RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GCC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000179562

Ensembl transcript IDs: ENST00000321407.3, ENST00000497650.1

Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACTTCCTGGTCCCTTTCCAGCCTGGTTTTATGTCCCCAGAGAATTaGGGTAGCAATGGACCAGACTCAGACTGTGATGAGAGGGAGAAA +
Preference number: 1 (lower is better)
Translates to: NFLVPFQPGFMSPEN*GSNGPDSDCDEREK
Trigger: TTTCTCCCTCTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGGGGACATAAAACCAGGCTGGAAAGGGACCAGGAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR CCA 90 bp AGAAAGGTCTATTTTAACCCTATCCAGGCAAAAAGCAGGTTACTTTaGAAATCCCTAAGATCAAGCTGGTGCTCAGGGCCCTCTCTAGGA +
Preference number: 1 (lower is better)
Translates to: RKVYFNPIQAKSRLL*KSLRSSWCSGPSLG
Trigger: TCCTAGAGAGGGCCCTGAGCACCAGCTTGATCTTAGGGATTTCCAAAGTAACCTGCTTTTTGCCTGGATAGGGTTAAAATAGACCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR TCA 90 bp CTCTGTAAGAAGCTAGGACTTTATTTCTTAATGAAAGTTCAACACTaGGGAAAAGATAGCAAAGTCGTTGACTCACAATCTCAGGCCAAC +
Preference number: 1 (lower is better)
Translates to: LCKKLGLYFLMKVQH*GKDSKVVDSQSQAN
Trigger: GTTGGCCTGAGATTGTGAGTCAACGACTTTGCTATCTTTTCCTCAGTGTTGAACTTTCATTAAGAAATAAAGTCCTAGCTTCTTACAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR CCA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCAGCATTAATGGCATTTaGCAGAAAATCCCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPSINGI*QKIPSH
Trigger: GTGGGAAGGGATTTTCTGCCAAATGCCATTAATGCT...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR TCA 90 bp CCAGAGAATTGGGGTAGCAATGGACCAGACTCAGACTGTGATGAGAGGGAGAAAATTTCAGAGATTAACTaGACTCCCTTTGGAGTCACA +
Preference number: 2 (lower is better)
Translates to: PENWGSNGPDSDCDEREKISEIN*TPFGVT
Trigger: TGTGACTCCAAAGGGAGTTCAGTTAATCTCTGAAAT...TTTCTCCCTCTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR GCA 90 bp ACACATAAACTTCTGTTCCATTTAAGTCTGCTCACTGTAGATAATCCAGGTCACCATAAGCGGTGTGATTaGATAGGTCATCCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: THKLLFHLSLLTVDNPGHHKRCD*IGHPQA
Trigger: TGCCTGGGGATGACCTATGCAATCACACCGCTTATG...GTGACCTGGATTATCTACAGTGAGCAGACTTAAATGGAACAGAAGTTTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR GCA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCACTAAGATCAAGCTGGTaGTCAGGGCCCTCTCTAGGA +
Preference number: 2 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPLRSSW*SGPSLG
Trigger: TCCTAGAGAGGGCCCTGAGCACCAGCTTGATCTTAG...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR CCA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCATCCCTAAGATCAAGCTaGTGCTCAGGGCCCTCTCTA +
Preference number: 2 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPSLRSS*CSGPSL
Trigger: TAGAGAGGGCCCTGAGCACCAGCTTGATCTTAGGGA...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR GCA 90 bp ACACATAAACTTCTGTTCCATTTAAGTCTGCTCACTGTAGATAATCCAGGTCACGGATTAATCTACTTATaGCAAGACCCACTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: THKLLFHLSLLTVDNPGHGLIYL*QDPLGR
Trigger: TCTGCCCAGTGGGTCTTGGCATAAGTAGATTAATCC...GTGACCTGGATTATCTACAGTGAGCAGACTTAAATGGAACAGAAGTTTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR TCA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCACAACCCAGGTTTAGCTaGTCTTTACCACTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPQPRFS*SLPLPC
Trigger: ACAGGGAAGTGGTAAAGATCAGCTAAACCTGGGTTG...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR GCA 90 bp TCAAGTCACTCAGGTTTAATGATTCCATCATTTGGACACATAAACTTCTGTTCCCATCTTCTCCTCACATaGACACCATCAGAAGATACT +
Preference number: 2 (lower is better)
Translates to: SSHSGLMIPSFGHINFCSHLLLT*TPSEDT
Trigger: AGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATG...GGAACAGAAGTTTATGTGTCCAAATGATGGAATCATTAAACCTGAGTGACTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR GCA 90 bp CCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCACTGGGCAGATTACTCCTAGCTTTGTaGCAGGAGCATATTATTAAA +
Preference number: 2 (lower is better)
Translates to: PFLKRAGLIYLCQDPLGRLLLAL*QEHIIK
Trigger: TTTAATAATATGCTCCTGGCACAAAGCTAGGAGTAA...TCTGCCCAGTGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR CCA 72 bp GTCCCTTTCCAGCCTGGTTTTATGTCCCCAGAGAATTaGGGTAGCAATGGACCAGACTCAGACTGTGATGAG +
Preference number: 3 (lower is better)
Translates to: VPFQPGFMSPEN*GSNGPDSDCDE
Trigger: CTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGGGGACATAAAACCAGGCTGGAAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR CAA 90 bp TCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCAAATCCCTTCCCACATaGAAGACTCCTCCCAGCTCA +
Preference number: 3 (lower is better)
Translates to: SSPHMHTIRRYCPRTFSIKSLPT*KTPPSS
Trigger: TGAGCTGGGAGGAGTCTTCAATGTGGGAAGGGATTT...GATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR TCA 72 bp GTCCCTACAAAGGCAGAAAAGCTAGGGGCCAATCTCTaGGCTAATTCCTTGAATCCAGGCAGGATGAGCATT +
Preference number: 3 (lower is better)
Translates to: VPTKAEKLGANL*ANSLNPGRMSI
Trigger: AATGCTCATCCTGCCTGGATTCAAGGAATTAGCTCAGAGATTGGCCCCTAGCTTTTCTGCCTTTGTAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR CAA 90 bp GGTCATAAGCGGTGTGATTGCATAGGTCATCCCCAGGCACTAATTAGACTAAGCTTAACTGAACTCCCTTaGGAGTCACATTTACTCCTA +
Preference number: 3 (lower is better)
Translates to: GHKRCDCIGHPQALIRLSLTELP*ESHLLL
Trigger: TAGGAGTAAATGTGACTCCAAAGGGAGTTCAGTTAA...GCTTAGTCTAATTAGTGCCTGGGGATGACCTATGCAATCACACCGCTTATGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR CAA 90 bp CCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGATAGCAAAGTCGTaGACTCACAATCTCAGGCCA +
Preference number: 3 (lower is better)
Translates to: PFLKRAGLIYLCQDPLGRKIAKS*THNLRP
Trigger: TGGCCTGAGATTGTGAGTCAACGACTTTGCTATCTT...TCTGCCCAGTGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR-3UTR CAA 90 bp CCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCACTGGGCAGAAGCTACAGCAATCTTTaGGAATTTTCTGCAGCAAAT +
Preference number: 3 (lower is better)
Translates to: PFLKRAGLIYLCQDPLGRSYSNL*EFSAAN
Trigger: ATTTGCTGCAGAAAATTCCAAAAGATTGCTGTAGCT...TCTGCCCAGTGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321407.3
3UTR TCA 72 bp AAGCTAGGACTTTATTTCTTAATGAAAGTTCAACACTaGGGAAAAGATAGCAAAGTCGTTGACTCACAATCT +
Preference number: 3 (lower is better)
Translates to: KLGLYFLMKVQH*GKDSKVVDSQS
Trigger: AGATTGTGAGTCAACGACTTTGCTATCTTTTCCTCAGTGTTGAACTTTCATTAAGAAATAAAGTCCTAGCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp GGTCATAAGCGGTGTGATTGCATAGGTCATCCCCAGGCACTAATTAGACTAAGCCACTCTCCGCTCGTCTaGGCCACAGCAGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GHKRCDCIGHPQALIRLSHSPLV*ATAARA
Trigger: GGCCCGGGCTGCTGTGGCCCAGACGAGCGGAGAGTG...GCTTAGTCTAATTAGTGCCTGGGGATGACCTATGCAATCACACCGCTTATGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp CTTCTGCACTTCTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAGAGGCGGGGCGACACTaGCACCAGAGGTGCGCACTG +
Preference number: 4 (lower is better)
Translates to: LLHFSVLTSSSPHMHTIREAGRH*HQRCAL
Trigger: CAGTGCGCACCTCTGGTGCCAGTGTCGCCCCGCCTC...TCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAGAAGTGCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp GTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGTCCCTGAAGTCCAGCTaGCACCGCTCCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLTSSSPHMHTIRRYCPRSLKSS*HRSSSC
Trigger: GCAGGAGCTGGAGCGGTGCCAGCTGGACTTCAGGGA...CCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp CCAGAGAATTGGGGTAGCAATGGACCAGACTCAGACTGTGATGAGAGGGAGAAACGGGCAGCCTCTTCCTaGAGTTCTTGCAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: PENWGSNGPDSDCDEREKRAASS*SSCSRG
Trigger: TCCCCGGCTGCAAGAACTTCAGGAAGAGGCTGCCCG...TTTCTCCCTCTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp CCAGAGAATTGGGGTAGCAATGGACCAGACTCAGACTGTGATGAGAGGGAGAAAAGCCGATCCTGCAGCTaGTGCACCTCGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PENWGSNGPDSDCDEREKSRSCS*CTSTSS
Trigger: GCTGGAGGTCGAGGTGCATCAGCTGCAGGATCGGCT...TTTCTCCCTCTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGTGGAAGCTGGACACCTaGGAGGCCCACATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VLTSSSPHMHTIRRYCPRWKLDT*EAHICL
Trigger: GAGGCAGATGTGGGCCTCGCAGGTGTCCAGCTTCCA...CCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp CCAGAGAATTGGGGTAGCAATGGACCAGACTCAGACTGTGATGAGAGGGAGAAAGTGAGGCCTGGAAGCTaGACACCTGCGAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: PENWGSNGPDSDCDEREKVRPGS*TPARPT
Trigger: TGTGGGCCTCGCAGGTGTCCAGCTTCCAGGCCTCAC...TTTCTCCCTCTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp CCAGAGAATTGGGGTAGCAATGGACCAGACTCAGACTGTGATGAGAGGGAGAAAGGACTTTGGAGGTGGTaGTCCACGGGCCGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: PENWGSNGPDSDCDEREKGLWRW*STGRSV
Trigger: GACAGACCGGCCCGTGGACCACCACCTCCAAAGTCC...TTTCTCCCTCTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCGCCTCCTGCTGGTGTTaGTGCTCCAGCTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPASCWC*CSSSSQ
Trigger: CTGCGAGGAGCTGGAGCACCAACACCAGCAGGAGGC...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp TCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCGCCAGAGGGTTACGCTaGGCTCGGTCCCATCACGAC +
Preference number: 4 (lower is better)
Translates to: SSPHMHTIRRYCPRTFSIARGLR*ARSHHD
Trigger: GTCGTGATGGGACCGAGCTCAGCGTAACCCTCTGGC...GATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp CCAGAGAATTGGGGTAGCAATGGACCAGACTCAGACTGTGATGAGAGGGAGAAACACCCTTGGTGCTGGTaGGACTGGCCGCAGTATCCA +
