RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GCGR (Homo sapiens)

Ensembl gene IDs: ENSG00000215644

Ensembl transcript IDs: ENST00000400723.8, ENST00000570996.5, ENST00000571425.1, ENST00000572185.1, ENST00000573428.1, ENST00000574283.2, ENST00000671708.1, ENST00000671794.1, ENST00000672343.1, ENST00000672485.1, ENST00000672538.1, ENST00000673258.1

Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTaGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCC +
Preference number: 1 (lower is better)
Translates to: GHFHAHGTCRHTWGH*HAVHGTAPTPALDS
Trigger: GGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR CCA 90 bp ATTGTTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTaGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCC +
Preference number: 1 (lower is better)
Translates to: IVGGHFHAHGTCRHT*GHWHAVHGTAPTPA
Trigger: GGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAACAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR-3UTR CCA 90 bp ACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCAGCGACGCCCTCTaGGTGCCAGAGTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: TWGHWHAVHGTAPTPALDSSDAL*VPESSP
Trigger: AGGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGA...GTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR-3UTR CCA 90 bp ACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTGCCCCCAGCCTCAGCTaGGCGTCCAGTTCTGGGTTG +
Preference number: 2 (lower is better)
Translates to: TCRHTWGHWHAVHGTAPTAPSLS*ASSSGL
Trigger: CAACCCAGAACTGGACGCCCAGCTGAGGCTGGGGGC...AGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR-3UTR GCA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGGCGACGCCCTCTGGGTaGCAGAGTCCAGCCCTAGCT +
Preference number: 2 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRATPSG*QSPALA
Trigger: AGCTAGGGCTGGACTCTGGCACCCAGAGGGCGTCGC...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR-3UTR GCA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGCGACGCCCTCTGGGTaGCAGAGTCCAGCCCTAGCT +
Preference number: 2 (lower is better)
Translates to: RDKAGAGRGGPISQTATLATPSG*QSPALA
Trigger: AGCTAGGGCTGGACTCTGGCACCCAGAGGGCGTCGC...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR-3UTR CCA 90 bp ACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCCAGCGACGCCCTCTaGGTGCCAGAGTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: TFPCTWDVPTYVGTLARSSSDAL*VPESSP
Trigger: AGGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGA...ACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR-3UTR CCA 90 bp GGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACCTGGGCGTCCAGTTCTaGGTTGTCCAGCGACGCCCT +
Preference number: 2 (lower is better)
Translates to: GGHFHAHGTCRHTWGHWHLGVQF*VVQRRP
Trigger: AGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAG...GTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR-3UTR CCA 90 bp TTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCCTGGGCGTCCAGTTCTaGGTTGTCCAGCGACGCCCT +
Preference number: 2 (lower is better)
Translates to: LEDISMHMGRADIRGDTGLGVQF*VVQRRP
Trigger: AGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAG...GCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR CCA 72 bp TGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTaGGTGCCAGAGTCCAGCCCTAGCTGGGGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: WASSSGLSSDAL*VPESSPSWGPS
Trigger: GCTGGGACCCCAGCTAGGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR CCA 72 bp CATGCACATGGGACGTGCCGACATACGTGGGGACACTaGCACGCAGTTCACGGCACAGCCCCCACTCCCGCC +
Preference number: 3 (lower is better)
Translates to: HAHGTCRHTWGH*HAVHGTAPTPA
Trigger: GGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR-3UTR CAA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGGCGTCCAGTTCTGGGTaGTCCAGCGACGCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRASSSG*SSDALW
Trigger: CCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGC...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR-3UTR CAA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGCGTCCAGTTCTGGGTaGTCCAGCGACGCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: RDKAGAGRGGPISQTATLASSSG*SSDALW
Trigger: CCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGC...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
3UTR GCA 72 bp TTTATTGTTGGAGGACATTTCCATGCACATGGGACGTaGCGACATACGTGGGGACACTGGCACGCAGTTCAC +
Preference number: 3 (lower is better)
Translates to: FIVGGHFHAHGT*RHTWGHWHAVH
Trigger: GTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAACAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTCGCTCGGGGGTCGGCTTaGCTCCCCGCCGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GTLARSSRHSPHSRPGLLARGSA*LPAVLW
Trigger: CCAGAGGACGGCGGGGAGCCAAGCCGACCCCCGAGC...GAGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp ACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACCTGAAGCTGCCCCTCTaGGCCTCAGGGTCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: TWGHWHAVHGTAPTPALDLKLPL*ASGSAR
Trigger: CCGCGCGGACCCTGAGGCTCAGAGGGGCAGCTTCAG...GTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTCTGCTCACCTGCATCACGCCAAGGCTaGCCCCGGGGTCCACGCACC +
Preference number: 4 (lower is better)
Translates to: ARSSRHSPHSRPGLLCSPASRQG*PRGPRT
Trigger: GGTGCGTGGACCCCGGGGGCAGCCTTGGCGTGATGC...AGGTGAGCAGAGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp ACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACGAGGGGACCTGTGGCTaGCAGGCCAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TWGHWHAVHGTAPTPALDEGTCG*QASSSS
Trigger: GCTGCTGCTGCTGGCCTGCCAGCCACAGGTCCCCTC...GTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp ACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACAGCGGAGGGGACCTGTaGCTGGCAGGCCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TWGHWHAVHGTAPTPALDSGGDL*LAGQQQ
Trigger: CTGCTGCTGGCCTGCCAGCCACAGGTCCCCTCCGCT...GTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTTTGCTGGGAGGGCCGTaGCCGGGCGAAGATGAGGCC +
Preference number: 4 (lower is better)
Translates to: GDTGTQFTAQPPLPPWTPLLGGP*PGEDEA
Trigger: GGCCTCATCTTCGCCCGGCCACGGCCCTCCCAGCAA...AGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp GGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTGGGGGTCTCCGCAGATaGATCCTGGCTGCCACCACC +
Preference number: 4 (lower is better)
Translates to: GDTGTQFTAQPPLPPWTPGGLRR*ILAATT
Trigger: GGTGGTGGCAGCCAGGATTCATCTGCGGAGACCCCC...AGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTGTGGTGCATCTGCCGTaGCCGCAGCTTGGCCACGAG +
Preference number: 4 (lower is better)
Translates to: GDTGTQFTAQPPLPPWTPVVHLP*PQLGHE
Trigger: CTCGTGGCCAAGCTGCGGGCACGGCAGATGCACCAC...AGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGGTGGGGAGGGTGCCCTGGGCGTaGTCGTCCGTCACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: AGAGRGGPISQTATLGVGRVPWA*SSVTKA
Trigger: CGCCTTCGTGACGGACGAGCACGCCCAGGGCACCCT...CCCCACCCCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp ACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTGCTCGGGGGTCGGCTTaGCTCCCCGCCGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TCRHTWGHWHAVHGTAPTARGSA*LPAVLW
Trigger: CCAGAGGACGGCGGGGAGCCAAGCCGACCCCCGAGC...AGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp ACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACGCTGCCTCCCACATCTaGCAGGGGCTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TWGHWHAVHGTAPTPALDAASHI*QGLHSW
Trigger: CCAGCTGTGCAGCCCCTGCCAGATGTGGGAGGCAGC...GTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp ACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTGCACACCAGCTCCGTaGGAGGGGGCAGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: TWGHWHAVHGTAPTPALDCTPAP*EGAAGS
Trigger: TGAGCCTGCTGCCCCCTCCCACGGAGCTGGTGTGCA...GTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTGCCGTGCCCGCAGCTTaGCCACGAGCAGCTGAACGA +
Preference number: 4 (lower is better)
Translates to: GDTGTQFTAQPPLPPWTPAVPAA*PRAAER
Trigger: TCGTTCAGCTGCTCGTGGCCAAGCTGCGGGCACGGC...AGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGGTGGGGTTGCTGGGAGGGCCGTaGCCGGGCGAAGATGAGGCC +
Preference number: 4 (lower is better)
Translates to: AGAGRGGPISQTATLGVGLLGGP*PGEDEA
Trigger: GGCCTCATCTTCGCCCGGCCACGGCCCTCCCAGCAA...CCCCACCCCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTTCCAGCGACGCCCTCTaGGTGCCAGAGTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GDTGTQFTAQPPLPPWTPSSDAL*VPESSP
Trigger: AGGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGA...AGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp GGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGCTGAAGCTGCCCCTCTaGGCCTCAGGGTCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: GQGRCRERRPNLADSHTGLKLPL*ASGSAR
Trigger: CCGCGCGGACCCTGAGGCTCAGAGGGGCAGCTTCAG...CCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp CCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCGTGGCCGGGCGAAGATaGGGCCCTGTGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTYVGTLARSSRHSPHSRVAGRR*GPVVAG
Trigger: ACCAGCAACCACAGGGCCTCATCTTCGCCCGGCCAC...GCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp CCAGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCGTGGTGCATCTGCCGTaGCCGCAGCTTGGCCACGAG +
Preference number: 4 (lower is better)
Translates to: PASAGRPVLGCPATPSGCVVHLP*PQLGHE
Trigger: CTCGTGGCCAAGCTGCGGGCACGGCAGATGCACCAC...GCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp CCAGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCCTCCCATAGCACTTTaGCCAGGCGCCAGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: PASAGRPVLGCPATPSGCPPIAL*PGASGA
