RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GCH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000131979

Ensembl transcript IDs: ENST00000254299.8, ENST00000395514.5, ENST00000395521.6, ENST00000491895.7, ENST00000536224.2, ENST00000543643.6

Found 310 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTaGTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGACACACACT +
Preference number: 1 (lower is better)
Translates to: TLDTAHNVFHRQFIL*SFRCVEAMVLQTHT
Trigger: AGTGTGTGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395514.5
3UTR CCA 90 bp TCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATaGTTCTGCAGACCTGAAAATGATGGGCACTCTCAAATGTTTCTG +
Preference number: 1 (lower is better)
Translates to: STVSSFCARSGAWKL*FCRPENDGHSQMFL
Trigger: CAGAAACATTTGAGAGTGCCCATCATTTTCAGGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491895.7
3UTR GCA 90 bp ACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTaGTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGACACTATTA +
Preference number: 1 (lower is better)
Translates to: TLDTAHNVFHRQFIL*SFRCVEAMVLQTLL
Trigger: TAATAGTGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543643.6
3UTR GCA 90 bp GTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTaGAGACCTGAAAATGATGGGCACTCTCAAATGTTTCTGGAAATA +
Preference number: 1 (lower is better)
Translates to: VSSFCARSGAWKLWF*RPENDGHSQMFLEI
Trigger: TATTTCCAGAAACATTTGAGAGTGCCCATCATTTTCAGGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491895.7
3UTR CCA 90 bp AAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTaGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATG +
Preference number: 1 (lower is better)
Translates to: KETGTRSFQCIFTDR*YDTLWLKRWTQLIM
Trigger: CATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR CCA 90 bp TGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTaGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCT +
Preference number: 1 (lower is better)
Translates to: CIFTDRWYDTLWLKR*TQLIMSSTVSSFCA
Trigger: AGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR CCA 90 bp GGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCAGCTCGTTCAGGTGCGTaGAAGCTATGGTTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: GQDPHRPQRKPGPEASSAARSGA*KLWFCR
Trigger: TCTGCAGAACCATAGCTTCCACGCACCTGAACGAGC...TGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
3UTR-3UTR TCA 90 bp GGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCAACCACCTTCCCTTGGTaGCTAACATTACGACTGCTA +
Preference number: 2 (lower is better)
Translates to: GQDPHRPQRKPGPEASSATTFPW*LTLRLL
Trigger: TAGCAGTCGTAATGTTAGTCACCAAGGGAAGGTGGT...TGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
3UTR-3UTR GCA 90 bp AGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGACCTGAACGGACAGACAGACAATaGTACTGGCAGTACGATCGG +
Preference number: 2 (lower is better)
Translates to: SSFCARSGAWKLWFCRPERTDRQ*YWQYDR
Trigger: CCGATCGTACTGCCAGTAGCATTGTCTGTCTGTCCG...TTCAGGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
3UTR-3UTR TCA 90 bp GGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCAGAAGAAGAAACATTTTaGGGCATCTACATGGATCAC +
Preference number: 2 (lower is better)
Translates to: GQDPHRPQRKPGPEASSAEEETF*GIYMDH
Trigger: GTGATCCATGTAGATGCCTCAAAATGTTTCTTCTTC...TGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491895.7
3UTR-3UTR GCA 90 bp ATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGGACTGTGCTCGTTCAGGTaGGTGGAAGCTATGGTTCTG +
Preference number: 2 (lower is better)
Translates to: IPSIRSYNEDKTHIDHKGLCSFR*VEAMVL
Trigger: CAGAACCATAGCTTCCACGCACCTGAACGAGCACAG...TCCTTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
3UTR-3UTR GCA 90 bp ATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGGACGTCAGTTCATTCTGTaGTCGTTCAGGTGCGTGGAA +
Preference number: 2 (lower is better)
Translates to: IPSIRSYNEDKTHIDHKGRQFIL*SFRCVE
Trigger: TTCCACGCACCTGAACGAGCACAGAATGAACTGACG...TCCTTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR GCA 90 bp ATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTAATACCTCTGCCATCTTaGCCCATCATAACCCAAATA +
Preference number: 2 (lower is better)
Translates to: IMSSTVSSFCARSGAWKLIPLPS*PIITQI
Trigger: TATTTGGGTTATGATGGGGCAAGATGGCAGAGGTAT...TAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
3UTR CAA 90 bp GTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTaGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGC +
Preference number: 2 (lower is better)
Translates to: VHFHRSLVRYALVKT*DTAHNVFHRQFILC
Trigger: GCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR CAA 90 bp AAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTaGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAAT +
Preference number: 2 (lower is better)
Translates to: KGNRDQKLPVHFHRS*VRYALVKTLDTAHN
Trigger: ATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR GCA 90 bp AGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACCTGTGCTCGTTCAGGTaGGTGGAAGCTATGGTTCTG +
Preference number: 2 (lower is better)
Translates to: RIKIPIPSIRSYNEDKTHLCSFR*VEAMVL
Trigger: CAGAACCATAGCTTCCACGCACCTGAACGAGCACAG...GTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
3UTR-3UTR GCA 90 bp GCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGCGTCAGTTCATTCTGTaGTCGTTCAGGTGCGTGGAA +
Preference number: 2 (lower is better)
Translates to: ASRIKIPIPSIRSYNEDKRQFIL*SFRCVE
Trigger: TTCCACGCACCTGAACGAGCACAGAATGAACTGACG...CTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR TCA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGTATACGGAGTTACAATaGGGACAAGACCCACATAGA +
Preference number: 2 (lower is better)
Translates to: KVLKPTITVLKLQKEKARYTELQ*GQDPHR
Trigger: TCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATA...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR GCA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGATACCTCTGCCATCTTaGCCCATCATAACCCAAATA +
Preference number: 2 (lower is better)
Translates to: KVLKPTITVLKLQKEKARIPLPS*PIITQI
Trigger: TATTTGGGTTATGATGGGGCAAGATGGCAGAGGTAT...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR TCA 90 bp GCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGTATACGGAGTTACAATaGGGACAAGACCCACATAGA +
Preference number: 2 (lower is better)
Translates to: ASRIKIPIPSIRSYNEDKYTELQ*GQDPHR
Trigger: TCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATA...CTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR CAA 90 bp ATTCTTATCAAGGCACAGAGAGTTAAATGTCTAAATCCCTGTATGTaGACACGAGAATACACTCGTAAACAACACCAGGAACTAATTCCC +
Preference number: 2 (lower is better)
Translates to: ILIKAQRVKCLNPCM*TREYTRKQHQELIP
Trigger: GGGAATTAGTTCCTGGTGTTGTTTACGAGTGTATTCTCGTGTCAACATACAGGGATTTAGACATTTAACTCTCTGTGCCTTGATAAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
3UTR-3UTR GCA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGTTTCTGTGGAGGAGTTaGGGTTTTGTTTGTTTTAAT +
Preference number: 2 (lower is better)
Translates to: KVLKPTITVLKLQKEKARFLWRS*GFVCFN
Trigger: ATTAAAACAAACAAAACCGCAACTCCTCCACAGAAA...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR CCA 90 bp GCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGCTTTGGTTAAAACGTTaGACACAGCTCATAATGTCT +
Preference number: 2 (lower is better)
Translates to: ATASRIKIPIPSIRSYNELWLKR*TQLIMS
Trigger: AGACATTATGAGCTGTGTCCAACGTTTTAACCAAAG...CTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR CCA 90 bp GCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGCTTTGGTTAAAACGTTaGACACAGCTCATAATGTCT +
Preference number: 2 (lower is better)
Translates to: ASRIKIPIPSIRSYNEDKLWLKR*TQLIMS
Trigger: AGACATTATGAGCTGTGTCCAACGTTTTAACCAAAG...CTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR CCA 90 bp TCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCATTTTCACAGATCGTTaGTACGATACGCTTTGGTTA +
Preference number: 2 (lower is better)
Translates to: SRIKIPIPSIRSYNEDKTIFTDR*YDTLWL
Trigger: TAACCAAAGCGTATCGTACCAACGATCTGTGAAAAT...GGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR GCA 72 bp GTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTaGGTGGAAGCTATGGTTCTGCAGACACACACTGAA +
Preference number: 3 (lower is better)
Translates to: VFHRQFILCSFR*VEAMVLQTHTE
Trigger: TTCAGTGTGTGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395514.5
3UTR CCA 72 bp TCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTaGAAGCTATGGTTCTGCAGACCTGAAAATGATGGG +
Preference number: 3 (lower is better)
Translates to: STVSSFCARSGA*KLWFCRPENDG
Trigger: CCCATCATTTTCAGGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491895.7
3UTR GCA 72 bp ACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTaGTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: TAHNVFHRQFIL*SFRCVEAMVLQ
Trigger: CTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
3UTR GCA 72 bp GTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTaGGTGGAAGCTATGGTTCTGCAGACACTATTAGCA +
Preference number: 3 (lower is better)
Translates to: VFHRQFILCSFR*VEAMVLQTLLA
Trigger: TGCTAATAGTGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543643.6
3UTR CCA 72 bp AGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATaGTTCTGCAGACCTGAAAATGATGGGCACTCTCAA +
Preference number: 3 (lower is better)
Translates to: SSFCARSGAWKL*FCRPENDGHSQ
Trigger: TTGAGAGTGCCCATCATTTTCAGGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491895.7
3UTR CCA 72 bp GGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTaGTACGATACGCTTTGGTTAAAACGTTGGACACAG +
Preference number: 3 (lower is better)
Translates to: GTRSFQCIFTDR*YDTLWLKRWTQ
Trigger: CTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR CAA 90 bp ATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTACATTTTCACAGATCGTaGGTACGATACGCTTTGGTT +
Preference number: 3 (lower is better)
Translates to: IMSSTVSSFCARSGAWKLHFHRS*VRYALV
Trigger: AACCAAAGCGTATCGTACCAACGATCTGTGAAAATG...TAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
3UTR CCA 72 bp ACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTaGACACAGCTCATAATGTCTTCCACCGTCAGTTCA +
Preference number: 3 (lower is better)
Translates to: TDRWYDTLWLKR*TQLIMSSTVSS
Trigger: TGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR CAA 90 bp AGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTTGTTTGTTTTAATTaGGCCCACGCTGCCCCAATG +
Preference number: 3 (lower is better)
Translates to: RSLVRYALVKTLDTAHNVFVCFN*AHAAPM
Trigger: CATTGGGGCAGCGTGGGCCAAATTAAAACAAACAAA...GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR CCA 72 bp CAGTGCATTTTCACAGATCGTTGGTACGATACGCTTTaGTTAAAACGTTGGACACAGCTCATAATGTCTTCC +
Preference number: 3 (lower is better)
Translates to: QCIFTDRWYDTL*LKRWTQLIMSS
Trigger: GGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR CAA 90 bp AGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACTTCCACCACCTTCCCTaGGTGACTAACATTACGACT +
Preference number: 3 (lower is better)
Translates to: RIKIPIPSIRSYNEDKTHFHHLP*VTNITT
Trigger: AGTCGTAATGTTAGTCACCAAGGGAAGGTGGTGGAA...GTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491895.7
3UTR-3UTR CAA 90 bp TCACAGAGCAATACCGCACTAAATATTTTAGCACTTTCGGCACTACACCACTTTGCTTTGGTTAAAACGTaGGACACAGCTCATAATGTC +
Preference number: 3 (lower is better)
Translates to: SQSNTALNILALSALHHFALVKT*DTAHNV
Trigger: GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGC...AAAGTGGTGTAGTGCCGAAAGTGCTAAAATATTTAGTGCGGTATTGCTCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491895.7
3UTR-3UTR CAA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGGGTAATGGGATGAATTaGAAGAGCACTATGTCAACC +
Preference number: 3 (lower is better)
Translates to: KVLKPTITVLKLQKEKARGNGMN*KSTMST
Trigger: GGTTGACATAGTGCTCTTCAAATTCATCCCATTACC...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR CAA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGCTAAATCCCTGTATGTaGACACGAGAATACACTCGT +
Preference number: 3 (lower is better)