Preference number: 4 (lower is better)
Translates to: PENWGSNGPDSDCDEREKHPWCW*DWPQYP
Trigger: TGGATACTGCGGCCAGTCTCACCAGCACCAAGGGTG...TTTCTCCCTCTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp GTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGCAGGCTATCAGAGGATaGTGTGTCAGCTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: VLTSSSPHMHTIRRYCPRQAIRG*CVSWVP
Trigger: GGGGACCCAGCTGACACATCATCCTCTGATAGCCTG...CCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp CTTCTGCACTTCTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGCCGGGCCAGCTCCTaGTTCCAGTCATCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLHFSVLTSSSPHMHTIRSRASS*FQSSAS
Trigger: GGAGGCTGATGACTGGAAGCAGGAGCTGGCCCGGCT...TCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAGAAGTGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp CTTCTGCACTTCTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGGGCACGATCCCGCTaGTTGTGCAGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLHFSVLTSSSPHMHTIRRARSR*LCSSSS
Trigger: GGAGGAGGAGCTGCACAAGCAGCGGGATCGTGCCCT...TCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAGAAGTGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp TCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCGTGGCTCTGCAGGGCTaGAACCTCCTCACGATGCCG +
Preference number: 4 (lower is better)
Translates to: SSPHMHTIRRYCPRTFSIVALQG*NLLTMP
Trigger: CGGCATCGTGAGGAGGTTGCAGCCCTGCAGAGCCAC...GATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp CTTCTGCACTTCTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAGGCCTCTTCGGACTTTaGAGGTGGTGGTCCACGGGC +
Preference number: 4 (lower is better)
Translates to: LLHFSVLTSSSPHMHTIRGLFGL*RWWSTG
Trigger: GCCCGTGGACCACCACCTCCAAAGTCCGAAGAGGCC...TCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAGAAGTGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp AGGCAGCAGAAACCAGAGCCTGCCCTTTCCCACATAAAAGAGGCACAGAAATTCCTAAGCTCCAAGTCCTaGCGCTGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RQQKPEPALSHIKEAQKFLSSKS*RWVLSS
Trigger: GGAGGAGAGGACCCAGCGCCAGGACTTGGAGCTTAG...GAATTTCTGTGCCTCTTTTATGTGGGAAAGGGCAGGCTCTGGTTTCTGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTCAGGACTTCTGCGTCCTaGCAGCCCAGAGGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: FSSHAHHQKILPQDFQYLRTSAS*QPRGQG
Trigger: GCCTTGGCCTCTGGGCTGCCAGGACGCAGAAGTCCT...GAGATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GGTCATAAGCGGTGTGATTGCATAGGTCATCCCCAGGCACTAATTAGACTAAGCCCAGCAAGTCCTTCTTaGTCGGGCCGCCCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: GHKRCDCIGHPQALIRLSPASPS*SGRPRN
Trigger: ATTTCGGGGGCGGCCCGAGCAAGAAGGACTTGCTGG...GCTTAGTCTAATTAGTGCCTGGGGATGACCTATGCAATCACACCGCTTATGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GGTCATAAGCGGTGTGATTGCATAGGTCATCCCCAGGCACTAATTAGACTAAGCTGCGAGGCCCACATCTaGCTCGTGGGATACCGACAG +
Preference number: 4 (lower is better)
Translates to: GHKRCDCIGHPQALIRLSCEAHI*LVGYRQ
Trigger: CTGTCGGTATCCCACGAGGCAGATGTGGGCCTCGCA...GCTTAGTCTAATTAGTGCCTGGGGATGACCTATGCAATCACACCGCTTATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp AGGCAGCAGAAACCAGAGCCTGCCCTTTCCCACATAAAAGAGGCACAGAAATTCGCCCGATCATGCTGCTaGGTGATAAGCCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RQQKPEPALSHIKEAQKFARSCC*VISRAL
Trigger: CAAAGCCCGGCTTATCACGCAGCAGCATGATCGGGC...GAATTTCTGTGCCTCTTTTATGTGGGAAAGGGCAGGCTCTGGTTTCTGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp TTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTCTGGGCCCGATCATGCTaGTGCGTGATAAGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: FSSHAHHQKILPQDFQYLWARSC*CVISRA
Trigger: AGCCCGGCTTATCACGCAGCAGCATGATCGGGCCCA...GAGATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp TTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTCTCCTGCTGGTGTTGGTaGTCCAGCTCCTCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FSSHAHHQKILPQDFQYLSCWCW*SSSSQE
Trigger: CTCCTGCGAGGAGCTGGAGCACCAACACCAGCAGGA...GAGATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GATACTGCCCCAGGACTTTCAGTATCTCTAGGGCCTAAGGATAAAGCAGCATTAGCAACCTCCTCACGATaGCGTTCGCCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DTAPGLSVSLGPKDKAALATSSR*RSPSSS
Trigger: GCTGGAGGAGGGCGAACGGCATCGTGAGGAGGTTGC...TAATGCTGCTTTATCCTTAGGCCCTAGAGATACTGAAAGTCCTGGGGCAGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTTCGGACTTTGGAGGTaGTGGTCCACGGGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: SSPHMHTIRRYCPRTFSIFGLWR*WSTGRS
Trigger: AGACCGGCCCGTGGACCACCACCTCCAAAGTCCGAA...GATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCGCAGCATCAAGGCATaGTCACTCTGCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPRSIKA*SLCSWA
Trigger: GGCCCAAGAGCAGAGTGACCATGCCTTGATGCTGCG...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp GGTCATAAGCGGTGTGATTGCATAGGTCATCCCCAGGCACTAATTAGACTAAGCTCACCTGGCTTTTCCTaGCCGCAACCTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GHKRCDCIGHPQALIRLSSPGFS*PQPAAA
Trigger: GGCTGCTGCAGGTTGCGGCCAGGAAAAGCCAGGTGA...GCTTAGTCTAATTAGTGCCTGGGGATGACCTATGCAATCACACCGCTTATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp GGAAAAGATAGCAAAGTCGTTGACTCACAATCTCAGGCCAACCTCAGGCAGATACACGGACCACATCCTTaGGCCGTGCCTGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: GKDSKVVDSQSQANLRQIHGPHP*AVPGTG
Trigger: TCCAGTACCAGGCACGGCTCAAGGATGTGGTCCGTG...TATCTGCCTGAGGTTGGCCTGAGATTGTGAGTCAACGACTTTGCTATCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCGACACCTCGGATATTTaGTTCTCCAGGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPDTSDI*FSRAAT
Trigger: GGTGGCAGCCCTGGAGAATCAAATATCCGAGGTGTC...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp TTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTCCGCTCCTTCAGCTTCTaGATGGCCAGCTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FSSHAHHQKILPQDFQYLRSFSF*MASWSF
Trigger: GAAGGACCAGCTGGCCATTCAGAAGCTGAAGGAGCG...GAGATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGCTAAGATCAAGCTGGTaGTCAGGGCCCTCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: VLTSSSPHMHTIRRYCPRLRSSW*SGPSLG
Trigger: TCCTAGAGAGGGCCCTGAGCACCAGCTTGATCTTAG...CCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCAGCCGTGCCTGGTACTaGAGAAGCTGCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPSRAWY*RSCFFW
Trigger: CCAGAAGAAGCAGCTTCTCCAGTACCAGGCACGGCT...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp GGTCATAAGCGGTGTGATTGCATAGGTCATCCCCAGGCACTAATTAGACTAAGCCCCACATCTGCCTCGTaGGATACCGACAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: GHKRCDCIGHPQALIRLSPTSAS*DTDSTL
Trigger: CAAGGTGCTGTCGGTATCCCACGAGGCAGATGTGGG...GCTTAGTCTAATTAGTGCCTGGGGATGACCTATGCAATCACACCGCTTATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCACATCCAGGGTCACCTaGCTTTTCCTGGCCGCAACC +
Preference number: 4 (lower is better)
Translates to: SSPHMHTIRRYCPRTFSITSRVT*LFLAAT
Trigger: GGTTGCGGCCAGGAAAAGCCAGGTGACCCTGGATGT...GATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGCACCCCAACCCAGGTTTACAGCAGCCTCCGAGCTaGGCATTATCTCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LIYLCQDPLGRKHPNPGLQQPPS*ALSPGH
Trigger: GTGACCTGGAGATAATGCCCAGCTCGGAGGCTGCTG...TAAACCTGGGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATAAGTAGATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp GATACTGCCCCAGGACTTTCAGTATCTCTAGGGCCTAAGGATAAAGCAGCATTATCTCCATGGAGGGTCTaGACGGATTGCCCCACGTCA +
Preference number: 4 (lower is better)
Translates to: DTAPGLSVSLGPKDKAALSPWRV*TDCPTS
Trigger: TGACGTGGGGCAATCCGTTCAGACCCTCCATGGAGA...TAATGCTGCTTTATCCTTAGGCCCTAGAGATACTGAAAGTCCTGGGGCAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp CCAGAGAATTGGGGTAGCAATGGACCAGACTCAGACTGTGATGAGAGGGAGAAAAGCCGGGGATCTGGCTaGTTCTTCTCATCTCGAATG +
Preference number: 4 (lower is better)
Translates to: PENWGSNGPDSDCDEREKSRGSG*FFSSRM
Trigger: CATTCGAGATGAGAAGAATCAGCCAGATCCCCGGCT...TTTCTCCCTCTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp CCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCACTGGGCAGATCAGTGTGCGGTCCCTaGAGTCCAGCTGGCACCGCT +
Preference number: 4 (lower is better)
Translates to: PFLKRAGLIYLCQDPLGRSVCGP*SPAGTA
Trigger: AGCGGTGCCAGCTGGACTTCAGGGACCGCACACTGA...TCTGCCCAGTGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp GATACTGCCCCAGGACTTTCAGTATCTCTAGGGCCTAAGGATAAAGCAGCATTACCAAGTCCTTCTCGGTaGGCACAGCTAGGGCACGAT +
Preference number: 4 (lower is better)
Translates to: DTAPGLSVSLGPKDKAALPSPSR*AQLGHD
Trigger: ATCGTGCCCTAGCTGTGCTCACCGAGAAGGACTTGG...TAATGCTGCTTTATCCTTAGGCCCTAGAGATACTGAAAGTCCTGGGGCAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp CTTCTGCACTTCTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGACCGGGCTTTGGTTTCTaGTATTTGCTCCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LLHFSVLTSSSPHMHTIRPGFGF*YLLLQP
Trigger: GGGCTGCAGGAGCAAATAGCAGAAACCAAAGCCCGG...TCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAGAAGTGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCTGTTCAGCTGCATATaGTCGTCCTGCCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPLFSCI*SSCQGF
Trigger: GAAGCCTTGGCAGGACGAGCATATGCAGCTGAACAG...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GGTCATAAGCGGTGTGATTGCATAGGTCATCCCCAGGCACTAATTAGACTAAGCTTCTCCAGGTCCAGCTaGAGAATGCGCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GHKRCDCIGHPQALIRLSFSRSS*RMRSFS