Trigger: GGCACCGCTGGCGCCTGGGCAAAGTGCTATGGGAGG...GCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCTGAGGGGACCTGTGGCTaGCAGGCCAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASSSGLSSDALWVPESSPEGTCG*QASSSS
Trigger: GCTGCTGCTGCTGGCCTGCCAGCCACAGGTCCCCTC...AGGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CCAGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCTGTTGGCCGTGGTATTaGCGGGGGTGTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PASAGRPVLGCPATPSGCCWPWY*RGCPAS
Trigger: GCTGGCCGGACACCCCCGCCAATACCACGGCCAACA...GCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp ATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGGCCCCCAGCCTCAGCTaGGCGTCCAGTTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: IRGDTGTQFTAQPPLPPWAPSLS*ASSSGL
Trigger: CAACCCAGAACTGGACGCCCAGCTGAGGCTGGGGGC...CCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp GCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGGTGGGGAGGAAGTCCATCACCTaGGCGGAGGGGACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AGAGRGGPISQTATLGVGRKSIT*AEGTCG
Trigger: GCCACAGGTCCCCTCCGCTCAGGTGATGGACTTCCT...CCCCACCCCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp CGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCGTGGCCGGGCGAAGATaGGGCCCTGTGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RADIRGDTGTQFTAQPPLVAGRR*GPVVAG
Trigger: ACCAGCAACCACAGGGCCTCATCTTCGCCCGGCCAC...GAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp CCAGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCTCTGGGCAGCTAGCTaGCTCCCACATCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PASAGRPVLGCPATPSGCLWAAS*LPHLAG
Trigger: CCCTGCCAGATGTGGGAGGCAGCTAGCTGCCCAGAG...GCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCTCTGTGTGGTGCATCTaGCGTGCCCGCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GVQFWVVQRRPLGARVQPSVWCI*RARSLA
Trigger: GGCCAAGCTGCGGGCACGGCAGATGCACCACACAGA...GGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp CGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCTCCCATAGCACTTTaGCCAGGCGCCAGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: RADIRGDTGTQFTAQPPLPPIAL*PGASGA
Trigger: GGCACCGCTGGCGCCTGGGCAAAGTGCTATGGGAGG...GAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp CAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAAACTGCAGCTCCTTaGTGGGAGGGCCGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: QLGVQFWVVQRRPLGARVQTAAP*WEGRGR
Trigger: CCGGCCACGGCCCTCCCAGCAAGGAGCTGCAGTTTG...GACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp ATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGCCACCCCTCCCAAACTaGAGCTCCTTGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: IRGDTGTQFTAQPPLPPWPPLPN*SSLLGG
Trigger: CCCTCCCAGCAAGGAGCTGCAGTTTGGGAGGGGTGG...CCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGAGCCTGGGGCGTCCTaGCCAGTGGGGTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RDKAGAGRGGPISQTATLEPGAS*PVGCPP
Trigger: GGGAGGACACCCCACTGGCCAGGACGCCCCAGGCTC...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCAGGGGCAGGAGATGTTaGCCGTGGTATTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GVQFWVVQRRPLGARVQPRGRRC*PWYWRG
Trigger: CCCCCGCCAATACCACGGCCAACATCTCCTGCCCCT...GGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp AGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCATCCTCTCGGGGAGGGTaGCCAGGCCCAGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SLSWASSSGLSSDALWVPSSRGG*PGPAGC
Trigger: ACAACCTGCTGGGCCTGGCCACCCTCCCCGAGAGGA...TGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCTCCTCTCGGGGAGGGTaGCCAGGCCCAGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: QLGVQFWVVQRRPLGARVSSRGG*PGPAGC
Trigger: ACAACCTGCTGGGCCTGGCCACCCTCCCCGAGAGGA...GACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTCGCGAAGACCACTTCGTaGACGCCCAGCAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: GTLARSSRHSPHSRPGLLAKTTS*TPSRGM
Trigger: CATCCCTCTGCTGGGCGTCCACGAAGTGGTCTTCGC...GAGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCCTGGGCGTCCAGTTCTaGGTTGTCCAGCGACGCCCT +
Preference number: 4 (lower is better)
Translates to: GVQFWVVQRRPLGARVQPLGVQF*VVQRRP
Trigger: AGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAG...GGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp AGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAAGGAAGTCCATCACCTaGGCGGAGGGGACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLSWASSSGLSSDALWVPRKSIT*AEGTCG
Trigger: GCCACAGGTCCCCTCCGCTCAGGTGATGGACTTCCT...TGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp GCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGGTGGGGCGATGCCATATTGCATaGACACCGCGGCCACACGGC +
Preference number: 4 (lower is better)
Translates to: AGAGRGGPISQTATLGVGRCHIA*TPRPHG
Trigger: GCCGTGTGGCCGCGGTGTTCATGCAATATGGCATCG...CCCCACCCCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp CCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCTGCCCAGGTAGAGGCTaGAGAAGCTCCTCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: PTYVGTLARSSRHSPHSRCPGRG*RSSSRG
Trigger: TCCCCGAGAGGAGCTTCTTCAGCCTCTACCTGGGCA...GCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp ATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGTCGCGTGGATGGCATTaGGGGTGCAGTGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: IRGDTGTQFTAQPPLPPWSRGWH*GCSAAC
Trigger: GCAAGCTGCACTGCACCCGCAATGCCATCCACGCGA...CCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGGTGGGGATGAGGCCCTGTGGTTaGTGGTGTTCCGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: AGAGRGGPISQTATLGVGMRPCG*WCSAPP
Trigger: GGGAGGAGCGGAACACCAGCAACCACAGGGCCTCAT...CCCCACCCCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGAGCGGAGGGGACCTGTaGCTGGCAGGCCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRSGGDL*LAGQQQ
Trigger: CTGCTGCTGGCCTGCCAGCCACAGGTCCCCTCCGCT...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTGGGTCAGCGTGGACTTaGCCAGCCGGAACTTGTAGT +
Preference number: 4 (lower is better)
Translates to: GDTGTQFTAQPPLPPWTPGSAWT*PAGTCS
Trigger: ACTACAAGTTCCGGCTGGCCAAGTCCACGCTGACCC...AGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp ATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGGCGAAGACCACTTCGTaGACGCCCAGCAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: IRGDTGTQFTAQPPLPPWAKTTS*TPSRGM
Trigger: CATCCCTCTGCTGGGCGTCCACGAAGTGGTCTTCGC...CCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp AGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGCCACCAGCAGGCCCTaGAAGGAGCTGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SLSWASSSGLSSDALWVPATSRP*KELRKR
Trigger: CCTCTTCCTCAGCTCCTTCCAGGGCCTGCTGGTGGC...TGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCGAGTCCAGCCCTAGCTaGGGTCCCAGCAGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: QLGVQFWVVQRRPLGARVESSPS*GPSRVQ
Trigger: CTGAACCCTGCTGGGACCCCAGCTAGGGCTGGACTC...GACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp CGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCTGCCCAGGTAGAGGCTaGAGAAGCTCCTCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: RADIRGDTGTQFTAQPPLCPGRG*RSSSRG
Trigger: TCCCCGAGAGGAGCTTCTTCAGCCTCTACCTGGGCA...GAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp CCAGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCTCTCGAACAGACACTTaGCCACTGCCCAGGGGACGA +
Preference number: 4 (lower is better)
Translates to: PASAGRPVLGCPATPSGCSRTDT*PLPRGR
Trigger: TCGTCCCCTGGGCAGTGGTCAAGTGTCTGTTCGAGA...GCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp ATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGTCTCGAACAGACACTTaGCCACTGCCCAGGGGACGA +
Preference number: 4 (lower is better)
Translates to: IRGDTGTQFTAQPPLPPWSRTDT*PLPRGR
Trigger: TCGTCCCCTGGGCAGTGGTCAAGTGTCTGTTCGAGA...CCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp CCAGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCGGCCCTGGAAGGAGCTaGGGAAGAGGTCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PASAGRPVLGCPATPSGCGPGRS*GRGRRR
Trigger: TCTTCTTCGACCTCTTCCTCAGCTCCTTCCAGGGCC...GCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGCTCTGGGCAGCTAGCTaGCTCCCACATCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GQGRCRERRPNLADSHTGLWAAS*LPHLAG
Trigger: CCCTGCCAGATGTGGGAGGCAGCTAGCTGCCCAGAG...CCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTCTGTCGAAGGTTCTGTTaGACACCAGCTCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GTLARSSRHSPHSRPGLLCRRFC*TPAPWE
Trigger: CTCCCACGGAGCTGGTGTGCAACAGAACCTTCGACA...GAGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp CAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCTCGCGTGGATGGCATTaGGGGTGCAGTGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: QLGVQFWVVQRRPLGARVSRGWH*GCSAAC
Trigger: GCAAGCTGCACTGCACCCGCAATGCCATCCACGCGA...GACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp ACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACGCCACGATGCCATATTaGATGAACACCGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: TWGHWHAVHGTAPTPALDATMPY*MNTAAT
Trigger: TGTGGCCGCGGTGTTCATGCAATATGGCATCGTGGC...GTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp ACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACCAGATGAATCCTGGCTaGCACCACCCCTCCCAAACT +
Preference number: 4 (lower is better)
Translates to: TWGHWHAVHGTAPTPALDQMNPG*HHPSQT
Trigger: AGTTTGGGAGGGGTGGTGGCAGCCAGGATTCATCTG...GTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTCTGCTCACCTCATGCACATGGGACGTaGCGACATACGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: ARSSRHSPHSRPGLLCSPHAHGT*RHTWGH