Translates to: KVLKPTITVLKLQKEKARLNPCM*TREYTR
Trigger: ACGAGTGTATTCTCGTGTCAACATACAGGGATTTAG...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491895.7
3UTR-3UTR CAA 90 bp TCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCGCTTTGGTTAAAACGTaGGACACAGCTCATAATGTC +
Preference number: 3 (lower is better)
Translates to: SRIKIPIPSIRSYNEDKTALVKT*DTAHNV
Trigger: GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGC...GGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR CAA 90 bp AGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACCATTTTCACAGATCGTaGGTACGATACGCTTTGGTT +
Preference number: 3 (lower is better)
Translates to: RIKIPIPSIRSYNEDKTHHFHRS*VRYALV
Trigger: AACCAAAGCGTATCGTACCAACGATCTGTGAAAATG...GTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR-3UTR CAA 90 bp GCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGCATTTTCACAGATCGTaGGTACGATACGCTTTGGTT +
Preference number: 3 (lower is better)
Translates to: ASRIKIPIPSIRSYNEDKHFHRS*VRYALV
Trigger: AACCAAAGCGTATCGTACCAACGATCTGTGAAAATG...CTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTACCCGCCGCAGCCGCTaGCGTTCGGGAAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: VFHRQFILCSFRCVEAMVTRRSR*RSGRTP
Trigger: CGGGGTCCTTCCCGAACGGCAGCGGCTGCGGCGGGT...AACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR GCA 90 bp CACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGCGGCTTCTCCGCCGGTaGCCGCACAGGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HRQFILCSFRCVEAMVLQRLLRR*PHRALL
Trigger: GAGAAGGGCCCTGTGCGGGCACCGGCGGAGAAGCCG...CTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR CCA 90 bp GAGGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCAGGGCCCTTCTCCATaGACCCGCCGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: EDKTHIDHKGNRDQKLPVQGPSP*TRRSRC
Trigger: GCAGCGGCTGCGGCGGGTCCATGGAGAAGGGCCCTG...CACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp TCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCCAGGGCCCTTCTCCATaGACCCGCCGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: STVSSFCARSGAWKLWFCQGPSP*TRRSRC
Trigger: GCAGCGGCTGCGGCGGGTCCATGGAGAAGGGCCCTG...GCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR GCA 90 bp ACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTGGACCCGCCGCAGCCGCTaGCGTTCGGGAAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: TTKETGTRSFQCIFTDRWTRRSR*RSGRTP
Trigger: CGGGGTCCTTCCCGAACGGCAGCGGCTGCGGCGGGT...CCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp TCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCCGTTATCCTCCTCGCTaGGGGGCCGCTCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: STVSSFCARSGAWKLWFCRYPPR*GAARPS
Trigger: GGAAGGGCGAGCGGCCCCGCAGCGAGGAGGATAACG...GCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR GCA 90 bp CACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGCGTTATCCTCCTCGCTaGGGGGCCGCTCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: HRQFILCSFRCVEAMVLQRYPPR*GAARPS
Trigger: GGAAGGGCGAGCGGCCCCGCAGCGAGGAGGATAACG...CTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR CCA 90 bp TCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGCAGCCCTTGCCGCTaGGGGTTCTCGCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: STVSSFCARSGAWKLWFCSSPCR*GFSPSE
Trigger: CTCGCTGGGCGAGAACCCCCAGCGGCAAGGGCTGCT...GCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR GCA 90 bp ACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTGGGCTCGGGGAACCCATTaGTGCACCTGGCGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: TTKETGTRSFQCIFTDRWARGTH*CTWRPA
Trigger: CGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGC...CCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp ATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTACGGGGAACCCATTGCTaGACCTGGCGCCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: IMSSTVSSFCARSGAWKLRGTHC*TWRPAA
Trigger: AGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCG...TAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR GCA 90 bp ATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGGCTCGGGGAACCCATTaGTGCACCTGGCGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: IDHKGNRDQKLPVHFHRSARGTH*CTWRPA
Trigger: CGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGC...CGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp GACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCAACCCATTGCTGCACCTaGCGCCCCGCGGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: DPHRPQRKPGPEASSAFSTHCCT*RPAASP
Trigger: CGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGT...TGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp GTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGACACGTGGCCGGAGTCACCTaGGGAAGGTACGCAACCTGC +
Preference number: 4 (lower is better)
Translates to: VSSFCARSGAWKLWFCRHVAGVT*GRYATC
Trigger: GCAGGTTGCGTACCTTCCTCAGGTGACTCCGGCCAC...GTGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000543643.6
CDS-3UTR TCA 90 bp GAGGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCCTGGTAGCCCTTGGTaGAGAACTGCATGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: EDKTHIDHKGNRDQKLPVPGSPW*RTAWPR
Trigger: CCTCGGCCATGCAGTTCTTCACCAAGGGCTACCAGG...CACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp CGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAACCCATTGCTGCACCTaGCGCCCCGCGGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: RWTQLIMSSTVSSFCARSTHCCT*RPAASP
Trigger: CGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGT...TGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp ACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCACCCATTGCTGCACCTaGCGCCCCGCGGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: TLDTAHNVFHRQFILCSFTHCCT*RPAASP
Trigger: CGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGT...GAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp AGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTAGCAGCCCTTGCCGCTaGGGGTTCTCGCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: RPQRKPGPEASSAFSQIVSSPCR*GFSPSE
Trigger: CTCGCTGGGCGAGAACCCCCAGCGGCAAGGGCTGCT...AACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp CAAACAAGACCGGACAGACAGACAATGCTACTGGCAGTACGATCGGCAACCAACGGACGAGTAGGCGGCTaGCAGGTTAGGGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: QTRPDRQTMLLAVRSATNGRVGG*QVREVQ
Trigger: CTGAACCTCCCTAACCTGGCAGCCGCCTACTCGTCC...GTTGGTTGCCGATCGTACTGCCAGTAGCATTGTCTGTCTGTCCGGTCTTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CCA 90 bp TGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCCAGGGCCCTTCTCCATaGACCCGCCGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: WYDTLWLKRWTQLIMSSTQGPSP*TRRSRC
Trigger: GCAGCGGCTGCGGCGGGTCCATGGAGAAGGGCCCTG...GGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp ATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGGTGGCCGGAGTCACCTaGGGAAGGTACGCAACCTGC +
Preference number: 4 (lower is better)
Translates to: IDHKGNRDQKLPVHFHRSVAGVT*GRYATC
Trigger: GCAGGTTGCGTACCTTCCTCAGGTGACTCCGGCCAC...CGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp CCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAACGGCTTCTCCGCCGGTaGCCGCACAGGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PIPSIRSYNEDKTHIDHKRLLRR*PHRALL
Trigger: GAGAAGGGCCCTGTGCGGGCACCGGCGGAGAAGCCG...TTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp AGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCCGGGGAACCCATTGCTaGACCTGGCGCCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: RSLVRYALVKTLDTAHNVRGTHC*TWRPAA
Trigger: AGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCG...GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACACGGGGAACCCATTGCTaGACCTGGCGCCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: VHFHRSLVRYALVKTLDTRGTHC*TWRPAA
Trigger: AGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCG...TGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp TGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGGGGAACCCATTaGTGCACCTGGCGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: WLKRWTQLIMSSTVSSFCARGTH*CTWRPA
Trigger: CGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGC...ACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp CCAGTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACCGTTATCCTCCTCGCTaGGGGGCCGCTCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PVHFHRSLVRYALVKTLDRYPPR*GAARPS
Trigger: GGAAGGGCGAGCGGCCCCGCAGCGAGGAGGATAACG...GTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp AGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGACCTGAAGCGGACAATGGGCTGTaGCCGGAGTCACCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SSFCARSGAWKLWFCRPEADNGL*PESPEE
Trigger: TTCCTCAGGTGACTCCGGCCACAGCCCATTGTCCGC...TTCAGGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CCA 90 bp ATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGGCTAAACTCCGCCGGTaGCCGCGGACAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: IDHKGNRDQKLPVHFHRSAKLRR*PRTMGC
Trigger: ACAGCCCATTGTCCGCGGCCACCGGCGGAGTTTAGC...CGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp CGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCACCAGCGAGCTCAGGATaGACGAGTAGGCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RWTQLIMSSTVSSFCARSPASSG*TSRRLP
Trigger: TGGCAGCCGCCTACTCGTCCATCCTGAGCTCGCTGG...TGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp GAGGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCTCTTCCCGAGTCTTTaGATCCTCCCGGAACACACC +
Preference number: 4 (lower is better)
Translates to: EDKTHIDHKGNRDQKLPVLFPSL*ILPEHT
Trigger: GGTGTGTTCCGGGAGGATCCAAAGACTCGGGAAGAG...CACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR GCA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGCGGGGAACCCATTGCTaGACCTGGCGCCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: KVLKPTITVLKLQKEKARRGTHC*TWRPAA
Trigger: AGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCG...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACACGTTATCCTCCTCGCTaGGGGGCCGCTCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VHFHRSLVRYALVKTLDTRYPPR*GAARPS
Trigger: GGAAGGGCGAGCGGCCCCGCAGCGAGGAGGATAACG...TGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp CCAGTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACGTCTTGAGCAGCCCTTaGCGCTGGGGGTTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: PVHFHRSLVRYALVKTLDVLSSP*RWGFSP
Trigger: GGGCGAGAACCCCCAGCGGCAAGGGCTGCTCAAGAC...GTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GAGGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCTGTGCTCGTTCAGGTaGGTGGAAGCTATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: EDKTHIDHKGNRDQKLPVLCSFR*VEAMVL
Trigger: CAGAACCATAGCTTCCACGCACCTGAACGAGCACAG...CACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp TGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTAGCAGCCCTTGCCGCTaGGGGTTCTCGCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: WLKRWTQLIMSSTVSSFCSSPCR*GFSPSE
Trigger: CTCGCTGGGCGAGAACCCCCAGCGGCAAGGGCTGCT...ACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp GACCGGACAGACAGACAATGCTACTGGCAGTACGATCGGCAACCAACGCACACAGACAGACAATGCTACTaGCAGTACGATCGGCAACCA +
Preference number: 4 (lower is better)
Translates to: DRTDRQCYWQYDRQPTHTDRQCY*QYDRQP
Trigger: TGGTTGCCGATCGTACTGCCAGTAGCATTGTCTGTC...TGTGTGCGTTGGTTGCCGATCGTACTGCCAGTAGCATTGTCTGTCTGTCCGGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR TCA 90 bp CACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGGCCGCAAGGCTTCCGTaGTTGCTACAGCAATTTGTT +
Preference number: 4 (lower is better)
Translates to: HRQFILCSFRCVEAMVLQAARLP*LLQQFV
Trigger: AACAAATTGCTGTAGCAATCACGGAAGCCTTGCGGC...CTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR GCA 90 bp AGGCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGCGGCTTCTCCGCCGGTaGCCGCACAGGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RQQLPGLKYLYHLYGVTMRLLRR*PHRALL
