RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GCLC (Homo sapiens)

Ensembl gene IDs: ENSG00000001084

Ensembl transcript IDs: ENST00000504353.1, ENST00000504525.1, ENST00000505197.1, ENST00000505294.5, ENST00000509541.5, ENST00000510837.5, ENST00000513939.6, ENST00000514004.5, ENST00000514373.3, ENST00000514933.2, ENST00000515580.1, ENST00000616923.5, ENST00000643939.1, ENST00000650454.1

Found 488 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTGCACTGAGAGCAGTCAGGCTGGCGGCTCAGAGGGGTCTTACATaGGTCCAGGCTCTGCACGGCCCTGTGCCTCTAAGGACGCTGTTT +
Preference number: 1 (lower is better)
Translates to: FALRAVRLAAQRGLT*VQALHGPVPLRTLF
Trigger: AAACAGCGTCCTTAGAGGCACAGGGCCGTGCAGAGCCTGGACCCATGTAAGACCCCTCTGAGCCGCCAGCCTGACTGCTCTCAGTGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR TCA 90 bp GCAGCTGTTTCAGGTGAAGGAAGGCTGGGTTCTGGGTCTTTGCACTaGGAGCAGTCAGGCTGGCGGCTCAGAGGGGTCTTACATGGGTCC +
Preference number: 1 (lower is better)
Translates to: AAVSGEGRLGSGSLH*EQSGWRLRGVLHGS
Trigger: GGACCCATGTAAGACCCCTCTGAGCCGCCAGCCTGACTGCTCTCAGTGCAAAGACCCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR GCA 90 bp ACGCTGCAGCTGTTTCAGGTGAAGGAAGGCTGGGTTCTGGGTCTTTaGACTGAGAGCAGTCAGGCTGGCGGCTCAGAGGGGTCTTACATG +
Preference number: 1 (lower is better)
Translates to: TLQLFQVKEGWVLGL*TESSQAGGSEGSYM
Trigger: CATGTAAGACCCCTCTGAGCCGCCAGCCTGACTGCTCTCAGTGCAAAGACCCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR TCA 90 bp TGTGGCCACCTGATGGGTTCCATGCTCTTCCACTCTGGTCCTAAGTaGGCTTGGACACACTCACTGCCAGGGGCACCATCATTTAAACAG +
Preference number: 1 (lower is better)
Translates to: CGHLMGSMLFHSGPK*AWTHSLPGAPSFKQ
Trigger: CTGTTTAAATGATGGTGCCCCTGGCAGTGAGTGTGTCCAAGCTCACTTAGGACCAGAGTGGAAGAGCATGGAACCCATCAGGTGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR TCA 90 bp GTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTaGGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTC +
Preference number: 1 (lower is better)
Translates to: VQFYHLVFILYTRAG*EAWYCSQFVNNAFF
Trigger: GAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
3UTR TCA 90 bp AAATCCCATGGCATCCATGTAAATATGATCCGGCTTAGAAGCCCTTaGAGCTTCATCATCCTCAGTAAATGTTTCTATAAATGGAGATGG +
Preference number: 1 (lower is better)
Translates to: KSHGIHVNMIRLRSP*SFIILSKCFYKWRW
Trigger: CCATCTCCATTTATAGAAACATTTACTGAGGATGATGAAGCTTCAAGGGCTTCTAAGCCGGATCATATTTACATGGATGCCATGGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
3UTR GCA 90 bp CACAAGCTGCTAAATATTTATTCTTTTTGTACCGCTAGACAGCTTTaGACAAATCCCTTGGATCACAAAATCATTGGAATACTTCCATCA +
Preference number: 1 (lower is better)
Translates to: HKLLNIYSFCTARQL*TNPLDHKIIGILPS
Trigger: TGATGGAAGTATTCCAATGATTTTGTGATCCAAGGGATTTGTGCAAAGCTGTCTAGCGGTACAAAAAGAATAAATATTTAGCAGCTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR CCA 90 bp CTAGATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTaGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTAT +
Preference number: 1 (lower is better)
Translates to: LDLPTKESLNQFLAH*PRKQYSSIIWSSYY
Trigger: ATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
3UTR-3UTR CCA 90 bp GTGTGTGTGCACGCTGCAGCTGTTTCAGGTGAAGGAAGGCTGGGTTCTGGGTCTCAGAGGGGTCTTACATaGGTCCAGGCTCTGCACGGC +
Preference number: 2 (lower is better)
Translates to: VCVHAAAVSGEGRLGSGSQRGLT*VQALHG
Trigger: GCCGTGCAGAGCCTGGACCCATGTAAGACCCCTCTG...AGACCCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGCAGCGTGCACACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR-3UTR TCA 90 bp ACTGAGAGCAGTCAGGCTGGCGGCTCAGAGGGGTCTTACATGGGTCCAGGCTCTTATATACCTTTGTGGTaGACAACAGAGTCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: TESSQAGGSEGSYMGPGSYIPLW*TTESVE
Trigger: TTCTACAGACTCTGTTGTTCACCACAAAGGTATATA...AGAGCCTGGACCCATGTAAGACCCCTCTGAGCCGCCAGCCTGACTGCTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR-3UTR GCA 90 bp AAAAGCCAACTGCAGGCTTTTGTGTGGCCACCTGATGGGTTCCATGCTCTTCCAACCGCTAGACAGCTTTaGACAAATCCCTTGGATCAC +
Preference number: 2 (lower is better)
Translates to: KSQLQAFVWPPDGFHALPTARQL*TNPLDH
Trigger: GTGATCCAAGGGATTTGTGCAAAGCTGTCTAGCGGT...TGGAAGAGCATGGAACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR-3UTR GCA 90 bp CTACAGATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCCCTGGAGACAGCAATTaGCCATTCCAAATCCCATGG +
Preference number: 2 (lower is better)
Translates to: LQMQKSLPSDNQCLTHSLPGDSN*PFQIPW
Trigger: CCATGGGATTTGGAATGGGCAATTGCTGTCTCCAGG...GAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCATCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
3UTR-3UTR TCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACTACACACGGGCTGGCTaGGAGGCATGGTACTGTAGC +
Preference number: 2 (lower is better)
Translates to: IYLPKKALINFWLTGPENYTRAG*EAWYCS
Trigger: GCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTA...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
3UTR-3UTR CCA 90 bp ATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCGGTAAAGATATACTGCAGGCTTaGAATGTCACCTGGAGACAG +
Preference number: 2 (lower is better)
Translates to: MQKSLPSDNQCLTHSLGKDILQA*NVTWRQ
Trigger: CTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATC...TTTACCGAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
3UTR-3UTR CCA 90 bp ACAGAGCCAAAAGCCAACTGCAGGCTTTTGTGTGGCCACCTGATGGGTTCCATGGGATCACAAAATCATTaGAATACTTCCATCAGAGCT +
Preference number: 2 (lower is better)
Translates to: TEPKANCRLLCGHLMGSMGSQNH*NTSIRA
Trigger: AGCTCTGATGGAAGTATTCCAATGATTTTGTGATCC...CATGGAACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGCTTTTGGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR-3UTR CCA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCGCCTTAATCAATTTCTaGCTCACTGGCCCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTALINF*LTGPEN
Trigger: GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGC...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
3UTR-3UTR TCA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTTACACACGGGCTGGCTaGGAGGCATGGTACTGTAGC +
Preference number: 2 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSYTRAG*EAWYCS
Trigger: GCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTA...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
3UTR-3UTR TCA 90 bp AGCCATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCCAAGATTACCCTTaGAGCACTTTCAATGGATTC +
Preference number: 2 (lower is better)
Translates to: SHQSSMGIYSEGKAWGKVTQDYP*STFNGF
Trigger: GAATCCATTGAAAGTGCTTCAAGGGTAATCTTGGGT...CACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
3UTR-3UTR CCA 90 bp AAAAGCCAACTGCAGGCTTTTGTGTGGCCACCTGATGGGTTCCATGCTCTTCCATTTGCACAAATCCCTTaGATCACAAAATCATTGGAA +
Preference number: 2 (lower is better)
Translates to: KSQLQAFVWPPDGFHALPFAQIP*ITKSLE
Trigger: TTCCAATGATTTTGTGATCCAAGGGATTTGTGCAAA...TGGAAGAGCATGGAACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR-3UTR CCA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAAATTATACACACGGGCTaGCTGAGAGGCATGGTACTG +
Preference number: 2 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKIIHTG*LRGMVL
Trigger: CAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAAT...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
3UTR-3UTR GCA 90 bp GCTAGACAGCTTTGCACAAATCCCTTGGATCACAAAATCATTGGAATACTTCCAATGGATGGAACACTTTaGCTCTCTGTATATTTGAAA +
Preference number: 2 (lower is better)
Translates to: ARQLCTNPLDHKIIGILPMDGTL*LSVYLK
Trigger: TTTCAAATATACAGAGAGGCAAAGTGTTCCATCCAT...TGGAAGTATTCCAATGATTTTGTGATCCAAGGGATTTGTGCAAAGCTGTCTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR-3UTR GCA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTATGCCTGTAAAGATCTaGATAATCTACAATACAGAG +
Preference number: 2 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSMPVKI*IIYNTE
Trigger: CTCTGTATTGTAGATTATGCAGATCTTTACAGGCAT...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
3UTR CCA 72 bp AGAGCAGTCAGGCTGGCGGCTCAGAGGGGTCTTACATaGGTCCAGGCTCTGCACGGCCCTGTGCCTCTAAGG +
Preference number: 3 (lower is better)
Translates to: RAVRLAAQRGLT*VQALHGPVPLR
Trigger: CCTTAGAGGCACAGGGCCGTGCAGAGCCTGGACCCATGTAAGACCCCTCTGAGCCGCCAGCCTGACTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR TCA 72 bp CTGATGGGTTCCATGCTCTTCCACTCTGGTCCTAAGTaGGCTTGGACACACTCACTGCCAGGGGCACCATCA +
Preference number: 3 (lower is better)
Translates to: LMGSMLFHSGPK*AWTHSLPGAPS
Trigger: TGATGGTGCCCCTGGCAGTGAGTGTGTCCAAGCTCACTTAGGACCAGAGTGGAAGAGCATGGAACCCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR CCA 72 bp AGTGACAGAGCCAAAAGCCAACTGCAGGCTTTTGTGTaGCCACCTGATGGGTTCCATGCTCTTCCACTCTGG +
Preference number: 3 (lower is better)
Translates to: SDRAKSQLQAFV*PPDGFHALPLW
Trigger: CCAGAGTGGAAGAGCATGGAACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGCTTTTGGCTCTGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR GCA 72 bp TCCACTCTGGTCCTAAGTGAGCTTGGACACACTCACTaGCAGGGGCACCATCATTTAAACAGATCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: STLVLSELGHTH*QGHHHLNRSRK
Trigger: TTTCCTGGATCTGTTTAAATGATGGTGCCCCTGGCAGTGAGTGTGTCCAAGCTCACTTAGGACCAGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR TCA 72 bp AGATGCAGAAATCACTCCCCAGCGACAATCAATGTCTaGCACATAGCCTCGGTAAAAGGGAGATGCAGCACT +
Preference number: 3 (lower is better)
Translates to: RCRNHSPATINV*HIASVKGRCST
Trigger: AGTGCTGCATCTCCCTTTTACCGAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504525.1
3UTR-3UTR CAA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTTTCAGAGGGGAAAGCTaGGGGCAAGGTGACCAAGTG +
Preference number: 3 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSFRGES*GQGDQV
Trigger: CACTTGGTCACCTTGCCCCAAGCTTTCCCCTCTGAA...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
3UTR-3UTR CAA 90 bp GGTAAACAGAGACAGGCTCCTGTATACTTTACTCAGGGGCAAGACAAACACAAGTGGATCACAAAATCATaGGAATACTTCCATCAGAGC +
Preference number: 3 (lower is better)
Translates to: GKQRQAPVYFTQGQDKHKWITKS*EYFHQS
Trigger: GCTCTGATGGAAGTATTCCAATGATTTTGTGATCCA...CTTGTGTTTGTCTTGCCCCTGAGTAAAGTATACAGGAGCCTGTCTCTGTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR TCA 72 bp TATCATTTGGTCTTCATATTATACACACGGGCTGGCTaGGAGGCATGGTACTGTAGCCAGTTCGTCAATAAT +
Preference number: 3 (lower is better)
Translates to: YHLVFILYTRAG*EAWYCSQFVNN
Trigger: ATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
3UTR CCA 72 bp CTTTTTGTACCGCTAGACAGCTTTGCACAAATCCCTTaGATCACAAAATCATTGGAATACTTCCATCAGAGC +
Preference number: 3 (lower is better)
Translates to: LFVPLDSFAQIP*ITKSLEYFHQS
Trigger: GCTCTGATGGAAGTATTCCAATGATTTTGTGATCCAAGGGATTTGTGCAAAGCTGTCTAGCGGTACAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514004.5
3UTR CCA 72 bp CCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTaGCCCAGAAAACAGTACAGTTCTATCATTTGGTCT +
Preference number: 3 (lower is better)
Translates to: PTKESLNQFLAH*PRKQYSSIIWS
Trigger: AGACCAAATGATAGAACTGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
3UTR-3UTR CAA 90 bp TGCAGCACTCAAAGCCATAACAATTGGACAGATAGTAGCCAACTGATCATAAAGGGAGATGGTGTATTCTaGTCCTTAAATATTGGTACA +
Preference number: 3 (lower is better)
Translates to: CSTQSHNNWTDSSQLIIKGDGVF*SLNIGT
Trigger: TGTACCAATATTTAAGGACAAGAATACACCATCTCC...CTTTATGATCAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTGAGTGCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR TCA 90 bp GCGGCTCAGAGGGGTCTTACATGGGTCCAGGCTCTGCACGGCCCTGTGCCTCTATTTTGTGTGGCCACCTaGTGGGTTCCATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: AAQRGLTWVQALHGPVPLFCVAT*WVPCSS
Trigger: GGAAGAGCATGGAACCCATCAGGTGGCCACACAAAA...TAGAGGCACAGGGCCGTGCAGAGCCTGGACCCATGTAAGACCCCTCTGAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp GTGTGTGTGCACGCTGCAGCTGTTTCAGGTGAAGGAAGGCTGGGTTCTGGGTCTGGTCGGCATGGCGCTTaGTTTCCTCCCAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: VCVHAAAVSGEGRLGSGSGRHGA*FPPSSA
Trigger: CGCTGAGCTGGGAGGAAACCAAGCGCCATGCCGACC...AGACCCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGCAGCGTGCACACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR GCA 90 bp GTGTGTGTGCACGCTGCAGCTGTTTCAGGTGAAGGAAGGCTGGGTTCTGGGTCTGCTCCCGCTTCTCTTTaGCGGTCTGGTGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: VCVHAAAVSGEGRLGSGSAPASL*RSGALA
Trigger: AGCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGC...AGACCCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGCAGCGTGCACACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR GCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTCGCCGCCGCGGAGCATaGCCAGTCTTTGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASRRRGA*PVFASA
Trigger: AGCGGACGCAAAGACTGGGCATGCTCCGCGGCGGCG...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR GCA 90 bp GGCTTGGAATGTCACCTGGAGACAGCAATTGCCCATTCCAAATCCCATGGCATCAACTGGAGGATCCCGTaGCGCCGCACGTGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: GLECHLETAIAHSKSHGINWRIP*RRTWSA
Trigger: TGCCGACCACGTGCGGCGGCACGGGATCCTCCAGTT...GATGCCATGGGATTTGGAATGGGCAATTGCTGTCTCCAGGTGACATTCCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CCA 90 bp CTACAGATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCGGGACAGCAGCCCCATaGCCGCCCCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LQMQKSLPSDNQCLTHSLGTAAP*PPPPPP
Trigger: AGGAGGAGGAGGGGGCGGCCATGGGGCTGCTGTCCC...GAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCATCTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR TCA 90 bp ACAGAGCCAAAAGCCAACTGCAGGCTTTTGTGTGGCCACCTGATGGGTTCCATGCCTCATCGCCCCACTTaGGAACGTCCTTGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: TEPKANCRLLCGHLMGSMPHRPT*ERPCAG
Trigger: ACCGGCACAAGGACGTTCTCAAGTGGGGCGATGAGG...CATGGAACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGCTTTTGGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR TCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTGCCGCGCAGTTGTTGTaGTACAGCCCCCGCCACGTG +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASAAQLL*YSPRHV
Trigger: CACGTGGCGGGGGCTGTATCACAACAACTGCGCGGC...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616923.5
CDS-3UTR CCA 90 bp ATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCGGTAAACCAGGTGACAGACCCTaGGTCCGACGCACCGCGCGG +
Preference number: 4 (lower is better)
Translates to: MQKSLPSDNQCLTHSLGKPGDRP*VRRTAR
Trigger: CCGCGCGGTGCGTCGGACCCAGGGTCTGTCACCTGG...TTTACCGAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CCA 90 bp ACAGAGCCAAAAGCCAACTGCAGGCTTTTGTGTGGCCACCTGATGGGTTCCATGCAGAGGGGTCTTACATaGGTCCAGGCTCTGCACGGC +
Preference number: 4 (lower is better)
Translates to: TEPKANCRLLCGHLMGSMQRGLT*VQALHG
Trigger: GCCGTGCAGAGCCTGGACCCATGTAAGACCCCTCTG...CATGGAACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGCTTTTGGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR TCA 90 bp GGCTTGGAATGTCACCTGGAGACAGCAATTGCCCATTCCAAATCCCATGGCATCCCTTGTGCCGGTCCTTaGCGGCGTGGTAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: GLECHLETAIAHSKSHGIPCAGP*RRGRCA
Trigger: TGCACATCTACCACGCCGTCAAGGACCGGCACAAGG...GATGCCATGGGATTTGGAATGGGCAATTGCTGTCTCCAGGTGACATTCCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR TCA 90 bp AAGTGTGTGTGCACGCTGCAGCTGTTTCAGGTGAAGGAAGGCTGGGTTCTGGGTTGCAGCTGTTTCAGGTaGAGGAAGGCTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KCVCTLQLFQVKEGWVLGCSCFR*RKAGFW
Trigger: CCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGCA...ACCCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGCAGCGTGCACACACACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR GCA 90 bp AACAGAGACAGGCTCCTGTATACTTTACTCAGGGGCAAGACAAACACAAGCTGCAACTGGAGGATCCCGTaGCGCCGCACGTGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: NRDRLLYTLLRGKTNTSCNWRIP*RRTWSA
Trigger: TGCCGACCACGTGCGGCGGCACGGGATCCTCCAGTT...GCAGCTTGTGTTTGTCTTGCCCCTGAGTAAAGTATACAGGAGCCTGTCTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR GCA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTAACTGGAGGATCCCGTaGCGCCGCACGTGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: GLAERHGTVASSSIMHFSNWRIP*RRTWSA
Trigger: TGCCGACCACGTGCGGCGGCACGGGATCCTCCAGTT...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AAGGTATCTGGCCTCAGATATACTGCAGGCTTGGAATGTCACCTGGAGACAGCAGGTCGGCATGGCGCTTaGTTTCCTCCCAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: KVSGLRYTAGLECHLETAGRHGA*FPPSSA
Trigger: CGCTGAGCTGGGAGGAAACCAAGCGCCATGCCGACC...TGCTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCTGAGGCCAGATACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR TCA 90 bp TGCAGCACTCAAAGCCATAACAATTGGACAGATAGTAGCCAACTGATCATAAAGCCCCTGGCGCCCAGGTaGCAGACCCTGGGTCCGACG +
Preference number: 4 (lower is better)
Translates to: CSTQSHNNWTDSSQLIIKPLAPR*QTLGPT
Trigger: CGTCGGACCCAGGGTCTGTCACCTGGGCGCCAGGGG...CTTTATGATCAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTGAGTGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR TCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGACCCCTGGCGCCCAGGTaGCAGACCCTGGGTCCGACG +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRPLAPR*QTLGPT
Trigger: CGTCGGACCCAGGGTCTGTCACCTGGGCGCCAGGGG...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR TCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTCCTTGTGCCGGTCCTTaGCGGCGTGGTAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASPCAGP*RRGRCA
Trigger: TGCACATCTACCACGCCGTCAAGGACCGGCACAAGG...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTCTGCAGCGAGCTCCGTaGTGTTCTGGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: GLAERHGTVASSSIMHFSLQRAP*CSGPCH
Trigger: GTGGCAAGGCCCAGAACAGCACGGAGCTCGCTGCAG...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp CTACAGATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCCTTGTGACCAAAACCTaGGCCGCCGCGGAGCATGCC +
Preference number: 4 (lower is better)
Translates to: LQMQKSLPSDNQCLTHSLLVTKT*AAAEHA