Trigger: GTGTCCCCACGTATGTCGGCACGTCCCATGTGCATG...AGGTGAGCAGAGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGGTCGAAGAAGAGCTTaGCGGAGCGCAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: GQGRCRERRPNLADSHTGGRRRA*RSAGCP
Trigger: AGGGCACCCTGCGCTCCGCCAAGCTCTTCTTCGACC...CCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGCCACCAGCAGGCCCTaGAAGGAGCTGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GQGRCRERRPNLADSHTGATSRP*KELRKR
Trigger: CCTCTTCCTCAGCTCCTTCCAGGGCCTGCTGGTGGC...CCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCGAAGATGAGGCCCTGTaGTTGCTGGTGTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PTYVGTLARSSRHSPHSREDEAL*LLVFRS
Trigger: GGAGCGGAACACCAGCAACCACAGGGCCTCATCTTC...GCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCTCCGCAGATGAATCCTaGCTGCCACCACCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QLGVQFWVVQRRPLGARVSADES*LPPPLP
Trigger: TGGGAGGGGTGGTGGCAGCCAGGATTCATCTGCGGA...GACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp ATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGCATACGTGGGGACACTaGCACGCAGTTCACGGCACA +
Preference number: 4 (lower is better)
Translates to: IRGDTGTQFTAQPPLPPWHTWGH*HAVHGT
Trigger: TGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATG...CCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp CAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCTTGGCCACGAGCAGCTaGACGATGCGGACGAAGATG +
Preference number: 4 (lower is better)
Translates to: QLGVQFWVVQRRPLGARVLATSS*TMRTKM
Trigger: CATCTTCGTCCGCATCGTTCAGCTGCTCGTGGCCAA...GACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTCTGCTCACCTTGTCGAAGGTTCTGTTaGACACCAGCTCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ARSSRHSPHSRPGLLCSPCRRFC*TPAPWE
Trigger: CTCCCACGGAGCTGGTGTGCAACAGAACCTTCGACA...AGGTGAGCAGAGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp ACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTGCATCACGCCAAGGCTaGCCCCGGGGTCCACGCACC +
Preference number: 4 (lower is better)
Translates to: TFPCTWDVPTYVGTLARSASRQG*PRGPRT
Trigger: GGTGCGTGGACCCCGGGGGCAGCCTTGGCGTGATGC...ACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGGTGGGGGCCACGATGCCATATTaGATGAACACCGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: AGAGRGGPISQTATLGVGATMPY*MNTAAT
Trigger: TGTGGCCGCGGTGTTCATGCAATATGGCATCGTGGC...CCCCACCCCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp ACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTGAGCCTGGGGCGTCCTaGCCAGTGGGGTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TFPCTWDVPTYVGTLARSEPGAS*PVGCPP
Trigger: GGGAGGACACCCCACTGGCCAGGACGCCCCAGGCTC...ACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCAGGGGCTGCACAGCTaGGGCAATGCAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRQGLHS*GNAVLV
Trigger: CACCAGGACTGCATTGCCCCAGCTGTGCAGCCCCTG...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGAGGGGCAGGAGATGTTaGCCGTGGTATTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RDKAGAGRGGPISQTATLRGRRC*PWYWRG
Trigger: CCCCCGCCAATACCACGGCCAACATCTCCTGCCCCT...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCCGGTGTTGCACTTTGTaGTGCCAAGGCAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: GVQFWVVQRRPLGARVQPRCCTL*CQGRYQ
Trigger: CTGGTACCTGCCTTGGCACCACAAAGTGCAACACCG...GGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTCAGCTGCTGTACATCTTaGCCACCTCCTTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: GTLARSSRHSPHSRPGLLSCCTS*PPPSGP
Trigger: AGGTCCAGAAGGAGGTGGCCAAGATGTACAGCAGCT...GAGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CCAGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCGCAAACAGATTCGCGTaGATGGCATTGCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PASAGRPVLGCPATPSGCANRFA*MALRVQ
Trigger: CTGCACCCGCAATGCCATCCACGCGAATCTGTTTGC...GCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCTGGGTCAGCGTGGACTTaGCCAGCCGGAACTTGTAGT +
Preference number: 4 (lower is better)
Translates to: ASSSGLSSDALWVPESSPGSAWT*PAGTCS
Trigger: ACTACAAGTTCCGGCTGGCCAAGTCCACGCTGACCC...AGGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGGGTCGAAGAAGAGCTTaGCGGAGCGCAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRGRRRA*RSAGCP
Trigger: AGGGCACCCTGCGCTCCGCCAAGCTCTTCTTCGACC...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCGAAGATGAGGCCCTGTaGTTGCTGGTGTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QLGVQFWVVQRRPLGARVEDEAL*LLVFRS
Trigger: GGAGCGGAACACCAGCAACCACAGGGCCTCATCTTC...GACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGAGTCCAGCCCTAGCTaGGGTCCCAGCAGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RDKAGAGRGGPISQTATLESSPS*GPSRVQ
Trigger: CTGAACCCTGCTGGGACCCCAGCTAGGGCTGGACTC...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp AGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCACATACGTGGGGACACTaGCACGCAGTTCACGGCACA +
Preference number: 4 (lower is better)
Translates to: SLSWASSSGLSSDALWVPHTWGH*HAVHGT
Trigger: TGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATG...TGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGCGATGCCATATTGCATaGACACCGCGGCCACACGGC +
Preference number: 4 (lower is better)
Translates to: RDKAGAGRGGPISQTATLRCHIA*TPRPHG
Trigger: GCCGTGTGGCCGCGGTGTTCATGCAATATGGCATCG...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp AGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCATGTTGCACTTTGTGGTaGCAAGGCAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLSWASSSGLSSDALWVPCCTLW*QGRYQG
Trigger: CCCCTGGTACCTGCCTTGGCACCACAAAGTGCAACA...TGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp CCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCAGCCCATGTTGTCATTaGTGGTCCAGCACTGGACGT +
Preference number: 4 (lower is better)
Translates to: PTYVGTLARSSRHSPHSRSPCCH*WSSTGR
Trigger: ACGTCCAGTGCTGGACCAGCAATGACAACATGGGCT...GCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGATGAGGCCCTGTGGTTaGTGGTGTTCCGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RDKAGAGRGGPISQTATLMRPCG*WCSAPP
Trigger: GGGAGGAGCGGAACACCAGCAACCACAGGGCCTCAT...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp AGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCACAGATGAATCCTGGCTaGCACCACCCCTCCCAAACT +
Preference number: 4 (lower is better)
Translates to: SLSWASSSGLSSDALWVPQMNPG*HHPSQT
Trigger: AGTTTGGGAGGGGTGGTGGCAGCCAGGATTCATCTG...TGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCGACGCCCTCTGGGTaGCAGAGTCCAGCCCTAGCT +
Preference number: 4 (lower is better)
Translates to: GGHFHAHGTCRHTWGHWHATPSG*QSPALA
Trigger: AGCTAGGGCTGGACTCTGGCACCCAGAGGGCGTCGC...GTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGTCCTCGCCATCCATCTaGCACTGGGAGGCATCACGC +
Preference number: 4 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRSSPSI*HWEASR
Trigger: GCGTGATGCCTCCCAGTGCCAGATGGATGGCGAGGA...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp AGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCATTGGCCACCTCCTTCTaGACCTCAATCTCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: SLSWASSSGLSSDALWVPLATSF*TSISSP
Trigger: TGGCGAGGAGATTGAGGTCCAGAAGGAGGTGGCCAA...TGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTCTGCTCACCTGCAGCCAGCAGTAGTTaGCCACGATGCCATATTGCA +
Preference number: 4 (lower is better)
Translates to: ARSSRHSPHSRPGLLCSPAASSS*PRCHIA
Trigger: TGCAATATGGCATCGTGGCCAACTACTGCTGGCTGC...AGGTGAGCAGAGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGGTGGGGGCAGCCAGCAGTAGTTaGCCACGATGCCATATTGCA +
Preference number: 4 (lower is better)
Translates to: AGAGRGGPISQTATLGVGAASSS*PRCHIA
Trigger: TGCAATATGGCATCGTGGCCAACTACTGCTGGCTGC...CCCCACCCCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp ACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTAGGCCCTGTGGTTGCTaGTGTTCCGCTCCTCCCATA +
Preference number: 4 (lower is better)
Translates to: TCRHTWGHWHAVHGTAPTRPCGC*CSAPPI
Trigger: TATGGGAGGAGCGGAACACCAGCAACCACAGGGCCT...AGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGTCCGCAGATGAATCCTaGCTGCCACCACCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRSADES*LPPPLP
Trigger: TGGGAGGGGTGGTGGCAGCCAGGATTCATCTGCGGA...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTCACATTTCCATGCACATaGGACGTGCCGACATACGTG +
Preference number: 4 (lower is better)
Translates to: GTLARSSRHSPHSRPGLLTFPCT*DVPTYV
Trigger: CACGTATGTCGGCACGTCCCATGTGCATGGAAATGT...GAGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGTTGGCCACGAGCAGCTaGACGATGCGGACGAAGATG +
Preference number: 4 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRLATSS*TMRTKM
Trigger: CATCTTCGTCCGCATCGTTCAGCTGCTCGTGGCCAA...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp CATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTGGGGGTCTCCGCAGATaGATCCTGGCTGCCACCACC +
Preference number: 4 (lower is better)
Translates to: HFHAHGTCRHTWGHWHAVGGLRR*ILAATT
Trigger: GGTGGTGGCAGCCAGGATTCATCTGCGGAGACCCCC...AACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGCAGACACTTGACCACTaGCCAGGGGACGACGAACAG +
Preference number: 4 (lower is better)
Translates to: RDKAGAGRGGPISQTATLQTLDH*PGDDEQ
Trigger: CTGTTCGTCGTCCCCTGGGCAGTGGTCAAGTGTCTG...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp TTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCCAAACTGCAGCTCCTTaGTGGGAGGGCCGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LEDISMHMGRADIRGDTGQTAAP*WEGRGR