Trigger: GAGAAGGGCCCTGTGCGGGCACCGGCGGAGAAGCCG...CATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGGCTCGGGGAACCCATTaGTGCACCTGGCGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: ASRIKIPIPSIRSYNEDKARGTH*CTWRPA
Trigger: CGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGC...CTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp AGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCGTCTTGAGCAGCCCTTaGCGCTGGGGGTTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: RSLVRYALVKTLDTAHNVVLSSP*RWGFSP
Trigger: GGGCGAGAACCCCCAGCGGCAAGGGCTGCTCAAGAC...GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp TGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGTCTTGAGCAGCCCTTaGCGCTGGGGGTTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: WLKRWTQLIMSSTVSSFCVLSSP*RWGFSP
Trigger: GGGCGAGAACCCCCAGCGGCAAGGGCTGCTCAAGAC...ACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp AGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACCAGGGCCCTTCTCCATaGACCCGCCGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RIKIPIPSIRSYNEDKTHQGPSP*TRRSRC
Trigger: GCAGCGGCTGCGGCGGGTCCATGGAGAAGGGCCCTG...GTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGACCCATTGCTGCACCTaGCGCCCCGCGGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: KVLKPTITVLKLQKEKARTHCCT*RPAASP
Trigger: CGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGT...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGAGCAGCCCTTGCCGCTaGGGGTTCTCGCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: KVLKPTITVLKLQKEKARSSPCR*GFSPSE
Trigger: CTCGCTGGGCGAGAACCCCCAGCGGCAAGGGCTGCT...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp GTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACAGTGGCCGGAGTCACCTaGGGAAGGTACGCAACCTGC +
Preference number: 4 (lower is better)
Translates to: VHFHRSLVRYALVKTLDTVAGVT*GRYATC
Trigger: GCAGGTTGCGTACCTTCCTCAGGTGACTCCGGCCAC...TGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCAGGAAGGTACGCAACCTaGTTAGATCACACTCCGAGC +
Preference number: 4 (lower is better)
Translates to: DPHRPQRKPGPEASSAFSGRYAT*LDHTPS
Trigger: GCTCGGAGTGTGATCTAAGCAGGTTGCGTACCTTCC...TGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
CDS-3UTR GCA 90 bp AAGGCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATCGGCTTCTCCGCCGGTaGCCGCACAGGGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KATASRIKIPIPSIRSYNRLLRR*PHRALL
Trigger: GAGAAGGGCCCTGTGCGGGCACCGGCGGAGAAGCCG...ATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp CCAGTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACGGACGAGTAGGCGGCTaGCAGGTTAGGGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PVHFHRSLVRYALVKTLDGRVGG*QVREVQ
Trigger: CTGAACCTCCCTAACCTGGCAGCCGCCTACTCGTCC...GTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTGGACGAGTAGGCGGCTaGCAGGTTAGGGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: VRYALVKTLDTAHNVFHRGRVGG*QVREVQ
Trigger: CTGAACCTCCCTAACCTGGCAGCCGCCTACTCGTCC...ACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGGTCTTGAGCAGCCCTTaGCGCTGGGGGTTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: KVLKPTITVLKLQKEKARVLSSP*RWGFSP
Trigger: GGGCGAGAACCCCCAGCGGCAAGGGCTGCTCAAGAC...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp ACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTGGCGGACAGACAGACAATaGTACTGGCAGTACGATCGG +
Preference number: 4 (lower is better)
Translates to: TTKETGTRSFQCIFTDRWRTDRQ*YWQYDR
Trigger: CCGATCGTACTGCCAGTAGCATTGTCTGTCTGTCCG...CCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CCA 90 bp TGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGCGGACAATGGGCTGTaGCCGGAGTCACCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: WYDTLWLKRWTQLIMSSTADNGL*PESPEE
Trigger: TTCCTCAGGTGACTCCGGCCACAGCCCATTGTCCGC...GGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp GCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGGGTGGCCGCGGACAATaGGCTGTGGCCGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: ASRIKIPIPSIRSYNEDKGGRGQ*AVAGVT
Trigger: GGTGACTCCGGCCACAGCCCATTGTCCGCGGCCACC...CTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp AGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCGCTAAACTCCGCCGGTaGCCGCGGACAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RSLVRYALVKTLDTAHNVAKLRR*PRTMGC
Trigger: ACAGCCCATTGTCCGCGGCCACCGGCGGAGTTTAGC...GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp CCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGCTAAACTCCGCCGGTaGCCGCGGACAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PIPSIRSYNEDKTHIDHKAKLRR*PRTMGC
Trigger: ACAGCCCATTGTCCGCGGCCACCGGCGGAGTTTAGC...TTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp TTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGTTAGGACATCTGAGATaGTCTCCTGGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: FHRQFILCSFRCVEAMVLLGHLR*SPGSPW
Trigger: CCAAGGGCTACCAGGAGACCATCTCAGATGTCCTAA...CAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR CCA 90 bp GCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGGTGCGTGGAAGCTATaGTTCTGCAGACACACACTG +
Preference number: 4 (lower is better)
Translates to: AHNVFHRQFILCSFRCVEGAWKL*FCRHTL
Trigger: CAGTGTGTGTCTGCAGAACCATAGCTTCCACGCACC...TTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395514.5
CDS-3UTR TCA 90 bp CGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCATCCTCGCAAGTTTGCTaGGGCCAAGGACTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RWTQLIMSSTVSSFCARSSSQVC*GQGLAC
Trigger: ACAAGCAAGTCCTTGGCCTCAGCAAACTTGCGAGGA...TGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp ATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGGAAACCGGGACTCCTCGCAAGTTTGCTaGGGCCAAGGACTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: IRSYNEDKTHIDHKGNRDSSQVC*GQGLAC
Trigger: ACAAGCAAGTCCTTGGCCTCAGCAAACTTGCGAGGA...GTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp GCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCCGCAAGGCTTCCGTaGTTGCTACAGCAATTTGTT +
Preference number: 4 (lower is better)
Translates to: AHNVFHRQFILCSFRCVEAARLP*LLQQFV
Trigger: AACAAATTGCTGTAGCAATCACGGAAGCCTTGCGGC...TTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp ATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGCTGTGCTCGTTCAGGTaGGTGGAAGCTATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: IDHKGNRDQKLPVHFHRSLCSFR*VEAMVL
Trigger: CAGAACCATAGCTTCCACGCACCTGAACGAGCACAG...CGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp AGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTCTGTGCTCGTTCAGGTaGGTGGAAGCTATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RPQRKPGPEASSAFSQIVLCSFR*VEAMVL
Trigger: CAGAACCATAGCTTCCACGCACCTGAACGAGCACAG...AACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp ACAAACAAGACCGGACAGACAGACAATGCTACTGGCAGTACGATCGGCAACCAACGTCAGTTCATTCTGTaGTCGTTCAGGTGCGTGGAA +
Preference number: 4 (lower is better)
Translates to: TNKTGQTDNATGSTIGNQRQFIL*SFRCVE
Trigger: TTCCACGCACCTGAACGAGCACAGAATGAACTGACG...TTGGTTGCCGATCGTACTGCCAGTAGCATTGTCTGTCTGTCCGGTCTTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR GCA 90 bp ACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTGGCGTCAGTTCATTCTGTaGTCGTTCAGGTGCGTGGAA +
Preference number: 4 (lower is better)
Translates to: TTKETGTRSFQCIFTDRWRQFIL*SFRCVE
Trigger: TTCCACGCACCTGAACGAGCACAGAATGAACTGACG...CCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp AGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGACCTGAATTAGGACATCTGAGATaGTCTCCTGGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSFCARSGAWKLWFCRPELGHLR*SPGSPW
Trigger: CCAAGGGCTACCAGGAGACCATCTCAGATGTCCTAA...TTCAGGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CCA 90 bp ACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTGGTTAGGACATCTGAGATaGTCTCCTGGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: TTKETGTRSFQCIFTDRWLGHLR*SPGSPW
Trigger: CCAAGGGCTACCAGGAGACCATCTCAGATGTCCTAA...CCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp CGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGCTCGTTCAGGTGCGTaGAAGCTATGGTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RWTQLIMSSTVSSFCARSARSGA*KLWFCR
Trigger: TCTGCAGAACCATAGCTTCCACGCACCTGAACGAGC...TGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp GCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGTGGCCGGAGTCACCTaGGGAAGGTACGCAACCTGC +
Preference number: 4 (lower is better)
Translates to: ATASRIKIPIPSIRSYNEVAGVT*GRYATC
Trigger: GCAGGTTGCGTACCTTCCTCAGGTGACTCCGGCCAC...CTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp ATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTAGCCGCAAGGCTTCCGTaGTTGCTACAGCAATTTGTT +
Preference number: 4 (lower is better)
Translates to: IMSSTVSSFCARSGAWKLAARLP*LLQQFV
Trigger: AACAAATTGCTGTAGCAATCACGGAAGCCTTGCGGC...TAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR GCA 90 bp ATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTACGTCAGTTCATTCTGTaGTCGTTCAGGTGCGTGGAA +
Preference number: 4 (lower is better)
Translates to: IMSSTVSSFCARSGAWKLRQFIL*SFRCVE
Trigger: TTCCACGCACCTGAACGAGCACAGAATGAACTGACG...TAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR GCA 90 bp ACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGAACCAGAAGCTTCCAGTaGATTTTCACAGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: TVSSFCARSGAWKLWFCRTRSFQ*IFTDRW
Trigger: CCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGT...TCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR CCA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGGCGGACAATGGGCTGTaGCCGGAGTCACCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: KVLKPTITVLKLQKEKARADNGL*PESPEE
Trigger: TTCCTCAGGTGACTCCGGCCACAGCCCATTGTCCGC...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp TCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCGCTAAACTCCGCCGGTaGCCGCGGACAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SRIKIPIPSIRSYNEDKTAKLRR*PRTMGC
Trigger: ACAGCCCATTGTCCGCGGCCACCGGCGGAGTTTAGC...GGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp TCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCCAGCGAGCTCAGGATaGACGAGTAGGCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRIKIPIPSIRSYNEDKTPASSG*TSRRLP
Trigger: TGGCAGCCGCCTACTCGTCCATCCTGAGCTCGCTGG...GGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp AGGCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGCCAGCGAGCTCAGGATaGACGAGTAGGCGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RQQLPGLKYLYHLYGVTMPASSG*TSRRLP
Trigger: TGGCAGCCGCCTACTCGTCCATCCTGAGCTCGCTGG...CATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp ATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTAGGACATCTGAGATaGTCTCCTGGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: IDHKGNRDQKLPVHFHRSLGHLR*SPGSPW
Trigger: CCAAGGGCTACCAGGAGACCATCTCAGATGTCCTAA...CGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp TCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCGACCTTTCCAACAAATaGAACCAAGTGATGCTCACA +
Preference number: 4 (lower is better)
Translates to: STVSSFCARSGAWKLWFCDLSNK*NQVMLT
Trigger: TGTGAGCATCACTTGGTTCCATTTGTTGGAAAGGTC...GCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR CCA 90 bp GGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCAGACCTTTCCAACAAATaGAACCAAGTGATGCTCACA +
Preference number: 4 (lower is better)
Translates to: GQDPHRPQRKPGPEASSADLSNK*NQVMLT
Trigger: TGTGAGCATCACTTGGTTCCATTTGTTGGAAAGGTC...TGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp GAGGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGTGGTACGATACGCTTTaGTTAAAACGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: EDKTHIDHKGNRDQKLPVWYDTL*LKRWTQ
Trigger: CTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA...CACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp CACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGTGGTACGATACGCTTTaGTTAAAACGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: HRQFILCSFRCVEAMVLQWYDTL*LKRWTQ