Trigger: GGCATGCTCCGCGGCGGCGCAGGTTTTGGTCACAAG...GAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCATCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR GCA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACACCTCGCCCTCCCCGCTaGTCCTCCTCCCGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: LPKKALINFWLTGPENSTPRPPR*SSSRSD
Trigger: ATCGGAGCGGGAGGAGGAGCAGCGGGGAGGGCGAGG...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR GCA 90 bp GTGTGTGTGCACGCTGCAGCTGTTTCAGGTGAAGGAAGGCTGGGTTCTGGGTCTCCTGGAGACAGCAATTaGCCATTCCAAATCCCATGG +
Preference number: 4 (lower is better)
Translates to: VCVHAAAVSGEGRLGSGSPGDSN*PFQIPW
Trigger: CCATGGGATTTGGAATGGGCAATTGCTGTCTCCAGG...AGACCCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGCAGCGTGCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR GCA 90 bp AAGTGTGTGTGCACGCTGCAGCTGTTTCAGGTGAAGGAAGGCTGGGTTCTGGGTTGGGTTCTGGGTCTTTaGACTGAGAGCAGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: KCVCTLQLFQVKEGWVLGWVLGL*TESSQA
Trigger: AGCCTGACTGCTCTCAGTGCAAAGACCCAGAACCCA...ACCCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGCAGCGTGCACACACACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR GCA 90 bp TACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTTCGCCCAGGCTGGGGTaGAGTGGCGCGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: YLPKKALINFWLTGPENSSPRLG*SGALSA
Trigger: AGCCGAGAGCGCGCCACTGCACCCCAGCCTGGGCGA...ACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CCA 90 bp ACCACCTCACTAGCCTGTCACGAGATGGCAGTAAAAACTAGGCATATAAAAAGACCAGGTGACAGACCCTaGGTCCGACGCACCGCGCGG +
Preference number: 4 (lower is better)
Translates to: TTSLACHEMAVKTRHIKRPGDRP*VRRTAR
Trigger: CCGCGCGGTGCGTCGGACCCAGGGTCTGTCACCTGG...TCTTTTTATATGCCTAGTTTTTACTGCCATCTCGTGACAGGCTAGTGAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp ACCACCTCACTAGCCTGTCACGAGATGGCAGTAAAAACTAGGCATATAAAAAGAGGGACAGCAGCCCCATaGCCGCCCCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TTSLACHEMAVKTRHIKRGTAAP*PPPPPP
Trigger: AGGAGGAGGAGGGGGCGGCCATGGGGCTGCTGTCCC...TCTTTTTATATGCCTAGTTTTTACTGCCATCTCGTGACAGGCTAGTGAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp AGCCATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGGGTCGGCATGGCGCTTaGTTTCCTCCCAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SHQSSMGIYSEGKAWGKVGRHGA*FPPSSA
Trigger: CGCTGAGCTGGGAGGAAACCAAGCGCCATGCCGACC...CACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR CCA 90 bp AGCGACAATCAATGTCTGACACATAGCCTCGGTAAAAGGGAGATGCAGCACTCACGCACGTGGTCGGCATaGCGCTTGGTTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SDNQCLTHSLGKREMQHSRTWSA*RLVSSQ
Trigger: CTGGGAGGAAACCAAGCGCCATGCCGACCACGTGCG...TGAGTGCTGCATCTCCCTTTTACCGAGGCTATGTGTCAGACATTGATTGTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CCA 90 bp GTGTGTGTGCACGCTGCAGCTGTTTCAGGTGAAGGAAGGCTGGGTTCTGGGTCTTCCGTAGGGCTGTCCTaGTGTCCCTTCAATCATGTA +
Preference number: 4 (lower is better)
Translates to: VCVHAAAVSGEGRLGSGSSVGLS*CPFNHV
Trigger: TACATGATTGAAGGGACACCAGGACAGCCCTACGGA...AGACCCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGCAGCGTGCACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCCGTGGAGATCCGCATaGGGGGACGCCGTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERPWRSA*GDAVQS
Trigger: CGACTGCACGGCGTCCCCCCATGCGGATCTCCACGG...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616923.5
CDS-3UTR TCA 90 bp AGCGACAATCAATGTCTGACACATAGCCTCGGTAAAAGGGAGATGCAGCACTCACCTCATCGCCCCACTTaGGAACGTCCTTGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: SDNQCLTHSLGKREMQHSPHRPT*ERPCAG
Trigger: ACCGGCACAAGGACGTTCTCAAGTGGGGCGATGAGG...TGAGTGCTGCATCTCCCTTTTACCGAGGCTATGTGTCAGACATTGATTGTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR TCA 90 bp GTGTGTGTGCACGCTGCAGCTGTTTCAGGTGAAGGAAGGCTGGGTTCTGGGTCTTGGCCTCAACTGTATTaGACTCGGACATTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VCVHAAAVSGEGRLGSGSWPQLY*TRTLFL
Trigger: GAGGAACAATGTCCGAGTTCAATACAGTTGAGGCCA...AGACCCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGCAGCGTGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR TCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGTCGTGAGGCCAAGCTaGGCATGCTCGGAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVVVRPS*ACSESR
Trigger: CCGGCTCTCCGAGCATGCTCAGCTTGGCCTCACGAC...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616923.5
CDS-3UTR GCA 90 bp CTACAGATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCGCTCCCGCTTCTCTTTaGCGGTCTGGTGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LQMQKSLPSDNQCLTHSLAPASL*RSGALA
Trigger: AGCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGC...GAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCATCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR GCA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCGCTCCCGCTTCTCTTTaGCGGTCTGGTGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTAPASL*RSGALA
Trigger: AGCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGC...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR GCA 90 bp CAAAGCCATAACAATTGGACAGATAGTAGCCAACTGATCATAAAGGTATCTGGCCCTCGCCCTCCCCGCTaGTCCTCCTCCCGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: QSHNNWTDSSQLIIKVSGPRPPR*SSSRSD
Trigger: ATCGGAGCGGGAGGAGGAGCAGCGGGGAGGGCGAGG...GCCAGATACCTTTATGATCAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR GCA 90 bp TTTTGTACCGCTAGACAGCTTTGCACAAATCCCTTGGATCACAAAATCATTGGACCTCGCCCTCCCCGCTaGTCCTCCTCCCGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: FCTARQLCTNPLDHKIIGPRPPR*SSSRSD
Trigger: ATCGGAGCGGGAGGAGGAGCAGCGGGGAGGGCGAGG...TCCAATGATTTTGTGATCCAAGGGATTTGTGCAAAGCTGTCTAGCGGTACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR GCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTAACTGGAGGATCCCGTaGCGCCGCACGTGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTNWRIP*RRTWSA
Trigger: TGCCGACCACGTGCGGCGGCACGGGATCCTCCAGTT...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp GTGTGTGTGCACGCTGCAGCTGTTTCAGGTGAAGGAAGGCTGGGTTCTGGGTCTACCGCTAGACAGCTTTaGACAAATCCCTTGGATCAC +
Preference number: 4 (lower is better)
Translates to: VCVHAAAVSGEGRLGSGSTARQL*TNPLDH
Trigger: GTGATCCAAGGGATTTGTGCAAAGCTGTCTAGCGGT...AGACCCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGCAGCGTGCACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGGGGACAGCAGCCCCATaGCCGCCCCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGGTAAP*PPPPPP
Trigger: AGGAGGAGGAGGGGGCGGCCATGGGGCTGCTGTCCC...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR CCA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACACAGGCTGGGGTGCAGTaGCGCGCTCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LPKKALINFWLTGPENSTQAGVQ*RALGSL
Trigger: CAGTGAGCCGAGAGCGCGCCACTGCACCCCAGCCTG...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR TCA 90 bp AGCCATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGTACACACGGGCTGGCTaGGAGGCATGGTACTGTAGC +
Preference number: 4 (lower is better)
Translates to: SHQSSMGIYSEGKAWGKVYTRAG*EAWYCS
Trigger: GCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTA...CACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR TCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGACGCCGTGCAGTCGTaGGGCCAAGCTGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVDAVQS*GQAEHA
Trigger: AGCATGCTCAGCTTGGCCTCACGACTGCACGGCGTC...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616923.5
CDS-3UTR GCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTACTGCAGCGAGCTCCGTaGTGTTCTGGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVLQRAP*CSGPCH
Trigger: GTGGCAAGGCCCAGAACAGCACGGAGCTCGCTGCAG...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp AGCCATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGGAGGGTGTACTCCTCTaGAGCGAGCTCCGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SHQSSMGIYSEGKAWGKVEGVLL*SELRAV
Trigger: AACAGCACGGAGCTCGCTGCAGAGGAGTACACCCTC...CACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCGAGGGTGTACTCCTCTaGAGCGAGCTCCGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTEGVLL*SELRAV
Trigger: AACAGCACGGAGCTCGCTGCAGAGGAGTACACCCTC...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp CAAAGCCATAACAATTGGACAGATAGTAGCCAACTGATCATAAAGGTATCTGGCCGCCGCCGCGGAGCATaGCCAGTCTTTGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: QSHNNWTDSSQLIIKVSGRRRGA*PVFASA
Trigger: AGCGGACGCAAAGACTGGGCATGCTCCGCGGCGGCG...GCCAGATACCTTTATGATCAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR GCA 90 bp CTACAGATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCTTGAGAACGTCCTTGTaGCGGTCCTTGACGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LQMQKSLPSDNQCLTHSLLRTSL*RSLTAW
Trigger: CCACGCCGTCAAGGACCGGCACAAGGACGTTCTCAA...GAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCATCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTGCCGGTCTGGTGCACTaGCTTCTTCCTACTTGTGAC +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASAGLVH*LLPTCD
Trigger: GTCACAAGTAGGAAGAAGCCAGTGCACCAGACCGGC...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR CCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTCCAGGTGACAGACCCTaGGTCCGACGCACCGCGCGG +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAPGDRP*VRRTAR
Trigger: CCGCGCGGTGCGTCGGACCCAGGGTCTGTCACCTGG...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCGCACGTGGTCGGCATaGCGCTTGGTTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERRTWSA*RLVSSQ
Trigger: CTGGGAGGAAACCAAGCGCCATGCCGACCACGTGCG...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCCGTGCCGCCGCACGTaGTCGGCATGGCGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGPCRRT*SAWRLV
Trigger: AACCAAGCGCCATGCCGACCACGTGCGGCGGCACGG...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGACCGTGCCGCCGCACGTaGTCGGCATGGCGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRPCRRT*SAWRLV
Trigger: AACCAAGCGCCATGCCGACCACGTGCGGCGGCACGG...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AGCCATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGAGCTCCTCCTTCCACTaGGTTGGGTTTGACCTCGGG +
Preference number: 4 (lower is better)
Translates to: SHQSSMGIYSEGKAWGKVSSSFH*VGFDLG
Trigger: CCCGAGGTCAAACCCAACCCAGTGGAAGGAGGAGCT...CACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616923.5
ENST00000650454.1
CDS-3UTR TCA 90 bp ATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCGGTAAAGCTTCTTCCTACTTGTaGCCAAAACCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: MQKSLPSDNQCLTHSLGKASSYL*PKPAPP
Trigger: CGGCGGCGCAGGTTTTGGTCACAAGTAGGAAGAAGC...TTTACCGAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR TCA 90 bp AAAATAAATATTAGCTTAGAGTCAGACCTAGAAGGGGACTTAATATCAGCCCTTCCCCTGGCGCCCAGGTaGCAGACCCTGGGTCCGACG +
Preference number: 4 (lower is better)
Translates to: KINISLESDLEGDLISALPLAPR*QTLGPT
Trigger: CGTCGGACCCAGGGTCTGTCACCTGGGCGCCAGGGG...AAGGGCTGATATTAAGTCCCCTTCTAGGTCTGACTCTAAGCTAATATTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR TCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCCTTGTGCCGGTCCTTaGCGGCGTGGTAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERPCAGP*RRGRCA
Trigger: TGCACATCTACCACGCCGTCAAGGACCGGCACAAGG...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTACCTCATCGCCCCACTTaGGAACGTCCTTGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVPHRPT*ERPCAG
Trigger: ACCGGCACAAGGACGTTCTCAAGTGGGGCGATGAGG...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp GGTAAACAGAGACAGGCTCCTGTATACTTTACTCAGGGGCAAGACAAACACAAGTTGAGAACGTCCTTGTaGCGGTCCTTGACGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GKQRQAPVYFTQGQDKHKLRTSL*RSLTAW
Trigger: CCACGCCGTCAAGGACCGGCACAAGGACGTTCTCAA...CTTGTGTTTGTCTTGCCCCTGAGTAAAGTATACAGGAGCCTGTCTCTGTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp AGCGACAATCAATGTCTGACACATAGCCTCGGTAAAAGGGAGATGCAGCACTCAGCCGGTCTGGTGCACTaGCTTCTTCCTACTTGTGAC +
Preference number: 4 (lower is better)
Translates to: SDNQCLTHSLGKREMQHSAGLVH*LLPTCD
Trigger: GTCACAAGTAGGAAGAAGCCAGTGCACCAGACCGGC...TGAGTGCTGCATCTCCCTTTTACCGAGGCTATGTGTCAGACATTGATTGTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CCA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACAGGTCGGCATGGCGCTTaGTTTCCTCCCAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LPKKALINFWLTGPENSTGRHGA*FPPSSA
Trigger: CGCTGAGCTGGGAGGAAACCAAGCGCCATGCCGACC...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTCGCACGTGGTCGGCATaGCGCTTGGTTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: YLPKKALINFWLTGPENSRTWSA*RLVSSQ
Trigger: CTGGGAGGAAACCAAGCGCCATGCCGACCACGTGCG...ACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp ACCACCTCACTAGCCTGTCACGAGATGGCAGTAAAAACTAGGCATATAAAAAGACCTTGTGCCGGTCCTTaGCGGCGTGGTAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: TTSLACHEMAVKTRHIKRPCAGP*RRGRCA
Trigger: TGCACATCTACCACGCCGTCAAGGACCGGCACAAGG...TCTTTTTATATGCCTAGTTTTTACTGCCATCTCGTGACAGGCTAGTGAGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR TCA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGTACACACGGGCTGGCTaGGAGGCATGGTACTGTAGC +
Preference number: 4 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMYTRAG*EAWYCS
Trigger: GCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTA...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGCAGCGAGCTCCGTaGTGTTCTGGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGLQRAP*CSGPCH
Trigger: GTGGCAAGGCCCAGAACAGCACGGAGCTCGCTGCAG...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACCTGCAGCGAGCTCCGTaGTGTTCTGGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENLQRAP*CSGPCH
Trigger: GTGGCAAGGCCCAGAACAGCACGGAGCTCGCTGCAG...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGAGGGTGTACTCCTCTaGAGCGAGCTCCGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTEGVLL*SELRAV
Trigger: AACAGCACGGAGCTCGCTGCAGAGGAGTACACCCTC...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp GCCTCAGATATACTGCAGGCTTGGAATGTCACCTGGAGACAGCAATTGCCCATTTCTTTGCCGGTCTGGTaGACTGGCTTCTTCCTACTT +
Preference number: 4 (lower is better)
Translates to: ASDILQAWNVTWRQQLPISLPVW*TGFFLL
Trigger: AAGTAGGAAGAAGCCAGTGCACCAGACCGGCAAAGA...AATGGGCAATTGCTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR GCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTATTGAGAACGTCCTTGTaGCGGTCCTTGACGGCGTGG +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVLRTSL*RSLTAW
Trigger: CCACGCCGTCAAGGACCGGCACAAGGACGTTCTCAA...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTAGCTCCGTGCTGTTCTaGGCCTTGCCACAACCATCC +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTSSVLF*ALPQPS
Trigger: GGATGGTTGTGGCAAGGCCCAGAACAGCACGGAGCT...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGAGCTCCGTGCTGTTCTaGGCCTTGCCACAACCATCC +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERSSVLF*ALPQPS
Trigger: GGATGGTTGTGGCAAGGCCCAGAACAGCACGGAGCT...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTAGCTCCTCCTTCCACTaGGTTGGGTTTGACCTCGGG +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTSSSFH*VGFDLG
Trigger: CCCGAGGTCAAACCCAACCCAGTGGAAGGAGGAGCT...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACCTCATCGCCCCACTTaGGAACGTCCTTGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKPHRPT*ERPCAG
Trigger: ACCGGCACAAGGACGTTCTCAAGTGGGGCGATGAGG...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTGGCCTCAACTGTATTaGACTCGGACATTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASWPQLY*TRTLFL
Trigger: GAGGAACAATGTCCGAGTTCAATACAGTTGAGGCCA...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp GCTAGACAGCTTTGCACAAATCCCTTGGATCACAAAATCATTGGAATACTTCCATCTGGGTCTTTGCACTaGGAGCAGTCAGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: ARQLCTNPLDHKIIGILPSGSLH*EQSGWR
Trigger: CCGCCAGCCTGACTGCTCTCAGTGCAAAGACCCAGA...TGGAAGTATTCCAATGATTTTGTGATCCAAGGGATTTGTGCAAAGCTGTCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR GCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTGGCCTCAGATATACTaGAGGCTTGGAATGTCACCT +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASWPQIY*RLGMSP
Trigger: AGGTGACATTCCAAGCCTGCAGTATATCTGAGGCCA...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTCCTGACCTCATGATCTaGTTGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTPDLMI*LPRPPK
Trigger: TTTGGGAGGCCGAGGCAAGCAGATCATGAGGTCAGG...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CCA 90 bp AGCGACAATCAATGTCTGACACATAGCCTCGGTAAAAGGGAGATGCAGCACTCATTCTCTTTGCCGGTCTaGTGCACTGGCTTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: SDNQCLTHSLGKREMQHSFSLPV*CTGFFL
Trigger: TAGGAAGAAGCCAGTGCACCAGACCGGCAAAGAGAA...TGAGTGCTGCATCTCCCTTTTACCGAGGCTATGTGTCAGACATTGATTGTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CCA 90 bp AGCTTCATCATCCTCAGTAAATGTTTCTATAAATGGAGATGGTGTATTCTTGTCCCGTGCCGCCGCACGTaGTCGGCATGGCGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SFIILSKCFYKWRWCILVPCRRT*SAWRLV
Trigger: AACCAAGCGCCATGCCGACCACGTGCGGCGGCACGG...GACAAGAATACACCATCTCCATTTATAGAAACATTTACTGAGGATGATGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CCA 90 bp AAAATAAATATTAGCTTAGAGTCAGACCTAGAAGGGGACTTAATATCAGCCCTTCCGTGCCGCCGCACGTaGTCGGCATGGCGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: KINISLESDLEGDLISALPCRRT*SAWRLV
Trigger: AACCAAGCGCCATGCCGACCACGTGCGGCGGCACGG...AAGGGCTGATATTAAGTCCCCTTCTAGGTCTGACTCTAAGCTAATATTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp GCCTCAGATATACTGCAGGCTTGGAATGTCACCTGGAGACAGCAATTGCCCATTGATATACTGCAGGCTTaGAATGTCACCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: ASDILQAWNVTWRQQLPIDILQA*NVTWRQ
Trigger: CTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATC...AATGGGCAATTGCTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTGATATACTGCAGGCTTaGAATGTCACCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASDILQA*NVTWRQ