Trigger: CCGGCCACGGCCCTCCCAGCAAGGAGCTGCAGTTTG...GCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGTCCTCTGCTCACCTCTaGACCAGGGACAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RDKAGAGRGGPISQTATLSSAHL*TRDKAG
Trigger: ACCTGCCTTGTCCCTGGTGCAGAGGTGAGCAGAGGA...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp ACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTGCTGCCTCCCACATCTaGCAGGGGCTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TFPCTWDVPTYVGTLARSAASHI*QGLHSW
Trigger: CCAGCTGTGCAGCCCCTGCCAGATGTGGGAGGCAGC...ACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTTGCACACCAGCTCCGTaGGAGGGGGCAGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: HFHAHGTCRHTWGHWHAVCTPAP*EGAAGS
Trigger: TGAGCCTGCTGCCCCCTCCCACGGAGCTGGTGTGCA...AACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp TTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCTGTTGGCCGTGGTATTaGCGGGGGTGTCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LEDISMHMGRADIRGDTGCWPWY*RGCPAS
Trigger: GCTGGCCGGACACCCCCGCCAATACCACGGCCAACA...GCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGTTGGCCACCTCCTTCTaGACCTCAATCTCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: GQGRCRERRPNLADSHTGLATSF*TSISSP
Trigger: TGGCGAGGAGATTGAGGTCCAGAAGGAGGTGGCCAA...CCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCTAGCTGCTGTACATCTTaGCCACCTCCTTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: ASSSGLSSDALWVPESSPSCCTS*PPPSGP
Trigger: AGGTCCAGAAGGAGGTGGCCAAGATGTACAGCAGCT...AGGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp ACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTGGACGACGAACAGCATaGGGGCACCCCAGCCGATGC +
Preference number: 4 (lower is better)
Translates to: TFPCTWDVPTYVGTLARSGRRTA*GHPSRC
Trigger: GCATCGGCTGGGGTGCCCCCATGCTGTTCGTCGTCC...ACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCTTGCTGGTCCAGCACTaGACGTTCTCGAACAGACAC +
Preference number: 4 (lower is better)
Translates to: RADIRGDTGTQFTAQPPLLLVQH*TFSNRH
Trigger: GTGTCTGTTCGAGAACGTCCAGTGCTGGACCAGCAA...GAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCCCATGTTGTCATTGCTaGTCCAGCACTGGACGTTCT +
Preference number: 4 (lower is better)
Translates to: GVQFWVVQRRPLGARVQPPCCHC*SSTGRS
Trigger: AGAACGTCCAGTGCTGGACCAGCAATGACAACATGG...GGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGAGGCCCTGTGGTTGCTaGTGTTCCGCTCCTCCCATA +
Preference number: 4 (lower is better)
Translates to: RDKAGAGRGGPISQTATLRPCGC*CSAPPI
Trigger: TATGGGAGGAGCGGAACACCAGCAACCACAGGGCCT...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp TTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCTCCAGCGACGCCCTCTaGGTGCCAGAGTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LEDISMHMGRADIRGDTGSSDAL*VPESSP
Trigger: AGGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGA...GCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp TTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCGCCCCCAGCCTCAGCTaGGCGTCCAGTTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LEDISMHMGRADIRGDTGAPSLS*ASSSGL
Trigger: CAACCCAGAACTGGACGCCCAGCTGAGGCTGGGGGC...GCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGACGTGCCGACATACGTaGGGACACTGGCACGCAGTT +
Preference number: 4 (lower is better)
Translates to: RDKAGAGRGGPISQTATLTCRHT*GHWHAV
Trigger: AACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGT...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp TTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCTCTGTGTGGTGCATCTaGCGTGCCCGCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LEDISMHMGRADIRGDTGSVWCI*RARSLA
Trigger: GGCCAAGCTGCGGGCACGGCAGATGCACCACACAGA...GCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp ACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTCCACCCCTCCCAAACTaGAGCTCCTTGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TFPCTWDVPTYVGTLARSPPLPN*SSLLGG
Trigger: CCCTCCCAGCAAGGAGCTGCAGTTTGGGAGGGGTGG...ACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGTGGAGGACATTTCCATaGACATGGGACGTGCCGACA +
Preference number: 4 (lower is better)
Translates to: GQGRCRERRPNLADSHTGWRTFP*TWDVPT
Trigger: TGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCA...CCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCAGGGGCTGCACAGCTaGGGCAATGCAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: HFHAHGTCRHTWGHWHAVQGLHS*GNAVLV
Trigger: CACCAGGACTGCATTGCCCCAGCTGTGCAGCCCCTG...AACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCGGTGTTGCACTTTGTaGTGCCAAGGCAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRRCCTL*CQGRYQ
Trigger: CTGGTACCTGCCTTGGCACCACAAAGTGCAACACCG...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTACTGTGTACATCACCTaGAAGCTGCTGTACATCTTG +
Preference number: 4 (lower is better)
Translates to: GDTGTQFTAQPPLPPWTPTVYIT*KLLYIL
Trigger: CAAGATGTACAGCAGCTTCCAGGTGATGTACACAGT...AGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGACAGATTCGCGTGGATaGCATTGCGGGTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRTDSRG*HCGCSA
Trigger: TGCACTGCACCCGCAATGCCATCCACGCGAATCTGT...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACCAGACACTTGACCACTaGCCAGGGGACGACGAACAG +
Preference number: 4 (lower is better)
Translates to: GGHFHAHGTCRHTWGHWHQTLDH*PGDDEQ
Trigger: CTGTTCGTCGTCCCCTGGGCAGTGGTCAAGTGTCTG...GTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGAGCCCATGTTGTCATTaGTGGTCCAGCACTGGACGT +
Preference number: 4 (lower is better)
Translates to: RDKAGAGRGGPISQTATLSPCCH*WSSTGR
Trigger: ACGTCCAGTGCTGGACCAGCAATGACAACATGGGCT...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp CTTTATTGTTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGAGGGTGCCCTGGGCGTaGTCGTCCGTCACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LYCWRTFPCTWDVPTYVGRVPWA*SSVTKA
Trigger: CGCCTTCGTGACGGACGAGCACGCCCAGGGCACCCT...CCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAACAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACTCCTCTGCTCACCTCTaGACCAGGGACAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GGHFHAHGTCRHTWGHWHSSAHL*TRDKAG
Trigger: ACCTGCCTTGTCCCTGGTGCAGAGGTGAGCAGAGGA...GTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp TTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCAGGAGATGTTGGCCGTaGTATTGGCGGGGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: LEDISMHMGRADIRGDTGRRCWP*YWRGCP
Trigger: CGGACACCCCCGCCAATACCACGGCCAACATCTCCT...GCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGTTGCTGGTCCAGCACTaGACGTTCTCGAACAGACAC +
Preference number: 4 (lower is better)
Translates to: RDKAGAGRGGPISQTATLLLVQH*TFSNRH
Trigger: GTGTCTGTTCGAGAACGTCCAGTGCTGGACCAGCAA...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACACGTGCCGACATACGTaGGGACACTGGCACGCAGTT +
Preference number: 4 (lower is better)
Translates to: GGHFHAHGTCRHTWGHWHTCRHT*GHWHAV
Trigger: AACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGT...GTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp ACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTGGCCCTGGAAGGAGCTaGGGAAGAGGTCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TFPCTWDVPTYVGTLARSGPGRS*GRGRRR
Trigger: TCTTCTTCGACCTCTTCCTCAGCTCCTTCCAGGGCC...ACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp ACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTCATGCACATGGGACGTaGCGACATACGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: TFPCTWDVPTYVGTLARSHAHGT*RHTWGH
Trigger: GTGTCCCCACGTATGTCGGCACGTCCCATGTGCATG...ACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCTACTGTGTACATCACCTaGAAGCTGCTGTACATCTTG +
Preference number: 4 (lower is better)
Translates to: ASSSGLSSDALWVPESSPTVYIT*KLLYIL
Trigger: CAAGATGTACAGCAGCTTCCAGGTGATGTACACAGT...AGGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR GCA 90 bp GGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACTGGAGGACATTTCCATaGACATGGGACGTGCCGACA +
Preference number: 4 (lower is better)
Translates to: GGHFHAHGTCRHTWGHWHWRTFP*TWDVPT
Trigger: TGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCA...GTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp TTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACAGATTCGCGTGGATaGCATTGCGGGTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LEDISMHMGRADIRGDTGTDSRG*HCGCSA
Trigger: TGCACTGCACCCGCAATGCCATCCACGCGAATCTGT...GCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp TCTTTATTGTTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGCCGTGCCCGCAGCTTaGCCACGAGCAGCTGAACGA +
Preference number: 4 (lower is better)
Translates to: SLLLEDISMHMGRADIRGAVPAA*PRAAER
Trigger: TCGTTCAGCTGCTCGTGGCCAAGCTGCGGGCACGGC...CCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAACAATAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR TCA 90 bp CTTTATTGTTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGCGGGCCCGCATCTCTTaGACACGAAGCGGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LYCWRTFPCTWDVPTYVGRARIS*TRSGVA
Trigger: TGCAACACCGCTTCGTGTTCAAGAGATGCGGGCCCG...CCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAACAATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CTTTATTGTTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGGGGGCAATGCAGTCCTaGTGGGTGTGTACGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LYCWRTFPCTWDVPTYVGGAMQS*WVCTLL
Trigger: GAGGAGCGTACACACCCACCAGGACTGCATTGCCCC...CCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAACAATAAAG
56% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp GGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACCCATGTTGTCATTGCTaGTCCAGCACTGGACGTTCT +
Preference number: 4 (lower is better)