Trigger: CTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA...CTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR TCA 90 bp GAAAATGGAATGTACAAACAAGACCGGACAGACAGACAATGCTACTGGCAGTACTCCTCGCAAGTTTGCTaGGGCCAAGGACTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ENGMYKQDRTDRQCYWQYSSQVC*GQGLAC
Trigger: ACAAGCAAGTCCTTGGCCTCAGCAAACTTGCGAGGA...GTACTGCCAGTAGCATTGTCTGTCTGTCCGGTCTTGTTTGTACATTCCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR TCA 90 bp AGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTACCACCTTCCCTTGGTaGCTAACATTACGACTGCTA +
Preference number: 4 (lower is better)
Translates to: RPQRKPGPEASSAFSQIVTTFPW*LTLRLL
Trigger: TAGCAGTCGTAATGTTAGTCACCAAGGGAAGGTGGT...AACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR TCA 90 bp ATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGACACACACTGAATaGAGCTCAGCTCCTAATGAG +
Preference number: 4 (lower is better)
Translates to: IRSYNEDKTHIDHKGNRDQTHTE*SSAPNE
Trigger: CTCATTAGGAGCTGAGCTTCATTCAGTGTGTGTCTG...GTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395514.5
CDS-3UTR GCA 90 bp GAGGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCAAGGCTTCCGTGATTaGTACAGCAATTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: EDKTHIDHKGNRDQKLPVQGFRD*YSNLFC
Trigger: ACAAAACAAATTGCTGTAGCAATCACGGAAGCCTTG...CACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp CCAGTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACTGGTTCTGCAGACGTTaGTTCAACCACTACCCCGAC +
Preference number: 4 (lower is better)
Translates to: PVHFHRSLVRYALVKTLDWFCRR*FNHYPD
Trigger: GTCGGGGTAGTGGTTGAAGCAACGTCTGCAGAACCA...GTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536224.2
CDS-3UTR CCA 90 bp GCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGCGGACAATGGGCTGTaGCCGGAGTCACCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: ATASRIKIPIPSIRSYNEADNGL*PESPEE
Trigger: TTCCTCAGGTGACTCCGGCCACAGCCCATTGTCCGC...CTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp TGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGCCCCTCTGGTTATCTaGCAGTGGTTTTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: WYDTLWLKRWTQLIMSSTAPLVI*QWFCAR
Trigger: ACGTGCACAAAACCACTGCCAGATAACCAGAGGGGC...GGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CCA 90 bp GTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTGCTCGTTCAGGTGCGTaGAAGCTATGGTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VRYALVKTLDTAHNVFHRARSGA*KLWFCR
Trigger: TCTGCAGAACCATAGCTTCCACGCACCTGAACGAGC...ACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp TCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGACACATTGTTTGTTTTAATTTaGCCCACGCTGCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: SVHSVLVQVRGSYGSADTLFVLI*PTLPQW
Trigger: CCATTGGGGCAGCGTGGGCCAAATTAAAACAAACAA...TGTGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395514.5
CDS-3UTR TCA 90 bp ATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGGATCCTCGCAAGTTTGCTaGGGCCAAGGACTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: IPSIRSYNEDKTHIDHKGSSQVC*GQGLAC
Trigger: ACAAGCAAGTCCTTGGCCTCAGCAAACTTGCGAGGA...TCCTTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp TGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGCCGCAAGGCTTCCGTaGTTGCTACAGCAATTTGTT +
Preference number: 4 (lower is better)
Translates to: WYDTLWLKRWTQLIMSSTAARLP*LLQQFV
Trigger: AACAAATTGCTGTAGCAATCACGGAAGCCTTGCGGC...GGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp GCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAATGCCAAACATGAGTTaGGTGCTCAGAATTCTACCT +
Preference number: 4 (lower is better)
Translates to: AHNVFHRQFILCSFRCVEMPNMS*VLRILP
Trigger: AGGTAGAATTCTGAGCACTCAACTCATGTTTGGCAT...TTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp AAGGCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGGACGAGTAGGCGGCTaGCAGGTTAGGGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: KATASRIKIPIPSIRSYNGRVGG*QVREVQ
Trigger: CTGAACCTCCCTAACCTGGCAGCCGCCTACTCGTCC...ATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTTGCTGGTCACAGTTTTaGTGTTCATTTTCTGTACAC +
Preference number: 4 (lower is better)
Translates to: VFHRQFILCSFRCVEAMVCWSQF*CSFSVH
Trigger: GTGTACAGAAAATGAACAGCAAAACTGTGACCAGCA...AACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR GCA 90 bp AGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTACACACCCAACATTGTaGTGGTCACAGTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RPQRKPGPEASSAFSQIVTHPTL*WSQFCC
Trigger: ACAGCAAAACTGTGACCAGCACAATGTTGGGTGTGT...AACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CCA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGCTCTTCCCGAGTCTTTaGATCCTCCCGGAACACACC +
Preference number: 4 (lower is better)
Translates to: KVLKPTITVLKLQKEKARLFPSL*ILPEHT
Trigger: GGTGTGTTCCGGGAGGATCCAAAGACTCGGGAAGAG...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CCA 90 bp TGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTCTTCCCAGGCCCCTCTaGTTATCTGGCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: WLKRWTQLIMSSTVSSFCLPRPL*LSGSGF
Trigger: AAAACCACTGCCAGATAACCAGAGGGGCCTGGGAAG...ACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CCA 90 bp AGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCGCTCGTTCAGGTGCGTaGAAGCTATGGTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RSLVRYALVKTLDTAHNVARSGA*KLWFCR
Trigger: TCTGCAGAACCATAGCTTCCACGCACCTGAACGAGC...GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp GAGGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCTTTGGTTAAAACGTTaGACACAGCTCATAATGTCT +
Preference number: 4 (lower is better)
Translates to: EDKTHIDHKGNRDQKLPVLWLKR*TQLIMS
Trigger: AGACATTATGAGCTGTGTCCAACGTTTTAACCAAAG...CACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp CCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGGTGCGTGGAAGCTATaGTTCTGCAGACGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PIPSIRSYNEDKTHIDHKGAWKL*FCRRCF
Trigger: GAAGCAACGTCTGCAGAACCATAGCTTCCACGCACC...TTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536224.2
3UTR CAA 72 bp CGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTaGGTACGATACGCTTTGGTTAAAACGTTGGACACA +
Preference number: 4 (lower is better)
Translates to: RDQKLPVHFHRS*VRYALVKTLDT
Trigger: TGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp ACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGAATGCTCCTATGCTTATaGGGCAAATTACTGTACTAT +
Preference number: 4 (lower is better)
Translates to: TVSSFCARSGAWKLWFCRMLLCL*GKLLYY
Trigger: ATAGTACAGTAATTTGCCTCATAAGCATAGGAGCAT...TCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR TCA 90 bp ACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCTATACGGAGTTACAATaGGGACAAGACCCACATAGA +
Preference number: 4 (lower is better)
Translates to: TLDTAHNVFHRQFILCSFYTELQ*GQDPHR
Trigger: TCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATA...GAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp AGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTATGCCAAACATGAGTTaGGTGCTCAGAATTCTACCT +
Preference number: 4 (lower is better)
Translates to: RPQRKPGPEASSAFSQIVMPNMS*VLRILP
Trigger: AGGTAGAATTCTGAGCACTCAACTCATGTTTGGCAT...AACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp ATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTAATGCCAAACATGAGTTaGGTGCTCAGAATTCTACCT +
Preference number: 4 (lower is better)
Translates to: IMSSTVSSFCARSGAWKLMPNMS*VLRILP
Trigger: AGGTAGAATTCTGAGCACTCAACTCATGTTTGGCAT...TAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR TCA 90 bp ACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGATTAAAATGCCAAACATaGGTTGAGTGCTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: TVSSFCARSGAWKLWFCRLKCQT*VECSEF
Trigger: GAATTCTGAGCACTCAACTCATGTTTGGCATTTTAA...TCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR GCA 90 bp TCACAGAGCAATACCGCACTAAATATTTTAGCACTTTCGGCACTACACCACTTTGGAAGGTACGCAACCTaGTTAGATCACACTCCGAGC +
Preference number: 4 (lower is better)
Translates to: SQSNTALNILALSALHHFGRYAT*LDHTPS
Trigger: GCTCGGAGTGTGATCTAAGCAGGTTGCGTACCTTCC...AAAGTGGTGTAGTGCCGAAAGTGCTAAAATATTTAGTGCGGTATTGCTCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR GCA 90 bp GGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTCTGTGGAGGAGTTaGGGTTTTGTTTGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: GQDPHRPQRKPGPEASSAFLWRS*GFVCFN
Trigger: ATTAAAACAAACAAAACCGCAACTCCTCCACAGAAA...TGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp CCAGTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACGGTGCGTGGAAGCTATaGTTCTGCAGACCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: PVHFHRSLVRYALVKTLDGAWKL*FCRPEN
Trigger: ATTTTCAGGTCTGCAGAACCATAGCTTCCACGCACC...GTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491895.7
3UTR CAA 72 bp CACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTaGGACACAGCTCATAATGTCTTCCACCGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: HRSLVRYALVKT*DTAHNVFHRQF
Trigger: GAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp ACAAACAAGACCGGACAGACAGACAATGCTACTGGCAGTACGATCGGCAACCAAAAGTTAAAACTGAGCTaGCTAGTTATTTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: TNKTGQTDNATGSTIGNQKLKLS*LVICSV
Trigger: CACACTGCAAATAACTAGTCAGCTCAGTTTTAACTT...TTGGTTGCCGATCGTACTGCCAGTAGCATTGTCTGTCTGTCCGGTCTTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR TCA 90 bp TCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGACACATTAAAATGCCAAACATaGGTTGAGTGCTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: SVHSVLVQVRGSYGSADTLKCQT*VECSEF
Trigger: GAATTCTGAGCACTCAACTCATGTTTGGCATTTTAA...TGTGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395514.5
CDS-3UTR GCA 90 bp GCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGGGAAGGTACGCAACCTaGTTAGATCACACTCCGAGC +
Preference number: 4 (lower is better)
Translates to: ASRIKIPIPSIRSYNEDKGRYAT*LDHTPS
Trigger: GCTCGGAGTGTGATCTAAGCAGGTTGCGTACCTTCC...CTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
CDS-3UTR GCA 90 bp CCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAACCCTCTCATTCCCAATaGTCCTATGCTTATGAGGCA +
Preference number: 4 (lower is better)
Translates to: PIPSIRSYNEDKTHIDHKPSHSQ*SYAYEA
Trigger: TGCCTCATAAGCATAGGAGCATTGGGAATGAGAGGG...TTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR GCA 90 bp GAAAATGGAATGTACAAACAAGACCGGACAGACAGACAATGCTACTGGCAGTACTGGAAGCTATGGTTCTaGAGACCTGAAAATGATGGG +
Preference number: 4 (lower is better)
Translates to: ENGMYKQDRTDRQCYWQYWKLWF*RPENDG
Trigger: CCCATCATTTTCAGGTCTGCAGAACCATAGCTTCCA...GTACTGCCAGTAGCATTGTCTGTCTGTCCGGTCTTGTTTGTACATTCCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR GCA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGCGTCAGTTCATTCTGTaGTCGTTCAGGTGCGTGGAA +
Preference number: 4 (lower is better)
Translates to: KVLKPTITVLKLQKEKARRQFIL*SFRCVE
Trigger: TTCCACGCACCTGAACGAGCACAGAATGAACTGACG...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp TGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCACCAGAAGCTTCCAGTaGATTTTCACAGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: WYDTLWLKRWTQLIMSSTTRSFQ*IFTDRW
Trigger: CCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGT...GGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp TCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCGCTCGTTCAGGTGCGTaGAAGCTATGGTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SRIKIPIPSIRSYNEDKTARSGA*KLWFCR
Trigger: TCTGCAGAACCATAGCTTCCACGCACCTGAACGAGC...GGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp ACAAACAAGACCGGACAGACAGACAATGCTACTGGCAGTACGATCGGCAACCAACTTTGGTTAAAACGTTaGACACAGCTCATAATGTCT +
Preference number: 4 (lower is better)
Translates to: TNKTGQTDNATGSTIGNQLWLKR*TQLIMS