Trigger: CTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATC...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACAAGCTCCTCCTTCCACTaGGTTGGGTTTGACCTCGGG +
Preference number: 4 (lower is better)
Translates to: LPKKALINFWLTGPENSTSSSFH*VGFDLG
Trigger: CCCGAGGTCAAACCCAACCCAGTGGAAGGAGGAGCT...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp GGTAAACAGAGACAGGCTCCTGTATACTTTACTCAGGGGCAAGACAAACACAAGAGGAAGGCTGGGTTCTaGGTCTTTGCACTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GKQRQAPVYFTQGQDKHKRKAGF*VFALRA
Trigger: TGCTCTCAGTGCAAAGACCCAGAACCCAGCCTTCCT...CTTGTGTTTGTCTTGCCCCTGAGTAAAGTATACAGGAGCCTGTCTCTGTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCATTATACACACGGGCTaGCTGAGAGGCATGGTACTG +
Preference number: 4 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTIIHTG*LRGMVL
Trigger: CAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAAT...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTATTATACACACGGGCTaGCTGAGAGGCATGGTACTG +
Preference number: 4 (lower is better)
Translates to: GLAERHGTVASSSIMHFSIIHTG*LRGMVL
Trigger: CAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAAT...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTCTCTAATAAAGAGATaGGCAACATGCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLAERHGTVASSSIMHFSSLIKR*ATCWAR
Trigger: CCTGGCCCAGCATGTTGCTCATCTCTTTATTAGAGA...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGTCTCCATCCAATGTCTaGGTTTGGAGGAGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERSPSNV*VWRRGL
Trigger: AAGCCCCCTCCTCCAAACTCAGACATTGGATGGAGA...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAAGCTTCTTCCTACTTGTaGCCAAAACCTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKASSYL*PKPAPP
Trigger: CGGCGGCGCAGGTTTTGGTCACAAGTAGGAAGAAGC...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR TCA 90 bp AAGGTATCTGGCCTCAGATATACTGCAGGCTTGGAATGTCACCTGGAGACAGCAGCGACAATCAATGTCTaGCACATAGCCTCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: KVSGLRYTAGLECHLETAATINV*HIASVK
Trigger: TTTTACCGAGGCTATGTGTCAGACATTGATTGTCGC...TGCTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCTGAGGCCAGATACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR TCA 90 bp AAAAGCCAACTGCAGGCTTTTGTGTGGCCACCTGATGGGTTCCATGCTCTTCCAGCCTCTCTGTATATTTaGAACTATACCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: KSQLQAFVWPPDGFHALPASLYI*NYTWRQ
Trigger: CTGTCTCCAGGTATAGTTTCAAATATACAGAGAGGC...TGGAAGAGCATGGAACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR TCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACGATCTCCTGACCTCATaGTCTGCTTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENDLLTS*SACLGL
Trigger: GAGGCCGAGGCAAGCAGATCATGAGGTCAGGAGATC...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR TCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGTACACACGGGCTGGCTaGGAGGCATGGTACTGTAGC +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGYTRAG*EAWYCS
Trigger: GCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTA...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTACAACCATCCACCACTaGATTGCCACCTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASTTIHH*IATFAN
Trigger: ATTTGCAAAGGTGGCAATGCAGTGGTGGATGGTTGT...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACGAGGGTGTACTCCTCTaGAGCGAGCTCCGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENEGVLL*SELRAV
Trigger: AACAGCACGGAGCTCGCTGCAGAGGAGTACACCCTC...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTCTTGTGACCAAAACCTaGGCCGCCGCGGAGCATGCC +
Preference number: 4 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSLVTKT*AAAEHA
Trigger: GGCATGCTCCGCGGCGGCGCAGGTTTTGGTCACAAG...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR GCA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAATTGAGAACGTCCTTGTaGCGGTCCTTGACGGCGTGG +
Preference number: 4 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKLRTSL*RSLTAW
Trigger: CCACGCCGTCAAGGACCGGCACAAGGACGTTCTCAA...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTGTAGTCAGGATGGTTTaGGATAAACTCCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASVVRMV*DKLPHP
Trigger: TGGATGAGGGAGTTTATCGCAAACCATCCTGACTAC...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACAGGTCTTCAGGGCTGGTaGCCAGAAGAAAAACCCGAG +
Preference number: 4 (lower is better)
Translates to: LPKKALINFWLTGPENSTGLQGW*PEEKPE
Trigger: CTCGGGTTTTTCTTCTGGGCACCAGCCCTGAAGACC...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CCA 90 bp ACCGTATATACCTTTGTGGTGAACAACAGAGTCTGTAGAACTATTAGTCATAGACGCACGTGGTCGGCATaGCGCTTGGTTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TVYTFVVNNRVCRTISHRRTWSA*RLVSSQ
Trigger: CTGGGAGGAAACCAAGCGCCATGCCGACCACGTGCG...TCTATGACTAATAGTTCTACAGACTCTGTTGTTCACCACAAAGGTATATACGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp CTACAGATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCCCAAACGTCATAAATTaGTCACCTCATCGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LQMQKSLPSDNQCLTHSLPNVIN*SPHRPT
Trigger: AGTGGGGCGATGAGGTGACCAATTTATGACGTTTGG...GAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCATCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CCA 90 bp CTACAGATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCGCTTGGAATGTCACCTaGAGACAGCAATTGCCCATT +
Preference number: 4 (lower is better)
Translates to: LQMQKSLPSDNQCLTHSLAWNVT*RQQLPI
Trigger: AATGGGCAATTGCTGTCTCCAGGTGACATTCCAAGC...GAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCATCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CCA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTGATATACTGCAGGCTTaGAATGTCACCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: GLAERHGTVASSSIMHFSDILQA*NVTWRQ
Trigger: CTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATC...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AGCCATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGCTCCAAAGGGTAGGATaGTTTGGGTTTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SHQSSMGIYSEGKAWGKVLQRVG*FGFVLS
Trigger: GGAAAGGACAAACCCAAACCATCCTACCCTTTGGAG...CACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp AGCCATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGGTAACTCCCATACTCTaGTCTCCAAAGGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: SHQSSMGIYSEGKAWGKVVTPIL*SPKGRM
Trigger: CATCCTACCCTTTGGAGACCAGAGTATGGGAGTTAC...CACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp TTTTGTACCGCTAGACAGCTTTGCACAAATCCCTTGGATCACAAAATCATTGGAAGCTCCTCCTTCCACTaGGTTGGGTTTGACCTCGGG +
Preference number: 4 (lower is better)
Translates to: FCTARQLCTNPLDHKIIGSSSFH*VGFDLG
Trigger: CCCGAGGTCAAACCCAACCCAGTGGAAGGAGGAGCT...TCCAATGATTTTGTGATCCAAGGGATTTGTGCAAAGCTGTCTAGCGGTACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp GGTAAACAGAGACAGGCTCCTGTATACTTTACTCAGGGGCAAGACAAACACAAGGAAAGAAGAGGGACTTaGAAGCTCCTCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: GKQRQAPVYFTQGQDKHKERRGT*KLLLPL
Trigger: CAGTGGAAGGAGGAGCTTCCAAGTCCCTCTTCTTTC...CTTGTGTTTGTCTTGCCCCTGAGTAAAGTATACAGGAGCCTGTCTCTGTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp ACAGAGCCAAAAGCCAACTGCAGGCTTTTGTGTGGCCACCTGATGGGTTCCATGGTTTATTGCTTCATCTaGAAAGAAGAGGGACTTGGA +
Preference number: 4 (lower is better)
Translates to: TEPKANCRLLCGHLMGSMVYCFI*KEEGLG
Trigger: TCCAAGTCCCTCTTCTTTCCAGATGAAGCAATAAAC...CATGGAACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGCTTTTGGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTGCCTTAATCAATTTCTaGCTCACTGGCCCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASALINF*LTGPEN
Trigger: GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGC...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTGCGACAATCAATGTCTaGCACATAGCCTCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: GLAERHGTVASSSIMHFSATINV*HIASVK
Trigger: TTTTACCGAGGCTATGTGTCAGACATTGATTGTCGC...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCAAGCTTGGGGCAAGGTaGCCAAGTGATTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTKLGAR*PSDYSN
Trigger: ATTGGAATAATCACTTGGTCACCTTGCCCCAAGCTT...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGTCTTTGCCGGTCTGGTaGACTGGCTTCTTCCTACTT +
Preference number: 4 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMSLPVW*TGFFLL
Trigger: AAGTAGGAAGAAGCCAGTGCACCAGACCGGCAAAGA...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR GCA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTCAGTCAGTGAGGGATaGAAAAGGGATTTGGACATG +
Preference number: 4 (lower is better)
Translates to: GLAERHGTVASSSIMHFSSVSEG*KRDLDM
Trigger: CATGTCCAAATCCCTTTTGCATCCCTCACTGACTGA...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGAGCTCCGTGCTGTTCTaGGCCTTGCCACAACCATCC +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMSSVLF*ALPQPS
Trigger: GGATGGTTGTGGCAAGGCCCAGAACAGCACGGAGCT...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCACTCCCTCATCCATCTaGCAACTGTCATTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTTPSSI*QLSLVL
Trigger: GAGAACTAATGACAGTTGCCAGATGGATGAGGGAGT...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAAGAGGCCCTCTAAGTaGCTAGGTCTTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENKRPSK*LGLQGW
Trigger: CCAGCCCTGAAGACCTAGCCACTTAGAGGGCCTCTT...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGACTGAGAGTAGGGGATaGCTTAGGTTTTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERTESRG*LRFWLG
Trigger: CCCAAGCCAAAACCTAAGCCATCCCCTACTCTCAGT...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CCA 90 bp AGCCATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGGCCTTAATCAATTTCTaGCTCACTGGCCCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SHQSSMGIYSEGKAWGKVALINF*LTGPEN
Trigger: GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGC...CACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR TCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGTCTCTAATAAAGAGATaGGCAACATGCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERSLIKR*ATCWAR
Trigger: CCTGGCCCAGCATGTTGCTCATCTCTTTATTAGAGA...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTAAAGGATCACTCTGGTaGGCAGTACCACAAACACCA +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTKGSLW*AVPQTP
Trigger: TGGTGTTTGTGGTACTGCTCACCAGAGTGATCCTTT...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAAAAGGATCACTCTGGTaGGCAGTACCACAAACACCA +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVKGSLW*AVPQTP
Trigger: TGGTGTTTGTGGTACTGCTCACCAGAGTGATCCTTT...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTGTTCTCATCAACCTTTaGCAGTGGAATGAGAAAATC +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASVLINL*QWNEKI
Trigger: GATTTTCTCATTCCACTGTCAAAGGTTGATGAGAAC...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGTGGTGTCTATGCTCATaGGGGTGTACTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGWCLCS*GCTPLQ
Trigger: CTGCAGAGGAGTACACCCTCATGAGCATAGACACCA...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGATGGTGTCTATGCTCATaGGGGTGTACTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRWCLCS*GCTPLQ
Trigger: CTGCAGAGGAGTACACCCTCATGAGCATAGACACCA...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp GGTAAACAGAGACAGGCTCCTGTATACTTTACTCAGGGGCAAGACAAACACAAGAGTTGCCCAAAAACCTaGGTAGTGACAGAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: GKQRQAPVYFTQGQDKHKSCPKT*VVTEPK
Trigger: TTTTGGCTCTGTCACTACTCAGGTTTTTGGGCAACT...CTTGTGTTTGTCTTGCCCCTGAGTAAAGTATACAGGAGCCTGTCTCTGTTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR TCA 90 bp TACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTAGAGGTGTCATGACATaGTGGACTTACGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: YLPKKALINFWLTGPENSRGVMT*WTYEAK
Trigger: CTTGGCCTCGTAAGTCCATCATGTCATGACACCTCT...ACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR TCA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAAATGCTCCCCAAGCAGTaGAGTCAGAGAAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKMLPKQ*SQRRKV
Trigger: CACCTTCCTTCTCTGACTTCACTGCTTGGGGAGCAT...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR TCA 90 bp AGCCATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGGGCAAGGTGACCAAGTaGTTATTCCAATTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: SHQSSMGIYSEGKAWGKVGKVTK*LFQLQK
Trigger: CTTTTGCAATTGGAATAATCACTTGGTCACCTTGCC...CACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTTGGCCTCAGATATACTaGAGGCTTGGAATGTCACCT +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTWPQIY*RLGMSP
Trigger: AGGTGACATTCCAAGCCTGCAGTATATCTGAGGCCA...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp AACAGAGACAGGCTCCTGTATACTTTACTCAGGGGCAAGACAAACACAAGCTGCGTACTGAAGCGAGGGTaGTTGTTTATTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: NRDRLLYTLLRGKTNTSCVLKRG*LFIASS
Trigger: AGATGAAGCAATAAACAAGCACCCTCGCTTCAGTAC...GCAGCTTGTGTTTGTCTTGCCCCTGAGTAAAGTATACAGGAGCCTGTCTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR GCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAATCACCCAGGAAGCCTaGACAAGGATGGTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRITQEA*TRMVGR
Trigger: CCTACCTACCATCCTTGTGCAGGCTTCCTGGGTGAT...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR GCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCCAGGAGATGATCAATaGCTTCCTGCAACAGCTGTT +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERPGDDQ*LPATAV
Trigger: AACAGCTGTTGCAGGAAGGCATTGATCATCTCCTGG...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTAGCTCCGTGCTGTTCTaGGCCTTGCCACAACCATCC +
Preference number: 4 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSSSVLF*ALPQPS
Trigger: GGATGGTTGTGGCAAGGCCCAGAACAGCACGGAGCT...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGCTTGGAATGTCACCTaGAGACAGCAATTGCCCATT +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTAWNVT*RQQLPI
Trigger: AATGGGCAATTGCTGTCTCCAGGTGACATTCCAAGC...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGAAGGGTAGGATGGTTTaGGTTTGTCCTTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERKGRMV*VCPFPL
Trigger: AAGGGGGAAAGGACAAACCCAAACCATCCTACCCTT...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAAAGGGTAGGATGGTTTaGGTTTGTCCTTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVKGRMV*VCPFPL
Trigger: AAGGGGGAAAGGACAAACCCAAACCATCCTACCCTT...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTACTCCAAAGGGTAGGATaGTTTGGGTTTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVLQRVG*FGFVLS
Trigger: GGAAAGGACAAACCCAAACCATCCTACCCTTTGGAG...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACATCCGTAGGGCTGTCCTaGTGTCCCTTCAATCATGTA +
Preference number: 4 (lower is better)
Translates to: LPKKALINFWLTGPENSTSVGLS*CPFNHV
Trigger: TACATGATTGAAGGGACACCAGGACAGCCCTACGGA...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AACAGAGACAGGCTCCTGTATACTTTACTCAGGGGCAAGACAAACACAAGCTGCCAGGACAGCCTAATCTaGGAAATGAAGTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: NRDRLLYTLLRGKTNTSCQDSLI*EMKLLC
Trigger: GCACAATAACTTCATTTCCCAGATTAGGCTGTCCTG...GCAGCTTGTGTTTGTCTTGCCCCTGAGTAAAGTATACAGGAGCCTGTCTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTCAGGACAGCCTAATCTaGGAAATGAAGTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: GLAERHGTVASSSIMHFSQDSLI*EMKLLC
Trigger: GCACAATAACTTCATTTCCCAGATTAGGCTGTCCTG...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp AGCCATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGTCAGAATACTACATCTaGTGTCCACATCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: SHQSSMGIYSEGKAWGKVSEYYI*CPHPLP
Trigger: TGGAAGTGGATGTGGACACCAGATGTAGTATTCTGA...CACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACCTAGGTCTTCAGGGCTaGTGCCCAGAAGAAAAACCC +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENLGLQG*CPEEKP
Trigger: GGGTTTTTCTTCTGGGCACCAGCCCTGAAGACCTAG...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR TCA 90 bp TACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATTCTCTAATAAAGAGATaGGCAACATGCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: YSSIIWSSYYTHGLAERHSLIKR*ATCWAR
Trigger: CCTGGCCCAGCATGTTGCTCATCTCTTTATTAGAGA...ATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGTGGTGTCTATGCTCATaGGGGTGTACTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMWCLCS*GCTPLQ
Trigger: CTGCAGAGGAGTACACCCTCATGAGCATAGACACCA...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTATAAACAGGGTTAGCTaGAGCAGCTTTATTGCAATC +
Preference number: 4 (lower is better)
Translates to: GLAERHGTVASSSIMHFSINRVS*SSFIAI
Trigger: GATTGCAATAAAGCTGCTTCAGCTAACCCTGTTTAT...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTCAAAGTCTGTTAATTaGACCTCCATGGGTCGAAAT +
Preference number: 4 (lower is better)
Translates to: GLAERHGTVASSSIMHFSSKSVN*TSMGRN
Trigger: ATTTCGACCCATGGAGGTGCAATTAACAGACTTTGA...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCAGCATCTCTTTTCTGTaGTACCTTCATGTTCTCATC +
Preference number: 4 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTSISFL*YLHVLI
Trigger: GATGAGAACATGAAGGTAGCACAGAAAAGAGATGCT...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTACAACCATCCACCACTaGATTGCCACCTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTTTIHH*IATFAN
Trigger: ATTTGCAAAGGTGGCAATGCAGTGGTGGATGGTTGT...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp TGCAGCACTCAAAGCCATAACAATTGGACAGATAGTAGCCAACTGATCATAAAGCCTGGAGACAGCAATTaGCCATTCCAAATCCCATGG +
Preference number: 4 (lower is better)
Translates to: CSTQSHNNWTDSSQLIIKPGDSN*PFQIPW
Trigger: CCATGGGATTTGGAATGGGCAATTGCTGTCTCCAGG...CTTTATGATCAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTGAGTGCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR GCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCCTGGAGACAGCAATTaGCCATTCCAAATCCCATGG +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGPGDSN*PFQIPW