Translates to: GGHFHAHGTCRHTWGHWHPCCHC*SSTGRS
Trigger: AGAACGTCCAGTGCTGGACCAGCAATGACAACATGG...GTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp CATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTACATTTCCATGCACATaGGACGTGCCGACATACGTG +
Preference number: 4 (lower is better)
Translates to: HFHAHGTCRHTWGHWHAVTFPCT*DVPTYV
Trigger: CACGTATGTCGGCACGTCCCATGTGCATGGAAATGT...AACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CCA 90 bp TCTTTATTGTTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGCAAACAGATTCGCGTaGATGGCATTGCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SLLLEDISMHMGRADIRGANRFA*MALRVQ
Trigger: CTGCACCCGCAATGCCATCCACGCGAATCTGTTTGC...CCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAACAATAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS CCA 90 bp CCCTCTGAGCCTCAGGGTCCGCGCGGCGCTGCTCGGGGGTCGGCTTaGCTCCCCGCCGTCCTCTGGGCGCGCTCGGGTCGGGCGCCGGTG +
Preference number: 5 (lower is better)
Translates to: PSEPQGPRGAARGSA*LPAVLWARSGRAPV
Trigger: CACCGGCGCCCGACCCGAGCGCGCCCAGAGGACGGCGGGGAGCCAAGCCGACCCCCGAGCAGCGCCGCGCGGACCCTGAGGCTCAGAGGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000572185.1
ENST00000671794.1
ENST00000672485.1
ENST00000673258.1
CDS TCA 90 bp CTTGGCTCCCCGCCGTCCTCTGGGCGCGCTCGGGTCGGGCGCCGGTaGCCGCTCGTCTTCGCGGCGCTGCCAGATCGGGGTCGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: LGSPPSSGRARVGRR*PLVFAALPDRGRCK
Trigger: TTTGCACCGACCCCGATCTGGCAGCGCCGCGAAGACGAGCGGTCACCGGCGCCCGACCCGAGCGCGCCCAGAGGACGGCGGGGAGCCAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572185.1
ENST00000673258.1
CDS GCA 90 bp CACCGCCTGGTACAGGTGCAGTGTGAGCGCGGCTACGTGGCCACCTaGCTGGCTGCCCACCCACCCACCTGCCTGGGGCCGCCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: HRLVQVQCERGYVAT*LAAHPPTCLGPPRG
Trigger: CCCCCTCGGCGGCCCCAGGCAGGTGGGTGGGTGGGCAGCCAGGCAGGTGGCCACGTAGCCGCGCTCACACTGCACCTGTACCAGGCGGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570996.5
ENST00000672485.1
CDS TCA 90 bp CCGCGGCCACACGGCAGCCAGCCACCGCCTGGTACAGGTGCAGTGTaGGCGCGGCTACGTGGCCACCTGCCTGGCTGCCCACCCACCCAC +
Preference number: 5 (lower is better)
Translates to: PRPHGSQPPPGTGAV*ARLRGHLPGCPPTH
Trigger: GTGGGTGGGTGGGCAGCCAGGCAGGTGGCCACGTAGCCGCGCTCACACTGCACCTGTACCAGGCGGTGGCTGGCTGCCGTGTGGCCGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570996.5
ENST00000672485.1
CDS-3UTR CAA 90 bp ATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGTGCTCGGGGGTCGGCTaGGCTCCCCGCCGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: IRGDTGTQFTAQPPLPPWCSGVG*APRRPL
Trigger: CAGAGGACGGCGGGGAGCCAAGCCGACCCCCGAGCA...CCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS GCA 90 bp ATGAACACCGCGGCCACACGGCAGCCAGCCACCGCCTGGTACAGGTaGAGTGTGAGCGCGGCTACGTGGCCACCTGCCTGGCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: MNTAATRQPATAWYR*SVSAATWPPAWLPT
Trigger: GGTGGGCAGCCAGGCAGGTGGCCACGTAGCCGCGCTCACACTGCACCTGTACCAGGCGGTGGCTGGCTGCCGTGTGGCCGCGGTGTTCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570996.5
ENST00000672485.1
CDS-3UTR CAA 90 bp GGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTCCAAACTGCAGCTCCTaGCTGGGAGGGCCGTGGCCG +
Preference number: 5 (lower is better)
Translates to: GDTGTQFTAQPPLPPWTPPNCSS*LGGPWP
Trigger: CGGCCACGGCCCTCCCAGCAAGGAGCTGCAGTTTGG...AGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS CCA 90 bp GCCTGCCGCCCACTGACCTGGACCTCAATCTCCTCGCCATCCATCTaGCACTGGGAGGCATCACGCCAAGGCTGCCCCCGGGGTCCACGC +
Preference number: 5 (lower is better)
Translates to: ACRPLTWTSISSPSI*HWEASRQGCPRGPR
Trigger: GCGTGGACCCCGGGGGCAGCCTTGGCGTGATGCCTCCCAGTGCCAGATGGATGGCGAGGAGATTGAGGTCCAGGTCAGTGGGCGGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574283.2
ENST00000672538.1
CDS-3UTR CAA 90 bp GGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTATGTTGGCCGTGGTATaGGCGGGGGTGTCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: GDTGTQFTAQPPLPPWTPMLAVV*AGVSGQ
Trigger: CTGGCCGGACACCCCCGCCAATACCACGGCCAACAT...AGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTCCAGGGGCAGGAGATGTaGGCCGTGGTATTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: GTLARSSRHSPHSRPGLLQGQEM*AVVLAG
Trigger: CCCCGCCAATACCACGGCCAACATCTCCTGCCCCTG...GAGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCCCAAACTGCAGCTCCTaGCTGGGAGGGCCGTGGCCG +
Preference number: 5 (lower is better)
Translates to: GVQFWVVQRRPLGARVQPPNCSS*LGGPWP
Trigger: CGGCCACGGCCCTCCCAGCAAGGAGCTGCAGTTTGG...GGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS GCA 90 bp CCTTGCTGGGAGGGCCGTGGCCGGGCGAAGATGAGGCCCTGTGGTTaGTGGTGTTCCGCTCCTCCCATAGCACTTTGCCCAGGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: PCWEGRGRAKMRPCG*WCSAPPIALCPGAS
Trigger: GCTGGCGCCTGGGCAAAGTGCTATGGGAGGAGCGGAACACCAGCAACCACAGGGCCTCATCTTCGCCCGGCCACGGCCCTCCCAGCAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS CCA 90 bp TGCTGGGAGGGCCGTGGCCGGGCGAAGATGAGGCCCTGTGGTTGCTaGTGTTCCGCTCCTCCCATAGCACTTTGCCCAGGCGCCAGCGGT +
Preference number: 5 (lower is better)
Translates to: CWEGRGRAKMRPCGC*CSAPPIALCPGASG
Trigger: ACCGCTGGCGCCTGGGCAAAGTGCTATGGGAGGAGCGGAACACCAGCAACCACAGGGCCTCATCTTCGCCCGGCCACGGCCCTCCCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS-3UTR CAA 90 bp CCAGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGGGGCAGGAGATGTaGGCCGTGGTATTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: PASAGRPVLGCPATPSGCQGQEM*AVVLAG
Trigger: CCCCGCCAATACCACGGCCAACATCTCCTGCCCCTG...GCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCGCGTCCAGTTCTGGGTaGTCCAGCGACGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: GVQFWVVQRRPLGARVQPASSSG*SSDALW
Trigger: CCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGC...GGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGGTGGGGGCGTCCAGTTCTGGGTaGTCCAGCGACGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: AGAGRGGPISQTATLGVGASSSG*SSDALW
Trigger: CCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGC...CCCCACCCCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS CCA 90 bp AGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTaGGTGCCAGAGTCCAGCCCTAGCTGGGGTCCCAGCAGGGTTCAG +
Preference number: 5 (lower is better)
Translates to: SLSWASSSGLSSDAL*VPESSPSWGPSRVQ
Trigger: CTGAACCCTGCTGGGACCCCAGCTAGGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS CCA 90 bp CCATATTGCATGAACACCGCGGCCACACGGCAGCCAGCCACCGCCTaGTACAGGTGCAGTGTGAGCGCGGCTACGTGGCCACCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: PYCMNTAATRQPATA*YRCSVSAATWPPAW
Trigger: CCAGGCAGGTGGCCACGTAGCCGCGCTCACACTGCACCTGTACCAGGCGGTGGCTGGCTGCCGTGTGGCCGCGGTGTTCATGCAATATGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570996.5
ENST00000672485.1
CDS-3UTR CAA 90 bp CGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCAGGTCGAAGAAGAGCTaGGCGGAGCGCAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: RADIRGDTGTQFTAQPPLRSKKS*AERRVP
Trigger: GGGCACCCTGCGCTCCGCCAAGCTCTTCTTCGACCT...GAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp AGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCATCCTCCCATAGCACTTaGCCCAGGCGCCAGCGGTGC +
Preference number: 5 (lower is better)
Translates to: SLSWASSSGLSSDALWVPSSHST*PRRQRC
Trigger: GCACCGCTGGCGCCTGGGCAAAGTGCTATGGGAGGA...TGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGGTGGGGGATGAGGCCCTGTGGTaGCTGGTGTTCCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AGAGRGGPISQTATLGVGDEALW*LVFRSS
Trigger: GGAGGAGCGGAACACCAGCAACCACAGGGCCTCATC...CCCCACCCCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS TCA 90 bp CTCTCATGCCAGCCCACTCACCCCAGCCGATGCCCAGGTAGAGGCTaGAGAAGCTCCTCTCGGGGAGGGTGGCCAGGCCCAGCAGGTTGT +
Preference number: 5 (lower is better)
Translates to: LSCQPTHPSRCPGRG*RSSSRGGWPGPAGC
Trigger: ACAACCTGCTGGGCCTGGCCACCCTCCCCGAGAGGAGCTTCTTCAGCCTCTACCTGGGCATCGGCTGGGGTGAGTGGGCTGGCATGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571425.1
ENST00000672343.1
CDS GCA 90 bp AAGAGGTCGAAGAAGAGCTTGGCGGAGCGCAGGGTGCCCTGGGCGTaGTCGTCCGTCACGAAGGCGAAGACCACTTCGTGGACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: KRSKKSLAERRVPWA*SSVTKAKTTSWTPS
Trigger: GCTGGGCGTCCACGAAGTGGTCTTCGCCTTCGTGACGGACGAGCACGCCCAGGGCACCCTGCGCTCCGCCAAGCTCTTCTTCGACCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS GCA 90 bp CTGGTGTTCCGCTCCTCCCATAGCACTTTGCCCAGGCGCCAGCGGTaGCAACGCCGCCGCAGCTCCGACTGCACCTCCTTGTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LVFRSSHSTLPRRQR*QRRRSSDCTSLLRK
Trigger: CTTCCTCAACAAGGAGGTGCAGTCGGAGCTGCGGCGGCGTTGGCACCGCTGGCGCCTGGGCAAAGTGCTATGGGAGGAGCGGAACACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS GCA 90 bp CAGATGAATCCTGGCTGCCACCACCCCTCCCAAACTGCAGCTCCTTaGTGGGAGGGCCGTGGCCGGGCGAAGATGAGGCCCTGTGGTTGC +
Preference number: 5 (lower is better)
Translates to: QMNPGCHHPSQTAAP*WEGRGRAKMRPCGC
Trigger: GCAACCACAGGGCCTCATCTTCGCCCGGCCACGGCCCTCCCAGCAAGGAGCTGCAGTTTGGGAGGGGTGGTGGCAGCCAGGATTCATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS CCA 90 bp CCCACATCTGGCAGGGGCTGCACAGCTGGGGCAATGCAGTCCTGGTaGGTGTGTACGCTCCTCCGAGGGCAGCTGAGTGGCAGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: PTSGRGCTAGAMQSW*VCTLLRGQLSGRAA
Trigger: TGCTGCTCTGCCACTCAGCTGCCCTCGGAGGAGCGTACACACCCACCAGGACTGCATTGCCCCAGCTGTGCAGCCCCTGCCAGATGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000572185.1
ENST00000573428.1
ENST00000671708.1
ENST00000671794.1
ENST00000672485.1
ENST00000673258.1
CDS CCA 90 bp GGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCTAGCTaGGGTCCCAGCAGGGTTCAGAAGGGGCTCTCAGCCAATCTAGGG +