Trigger: GCTGAAGGAGCGCATTCTGCAGCTGGACCTGGAGAA...GCTTAGTCTAATTAGTGCCTGGGGATGACCTATGCAATCACACCGCTTATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp TCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTGTCTAAAGGGGACCTaGTGGAGGCTGCTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SSPHMHTIRRYCPRTFSICLKGT*WRLLEP
Trigger: TGGCTCTAGCAGCCTCCAGCAGGTCCCCTTTAGACA...GATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GATACTGCCCCAGGACTTTCAGTATCTCTAGGGCCTAAGGATAAAGCAGCATTATTCCTGGCCGCAACCTaGAGCAGCCTCTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DTAPGLSVSLGPKDKAALFLAAT*SSLFSF
Trigger: GAAGCTGAAGAGGCTGCTGCAGGTTGCGGCCAGGAA...TAATGCTGCTTTATCCTTAGGCCCTAGAGATACTGAAAGTCCTGGGGCAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GAAACCAGAGCCTGCCCTTTCCCACATAAAAGAGGCACAGAAATTCCAGGAATTCAGTCATCAGCCTCCTaGTGGTGTTGGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ETRACPFPHKRGTEIPGIQSSAS*WCWCSS
Trigger: GCTGGAGCACCAACACCAGCAGGAGGCTGATGACTG...AATTCCTGGAATTTCTGTGCCTCTTTTATGTGGGAAAGGGCAGGCTCTGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp TCAAGTCACTCAGGTTTAATGATTCCATCATTTGGACACATAAACTTCTGTTCCTCCTGCCGGTGGAGCTaGTGCAGCCGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSHSGLMIPSFGHINFCSSCRWS*CSRASS
Trigger: GGAGCTGGCCCGGCTGCAGCAGCTCCACCGGCAGGA...GGAACAGAAGTTTATGTGTCCAAATGATGGAATCATTAAACCTGAGTGACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GATACTGCCCCAGGACTTTCAGTATCTCTAGGGCCTAAGGATAAAGCAGCATTACGATCCCGCTGCTTGTaGAGCTCCTCCTCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: DTAPGLSVSLGPKDKAALRSRCL*SSSSSF
Trigger: GAAACTGGAGGAGGAGCTGCACAAGCAGCGGGATCG...TAATGCTGCTTTATCCTTAGGCCCTAGAGATACTGAAAGTCCTGGGGCAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTCTATCCTCGCTGTGAGTaGAGCACCGGTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: FSSHAHHQKILPQDFQYLYPRCE*STGHPQ
Trigger: CTGTGGATGACCGGTGCTCCACTCACAGCGAGGATA...GAGATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCGCTGGTCCTTCTGCTTaGCTTTCTCGTAGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPAGPSA*LSRRCL
Trigger: TAGGCACCTACGAGAAAGCCAAGCAGAAGGACCAGC...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp CCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCACTGGGCAGAGCTGTGAGAGTCTGCTaGCGGCCCAGGGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PFLKRAGLIYLCQDPLGRAVRVC*RPRESG
Trigger: ACCTGACTCCCTGGGCCGCCAGCAGACTCTCACAGC...TCTGCCCAGTGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp CTTCTGCACTTCTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAGCCACCAGCTGGCACTaGTTGGGAGTCGCATTATCA +
Preference number: 4 (lower is better)
Translates to: LLHFSVLTSSSPHMHTIRATSWH*LGVALS
Trigger: TGATAATGCGACTCCCAACCAGTGCCAGCTGGTGGC...TCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAGAAGTGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGTTCCATCTGTTCAGCTaGATATGCTCGTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: VLTSSSPHMHTIRRYCPRFHLFS*ICSSCQ
Trigger: TTGGCAGGACGAGCATATGCAGCTGAACAGATGGAA...CCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp TCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTGGCTTTCTCGTAGGTaGCTAGCAGCTCAGACACCT +
Preference number: 4 (lower is better)
Translates to: SSPHMHTIRRYCPRTFSIWLSRR*LAAQTP
Trigger: AGGTGTCTGAGCTGCTAGGCACCTACGAGAAAGCCA...GATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp CTTCTGCACTTCTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGATTTTCGATGTGGCTCTaGAGGGCTGCAACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLHFSVLTSSSPHMHTIRFSMWL*RAATSS
Trigger: TGAGGAGGTTGCAGCCCTGCAGAGCCACATCGAAAA...TCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAGAAGTGCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TATGATGAAATCACAGAAAGATACATATTAGTCCAGTTAGTGGCCAAACATTGGCCAGGCCCGGAGGGCTaGGGCGGATTCTACCCCGGA +
Preference number: 4 (lower is better)
Translates to: YDEITERYILVQLVAKHWPGPEG*GGFYPG
Trigger: TCCGGGGTAGAATCCGCCCCAGCCCTCCGGGCCTGG...CCAATGTTTGGCCACTAACTGGACTAATATGTATCTTTCTGTGATTTCATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TATGATGAAATCACAGAAAGATACATATTAGTCCAGTTAGTGGCCAAACATTGGAACGGCCGGACGGACTaGCGAAAGCGGCCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: YDEITERYILVQLVAKHWNGRTD*RKRPPG
Trigger: ACCGGGCGGCCGCTTTCGCCAGTCCGTCCGGCCGTT...CCAATGTTTGGCCACTAACTGGACTAATATGTATCTTTCTGTGATTTCATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGCACCCCAACCCAGGTTTACCAGCTGGCACTGGTTaGGAGTCGCATTATCACTTG +
Preference number: 4 (lower is better)
Translates to: LIYLCQDPLGRKHPNPGLPAGTG*ESHYHL
Trigger: CAAGTGATAATGCGACTCCCAACCAGTGCCAGCTGG...TAAACCTGGGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATAAGTAGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp GGAAAAGATAGCAAAGTCGTTGACTCACAATCTCAGGCCAACCTCAGGCAGATATATGCCAAGACCCACTaGGCAGAAAGCACCCCAACC +
Preference number: 4 (lower is better)
Translates to: GKDSKVVDSQSQANLRQIYAKTH*AESTPT
Trigger: GGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATA...TATCTGCCTGAGGTTGGCCTGAGATTGTGAGTCAACGACTTTGCTATCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp TATGATGAAATCACAGAAAGATACATATTAGTCCAGTTAGTGGCCAAACATTGGAACGGGAGAGGGCCGTaGAGACGCAGGCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: YDEITERYILVQLVAKHWNGRGP*RRRRGL
Trigger: AAGCCCCCGCCTGCGTCTTCACGGCCCTCTCCCGTT...CCAATGTTTGGCCACTAACTGGACTAATATGTATCTTTCTGTGATTTCATCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp CCAGAGAATTGGGGTAGCAATGGACCAGACTCAGACTGTGATGAGAGGGAGAAACTAGGGGCCAATCTCTaGGCTAATTCCTTGAATCCA +
Preference number: 4 (lower is better)
Translates to: PENWGSNGPDSDCDEREKLGANL*ANSLNP
Trigger: TGGATTCAAGGAATTAGCTCAGAGATTGGCCCCTAG...TTTCTCCCTCTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp CCAGAGAATTGGGGTAGCAATGGACCAGACTCAGACTGTGATGAGAGGGAGAAACAACCCAGGTTTAGCTaGTCTTTACCACTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PENWGSNGPDSDCDEREKQPRFS*SLPLPC
Trigger: ACAGGGAAGTGGTAAAGATCAGCTAAACCTGGGTTG...TTTCTCCCTCTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp ACATCTTATTTTAAAACAGCCTTACCACTGTTCCAACTTCTGCACTTCTCAGTCACCAGAGGTGCGCACTaGCAGGGCTCGTTAGCGCTG +
Preference number: 4 (lower is better)
Translates to: TSYFKTALPLFQLLHFSVTRGAH*QGSLAL
Trigger: CAGCGCTAACGAGCCCTGGCAGTGCGCACCTCTGGT...GACTGAGAAGTGCAGAAGTTGGAACAGTGGTAAGGCTGTTTTAAAATAAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp TTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTCTCTGCTATTTGCTCCTaGAGCCCCTTCAATTCTCCC +
Preference number: 4 (lower is better)
Translates to: FSSHAHHQKILPQDFQYLSAICS*SPFNSP
Trigger: GGGAGAATTGAAGGGGCTGCAGGAGCAAATAGCAGA...GAGATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp TTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGCACCCCAACCCAGGTTTACATAAGCGGTGTGATTaGATAGGTCATCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LIYLCQDPLGRKHPNPGLHKRCD*IGHPQA
Trigger: TGCCTGGGGATGACCTATGCAATCACACCGCTTATG...TAAACCTGGGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATAAGTAGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp GGAAAAGATAGCAAAGTCGTTGACTCACAATCTCAGGCCAACCTCAGGCAGATATTGCAGCCGGGGATCTaGCTGATTCTTCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: GKDSKVVDSQSQANLRQILQPGI*LILLIS
Trigger: CGAGATGAGAAGAATCAGCCAGATCCCCGGCTGCAA...TATCTGCCTGAGGTTGGCCTGAGATTGTGAGTCAACGACTTTGCTATCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp GAAACCAGAGCCTGCCCTTTCCCACATAAAAGAGGCACAGAAATTCCAGGAATTCCTTCAGCTTCTGAATaGCCAGCTGGTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ETRACPFPHKRGTEIPGIPSASE*PAGPSA
Trigger: AGCAGAAGGACCAGCTGGCCATTCAGAAGCTGAAGG...AATTCCTGGAATTTCTGTGCCTCTTTTATGTGGGAAAGGGCAGGCTCTGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp GATACTGCCCCAGGACTTTCAGTATCTCTAGGGCCTAAGGATAAAGCAGCATTAGTCAAAGTAGCCAACTaGGTCTTCAGCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: DTAPGLSVSLGPKDKAALVKVAN*VFSWCS
Trigger: ACTGCACCAGCTGAAGACTCAGTTGGCTACTTTGAC...TAATGCTGCTTTATCCTTAGGCCCTAGAGATACTGAAAGTCCTGGGGCAGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp CCAGAGAATTGGGGTAGCAATGGACCAGACTCAGACTGTGATGAGAGGGAGAAAATTTCCTGCTGTAACTaGGCCTGGAAATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: PENWGSNGPDSDCDEREKISCCN*AWKWLL
Trigger: TAAGAGCCATTTCCAGGCTCAGTTACAGCAGGAAAT...TTTCTCCCTCTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp TTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTCTGGTATTCTTGCTTTTaGGGACAACCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: FSSHAHHQKILPQDFQYLWYSCF*GQPGLS
Trigger: TGAGAGCCCAGGTTGTCCTCAAAAGCAAGAATACCA...GAGATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCTGGTACTGGAGAAGCTaGTTCTTCTGGGTCTCTATA +
Preference number: 4 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPWYWRS*FFWVSI
Trigger: TATAGAGACCCAGAAGAAGCAGCTTCTCCAGTACCA...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCAGAAGCTGCTTCTTCTaGGTCTCTATAGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSPHMHTIRRYCPRTFSIRSCFF*VSIVSS
Trigger: GCTGGAGACTATAGAGACCCAGAAGAAGCAGCTTCT...GATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp GATACTGCCCCAGGACTTTCAGTATCTCTAGGGCCTAAGGATAAAGCAGCATTACACGGGTCAGCTGCTTaGTCTGCAGTTCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: DTAPGLSVSLGPKDKAALHGSAA*SAVQIL
