GCATGCCTCACCGCAGATGTGGAGGTTTTAAGGCTGAAAGCTTTTTaGAACCATTCAGTGAGCTTCTTGGGCACTTCCATAGTGAATCGG +
Preference number: 6 (lower is better)
Translates to: ACLTADVEVLRLKAF*NHSVSFLGTSIVNR
Trigger: CCGATTCACTATGGAAGTGCCCAAGAAGCTCACTGAATGGTTCAAAAAAGCTTTCAGCCTTAAAACCTCCACATCTGCGGTGAGGCATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp GAGGGGCACAGCTATCCAACAGGTACTTCGGAGGCTTaGCTTTGCTCATCAGGATGTTCTTCATGTAAAAGT +
Preference number: 6 (lower is better)
Translates to: EGHSYPTGTSEA*LCSSGCSSCKS
Trigger: ACTTTTACATGAAGAACATCCTGATGAGCAAAGTCAAGCCTCCGAAGTACCTGTTGGATAGCTGTGCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp TCCACCTCTCGCTCACCAACAGGTACTTCGGAGGCTTaGCTTTGCTCATCAGGATGTTCTTCATGTAAAAGT +
Preference number: 6 (lower is better)
Translates to: STSRSPTGTSEA*LCSSGCSSCKS
Trigger: ACTTTTACATGAAGAACATCCTGATGAGCAAAGTCAAGCCTCCGAAGTACCTGTTGGTGAGCGAGAGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548821.1
CDS GCA 72 bp CATCTCTATATCGATGCAGAGTCAAGCAGAACAATTTaGAGAGCCCCTTCACTGCTCCCTCTGGAAGATCTT +
Preference number: 6 (lower is better)
Translates to: HLYIDAESSRTI*RAPSLLPLEDL
Trigger: AAGATCTTCCAGAGGGAGCAGTGAAGGGGCTCTGCAAATTGTTCTGCTTGACTCTGCATCGATATAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GAAGTGAAAACCTGCTTTTTCTCATCCACAATCAACTaGCAGAAACTGCTCAGTTTGGCCTCAGCCTGTGAG +
Preference number: 6 (lower is better)
Translates to: EVKTCFFSSTIN*QKLLSLASACE
Trigger: CTCACAGGCTGAGGCCAAACTGAGCAGTTTCTGGCAGTTGATTGTGGATGAGAAAAAGCAGGTTTTCACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS GCA 72 bp GTTAAACATCATAATGTAGCCATCTCGGACATGGGGTaGAATGTCCACTTTGCTGGCTGTAGCCACGATTTC +
Preference number: 6 (lower is better)
Translates to: VKHHNVAISDMG*NVHFAGCSHDF
Trigger: GAAATCGTGGCTACAGCCAGCAAAGTGGACATTGCACCCCATGTCCGAGATGGCTACATTATGATGTTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp GAAGATCTTTTCCAGCAACACACTTCCCAAGTTCACTaGGGATTTCTCTCCGTTCCTTTACACTGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: EDLFQQHTSQVH*GFLSVPLHWLL
Trigger: CAACAGCCAGTGTAAAGGAACGGAGAGAAATCCTCAGTGAACTTGGGAAGTGTGTTGCTGGAAAAGATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300648.7
CDS TCA 72 bp GATGTCCATGGCATACTGGCTGAGGTCAAGCGTCACTaGTGCCAGCAGACTAGAAATAGTTTCAATAACATT +
Preference number: 6 (lower is better)
Translates to: DVHGILAEVKRH*CQQTRNSFNNI
Trigger: AATGTTATTGAAACTATTTCTAGTCTGCTGGCATCAGTGACGCTTGACCTCAGCCAGTATGCCATGGACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300648.7
ENST00000548821.1
CDS GCA 72 bp CCTGCTTTTTCTCATCCACAATCAACTGCCAGAAACTaGTCAGTTTGGCCTCTGCAAGAAACAAAAGGTTAC +
Preference number: 6 (lower is better)
Translates to: PAFSHPQSTARN*SVWPLQETKGY
Trigger: GTAACCTTTTGTTTCTTGCAGAGGCCAAACTGAGCAGTTTCTGGCAGTTGATTGTGGATGAGAAAAAGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551549.1
CDS GCA 72 bp GAAGTGAAAACCTGCTTTTTCTCATCCACAATCAACTaGCAGAAACTGCTCAGTTTGGCCTCTGCAAGAAAC +
Preference number: 6 (lower is better)
Translates to: EVKTCFFSSTIN*QKLLSLASARN
Trigger: GTTTCTTGCAGAGGCCAAACTGAGCAGTTTCTGGCAGTTGATTGTGGATGAGAAAAAGCAGGTTTTCACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551549.1