Preference number: 5 (lower is better)
Translates to: GLSSDALWVPESSPS*GPSRVQKGLSANLG
Trigger: CCCTAGATTGGCTGAGAGCCCCTTCTGAACCCTGCTGGGACCCCAGCTAGGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp CCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCTTCGCGTGGATGGCATaGCGGGTGCAGTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PTYVGTLARSSRHSPHSRFAWMA*RVQCSL
Trigger: CAAGCTGCACTGCACCCGCAATGCCATCCACGCGAA...GCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp CCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCGGCCACGATGCCATATaGCATGAACACCGCGGCCAC +
Preference number: 5 (lower is better)
Translates to: PTYVGTLARSSRHSPHSRGHDAI*HEHRGH
Trigger: GTGGCCGCGGTGTTCATGCAATATGGCATCGTGGCC...GCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp AGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGATGAGGCCCTGTGGTaGCTGGTGTTCCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLSWASSSGLSSDALWVPDEALW*LVFRSS
Trigger: GGAGGAGCGGAACACCAGCAACCACAGGGCCTCATC...TGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS CCA 90 bp ATCTTGGCCACCTCCTTCTGGACCTCAATCTCCTCGCCATCCATCTaGCACTGGGAGGCATCACGCCAAGGCTGCCCCCGGGGTCCACGC +
Preference number: 5 (lower is better)
Translates to: ILATSFWTSISSPSI*HWEASRQGCPRGPR
Trigger: GCGTGGACCCCGGGGGCAGCCTTGGCGTGATGCCTCCCAGTGCCAGATGGATGGCGAGGAGATTGAGGTCCAGAAGGAGGTGGCCAAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS-3UTR CAA 90 bp CATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTTGCTCGGGGGTCGGCTaGGCTCCCCGCCGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HFHAHGTCRHTWGHWHAVCSGVG*APRRPL
Trigger: CAGAGGACGGCGGGGAGCCAAGCCGACCCCCGAGCA...AACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGATGTTGGCCGTGGTATaGGCGGGGGTGTCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: RDKAGAGRGGPISQTATLMLAVV*AGVSGQ
Trigger: CTGGCCGGACACCCCCGCCAATACCACGGCCAACAT...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCTTCGGGCCCGCATCTCTaGAACACGAAGCGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: ASSSGLSSDALWVPESSPSGPHL*NTKRCC
Trigger: GCAACACCGCTTCGTGTTCAAGAGATGCGGGCCCGA...AGGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTAAGCTGCTGTACATCTaGGCCACCTCCTTCTGGACC +
Preference number: 5 (lower is better)
Translates to: GDTGTQFTAQPPLPPWTPKLLYI*ATSFWT
Trigger: GGTCCAGAAGGAGGTGGCCAAGATGTACAGCAGCTT...AGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS TCA 90 bp AGGCCCCTGGGTCCCAGCTTCCACGCCCTGGCACTGTCTGCCCACTaGAAACTCCACGGGGCTGTAGGTGGTATTACCCATCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: RPLGPSFHALALSAH*KLHGAVGGITHLGL
Trigger: CAGGCCCAGATGGGTAATACCACCTACAGCCCCGTGGAGTTTTCAGTGGGCAGACAGTGCCAGGGCGTGGAAGCTGGGACCCAGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572185.1
ENST00000673258.1
CDS CCA 90 bp CCACTTCTCAAACAGGAAGTCCATCACCTGAGCGGAGGGGACCTGTaGCTGGCAGGCCAGCAGCAGCAGCAACAGCAGCAGGGGTCGCTG +
Preference number: 5 (lower is better)
Translates to: PLLKQEVHHLSGGDL*LAGQQQQQQQQGSL
Trigger: CAGCGACCCCTGCTGCTGTTGCTGCTGCTGCTGGCCTGCCAGCCACAGGTCCCCTCCGCTCAGGTGATGGACTTCCTGTTTGAGAAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000572185.1
ENST00000573428.1
ENST00000671708.1
ENST00000671794.1
ENST00000672485.1
ENST00000673258.1
CDS-3UTR CAA 90 bp CCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCAAGCGGTGTTGCACTTaGTGGTGCCAAGGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: PTYVGTLARSSRHSPHSRKRCCT*WCQGRY
Trigger: GTACCTGCCTTGGCACCACAAAGTGCAACACCGCTT...GCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GCACGCAGTTCACGGCACAGCCCCCACTCCCGCCCTGGACTCCTCTGCTCACCTGAACACGAAGCGGTGTaGCACTTTGTGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: ARSSRHSPHSRPGLLCSPEHEAV*HFVVPR
Trigger: CCTTGGCACCACAAAGTGCAACACCGCTTCGTGTTC...AGGTGAGCAGAGGAGTCCAGGGCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCCAGCCCAAGCTGCTGTACATCTaGGCCACCTCCTTCTGGACC +
Preference number: 5 (lower is better)
Translates to: GVQFWVVQRRPLGARVQPKLLYI*ATSFWT
Trigger: GGTCCAGAAGGAGGTGGCCAAGATGTACAGCAGCTT...GGGCTGGACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCCAGGCCCAGCAGGTaGTGCAGGTACAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GGHFHAHGTCRHTWGHWHARPSR*CRYRPS
Trigger: GGAGGGCCTGTACCTGCACAACCTGCTGGGCCTGGC...GTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp CCAGCCTCAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCAAGCCCATGTTGTCATaGCTGGTCCAGCACTGGACG +
Preference number: 5 (lower is better)
Translates to: PASAGRPVLGCPATPSGCKPMLS*LVQHWT
Trigger: CGTCCAGTGCTGGACCAGCAATGACAACATGGGCTT...GCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTGAGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGGTGGGGCACCAGAAGCCCATGTaGTCATTGCTGGTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: AGAGRGGPISQTATLGVGHQKPM*SLLVQH
Trigger: GTGCTGGACCAGCAATGACAACATGGGCTTCTGGTG...CCCCACCCCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGGGGGTGGGGGGCCAGCAGGAATACTaGTCGAAGGTTCTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: AGAGRGGPISQTATLGVGGQQEY*SKVLLH
Trigger: GTGCAACAGAACCTTCGACAAGTATTCCTGCTGGCC...CCCCACCCCCAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp CAGCTGGGCGTCCAGTTCTGGGTTGTCCAGCGACGCCCTCTGGGTGCCAGAGTCGAACACGAAGCGGTGTaGCACTTTGTGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: QLGVQFWVVQRRPLGARVEHEAV*HFVVPR
Trigger: CCTTGGCACCACAAAGTGCAACACCGCTTCGTGTTC...GACTCTGGCACCCAGAGGGCGTCGCTGGACAACCCAGAACTGGACGCCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGTTCGCGTGGATGGCATaGCGGGTGCAGTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRFAWMA*RVQCSL
Trigger: CAAGCTGCACTGCACCCGCAATGCCATCCACGCGAA...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGGGCCACGATGCCATATaGCATGAACACCGCGGCCAC +
Preference number: 5 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRGHDAI*HEHRGH
Trigger: GTGGCCGCGGTGTTCATGCAATATGGCATCGTGGCC...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS GCA 90 bp GGACTTGGCCAGCCGGAACTTGTAGTCTGTGTGGTGCATCTGCCGTaGCCGCAGCTTGGCCACGAGCAGCTGAACGATGCGGACGAAGAT +
Preference number: 5 (lower is better)
Translates to: GLGQPELVVCVVHLP*PQLGHEQLNDADED
Trigger: ATCTTCGTCCGCATCGTTCAGCTGCTCGTGGCCAAGCTGCGGGCACGGCAGATGCACCACACAGACTACAAGTTCCGGCTGGCCAAGTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS-3UTR CAA 90 bp CATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTAGGTCGAAGAAGAGCTaGGCGGAGCGCAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: HFHAHGTCRHTWGHWHAVRSKKS*AERRVP
Trigger: GGGCACCCTGCGCTCCGCCAAGCTCTTCTTCGACCT...AACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp ACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCCTCCCATAGCACTTaGCCCAGGCGCCAGCGGTGC +
Preference number: 5 (lower is better)
Translates to: TFPCTWDVPTYVGTLARSSSHST*PRRQRC
Trigger: GCACCGCTGGCGCCTGGGCAAAGTGCTATGGGAGGA...ACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS GCA 90 bp CAGCCGGTTCTGGGGCAATGCCACCGTTCTGTTATTTCCTGGCTCTaGGGCCTGAGGCAAGTCCCCAGCTCTGTGGCTCAGTTACCTCGT +
Preference number: 5 (lower is better)
Translates to: QPVLGQCHRSVISWL*GLRQVPSSVAQLPR
Trigger: ACGAGGTAACTGAGCCACAGAGCTGGGGACTTGCCTCAGGCCGCAGAGCCAGGAAATAACAGAACGGTGGCATTGCCCCAGAACCGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572185.1
ENST00000673258.1
CDS CCA 90 bp CAGCAGCAGCCGGTTCTGGGGCAATGCCACCGTTCTGTTATTTCCTaGCTCTGCGGCCTGAGGCAAGTCCCCAGCTCTGTGGCTCAGTTA +
Preference number: 5 (lower is better)
Translates to: QQQPVLGQCHRSVIS*LCGLRQVPSSVAQL
Trigger: TAACTGAGCCACAGAGCTGGGGACTTGCCTCAGGCCGCAGAGCCAGGAAATAACAGAACGGTGGCATTGCCCCAGAACCGGCTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572185.1
ENST00000673258.1
CDS-3UTR CAA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGTTGTCGAAGGTTCTGTaGCACACCAGCTCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRLSKVL*HTSSVG
Trigger: TCCCACGGAGCTGGTGTGCAACAGAACCTTCGACAA...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp AGGGACAAGGCAGGTGCAGGGAGAGGAGGCCCAATCTCGCAGACAGCCACACTGAAGCGGTGTTGCACTTaGTGGTGCCAAGGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RDKAGAGRGGPISQTATLKRCCT*WCQGRY
Trigger: GTACCTGCCTTGGCACCACAAAGTGCAACACCGCTT...CAGTGTGGCTGTCTGCGAGATTGGGCCTCCTCTCCCTGCACCTGCCTTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACCAGAAGCCCATGTaGTCATTGCTGGTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRHQKPM*SLLVQH
Trigger: GTGCTGGACCAGCAATGACAACATGGGCTTCTGGTG...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS TCA 90 bp TGTTGTCATTGCTGGTCCAGCACTGGACGTTCTCGAACAGACACTTaGCCACTGCCCAGGGGACGACGAACAGCATGGGGGCACCTGTGG +
Preference number: 5 (lower is better)
Translates to: CCHCWSSTGRSRTDT*PLPRGRRTAWGHLW
Trigger: CCACAGGTGCCCCCATGCTGTTCGTCGTCCCCTGGGCAGTGGTCAAGTGTCTGTTCGAGAACGTCCAGTGCTGGACCAGCAATGACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571425.1
ENST00000672343.1
CDS-3UTR CAA 90 bp ACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCGGGCCCGCATCTCTaGAACACGAAGCGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: TFPCTWDVPTYVGTLARSSGPHL*NTKRCC
Trigger: GCAACACCGCTTCGTGTTCAAGAGATGCGGGCCCGA...ACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp TGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCACGAAGATGAAGAAGTaGATCAGGATGGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: CRHTWGHWHAVHGTAPTPTKMKK*IRMARK
Trigger: CTTCCTGGCCATCCTGATCAACTTCTTCATCTTCGT...GGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp TCTTTATTGTTGGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGCCAGGCCCAGCAGGTaGTGCAGGTACAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SLLLEDISMHMGRADIRGARPSR*CRYRPS