Trigger: AGACATTATGAGCTGTGTCCAACGTTTTAACCAAAG...TTGGTTGCCGATCGTACTGCCAGTAGCATTGTCTGTCTGTCCGGTCTTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CCA 90 bp TGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCTTGTTTGTTTTAATTTaGCCCACGCTGCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: WYDTLWLKRWTQLIMSSTLFVLI*PTLPQW
Trigger: CCATTGGGGCAGCGTGGGCCAAATTAAAACAAACAA...GGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTATACCTCTGCCATCTTaGCCCATCATAACCCAAATA +
Preference number: 4 (lower is better)
Translates to: VRYALVKTLDTAHNVFHRIPLPS*PIITQI
Trigger: TATTTGGGTTATGATGGGGCAAGATGGCAGAGGTAT...ACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTTGGAAGCTATGGTTCTaGAGACACACACTGAATGAA +
Preference number: 4 (lower is better)
Translates to: VRYALVKTLDTAHNVFHRWKLWF*RHTLNE
Trigger: TTCATTCAGTGTGTGTCTGCAGAACCATAGCTTCCA...ACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395514.5
CDS-3UTR CCA 90 bp GTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACACACCCAACATTGTGCTaGTCACAGTTTTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: VHFHRSLVRYALVKTLDTHPTLC*SQFCCS
Trigger: TGAACAGCAAAACTGTGACCAGCACAATGTTGGGTG...TGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CCA 90 bp ATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGCTTTGGTTAAAACGTTaGACACAGCTCATAATGTCT +
Preference number: 4 (lower is better)
Translates to: IDHKGNRDQKLPVHFHRSLWLKR*TQLIMS
Trigger: AGACATTATGAGCTGTGTCCAACGTTTTAACCAAAG...CGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp CGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAATTTTCACAGATCGTTaGTACGATACGCTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: RWTQLIMSSTVSSFCARSIFTDR*YDTLWL
Trigger: TAACCAAAGCGTATCGTACCAACGATCTGTGAAAAT...TGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp AGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTATTTTCACAGATCGTTaGTACGATACGCTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: RPQRKPGPEASSAFSQIVIFTDR*YDTLWL
Trigger: TAACCAAAGCGTATCGTACCAACGATCTGTGAAAAT...AACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp ACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCATTTTCACAGATCGTTaGTACGATACGCTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: TLDTAHNVFHRQFILCSFIFTDR*YDTLWL
Trigger: TAACCAAAGCGTATCGTACCAACGATCTGTGAAAAT...GAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp TGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTTTGTTTGTTTTAATTTaGCCCACGCTGCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: WLKRWTQLIMSSTVSSFCLFVLI*PTLPQW
Trigger: CCATTGGGGCAGCGTGGGCCAAATTAAAACAAACAA...ACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp ATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGGATTGTTTGTTTTAATTTaGCCCACGCTGCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: IPSIRSYNEDKTHIDHKGLFVLI*PTLPQW
Trigger: CCATTGGGGCAGCGTGGGCCAAATTAAAACAAACAA...TCCTTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR CAA 72 bp CCAGTGCATTTTCACAGATCGTTGGTACGATACGCTTaGGTTAAAACGTTGGACACAGCTCATAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: PVHFHRSLVRYA*VKTLDTAHNVF
Trigger: GAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp TGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTTATACGGAGTTACAATaGGGACAAGACCCACATAGA +
Preference number: 4 (lower is better)
Translates to: WLKRWTQLIMSSTVSSFCYTELQ*GQDPHR
Trigger: TCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATA...ACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp CCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAATATACGGAGTTACAATaGGGACAAGACCCACATAGA +
Preference number: 4 (lower is better)
Translates to: PIPSIRSYNEDKTHIDHKYTELQ*GQDPHR
Trigger: TCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATA...TTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp ATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGGATATACGGAGTTACAATaGGGACAAGACCCACATAGA +
Preference number: 4 (lower is better)
Translates to: IPSIRSYNEDKTHIDHKGYTELQ*GQDPHR
Trigger: TCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATA...TCCTTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTCAAGGCTTCCGTGATTaGTACAGCAATTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VRYALVKTLDTAHNVFHRQGFRD*YSNLFC
Trigger: ACAAAACAAATTGCTGTAGCAATCACGGAAGCCTTG...ACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp CCAGTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACTGCTGGTCACAGTTTTaGTGTTCATTTTCTGTACAC +
Preference number: 4 (lower is better)
Translates to: PVHFHRSLVRYALVKTLDCWSQF*CSFSVH
Trigger: GTGTACAGAAAATGAACAGCAAAACTGTGACCAGCA...GTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR GCA 90 bp AAGGTACTCAAGCCAACCATCACTGTACTTAAACTCCAGAAAGAAAAAGCTAGGACCAGAAGCTTCCAGTaGATTTTCACAGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: KVLKPTITVLKLQKEKARTRSFQ*IFTDRW
Trigger: CCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGT...CCTAGCTTTTTCTTTCTGGAGTTTAAGTACAGTGATGGTTGGCTTGAGTACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp ACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCTTTCTGTGGAGGAGTTaGGGTTTTGTTTGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: TLDTAHNVFHRQFILCSFFLWRS*GFVCFN
Trigger: ATTAAAACAAACAAAACCGCAACTCCTCCACAGAAA...GAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp AGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCATACCTCTGCCATCTTaGCCCATCATAACCCAAATA +
Preference number: 4 (lower is better)
Translates to: RSLVRYALVKTLDTAHNVIPLPS*PIITQI
Trigger: TATTTGGGTTATGATGGGGCAAGATGGCAGAGGTAT...GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp GTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACAGACCTTTCCAACAAATaGAACCAAGTGATGCTCACA +
Preference number: 4 (lower is better)
Translates to: VHFHRSLVRYALVKTLDTDLSNK*NQVMLT
Trigger: TGTGAGCATCACTTGGTTCCATTTGTTGGAAAGGTC...TGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp GTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACAGAAGAAGAAACATTTTaGGGCATCTACATGGATCAC +
Preference number: 4 (lower is better)
Translates to: VHFHRSLVRYALVKTLDTEEETF*GIYMDH
Trigger: GTGATCCATGTAGATGCCTCAAAATGTTTCTTCTTC...TGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR GCA 90 bp AGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCCAAGGCTTCCGTGATTaGTACAGCAATTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: RSLVRYALVKTLDTAHNVQGFRD*YSNLFC
Trigger: ACAAAACAAATTGCTGTAGCAATCACGGAAGCCTTG...GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp TCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCACACACCCAACATTGTaGTGGTCACAGTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRIKIPIPSIRSYNEDKTTHPTL*WSQFCC
Trigger: ACAGCAAAACTGTGACCAGCACAATGTTGGGTGTGT...GGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CCA 90 bp TCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACCCAACATTGTGCTaGTCACAGTTTTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SRIKIPIPSIRSYNEDKTHPTLC*SQFCCS
Trigger: TGAACAGCAAAACTGTGACCAGCACAATGTTGGGTG...GGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CCA 90 bp CGCACTAAATATTTTAGCACTTTCGGCACTACACCACTTTTATTGGAGGAAGAACTGGTTATCTGGCAGTaGTTTTGTGCACGTACTTAC +
Preference number: 4 (lower is better)
Translates to: RTKYFSTFGTTPLLLEEELVIWQ*FCARTY
Trigger: GTAAGTACGTGCACAAAACCACTGCCAGATAACCAG...TTCTTCCTCCAATAAAAGTGGTGTAGTGCCGAAAGTGCTAAAATATTTAGTGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CCA 90 bp GTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACATTTGAGGCATCTACATaGATCACACAAAGGAAACTC +
Preference number: 4 (lower is better)
Translates to: VHFHRSLVRYALVKTLDTFEAST*ITQRKL
Trigger: GAGTTTCCTTTGTGTGATCCATGTAGATGCCTCAAA...TGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR TCA 90 bp AGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATGCCAAACATGAGTTaGGTGCTCAGAATTCTACCT +
Preference number: 4 (lower is better)
Translates to: RIKIPIPSIRSYNEDKTHMPNMS*VLRILP
Trigger: AGGTAGAATTCTGAGCACTCAACTCATGTTTGGCAT...GTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp AAGGCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATACCAGAAGCTTCCAGTaGATTTTCACAGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: KATASRIKIPIPSIRSYNTRSFQ*IFTDRW
Trigger: CCAACGATCTGTGAAAATGCACTGGAAGCTTCTGGT...ATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp CCAGTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACTTTCTGTGGAGGAGTTaGGGTTTTGTTTGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: PVHFHRSLVRYALVKTLDFLWRS*GFVCFN
Trigger: ATTAAAACAAACAAAACCGCAACTCCTCCACAGAAA...GTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp AGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATACCTCTGCCATCTTaGCCCATCATAACCCAAATA +
Preference number: 4 (lower is better)
Translates to: RIKIPIPSIRSYNEDKTHIPLPS*PIITQI
Trigger: TATTTGGGTTATGATGGGGCAAGATGGCAGAGGTAT...GTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGATACCTCTGCCATCTTaGCCCATCATAACCCAAATA +
Preference number: 4 (lower is better)
Translates to: ASRIKIPIPSIRSYNEDKIPLPS*PIITQI
Trigger: TATTTGGGTTATGATGGGGCAAGATGGCAGAGGTAT...CTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp GCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGGACCTTTCCAACAAATaGAACCAAGTGATGCTCACA +
Preference number: 4 (lower is better)
Translates to: ASRIKIPIPSIRSYNEDKDLSNK*NQVMLT
Trigger: TGTGAGCATCACTTGGTTCCATTTGTTGGAAAGGTC...CTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp TCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCTGGTACGATACGCTTTaGTTAAAACGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: SRIKIPIPSIRSYNEDKTWYDTL*LKRWTQ
Trigger: CTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA...GGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp CGCACTAAATATTTTAGCACTTTCGGCACTACACCACTTTTATTGGAGGAAGAATGGTACGATACGCTTTaGTTAAAACGTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: RTKYFSTFGTTPLLLEEEWYDTL*LKRWTQ
Trigger: CTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA...TTCTTCCTCCAATAAAAGTGGTGTAGTGCCGAAAGTGCTAAAATATTTAGTGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CCA 90 bp AGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCATTTTCACAGATCGTTaGTACGATACGCTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: RSLVRYALVKTLDTAHNVIFTDR*YDTLWL
Trigger: TAACCAAAGCGTATCGTACCAACGATCTGTGAAAAT...GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
3UTR CAA 72 bp AAGGCACAGAGAGTTAAATGTCTAAATCCCTGTATGTaGACACGAGAATACACTCGTAAACAACACCAGGAA +
Preference number: 4 (lower is better)
Translates to: KAQRVKCLNPCM*TREYTRKQHQE
Trigger: TTCCTGGTGTTGTTTACGAGTGTATTCTCGTGTCAACATACAGGGATTTAGACATTTAACTCTCTGTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR TCA 90 bp TCACAGAGCAATACCGCACTAAATATTTTAGCACTTTCGGCACTACACCACTTTTTAAAATGCCAAACATaGGTTGAGTGCTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: SQSNTALNILALSALHHFLKCQT*VECSEF
Trigger: GAATTCTGAGCACTCAACTCATGTTTGGCATTTTAA...AAAGTGGTGTAGTGCCGAAAGTGCTAAAATATTTAGTGCGGTATTGCTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR GCA 90 bp GCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGCAAGGCTTCCGTGATTaGTACAGCAATTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ATASRIKIPIPSIRSYNEQGFRD*YSNLFC
Trigger: ACAAAACAAATTGCTGTAGCAATCACGGAAGCCTTG...CTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR TCA 90 bp AGGCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGTTAAAATGCCAAACATaGGTTGAGTGCTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: RQQLPGLKYLYHLYGVTMLKCQT*VECSEF
Trigger: GAATTCTGAGCACTCAACTCATGTTTGGCATTTTAA...CATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR GCA 90 bp GCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGTTTCTGTGGAGGAGTTaGGGTTTTGTTTGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: ATASRIKIPIPSIRSYNEFLWRS*GFVCFN
Trigger: ATTAAAACAAACAAAACCGCAACTCCTCCACAGAAA...CTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CCA 90 bp AAGGCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATCTTTGGTTAAAACGTTaGACACAGCTCATAATGTCT +