Trigger: CCATGGGATTTGGAATGGGCAATTGCTGTCTCCAGG...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACCCTGGAGACAGCAATTaGCCATTCCAAATCCCATGG +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENPGDSN*PFQIPW
Trigger: CCATGGGATTTGGAATGGGCAATTGCTGTCTCCAGG...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACATGGCCTCAGATATACTaGAGGCTTGGAATGTCACCT +
Preference number: 4 (lower is better)
Translates to: LPKKALINFWLTGPENSTWPQIY*RLGMSP
Trigger: AGGTGACATTCCAAGCCTGCAGTATATCTGAGGCCA...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp AAAAGCCAACTGCAGGCTTTTGTGTGGCCACCTGATGGGTTCCATGCTCTTCCAATGGATGGAACACTTTaGCTCTCTGTATATTTGAAA +
Preference number: 4 (lower is better)
Translates to: KSQLQAFVWPPDGFHALPMDGTL*LSVYLK
Trigger: TTTCAAATATACAGAGAGGCAAAGTGTTCCATCCAT...TGGAAGAGCATGGAACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR GCA 90 bp GCTAGACAGCTTTGCACAAATCCCTTGGATCACAAAATCATTGGAATACTTCCACACAAGAAGTGTGTGTaGACGCTGCAGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: ARQLCTNPLDHKIIGILPHKKCV*TLQLFQ
Trigger: CTGAAACAGCTGCAGCGTGCACACACACTTCTTGTG...TGGAAGTATTCCAATGATTTTGTGATCCAAGGGATTTGTGCAAAGCTGTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR GCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGTAGTCAGGATGGTTTaGGATAAACTCCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVVVRMV*DKLPHP
Trigger: TGGATGAGGGAGTTTATCGCAAACCATCCTGACTAC...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGAAGGAATCATTAGCATaGTCCCCAAGCAGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERKESLA*SPSSEV
Trigger: GACTTCACTGCTTGGGGAGCATGCTAATGATTCCTT...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR GCA 90 bp TACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATCCAGGAGATGATCAATaGCTTCCTGCAACAGCTGTT +
Preference number: 4 (lower is better)
Translates to: YSSIIWSSYYTHGLAERHPGDDQ*LPATAV
Trigger: AACAGCTGTTGCAGGAAGGCATTGATCATCTCCTGG...ATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGATTCTCTTTGCCGGTCTaGTGCACTGGCTTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRFSLPV*CTGFFL
Trigger: TAGGAAGAAGCCAGTGCACCAGACCGGCAAAGAGAA...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR CCA 90 bp GCCTCAGATATACTGCAGGCTTGGAATGTCACCTGGAGACAGCAATTGCCCATTCCATTCCAAATCCCATaGCATCCATGTAAATATGAT +
Preference number: 4 (lower is better)
Translates to: ASDILQAWNVTWRQQLPIPFQIP*HPCKYD
Trigger: ATCATATTTACATGGATGCCATGGGATTTGGAATGG...AATGGGCAATTGCTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCTGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGATCCGTAGGGCTGTCCTaGTGTCCCTTCAATCATGTA +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRSVGLS*CPFNHV
Trigger: TACATGATTGAAGGGACACCAGGACAGCCCTACGGA...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAAGAAAGAAGAGGGACTTaGAAGCTCCTCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKERRGT*KLLLPL
Trigger: CAGTGGAAGGAGGAGCTTCCAAGTCCCTCTTCTTTC...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGAAAGAAGAGGGACTTaGAAGCTCCTCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRERRGT*KLLLPL
Trigger: CAGTGGAAGGAGGAGCTTCCAAGTCCCTCTTCTTTC...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGAGTTGTAGAAAGACCTaGGGAGTAGGCTCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERSCRKT*GVGSEN
Trigger: ATTCTCTGAGCCTACTCCCCAGGTCTTTCTACAACT...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CCA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCGATATACTGCAGGCTTaGAATGTCACCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTDILQA*NVTCLR
Trigger: TCTTAAACAGGTGACATTCCAAGCCTGCAGTATATC...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGATTATACACACGGGCTaGCTGAGAGGCATGGTACTG +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGIIHTG*LRGMVL
Trigger: CAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAAT...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTACAATTTCTGGCTCACTaGCCCAGAAAACAGTACAGT +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVQFLAH*PRKQYS
Trigger: ACTGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTG...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGGCCTTAATCAATTTCTaGCTCACTGGCCCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERALINF*LTGPEN
Trigger: GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGC...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAAAAAGGATCACTCTGGTaGGCAGTACCACAAACACCA +
Preference number: 4 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKKGSLW*AVPQTP
Trigger: TGGTGTTTGTGGTACTGCTCACCAGAGTGATCCTTT...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTTGGTGTCTATGCTCATaGGGGTGTACTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSWCLCS*GCTPLQ
Trigger: CTGCAGAGGAGTACACCCTCATGAGCATAGACACCA...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR TCA 90 bp TACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGCGACAATCAATGTCTaGCACATAGCCTCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: YSSIIWSSYYTHGLAERHATINV*HIASVK
Trigger: TTTTACCGAGGCTATGTGTCAGACATTGATTGTCGC...ATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTGCTCAGAGAATGTCCTaGAGATGGGGAGATCACCCA +
Preference number: 4 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSAQRMS*RWGDHP
Trigger: TGGGTGATCTCCCCATCTTCAGGACATTCTCTGAGC...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR TCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTACCCAAGATTACCCTTaGAGCACTTTCAATGGATTC +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTTQDYP*STFNGF
Trigger: GAATCCATTGAAAGTGCTTCAAGGGTAATCTTGGGT...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR TCA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGGCAAGGTGACCAAGTaGTTATTCCAATTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMGKVTK*LFQLQK
Trigger: CTTTTGCAATTGGAATAATCACTTGGTCACCTTGCC...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTACATCCACCACTGCATTaGCACCTTTGCAAATATCTT +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVHPPLH*HLCKYL
Trigger: AAGATATTTGCAAAGGTGGCAATGCAGTGGTGGATG...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACAACAACCATCCACCACTaGATTGCCACCTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: LPKKALINFWLTGPENSTTTIHH*IATFAN
Trigger: ATTTGCAAAGGTGGCAATGCAGTGGTGGATGGTTGT...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGCCTGGAGACAGCAATTaGCCATTCCAAATCCCATGG +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMPGDSN*PFQIPW
Trigger: CCATGGGATTTGGAATGGGCAATTGCTGTCTCCAGG...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp TGCAGCACTCAAAGCCATAACAATTGGACAGATAGTAGCCAACTGATCATAAAGTGGCCTCAGATATACTaGAGGCTTGGAATGTCACCT +
Preference number: 4 (lower is better)
Translates to: CSTQSHNNWTDSSQLIIKWPQIY*RLGMSP
Trigger: AGGTGACATTCCAAGCCTGCAGTATATCTGAGGCCA...CTTTATGATCAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTGAGTGCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR GCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGGTACTGAAGCGAGGGTaGTTGTTTATTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERVLKRG*LFIASS
Trigger: AGATGAAGCAATAAACAAGCACCCTCGCTTCAGTAC...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACCAGGAGATGATCAATaGCTTCCTGCAACAGCTGTT +
Preference number: 4 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKPGDDQ*LPATAV
Trigger: AACAGCTGTTGCAGGAAGGCATTGATCATCTCCTGG...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGTTAATTGCACCTCCATaGGTCGAAATTCTACTCTCC +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERLIAPP*VEILLS
Trigger: GGAGAGTAGAATTTCGACCCATGGAGGTGCAATTAA...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGGCTTGGAATGTCACCTaGAGACAGCAATTGCCCATT +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGAWNVT*RQQLPI
Trigger: AATGGGCAATTGCTGTCTCCAGGTGACATTCCAAGC...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACCTCCAAAGGGTAGGATaGTTTGGGTTTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENLQRVG*FGFVLS
Trigger: GGAAAGGACAAACCCAAACCATCCTACCCTTTGGAG...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp GCTAGACAGCTTTGCACAAATCCCTTGGATCACAAAATCATTGGAATACTTCCAGTAACTCCCATACTCTaGTCTCCAAAGGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: ARQLCTNPLDHKIIGILPVTPIL*SPKGRM
Trigger: CATCCTACCCTTTGGAGACCAGAGTATGGGAGTTAC...TGGAAGTATTCCAATGATTTTGTGATCCAAGGGATTTGTGCAAAGCTGTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAAGTAACTCCCATACTCTaGTCTCCAAAGGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKVTPIL*SPKGRM
Trigger: CATCCTACCCTTTGGAGACCAGAGTATGGGAGTTAC...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAAGAGTTCAGAATTaGGATCAGTCCAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTVRVQN*DQSRKH
Trigger: GTGTTTCCTGGACTGATCCCAATTCTGAACTCTTAC...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGGTAAGAGTTCAGAATTaGGATCAGTCCAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERVRVQN*DQSRKH
Trigger: GTGTTTCCTGGACTGATCCCAATTCTGAACTCTTAC...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACTCCCTCATCCATCTaGCAACTGTCATTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: YLPKKALINFWLTGPENSTPSSI*QLSLVL
Trigger: GAGAACTAATGACAGTTGCCAGATGGATGAGGGAGT...ACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTTTTCAAACTTCACTaGTGGCAGTATGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMVFKLH*WQYGEE
Trigger: CTCTTCACCATACTGCCACCAGTGAAGTTTGAAAAC...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGGCCCACCACCACGACTaGCTAATTTTGTTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERAHHHD*LILFLY
Trigger: ATACAAAAACAAAATTAGCCAGTCGTGGTGGTGGGC...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATTTTCTCTTCTACTaGCTTGTTGCCTTCCTATCC +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERHFLFY*LVAFLS
Trigger: GGATAGGAAGGCAACAAGCCAGTAGAAGAGAAAATG...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTGTAGAATGTCTAGTTaGATGAGTCAGTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASCRMSS*MSQFYF
Trigger: GAAGTAAAACTGACTCATCCAACTAGACATTCTACA...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTATTATACACACGGGCTaGCTGAGAGGCATGGTACTG +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAIIHTG*LRGMVL
Trigger: CAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAAT...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTCAATTTCTGGCTCACTaGCCCAGAAAACAGTACAGT +
Preference number: 4 (lower is better)
Translates to: YLPKKALINFWLTGPENSQFLAH*PRKQYS
Trigger: ACTGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTG...ACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTAAAATCTGGAGTGAATaGCTTTTAGAGGAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: WSSYYTHGLAERHGTVASKIWSE*LLEESL
Trigger: TAGACTTTCCTCTAAAAGCCATTCACTCCAGATTTT...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTAACATGTATTCCACCTaGACCGTGGAGATCCGCATG +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLANMYST*TVEIRM
Trigger: CATGCGGATCTCCACGGTCCAGGTGGAATACATGTT...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616923.5
3UTR CAA 72 bp TCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTaGGGGCAAGGTGACCAAGTGATTATTCCAATTGCA +
Preference number: 4 (lower is better)
Translates to: SEFNGYLFRGES*GQGDQVIIPIA
Trigger: TGCAATTGGAATAATCACTTGGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR TCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTTCTCTAATAAAGAGATaGGCAACATGCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLASLIKR*ATCWAR
Trigger: CCTGGCCCAGCATGTTGCTCATCTCTTTATTAGAGA...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTAAAGGATCACTCTGGTaGGCAGTACCACAAACACCA +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAKGSLW*AVPQTP
Trigger: TGGTGTTTGTGGTACTGCTCACCAGAGTGATCCTTT...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGTTCTCATCAACCTTTaGCAGTGGAATGAGAAAATC +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVVLINL*QWNEKI
Trigger: GATTTTCTCATTCCACTGTCAAAGGTTGATGAGAAC...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTTCTCATCAACCTTTaGCAGTGGAATGAGAAAATC +
Preference number: 4 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMVLINL*QWNEKI
Trigger: GATTTTCTCATTCCACTGTCAAAGGTTGATGAGAAC...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGGCGACAATCAATGTCTaGCACATAGCCTCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGATINV*HIASVK
Trigger: TTTTACCGAGGCTATGTGTCAGACATTGATTGTCGC...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGTGGCCTCAACTGTATTaGACTCGGACATTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMWPQLY*TRTLFL
Trigger: GAGGAACAATGTCCGAGTTCAATACAGTTGAGGCCA...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp GGTAAACAGAGACAGGCTCCTGTATACTTTACTCAGGGGCAAGACAAACACAAGTATATACCTTTGTGGTaGACAACAGAGTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: GKQRQAPVYFTQGQDKHKYIPLW*TTESVE
Trigger: TTCTACAGACTCTGTTGTTCACCACAAAGGTATATA...CTTGTGTTTGTCTTGCCCCTGAGTAAAGTATACAGGAGCCTGTCTCTGTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR TCA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACAGGCAAGGTGACCAAGTaGTTATTCCAATTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LPKKALINFWLTGPENSTGKVTK*LFQLQK
Trigger: CTTTTGCAATTGGAATAATCACTTGGTCACCTTGCC...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR TCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAAAGCTTGGGGCAAGGTaGCCAAGTGATTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRKLGAR*PSDYSN
Trigger: ATTGGAATAATCACTTGGTCACCTTGCCCCAAGCTT...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR TCA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGATAAACAGGGTTAGCTaGAGCAGCTTTATTGCAATC +
Preference number: 4 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMINRVS*SSFIAI
Trigger: GATTGCAATAAAGCTGCTTCAGCTAACCCTGTTTAT...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR TCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGATAAACAGGGTTAGCTaGAGCAGCTTTATTGCAATC +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERINRVS*SSFIAI
Trigger: GATTGCAATAAAGCTGCTTCAGCTAACCCTGTTTAT...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACACATCCACCACTGCATTaGCACCTTTGCAAATATCTT +
Preference number: 4 (lower is better)
Translates to: LPKKALINFWLTGPENSTHPPLH*HLCKYL
Trigger: AAGATATTTGCAAAGGTGGCAATGCAGTGGTGGATG...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGACAACCATCCACCACTaGATTGCCACCTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGTTIHH*IATFAN
Trigger: ATTTGCAAAGGTGGCAATGCAGTGGTGGATGGTTGT...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGTGGCCTCAGATATACTaGAGGCTTGGAATGTCACCT +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMWPQIY*RLGMSP
Trigger: AGGTGACATTCCAAGCCTGCAGTATATCTGAGGCCA...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGTAGTCAGGATGGTTTaGGATAAACTCCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRVVRMV*DKLPHP
Trigger: TGGATGAGGGAGTTTATCGCAAACCATCCTGACTAC...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCTTTACACAAGCAAATTaGAAACGAAAACCAGGCATT +
Preference number: 4 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTFTQAN*KRKPGI
Trigger: AATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAA...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGCTTGGAATGTCACCTaGAGACAGCAATTGCCCATT +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAAWNVT*RQQLPI
Trigger: AATGGGCAATTGCTGTCTCCAGGTGACATTCCAAGC...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGGATATACTGCAGGCTTaGAATGTCACCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMDILQA*NVTWRQ
Trigger: CTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATC...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCAAAGCCATAACAATTaGACAGATAGTAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERQSHNN*TDSSQL
Trigger: CAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTG...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGAAGGGTAGGATGGTTTaGGTTTGTCCTTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMKGRMV*VCPFPL
Trigger: AAGGGGGAAAGGACAAACCCAAACCATCCTACCCTT...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGTAACTCCCATACTCTaGTCTCCAAAGGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAVTPIL*SPKGRM
Trigger: CATCCTACCCTTTGGAGACCAGAGTATGGGAGTTAC...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTGAAAGAAGAGGGACTTaGAAGCTCCTCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSERRGT*KLLLPL
Trigger: CAGTGGAAGGAGGAGCTTCCAAGTCCCTCTTCTTTC...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGGTTTATTGCTTCATCTaGAAAGAAGAGGGACTTGGA +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERVYCFI*KEEGLG
Trigger: TCCAAGTCCCTCTTCTTTCCAGATGAAGCAATAAAC...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATTCAGAATACTACATCTaGTGTCCACATCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: YSSIIWSSYYTHGLAERHSEYYI*CPHPLP
Trigger: TGGAAGTGGATGTGGACACCAGATGTAGTATTCTGA...ATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACACTCCCTCATCCATCTaGCAACTGTCATTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENTPSSI*QLSLVL
Trigger: GAGAACTAATGACAGTTGCCAGATGGATGAGGGAGT...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGACTCCCTCATCCATCTaGCAACTGTCATTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGTPSSI*QLSLVL
Trigger: GAGAACTAATGACAGTTGCCAGATGGATGAGGGAGT...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTGTAGAATGTCTAGTTaGATGAGTCAGTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: GLAERHGTVASSSIMHFSCRMSS*MSQFYF
Trigger: GAAGTAAAACTGACTCATCCAACTAGACATTCTACA...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAATTTCTGGCTCACTaGCCCAGAAAACAGTACAGT +