Trigger: AAGGATTTGAACTGCAGACCAAGCAGCTGACCCGTG...TAATGCTGCTTTATCCTTAGGCCCTAGAGATACTGAAAGTCCTGGGGCAGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp ACATCTTATTTTAAAACAGCCTTACCACTGTTCCAACTTCTGCACTTCTCAGTCCAGAAGGCCACCAGCTaGCACTGGTTGGGAGTCGCA +
Preference number: 4 (lower is better)
Translates to: TSYFKTALPLFQLLHFSVQKATS*HWLGVA
Trigger: TGCGACTCCCAACCAGTGCCAGCTGGTGGCCTTCTG...GACTGAGAAGTGCAGAAGTTGGAACAGTGGTAAGGCTGTTTTAAAATAAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp ACATCTTATTTTAAAACAGCCTTACCACTGTTCCAACTTCTGCACTTCTCAGTCCAGAGTCAGGAAAGGTaGGGCCTGGAAGCTGGACAC +
Preference number: 4 (lower is better)
Translates to: TSYFKTALPLFQLLHFSVQSQER*GLEAGH
Trigger: GTGTCCAGCTTCCAGGCCTCACCTTTCCTGACTCTG...GACTGAGAAGTGCAGAAGTTGGAACAGTGGTAAGGCTGTTTTAAAATAAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp TCAAGTCACTCAGGTTTAATGATTCCATCATTTGGACACATAAACTTCTGTTCCGTGCTATCCTCGCTGTaGGTGGAGCACCGGTCATCC +
Preference number: 4 (lower is better)
Translates to: SSHSGLMIPSFGHINFCSVLSSL*VEHRSS
Trigger: GGATGACCGGTGCTCCACTCACAGCGAGGATAGCAC...GGAACAGAAGTTTATGTGTCCAAATGATGGAATCATTAAACCTGAGTGACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp ACACATAAACTTCTGTTCCATTTAAGTCTGCTCACTGTAGATAATCCAGGTCACTCTTGGGCCCGATCATaGTGCTGCGTGATAAGCCGG +
Preference number: 4 (lower is better)
Translates to: THKLLFHLSLLTVDNPGHSWARS*CCVISR
Trigger: CCGGCTTATCACGCAGCAGCATGATCGGGCCCAAGA...GTGACCTGGATTATCTACAGTGAGCAGACTTAAATGGAACAGAAGTTTATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GAAACCAGAGCCTGCCCTTTCCCACATAAAAGAGGCACAGAAATTCCAGGAATTCTGTTGGTAATAGAGTaGAGTAGCCTTCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: ETRACPFPHKRGTEIPGILLVIE*SSLLPI
Trigger: GATGGGGAGAAGGCTACTGCACTCTATTACCAACAG...AATTCCTGGAATTTCTGTGCCTCTTTTATGTGGGAAAGGGCAGGCTCTGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp TTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTCACCATCAGAAGATACTaGCCCAGGACTTTCAGTATC +
Preference number: 4 (lower is better)
Translates to: FSSHAHHQKILPQDFQYLTIRRY*PRTFSI
Trigger: GATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGT...GAGATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp CTTCTGCACTTCTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAGGATTAATCTACTTATaGCAAGACCCACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLHFSVLTSSSPHMHTIRGLIYL*QDPLGR
Trigger: TCTGCCCAGTGGGTCTTGGCATAAGTAGATTAATCC...TCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAGAAGTGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp GATACTGCCCCAGGACTTTCAGTATCTCTAGGGCCTAAGGATAAAGCAGCATTACTTTTGAGGACAACCTaGGCTCTCATCTTGTACCTC +
Preference number: 4 (lower is better)
Translates to: DTAPGLSVSLGPKDKAALLLRTT*ALILYL
Trigger: GAGGTACAAGATGAGAGCCCAGGTTGTCCTCAAAAG...TAATGCTGCTTTATCCTTAGGCCCTAGAGATACTGAAAGTCCTGGGGCAGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp GTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGTTAGTGGCCAAACATTaGTCTTTAGAGTCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: VLTSSSPHMHTIRRYCPRLVAKH*SLESKD
Trigger: GTCTTTGGACTCTAAAGACCAATGTTTGGCCACTAA...CCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp GATACTGCCCCAGGACTTTCAGTATCTCTAGGGCCTAAGGATAAAGCAGCATTATATCTTTCAGGACATTaGCATCCAGACTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: DTAPGLSVSLGPKDKAALYLSGH*HPDWTP
Trigger: AGGAGTCCAGTCTGGATGTCAATGTCCTGAAAGATA...TAATGCTGCTTTATCCTTAGGCCCTAGAGATACTGAAAGTCCTGGGGCAGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp ACATCTTATTTTAAAACAGCCTTACCACTGTTCCAACTTCTGCACTTCTCAGTCCACATCCTTGAGCCGTaGCTGGTACTGGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TSYFKTALPLFQLLHFSVHILEP*LVLEKL
Trigger: CAGCTTCTCCAGTACCAGGCACGGCTCAAGGATGTG...GACTGAGAAGTGCAGAAGTTGGAACAGTGGTAAGGCTGTTTTAAAATAAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GGAAAAGATAGCAAAGTCGTTGACTCACAATCTCAGGCCAACCTCAGGCAGATATTGGTTTCTGCTATTTaGTCCTGCAGCCCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GKDSKVVDSQSQANLRQILVSAI*SCSPFN
Trigger: ATTGAAGGGGCTGCAGGAGCAAATAGCAGAAACCAA...TATCTGCCTGAGGTTGGCCTGAGATTGTGAGTCAACGACTTTGCTATCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp ACATCTTATTTTAAAACAGCCTTACCACTGTTCCAACTTCTGCACTTCTCAGTCAAGGCATGGTCACTCTaGTCTTGGGCCCGATCATGC +
Preference number: 4 (lower is better)
Translates to: TSYFKTALPLFQLLHFSVKAWSL*SWARSC
Trigger: GCATGATCGGGCCCAAGAGCAGAGTGACCATGCCTT...GACTGAGAAGTGCAGAAGTTGGAACAGTGGTAAGGCTGTTTTAAAATAAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp ACACATAAACTTCTGTTCCATTTAAGTCTGCTCACTGTAGATAATCCAGGTCACCTGGACTCCTCTCCATaGCTGTCTAAAGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: THKLLFHLSLLTVDNPGHLDSSP*LSKGDL
Trigger: CAGGTCCCCTTTAGACAGCCATGGAGAGGAGTCCAG...GTGACCTGGATTATCTACAGTGAGCAGACTTAAATGGAACAGAAGTTTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp ACATCTTATTTTAAAACAGCCTTACCACTGTTCCAACTTCTGCACTTCTCAGTCGCTCCCTCCCTGCTCTaGTCCCTGATGTTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: TSYFKTALPLFQLLHFSVAPSLL*SLMFFS
Trigger: CGAAAAGAACATCAGGGACCAGAGCAGGGAGGGAGC...GACTGAGAAGTGCAGAAGTTGGAACAGTGGTAAGGCTGTTTTAAAATAAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGCACCCCAACCCAGGTTTACACTTGTTTCTCCTCTaGACTGAAGTGCAAGATAGT +
Preference number: 4 (lower is better)
Translates to: LIYLCQDPLGRKHPNPGLHLFLL*TEVQDS
Trigger: ACTATCTTGCACTTCAGTCCAGAGGAGAAACAAGTG...TAAACCTGGGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATAAGTAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGCACCCCAACCCAGGTTTAAGCATTAATGGCATTTaGCAGAAAATCCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LIYLCQDPLGRKHPNPGLSINGI*QKIPSH
Trigger: GTGGGAAGGGATTTTCTGCCAAATGCCATTAATGCT...TAAACCTGGGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATAAGTAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCAGCTTCCTCAGTGATGTaGTCTCCACCTCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPASSVM*SPPPCG
Trigger: CCCGCAAGGAGGTGGAGATCACATCACTGAGGAAGC...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp GAAACCAGAGCCTGCCCTTTCCCACATAAAAGAGGCACAGAAATTCCAGGAATTCCTTTCCAGACTGCCTaGATAAGTTGCCTTTTCTTA +
Preference number: 4 (lower is better)
Translates to: ETRACPFPHKRGTEIPGIPFQTA*ISCLFL
Trigger: TAAGAAAAGGCAACTTATTCAGGCAGTCTGGAAAGG...AATTCCTGGAATTTCTGTGCCTCTTTTATGTGGGAAAGGGCAGGCTCTGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp TCAAGTCACTCAGGTTTAATGATTCCATCATTTGGACACATAAACTTCTGTTCCTGCATATGCTCGTCCTaGCAAGGCTTCTCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSHSGLMIPSFGHINFCSCICSS*QGFSGL
Trigger: GAGACCCGAGAAGCCTTGGCAGGACGAGCATATGCA...GGAACAGAAGTTTATGTGTCCAAATGATGGAATCATTAAACCTGAGTGACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp GGAAAAGATAGCAAAGTCGTTGACTCACAATCTCAGGCCAACCTCAGGCAGATACATCTTCTCCTCACATaGACACCATCAGAAGATACT +
Preference number: 4 (lower is better)
Translates to: GKDSKVVDSQSQANLRQIHLLLT*TPSEDT
Trigger: AGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATG...TATCTGCCTGAGGTTGGCCTGAGATTGTGAGTCAACGACTTTGCTATCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCATGGTCACTCTGCTCTTaGGCCCGATCATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPWSLCS*ARSCCC
Trigger: GCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCA...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCACTAAAGGGGACCTGCTaGAGGCTGCTAGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPLKGTC*RLLEPV
Trigger: CACTGGCTCTAGCAGCCTCCAGCAGGTCCCCTTTAG...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp ACACATAAACTTCTGTTCCATTTAAGTCTGCTCACTGTAGATAATCCAGGTCACTCCCTAAGATCAAGCTaGTGCTCAGGGCCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: THKLLFHLSLLTVDNPGHSLRSS*CSGPSL
Trigger: TAGAGAGGGCCCTGAGCACCAGCTTGATCTTAGGGA...GTGACCTGGATTATCTACAGTGAGCAGACTTAAATGGAACAGAAGTTTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp TCAAGTCACTCAGGTTTAATGATTCCATCATTTGGACACATAAACTTCTGTTCCATACCGACAGCACCTTaGTGCTGGCCTCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: SSHSGLMIPSFGHINFCSIPTAP*CWPLMP
Trigger: AGGCATTAGAGGCCAGCATCAAGGTGCTGTCGGTAT...GGAACAGAAGTTTATGTGTCCAAATGATGGAATCATTAAACCTGAGTGACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp ACACATAAACTTCTGTTCCATTTAAGTCTGCTCACTGTAGATAATCCAGGTCACATGCGGGACTTCTCCTaGGTGACTGTAGCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: THKLLFHLSLLTVDNPGHMRDFS*VTVAKE
Trigger: TTCTTTGGCTACAGTCACTCAGGAGAAGTCCCGCAT...GTGACCTGGATTATCTACAGTGAGCAGACTTAAATGGAACAGAAGTTTATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCACCCTGCTCTGGTCCCTaGTGTTCTTTTCGATGTGGC +
Preference number: 4 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPPCSGP*CSFRCG
Trigger: GCCACATCGAAAAGAACATCAGGGACCAGAGCAGGG...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp TTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGCACCCCAACCCAGGTTTAAATTCCAGGAATTCATaGAAATGGCATCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: LIYLCQDPLGRKHPNPGLNSRNS*KWHHLL
Trigger: CAAGAGATGATGCCATTTTCATGAATTCCTGGAATT...TAAACCTGGGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATAAGTAGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp GAAACCAGAGCCTGCCCTTTCCCACATAAAAGAGGCACAGAAATTCCAGGAATTATTTCAGAGATTAACTaGACTCCCTTTGGAGTCACA +
Preference number: 4 (lower is better)
Translates to: ETRACPFPHKRGTEIPGIISEIN*TPFGVT