Trigger: GGAGGGCCTGTACCTGCACAACCTGCTGGGCCTGGC...CCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCCAACAATAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp GGAGGACATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACAAGCCCATGTTGTCATaGCTGGTCCAGCACTGGACG +
Preference number: 5 (lower is better)
Translates to: GGHFHAHGTCRHTWGHWHKPMLS*LVQHWT
Trigger: CGTCCAGTGCTGGACCAGCAATGACAACATGGGCTT...GTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp CCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTCCCGCTTGAGCTCTTTATTGTaGGAGGACATTTCCATGCAC +
Preference number: 5 (lower is better)
Translates to: PTYVGTLARSSRHSPHSRLSSLL*EDISMH
Trigger: GTGCATGGAAATGTCCTCCAACAATAAAGAGCTCAA...GCGGGAGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS TCA 90 bp TTCTGGGGCAATGCCACCGTTCTGTTATTTCCTGGCTCTGCGGCCTaGGGCAAGTCCCCAGCTCTGTGGCTCAGTTACCTCGTTACCTCA +
Preference number: 5 (lower is better)
Translates to: FWGNATVLLFPGSAA*GKSPALWLSYLVTS
Trigger: TGAGGTAACGAGGTAACTGAGCCACAGAGCTGGGGACTTGCCTCAGGCCGCAGAGCCAGGAAATAACAGAACGGTGGCATTGCCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572185.1
ENST00000673258.1
CDS-3UTR CAA 90 bp CATTTCCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTTTGTCGAAGGTTCTGTaGCACACCAGCTCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: HFHAHGTCRHTWGHWHAVLSKVL*HTSSVG
Trigger: TCCCACGGAGCTGGTGTGCAACAGAACCTTCGACAA...AACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp CCATGCACATGGGACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGACGAAGATGAAGAAGTaGATCAGGATGGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PCTWDVPTYVGTLARSSRTKMKK*IRMARK
Trigger: CTTCCTGGCCATCCTGATCAACTTCTTCATCTTCGT...CCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS-3UTR CAA 90 bp ACGTGCCGACATACGTGGGGACACTGGCACGCAGTTCACGGCACAGCCCCCACTTTGAGCTCTTTATTGTaGGAGGACATTTCCATGCAC +
Preference number: 5 (lower is better)
Translates to: TCRHTWGHWHAVHGTAPTLSSLL*EDISMH
Trigger: GTGCATGGAAATGTCCTCCAACAATAAAGAGCTCAA...AGTGGGGGCTGTGCCGTGAACTGCGTGCCAGTGTCCCCACGTATGTCGGCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400723.8
ENST00000671794.1
CDS CCA 72 bp GCTGCTCGGGGGTCGGCTTGGCTCCCCGCCGTCCTCTaGGCGCGCTCGGGTCGGGCGCCGGTGACCGCTCGT +
Preference number: 6 (lower is better)
Translates to: AARGSAWLPAVL*ARSGRAPVTAR
Trigger: ACGAGCGGTCACCGGCGCCCGACCCGAGCGCGCCCAGAGGACGGCGGGGAGCCAAGCCGACCCCCGAGCAGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000572185.1
ENST00000671794.1
ENST00000672485.1
ENST00000673258.1
CDS TCA 72 bp CCGCCGTCCTCTGGGCGCGCTCGGGTCGGGCGCCGGTaGCCGCTCGTCTTCGCGGCGCTGCCAGATCGGGGT +
Preference number: 6 (lower is better)
Translates to: PPSSGRARVGRR*PLVFAALPDRG
Trigger: ACCCCGATCTGGCAGCGCCGCGAAGACGAGCGGTCACCGGCGCCCGACCCGAGCGCGCCCAGAGGACGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572185.1
ENST00000673258.1
CDS TCA 72 bp CACGGCAGCCAGCCACCGCCTGGTACAGGTGCAGTGTaGGCGCGGCTACGTGGCCACCTGCCTGGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: HGSQPPPGTGAV*ARLRGHLPGCP
Trigger: TGGGCAGCCAGGCAGGTGGCCACGTAGCCGCGCTCACACTGCACCTGTACCAGGCGGTGGCTGGCTGCCGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570996.5
ENST00000672485.1
CDS GCA 72 bp CCTGGCTGCCACCACCCCTCCCAAACTGCAGCTCCTTaGTGGGAGGGCCGTGGCCGGGCGAAGATGAGGCCC +
Preference number: 6 (lower is better)
Translates to: PGCHHPSQTAAP*WEGRGRAKMRP
Trigger: GGGCCTCATCTTCGCCCGGCCACGGCCCTCCCAGCAAGGAGCTGCAGTTTGGGAGGGGTGGTGGCAGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS GCA 72 bp CGCTCCTCCCATAGCACTTTGCCCAGGCGCCAGCGGTaGCAACGCCGCCGCAGCTCCGACTGCACCTCCTTG +
Preference number: 6 (lower is better)
Translates to: RSSHSTLPRRQR*QRRRSSDCTSL
Trigger: CAAGGAGGTGCAGTCGGAGCTGCGGCGGCGTTGGCACCGCTGGCGCCTGGGCAAAGTGCTATGGGAGGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS CAA 90 bp GATGAGGCCCTGTGGTTGCTGGTGTTCCGCTCCTCCCATAGCACTTaGCCCAGGCGCCAGCGGTGCCAACGCCGCCGCAGCTCCGACTGC +
Preference number: 6 (lower is better)
Translates to: DEALWLLVFRSSHST*PRRQRCQRRRSSDC
Trigger: GCAGTCGGAGCTGCGGCGGCGTTGGCACCGCTGGCGCCTGGGCAAAGTGCTATGGGAGGAGCGGAACACCAGCAACCACAGGGCCTCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS GCA 72 bp TGGGTGCCGGCTCCCTCCCAGCGCTCTCAGACAGGATaGTGCTGTCTCCTGGGGCAGCCTCAGGACGCCAAG +
Preference number: 6 (lower is better)
Translates to: WVPAPSQRSQTG*CCLLGQPQDAK
Trigger: CTTGGCGTCCTGAGGCTGCCCCAGGAGACAGCAGCATCCTGTCTGAGAGCGCTGGGAGGGAGCCGGCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571425.1
ENST00000672343.1
CDS CCA 72 bp GGCAGGGGCTGCACAGCTGGGGCAATGCAGTCCTGGTaGGTGTGTACGCTCCTCCGAGGGCAGCTGAGTGGC +
Preference number: 6 (lower is better)
Translates to: GRGCTAGAMQSW*VCTLLRGQLSG
Trigger: GCCACTCAGCTGCCCTCGGAGGAGCGTACACACCCACCAGGACTGCATTGCCCCAGCTGTGCAGCCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000572185.1
ENST00000573428.1
ENST00000671708.1
ENST00000671794.1
ENST00000672485.1
ENST00000673258.1
CDS CCA 72 bp ATGAACACCGCGGCCACACGGCAGCCAGCCACCGCCTaGTACAGGTGCAGTGTGAGCGCGGCTACGTGGCCA +
Preference number: 6 (lower is better)
Translates to: MNTAATRQPATA*YRCSVSAATWP
Trigger: TGGCCACGTAGCCGCGCTCACACTGCACCTGTACCAGGCGGTGGCTGGCTGCCGTGTGGCCGCGGTGTTCAT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570996.5
ENST00000672485.1
CDS CAA 72 bp CTGTGGTTGCTGGTGTTCCGCTCCTCCCATAGCACTTaGCCCAGGCGCCAGCGGTGCCAACGCCGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: LWLLVFRSSHST*PRRQRCQRRRS
Trigger: GCTGCGGCGGCGTTGGCACCGCTGGCGCCTGGGCAAAGTGCTATGGGAGGAGCGGAACACCAGCAACCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS CAA 90 bp TCCTTGCTGGGAGGGCCGTGGCCGGGCGAAGATGAGGCCCTGTGGTaGCTGGTGTTCCGCTCCTCCCATAGCACTTTGCCCAGGCGCCAG +
Preference number: 6 (lower is better)
Translates to: SLLGGPWPGEDEALW*LVFRSSHSTLPRRQ
Trigger: CTGGCGCCTGGGCAAAGTGCTATGGGAGGAGCGGAACACCAGCAACCACAGGGCCTCATCTTCGCCCGGCCACGGCCCTCCCAGCAAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS GCA 72 bp TGTGGTTGCTGGTGTTCCGCTCCTCCCATAGCACTTTaGCCAGGCGCCAGCGGTGCCAACGCCGCCGCAGCT +
Preference number: 6 (lower is better)
Translates to: CGCWCSAPPIAL*PGASGANAAAA
Trigger: AGCTGCGGCGGCGTTGGCACCGCTGGCGCCTGGGCAAAGTGCTATGGGAGGAGCGGAACACCAGCAACCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS GCA 72 bp CAGGGTGCTGGCCAGTGTCCTGGTGTCCTGTCTGGGTaGCGGCTCCCTCCCAGCGCTCTCAGACAGGATGCT +
Preference number: 6 (lower is better)
Translates to: QGAGQCPGVLSG*RLPPSALRQDA
Trigger: AGCATCCTGTCTGAGAGCGCTGGGAGGGAGCCGGCACCCAGACAGGACACCAGGACACTGGCCAGCACCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571425.1
ENST00000672343.1
CDS CCA 72 bp GGCCGTGGCCGGGCGAAGATGAGGCCCTGTGGTTGCTaGTGTTCCGCTCCTCCCATAGCACTTTGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: GRGRAKMRPCGC*CSAPPIALCPG
Trigger: GCCTGGGCAAAGTGCTATGGGAGGAGCGGAACACCAGCAACCACAGGGCCTCATCTTCGCCCGGCCACGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS CAA 72 bp GGAGGGCCGTGGCCGGGCGAAGATGAGGCCCTGTGGTaGCTGGTGTTCCGCTCCTCCCATAGCACTTTGCCC +
Preference number: 6 (lower is better)
Translates to: GGPWPGEDEALW*LVFRSSHSTLP
Trigger: GGGCAAAGTGCTATGGGAGGAGCGGAACACCAGCAACCACAGGGCCTCATCTTCGCCCGGCCACGGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS CAA 90 bp GCAGATGAATCCTGGCTGCCACCACCCCTCCCAAACTGCAGCTCCTaGCTGGGAGGGCCGTGGCCGGGCGAAGATGAGGCCCTGTGGTTG +
Preference number: 6 (lower is better)
Translates to: ADESWLPPPLPNCSS*LGGPWPGEDEALWL
Trigger: CAACCACAGGGCCTCATCTTCGCCCGGCCACGGCCCTCCCAGCAAGGAGCTGCAGTTTGGGAGGGGTGGTGGCAGCCAGGATTCATCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS GCA 72 bp AAGAAGAGCTTGGCGGAGCGCAGGGTGCCCTGGGCGTaGTCGTCCGTCACGAAGGCGAAGACCACTTCGTGG +
Preference number: 6 (lower is better)
Translates to: KKSLAERRVPWA*SSVTKAKTTSW
Trigger: CCACGAAGTGGTCTTCGCCTTCGTGACGGACGAGCACGCCCAGGGCACCCTGCGCTCCGCCAAGCTCTTCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS GCA 72 bp GAGGGCCGTGGCCGGGCGAAGATGAGGCCCTGTGGTTaGTGGTGTTCCGCTCCTCCCATAGCACTTTGCCCA +
Preference number: 6 (lower is better)
Translates to: EGRGRAKMRPCG*WCSAPPIALCP
Trigger: TGGGCAAAGTGCTATGGGAGGAGCGGAACACCAGCAACCACAGGGCCTCATCTTCGCCCGGCCACGGCCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS CCA 72 bp CTGGGAGGGCCGTGGCCGGGCGAAGATGAGGCCCTGTaGTTGCTGGTGTTCCGCTCCTCCCATAGCACTTTG +
Preference number: 6 (lower is better)
Translates to: LGGPWPGEDEAL*LLVFRSSHSTL
Trigger: CAAAGTGCTATGGGAGGAGCGGAACACCAGCAACCACAGGGCCTCATCTTCGCCCGGCCACGGCCCTCCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS CAA 72 bp GCTCCCAGGGCGTCCGCAAGGGGCCTCTCAGACGCTTaGAGGAGCTCCGGGATGGGAGCCGGGATGTTTTTG +
Preference number: 6 (lower is better)
Translates to: APRASARGLSDA*RSSGMGAGMFL
Trigger: CAAAAACATCCCGGCTCCCATCCCGGAGCTCCTCAAAGCGTCTGAGAGGCCCCTTGCGGACGCCCTGGGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573428.1
ENST00000671708.1
CDS TCA 72 bp TCTAGGGAGGCCACCAGCCAAGGGGGTCTCCGCAGATaGATCCTGGCTGCCACCACCCCTCCCAAACTGCAG +
Preference number: 6 (lower is better)
Translates to: SREATSQGGLRR*ILAATTPPKLQ
Trigger: CTGCAGTTTGGGAGGGGTGGTGGCAGCCAGGATTCATCTGCGGAGACCCCCTTGGCTGGTGGCCTCCCTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS TCA 72 bp CTCCCAGGGCGTCCGCAAGGGGCCTCTCAGACGCTTTaGGGAGCTCCGGGATGGGAGCCGGGATGTTTTTGT +
Preference number: 6 (lower is better)
Translates to: LPGRPQGASQTL*GAPGWEPGCFC
Trigger: ACAAAAACATCCCGGCTCCCATCCCGGAGCTCCTCAAAGCGTCTGAGAGGCCCCTTGCGGACGCCCTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573428.1
ENST00000671708.1