Preference number: 4 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKQFLAH*PRKQYS
Trigger: ACTGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTG...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGGCGACAATCAATGTCTaGCACATAGCCTCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMATINV*HIASVK
Trigger: TTTTACCGAGGCTATGTGTCAGACATTGATTGTCGC...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTTGGCCTCAACTGTATTaGACTCGGACATTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSWPQLY*TRTLFL
Trigger: GAGGAACAATGTCCGAGTTCAATACAGTTGAGGCCA...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616923.5
ENST00000650454.1
CDS-3UTR TCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTTCATTTCATCAGTTATaGCACTGTCTTGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTSFHQL*HCLACS
Trigger: ACTACAAGCAAGACAGTGTCATAACTGATGAAATGA...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTATCATTTCATCAGTTATaGCACTGTCTTGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVSFHQL*HCLACS
Trigger: ACTACAAGCAAGACAGTGTCATAACTGATGAAATGA...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGGATAAAGAGGTGTCATaGCATGATGGACTTACGAGG +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMDKEVS*HDGLTR
Trigger: CCTCGTAAGTCCATCATGTCATGACACCTCTTTATC...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR TCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTTATCCCTTCAGTCAGTaGGGGATGCAAAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAYPFSQ*GMQKGF
Trigger: AAATCCCTTTTGCATCCCTCACTGACTGAAGGGATA...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR TCA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGACACAGACATACGATaGTGTTTAGCAAAGCATTTT +
Preference number: 4 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVDTDIR*CLAKHF
Trigger: AAAATGCTTTGCTAAACATCATCGTATGTCTGTGTC...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR TCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAACCCAAGATTACCCTTaGAGCACTTTCAATGGATTC +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRTQDYP*STFNGF
Trigger: GAATCCATTGAAAGTGCTTCAAGGGTAATCTTGGGT...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR TCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGAAGCTTGGGGCAAGGTaGCCAAGTGATTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMKLGAR*PSDYSN
Trigger: ATTGGAATAATCACTTGGTCACCTTGCCCCAAGCTT...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp TACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTTCAAAGTCTGTTAATTaGACCTCCATGGGTCGAAAT +
Preference number: 4 (lower is better)
Translates to: YLPKKALINFWLTGPENSSKSVN*TSMGRN
Trigger: ATTTCGACCCATGGAGGTGCAATTAACAGACTTTGA...ACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACATCAAAGTCTGTTAATTaGACCTCCATGGGTCGAAAT +
Preference number: 4 (lower is better)
Translates to: LPKKALINFWLTGPENSTSKSVN*TSMGRN
Trigger: ATTTCGACCCATGGAGGTGCAATTAACAGACTTTGA...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGACATCCACCACTGCATTaGCACCTTTGCAAATATCTT +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRHPPLH*HLCKYL
Trigger: AAGATATTTGCAAAGGTGGCAATGCAGTGGTGGATG...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGTACTGAAGCGAGGGTaGTTGTTTATTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRVLKRG*LFIASS
Trigger: AGATGAAGCAATAAACAAGCACCCTCGCTTCAGTAC...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGTAGTCAGGATGGTTTaGGATAAACTCCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAVVRMV*DKLPHP
Trigger: TGGATGAGGGAGTTTATCGCAAACCATCCTGACTAC...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTCTTCTACTGGCTTGTTaGCTTCCTATCCCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSLLLAC*LPIPSV
Trigger: GACTGAAGGGATAGGAAGGCAACAAGCCAGTAGAAG...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR GCA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTCCAGGAGATGATCAATaGCTTCCTGCAACAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSPGDDQ*LPATAV
Trigger: AACAGCTGTTGCAGGAAGGCATTGATCATCTCCTGG...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGTTCAAACAGTGTCAGTaGGTCTCTAATAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMFKQCQ*VSNKEM
Trigger: CATCTCTTTATTAGAGACCCACTGACACTGTTTGAA...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGCCATTCCAAATCCCATaGCATCCATGTAAATATGAT +
Preference number: 4 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMPFQIP*HPCKYD
Trigger: ATCATATTTACATGGATGCCATGGGATTTGGAATGG...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACACAAAGCCATAACAATTaGACAGATAGTAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: LPKKALINFWLTGPENSTQSHNN*TDSSQL
Trigger: CAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTG...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp ACCGTATATACCTTTGTGGTGAACAACAGAGTCTGTAGAACTATTAGTCATAGACTCCAAAGGGTAGGATaGTTTGGGTTTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TVYTFVVNNRVCRTISHRLQRVG*FGFVLS
Trigger: GGAAAGGACAAACCCAAACCATCCTACCCTTTGGAG...TCTATGACTAATAGTTCTACAGACTCTGTTGTTCACCACAAAGGTATATACGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp TACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGTTTATTGCTTCATCTaGAAAGAAGAGGGACTTGGA +
Preference number: 4 (lower is better)
Translates to: YSSIIWSSYYTHGLAERHVYCFI*KEEGLG
Trigger: TCCAAGTCCCTCTTCTTTCCAGATGAAGCAATAAAC...ATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTGTTTATTGCTTCATCTaGAAAGAAGAGGGACTTGGA +
Preference number: 4 (lower is better)
Translates to: YLPKKALINFWLTGPENSVYCFI*KEEGLG
Trigger: TCCAAGTCCCTCTTCTTTCCAGATGAAGCAATAAAC...ACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGTAAGAGTTCAGAATTaGGATCAGTCCAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRVRVQN*DQSRKH
Trigger: GTGTTTCCTGGACTGATCCCAATTCTGAACTCTTAC...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGATCAGAATACTACATCTaGTGTCCACATCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRSEYYI*CPHPLP
Trigger: TGGAAGTGGATGTGGACACCAGATGTAGTATTCTGA...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGTCAGAATACTACATCTaGTGTCCACATCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGSEYYI*CPHPLP
Trigger: TGGAAGTGGATGTGGACACCAGATGTAGTATTCTGA...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTCAATTTCTGGCTCACTaGCCCAGAAAACAGTACAGT +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAQFLAH*PRKQYS
Trigger: ACTGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTG...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACGAATGTCTAGTTGGATaGGTCAGTTTTACTTCCACT +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENECLVG*VSFTST
Trigger: AGTGGAAGTAAAACTGACTCATCCAACTAGACATTC...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGGAATGTCTAGTTGGATaGGTCAGTTTTACTTCCACT +
Preference number: 4 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGECLVG*VSFTST
Trigger: AGTGGAAGTAAAACTGACTCATCCAACTAGACATTC...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGAATGTCTAGTTGGATaGGTCAGTTTTACTTCCACT +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRECLVG*VSFTST
Trigger: AGTGGAAGTAAAACTGACTCATCCAACTAGACATTC...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGACCCAAGATTACCCTTaGAGCACTTTCAATGGATTC +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMTQDYP*STFNGF
Trigger: GAATCCATTGAAAGTGCTTCAAGGGTAATCTTGGGT...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACTCAAAGTCTGTTAATTaGACCTCCATGGGTCGAAAT +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENSKSVN*TSMGRN
Trigger: ATTTCGACCCATGGAGGTGCAATTAACAGACTTTGA...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTCATCCACCACTGCATTaGCACCTTTGCAAATATCTT +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAHPPLH*HLCKYL
Trigger: AAGATATTTGCAAAGGTGGCAATGCAGTGGTGGATG...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGTACTGAAGCGAGGGTaGTTGTTTATTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAVLKRG*LFIASS
Trigger: AGATGAAGCAATAAACAAGCACCCTCGCTTCAGTAC...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR GCA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGATGCCTGTAAAGATCTaGATAATCTACAATACAGAG +
Preference number: 4 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERMPVKI*IIYNTE
Trigger: CTCTGTATTGTAGATTATGCAGATCTTTACAGGCAT...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTTTTACACAAGCAAATTaGAAACGAAAACCAGGCATT +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTFTQAN*KRKPGI
Trigger: AATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAA...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp TACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATTTCAAACAGTGTCAGTaGGTCTCTAATAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: YSSIIWSSYYTHGLAERHFKQCQ*VSNKEM
Trigger: CATCTCTTTATTAGAGACCCACTGACACTGTTTGAA...ATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CAAAGCCATAACAATTGGACAGATAGTAGCCAACTGATCATAAAGGTATCTGGCCAAAGCCATAACAATTaGACAGATAGTAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: QSHNNWTDSSQLIIKVSGQSHNN*TDSSQL
Trigger: CAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTG...GCCAGATACCTTTATGATCAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CCA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAAAGCCATAACAATTaGACAGATAGTAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKQSHNN*TDSSQL
Trigger: CAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTG...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACCAAAGCCATAACAATTaGACAGATAGTAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENQSHNN*TDSSQL
Trigger: CAGTTGGCTACTATCTGTCCAATTGTTATGGCTTTG...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AAAATAAATATTAGCTTAGAGTCAGACCTAGAAGGGGACTTAATATCAGCCCTTAAGGGTAGGATGGTTTaGGTTTGTCCTTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: KINISLESDLEGDLISALKGRMV*VCPFPL
Trigger: AAGGGGGAAAGGACAAACCCAAACCATCCTACCCTT...AAGGGCTGATATTAAGTCCCCTTCTAGGTCTGACTCTAAGCTAATATTTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTCAGGACAGCCTAATCTaGGAAATGAAGTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAQDSLI*EMKLLC
Trigger: GCACAATAACTTCATTTCCCAGATTAGGCTGTCCTG...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp ACCACCTCACTAGCCTGTCACGAGATGGCAGTAAAAACTAGGCATATAAAAAGAGGATCACAAAATCATTaGAATACTTCCATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TTSLACHEMAVKTRHIKRGSQNH*NTSIRA
Trigger: AGCTCTGATGGAAGTATTCCAATGATTTTGTGATCC...TCTTTTTATATGCCTAGTTTTTACTGCCATCTCGTGACAGGCTAGTGAGGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGTAAGAGTTCAGAATTaGGATCAGTCCAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAVRVQN*DQSRKH
Trigger: GTGTTTCCTGGACTGATCCCAATTCTGAACTCTTAC...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTAAAATCTGGAGTGAATaGCTTTTAGAGGAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTKIWSE*LLEESL
Trigger: TAGACTTTCCTCTAAAAGCCATTCACTCCAGATTTT...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR TCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACTCATTTCATCAGTTATaGCACTGTCTTGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENSFHQL*HCLACS
Trigger: ACTACAAGCAAGACAGTGTCATAACTGATGAAATGA...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGATCATTTCATCAGTTATaGCACTGTCTTGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRSFHQL*HCLACS
Trigger: ACTACAAGCAAGACAGTGTCATAACTGATGAAATGA...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGGAATGTCTAGTTGGATaGGTCAGTTTTACTTCCACT +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMECLVG*VSFTST
Trigger: AGTGGAAGTAAAACTGACTCATCCAACTAGACATTC...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGATTCAAACAGTGTCAGTaGGTCTCTAATAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRFKQCQ*VSNKEM
Trigger: CATCTCTTTATTAGAGACCCACTGACACTGTTTGAA...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp GCTAGACAGCTTTGCACAAATCCCTTGGATCACAAAATCATTGGAATACTTCCACCATTCCAAATCCCATaGCATCCATGTAAATATGAT +
Preference number: 4 (lower is better)
Translates to: ARQLCTNPLDHKIIGILPPFQIP*HPCKYD
Trigger: ATCATATTTACATGGATGCCATGGGATTTGGAATGG...TGGAAGTATTCCAATGATTTTGTGATCCAAGGGATTTGTGCAAAGCTGTCTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACCATTCCAAATCCCATaGCATCCATGTAAATATGAT +
Preference number: 4 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKPFQIP*HPCKYD
Trigger: ATCATATTTACATGGATGCCATGGGATTTGGAATGG...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTTTCAAACTTCACTGGTaGCAGTATGGTGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSFKLHW*QYGEEL
Trigger: AAGCTCTTCACCATACTGCCACCAGTGAAGTTTGAA...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR GCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACATGCCTGTAAAGATCTaGATAATCTACAATACAGAG +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENMPVKI*IIYNTE
Trigger: CTCTGTATTGTAGATTATGCAGATCTTTACAGGCAT...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTTTCAAACAGTGTCAGTaGGTCTCTAATAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAFKQCQ*VSNKEM
Trigger: CATCTCTTTATTAGAGACCCACTGACACTGTTTGAA...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CCA 90 bp TTTTGTACCGCTAGACAGCTTTGCACAAATCCCTTGGATCACAAAATCATTGGATTTGCACAAATCCCTTaGATCACAAAATCATTGGAA +
Preference number: 4 (lower is better)
Translates to: FCTARQLCTNPLDHKIIGFAQIP*ITKSLE
Trigger: TTCCAATGATTTTGTGATCCAAGGGATTTGTGCAAA...TCCAATGATTTTGTGATCCAAGGGATTTGTGCAAAGCTGTCTAGCGGTACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAAAATCTGGAGTGAATaGCTTTTAGAGGAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: IYLPKKALINFWLTGPENKIWSE*LLEESL
Trigger: TAGACTTTCCTCTAAAAGCCATTCACTCCAGATTTT...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGATGCCTGTAAAGATCTaGATAATCTACAATACAGAG +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMMPVKI*IIYNTE
Trigger: CTCTGTATTGTAGATTATGCAGATCTTTACAGGCAT...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR GCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGTTTACACAAGCAAATTaGAAACGAAAACCAGGCATT +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMFTQAN*KRKPGI
Trigger: AATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAA...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CCA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGTGTAGAATGTCTAGTTaGATGAGTCAGTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMCRMSS*MSQFYF
Trigger: GAAGTAAAACTGACTCATCCAACTAGACATTCTACA...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR TCA 90 bp AAAATAAATATTAGCTTAGAGTCAGACCTAGAAGGGGACTTAATATCAGCCCTTCAGAATGGAAAAATCTaGTTCCAGCATTCAATTTGG +
Preference number: 4 (lower is better)
Translates to: KINISLESDLEGDLISALQNGKI*FQHSIW
Trigger: CCAAATTGAATGCTGGAATCAGATTTTTCCATTCTG...AAGGGCTGATATTAAGTCCCCTTCTAGGTCTGACTCTAAGCTAATATTTATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CCA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTTGTAGAATGTCTAGTTaGATGAGTCAGTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSCRMSS*MSQFYF
Trigger: GAAGTAAAACTGACTCATCCAACTAGACATTCTACA...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
3UTR CAA 72 bp TATCTGCCTTTTTACAACCTGATTTACACAAGCAAATaGCAAACGAAAACCAGGCATTCTTTAATCATCCAA +
Preference number: 4 (lower is better)
Translates to: YLPFYNLIYTSK*QTKTRHSLIIQ
Trigger: TTGGATGATTAAAGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGGCAGATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS GCA 90 bp CCTCCTCCCGCTCCGATGCGGCGGCGGCGGACCCCACGGCCGCGCTaGCGCGGCGGCTCCCGCTTCTCTTTGCCGGTCTGGTGCACTGGC +
Preference number: 5 (lower is better)
Translates to: PPPAPMRRRRTPRPR*RGGSRFSLPVWCTG
Trigger: GCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGCCGCCGCGGCAGCGCGGCCGTGGGGTCCGCCGCCGCCGCATCGGAGCGGGAGGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504525.1
ENST00000514004.5
ENST00000650454.1
CDS CCA 90 bp GCTGAGCATGCTCGGAGAGCCGGCCTGTCGCGGGAGGAAGCGGTGTaGGCCGCGGGCGGCGCACGCCGCGCAGTTGTTGTGATACAGCCC +
Preference number: 5 (lower is better)
Translates to: AEHARRAGLSREEAV*AAGGARRAVVVIQP
Trigger: GGGCTGTATCACAACAACTGCGCGGCGTGCGCCGCCCGCGGCCCACACCGCTTCCTCCCGCGACAGGCCGGCTCTCCGAGCATGCTCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616923.5
CDS GCA 90 bp CGGCCGCGCTGCCGCGGCGGCTCCCGCTTCTCTTTGCCGGTCTGGTaGACTGGCTTCTTCCTACTTGTGACCAAAACCTGCGCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: RPRCRGGSRFSLPVW*TGFFLLVTKTCAAA
Trigger: CGCGGCGGCGCAGGTTTTGGTCACAAGTAGGAAGAAGCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGCCGCCGCGGCAGCGCGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504525.1
ENST00000650454.1
CDS CCA 90 bp GCGCTGCCGCGGCGGCTCCCGCTTCTCTTTGCCGGTCTGGTGCACTaGCTTCTTCCTACTTGTGACCAAAACCTGCGCCGCCGCGGAGCA +
Preference number: 5 (lower is better)
Translates to: ALPRRLPLLFAGLVH*LLPTCDQNLRRRGA
Trigger: TGCTCCGCGGCGGCGCAGGTTTTGGTCACAAGTAGGAAGAAGCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGCCGCCGCGGCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504525.1
ENST00000650454.1
CDS-3UTR CAA 90 bp GCGGCTCAGAGGGGTCTTACATGGGTCCAGGCTCTGCACGGCCCTGTGCCTCTACACTTGAGAACGTCCTaGTGCCGGTCCTTGACGGCG +
Preference number: 5 (lower is better)
Translates to: AAQRGLTWVQALHGPVPLHLRTS*CRSLTA
Trigger: CGCCGTCAAGGACCGGCACAAGGACGTTCTCAAGTG...TAGAGGCACAGGGCCGTGCAGAGCCTGGACCCATGTAAGACCCCTCTGAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp GTGTGTGTGCACGCTGCAGCTGTTTCAGGTGAAGGAAGGCTGGGTTCTGGGTCTGGCTCCCGCTTCTCTTaGCCGGTCTGGTGCACTGGC +
Preference number: 5 (lower is better)
Translates to: VCVHAAAVSGEGRLGSGSGSRFS*PVWCTG
Trigger: GCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGCC...AGACCCAGAACCCAGCCTTCCTTCACCTGAAACAGCTGCAGCGTGCACACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS GCA 90 bp TCAGCAGCAACCTCCATGGCCTTGGGTAGGGGCGTTGTGGAGTCATaGTTCAAGGCTGGCAGGCCCCAGCTGTCAAGGAAAGGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: SAATSMALGRGVVES*FKAGRPQLSRKGRP