Trigger: TGTGACTCCAAAGGGAGTTCAGTTAATCTCTGAAAT...AATTCCTGGAATTTCTGTGCCTCTTTTATGTGGGAAAGGGCAGGCTCTGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp ACACATAAACTTCTGTTCCATTTAAGTCTGCTCACTGTAGATAATCCAGGTCACACCTCACGGGTCAGCTaGTTGGTCTGCAGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: THKLLFHLSLLTVDNPGHTSRVS*LVCSSN
Trigger: ATTTGAACTGCAGACCAAGCAGCTGACCCGTGAGGT...GTGACCTGGATTATCTACAGTGAGCAGACTTAAATGGAACAGAAGTTTATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCTTACTCCTAGCTTTGTaGCAGGAGCATATTATTAAA +
Preference number: 4 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPLLLAL*QEHIIK
Trigger: TTTAATAATATGCTCCTGGCACAAAGCTAGGAGTAA...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp CCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCACTGGGCAGAACCCCCTTTCCAGACTaGCTGAATAAGTTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: PFLKRAGLIYLCQDPLGRTPFPD*LNKLPF
Trigger: AAAAGGCAACTTATTCAGGCAGTCTGGAAAGGGGGT...TCTGCCCAGTGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp TTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTCTTAATCAAAGTTTTCTaGACCCCAAACCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: FSSHAHHQKILPQDFQYLLIKVF*TPNPHK
Trigger: TTTGTGAGGGTTTGGGGTGCAGAAAACTTTGATTAA...GAGATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCACACTCTCGGACCAACTaGCCTCTTCGGACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPHSRTN*PLRTLE
Trigger: CTCCAAAGTCCGAAGAGGCCAGTTGGTCCGAGAGTG...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TATGATGAAATCACAGAAAGATACATATTAGTCCAGTTAGTGGCCAAACATTGGTCCTGCAGCAGCTTCTaGAGCTCACGCAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: YDEITERYILVQLVAKHWSCSSF*SSRSIK
Trigger: CTTGATGCTGCGTGAGCTCCAGAAGCTGCTGCAGGA...CCAATGTTTGGCCACTAACTGGACTAATATGTATCTTTCTGTGATTTCATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp ACACATAAACTTCTGTTCCATTTAAGTCTGCTCACTGTAGATAATCCAGGTCACATGTTCTTTTCGATGTaGCTCTGCAGGGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: THKLLFHLSLLTVDNPGHMFFSM*LCRAAT
Trigger: GGTTGCAGCCCTGCAGAGCCACATCGAAAAGAACAT...GTGACCTGGATTATCTACAGTGAGCAGACTTAAATGGAACAGAAGTTTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp ACATCTTATTTTAAAACAGCCTTACCACTGTTCCAACTTCTGCACTTCTCAGTCGGTCCCTTTCCAGCCTaGTTTTATGTCCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: TSYFKTALPLFQLLHFSVGPFPA*FYVPRE
Trigger: TTCTCTGGGGACATAAAACCAGGCTGGAAAGGGACC...GACTGAGAAGTGCAGAAGTTGGAACAGTGGTAAGGCTGTTTTAAAATAAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp ACATCTTATTTTAAAACAGCCTTACCACTGTTCCAACTTCTGCACTTCTCAGTCACGGAGTTGATCCTCTaGAAGAGCTGTCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TSYFKTALPLFQLLHFSVTELIL*KSCLSH
Trigger: ATGAGAAAGACAGCTCTTGCAGAGGATCAACTCCGT...GACTGAGAAGTGCAGAAGTTGGAACAGTGGTAAGGCTGTTTTAAAATAAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp TATGATGAAATCACAGAAAGATACATATTAGTCCAGTTAGTGGCCAAACATTGGTCCTTGCGGGCCAGTTaGTCAGCGTACAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: YDEITERYILVQLVAKHWSLRAS*SAYRKK
Trigger: TTTCTTTCTGTACGCTGAGCAACTGGCCCGCAAGGA...CCAATGTTTGGCCACTAACTGGACTAATATGTATCTTTCTGTGATTTCATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp ACATCTTATTTTAAAACAGCCTTACCACTGTTCCAACTTCTGCACTTCTCAGTCGCAAGTTGTAATGCTTaGGTCAGGCTATCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: TSYFKTALPLFQLLHFSVASCNA*VRLSED
Trigger: ATCCTCTGATAGCCTGACCCAAGCATTACAACTTGC...GACTGAGAAGTGCAGAAGTTGGAACAGTGGTAAGGCTGTTTTAAAATAAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp TATGATGAAATCACAGAAAGATACATATTAGTCCAGTTAGTGGCCAAACATTGGCGTACAGAAAGAAAGTaGGCTCATTGGCCGCTGCAA +
Preference number: 4 (lower is better)
Translates to: YDEITERYILVQLVAKHWRTERK*AHWPLQ
Trigger: TTGCAGCGGCCAATGAGCCCACTTTCTTTCTGTACG...CCAATGTTTGGCCACTAACTGGACTAATATGTATCTTTCTGTGATTTCATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCAATGTCCCCAGAGAATTaGGGTAGCAATGGACCAGAC +
Preference number: 4 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPMSPEN*GSNGPD
Trigger: GTCTGGTCCATTGCTACCCCAATTCTCTGGGGACAT...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp ACACATAAACTTCTGTTCCATTTAAGTCTGCTCACTGTAGATAATCCAGGTCACCTATTTCAAACTTCCTaGTCCCTTTCCAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: THKLLFHLSLLTVDNPGHLFQTS*SLSSLV
Trigger: AACCAGGCTGGAAAGGGACCAGGAAGTTTGAAATAG...GTGACCTGGATTATCTACAGTGAGCAGACTTAAATGGAACAGAAGTTTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR GCA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCATCATCTCGAATGGCCTaGAGTTCACTTTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPSSRMA*SSLFSS
Trigger: GGAGCTGAAAAGTGAACTGCAGGCCATTCGAGATGA...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCAAGAAAGTGGGCTCATTaGCCGCTGCAAGTTGTAATG +
Preference number: 4 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPRKWAH*PLQVVM
Trigger: CATTACAACTTGCAGCGGCCAATGAGCCCACTTTCT...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR TCA 90 bp TATGATGAAATCACAGAAAGATACATATTAGTCCAGTTAGTGGCCAAACATTGGTTTACCACTTCCCTGTaGGAGCTACAGCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: YDEITERYILVQLVAKHWFTTSL*ELQQSF
Trigger: AAAAGATTGCTGTAGCTCTCACAGGGAAGTGGTAAA...CCAATGTTTGGCCACTAACTGGACTAATATGTATCTTTCTGTGATTTCATCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCATCTTCTCATCTCGAATaGCCTGCAGTTCACTTTTCA +
Preference number: 4 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPSSHLE*PAVHFS
Trigger: TGAAAAGTGAACTGCAGGCCATTCGAGATGAGAAGA...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CCA 90 bp ACACATAAACTTCTGTTCCATTTAAGTCTGCTCACTGTAGATAATCCAGGTCACAAAAGCAGGTTACTTTaGAAATCCCTAAGATCAAGC +
Preference number: 4 (lower is better)
Translates to: THKLLFHLSLLTVDNPGHKSRLL*KSLRSS
Trigger: GCTTGATCTTAGGGATTTCCAAAGTAACCTGCTTTT...GTGACCTGGATTATCTACAGTGAGCAGACTTAAATGGAACAGAAGTTTATGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp GGACGGACTGGCGAAAGCGGCCGCCCGGTCCCAGGCCCGGAGGGCTaGGGCGGATTCTACCCCGGAGGCGGGGCGACACTGGCACCAGAG +
Preference number: 5 (lower is better)
Translates to: GRTGESGRPVPGPEG*GGFYPGGGATLAPE
Trigger: CTCTGGTGCCAGTGTCGCCCCGCCTCCGGGGTAGAATCCGCCCCAGCCCTCCGGGCCTGGGACCGGGCGGCCGCTTTCGCCAGTCCGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp CTCCACCTAGTTATCCCGGACCTAATGCGGAACGGCCGGACGGACTaGCGAAAGCGGCCGCCCGGTCCCAGGCCCGGAGGGCTGGGGCGG +
Preference number: 5 (lower is better)
Translates to: LHLVIPDLMRNGRTD*RKRPPGPRPGGLGR
Trigger: CCGCCCCAGCCCTCCGGGCCTGGGACCGGGCGGCCGCTTTCGCCAGTCCGTCCGGCCGTTCCGCATTAGGTCCGGGATAACTAGGTGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp ATTCTACCCCGGAGGCGGGGCGACACTGGCACCAGAGGTGCGCACTaGCAGGGCTCGTTAGCGCTGGCCCAGAAGCCGCTCCGCACTCTC +
Preference number: 5 (lower is better)
Translates to: ILPRRRGDTGTRGAH*QGSLALAQKPLRTL
Trigger: GAGAGTGCGGAGCGGCTTCTGGGCCAGCGCTAACGAGCCCTGGCAGTGCGCACCTCTGGTGCCAGTGTCGCCCCGCCTCCGGGGTAGAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 90 bp AGCCCGGGCCGGCCCCCTCGGCCCACGTCGGCCAGAGGGTTACGCTaGGCTCGGTCCCATCACGACATCCTAACTAAAGCTGCCTGCCGA +
Preference number: 5 (lower is better)
Translates to: SPGRPPRPTSARGLR*ARSHHDILTKAACR
Trigger: TCGGCAGGCAGCTTTAGTTAGGATGTCGTGATGGGACCGAGCTCAGCGTAACCCTCTGGCCGACGTGGGCCGAGGGGGCCGGCCCGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 90 bp CCTCGCTGTGAGTGGAGCACCGGTCATCCACAGAGTCAGGAAAGGTaGGGCCTGGAAGCTGGACACCTGCGAGGCCCACATCTGCCTCGT +
Preference number: 5 (lower is better)
Translates to: PRCEWSTGHPQSQER*GLEAGHLRGPHLPR
Trigger: ACGAGGCAGATGTGGGCCTCGCAGGTGTCCAGCTTCCAGGCCTCACCTTTCCTGACTCTGTGGATGACCGGTGCTCCACTCACAGCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp GCTCCCTCCCTGCTCTGGTCCCTGATGTTCTTTTCGATGTGGCTCTaGAGGGCTGCAACCTCCTCACGATGCCGTTCGCCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: APSLLWSLMFFSMWL*RAATSSRCRSPSSS
Trigger: GCTGGAGGAGGGCGAACGGCATCGTGAGGAGGTTGCAGCCCTGCAGAGCCACATCGAAAAGAACATCAGGGACCAGAGCAGGGAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp GAGCACCGGTCATCCACAGAGTCAGGAAAGGTGAGGCCTGGAAGCTaGACACCTGCGAGGCCCACATCTGCCTCGTGGGATACCGACAGC +
Preference number: 5 (lower is better)
Translates to: EHRSSTESGKVRPGS*TPARPTSASWDTDS
Trigger: GCTGTCGGTATCCCACGAGGCAGATGTGGGCCTCGCAGGTGTCCAGCTTCCAGGCCTCACCTTTCCTGACTCTGTGGATGACCGGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp CCTGCTCTGGTCCCTGATGTTCTTTTCGATGTGGCTCTGCAGGGCTaGAACCTCCTCACGATGCCGTTCGCCCTCCTCCAGCAGCCGATC +
Preference number: 5 (lower is better)
Translates to: PALVPDVLFDVALQG*NLLTMPFALLQQPI
Trigger: GATCGGCTGCTGGAGGAGGGCGAACGGCATCGTGAGGAGGTTGCAGCCCTGCAGAGCCACATCGAAAAGAACATCAGGGACCAGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 90 bp GCCGCAGTATCCAAGCTAGTGGCGGTCCCAGTGCTATCCTCGCTGTaGGTGGAGCACCGGTCATCCACAGAGTCAGGAAAGGTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: AAVSKLVAVPVLSSL*VEHRSSTESGKVRP
Trigger: AGGCCTCACCTTTCCTGACTCTGTGGATGACCGGTGCTCCACTCACAGCGAGGATAGCACTGGGACCGCCACTAGCTTGGATACTGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 90 bp CCAAGGCCACAGAACGCAGTTGCTCCAGTTCCAAGTCCTTCTCGGTaGGCACAGCTAGGGCACGATCCCGCTGCTTGTGCAGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PRPQNAVAPVPSPSR*AQLGHDPAACAAPP
Trigger: AGGAGGAGCTGCACAAGCAGCGGGATCGTGCCCTAGCTGTGCTCACCGAGAAGGACTTGGAACTGGAGCAACTGCGTTCTGTGGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp AAGTCCTTCTCGGTGAGCACAGCTAGGGCACGATCCCGCTGCTTGTaGAGCTCCTCCTCCAGTTTCAGTGTGCGGTCCCTGAAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: KSFSVSTARARSRCL*SSSSSFSVRSLKSS