Preference number: 4 (lower is better)
Translates to: KATASRIKIPIPSIRSYNLWLKR*TQLIMS
Trigger: AGACATTATGAGCTGTGTCCAACGTTTTAACCAAAG...ATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS GCA 90 bp GCTGCGCGCTCTTGGCCTCGGGCCGCGGGGGCTTCTCCGCCGGCCTaGTGGGCCCGGGCCGCGGCGGATCCCGCTCGGGGAACCCATTGC +
Preference number: 5 (lower is better)
Translates to: AARSWPRAAGASPPA*WARAAADPARGTHC
Trigger: GCAATGGGTTCCCCGAGCGGGATCCGCCGCGGCCCGGGCCCAGCAGGCCGGCGGAGAAGCCCCCGCGGCCCGAGGCCAAGAGCGCGCAGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CCA 90 bp GCGCGCTCTTGGCCTCGGGCCGCGGGGGCTTCTCCGCCGGCCTGCTaGGCCCGGGCCGCGGCGGATCCCGCTCGGGGAACCCATTGCTGC +
Preference number: 5 (lower is better)
Translates to: ARSWPRAAGASPPAC*ARAAADPARGTHCC
Trigger: GCAGCAATGGGTTCCCCGAGCGGGATCCGCCGCGGCCCGGGCCCAGCAGGCCGGCGGAGAAGCCCCCGCGGCCCGAGGCCAAGAGCGCGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS GCA 90 bp TGCTGGGCCCGGGCCGCGGCGGATCCCGCTCGGGGAACCCATTGCTaGACCTGGCGCCCCGCGGCTTCTCCGCCGGTGCCCGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: CWARAAADPARGTHC*TWRPAASPPVPAQG
Trigger: GCCCTGTGCGGGCACCGGCGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCGGGATCCGCCGCGGCCCGGGCCCAGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS GCA 90 bp GCCTGCTGGGCCCGGGCCGCGGCGGATCCCGCTCGGGGAACCCATTaGTGCACCTGGCGCCCCGCGGCTTCTCCGCCGGTGCCCGCACAG +
Preference number: 5 (lower is better)
Translates to: ACWARAAADPARGTH*CTWRPAASPPVPAQ
Trigger: CTGTGCGGGCACCGGCGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCGGGATCCGCCGCGGCCCGGGCCCAGCAGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CCA 90 bp GCCCGGGCCGCGGCGGATCCCGCTCGGGGAACCCATTGCTGCACCTaGCGCCCCGCGGCTTCTCCGCCGGTGCCCGCACAGGGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: ARAAADPARGTHCCT*RPAASPPVPAQGPS
Trigger: AGAAGGGCCCTGTGCGGGCACCGGCGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCGGGATCCGCCGCGGCCCGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS GCA 90 bp GGGGAACCCATTGCTGCACCTGGCGCCCCGCGGCTTCTCCGCCGGTaGCCGCACAGGGCCCTTCTCCATGGACCCGCCGCAGCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: GEPIAAPGAPRLLRR*PHRALLHGPAAAAA
Trigger: GGCAGCGGCTGCGGCGGGTCCATGGAGAAGGGCCCTGTGCGGGCACCGGCGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CCA 90 bp GAAGGACCCCGGGGCGCTTCGAGGTCTGCGGCTAAACTCCGCCGGTaGCCGCGGACAATGGGCTGTGGCCGGAGTCACCTGAGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: EGPRGASRSAAKLRR*PRTMGCGRSHLRKV
Trigger: TACCTTCCTCAGGTGACTCCGGCCACAGCCCATTGTCCGCGGCCACCGGCGGAGTTTAGCCGCAGACCTCGAAGCGCCCCGGGGTCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS GCA 90 bp CTGGGGGTTCTCGCCCAGCGAGCTCAGGATGGACGAGTAGGCGGCTaGCAGGTTAGGGAGGTTCAGCTCGTTATCCTCCTCGCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: LGVLAQRAQDGRVGG*QVREVQLVILLAAG
Trigger: CCCCGCAGCGAGGAGGATAACGAGCTGAACCTCCCTAACCTGGCAGCCGCCTACTCGTCCATCCTGAGCTCGCTGGGCGAGAACCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS TCA 90 bp AACTCCGCCGGTGGCCGCGGACAATGGGCTGTGGCCGGAGTCACCTaGGGAAGGTACGCAACCTGCTTAGATCACACTCCGAGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: NSAGGRGQWAVAGVT*GRYATCLDHTPSRE
Trigger: CTCCCGGCTCGGAGTGTGATCTAAGCAGGTTGCGTACCTTCCTCAGGTGACTCCGGCCACAGCCCATTGTCCGCGGCCACCGGCGGAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
CDS-3UTR CAA 90 bp GGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCACGCTCGGGGAACCCATaGCTGCACCTGGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: GQDPHRPQRKPGPEASSARSGNP*LHLAPR
Trigger: GCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCG...TGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp ACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGACGCTCGGGGAACCCATaGCTGCACCTGGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: TVSSFCARSGAWKLWFCRRSGNP*LHLAPR
Trigger: GCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCG...TCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR CAA 90 bp TGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTGCCCTCCAGGGCGTCTaGAGCAGCCCTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: CLPPSVHSVLVQVRGSYGALQGV*SSPCRW
Trigger: CCAGCGGCAAGGGCTGCTCAAGACGCCCTGGAGGGC...ACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR CAA 90 bp GACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCAGCCCTCCAGGGCGTCTaGAGCAGCCCTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: DPHRPQRKPGPEASSAFSALQGV*SSPCRW
Trigger: CCAGCGGCAAGGGCTGCTCAAGACGCCCTGGAGGGC...TGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp CGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGCCCTCCAGGGCGTCTaGAGCAGCCCTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: RWTQLIMSSTVSSFCARSALQGV*SSPCRW
Trigger: CCAGCGGCAAGGGCTGCTCAAGACGCCCTGGAGGGC...TGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp AGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTGCCCTCCAGGGCGTCTaGAGCAGCCCTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: RPQRKPGPEASSAFSQIVALQGV*SSPCRW
Trigger: CCAGCGGCAAGGGCTGCTCAAGACGCCCTGGAGGGC...AACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp AGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACCGCTCGGGGAACCCATaGCTGCACCTGGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: RIKIPIPSIRSYNEDKTHRSGNP*LHLAPR
Trigger: GCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCG...GTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp AGGCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGCGCTCGGGGAACCCATaGCTGCACCTGGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: RQQLPGLKYLYHLYGVTMRSGNP*LHLAPR
Trigger: GCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCG...CATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp GACCGGACAGACAGACAATGCTACTGGCAGTACGATCGGCAACCAACGCACACAGCTGAGGCCAAGGACTaGCTTGTTAGGAAGATAACC +
Preference number: 5 (lower is better)
Translates to: DRTDRQCYWQYDRQPTHTAEAKD*LVRKIT
Trigger: GGTTATCTTCCTAACAAGCAAGTCCTTGGCCTCAGC...TGTGTGCGTTGGTTGCCGATCGTACTGCCAGTAGCATTGTCTGTCTGTCCGGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CAA 90 bp CACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGACAATCCTCGCAAGTTaGCTGAGGCCAAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: HRQFILCSFRCVEAMVLQTILAS*LRPRTC
Trigger: GCAAGTCCTTGGCCTCAGCAAACTTGCGAGGATTGT...CTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS-3UTR CAA 90 bp GGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCAATGGTTCTGCAGACGTaGCTTCAACCACTACCCCGA +
Preference number: 5 (lower is better)
Translates to: GQDPHRPQRKPGPEASSAMVLQT*LQPLPR
Trigger: TCGGGGTAGTGGTTGAAGCAACGTCTGCAGAACCAT...TGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536224.2
CDS GCA 90 bp GCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTaGGTGGAAGCTATGGTTCTGCAGACGTTGCTTCAACCACTACCC +
Preference number: 5 (lower is better)
Translates to: AHNVFHRQFILCSFR*VEAMVLQTLLQPLP
Trigger: GGGTAGTGGTTGAAGCAACGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536224.2
CDS-3UTR CAA 90 bp GCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGCGTCTTGAGCAGCCCTaGCCGCTGGGGGTTCTCGCC +
Preference number: 5 (lower is better)
Translates to: ASRIKIPIPSIRSYNEDKRLEQP*PLGVLA
Trigger: GGCGAGAACCCCCAGCGGCAAGGGCTGCTCAAGACG...CTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp CGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAACTCTTCCCGAGTCTTaGGATCCTCCCGGAACACAC +
Preference number: 5 (lower is better)
Translates to: RWTQLIMSSTVSSFCARSTLPES*DPPGTH
Trigger: GTGTGTTCCGGGAGGATCCAAAGACTCGGGAAGAGT...TGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS TCA 90 bp AATGCTACTGGCAGTACGATCGGCAACCAACGCACACACACTGAATaGAGCTCAGCTCCTAATGAGAGTCAGGAACTCTTCCCGAGTCTT +
Preference number: 5 (lower is better)
Translates to: NATGSTIGNQRTHTE*SSAPNESQELFPSL
Trigger: AAGACTCGGGAAGAGTTCCTGACTCTCATTAGGAGCTGAGCTTCATTCAGTGTGTGTGCGTTGGTTGCCGATCGTACTGCCAGTAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254299.8
ENST00000491895.7
CDS GCA 90 bp ACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTaGTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGACGTTGCTT +
Preference number: 5 (lower is better)
Translates to: TLDTAHNVFHRQFIL*SFRCVEAMVLQTLL
Trigger: AAGCAACGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536224.2
CDS-3UTR CAA 90 bp AGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTACAATCCTCGCAAGTTaGCTGAGGCCAAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: RPQRKPGPEASSAFSQIVTILAS*LRPRTC
Trigger: GCAAGTCCTTGGCCTCAGCAAACTTGCGAGGATTGT...AACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp ACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGGGAACACACCCAACATaGTGCTGGTCACAGTTTTGC +
Preference number: 5 (lower is better)
Translates to: TQLIMSSTVSSFCARSGAGTHPT*CWSQFC
Trigger: GCAAAACTGTGACCAGCACAATGTTGGGTGTGTTCC...CGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS CCA 90 bp CTTCCCGAGTCTTTGGATCCTCCCGGAACACACCCAACATTGTGCTaGTCACAGTTTTGCTGTTCATTTTCTGTACACCTCGCATTACCA +
Preference number: 5 (lower is better)
Translates to: LPESLDPPGTHPTLC*SQFCCSFSVHLALP
Trigger: TGGTAATGCGAGGTGTACAGAAAATGAACAGCAAAACTGTGACCAGCACAATGTTGGGTGTGTTCCGGGAGGATCCAAAGACTCGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CAA 90 bp CCAGTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACTCTTCCCGAGTCTTaGGATCCTCCCGGAACACAC +
Preference number: 5 (lower is better)
Translates to: PVHFHRSLVRYALVKTLDTLPES*DPPGTH
Trigger: GTGTGTTCCGGGAGGATCCAAAGACTCGGGAAGAGT...GTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CAA 90 bp GAGGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGTATCTGGCAGTGGTTTaGTGCACGTACTTACACTAT +
Preference number: 5 (lower is better)
Translates to: EDKTHIDHKGNRDQKLPVYLAVV*CTYLHY
Trigger: ATAGTGTAAGTACGTGCACAAAACCACTGCCAGATA...CACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CAA 90 bp TCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCCTAAATCCCTGTATGTaGACACGAGAATACACTCGT +
Preference number: 5 (lower is better)
Translates to: STVSSFCARSGAWKLWFCLNPCM*TREYTR
Trigger: ACGAGTGTATTCTCGTGTCAACATACAGGGATTTAG...GCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CAA 90 bp ACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGAGGAGGAGTTGCGGTTTaGTTTGTTTTAATTTGGCCC +
Preference number: 5 (lower is better)
Translates to: TVSSFCARSGAWKLWFCRGGVAV*FVLIWP
Trigger: GGGCCAAATTAAAACAAACAAAACCGCAACTCCTCC...TCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS GCA 90 bp ACTCTTCCCGAGTCTTTGGATCCTCCCGGAACACACCCAACATTGTaGTGGTCACAGTTTTGCTGTTCATTTTCTGTACACCTCGCATTA +
Preference number: 5 (lower is better)
Translates to: TLPESLDPPGTHPTL*WSQFCCSFSVHLAL
Trigger: TAATGCGAGGTGTACAGAAAATGAACAGCAAAACTGTGACCAGCACAATGTTGGGTGTGTTCCGGGAGGATCCAAAGACTCGGGAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CAA 90 bp TGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCACAATCCTCGCAAGTTaGCTGAGGCCAAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: WYDTLWLKRWTQLIMSSTTILAS*LRPRTC
Trigger: GCAAGTCCTTGGCCTCAGCAAACTTGCGAGGATTGT...GGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp ATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATTCCACCACCTTCCCTaGGTGACTAACATTACGACT +
Preference number: 5 (lower is better)
Translates to: IMSSTVSSFCARSGAWKLFHHLP*VTNITT
Trigger: AGTCGTAATGTTAGTCACCAAGGGAAGGTGGTGGAA...TAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CAA 90 bp TCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGACACATTTGTTTGTTTTAATTaGGCCCACGCTGCCCCAATG +
Preference number: 5 (lower is better)
Translates to: SVHSVLVQVRGSYGSADTFVCFN*AHAAPM
Trigger: CATTGGGGCAGCGTGGGCCAAATTAAAACAAACAAA...TGTGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395514.5
CDS-3UTR CAA 90 bp ACAAACAAGACCGGACAGACAGACAATGCTACTGGCAGTACGATCGGCAACCAATTTGTTTGTTTTAATTaGGCCCACGCTGCCCCAATG +
Preference number: 5 (lower is better)