Trigger: TGGCCTACCTTTCCTTGACAGCTGGGGCCTGCCAGCCTTGAAGCATGACTCCACAACGCCCCTACCCAAGGCCATGGAGGTTGCTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS-3UTR CAA 90 bp GCCTCAGATATACTGCAGGCTTGGAATGTCACCTGGAGACAGCAATTGCCCATTGGCTCCCGCTTCTCTTaGCCGGTCTGGTGCACTGGC +
Preference number: 5 (lower is better)
Translates to: ASDILQAWNVTWRQQLPIGSRFS*PVWCTG
Trigger: GCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGCC...AATGGGCAATTGCTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CAA 90 bp AAGGTATCTGGCCTCAGATATACTGCAGGCTTGGAATGTCACCTGGAGACAGCATGGTCGGCATGGCGCTaGGTTTCCTCCCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: KVSGLRYTAGLECHLETAWSAWR*VSSQLS
Trigger: GCTGAGCTGGGAGGAAACCAAGCGCCATGCCGACCA...TGCTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCTGAGGCCAGATACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CAA 90 bp AAAAGCCAACTGCAGGCTTTTGTGTGGCCACCTGATGGGTTCCATGCTCTTCCACCTCCTTCCACTGGGTaGGGTTTGACCTCGGGCAGT +
Preference number: 5 (lower is better)
Translates to: KSQLQAFVWPPDGFHALPPPSTG*GLTSGS
Trigger: ACTGCCCGAGGTCAAACCCAACCCAGTGGAAGGAGG...TGGAAGAGCATGGAACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp ACTGAGAGCAGTCAGGCTGGCGGCTCAGAGGGGTCTTACATGGGTCCAGGCTCTCTGAAGCGAGGGTGCTaGTTTATTGCTTCATCTGGA +
Preference number: 5 (lower is better)
Translates to: TESSQAGGSEGSYMGPGSLKRGC*FIASSG
Trigger: TCCAGATGAAGCAATAAACAAGCACCCTCGCTTCAG...AGAGCCTGGACCCATGTAAGACCCCTCTGAGCCGCCAGCCTGACTGCTCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp ACAGAGCCAAAAGCCAACTGCAGGCTTTTGTGTGGCCACCTGATGGGTTCCATGGCCAACTGCAGGCTTTaGTGTGGCCACCTGATGGGT +
Preference number: 5 (lower is better)
Translates to: TEPKANCRLLCGHLMGSMANCRL*CGHLMG
Trigger: ACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGC...CATGGAACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGCTTTTGGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp AAGGTATCTGGCCTCAGATATACTGCAGGCTTGGAATGTCACCTGGAGACAGCAACCTCATCGCCCCACTaGAGAACGTCCTTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: KVSGLRYTAGLECHLETATSSPH*RTSLCR
Trigger: CCGGCACAAGGACGTTCTCAAGTGGGGCGATGAGGT...TGCTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCTGAGGCCAGATACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS TCA 90 bp GCTTCAAGGCTGGCAGGCCCCAGCTGTCAAGGAAAGGTAGGCCAGTaGGTTCCTCATCAGATAGTTGCTATGAAGGCTCATTTGGTGTCG +
Preference number: 5 (lower is better)
Translates to: ASRLAGPSCQGKVGQ*VPHQIVAMKAHLVS
Trigger: CGACACCAAATGAGCCTTCATAGCAACTATCTGATGAGGAACTCACTGGCCTACCTTTCCTTGACAGCTGGGGCCTGCCAGCCTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS GCA 90 bp CAGCTGTCAAGGAAAGGTAGGCCAGTGAGTTCCTCATCAGATAGTTaGTATGAAGGCTCATTTGGTGTCGGCAGCTCTGCCCTGGCACAG +
Preference number: 5 (lower is better)
Translates to: QLSRKGRPVSSSSDS*YEGSFGVGSSALAQ
Trigger: CTGTGCCAGGGCAGAGCTGCCGACACCAAATGAGCCTTCATAGCAACTATCTGATGAGGAACTCACTGGCCTACCTTTCCTTGACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS CCA 90 bp CAGATAGTTGCTATGAAGGCTCATTTGGTGTCGGCAGCTCTGCCCTaGCACAGCCAAACTGTCATCCTTCAGAGGAGTGTTCTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: QIVAMKAHLVSAALP*HSQTVILQRSVLPR
Trigger: CCTTGGCAGAACACTCCTCTGAAGGATGACAGTTTGGCTGTGCCAGGGCAGAGCTGCCGACACCAAATGAGCCTTCATAGCAACTATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS CCA 90 bp TTAAATATAAAACAGCTTGCTCATCAGCAGCAACCTCCATGGCCTTaGGTAGGGGCGTTGTGGAGTCATGCTTCAAGGCTGGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: LNIKQLAHQQQPPWP*VGALWSHASRLAGP
Trigger: GGGGCCTGCCAGCCTTGAAGCATGACTCCACAACGCCCCTACCCAAGGCCATGGAGGTTGCTGCTGATGAGCAAGCTGTTTTATATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS CCA 90 bp TTCAGGGCTGGTGCCCAGAAGAAAAACCCGAGTTGTAGAAAGACCTaGGGAGTAGGCTCAGAGAATGTCCTGAAGATGGGGAGATCACCC +
Preference number: 5 (lower is better)
Translates to: FRAGAQKKNPSCRKT*GVGSENVLKMGRSP
Trigger: GGGTGATCTCCCCATCTTCAGGACATTCTCTGAGCCTACTCCCCAGGTCTTTCTACAACTCGGGTTTTTCTTCTGGGCACCAGCCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CAA 90 bp CTACAGATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCCACTTGAGAACGTCCTaGTGCCGGTCCTTGACGGCG +
Preference number: 5 (lower is better)
Translates to: LQMQKSLPSDNQCLTHSLHLRTS*CRSLTA
Trigger: CGCCGTCAAGGACCGGCACAAGGACGTTCTCAAGTG...GAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCATCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CAA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTCACTTGAGAACGTCCTaGTGCCGGTCCTTGACGGCG +
Preference number: 5 (lower is better)
Translates to: GLAERHGTVASSSIMHFSHLRTS*CRSLTA
Trigger: CGCCGTCAAGGACCGGCACAAGGACGTTCTCAAGTG...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS TCA 90 bp ATCAGTCCAGGAAACACACCTTCCTACAAGAAGCAGGACACTTTATaGACTCCCTGCCGGGGGATGTGCACAGTGAGGGGTACTGTACAG +
Preference number: 5 (lower is better)
Translates to: ISPGNTPSYKKQDTL*TPCRGMCTVRGTVQ
Trigger: CTGTACAGTACCCCTCACTGTGCACATCCCCCGGCAGGGAGTTCATAAAGTGTCCTGCTTCTTGTAGGAAGGTGTGTTTCCTGGACTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515580.1
CDS CCA 90 bp GACTTACGAGGCCAAGAGAACAGACAGAAAAAGAGGCCCTCTAAGTaGCTAGGTCTTCAGGGCTGGTGCCCAGAAGAAAAACCCGAGTTG +
Preference number: 5 (lower is better)
Translates to: DLRGQENRQKKRPSK*LGLQGWCPEEKPEL
Trigger: CAACTCGGGTTTTTCTTCTGGGCACCAGCCCTGAAGACCTAGCCACTTAGAGGGCCTCTTTTTCTGTCTGTTCTCTTGGCCTCGTAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CAA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGTGGTCGGCATGGCGCTaGGTTTCCTCCCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERWSAWR*VSSQLS
Trigger: GCTGAGCTGGGAGGAAACCAAGCGCCATGCCGACCA...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTCCACTGGGTTGGGTTaGACCTCGGGCAGTGTGAAC +
Preference number: 5 (lower is better)
Translates to: GLAERHGTVASSSIMHFSSTGLG*TSGSVN
Trigger: GTTCACACTGCCCGAGGTCAAACCCAACCCAGTGGA...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTTCAGAGGGGAAAGCTaGGGGCAAGGTGACCAAGTG +
Preference number: 5 (lower is better)
Translates to: WSSYYTHGLAERHGTVASFRGES*GQGDQV
Trigger: CACTTGGTCACCTTGCCCCAAGCTTTCCCCTCTGAA...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS GCA 90 bp CTCCAAAGGGTAGGATGGTTTGGGTTTGTCCTTTCCCCCTTCTCTTaGAGAGTTTCAAGAACTTTCTCCCCAGACAGGACCAACCGGACT +
Preference number: 5 (lower is better)
Translates to: LQRVGWFGFVLSPFS*RVSRTFSPDRTNRT
Trigger: AGTCCGGTTGGTCCTGTCTGGGGAGAAAGTTCTTGAAACTCTGCAAGAGAAGGGGGAAAGGACAAACCCAAACCATCCTACCCTTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000505294.5
ENST00000513939.6
ENST00000514004.5
ENST00000514933.2
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS CCA 90 bp GTAGGGCTGTCCTGGTGTCCCTTCAATCATGTAACTCCCATACTCTaGTCTCCAAAGGGTAGGATGGTTTGGGTTTGTCCTTTCCCCCTT +
Preference number: 5 (lower is better)
Translates to: VGLSWCPFNHVTPIL*SPKGRMVWVCPFPL
Trigger: AAGGGGGAAAGGACAAACCCAAACCATCCTACCCTTTGGAGACCAGAGTATGGGAGTTACATGATTGAAGGGACACCAGGACAGCCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000505294.5
ENST00000513939.6
ENST00000514004.5
ENST00000514933.2
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAAGGCTCCCGCTTCTCTTaGCCGGTCTGGTGCACTGGC +
Preference number: 5 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKGSRFS*PVWCTG
Trigger: GCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGCC...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR CAA 90 bp TACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTTGGTCGGCATGGCGCTaGGTTTCCTCCCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: YLPKKALINFWLTGPENSWSAWR*VSSQLS
Trigger: GCTGAGCTGGGAGGAAACCAAGCGCCATGCCGACCA...ACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTACACTTGAGAACGTCCTaGTGCCGGTCCTTGACGGCG +
Preference number: 5 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVHLRTS*CRSLTA
Trigger: CGCCGTCAAGGACCGGCACAAGGACGTTCTCAAGTG...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp CAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGACCTCATCGCCCCACTaGAGAACGTCCTTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: QYSSIIWSSYYTHGLAERTSSPH*RTSLCR
Trigger: CCGGCACAAGGACGTTCTCAAGTGGGGCGATGAGGT...CCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp ACTGAGAGCAGTCAGGCTGGCGGCTCAGAGGGGTCTTACATGGGTCCAGGCTCTGGAGATGGTGTATTCTaGTCCTTAAATATTGGTACA +
Preference number: 5 (lower is better)
Translates to: TESSQAGGSEGSYMGPGSGDGVF*SLNIGT
Trigger: TGTACCAATATTTAAGGACAAGAATACACCATCTCC...AGAGCCTGGACCCATGTAAGACCCCTCTGAGCCGCCAGCCTGACTGCTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGAGCATGCCCAGTCTTaGCGTCCGCTAGCTCGCCGC +
Preference number: 5 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLREHAQS*RPLARR
Trigger: GCGGCGAGCTAGCGGACGCAAAGACTGGGCATGCTC...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650454.1
CDS-3UTR CAA 90 bp AAGGTATCTGGCCTCAGATATACTGCAGGCTTGGAATGTCACCTGGAGACAGCAACCAAACGTCATAAATaGGTCACCTCATCGCCCCAC +
Preference number: 5 (lower is better)
Translates to: KVSGLRYTAGLECHLETATKRHK*VTSSPH
Trigger: GTGGGGCGATGAGGTGACCAATTTATGACGTTTGGT...TGCTGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCTGAGGCCAGATACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CAA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACACCTCCTTCCACTGGGTaGGGTTTGACCTCGGGCAGT +
Preference number: 5 (lower is better)
Translates to: LPKKALINFWLTGPENSTPPSTG*GLTSGS
Trigger: ACTGCCCGAGGTCAAACCCAACCCAGTGGAAGGAGG...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS TCA 90 bp CGTCCGGCCAACTATTGTTTTCAAACTTCACTGGTGGCAGTATGGTaGAGAGCTTGGAAGGGGGAAAGACTAGAAAGACAGGGAAGCAGT +
Preference number: 5 (lower is better)
Translates to: RPANYCFQTSLVAVW*RAWKGERLERQGSS
Trigger: ACTGCTTCCCTGTCTTTCTAGTCTTTCCCCCTTCCAAGCTCTTCACCATACTGCCACCAGTGAAGTTTGAAAACAATAGTTGGCCGGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS GCA 90 bp CTTCTTCCTCTCCAAGCAGAAACCTGGATTAAATATAAAACAGCTTaGTCATCAGCAGCAACCTCCATGGCCTTGGGTAGGGGCGTTGTG +
Preference number: 5 (lower is better)
Translates to: LLPLQAETWIKYKTA*SSAATSMALGRGVV
Trigger: CACAACGCCCCTACCCAAGGCCATGGAGGTTGCTGCTGATGAGCAAGCTGTTTTATATTTAATCCAGGTTTCTGCTTGGAGAGGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS GCA 90 bp AGACAAGCAGAAGCCCAGAGAAGTTATGAACCAACTACACAAACATaGTCTTCCCTGACCCAGGCCCTTCCTCAGATCATGTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: RQAEAQRSYEPTTQT*SSLTQALPQIMSFP
Trigger: TGGGAATGACATGATCTGAGGAAGGGCCTGGGTCAGGGAAGAGCATGTTTGTGTAGTTGGTTCATAACTTCTCTGGGCTTCTGCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510837.5
CDS CCA 90 bp CTCAACTGTATTGAACTCGGACATTGTTCCTCCGTAGGGCTGTCCTaGTGTCCCTTCAATCATGTAACTCCCATACTCTGGTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: LNCIELGHCSSVGLS*CPFNHVTPILWSPK
Trigger: CTTTGGAGACCAGAGTATGGGAGTTACATGATTGAAGGGACACCAGGACAGCCCTACGGAGGAACAATGTCCGAGTTCAATACAGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000505294.5
ENST00000513939.6
ENST00000514004.5
ENST00000514933.2
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp TTTTGTACCGCTAGACAGCTTTGCACAAATCCCTTGGATCACAAAATCATTGGAACCTCATCGCCCCACTaGAGAACGTCCTTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: FCTARQLCTNPLDHKIIGTSSPH*RTSLCR
Trigger: CCGGCACAAGGACGTTCTCAAGTGGGGCGATGAGGT...TCCAATGATTTTGTGATCCAAGGGATTTGTGCAAAGCTGTCTAGCGGTACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAAACCTCATCGCCCCACTaGAGAACGTCCTTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKTSSPH*RTSLCR
Trigger: CCGGCACAAGGACGTTCTCAAGTGGGGCGATGAGGT...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp AAAAGCCAACTGCAGGCTTTTGTGTGGCCACCTGATGGGTTCCATGCTCTTCCACCTTTCCCCCTTCTCTaGCAGAGTTTCAAGAACTTT +
Preference number: 5 (lower is better)
Translates to: KSQLQAFVWPPDGFHALPPFPLL*QSFKNF
Trigger: AAAGTTCTTGAAACTCTGCAAGAGAAGGGGGAAAGG...TGGAAGAGCATGGAACCCATCAGGTGGCCACACAAAAGCCTGCAGTTGGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp AACAGAGACAGGCTCCTGTATACTTTACTCAGGGGCAAGACAAACACAAGCTGCCGGCGTTTTCGCATGTaGGCCTCAACTGTATTGAAC +
Preference number: 5 (lower is better)
Translates to: NRDRLLYTLLRGKTNTSCRRFRM*ASTVLN
Trigger: GTTCAATACAGTTGAGGCCAACATGCGAAAACGCCG...GCAGCTTGTGTTTGTCTTGCCCCTGAGTAAAGTATACAGGAGCCTGTCTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp TACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATTCCACTGGGTTGGGTTaGACCTCGGGCAGTGTGAAC +
Preference number: 5 (lower is better)
Translates to: YSSIIWSSYYTHGLAERHSTGLG*TSGSVN
Trigger: GTTCACACTGCCCGAGGTCAAACCCAACCCAGTGGA...ATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACCCTCCTTCCACTGGGTaGGGTTTGACCTCGGGCAGT +
Preference number: 5 (lower is better)
Translates to: IYLPKKALINFWLTGPENPPSTG*GLTSGS
Trigger: ACTGCCCGAGGTCAAACCCAACCCAGTGGAAGGAGG...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGACCTCATGATCTGCTaGCCTCGGCCTCCCAAAATG +
Preference number: 5 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTDLMIC*PRPPKM
Trigger: CATTTTGGGAGGCCGAGGCAAGCAGATCATGAGGTC...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CAA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCTTCTACTGGCTTGTaGCCTTCCTATCCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: WSSYYTHGLAERHGTVASSSTGL*PSYPFS
Trigger: ACTGAAGGGATAGGAAGGCAACAAGCCAGTAGAAGA...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CAA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGTTCAGAGGGGAAAGCTaGGGGCAAGGTGACCAAGTG +
Preference number: 5 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMFRGES*GQGDQV
Trigger: CACTTGGTCACCTTGCCCCAAGCTTTCCCCTCTGAA...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTTTCAGAGGGGAAAGCTaGGGGCAAGGTGACCAAGTG +
Preference number: 5 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTFRGES*GQGDQV
Trigger: CACTTGGTCACCTTGCCCCAAGCTTTCCCCTCTGAA...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp CTACAGATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCAGATATACTGCAGGCTaGGAATGTCACCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: LQMQKSLPSDNQCLTHSLRYTAG*ECHLET
Trigger: TGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCT...GAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCATCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CAA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGCCTCCTTCCACTGGGTaGGGTTTGACCTCGGGCAGT +
Preference number: 5 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMPPSTG*GLTSGS
Trigger: ACTGCCCGAGGTCAAACCCAACCCAGTGGAAGGAGG...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS CCA 90 bp GGTGTCCACATCCACTTCCATGTTTTCAAGGTAAGAGTTCAGAATTaGGATCAGTCCAGGAAACACACCTTCCTACAAGAAGCAGGACAC +
Preference number: 5 (lower is better)
Translates to: GVHIHFHVFKVRVQN*DQSRKHTFLQEAGH
Trigger: GTGTCCTGCTTCTTGTAGGAAGGTGTGTTTCCTGGACTGATCCCAATTCTGAACTCTTACCTTGAAAACATGGAAGTGGATGTGGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515580.1
CDS-3UTR CAA 90 bp AAAATAAATATTAGCTTAGAGTCAGACCTAGAAGGGGACTTAATATCAGCCCTTTGGTCGGCATGGCGCTaGGTTTCCTCCCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: KINISLESDLEGDLISALWSAWR*VSSQLS
Trigger: GCTGAGCTGGGAGGAAACCAAGCGCCATGCCGACCA...AAGGGCTGATATTAAGTCCCCTTCTAGGTCTGACTCTAAGCTAATATTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCCCTTTCCCCCTTCTCTaGCAGAGTTTCAAGAACTTT +
Preference number: 5 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTPFPLL*QSFKNF
Trigger: AAAGTTCTTGAAACTCTGCAAGAGAAGGGGGAAAGG...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp GGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTCCTTTCCCCCTTCTCTaGCAGAGTTTCAAGAACTTT +
Preference number: 5 (lower is better)
Translates to: GLAERHGTVASSSIMHFSPFPLL*QSFKNF
Trigger: AAAGTTCTTGAAACTCTGCAAGAGAAGGGGGAAAGG...AGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCTCTCAGCCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGCGGCGTTTTCGCATGTaGGCCTCAACTGTATTGAAC +
Preference number: 5 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMRRFRM*ASTVLN
Trigger: GTTCAATACAGTTGAGGCCAACATGCGAAAACGCCG...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCGGTAAGAGTTCAGAATaGGGATCAGTCCAGGAAACA +
Preference number: 5 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTGKSSE*GSVQET
Trigger: TGTTTCCTGGACTGATCCCAATTCTGAACTCTTACC...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS TCA 90 bp AAAACTTATATTCATGTGGAACGTCTGCATTTCAAAGCACCTCTGTaGCTGAGCCTTGCAACAGATATACAGTGTTGGGAGGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: KTYIHVERLHFKAPL*LSLATDIQCWEGRW
Trigger: CCACCTGCCCTCCCAACACTGTATATCTGTTGCAAGGCTCAGTCACAGAGGTGCTTTGAAATGCAGACGTTCCACATGAATATAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515580.1
CDS GCA 90 bp AATAAAGAGATGAGCAACATGCTGGGCCAGGAGATGATCAATGCCTaGAAAAAGAGATCACATGGGAACTCACTGCAAAGCGAGAGATAC +
Preference number: 5 (lower is better)
Translates to: NKEMSNMLGQEMINA*KKRSHGNSLQSERY
Trigger: GTATCTCTCGCTTTGCAGTGAGTTCCCATGTGATCTCTTTTTGCAGGCATTGATCATCTCCTGGCCCAGCATGTTGCTCATCTCTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504353.1
CDS CCA 90 bp GGTGTCCACATCCACTTCCATGTTTTCAAGGTAAGAGTTCAGAATTaGGATCAGTCCAGGAAACACACCTTCCTTCCCATTGATGATGGT +
Preference number: 5 (lower is better)
Translates to: GVHIHFHVFKVRVQN*DQSRKHTFLPIDDG
Trigger: ACCATCATCAATGGGAAGGAAGGTGTGTTTCCTGGACTGATCCCAATTCTGAACTCTTACCTTGAAAACATGGAAGTGGATGTGGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000509541.5
ENST00000510837.5
ENST00000513939.6
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTAGATATACTGCAGGCTaGGAATGTCACCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTRYTAG*ECHLET