Trigger: GCTGGACTTCAGGGACCGCACACTGAAACTGGAGGAGGAGCTGCACAAGCAGCGGGATCGTGCCCTAGCTGTGCTCACCGAGAAGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp GTGAGGCCTGGAAGCTGGACACCTGCGAGGCCCACATCTGCCTCGTaGGATACCGACAGCACCTTGATGCTGGCCTCTAATGCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: VRPGSWTPARPTSAS*DTDSTLMLASNASF
Trigger: GAAAGAGGCATTAGAGGCCAGCATCAAGGTGCTGTCGGTATCCCACGAGGCAGATGTGGGCCTCGCAGGTGTCCAGCTTCCAGGCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp GCTAACGCCACTCTCGGACCAACTGGCCTCTTCGGACTTTGGAGGTaGTGGTCCACGGGCCGGTCTGTCATCTTCTACCCCAAACTCACC +
Preference number: 5 (lower is better)
Translates to: ANATLGPTGLFGLWR*WSTGRSVIFYPKLT
Trigger: GGTGAGTTTGGGGTAGAAGATGACAGACCGGCCCGTGGACCACCACCTCCAAAGTCCGAAGAGGCCAGTTGGTCCGAGAGTGGCGTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 90 bp CAGCTGATGCACCTCGACCTCCAGCCTGTGCTTCTGCTTCCTCAGTaGTGTGATCTCCACCTCCTTGCGGGCCAGTTGCTCAGCGTACAG +
Preference number: 5 (lower is better)
Translates to: QLMHLDLQPVLLLPQ*CDLHLLAGQLLSVQ
Trigger: CTGTACGCTGAGCAACTGGCCCGCAAGGAGGTGGAGATCACATCACTGAGGAAGCAGAAGCACAGGCTGGAGGTCGAGGTGCATCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp TGCAGCAGCTTCTGGAGCTCACGCAGCATCAAGGCATGGTCACTCTaGTCTTGGGCCCGATCATGCTGCTGCGTGATAAGCCGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: CSSFWSSRSIKAWSL*SWARSCCCVISRAL
Trigger: CAAAGCCCGGCTTATCACGCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCATGCCTTGATGCTGCGTGAGCTCCAGAAGCTGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp AGTTCCAAGTCCTTCTCGGTGAGCACAGCTAGGGCACGATCCCGCTaGTTGTGCAGCTCCTCCTCCAGTTTCAGTGTGCGGTCCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SSKSFSVSTARARSR*LCSSSSSFSVRSLK
Trigger: CTTCAGGGACCGCACACTGAAACTGGAGGAGGAGCTGCACAAGCAGCGGGATCGTGCCCTAGCTGTGCTCACCGAGAAGGACTTGGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp AACGCCACTCTCGGACCAACTGGCCTCTTCGGACTTTGGAGGTGGTaGTCCACGGGCCGGTCTGTCATCTTCTACCCCAAACTCACCCTT +
Preference number: 5 (lower is better)
Translates to: NATLGPTGLFGLWRW*STGRSVIFYPKLTL
Trigger: AAGGGTGAGTTTGGGGTAGAAGATGACAGACCGGCCCGTGGACCACCACCTCCAAAGTCCGAAGAGGCCAGTTGGTCCGAGAGTGGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp GCTACTGCTAACGCCACTCTCGGACCAACTGGCCTCTTCGGACTTTaGAGGTGGTGGTCCACGGGCCGGTCTGTCATCTTCTACCCCAAA +
Preference number: 5 (lower is better)
Translates to: ATANATLGPTGLFGL*RWWSTGRSVIFYPK
Trigger: TTTGGGGTAGAAGATGACAGACCGGCCCGTGGACCACCACCTCCAAAGTCCGAAGAGGCCAGTTGGTCCGAGAGTGGCGTTAGCAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp CTCTCCTCCTGCAGCAGCTTCTGGAGCTCACGCAGCATCAAGGCATaGTCACTCTGCTCTTGGGCCCGATCATGCTGCTGCGTGATAAGC +
Preference number: 5 (lower is better)
Translates to: LSSCSSFWSSRSIKA*SLCSWARSCCCVIS
Trigger: GCTTATCACGCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCATGCCTTGATGCTGCGTGAGCTCCAGAAGCTGCTGCAGGAGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp CTCCTCGCAGGAGAGCCGCAGGGAAATATACTTCTCCTTCAGCTCTaGAAGCTGTTCCTGGGCTGCCTCCAGCTCCTTTCCCAGGTTACC +
Preference number: 5 (lower is better)
Translates to: LLAGEPQGNILLLQL*KLFLGCLQLLSQVT
Trigger: GGTAACCTGGGAAAGGAGCTGGAGGCAGCCCAGGAACAGCTTGCAGAGCTGAAGGAGAAGTATATTTCCCTGCGGCTCTCCTGCGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp ACCACATCCTTGAGCCGTGCCTGGTACTGGAGAAGCTGCTTCTTCTaGGTCTCTATAGTCTCCAGCAAGTCCTTCTTGCTCGGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: TTSLSRAWYWRSCFF*VSIVSSKSFLLGPP
Trigger: GGGCGGCCCGAGCAAGAAGGACTTGCTGGAGACTATAGAGACCCAGAAGAAGCAGCTTCTCCAGTACCAGGCACGGCTCAAGGATGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp CATCCAGACTGGACTCCTCTCCATGGCTGTCTAAAGGGGACCTGCTaGAGGCTGCTAGAGCCAGTGTCTTGTTCTCCAGGTCCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: HPDWTPLHGCLKGTC*RLLEPVSCSPGPAA
Trigger: TGCAGCTGGACCTGGAGAACAAGACACTGGCTCTAGCAGCCTCCAGCAGGTCCCCTTTAGACAGCCATGGAGAGGAGTCCAGTCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS TCA 90 bp GATGCACCTCGACCTCCAGCCTGTGCTTCTGCTTCCTCAGTGATGTaGTCTCCACCTCCTTGCGGGCCAGTTGCTCAGCGTACAGAAAGA +
Preference number: 5 (lower is better)
Translates to: DAPRPPACASASSVM*SPPPCGPVAQRTER
Trigger: TCTTTCTGTACGCTGAGCAACTGGCCCGCAAGGAGGTGGAGATCACATCACTGAGGAAGCAGAAGCACAGGCTGGAGGTCGAGGTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp CGCAGCATCAAGGCATGGTCACTCTGCTCTTGGGCCCGATCATGCTaGTGCGTGATAAGCCGGGCTTTGGTTTCTGCTATTTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RSIKAWSLCSWARSC*CVISRALVSAICSC
Trigger: GCAGGAGCAAATAGCAGAAACCAAAGCCCGGCTTATCACGCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCATGCCTTGATGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp AGCTTCTGGAGCTCACGCAGCATCAAGGCATGGTCACTCTGCTCTTaGGCCCGATCATGCTGCTGCGTGATAAGCCGGGCTTTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SFWSSRSIKAWSLCS*ARSCCCVISRALVS
Trigger: AGAAACCAAAGCCCGGCTTATCACGCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCATGCCTTGATGCTGCGTGAGCTCCAGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 90 bp CACCTGCGAGGCCCACATCTGCCTCGTGGGATACCGACAGCACCTTaGTGCTGGCCTCTAATGCCTCTTTCTCCTTCAGCAGGCTTTTAT +
Preference number: 5 (lower is better)
Translates to: HLRGPHLPRGIPTAP*CWPLMPLSPSAGFY
Trigger: ATAAAAGCCTGCTGAAGGAGAAAGAGGCATTAGAGGCCAGCATCAAGGTGCTGTCGGTATCCCACGAGGCAGATGTGGGCCTCGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp AGCATCAAGGCATGGTCACTCTGCTCTTGGGCCCGATCATGCTGCTaGGTGATAAGCCGGGCTTTGGTTTCTGCTATTTGCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SIKAWSLCSWARSCC*VISRALVSAICSCS
Trigger: GCTGCAGGAGCAAATAGCAGAAACCAAAGCCCGGCTTATCACGCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCATGCCTTGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp TCACGCAGCATCAAGGCATGGTCACTCTGCTCTTGGGCCCGATCATaGTGCTGCGTGATAAGCCGGGCTTTGGTTTCTGCTATTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SRSIKAWSLCSWARS*CCVISRALVSAICS
Trigger: GGAGCAAATAGCAGAAACCAAAGCCCGGCTTATCACGCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCATGCCTTGATGCTGCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp TGTTCTCCAGGTCCAGCTGCAGAATGCGCTCCTTCAGCTTCTGAATaGCCAGCTGGTCCTTCTGCTTGGCTTTCTCGTAGGTGCCTAGCA +
Preference number: 5 (lower is better)
Translates to: CSPGPAAECAPSASE*PAGPSAWLSRRCLA
Trigger: TGCTAGGCACCTACGAGAAAGCCAAGCAGAAGGACCAGCTGGCCATTCAGAAGCTGAAGGAGCGCATTCTGCAGCTGGACCTGGAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS-3UTR CAA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCGTGATCTCCACCTCCTaGCGGGCCAGTTGCTCAGCG +
Preference number: 5 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPVISTS*RASCSA
Trigger: CGCTGAGCAACTGGCCCGCAAGGAGGTGGAGATCAC...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp GCTTCTGAATGGCCAGCTGGTCCTTCTGCTTGGCTTTCTCGTAGGTaGCTAGCAGCTCAGACACCTCGGATATTTGATTCTCCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: ASEWPAGPSAWLSRR*LAAQTPRIFDSPGL
Trigger: CAGCCCTGGAGAATCAAATATCCGAGGTGTCTGAGCTGCTAGGCACCTACGAGAAAGCCAAGCAGAAGGACCAGCTGGCCATTCAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS GCA 90 bp TTCTGCTTCCTCAGTGATGTGATCTCCACCTCCTTGCGGGCCAGTTaGTCAGCGTACAGAAAGAAAGTGGGCTCATTGGCCGCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: FCFLSDVISTSLRAS*SAYRKKVGSLAAAS
Trigger: ACTTGCAGCGGCCAATGAGCCCACTTTCTTTCTGTACGCTGAGCAACTGGCCCGCAAGGAGGTGGAGATCACATCACTGAGGAAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp CCTTGCGGGCCAGTTGCTCAGCGTACAGAAAGAAAGTGGGCTCATTaGCCGCTGCAAGTTGTAATGCTTGGGTCAGGCTATCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: PCGPVAQRTERKWAH*PLQVVMLGSGYQRM
Trigger: CATCCTCTGATAGCCTGACCCAAGCATTACAACTTGCAGCGGCCAATGAGCCCACTTTCTTTCTGTACGCTGAGCAACTGGCCCGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp TCTCCACCTCCTTGCGGGCCAGTTGCTCAGCGTACAGAAAGAAAGTaGGCTCATTGGCCGCTGCAAGTTGTAATGCTTGGGTCAGGCTAT +
Preference number: 5 (lower is better)
Translates to: SPPPCGPVAQRTERK*AHWPLQVVMLGSGY
Trigger: ATAGCCTGACCCAAGCATTACAACTTGCAGCGGCCAATGAGCCCACTTTCTTTCTGTACGCTGAGCAACTGGCCCGCAAGGAGGTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCACCCCAAACTCACCCTaGGTGCTGGTGAGACTGGCC +
Preference number: 5 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPTPNSP*VLVRLA
Trigger: GGCCAGTCTCACCAGCACCAAGGGTGAGTTTGGGGT...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp TTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGCACCCCAACCCAGGTTTATGGCCTCTTCGGACTTaGGAGGTGGTGGTCCACGGG +
Preference number: 5 (lower is better)
Translates to: LIYLCQDPLGRKHPNPGLWPLRT*EVVVHG
Trigger: CCCGTGGACCACCACCTCCAAAGTCCGAAGAGGCCA...TAAACCTGGGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATAAGTAGATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp CTTCTGCACTTCTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAGCACGATCCCGCTGCTaGTGCAGCTCCTCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: LLHFSVLTSSSPHMHTIRARSRC*CSSSSS
Trigger: ACTGGAGGAGGAGCTGCACAAGCAGCGGGATCGTGC...TCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAGAAGTGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 90 bp CCTCTTTCTCCTTCAGCAGGCTTTTATAGGCACGGACCACATCCTTaGGCCGTGCCTGGTACTGGAGAAGCTGCTTCTTCTGGGTCTCTA +
Preference number: 5 (lower is better)
Translates to: PLSPSAGFYRHGPHP*AVPGTGEAASSGSL
Trigger: TAGAGACCCAGAAGAAGCAGCTTCTCCAGTACCAGGCACGGCTCAAGGATGTGGTCCGTGCCTATAAAAGCCTGCTGAAGGAGAAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp CTCCTTCAGCAGGCTTTTATAGGCACGGACCACATCCTTGAGCCGTaGCTGGTACTGGAGAAGCTGCTTCTTCTGGGTCTCTATAGTCTC +