Translates to: TNKTGQTDNATGSTIGNQFVCFN*AHAAPM
Trigger: CATTGGGGCAGCGTGGGCCAAATTAAAACAAACAAA...TTGGTTGCCGATCGTACTGCCAGTAGCATTGTCTGTCTGTCCGGTCTTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CAA 90 bp GACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCATTTGTTTGTTTTAATTaGGCCCACGCTGCCCCAATG +
Preference number: 5 (lower is better)
Translates to: DPHRPQRKPGPEASSAFSFVCFN*AHAAPM
Trigger: CATTGGGGCAGCGTGGGCCAAATTAAAACAAACAAA...TGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp GACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCAGGAGGAGTTGCGGTTTaGTTTGTTTTAATTTGGCCC +
Preference number: 5 (lower is better)
Translates to: DPHRPQRKPGPEASSAFSGGVAV*FVLIWP
Trigger: GGGCCAAATTAAAACAAACAAAACCGCAACTCCTCC...TGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp ACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTGGAAGCTATGGTTCTGCAGAGGTAATGGGATGAATTaGAAGAGCACTATGTCAACC +
Preference number: 5 (lower is better)
Translates to: TVSSFCARSGAWKLWFCRGNGMN*KSTMST
Trigger: GGTTGACATAGTGCTCTTCAAATTCATCCCATTACC...TCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000543643.6
CDS GCA 90 bp TTGGATCCTCCCGGAACACACCCAACATTGTGCTGGTCACAGTTTTaGTGTTCATTTTCTGTACACCTCGCATTACCATACACATGTGTG +
Preference number: 5 (lower is better)
Translates to: LDPPGTHPTLCWSQF*CSFSVHLALPYTCV
Trigger: CACACATGTGTATGGTAATGCGAGGTGTACAGAAAATGAACAGCAAAACTGTGACCAGCACAATGTTGGGTGTGTTCCGGGAGGATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
CDS GCA 90 bp GCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTaGGTGGAAGCTATGGTTCTGCAGACACTATTAGCAGTTCACTTT +
Preference number: 5 (lower is better)
Translates to: AHNVFHRQFILCSFR*VEAMVLQTLLAVHF
Trigger: AAAGTGAACTGCTAATAGTGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543643.6
CDS-3UTR CAA 90 bp ATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGGATTGCTACAGCAATTaGTTTTGTAAGGCGCTCCTG +
Preference number: 5 (lower is better)
Translates to: IDHKGNRDQKLPVHFHRSDCYSN*FCKALL
Trigger: CAGGAGCGCCTTACAAAACAAATTGCTGTAGCAATC...CGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp CCAGTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACCCATACACATGTGTGTaGCTTCAACCACTACCCCGA +
Preference number: 5 (lower is better)
Translates to: PVHFHRSLVRYALVKTLDPYTCV*LQPLPR
Trigger: TCGGGGTAGTGGTTGAAGCAACACACATGTGTATGG...GTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CAA 90 bp GGACAAGACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCAAGAAGAAGAAACATTTaGAGGCATCTACATGGATCA +
Preference number: 5 (lower is better)
Translates to: GQDPHRPQRKPGPEASSARRRNI*RHLHGS
Trigger: TGATCCATGTAGATGCCTCAAAATGTTTCTTCTTCT...TGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTCTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CAA 90 bp GACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCATTGGTACGATACGCTTaGGTTAAAACGTTGGACACA +
Preference number: 5 (lower is better)
Translates to: DPHRPQRKPGPEASSAFSLVRYA*VKTLDT
Trigger: TGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAA...TGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp GACCCACATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACATTTTCACAGATCGTaGGTACGATACGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: DPHRPQRKPGPEASSAFSHFHRS*VRYALV
Trigger: AACCAAAGCGTATCGTACCAACGATCTGTGAAAATG...TGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTATGTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp AGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTTTTGTTTGTTTTAATTaGGCCCACGCTGCCCCAATG +
Preference number: 5 (lower is better)
Translates to: RPQRKPGPEASSAFSQIVFVCFN*AHAAPM
Trigger: CATTGGGGCAGCGTGGGCCAAATTAAAACAAACAAA...AACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp AGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGTTGGAGGAGTTGCGGTTTaGTTTGTTTTAATTTGGCCC +
Preference number: 5 (lower is better)
Translates to: RPQRKPGPEASSAFSQIVGGVAV*FVLIWP
Trigger: GGGCCAAATTAAAACAAACAAAACCGCAACTCCTCC...AACGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp AGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCGCTGAGGCCAAGGACTaGCTTGTTAGGAAGATAACC +
Preference number: 5 (lower is better)
Translates to: RSLVRYALVKTLDTAHNVAEAKD*LVRKIT
Trigger: GGTTATCTTCCTAACAAGCAAGTCCTTGGCCTCAGC...GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp ATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGGACCATACACATGTGTGTaGCTTCAACCACTACCCCGA +
Preference number: 5 (lower is better)
Translates to: IPSIRSYNEDKTHIDHKGPYTCV*LQPLPR
Trigger: TCGGGGTAGTGGTTGAAGCAACACACATGTGTATGG...TCCTTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CAA 90 bp ATAGACCACAAAGGAAACCGGGACCAGAAGCTTCCAGTGCATTTTCACAGATCGGCTTTGGTTAAAACGTaGGACACAGCTCATAATGTC +
Preference number: 5 (lower is better)
Translates to: IDHKGNRDQKLPVHFHRSALVKT*DTAHNV
Trigger: GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGC...CGATCTGTGAAAATGCACTGGAAGCTTCTGGTCCCGGTTTCCTTTGTGGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp CGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCACATTTTCACAGATCGTaGGTACGATACGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: RWTQLIMSSTVSSFCARSHFHRS*VRYALV
Trigger: AACCAAAGCGTATCGTACCAACGATCTGTGAAAATG...TGAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp ACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCGGTAATGGGATGAATTaGAAGAGCACTATGTCAACC +
Preference number: 5 (lower is better)
Translates to: TLDTAHNVFHRQFILCSFGNGMN*KSTMST
Trigger: GGTTGACATAGTGCTCTTCAAATTCATCCCATTACC...GAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp GCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGACAATCCTCGCAAGTTaGCTGAGGCCAAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: ATASRIKIPIPSIRSYNETILAS*LRPRTC
Trigger: GCAAGTCCTTGGCCTCAGCAAACTTGCGAGGATTGT...CTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp ACGTTGGACACAGCTCATAATGTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCCAGTTCACTTTAATATaGCCACAAAAAGGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: TLDTAHNVFHRQFILCSFQFTLI*PQKGGK
Trigger: CTTGCCACCTTTTTGTGGCAATATTAAAGTGAACTG...GAACGAGCACAGAATGAACTGACGGTGGAAGACATTATGAGCTGTGTCCAACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491895.7
ENST00000543643.6
CDS-3UTR CAA 90 bp AGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACGCTGAGGCCAAGGACTaGCTTGTTAGGAAGATAACC +
Preference number: 5 (lower is better)
Translates to: RIKIPIPSIRSYNEDKTHAEAKD*LVRKIT
Trigger: GGTTATCTTCCTAACAAGCAAGTCCTTGGCCTCAGC...GTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp CCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGATTGCTACAGCAATTaGTTTTGTAAGGCGCTCCTG +
Preference number: 5 (lower is better)
Translates to: PIPSIRSYNEDKTHIDHKDCYSN*FCKALL
Trigger: CAGGAGCGCCTTACAAAACAAATTGCTGTAGCAATC...TTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp CCAGTGCATTTTCACAGATCGTTGGTACGATACGCTTTGGTTAAAACGTTGGACGTGCTGGTCACAGTTTaGCTGTTCATTTTCTGTACA +
Preference number: 5 (lower is better)
Translates to: PVHFHRSLVRYALVKTLDVLVTV*LFIFCT
Trigger: TGTACAGAAAATGAACAGCAAAACTGTGACCAGCAC...GTCCAACGTTTTAACCAAAGCGTATCGTACCAACGATCTGTGAAAATGCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CAA 90 bp TGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTGCTGGTCACAGTTTaGCTGTTCATTTTCTGTACA +
Preference number: 5 (lower is better)
Translates to: WYDTLWLKRWTQLIMSSTVLVTV*LFIFCT
Trigger: TGTACAGAAAATGAACAGCAAAACTGTGACCAGCAC...GGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CAA 90 bp AGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACGGAACACACCCAACATaGTGCTGGTCACAGTTTTGC +
Preference number: 5 (lower is better)
Translates to: RIKIPIPSIRSYNEDKTHGTHPT*CWSQFC
Trigger: GCAAAACTGTGACCAGCACAATGTTGGGTGTGTTCC...GTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395514.5
ENST00000491895.7
CDS-3UTR CAA 90 bp TGGTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCTTGGTACGATACGCTTaGGTTAAAACGTTGGACACA +
Preference number: 5 (lower is better)
Translates to: WYDTLWLKRWTQLIMSSTLVRYA*VKTLDT
Trigger: TGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAA...GGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp GTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTCATTTTCACAGATCGTaGGTACGATACGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: VRYALVKTLDTAHNVFHRHFHRS*VRYALV
Trigger: AACCAAAGCGTATCGTACCAACGATCTGTGAAAATG...ACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp ATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGGAGGAGGAGTTGCGGTTTaGTTTGTTTTAATTTGGCCC +
Preference number: 5 (lower is better)
Translates to: IPSIRSYNEDKTHIDHKGGGVAV*FVLIWP
Trigger: GGGCCAAATTAAAACAAACAAAACCGCAACTCCTCC...TCCTTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp GTACGATACGCTTTGGTTAAAACGTTGGACACAGCTCATAATGTCTTCCACCGTGGTAATGGGATGAATTaGAAGAGCACTATGTCAACC +
Preference number: 5 (lower is better)
Translates to: VRYALVKTLDTAHNVFHRGNGMN*KSTMST
Trigger: GGTTGACATAGTGCTCTTCAAATTCATCCCATTACC...ACGGTGGAAGACATTATGAGCTGTGTCCAACGTTTTAACCAAAGCGTATCGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp AAGGCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGCTGAGGCCAAGGACTaGCTTGTTAGGAAGATAACC +
Preference number: 5 (lower is better)
Translates to: KATASRIKIPIPSIRSYNAEAKD*LVRKIT
Trigger: GGTTATCTTCCTAACAAGCAAGTCCTTGGCCTCAGC...ATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp TCACAGAGCAATACCGCACTAAATATTTTAGCACTTTCGGCACTACACCACTTTGATTGCTACAGCAATTaGTTTTGTAAGGCGCTCCTG +
Preference number: 5 (lower is better)
Translates to: SQSNTALNILALSALHHFDCYSN*FCKALL
Trigger: CAGGAGCGCCTTACAAAACAAATTGCTGTAGCAATC...AAAGTGGTGTAGTGCCGAAAGTGCTAAAATATTTAGTGCGGTATTGCTCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CAA 90 bp ATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAAGGATTGGTACGATACGCTTaGGTTAAAACGTTGGACACA +
Preference number: 5 (lower is better)
Translates to: IPSIRSYNEDKTHIDHKGLVRYA*VKTLDT
Trigger: TGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAA...TCCTTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp GCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGGATTGCTACAGCAATTaGTTTTGTAAGGCGCTCCTG +
Preference number: 5 (lower is better)
Translates to: ASRIKIPIPSIRSYNEDKDCYSN*FCKALL
Trigger: CAGGAGCGCCTTACAAAACAAATTGCTGTAGCAATC...CTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp CCTATACCATCTATACGGAGTTACAATGAGGACAAGACCCACATAGACCACAAACAGTTCACTTTAATATaGCCACAAAAAGGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: PIPSIRSYNEDKTHIDHKQFTLI*PQKGGK
Trigger: CTTGCCACCTTTTTGTGGCAATATTAAAGTGAACTG...TTTGTGGTCTATGTGGGTCTTGTCCTCATTGTAACTCCGTATAGATGGTATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491895.7
ENST00000543643.6
CDS CCA 90 bp CAATATGGACCTTTCCAACAAATGGAACCAAGTGATGCTCACACATaGAAAACATGTCTATGTCCTTCACAATCACCATCTCATCATGAT +
Preference number: 5 (lower is better)
Translates to: QYGPFQQMEPSDAHT*KTCLCPSQSPSHHD
Trigger: ATCATGATGAGATGGTGATTGTGAAGGACATAGACATGTTTTCCATGTGTGAGCATCACTTGGTTCCATTTGTTGGAAAGGTCCATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000395521.6
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp AGGCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGGCTTTGGTTAAAACGTaGGACACAGCTCATAATGTC +
Preference number: 5 (lower is better)
Translates to: RQQLPGLKYLYHLYGVTMALVKT*DTAHNV
Trigger: GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGC...CATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp GCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGTTGGTACGATACGCTTaGGTTAAAACGTTGGACACA +
Preference number: 5 (lower is better)
Translates to: ATASRIKIPIPSIRSYNELVRYA*VKTLDT
Trigger: TGTGTCCAACGTTTTAACCAAAGCGTATCGTACCAA...CTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp CGCACTAAATATTTTAGCACTTTCGGCACTACACCACTTTTATTGGAGGAAGAACATTTTCACAGATCGTaGGTACGATACGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: RTKYFSTFGTTPLLLEEEHFHRS*VRYALV