Trigger: TGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCT...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACACGGCGTTTTCGCATGTaGGCCTCAACTGTATTGAAC +
Preference number: 5 (lower is better)
Translates to: LPKKALINFWLTGPENSTRRFRM*ASTVLN
Trigger: GTTCAATACAGTTGAGGCCAACATGCGAAAACGCCG...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp TACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATCGGCGTTTTCGCATGTaGGCCTCAACTGTATTGAAC +
Preference number: 5 (lower is better)
Translates to: YSSIIWSSYYTHGLAERHRRFRM*ASTVLN
Trigger: GTTCAATACAGTTGAGGCCAACATGCGAAAACGCCG...ATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTTCCACTGGGTTGGGTTaGACCTCGGGCAGTGTGAAC +
Preference number: 5 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSSTGLG*TSGSVN
Trigger: GTTCACACTGCCCGAGGTCAAACCCAACCCAGTGGA...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTCTGAAGCGAGGGTGCTaGTTTATTGCTTCATCTGGA +
Preference number: 5 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTLKRGC*FIASSG
Trigger: TCCAGATGAAGCAATAAACAAGCACCCTCGCTTCAG...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGCTGAAGCGAGGGTGCTaGTTTATTGCTTCATCTGGA +
Preference number: 5 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMLKRGC*FIASSG
Trigger: TCCAGATGAAGCAATAAACAAGCACCCTCGCTTCAG...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTACACCTTCCTTCCCATaGATGATGGTGTCTATGCTC +
Preference number: 5 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTTPSFP*MMVSML
Trigger: GAGCATAGACACCATCATCAATGGGAAGGAAGGTGT...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAACACCTTCCTTCCCATaGATGATGGTGTCTATGCTC +
Preference number: 5 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVTPSFP*MMVSML
Trigger: GAGCATAGACACCATCATCAATGGGAAGGAAGGTGT...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCAGTTATGACACTGTCTaGCTTGTAGTCAGGATGGTT +
Preference number: 5 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTSYDTV*LVVRMV
Trigger: AACCATCCTGACTACAAGCAAGACAGTGTCATAACT...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGCGTCCGGCCAACTATaGTTTTCAAACTTCACTGGT +
Preference number: 5 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMASGQL*FSNFTG
Trigger: ACCAGTGAAGTTTGAAAACAATAGTTGGCCGGACGC...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CAA 90 bp ACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGTTCTCTTCTACTGGCTaGTTGCCTTCCTATCCCTTC +
Preference number: 5 (lower is better)
Translates to: TVLSFGLHIIHTGWLRGMFSSTG*LPSYPF
Trigger: GAAGGGATAGGAAGGCAACAAGCCAGTAGAAGAGAA...CATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CAA 90 bp TGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTAGCCAGTAACCCAAGATTACCCTaGAAGCACTTTCAATGGATT +
Preference number: 5 (lower is better)
Translates to: WSSYYTHGLAERHGTVASNPRLP*KHFQWI
Trigger: AATCCATTGAAAGTGCTTCAAGGGTAATCTTGGGTT...ACTGGCTACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS TCA 90 bp AGGTTTTGGCTTGGGTGTTCAGAGGTTAGAGATAAAGAGGTGTCATaGCATGATGGACTTACGAGGCCAAGAGAACAGACAGAAAAAGAG +
Preference number: 5 (lower is better)
Translates to: RFWLGCSEVRDKEVS*HDGLTRPREQTEKE
Trigger: CTCTTTTTCTGTCTGTTCTCTTGGCCTCGTAAGTCCATCATGTCATGACACCTCTTTATCTCTAACCTCTGAACACCCAAGCCAAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS GCA 90 bp CTGTTTAAGAATTGCAAAGTTATTAACACCAAGGAATCATTAGCATaGTCCCCAAGCAGTGAAGTCAGAGAAGGAAGGTGCTGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LFKNCKVINTKESLA*SPSSEVREGRCWAE
Trigger: CTCTGCCCAGCACCTTCCTTCTCTGACTTCACTGCTTGGGGAGCATGCTAATGATTCCTTGGTGTTAATAACTTTGCAATTCTTAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CAA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCACTGCATTGCCACCTTaGCAAATATCTTTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTTALPP*QISFLK
Trigger: TTTCAGGAAAGATATTTGCAAAGGTGGCAATGCAGT...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTTTGGCCTCAACTGTATaGAACTCGGACATTGTTCCT +
Preference number: 5 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTLASTV*NSDIVP
Trigger: AGGAACAATGTCCGAGTTCAATACAGTTGAGGCCAA...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp AAAATAAATATTAGCTTAGAGTCAGACCTAGAAGGGGACTTAATATCAGCCCTTTCCACTGGGTTGGGTTaGACCTCGGGCAGTGTGAAC +
Preference number: 5 (lower is better)
Translates to: KINISLESDLEGDLISALSTGLG*TSGSVN
Trigger: GTTCACACTGCCCGAGGTCAAACCCAACCCAGTGGA...AAGGGCTGATATTAAGTCCCCTTCTAGGTCTGACTCTAAGCTAATATTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp TACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTCTGAAGCGAGGGTGCTaGTTTATTGCTTCATCTGGA +
Preference number: 5 (lower is better)
Translates to: YLPKKALINFWLTGPENSLKRGC*FIASSG
Trigger: TCCAGATGAAGCAATAAACAAGCACCCTCGCTTCAG...ACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp AACAGAGACAGGCTCCTGTATACTTTACTCAGGGGCAAGACAAACACAAGCTGCTGGATCACAAAATCATaGGAATACTTCCATCAGAGC +
Preference number: 5 (lower is better)
Translates to: NRDRLLYTLLRGKTNTSCWITKS*EYFHQS
Trigger: GCTCTGATGGAAGTATTCCAATGATTTTGTGATCCA...GCAGCTTGTGTTTGTCTTGCCCCTGAGTAAAGTATACAGGAGCCTGTCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp CTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTACAACACCTTCCTTCCCATaGATGATGGTGTCTATGCTC +
Preference number: 5 (lower is better)
Translates to: LPKKALINFWLTGPENSTTPSFP*MMVSML
Trigger: GAGCATAGACACCATCATCAATGGGAAGGAAGGTGT...TGTACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAAGGCTTAGGTTTTGGCTaGGGTGTTCAGAGGTTAGAG +
Preference number: 5 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKGLGFG*GVQRLE
Trigger: CTCTAACCTCTGAACACCCAAGCCAAAACCTAAGCC...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CAA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCAACCCAAGATTACCCTaGAAGCACTTTCAATGGATT +
Preference number: 5 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTNPRLP*KHFQWI
Trigger: AATCCATTGAAAGTGCTTCAAGGGTAATCTTGGGTT...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS GCA 90 bp CATACGATGATGTTTAGCAAAGCATTTTCTCTTCTACTGGCTTGTTaGCTTCCTATCCCTTCAGTCAGTGAGGGATGCAAAAGGGATTTG +
Preference number: 5 (lower is better)
Translates to: HTMMFSKAFSLLLAC*LPIPSVSEGCKRDL
Trigger: CAAATCCCTTTTGCATCCCTCACTGACTGAAGGGATAGGAAGGCAACAAGCCAGTAGAAGAGAAAATGCTTTGCTAAACATCATCGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS GCA 90 bp GGCCTCAGATATACTGCAGGCTTGGAATGTCACCTGTTTAAGAATTaGAAAGTTATTAACACCAAGGAATCATTAGCATGCTCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: GLRYTAGLECHLFKN*KVINTKESLACSPS
Trigger: GCTTGGGGAGCATGCTAATGATTCCTTGGTGTTAATAACTTTGCAATTCTTAAACAGGTGACATTCCAAGCCTGCAGTATATCTGAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CAA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACCCATCCACCACTGCATaGCCACCTTTGCAAATATCT +
Preference number: 5 (lower is better)
Translates to: IYLPKKALINFWLTGPENPSTTA*PPLQIS
Trigger: AGATATTTGCAAAGGTGGCAATGCAGTGGTGGATGG...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp CATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGACCGGAGATGGTGTATTCTaGTCCTTAAATATTGGTACA +
Preference number: 5 (lower is better)
Translates to: HQSSMGIYSEGKAWGKVTGDGVF*SLNIGT
Trigger: TGTACCAATATTTAAGGACAAGAATACACCATCTCC...GGTCACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGAGATATACTGCAGGCTaGGAATGTCACCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGRYTAG*ECHLET
Trigger: TGTCTCCAGGTGACATTCCAAGCCTGCAGTATATCT...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp TACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATTTGGCCTCAACTGTATaGAACTCGGACATTGTTCCT +
Preference number: 5 (lower is better)
Translates to: YSSIIWSSYYTHGLAERHLASTV*NSDIVP
Trigger: AGGAACAATGTCCGAGTTCAATACAGTTGAGGCCAA...ATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACACACCTTCCTTCCCATaGATGATGGTGTCTATGCTC +
Preference number: 5 (lower is better)
Translates to: IYLPKKALINFWLTGPENTPSFP*MMVSML
Trigger: GAGCATAGACACCATCATCAATGGGAAGGAAGGTGT...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTAGTTATGACACTGTCTaGCTTGTAGTCAGGATGGTT +
Preference number: 5 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTSYDTV*LVVRMV
Trigger: AACCATCCTGACTACAAGCAAGACAGTGTCATAACT...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp AGCCATCAGAGTTCAATGGGTATTTATTCAGAGGGGAAAGCTTGGGGCAAGGTGATTTACACAAGCAAATaGCAAACGAAAACCAGGCAT +
Preference number: 5 (lower is better)
Translates to: SHQSSMGIYSEGKAWGKVIYTSK*QTKTRH
Trigger: ATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAAT...CACCTTGCCCCAAGCTTTCCCCTCTGAATAAATACCCATTGAACTCTGATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS TCA 90 bp GAAGCATACCCAAAGATCACACTTGCAAACAGCAGAGCCAGTATTTaGTTCCAGGTTAGTTTGCCTTCAAAGTCCAAGTTCATTCCACTT +
Preference number: 5 (lower is better)
Translates to: EAYPKITLANSRASI*FQVSLPSKSKFIPL
Trigger: AAGTGGAATGAACTTGGACTTTGAAGGCAAACTAACCTGGAATCAAATACTGGCTCTGCTGTTTGCAAGTGTGATCTTTGGGTATGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS GCA 90 bp ACTTTGCCTCTCTGTATATTTGAAACTATACCTGGAGACAGCAATTaGCCATTCCAAATCCCATGGCATCCATGTAAATATGATCCGGCT +
Preference number: 5 (lower is better)
Translates to: TLPLCIFETIPGDSN*PFQIPWHPCKYDPA
Trigger: AGCCGGATCATATTTACATGGATGCCATGGGATTTGGAATGGGCAATTGCTGTCTCCAGGTATAGTTTCAAATATACAGAGAGGCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp ATGCAGAAATCACTCCCCAGCGACAATCAATGTCTGACACATAGCCTCGGTAAAGGAGATGGTGTATTCTaGTCCTTAAATATTGGTACA +
Preference number: 5 (lower is better)
Translates to: MQKSLPSDNQCLTHSLGKGDGVF*SLNIGT
Trigger: TGTACCAATATTTAAGGACAAGAATACACCATCTCC...TTTACCGAGGCTATGTGTCAGACATTGATTGTCGCTGGGGAGTGATTTCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504525.1
CDS-3UTR CAA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACCCTTTCCCCCTTCTCTaGCAGAGTTTCAAGAACTTT +
Preference number: 5 (lower is better)
Translates to: IYLPKKALINFWLTGPENPFPLL*QSFKNF
Trigger: AAAGTTCTTGAAACTCTGCAAGAGAAGGGGGAAAGG...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGATTGGCCTCAACTGTATaGAACTCGGACATTGTTCCT +
Preference number: 5 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRLASTV*NSDIVP
Trigger: AGGAACAATGTCCGAGTTCAATACAGTTGAGGCCAA...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp TACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACAGTGCTGAAGCAGCTTTATaGCAATCTCTTCAAGTTAGC +
Preference number: 5 (lower is better)
Translates to: YLPKKALINFWLTGPENSAEAAL*QSLQVS
Trigger: GCTAACTTGAAGAGATTGCAATAAAGCTGCTTCAGC...ACTGTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp TACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGCTGAAGCAGCTTTATaGCAATCTCTTCAAGTTAGC +
Preference number: 5 (lower is better)
Translates to: YSSIIWSSYYTHGLAERHAEAAL*QSLQVS
Trigger: GCTAACTTGAAGAGATTGCAATAAAGCTGCTTCAGC...ATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGGGTAAGAGTTCAGAATaGGGATCAGTCCAGGAAACA +
Preference number: 5 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMGKSSE*GSVQET
Trigger: TGTTTCCTGGACTGATCCCAATTCTGAACTCTTACC...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp AACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAAGTTATGACACTGTCTaGCTTGTAGTCAGGATGGTT +
Preference number: 5 (lower is better)
Translates to: NSTVLSFGLHIIHTGWLRSYDTV*LVVRMV
Trigger: AACCATCCTGACTACAAGCAAGACAGTGTCATAACT...TCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp ATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTGTACAAAGAAAAGTTCCTTaGATAACAGCCATCAGAGTT +
Preference number: 5 (lower is better)
Translates to: IIWSSYYTHGLAERHGTVQRKVP*ITAIRV
Trigger: AACTCTGATGGCTGTTATCAAAGGAACTTTTCTTTG...TACAGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTCAAAGAAAAGTTCCTTaGATAACAGCCATCAGAGTT +
Preference number: 5 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTQRKVP*ITAIRV
Trigger: AACTCTGATGGCTGTTATCAAAGGAACTTTTCTTTG...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp TCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATGGTACTATTTACACAAGCAAATaGCAAACGAAAACCAGGCAT +
Preference number: 5 (lower is better)
Translates to: SIIWSSYYTHGLAERHGTIYTSK*QTKTRH
Trigger: ATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAAT...AGTACCATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS TCA 90 bp CTGCTCAAATGCTTCCCAGTGGGAGGAACAGGCTTTTTATTTATGTaGGGACTGTATCACTCAATCATGGATTGGTATGTGATTTTTCAA +
Preference number: 5 (lower is better)
Translates to: LLKCFPVGGTGFLFM*GLYHSIMDWYVIFQ
Trigger: TTGAAAAATCACATACCAATCCATGATTGAGTGATACAGTCCTCACATAAATAAAAAGCCTGTTCCTCCCACTGGGAAGCATTTGAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515580.1
CDS-3UTR CAA 90 bp TGGCCCAGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGACTGCATTGCCACCTTaGCAAATATCTTTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: WPRKQYSSIIWSSYYTHGTALPP*QISFLK
Trigger: TTTCAGGAAAGATATTTGCAAAGGTGGCAATGCAGT...CCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCTGGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp ACCGTATATACCTTTGTGGTGAACAACAGAGTCTGTAGAACTATTAGTCATAGATTGGCCTCAACTGTATaGAACTCGGACATTGTTCCT +
Preference number: 5 (lower is better)
Translates to: TVYTFVVNNRVCRTISHRLASTV*NSDIVP
Trigger: AGGAACAATGTCCGAGTTCAATACAGTTGAGGCCAA...TCTATGACTAATAGTTCTACAGACTCTGTTGTTCACCACAAAGGTATATACGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp GCTAGACAGCTTTGCACAAATCCCTTGGATCACAAAATCATTGGAATACTTCCATGCCTCTCTGTATATTaGAAACTATACCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: ARQLCTNPLDHKIIGILPCLSVY*KLYLET
Trigger: TGTCTCCAGGTATAGTTTCAAATATACAGAGAGGCA...TGGAAGTATTCCAATGATTTTGTGATCCAAGGGATTTGTGCAAAGCTGTCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514004.5
CDS-3UTR CAA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTGGTAAGAGTTCAGAATaGGGATCAGTCCAGGAAACA +
Preference number: 5 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSGKSSE*GSVQET
Trigger: TGTTTCCTGGACTGATCCCAATTCTGAACTCTTACC...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTAGTTATGACACTGTCTaGCTTGTAGTCAGGATGGTT +
Preference number: 5 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLASYDTV*LVVRMV
Trigger: AACCATCCTGACTACAAGCAAGACAGTGTCATAACT...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp TACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGAGAGGCATCAAAGAAAAGTTCCTTaGATAACAGCCATCAGAGTT +
Preference number: 5 (lower is better)
Translates to: YSSIIWSSYYTHGLAERHQRKVP*ITAIRV
Trigger: AACTCTGATGGCTGTTATCAAAGGAACTTTTCTTTG...ATGCCTCTCAGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTGCTGAAGCAGCTTTATaGCAATCTCTTCAAGTTAGC +
Preference number: 5 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLAAEAAL*QSLQVS
Trigger: GCTAACTTGAAGAGATTGCAATAAAGCTGCTTCAGC...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGACTGCATTGCCACCTTaGCAAATATCTTTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMTALPP*QISFLK
Trigger: TTTCAGGAAAGATATTTGCAAAGGTGGCAATGCAGT...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp AGAAAACAGTACAGTTCTATCATTTGGTCTTCATATTATACACACGGGCTGGCTACTGCATTGCCACCTTaGCAAATATCTTTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: RKQYSSIIWSSYYTHGLATALPP*QISFLK
Trigger: TTTCAGGAAAGATATTTGCAAAGGTGGCAATGCAGT...AGCCAGCCCGTGTGTATAATATGAAGACCAAATGATAGAACTGTACTGTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp ATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAACGGAGATGGTGTATTCTaGTCCTTAAATATTGGTACA +
Preference number: 5 (lower is better)
Translates to: IYLPKKALINFWLTGPENGDGVF*SLNIGT
Trigger: TGTACCAATATTTAAGGACAAGAATACACCATCTCC...GTTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS-3UTR CAA 90 bp GATTTACCTACCAAAGAAAGCCTTAATCAATTTCTGGCTCACTGGCCCAGAAAAGGATGCAAAAGGGATTaGGACATGTTAACTATTGTT +
Preference number: 5 (lower is better)
Translates to: DLPTKESLNQFLAHWPRKGCKRD*DMLTIV
Trigger: AACAATAGTTAACATGTCCAAATCCCTTTTGCATCC...TTTTCTGGGCCAGTGAGCCAGAAATTGATTAAGGCTTTCTTTGGTAGGTAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CAA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTAGATATACTGCAGGCTaGGAATGTCACCTGTTTAAG +
Preference number: 5 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSRYTAG*ECHLFK
Trigger: CTTAAACAGGTGACATTCCAAGCCTGCAGTATATCT...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS-3UTR CAA 90 bp AGGCATGGTACTGTAGCCAGTTCGTCAATAATGCATTTTTCTTTCTGTAGAATGAACCCAAGATTACCCTaGAAGCACTTTCAATGGATT +
Preference number: 5 (lower is better)
Translates to: RHGTVASSSIMHFSFCRMNPRLP*KHFQWI
Trigger: AATCCATTGAAAGTGCTTCAAGGGTAATCTTGGGTT...CATTCTACAGAAAGAAAAATGCATTATTGACGAACTGGCTACAGTACCATGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000509541.5
ENST00000616923.5
ENST00000650454.1
CDS-3UTR CAA 90 bp CCTTTTTACAACCTGATTTACACAAGCAAATTGCAAACGAAAACCAGGCATTCTGGAGATGGTGTATTCTaGTCCTTAAATATTGGTACA +
Preference number: 5 (lower is better)
Translates to: PFYNLIYTSKLQTKTRHSGDGVF*SLNIGT
Trigger: TGTACCAATATTTAAGGACAAGAATACACCATCTCC...AGAATGCCTGGTTTTCGTTTGCAATTTGCTTGTGTAAATCAGGTTGTAAAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616923.5
ENST00000650454.1
CDS GCA 72 bp GCTCCGATGCGGCGGCGGCGGACCCCACGGCCGCGCTaGCGCGGCGGCTCCCGCTTCTCTTTGCCGGTCTGG +
Preference number: 6 (lower is better)
Translates to: APMRRRRTPRPR*RGGSRFSLPVW
Trigger: CCAGACCGGCAAAGAGAAGCGGGAGCCGCCGCGGCAGCGCGGCCGTGGGGTCCGCCGCCGCCGCATCGGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504525.1
ENST00000514004.5
ENST00000650454.1
CDS CCA 72 bp CCCGGCGGCGGCCCCTGGCGCCCAGGTGACAGACCCTaGGTCCGACGCACCGCGCGGAGGCGAAGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: PGGGPWRPGDRP*VRRTARRRRQK
Trigger: CTTCTGCCTTCGCCTCCGCGCGGTGCGTCGGACCCAGGGTCTGTCACCTGGGCGCCAGGGGCCGCCGCCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504525.1
ENST00000514004.5
ENST00000650454.1