Preference number: 5 (lower is better)
Translates to: LLQQAFIGTDHILEP*LVLEKLLLLGLYSL
Trigger: GAGACTATAGAGACCCAGAAGAAGCAGCTTCTCCAGTACCAGGCACGGCTCAAGGATGTGGTCCGTGCCTATAAAAGCCTGCTGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp AGCTTCTCCACATCCAGGGTCACCTGGCTTTTCCTGGCCGCAACCTaGAGCAGCCTCTTCAGCTTCTCCATCTTATCTTTCAGGACATTG +
Preference number: 5 (lower is better)
Translates to: SFSTSRVTWLFLAAT*SSLFSFSILSFRTL
Trigger: CAATGTCCTGAAAGATAAGATGGAGAAGCTGAAGAGGCTGCTGCAGGTTGCGGCCAGGAAAAGCCAGGTGACCCTGGATGTGGAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CCA 90 bp CTTAAGGCGGGCAGCCTCTTCCTGAAGTTCTTGCAGCCGGGGATCTaGCTGATTCTTCTCATCTCGAATGGCCTGCAGTTCACTTTTCAG +
Preference number: 5 (lower is better)
Translates to: LKAGSLFLKFLQPGI*LILLISNGLQFTFQ
Trigger: CTGAAAAGTGAACTGCAGGCCATTCGAGATGAGAAGAATCAGCCAGATCCCCGGCTGCAAGAACTTCAGGAAGAGGCTGCCCGCCTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp GAATGCGCTCCTTCAGCTTCTGAATGGCCAGCTGGTCCTTCTGCTTaGCTTTCTCGTAGGTGCCTAGCAGCTCAGACACCTCGGATATTT +
Preference number: 5 (lower is better)
Translates to: ECAPSASEWPAGPSA*LSRRCLAAQTPRIF
Trigger: AAATATCCGAGGTGTCTGAGCTGCTAGGCACCTACGAGAAAGCCAAGCAGAAGGACCAGCTGGCCATTCAGAAGCTGAAGGAGCGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS TCA 90 bp CCTGCAGCAGCCTCTTCAGCTTCTCCATCTTATCTTTCAGGACATTaGCATCCAGACTGGACTCCTCTCCATGGCTGTCTAAAGGGGACC +
Preference number: 5 (lower is better)
Translates to: PAAASSASPSYLSGH*HPDWTPLHGCLKGT
Trigger: GGTCCCCTTTAGACAGCCATGGAGAGGAGTCCAGTCTGGATGTCAATGTCCTGAAAGATAAGATGGAGAAGCTGAAGAGGCTGCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CCA 90 bp TACAGAAAGAAAGTGGGCTCATTGGCCGCTGCAAGTTGTAATGCTTaGGTCAGGCTATCAGAGGATGATGTGTCAGCTGGGTCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: YRKKVGSLAAASCNA*VRLSEDDVSAGSPG
Trigger: TCCTGGGGACCCAGCTGACACATCATCCTCTGATAGCCTGACCCAAGCATTACAACTTGCAGCGGCCAATGAGCCCACTTTCTTTCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp TTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTCGAGGGTCTGAACGGATaGCCCCACGTCAGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: FSSHAHHQKILPQDFQYLEGLNG*PHVSFP
Trigger: TGGAAAGCTGACGTGGGGCAATCCGTTCAGACCCTC...GAGATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCTCTCCTCCTCCGCCTaGTTACTGGCATCCTCTAAG +
Preference number: 5 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPLSSSA*LLASSK
Trigger: CTTAGAGGATGCCAGTAACAAGGCGGAGGAGGAGAG...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp TTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGCACCCCAACCCAGGTTTAATGGTCACTCTGCTCTaGGGCCCGATCATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LIYLCQDPLGRKHPNPGLMVTLL*GPIMLL
Trigger: CAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCAT...TAAACCTGGGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATAAGTAGATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp TTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGCACCCCAACCCAGGTTTACTCTTCCTGAAGTTCTaGCAGCCGGGGATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LIYLCQDPLGRKHPNPGLLFLKF*QPGIWL
Trigger: CAGCCAGATCCCCGGCTGCAAGAACTTCAGGAAGAG...TAAACCTGGGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATAAGTAGATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp GTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGAGACACCTCGGATATTaGATTCTCCAGGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: VLTSSSPHMHTIRRYCPRRHLGY*ILQGCH
Trigger: GTGGCAGCCCTGGAGAATCAAATATCCGAGGTGTCT...CCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp CTCAAACTCTTCCTTCAGCTGTTTCAGCTCCTGTTGGTAATAGAGTaGAGTAGCCTTCTCCCCATCAGCAGCCTCCGAGCTGGGCATTAT +
Preference number: 5 (lower is better)
Translates to: LKLFLQLFQLLLVIE*SSLLPISSLRAGHY
Trigger: ATAATGCCCAGCTCGGAGGCTGCTGATGGGGAGAAGGCTACTGCACTCTATTACCAACAGGAGCTGAAACAGCTGAAGGAAGAGTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CCA 90 bp CCAGCTGGCACTGGTTGGGAGTCGCATTATCACTTGTTTCTCCTCTaGACTGAAGTGCAAGATAGTCAGTATGGCTGTGAGAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: PAGTGWESHYHLFLL*TEVQDSQYGCESLL
Trigger: CAGCAGACTCTCACAGCCATACTGACTATCTTGCACTTCAGTCCAGAGGAGAAACAAGTGATAATGCGACTCCCAACCAGTGCCAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp GATACTGCCCCAGGACTTTCAGTATCTCTAGGGCCTAAGGATAAAGCAGCATTAAGCTGGTGCAGTCTTTaGTCCACCTCCCCACCTGCA +
Preference number: 5 (lower is better)
Translates to: DTAPGLSVSLGPKDKAALSWCSL*STSPPA
Trigger: TGCAGGTGGGGAGGTGGACAAAAGACTGCACCAGCT...TAATGCTGCTTTATCCTTAGGCCCTAGAGATACTGAAAGTCCTGGGGCAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp AGGCAGCAGAAACCAGAGCCTGCCCTTTCCCACATAAAAGAGGCACAGAAATTCTCACGGGTCAGCTGCTaGGTCTGCAGTTCAAATCCT +
Preference number: 5 (lower is better)
Translates to: RQQKPEPALSHIKEAQKFSRVSC*VCSSNP
Trigger: AGGATTTGAACTGCAGACCAAGCAGCTGACCCGTGA...GAATTTCTGTGCCTCTTTTATGTGGGAAAGGGCAGGCTCTGGTTTCTGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp TTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTCGGCCACAGAACGCAGTaGCTCCAGTTCCAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: FSSHAHHQKILPQDFQYLGHRTQ*LQFQVL
Trigger: AAGGACTTGGAACTGGAGCAACTGCGTTCTGTGGCC...GAGATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp CCAGAGAATTGGGGTAGCAATGGACCAGACTCAGACTGTGATGAGAGGGAGAAAACCAGCTGGCACTGGTaGGGAGTCGCATTATCACTT +
Preference number: 5 (lower is better)
Translates to: PENWGSNGPDSDCDEREKTSWHW*GVALSL
Trigger: AAGTGATAATGCGACTCCCAACCAGTGCCAGCTGGT...TTTCTCCCTCTCATCACAGTCTGAGTCTGGTCCATTGCTACCCCAATTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp CAGGGAAATATACTTCTCCTTCAGCTCTGCAAGCTGTTCCTGGGCTaGCTCCAGCTCCTTTCCCAGGTTACCATCTTTGGTATTCTTGCT +
Preference number: 5 (lower is better)
Translates to: QGNILLLQLCKLFLG*LQLLSQVTIFGILA
Trigger: AGCAAGAATACCAAAGATGGTAACCTGGGAAAGGAGCTGGAGGCAGCCCAGGAACAGCTTGCAGAGCTGAAGGAGAAGTATATTTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 90 bp AAAATGGCATCATCTCTTGCCAGAAGGCCACCAGCTGGCACTGGTTaGGAGTCGCATTATCACTTGTTTCTCCTCTGGACTGAAGTGCAA +
Preference number: 5 (lower is better)
Translates to: KMASSLARRPPAGTG*ESHYHLFLLWTEVQ
Trigger: TTGCACTTCAGTCCAGAGGAGAAACAAGTGATAATGCGACTCCCAACCAGTGCCAGCTGGTGGCCTTCTGGCAAGAGATGATGCCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp GAAACCAGAGCCTGCCCTTTCCCACATAAAAGAGGCACAGAAATTCCAGGAATTGATACCGACAGCACCTaGATGCTGGCCTCTAATGCC +
Preference number: 5 (lower is better)
Translates to: ETRACPFPHKRGTEIPGIDTDST*MLASNA
Trigger: GGCATTAGAGGCCAGCATCAAGGTGCTGTCGGTATC...AATTCCTGGAATTTCTGTGCCTCTTTTATGTGGGAAAGGGCAGGCTCTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp AGGCAGCAGAAACCAGAGCCTGCCCTTTCCCACATAAAAGAGGCACAGAAATTCAGATTGCTGACGGAGTaGATCCTCTGCAAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: RQQKPEPALSHIKEAQKFRLLTE*ILCKSC
Trigger: ACAGCTCTTGCAGAGGATCAACTCCGTCAGCAATCT...GAATTTCTGTGCCTCTTTTATGTGGGAAAGGGCAGGCTCTGGTTTCTGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp GTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGTTGGTATTCTTGCTTTaGAGGACAACCTGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: VLTSSSPHMHTIRRYCPRLVFLL*RTTWAL
Trigger: GAGAGCCCAGGTTGTCCTCAAAAGCAAGAATACCAA...CCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp GAAACCAGAGCCTGCCCTTTCCCACATAAAAGAGGCACAGAAATTCCAGGAATTCTCCTTGCGGGCCAGTaGCTCAGCGTACAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: ETRACPFPHKRGTEIPGILLAGQ*LSVQKE
Trigger: TTCTTTCTGTACGCTGAGCAACTGGCCCGCAAGGAG...AATTCCTGGAATTTCTGTGCCTCTTTTATGTGGGAAAGGGCAGGCTCTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp ACATCTTATTTTAAAACAGCCTTACCACTGTTCCAACTTCTGCACTTCTCAGTCTCCAGCAAGTCCTTCTaGCTCGGGCCGCCCCCGAAA +
Preference number: 5 (lower is better)
Translates to: TSYFKTALPLFQLLHFSVSSKSF*LGPPPK
Trigger: TTTCGGGGGCGGCCCGAGCAAGAAGGACTTGCTGGA...GACTGAGAAGTGCAGAAGTTGGAACAGTGGTAAGGCTGTTTTAAAATAAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp ACACATAAACTTCTGTTCCATTTAAGTCTGCTCACTGTAGATAATCCAGGTCACAGCCTCCTGCTGGTGTaGGTGCTCCAGCTCCTCGCA +
Preference number: 5 (lower is better)
Translates to: THKLLFHLSLLTVDNPGHSLLLV*VLQLLA
Trigger: TGCGAGGAGCTGGAGCACCAACACCAGCAGGAGGCT...GTGACCTGGATTATCTACAGTGAGCAGACTTAAATGGAACAGAAGTTTATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp CTTCTGCACTTCTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAAATCCCTTCCCACATaGAAGACTCCTCCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LLHFSVLTSSSPHMHTIRKSLPT*KTPPSS
Trigger: TGAGCTGGGAGGAGTCTTCAATGTGGGAAGGGATTT...TCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAGAAGTGCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 90 bp CCTCCAGCTCCTTTCCCAGGTTACCATCTTTGGTATTCTTGCTTTTaGGGACAACCTGGGCTCTCATCTTGTACCTCTCAAACTCTTCCT +
Preference number: 5 (lower is better)
Translates to: PPAPFPGYHLWYSCF*GQPGLSSCTSQTLP
Trigger: AGGAAGAGTTTGAGAGGTACAAGATGAGAGCCCAGGTTGTCCTCAAAAGCAAGAATACCAAAGATGGTAACCTGGGAAAGGAGCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp GGTCATAAGCGGTGTGATTGCATAGGTCATCCCCAGGCACTAATTAGACTAAGCCTGTTTCAGCTCCTGTaGGTAATAGAGTGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: GHKRCDCIGHPQALIRLSLFQLL*VIECSS
Trigger: GCTACTGCACTCTATTACCAACAGGAGCTGAAACAG...GCTTAGTCTAATTAGTGCCTGGGGATGACCTATGCAATCACACCGCTTATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp GATACTGCCCCAGGACTTTCAGTATCTCTAGGGCCTAAGGATAAAGCAGCATTAACCTGGGCTCTCATCTaGTACCTCTCAAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: DTAPGLSVSLGPKDKAALTWALI*YLSNSS