Trigger: AACCAAAGCGTATCGTACCAACGATCTGTGAAAATG...TTCTTCCTCCAATAAAAGTGGTGTAGTGCCGAAAGTGCTAAAATATTTAGTGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491895.7
CDS-3UTR CAA 90 bp GCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGGTAATGGGATGAATTaGAAGAGCACTATGTCAACC +
Preference number: 5 (lower is better)
Translates to: ATASRIKIPIPSIRSYNEGNGMN*KSTMST
Trigger: GGTTGACATAGTGCTCTTCAAATTCATCCCATTACC...CTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp GCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGAGGACAAGATTTATTTGACTTCGTaGCTTCAACCACTACCCCGA +
Preference number: 5 (lower is better)
Translates to: ASRIKIPIPSIRSYNEDKIYLTS*LQPLPR
Trigger: TCGGGGTAGTGGTTGAAGCAACGAAGTCAAATAAAT...CTTGTCCTCATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543643.6
CDS TCA 90 bp CACATGGAAAACATGTCTATGTCCTTCACAATCACCATCTCATCATaGTCTTCATCAAATATAGCATCGTTTAGGACATCTGAGATGGTC +
Preference number: 5 (lower is better)
Translates to: HMENMSMSFTITISS*SSSNIASFRTSEMV
Trigger: GACCATCTCAGATGTCCTAAACGATGCTATATTTGATGAAGATCATGATGAGATGGTGATTGTGAAGGACATAGACATGTTTTCCATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000395521.6
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS-3UTR CAA 90 bp AAGGCAACAGCTTCCAGGATTAAAATACCTATACCATCTATACGGAGTTACAATGCTTTGGTTAAAACGTaGGACACAGCTCATAATGTC +
Preference number: 5 (lower is better)
Translates to: KATASRIKIPIPSIRSYNALVKT*DTAHNV
Trigger: GACATTATGAGCTGTGTCCAACGTTTTAACCAAAGC...ATTGTAACTCCGTATAGATGGTATAGGTATTTTAATCCTGGAAGCTGTTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CAA 90 bp GGCCTGCTGGGCCCGGGCCGCGGCGGATCCCGCTCGGGGAACCCATaGCTGCACCTGGCGCCCCGCGGCTTCTCCGCCGGTGCCCGCACA +
Preference number: 6 (lower is better)
Translates to: GLLGPGRGGSRSGNP*LHLAPRGFSAGART
Trigger: TGTGCGGGCACCGGCGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCGGGATCCGCCGCGGCCCGGGCCCAGCAGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS GCA 72 bp CGGGCCGCGGCGGATCCCGCTCGGGGAACCCATTGCTaGACCTGGCGCCCCGCGGCTTCTCCGCCGGTGCCC +
Preference number: 6 (lower is better)
Translates to: RAAADPARGTHC*TWRPAASPPVP
Trigger: GGGCACCGGCGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCGGGATCCGCCGCGGCCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS GCA 72 bp GCCCGGGCCGCGGCGGATCCCGCTCGGGGAACCCATTaGTGCACCTGGCGCCCCGCGGCTTCTCCGCCGGTG +
Preference number: 6 (lower is better)
Translates to: ARAAADPARGTH*CTWRPAASPPV
Trigger: CACCGGCGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCGGGATCCGCCGCGGCCCGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CAA 72 bp GGCCCGGGCCGCGGCGGATCCCGCTCGGGGAACCCATaGCTGCACCTGGCGCCCCGCGGCTTCTCCGCCGGT +
Preference number: 6 (lower is better)
Translates to: GPGRGGSRSGNP*LHLAPRGFSAG
Trigger: ACCGGCGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCGGGATCCGCCGCGGCCCGGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CCA 72 bp GCGGCGGATCCCGCTCGGGGAACCCATTGCTGCACCTaGCGCCCCGCGGCTTCTCCGCCGGTGCCCGCACAG +
Preference number: 6 (lower is better)
Translates to: AADPARGTHCCT*RPAASPPVPAQ
Trigger: CTGTGCGGGCACCGGCGGAGAAGCCGCGGGGCGCCAGGTGCAGCAATGGGTTCCCCGAGCGGGATCCGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS GCA 72 bp GCACAGGGCCCTTCTCCATGGACCCGCCGCAGCCGCTaGCGTTCGGGAAGGACCCCGGGGCGCTTCGAGGTC +
Preference number: 6 (lower is better)
Translates to: AQGPSPWTRRSR*RSGRTPGRFEV
Trigger: GACCTCGAAGCGCCCCGGGGTCCTTCCCGAACGGCAGCGGCTGCGGCGGGTCCATGGAGAAGGGCCCTGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS GCA 72 bp ATTGCTGCACCTGGCGCCCCGCGGCTTCTCCGCCGGTaGCCGCACAGGGCCCTTCTCCATGGACCCGCCGCA +
Preference number: 6 (lower is better)
Translates to: IAAPGAPRLLRR*PHRALLHGPAA
Trigger: TGCGGCGGGTCCATGGAGAAGGGCCCTGTGCGGGCACCGGCGGAGAAGCCGCGGGGCGCCAGGTGCAGCAAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS GCA 72 bp GCCGAGGCCGCCCTCCAGGGCGTCTTGAGCAGCCCTTaGCGCTGGGGGTTCTCGCCCAGCGAGCTCAGGATG +
Preference number: 6 (lower is better)
Translates to: AEAALQGVLSSP*RWGFSPSELRM
Trigger: CATCCTGAGCTCGCTGGGCGAGAACCCCCAGCGGCAAGGGCTGCTCAAGACGCCCTGGAGGGCGGCCTCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000395521.6
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CAA 72 bp GGCCGAGGCCGCCCTCCAGGGCGTCTTGAGCAGCCCTaGCCGCTGGGGGTTCTCGCCCAGCGAGCTCAGGAT +
Preference number: 6 (lower is better)
Translates to: GRGRPPGRLEQP*PLGVLAQRAQD
Trigger: ATCCTGAGCTCGCTGGGCGAGAACCCCCAGCGGCAAGGGCTGCTCAAGACGCCCTGGAGGGCGGCCTCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000395521.6
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CCA 72 bp CGGGGCGCTTCGAGGTCTGCGGCTAAACTCCGCCGGTaGCCGCGGACAATGGGCTGTGGCCGGAGTCACCTG +
Preference number: 6 (lower is better)
Translates to: RGASRSAAKLRR*PRTMGCGRSHL
Trigger: CAGGTGACTCCGGCCACAGCCCATTGTCCGCGGCCACCGGCGGAGTTTAGCCGCAGACCTCGAAGCGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CAA 90 bp CCCTTGGTGAAGAACTGCATGGCCGAGGCCGCCCTCCAGGGCGTCTaGAGCAGCCCTTGCCGCTGGGGGTTCTCGCCCAGCGAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: PLVKNCMAEAALQGV*SSPCRWGFSPSELR
Trigger: CCTGAGCTCGCTGGGCGAGAACCCCCAGCGGCAAGGGCTGCTCAAGACGCCCTGGAGGGCGGCCTCGGCCATGCAGTTCTTCACCAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000395521.6
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CAA 72 bp AAGAACTGCATGGCCGAGGCCGCCCTCCAGGGCGTCTaGAGCAGCCCTTGCCGCTGGGGGTTCTCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: KNCMAEAALQGV*SSPCRWGFSPS
Trigger: GCTGGGCGAGAACCCCCAGCGGCAAGGGCTGCTCAAGACGCCCTGGAGGGCGGCCTCGGCCATGCAGTTCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000395521.6
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CAA 90 bp GAACTGCATGGCCGAGGCCGCCCTCCAGGGCGTCTTGAGCAGCCCTaGCCGCTGGGGGTTCTCGCCCAGCGAGCTCAGGATGGACGAGTA +
Preference number: 6 (lower is better)
Translates to: ELHGRGRPPGRLEQP*PLGVLAQRAQDGRV
Trigger: TACTCGTCCATCCTGAGCTCGCTGGGCGAGAACCCCCAGCGGCAAGGGCTGCTCAAGACGCCCTGGAGGGCGGCCTCGGCCATGCAGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000395521.6
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS TCA 72 bp GGTGGCCGCGGACAATGGGCTGTGGCCGGAGTCACCTaGGGAAGGTACGCAACCTGCTTAGATCACACTCCG +
Preference number: 6 (lower is better)
Translates to: GGRGQWAVAGVT*GRYATCLDHTP
Trigger: CGGAGTGTGATCTAAGCAGGTTGCGTACCTTCCTCAGGTGACTCCGGCCACAGCCCATTGTCCGCGGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS GCA 72 bp CTCGCCCAGCGAGCTCAGGATGGACGAGTAGGCGGCTaGCAGGTTAGGGAGGTTCAGCTCGTTATCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LAQRAQDGRVGG*QVREVQLVILL
Trigger: GAGGAGGATAACGAGCTGAACCTCCCTAACCTGGCAGCCGCCTACTCGTCCATCCTGAGCTCGCTGGGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS GCA 72 bp TACCCCGACTCCAGCAGGCCGCAAGGCTTCCGTGATTaGTACAGCAATTTGTTTTGTAAGGCGCTCCTGAAC +
Preference number: 6 (lower is better)
Translates to: YPDSSRPQGFRD*YSNLFCKALLN
Trigger: GTTCAGGAGCGCCTTACAAAACAAATTGCTGTAGCAATCACGGAAGCCTTGCGGCCTGCTGGAGTCGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CCA 72 bp GCTCCTAATGAGAGTCAGGAACTCTTCCCGAGTCTTTaGATCCTCCCGGAACACACCCAACATTGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: APNESQELFPSL*ILPEHTQHCAG
Trigger: ACCAGCACAATGTTGGGTGTGTTCCGGGAGGATCCAAAGACTCGGGAAGAGTTCCTGACTCTCATTAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
CDS CCA 72 bp TCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTaGAAGCTATGGTTCTGCAGACCTCGCAAGTTTGCT +
Preference number: 6 (lower is better)
Translates to: STVSSFCARSGA*KLWFCRPRKFA
Trigger: AGCAAACTTGCGAGGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395521.6
CDS CCA 72 bp TCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTGCGTaGAAGCTATGGTTCTGCAGACGTTGCTTCAACCAC +
Preference number: 6 (lower is better)
Translates to: STVSSFCARSGA*KLWFCRRCFNH
Trigger: GTGGTTGAAGCAACGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536224.2
CDS GCA 72 bp GTCTTCCACCGTCAGTTCATTCTGTGCTCGTTCAGGTaGGTGGAAGCTATGGTTCTGCAGACGTTGCTTCAA +
Preference number: 6 (lower is better)
Translates to: VFHRQFILCSFR*VEAMVLQTLLQ
Trigger: TTGAAGCAACGTCTGCAGAACCATAGCTTCCACGCACCTGAACGAGCACAGAATGAACTGACGGTGGAAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536224.2
CDS CAA 90 bp GGAACTCTTCCCGAGTCTTTGGATCCTCCCGGAACACACCCAACATaGTGCTGGTCACAGTTTTGCTGTTCATTTTCTGTACACCTCGCA +
Preference number: 6 (lower is better)
Translates to: GTLPESLDPPGTHPT*CWSQFCCSFSVHLA
Trigger: TGCGAGGTGTACAGAAAATGAACAGCAAAACTGTGACCAGCACAATGTTGGGTGTGTTCCGGGAGGATCCAAAGACTCGGGAAGAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
CDS GCA 72 bp CCCGGAACACACCCAACATTGTGCTGGTCACAGTTTTaGTGTTCATTTTCTGTACACCTCGCATTACCATAC +
Preference number: 6 (lower is better)
Translates to: PGTHPTLCWSQF*CSFSVHLALPY
Trigger: GTATGGTAATGCGAGGTGTACAGAAAATGAACAGCAAAACTGTGACCAGCACAATGTTGGGTGTGTTCCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
CDS GCA 72 bp GAGTCTTTGGATCCTCCCGGAACACACCCAACATTGTaGTGGTCACAGTTTTGCTGTTCATTTTCTGTACAC +
Preference number: 6 (lower is better)
Translates to: ESLDPPGTHPTL*WSQFCCSFSVH
Trigger: GTGTACAGAAAATGAACAGCAAAACTGTGACCAGCACAATGTTGGGTGTGTTCCGGGAGGATCCAAAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
CDS CCA 72 bp TCTTTGGATCCTCCCGGAACACACCCAACATTGTGCTaGTCACAGTTTTGCTGTTCATTTTCTGTACACCTC +
Preference number: 6 (lower is better)
Translates to: SLDPPGTHPTLC*SQFCCSFSVHL
Trigger: GAGGTGTACAGAAAATGAACAGCAAAACTGTGACCAGCACAATGTTGGGTGTGTTCCGGGAGGATCCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
CDS CAA 72 bp TTCTGCAGACCTCGCAAGTTTGCTGAGGCCAAGGACTaGCTTGTTAGGAAGATAACCAATATGGACCTTTCC +
Preference number: 6 (lower is better)
Translates to: FCRPRKFAEAKD*LVRKITNMDLS
Trigger: GGAAAGGTCCATATTGGTTATCTTCCTAACAAGCAAGTCCTTGGCCTCAGCAAACTTGCGAGGTCTGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395521.6
CDS CAA 90 bp TTTGGATCCTCCCGGAACACACCCAACATTGTGCTGGTCACAGTTTaGCTGTTCATTTTCTGTACACCTCGCATTACCATACACATGTGT +
Preference number: 6 (lower is better)
Translates to: FGSSRNTPNIVLVTV*LFIFCTPRITIHMC
Trigger: ACACATGTGTATGGTAATGCGAGGTGTACAGAAAATGAACAGCAAAACTGTGACCAGCACAATGTTGGGTGTGTTCCGGGAGGATCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
CDS CAA 72 bp TCCCGGAACACACCCAACATTGTGCTGGTCACAGTTTaGCTGTTCATTTTCTGTACACCTCGCATTACCATA +
Preference number: 6 (lower is better)
Translates to: SRNTPNIVLVTV*LFIFCTPRITI
Trigger: TATGGTAATGCGAGGTGTACAGAAAATGAACAGCAAAACTGTGACCAGCACAATGTTGGGTGTGTTCCGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
CDS CAA 72 bp TTCTACAATCCTCGCAAGTTTGCTGAGGCCAAGGACTaGCTTGTTAGGAAGATAACCAATATGGACCTTTCC +
Preference number: 6 (lower is better)
Translates to: FYNPRKFAEAKD*LVRKITNMDLS
Trigger: GGAAAGGTCCATATTGGTTATCTTCCTAACAAGCAAGTCCTTGGCCTCAGCAAACTTGCGAGGATTGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CCA 72 bp CCTTTCCAACAAATGGAACCAAGTGATGCTCACACATaGAAAACATGTCTATGTCCTTCACAATCACCATCT +
Preference number: 6 (lower is better)
Translates to: PFQQMEPSDAHT*KTCLCPSQSPS
Trigger: AGATGGTGATTGTGAAGGACATAGACATGTTTTCCATGTGTGAGCATCACTTGGTTCCATTTGTTGGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000395521.6
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS CAA 90 bp ACTATAGATTTCTACAATCCTCGCAAGTTTGCTGAGGCCAAGGACTaGCTTGTTAGGAAGATAACCAATATGGACCTTTCCAACAAATGG +
Preference number: 6 (lower is better)
Translates to: TIDFYNPRKFAEAKD*LVRKITNMDLSNKW
Trigger: CCATTTGTTGGAAAGGTCCATATTGGTTATCTTCCTAACAAGCAAGTCCTTGGCCTCAGCAAACTTGCGAGGATTGTAGAAATCTATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6
CDS TCA 72 bp AACATGTCTATGTCCTTCACAATCACCATCTCATCATaGTCTTCATCAAATATAGCATCGTTTAGGACATCT +
Preference number: 6 (lower is better)
Translates to: NMSMSFTITISS*SSSNIASFRTS
Trigger: AGATGTCCTAAACGATGCTATATTTGATGAAGATCATGATGAGATGGTGATTGTGAAGGACATAGACATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254299.8
ENST00000395514.5
ENST00000395521.6
ENST00000491895.7
ENST00000536224.2
ENST00000543643.6