CDS CCA 72 bp AACTGGAGGATCCCGTGCCGCCGCACGTGGTCGGCATaGCGCTTGGTTTCCTCCCAGCTCAGCGGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: NWRIPCRRTWSA*RLVSSQLSGEP
Trigger: GGGCTCGCCGCTGAGCTGGGAGGAAACCAAGCGCCATGCCGACCACGTGCGGCGGCACGGGATCCTCCAGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000504525.1
ENST00000513939.6
ENST00000514004.5
ENST00000643939.1
ENST00000650454.1
CDS CAA 90 bp CGGCGGACCCCACGGCCGCGCTGCCGCGGCGGCTCCCGCTTCTCTTaGCCGGTCTGGTGCACTGGCTTCTTCCTACTTGTGACCAAAACC +
Preference number: 6 (lower is better)
Translates to: RRTPRPRCRGGSRFS*PVWCTGFFLLVTKT
Trigger: GGTTTTGGTCACAAGTAGGAAGAAGCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGCCGCCGCGGCAGCGCGGCCGTGGGGTCCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504525.1
ENST00000650454.1
CDS CAA 72 bp CCACGGCCGCGCTGCCGCGGCGGCTCCCGCTTCTCTTaGCCGGTCTGGTGCACTGGCTTCTTCCTACTTGTG +
Preference number: 6 (lower is better)
Translates to: PRPRCRGGSRFS*PVWCTGFFLLV
Trigger: CACAAGTAGGAAGAAGCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGCCGCCGCGGCAGCGCGGCCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504525.1
ENST00000650454.1
CDS CCA 72 bp ATGTGCAGGAACTGGAGGATCCCGTGCCGCCGCACGTaGTCGGCATGGCGCTTGGTTTCCTCCCAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: MCRNWRIPCRRT*SAWRLVSSQLS
Trigger: GCTGAGCTGGGAGGAAACCAAGCGCCATGCCGACCACGTGCGGCGGCACGGGATCCTCCAGTTCCTGCACAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000504525.1
ENST00000513939.6
ENST00000514004.5
ENST00000643939.1
ENST00000650454.1
CDS CCA 72 bp CGGCGGCTCCCGCTTCTCTTTGCCGGTCTGGTGCACTaGCTTCTTCCTACTTGTGACCAAAACCTGCGCCGC +
Preference number: 6 (lower is better)
Translates to: RRLPLLFAGLVH*LLPTCDQNLRR
Trigger: GCGGCGCAGGTTTTGGTCACAAGTAGGAAGAAGCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGCCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504525.1
ENST00000650454.1
CDS CCA 72 bp CGCTGCCGCGGCGGCTCCCGCTTCTCTTTGCCGGTCTaGTGCACTGGCTTCTTCCTACTTGTGACCAAAACC +
Preference number: 6 (lower is better)
Translates to: RCRGGSRFSLPV*CTGFFLLVTKT
Trigger: GGTTTTGGTCACAAGTAGGAAGAAGCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGCCGCCGCGGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504525.1
ENST00000650454.1
CDS CAA 72 bp CATCAGCAGCAACCTCCATGGCCTTGGGTAGGGGCGTaGTGGAGTCATGCTTCAAGGCTGGCAGGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: HQQQPPWPWVGA*WSHASRLAGPS
Trigger: GCTGGGGCCTGCCAGCCTTGAAGCATGACTCCACAACGCCCCTACCCAAGGCCATGGAGGTTGCTGCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS GCA 72 bp TGCCGCGGCGGCTCCCGCTTCTCTTTGCCGGTCTGGTaGACTGGCTTCTTCCTACTTGTGACCAAAACCTGC +
Preference number: 6 (lower is better)
Translates to: CRGGSRFSLPVW*TGFFLLVTKTC
Trigger: GCAGGTTTTGGTCACAAGTAGGAAGAAGCCAGTGCACCAGACCGGCAAAGAGAAGCGGGAGCCGCCGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504525.1
ENST00000650454.1
CDS CAA 72 bp AGGGACTTGGAAGCTCCTCCTTCCACTGGGTTGGGTTaGACCTCGGGCAGTGTGAACCCAGGACAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: RDLEAPPSTGLG*TSGSVNPGQPG
Trigger: CCCAGGCTGTCCTGGGTTCACACTGCCCGAGGTCAAACCCAACCCAGTGGAAGGAGGAGCTTCCAAGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505294.5
CDS CAA 90 bp CAGCTTGCTCATCAGCAGCAACCTCCATGGCCTTGGGTAGGGGCGTaGTGGAGTCATGCTTCAAGGCTGGCAGGCCCCAGCTGTCAAGGA +
Preference number: 6 (lower is better)
Translates to: QLAHQQQPPWPWVGA*WSHASRLAGPSCQG
Trigger: TCCTTGACAGCTGGGGCCTGCCAGCCTTGAAGCATGACTCCACAACGCCCCTACCCAAGGCCATGGAGGTTGCTGCTGATGAGCAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS TCA 72 bp ACACTTTATGAACTCCCTGCCGGGGGATGTGCACAGTaGGGGGTACTGTACAGGGCCACCCTCCTACCTTCC +
Preference number: 6 (lower is better)
Translates to: TLYELPAGGCAQ*GVLYRATLLPS
Trigger: GGAAGGTAGGAGGGTGGCCCTGTACAGTACCCCTCACTGTGCACATCCCCCGGCAGGGAGTTCATAAAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515580.1
CDS GCA 72 bp GATGATGGTGTCTATGCTCATGAGGGTGTACTCCTCTaGAGCGAGCTCCGTGCTGTTCTGGGCCTTGCCACA +
Preference number: 6 (lower is better)
Translates to: DDGVYAHEGVLL*SELRAVLGLAT
Trigger: TGTGGCAAGGCCCAGAACAGCACGGAGCTCGCTGCAGAGGAGTACACCCTCATGAGCATAGACACCATCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504353.1
ENST00000509541.5
ENST00000510837.5
ENST00000513939.6
ENST00000515580.1
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS CAA 72 bp AGGGACTTGGAAGCTCCTCCTTCCACTGGGTTGGGTTaGACCTCGGGCAGTGTGAACCCAGGACAGCCTAAT +
Preference number: 6 (lower is better)
Translates to: RDLEAPPSTGLG*TSGSVNPGQPN
Trigger: ATTAGGCTGTCCTGGGTTCACACTGCCCGAGGTCAAACCCAACCCAGTGGAAGGAGGAGCTTCCAAGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000514004.5
ENST00000514933.2
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS CAA 90 bp TGCACAGTGAGGGGTACTGTACAGGGCCACCCTCCTACCTTCCCATaGATGATGGTGTCTATGCTCATGAGGGTGTACTCCTCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: CTVRGTVQGHPPTFP*MMVSMLMRVYSSAA
Trigger: CGCTGCAGAGGAGTACACCCTCATGAGCATAGACACCATCATCAATGGGAAGGTAGGAGGGTGGCCCTGTACAGTACCCCTCACTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504353.1
ENST00000515580.1
CDS CCA 72 bp AAACAGCTTGCTCATCAGCAGCAACCTCCATGGCCTTaGGTAGGGGCGTTGTGGAGTCATGCTTCAAGGCTG +
Preference number: 6 (lower is better)
Translates to: KQLAHQQQPPWP*VGALWSHASRL
Trigger: CAGCCTTGAAGCATGACTCCACAACGCCCCTACCCAAGGCCATGGAGGTTGCTGCTGATGAGCAAGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS CAA 90 bp GGAAAGAAGAGGGACTTGGAAGCTCCTCCTTCCACTGGGTTGGGTTaGACCTCGGGCAGTGTGAACCCAGGACAGCCTAATCTGGGAAAT +
Preference number: 6 (lower is better)
Translates to: GKKRDLEAPPSTGLG*TSGSVNPGQPNLGN
Trigger: ATTTCCCAGATTAGGCTGTCCTGGGTTCACACTGCCCGAGGTCAAACCCAACCCAGTGGAAGGAGGAGCTTCCAAGTCCCTCTTCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514004.5
ENST00000514933.2
ENST00000616923.5
ENST00000650454.1
CDS TCA 72 bp CCTTCCGGCGTTTTCGCATGTTGGCCTCAACTGTATTaGACTCGGACATTGTTCCTCCGTAGGGCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: PSGVFACWPQLY*TRTLFLRRAVL
Trigger: CAGGACAGCCCTACGGAGGAACAATGTCCGAGTTCAATACAGTTGAGGCCAACATGCGAAAACGCCGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000505294.5
ENST00000513939.6
ENST00000514004.5
ENST00000514933.2
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS TCA 72 bp GGAAACACACCTTCCTACAAGAAGCAGGACACTTTATaGACTCCCTGCCGGGGGATGTGCACAGTGAGGGGT +
Preference number: 6 (lower is better)
Translates to: GNTPSYKKQDTL*TPCRGMCTVRG
Trigger: ACCCCTCACTGTGCACATCCCCCGGCAGGGAGTTCATAAAGTGTCCTGCTTCTTGTAGGAAGGTGTGTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515580.1
CDS CAA 72 bp AGGGGTACTGTACAGGGCCACCCTCCTACCTTCCCATaGATGATGGTGTCTATGCTCATGAGGGTGTACTCC +
Preference number: 6 (lower is better)
Translates to: RGTVQGHPPTFP*MMVSMLMRVYS
Trigger: GGAGTACACCCTCATGAGCATAGACACCATCATCAATGGGAAGGTAGGAGGGTGGCCCTGTACAGTACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504353.1
ENST00000515580.1
CDS CAA 72 bp AAAACAGCTTGCTCATCAGCAGCAACCTCCATGGCCTaGGGTAGGGGCGTTGTGGAGTCATGCTTCAAGGCT +
Preference number: 6 (lower is better)
Translates to: KTACSSAATSMA*GRGVVESCFKA
Trigger: AGCCTTGAAGCATGACTCCACAACGCCCCTACCCAAGGCCATGGAGGTTGCTGCTGATGAGCAAGCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS CAA 90 bp GGAAAGAAGAGGGACTTGGAAGCTCCTCCTTCCACTGGGTTGGGTTaGACCTCGGGCAGTGTGAACCCAGGACAGCCTAATCTACAACAA +
Preference number: 6 (lower is better)
Translates to: GKKRDLEAPPSTGLG*TSGSVNPGQPNLQQ
Trigger: TTGTTGTAGATTAGGCTGTCCTGGGTTCACACTGCCCGAGGTCAAACCCAACCCAGTGGAAGGAGGAGCTTCCAAGTCCCTCTTCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643939.1
CDS TCA 72 bp CTGGCAGGCCCCAGCTGTCAAGGAAAGGTAGGCCAGTaGGTTCCTCATCAGATAGTTGCTATGAAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: LAGPSCQGKVGQ*VPHQIVAMKAH
Trigger: ATGAGCCTTCATAGCAACTATCTGATGAGGAACTCACTGGCCTACCTTTCCTTGACAGCTGGGGCCTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS CCA 72 bp GGTGCCCAGAAGAAAAACCCGAGTTGTAGAAAGACCTaGGGAGTAGGCTCAGAGAATGTCCTGAAGATGGGG +
Preference number: 6 (lower is better)
Translates to: GAQKKNPSCRKT*GVGSENVLKMG
Trigger: CCCCATCTTCAGGACATTCTCTGAGCCTACTCCCCAGGTCTTTCTACAACTCGGGTTTTTCTTCTGGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS CAA 90 bp TCTCCAAAGGGTAGGATGGTTTGGGTTTGTCCTTTCCCCCTTCTCTaGCAGAGTTTCAAGAACTTTCTCCCCAGACAGGACCAACCGGAC +
Preference number: 6 (lower is better)
Translates to: SPKGRMVWVCPFPLL*QSFKNFLPRQDQPD
Trigger: GTCCGGTTGGTCCTGTCTGGGGAGAAAGTTCTTGAAACTCTGCAAGAGAAGGGGGAAAGGACAAACCCAAACCATCCTACCCTTTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000505294.5
ENST00000513939.6
ENST00000514004.5
ENST00000514933.2
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS GCA 72 bp AGGAAAGGTAGGCCAGTGAGTTCCTCATCAGATAGTTaGTATGAAGGCTCATTTGGTGTCGGCAGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: RKGRPVSSSSDS*YEGSFGVGSSA
Trigger: GGCAGAGCTGCCGACACCAAATGAGCCTTCATAGCAACTATCTGATGAGGAACTCACTGGCCTACCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS CCA 72 bp CACCGCGTCCGGCCAACTATTGTTTTCAAACTTCACTaGTGGCAGTATGGTGAAGAGCTTGGAAGGGGGAAA +
Preference number: 6 (lower is better)
Translates to: HRVRPTIVFKLH*WQYGEELGRGK
Trigger: TTTCCCCCTTCCAAGCTCTTCACCATACTGCCACCAGTGAAGTTTGAAAACAATAGTTGGCCGGACGCGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS GCA 72 bp GTAGGATGGTTTGGGTTTGTCCTTTCCCCCTTCTCTTaGAGAGTTTCAAGAACTTTCTCCCCAGACAGGACC +
Preference number: 6 (lower is better)
Translates to: VGWFGFVLSPFS*RVSRTFSPDRT
Trigger: GGTCCTGTCTGGGGAGAAAGTTCTTGAAACTCTGCAAGAGAAGGGGGAAAGGACAAACCCAAACCATCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000505294.5
ENST00000513939.6
ENST00000514004.5
ENST00000514933.2
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS CCA 72 bp ATTGAACTCGGACATTGTTCCTCCGTAGGGCTGTCCTaGTGTCCCTTCAATCATGTAACTCCCATACTCTGG +
Preference number: 6 (lower is better)
Translates to: IELGHCSSVGLS*CPFNHVTPILW
Trigger: CCAGAGTATGGGAGTTACATGATTGAAGGGACACCAGGACAGCCCTACGGAGGAACAATGTCCGAGTTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000505294.5
ENST00000513939.6
ENST00000514004.5
ENST00000514933.2
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS CAA 72 bp GCCTTCAAAGTCCAAGTTCATTCCACTTTCCTCACATaGGGTTCTGCAAGCTGTCCAGGAAGCATAGCGGCT +
Preference number: 6 (lower is better)
Translates to: AFKVQVHSTFLT*GSASCPGSIAA
Trigger: AGCCGCTATGCTTCCTGGACAGCTTGCAGAACCCAATGTGAGGAAAGTGGAATGAACTTGGACTTTGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS CAA 72 bp GGTAGGATGGTTTGGGTTTGTCCTTTCCCCCTTCTCTaGCAGAGTTTCAAGAACTTTCTCCCCAGACAGGAC +
Preference number: 6 (lower is better)
Translates to: GRMVWVCPFPLL*QSFKNFLPRQD
Trigger: GTCCTGTCTGGGGAGAAAGTTCTTGAAACTCTGCAAGAGAAGGGGGAAAGGACAAACCCAAACCATCCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000505294.5
ENST00000513939.6
ENST00000514004.5
ENST00000514933.2
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS CAA 72 bp ACCTCTGTGACTGAGCCTTGCAACAGATATACAGTGTaGGGAGGGCAGGTGGCTGGTTCCCTTTATATAGCA +
Preference number: 6 (lower is better)
Translates to: TSVTEPCNRYTV*GGQVAGSLYIA
Trigger: TGCTATATAAAGGGAACCAGCCACCTGCCCTCCCAACACTGTATATCTGTTGCAAGGCTCAGTCACAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515580.1
CDS CAA 90 bp TTTCAAAGCACCTCTGTGACTGAGCCTTGCAACAGATATACAGTGTaGGGAGGGCAGGTGGCTGGTTCCCTTTATATAGCAGTGTCTCAC +
Preference number: 6 (lower is better)
Translates to: FQSTSVTEPCNRYTV*GGQVAGSLYIAVSH
Trigger: GTGAGACACTGCTATATAAAGGGAACCAGCCACCTGCCCTCCCAACACTGTATATCTGTTGCAAGGCTCAGTCACAGAGGTGCTTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515580.1
CDS GCA 72 bp AGAGATGAGCAACATGCTGGGCCAGGAGATGATCAATaGCTGCAAAAAGAGATCACATGGGAACTCACTGCA +
Preference number: 6 (lower is better)
Translates to: RDEQHAGPGDDQ*LQKEITWELTA
Trigger: TGCAGTGAGTTCCCATGTGATCTCTTTTTGCAGGCATTGATCATCTCCTGGCCCAGCATGTTGCTCATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504353.1
CDS CCA 72 bp TCCTGGTGTCCCTTCAATCATGTAACTCCCATACTCTaGTCTCCAAAGGGTAGGATGGTTTGGGTTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SWCPFNHVTPIL*SPKGRMVWVCP
Trigger: AGGACAAACCCAAACCATCCTACCCTTTGGAGACCAGAGTATGGGAGTTACATGATTGAAGGGACACCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000505294.5
ENST00000513939.6
ENST00000514004.5
ENST00000514933.2
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS CAA 72 bp GGGAGACTGAGAGTAGGGGATGGCTTAGGTTTTGGCTaGGGTGTTCAGAGGTTAGAGATAAAGAGGTGTCAT +
Preference number: 6 (lower is better)
Translates to: GRLRVGDGLGFG*GVQRLEIKRCH
Trigger: ATGACACCTCTTTATCTCTAACCTCTGAACACCCAAGCCAAAACCTAAGCCATCCCCTACTCTCAGTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS TCA 72 bp CTCCATGGGTCGAAATTCTACTCTCCATCCAATGTCTaGGTTTGGAGGAGGGGGCTTAAATCTCATTGTCTG +
Preference number: 6 (lower is better)
Translates to: LHGSKFYSPSNV*VWRRGLKSHCL
Trigger: CAGACAATGAGATTTAAGCCCCCTCCTCCAAACTCAGACATTGGATGGAGAGTAGAATTTCGACCCATGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000504353.1
ENST00000509541.5
ENST00000513939.6
ENST00000514373.3
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS GCA 72 bp CTCCAAGCAGAAACCTGGATTAAATATAAAACAGCTTaGTCATCAGCAGCAACCTCCATGGCCTTGGGTAGG +
Preference number: 6 (lower is better)
Translates to: LQAETWIKYKTA*SSAATSMALGR
Trigger: CCTACCCAAGGCCATGGAGGTTGCTGCTGATGAGCAAGCTGTTTTATATTTAATCCAGGTTTCTGCTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS CAA 90 bp TGGTGTCCACATCCACTTCCATGTTTTCAAGGTAAGAGTTCAGAATaGGGATCAGTCCAGGAAACACACCTTCCTACAAGAAGCAGGACA +
Preference number: 6 (lower is better)
Translates to: WCPHPLPCFQGKSSE*GSVQETHLPTRSRT
Trigger: TGTCCTGCTTCTTGTAGGAAGGTGTGTTTCCTGGACTGATCCCAATTCTGAACTCTTACCTTGAAAACATGGAAGTGGATGTGGACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515580.1
CDS TCA 72 bp CTTGGGTGTTCAGAGGTTAGAGATAAAGAGGTGTCATaGCATGATGGACTTACGAGGCCAAGAGAACAGACA +
Preference number: 6 (lower is better)
Translates to: LGCSEVRDKEVS*HDGLTRPREQT
Trigger: TGTCTGTTCTCTTGGCCTCGTAAGTCCATCATGTCATGACACCTCTTTATCTCTAACCTCTGAACACCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS CAA 72 bp AATATAGAAGTAGCCTCCTTCCGGCGTTTTCGCATGTaGGCCTCAACTGTATTGAACTCGGACATTGTTCCT +
Preference number: 6 (lower is better)
Translates to: NIEVASFRRFRM*ASTVLNSDIVP
Trigger: AGGAACAATGTCCGAGTTCAATACAGTTGAGGCCAACATGCGAAAACGCCGGAAGGAGGCTACTTCTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000505294.5
ENST00000513939.6
ENST00000514004.5
ENST00000514933.2
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS TCA 72 bp TCTACTGGCTTGTTGCCTTCCTATCCCTTCAGTCAGTaGGGGATGCAAAAGGGATTTGGACATGTTAACTAT +
Preference number: 6 (lower is better)
Translates to: STGLLPSYPFSQ*GMQKGFGHVNY
Trigger: ATAGTTAACATGTCCAAATCCCTTTTGCATCCCTCACTGACTGAAGGGATAGGAAGGCAACAAGCCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS GCA 72 bp AGTTATGACACTGTCTTGCTTGTAGTCAGGATGGTTTaGGATAAACTCCCTCATCCATCTGGCAACTGTCAT +
Preference number: 6 (lower is better)
Translates to: SYDTVLLVVRMV*DKLPHPSGNCH
Trigger: ATGACAGTTGCCAGATGGATGAGGGAGTTTATCGCAAACCATCCTGACTACAAGCAAGACAGTGTCATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000509541.5
ENST00000510837.5
ENST00000513939.6
ENST00000515580.1
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS TCA 72 bp CCAAAGATCACACTTGCAAACAGCAGAGCCAGTATTTaGTTCCAGGTTAGTTTGCCTTCAAAGTCCAAGTTC +
Preference number: 6 (lower is better)
Translates to: PKITLANSRASI*FQVSLPSKSKF
Trigger: GAACTTGGACTTTGAAGGCAAACTAACCTGGAATCAAATACTGGCTCTGCTGTTTGCAAGTGTGATCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS GCA 72 bp CAAACAGCAGAGCCAGTATTTGATTCCAGGTTAGTTTaGCTTCAAAGTCCAAGTTCATTCCACTTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: QTAEPVFDSRLV*LQSPSSFHFPH
Trigger: GTGAGGAAAGTGGAATGAACTTGGACTTTGAAGGCAAACTAACCTGGAATCAAATACTGGCTCTGCTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS GCA 72 bp GCTTGTTGCCTTCCTATCCCTTCAGTCAGTGAGGGATaGAAAAGGGATTTGGACATGTTAACTATTGTTTTC +
Preference number: 6 (lower is better)
Translates to: ACCLPIPSVSEG*KRDLDMLTIVF
Trigger: GAAAACAATAGTTAACATGTCCAAATCCCTTTTGCATCCCTCACTGACTGAAGGGATAGGAAGGCAACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS GCA 72 bp ATGTTTAGCAAAGCATTTTCTCTTCTACTGGCTTGTTaGCTTCCTATCCCTTCAGTCAGTGAGGGATGCAAA +
Preference number: 6 (lower is better)
Translates to: MFSKAFSLLLAC*LPIPSVSEGCK
Trigger: TTTGCATCCCTCACTGACTGAAGGGATAGGAAGGCAACAAGCCAGTAGAAGAGAAAATGCTTTGCTAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509541.5
CDS TCA 72 bp CTACCTTCATGTTCTCATCAACCTTTGACAGTGGAATaGGAAAATCCAATTTGTAGGAAAGGATCACTCTGG +
Preference number: 6 (lower is better)
Translates to: LPSCSHQPLTVE*ENPICRKGSLW
Trigger: CCAGAGTGATCCTTTCCTACAAATTGGATTTTCTCATTCCACTGTCAAAGGTTGATGAGAACATGAAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000504353.1
ENST00000509541.5
ENST00000510837.5
ENST00000513939.6
ENST00000616923.5
ENST00000643939.1
ENST00000650454.1
CDS TCA 72 bp TGTTTGTCTTTGATCTTGGTTTACAGAGGAGGAAGTTaGAGCTCACAGATTAGGAAGCATACCCAAAGATCA +
Preference number: 6 (lower is better)
Translates to: CLSLILVYRGGS*SSQIRKHTQRS
Trigger: TGATCTTTGGGTATGCTTCCTAATCTGTGAGCTTCAACTTCCTCCTCTGTAAACCAAGATCAAAGACAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505197.1
CDS GCA 72 bp ATAAAACATTCCCTGCAAGACAGCATCTCTTTTCTGTaGTACCTTCATGTTCTCATCAACCTAAGGGAAAAA +
Preference number: 6 (lower is better)
Translates to: IKHSLQDSISFL*YLHVLINLREK
Trigger: TTTTTCCCTTAGGTTGATGAGAACATGAAGGTAGCACAGAAAAGAGATGCTGTCTTGCAGGGAATGTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515580.1
CDS TCA 72 bp TGTGAGGACTGTATCACTCAATCATGGATTGGTATGTaGTTTTTCAACCAATCAGGGAATTTTAAGAGAAAC +
Preference number: 6 (lower is better)
Translates to: CEDCITQSWIGM*FFNQSGNFKRN
Trigger: GTTTCTCTTAAAATTCCCTGATTGGTTGAAAAATCACATACCAATCCATGATTGAGTGATACAGTCCTCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515580.1