CDS CCA 72 bp GCCAAGGCAGGTACCAGGGGCAGGAGATGTTGGCCGTaGTATTGGCGGGGGTGTCCGGCCAGCAGGAATACT +
Preference number: 6 (lower is better)
Translates to: AKAGTRGRRCWP*YWRGCPASRNT
Trigger: AGTATTCCTGCTGGCCGGACACCCCCGCCAATACCACGGCCAACATCTCCTGCCCCTGGTACCTGCCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000574283.2
ENST00000671794.1
ENST00000672485.1
ENST00000672538.1
CDS CAA 72 bp GGCAGGTACCAGGGGCAGGAGATGTTGGCCGTGGTATaGGCGGGGGTGTCCGGCCAGCAGGAATACTTGTCG +
Preference number: 6 (lower is better)
Translates to: GRYQGQEMLAVV*AGVSGQQEYLS
Trigger: CGACAAGTATTCCTGCTGGCCGGACACCCCCGCCAATACCACGGCCAACATCTCCTGCCCCTGGTACCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000574283.2
ENST00000671794.1
ENST00000672485.1
ENST00000672538.1
CDS CAA 90 bp ATGTTGGCCGTGGTATTGGCGGGGGTGTCCGGCCAGCAGGAATACTaGTCGAAGGTTCTGTTGCACACCAGCTCCGTGGGAGGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: MLAVVLAGVSGQQEY*SKVLLHTSSVGGGS
Trigger: GCTGCCCCCTCCCACGGAGCTGGTGTGCAACAGAACCTTCGACAAGTATTCCTGCTGGCCGGACACCCCCGCCAATACCACGGCCAACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000573428.1
ENST00000671708.1
ENST00000671794.1
ENST00000672485.1
CDS GCA 72 bp CAGCCGGAACTTGTAGTCTGTGTGGTGCATCTGCCGTaGCCGCAGCTTGGCCACGAGCAGCTGAACGATGCG +
Preference number: 6 (lower is better)
Translates to: QPELVVCVVHLP*PQLGHEQLNDA
Trigger: CGCATCGTTCAGCTGCTCGTGGCCAAGCTGCGGGCACGGCAGATGCACCACACAGACTACAAGTTCCGGCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS GCA 72 bp CCAAAGGCTTGGTCAGCCTGCCTTAACCCCCTCTCATaGCAGCCCACTCACCCCAGCCGATGCCCAGGTAGA +
Preference number: 6 (lower is better)
Translates to: PKAWSACLNPLS*QPTHPSRCPGR
Trigger: TCTACCTGGGCATCGGCTGGGGTGAGTGGGCTGGCATGAGAGGGGGTTAAGGCAGGCTGACCAAGCCTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571425.1
ENST00000672343.1
CDS CCA 72 bp GCAGGTACCAGGGGCAGGAGATGTTGGCCGTGGTATTaGCGGGGGTGTCCGGCCAGCAGGAATACTTGTCGA +
Preference number: 6 (lower is better)
Translates to: AGTRGRRCWPWY*RGCPASRNTCR
Trigger: TCGACAAGTATTCCTGCTGGCCGGACACCCCCGCCAATACCACGGCCAACATCTCCTGCCCCTGGTACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000574283.2
ENST00000671794.1
ENST00000672485.1
ENST00000672538.1
CDS CCA 72 bp GGGGTGCGCTCCTGGCTCTTCATTTCCTCACCAGGATaGCCAGGAAGACGGGGAACCGCAGGATCCACCAGA +
Preference number: 6 (lower is better)
Translates to: GVRSWLFISSPG*PGRRGTAGSTR
Trigger: TCTGGTGGATCCTGCGGTTCCCCGTCTTCCTGGCCATCCTGGTGAGGAAATGAAGAGCCAGGAGCGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571425.1
ENST00000672343.1
CDS CAA 72 bp GTGTCCGGCCAGCAGGAATACTTGTCGAAGGTTCTGTaGCACACCAGCTCCGTGGGAGGGGGCAGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: VSGQQEYLSKVL*HTSSVGGGSRL
Trigger: GAGCCTGCTGCCCCCTCCCACGGAGCTGGTGTGCAACAGAACCTTCGACAAGTATTCCTGCTGGCCGGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000573428.1
ENST00000671708.1
ENST00000671794.1
ENST00000672485.1
CDS CAA 72 bp GTGTCCGGCCAGCAGGAATACTTGTCGAAGGTTCTGTaGCACACCAGCTCTGCCCACGGTGGTGGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: VSGQQEYLSKVL*HTSSAHGGGGL
Trigger: CAGGCCCCCACCACCGTGGGCAGAGCTGGTGTGCAACAGAACCTTCGACAAGTATTCCTGCTGGCCGGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574283.2
ENST00000672538.1
CDS CAA 90 bp ATGTTGGCCGTGGTATTGGCGGGGGTGTCCGGCCAGCAGGAATACTaGTCGAAGGTTCTGTTGCACACCAGCTCTGCCCACGGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: MLAVVLAGVSGQQEY*SKVLLHTSSAHGGG
Trigger: CCCACCACCGTGGGCAGAGCTGGTGTGCAACAGAACCTTCGACAAGTATTCCTGCTGGCCGGACACCCCCGCCAATACCACGGCCAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574283.2
ENST00000672538.1
CDS GCA 72 bp TGTCCGGCCAGCAGGAATACTTGTCGAAGGTTCTGTTaGACACCAGCTCCGTGGGAGGGGGCAGCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: CPASRNTCRRFC*TPAPWEGAAGS
Trigger: TGAGCCTGCTGCCCCCTCCCACGGAGCTGGTGTGCAACAGAACCTTCGACAAGTATTCCTGCTGGCCGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000573428.1
ENST00000671708.1
ENST00000671794.1
ENST00000672485.1
CDS GCA 72 bp CCAGCACTGGACGTTCTCGAACAGACACTTGACCACTaGCCAGGGGACGACGAACAGCATGGGGGCACCTGT +
Preference number: 6 (lower is better)
Translates to: PALDVLEQTLDH*PGDDEQHGGTC
Trigger: ACAGGTGCCCCCATGCTGTTCGTCGTCCCCTGGGCAGTGGTCAAGTGTCTGTTCGAGAACGTCCAGTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571425.1
ENST00000672343.1
CDS GCA 72 bp ACCTGGAAGCTGCTGTACATCTTGGCCACCTCCTTCTaGGAGTTACAGTGGCCTGTGAGGGCCAGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: TWKLLYILATSF*ELQWPVRARQG
Trigger: CCCCTGCCTGGCCCTCACAGGCCACTGTAACTCGCAGAAGGAGGTGGCCAAGATGTACAGCAGCTTCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574283.2
ENST00000672538.1
CDS CCA 72 bp CCGGTTCTGGGGCAATGCCACCGTTCTGTTATTTCCTaGCTCTGCGGCCTGAGGCAAGTCCCCAGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: PVLGQCHRSVIS*LCGLRQVPSSV
Trigger: CACAGAGCTGGGGACTTGCCTCAGGCCGCAGAGCCAGGAAATAACAGAACGGTGGCATTGCCCCAGAACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572185.1
ENST00000673258.1
CDS TCA 72 bp GGTCCCAGCTTCCACGCCCTGGCACTGTCTGCCCACTaGAAACTCCACGGGGCTGTAGGTGGTATTACCCAT +
Preference number: 6 (lower is better)
Translates to: GPSFHALALSAH*KLHGAVGGITH
Trigger: ATGGGTAATACCACCTACAGCCCCGTGGAGTTTTCAGTGGGCAGACAGTGCCAGGGCGTGGAAGCTGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572185.1
ENST00000673258.1
CDS CAA 72 bp GTGGTATTGGCGGGGGTGTCCGGCCAGCAGGAATACTaGTCGAAGGTTCTGTTGCACACCAGCTCCGTGGGA +
Preference number: 6 (lower is better)
Translates to: VVLAGVSGQQEY*SKVLLHTSSVG
Trigger: TCCCACGGAGCTGGTGTGCAACAGAACCTTCGACAAGTATTCCTGCTGGCCGGACACCCCCGCCAATACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000573428.1
ENST00000671708.1
ENST00000671794.1
ENST00000672485.1
CDS CAA 72 bp TTGCTGGTCCAGCACTGGACGTTCTCGAACAGACACTaGACCACTGCCCAGGGGACGACGAACAGCATGGGG +
Preference number: 6 (lower is better)
Translates to: LLVQHWTFSNRH*TTAQGTTNSMG
Trigger: CCCCATGCTGTTCGTCGTCCCCTGGGCAGTGGTCAAGTGTCTGTTCGAGAACGTCCAGTGCTGGACCAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000571425.1
ENST00000671794.1
ENST00000672343.1
ENST00000672485.1
CDS CAA 72 bp GTGGTATTGGCGGGGGTGTCCGGCCAGCAGGAATACTaGTCGAAGGTTCTGTTGCACACCAGCTCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: VVLAGVSGQQEY*SKVLLHTSSAH
Trigger: GTGGGCAGAGCTGGTGTGCAACAGAACCTTCGACAAGTATTCCTGCTGGCCGGACACCCCCGCCAATACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574283.2
ENST00000672538.1
CDS CAA 90 bp ATGTTGTCATTGCTGGTCCAGCACTGGACGTTCTCGAACAGACACTaGACCACTGCCCAGGGGACGACGAACAGCATGGGGGCACCTGTG +
Preference number: 6 (lower is better)
Translates to: MLSLLVQHWTFSNRH*TTAQGTTNSMGAPV
Trigger: CACAGGTGCCCCCATGCTGTTCGTCGTCCCCTGGGCAGTGGTCAAGTGTCTGTTCGAGAACGTCCAGTGCTGGACCAGCAATGACAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571425.1
ENST00000672343.1
CDS GCA 72 bp GGAATGACAGGGCCCCTTGGCGGGGTCCTCAAAGGCTaGATAAGCACCCAGGAACCTTCCCATGAAGAGAAC +
Preference number: 6 (lower is better)
Translates to: GMTGPLGGVLKG*ISTQEPSHEEN
Trigger: GTTCTCTTCATGGGAAGGTTCCTGGGTGCTTATGCAGCCTTTGAGGACCCCGCCAAGGGGCCCTGTCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572185.1
ENST00000574283.2
ENST00000672538.1
ENST00000673258.1
CDS CAA 72 bp GGGAACCGCAGGATCCACCAGAAGCCCATGTTGTCATaGCTGGTCCAGCACTGGACGTTCTCGAACAGACAC +
Preference number: 6 (lower is better)
Translates to: GNRRIHQKPMLS*LVQHWTFSNRH
Trigger: GTGTCTGTTCGAGAACGTCCAGTGCTGGACCAGCAATGACAACATGGGCTTCTGGTGGATCCTGCGGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000571425.1
ENST00000671794.1
ENST00000672343.1
ENST00000672485.1
CDS CAA 72 bp AAGACGGGGAACCGCAGGATCCACCAGAAGCCCATGTaGTCATTGCTGGTCCAGCACTGGACGTTCTCGAAC +
Preference number: 6 (lower is better)
Translates to: KTGNRRIHQKPM*SLLVQHWTFSN
Trigger: GTTCGAGAACGTCCAGTGCTGGACCAGCAATGACAACATGGGCTTCTGGTGGATCCTGCGGTTCCCCGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000571425.1
ENST00000671794.1
ENST00000672343.1
ENST00000672485.1
CDS CAA 72 bp CCCACTGTGTACATCACCTGGAAGCTGCTGTACATCTaGGCCACCTCCTTCTGGACCTCAATCTCCTCGCCA +
Preference number: 6 (lower is better)
Translates to: PTVYITWKLLYI*ATSFWTSISSP
Trigger: TGGCGAGGAGATTGAGGTCCAGAAGGAGGTGGCCAAGATGTACAGCAGCTTCCAGGTGATGTACACAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS CAA 72 bp CCCACTGTGTACATCACCTGGAAGCTGCTGTACATCTaGGCCACCTCCTTCTGCGAGTTACAGTGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: PTVYITWKLLYI*ATSFCELQWPV
Trigger: CACAGGCCACTGTAACTCGCAGAAGGAGGTGGCCAAGATGTACAGCAGCTTCCAGGTGATGTACACAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574283.2
ENST00000672538.1
CDS GCA 72 bp ACAGGCTGTAGCCCACTGTGTACATCACCTGGAAGCTaGTGTACATCTTGGCCACCTCCTTCTGGACCTCAA +
Preference number: 6 (lower is better)
Translates to: TGCSPLCTSPGS*CTSWPPPSGPQ
Trigger: TTGAGGTCCAGAAGGAGGTGGCCAAGATGTACAGCAGCTTCCAGGTGATGTACACAGTGGGCTACAGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1
CDS GCA 72 bp ACAGGCTGTAGCCCACTGTGTACATCACCTGGAAGCTaGTGTACATCTTGGCCACCTCCTTCTGCGAGTTAC +
Preference number: 6 (lower is better)
Translates to: TGCSPLCTSPGS*CTSWPPPSASY
Trigger: GTAACTCGCAGAAGGAGGTGGCCAAGATGTACAGCAGCTTCCAGGTGATGTACACAGTGGGCTACAGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574283.2
ENST00000672538.1
CDS CCA 72 bp CCACTGTGTACATCACCTGGAAGCTGCTGTACATCTTaGCCACCTCCTTCTGGACCTCAATCTCCTCGCCAT +
Preference number: 6 (lower is better)
Translates to: PLCTSPGSCCTS*PPPSGPQSPRH
Trigger: ATGGCGAGGAGATTGAGGTCCAGAAGGAGGTGGCCAAGATGTACAGCAGCTTCCAGGTGATGTACACAGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400723.8
ENST00000570996.5
ENST00000671794.1
ENST00000672485.1