Trigger: GGAAGAGTTTGAGAGGTACAAGATGAGAGCCCAGGT...TAATGCTGCTTTATCCTTAGGCCCTAGAGATACTGAAAGTCCTGGGGCAGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp CTCAGTCCTAACCTCATCTTCTCCTCACATGCACACCATCAGAAGATACTGCCCCCCAGGTTACCATCTTaGGTATTCTTGCTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: LSPNLIFSSHAHHQKILPPRLPS*VFLLLR
Trigger: CCTCAAAAGCAAGAATACCAAAGATGGTAACCTGGG...GGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAAGATGAGGTTAGGACTGAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp TTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGCACCCCAACCCAGGTTTAAAGAAAGTGGGCTCATaGGCCGCTGCAAGTTGTAAT +
Preference number: 5 (lower is better)
Translates to: LIYLCQDPLGRKHPNPGLKKVGS*AAASCN
Trigger: ATTACAACTTGCAGCGGCCAATGAGCCCACTTTCTT...TAAACCTGGGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATAAGTAGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp GGAAAAGATAGCAAAGTCGTTGACTCACAATCTCAGGCCAACCTCAGGCAGATATTCTTCTACCTGAGATaGCTGACGGAGTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: GKDSKVVDSQSQANLRQIFFYLR*LTELIL
Trigger: GAGGATCAACTCCGTCAGCAATCTCAGGTAGAAGAA...TATCTGCCTGAGGTTGGCCTGAGATTGTGAGTCAACGACTTTGCTATCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp TTCTCCTCACATGCACACCATCAGAAGATACTGCCCCAGGACTTTCAGTATCTCGAGTCGCATTATCACTaGTTTCTCCTCTGGACTGAA +
Preference number: 5 (lower is better)
Translates to: FSSHAHHQKILPQDFQYLESHYH*FLLWTE
Trigger: TTCAGTCCAGAGGAGAAACAAGTGATAATGCGACTC...GAGATACTGAAAGTCCTGGGGCAGTATCTTCTGATGGTGTGCATGTGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp TTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGCACCCCAACCCAGGTTTAAAGATAGCAAAGTCGTaGACTCACAATCTCAGGCCA +
Preference number: 5 (lower is better)
Translates to: LIYLCQDPLGRKHPNPGLKIAKS*THNLRP
Trigger: TGGCCTGAGATTGTGAGTCAACGACTTTGCTATCTT...TAAACCTGGGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATAAGTAGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 90 bp AGCTTGGACTTCTCTTTAGAAGCAGGATTCTGGGACCAGGCTGCCTaGTTTAGCCCTCATAACATGTCTTTATTTCCTTGCACATCTTTG +
Preference number: 5 (lower is better)
Translates to: SLDFSLEAGFWDQAA*FSPHNMSLFPCTSL
Trigger: CAAAGATGTGCAAGGAAATAAAGACATGTTATGAGGGCTAAATCAGGCAGCCTGGTCCCAGAATCCTGCTTCTAAAGAGAAGTCCAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497650.1
CDS CCA 90 bp TTTCCCAGGTTACCATCTTTGGTATTCTTGCTTTTGAGGACAACCTaGGCTCTCATCTTGTACCTCTCAAACTCTTCCTTCAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: FPRLPSLVFLLLRTT*ALILYLSNSSFSCF
Trigger: GAAACAGCTGAAGGAAGAGTTTGAGAGGTACAAGATGAGAGCCCAGGTTGTCCTCAAAAGCAAGAATACCAAAGATGGTAACCTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp CCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCACTGGGCAGACCATCTTTGGTATTCTaGCTTTTGAGGACAACCTGG +
Preference number: 5 (lower is better)
Translates to: PFLKRAGLIYLCQDPLGRPSLVF*LLRTTW
Trigger: CCAGGTTGTCCTCAAAAGCAAGAATACCAAAGATGG...TCTGCCCAGTGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp TTAATCTACTTATGCCAAGACCCACTGGGCAGAAAGCACCCCAACCCAGGTTTAAGCTACAGCAATCTTTaGGAATTTTCTGCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: LIYLCQDPLGRKHPNPGLSYSNL*EFSAAN
Trigger: ATTTGCTGCAGAAAATTCCAAAAGATTGCTGTAGCT...TAAACCTGGGTTGGGGTGCTTTCTGCCCAGTGGGTCTTGGCATAAGTAGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 90 bp TCTTTGGATAAACTACTTCCTCTTTGCAGTGGGGTCTCTAGTTTGTaGCATGACTCCTGTAGAGCTTCTATAGAGTTCTGTAAACTTCTG +
Preference number: 5 (lower is better)
Translates to: SLDKLLPLCSGVSSL*HDSCRASIEFCKLL
Trigger: CAGAAGTTTACAGAACTCTATAGAAGCTCTACAGGAGTCATGGCACAAACTAGAGACCCCACTGCAAAGAGGAAGTAGTTTATCCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497650.1
CDS-3UTR CAA 90 bp AATAAGTTGCCTTTTCTTAAAAGAGCAGGATTAATCTACTTATGCCAAGACCCAGTGATAAGCCGGGCTTaGGTTTCTGCTATTTGCTCC +
Preference number: 5 (lower is better)
Translates to: NKLPFLKRAGLIYLCQDPVISRA*VSAICS
Trigger: GGAGCAAATAGCAGAAACCAAAGCCCGGCTTATCAC...TGGGTCTTGGCATAAGTAGATTAATCCTGCTCTTTTAAGAAAAGGCAACTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp TCAAGTCACTCAGGTTTAATGATTCCATCATTTGGACACATAAACTTCTGTTCCGCAAATTTTCCCCTTTaGCTGTCCCTACAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSHSGLMIPSFGHINFCSANFPL*LSLQRQ
Trigger: CTGCCTTTGTAGGGACAGCAAAAGGGGAAAATTTGC...GGAACAGAAGTTTATGTGTCCAAATGATGGAATCATTAAACCTGAGTGACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp TCAAGTCACTCAGGTTTAATGATTCCATCATTTGGACACATAAACTTCTGTTCCTTATCTTTCAGGACATaGACATCCAGACTGGACTCC +
Preference number: 5 (lower is better)
Translates to: SSHSGLMIPSFGHINFCSLSFRT*TSRLDS
Trigger: GGAGTCCAGTCTGGATGTCAATGTCCTGAAAGATAA...GGAACAGAAGTTTATGTGTCCAAATGATGGAATCATTAAACCTGAGTGACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp ACATCTTATTTTAAAACAGCCTTACCACTGTTCCAACTTCTGCACTTCTCAGTCTTAACTGAACTCCCTTaGGAGTCACATTTACTCCTA +
Preference number: 5 (lower is better)
Translates to: TSYFKTALPLFQLLHFSVLTELP*ESHLLL
Trigger: TAGGAGTAAATGTGACTCCAAAGGGAGTTCAGTTAA...GACTGAGAAGTGCAGAAGTTGGAACAGTGGTAAGGCTGTTTTAAAATAAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp ACATCTTATTTTAAAACAGCCTTACCACTGTTCCAACTTCTGCACTTCTCAGTCGACTGCCTGAATAAGTaGCCTTTTCTTAAAAGAGCA +
Preference number: 5 (lower is better)
Translates to: TSYFKTALPLFQLLHFSVDCLNK*PFLKRA
Trigger: TGCTCTTTTAAGAAAAGGCAACTTATTCAGGCAGTC...GACTGAGAAGTGCAGAAGTTGGAACAGTGGTAAGGCTGTTTTAAAATAAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS-3UTR CAA 90 bp TATGATGAAATCACAGAAAGATACATATTAGTCCAGTTAGTGGCCAAACATTGGGTTAGTGGCCAAACATaGGTCTTTAGAGTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: YDEITERYILVQLVAKHWVSGQT*VFRVQR
Trigger: TCTTTGGACTCTAAAGACCAATGTTTGGCCACTAAC...CCAATGTTTGGCCACTAACTGGACTAATATGTATCTTTCTGTGATTTCATCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp CGGAGGCGGGGCGACACTGGCACCAGAGGTGCGCACTaGCAGGGCTCGTTAGCGCTGGCCCAGAAGCCGCTC +
Preference number: 6 (lower is better)
Translates to: RRRGDTGTRGAH*QGSLALAQKPL
Trigger: GAGCGGCTTCTGGGCCAGCGCTAACGAGCCCTGGCAGTGCGCACCTCTGGTGCCAGTGTCGCCCCGCCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp GTTATCCCGGACCTAATGCGGAACGGCCGGACGGACTaGCGAAAGCGGCCGCCCGGTCCCAGGCCCGGAGGG +
Preference number: 6 (lower is better)
Translates to: VIPDLMRNGRTD*RKRPPGPRPGG
Trigger: CCCTCCGGGCCTGGGACCGGGCGGCCGCTTTCGCCAGTCCGTCCGGCCGTTCCGCATTAGGTCCGGGATAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp CCCAGGACCGCCACCACCCACAGGACTTCTGCGTCCTaGCAGCCCAGAGGCCAAGGCCACAGAACGCAGTTG +
Preference number: 6 (lower is better)
Translates to: PRTATTHRTSAS*QPRGQGHRTQL
Trigger: CAACTGCGTTCTGTGGCCTTGGCCTCTGGGCTGCCAGGACGCAGAAGTCCTGTGGGTGGTGGCGGTCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 72 bp CGGCCCCCTCGGCCCACGTCGGCCAGAGGGTTACGCTaGGCTCGGTCCCATCACGACATCCTAACTAAAGCT +
Preference number: 6 (lower is better)
Translates to: RPPRPTSARGLR*ARSHHDILTKA
Trigger: AGCTTTAGTTAGGATGTCGTGATGGGACCGAGCTCAGCGTAACCCTCTGGCCGACGTGGGCCGAGGGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 72 bp CCCACGTCAGCTTTCCAGCAGAACGGGAGAGGGCCGTaGAGACGCAGGCGGGGGCTTAAAGAAACAGCGAGC +
Preference number: 6 (lower is better)
Translates to: PTSAFQQNGRGP*RRRRGLKETAS
Trigger: GCTCGCTGTTTCTTTAAGCCCCCGCCTGCGTCTTCACGGCCCTCTCCCGTTCTGCTGGAAAGCTGACGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp TCGGTGAGCACAGCTAGGGCACGATCCCGCTGCTTGTaGAGCTCCTCCTCCAGTTTCAGTGTGCGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: SVSTARARSRCL*SSSSSFSVRSL
Trigger: CAGGGACCGCACACTGAAACTGGAGGAGGAGCTGCACAAGCAGCGGGATCGTGCCCTAGCTGTGCTCACCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 90 bp GGTGGTCCACGGGCCGGTCTGTCATCTTCTACCCCAAACTCACCCTaGGTGCTGGTGAGACTGGCCGCAGTATCCAAGCTAGTGGCGGTC +
Preference number: 6 (lower is better)
Translates to: GGPRAGLSSSTPNSP*VLVRLAAVSKLVAV
Trigger: GACCGCCACTAGCTTGGATACTGCGGCCAGTCTCACCAGCACCAAGGGTGAGTTTGGGGTAGAAGATGACAGACCGGCCCGTGGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp ACTCTCGGACCAACTGGCCTCTTCGGACTTTGGAGGTaGTGGTCCACGGGCCGGTCTGTCATCTTCTACCCC +
Preference number: 6 (lower is better)
Translates to: TLGPTGLFGLWR*WSTGRSVIFYP
Trigger: GGGGTAGAAGATGACAGACCGGCCCGTGGACCACCACCTCCAAAGTCCGAAGAGGCCAGTTGGTCCGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp AACGCCACTCTCGGACCAACTGGCCTCTTCGGACTTTaGAGGTGGTGGTCCACGGGCCGGTCTGTCATCTTC +
Preference number: 6 (lower is better)
Translates to: NATLGPTGLFGL*RWWSTGRSVIF
Trigger: GAAGATGACAGACCGGCCCGTGGACCACCACCTCCAAAGTCCGAAGAGGCCAGTTGGTCCGAGAGTGGCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp GAGCTCACGCAGCATCAAGGCATGGTCACTCTGCTCTaGGGCCCGATCATGCTGCTGCGTGATAAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: ELTQHQGMVTLL*GPIMLLRDKPG
Trigger: GCCCGGCTTATCACGCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCATGCCTTGATGCTGCGTGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp GTCCCTGATGTTCTTTTCGATGTGGCTCTGCAGGGCTaGAACCTCCTCACGATGCCGTTCGCCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: VPDVLFDVALQG*NLLTMPFALLQ
Trigger: CTGGAGGAGGGCGAACGGCATCGTGAGGAGGTTGCAGCCCTGCAGAGCCACATCGAAAAGAACATCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp CTGCTCTGGTCCCTGATGTTCTTTTCGATGTGGCTCTaGAGGGCTGCAACCTCCTCACGATGCCGTTCGCCC +
Preference number: 6 (lower is better)
Translates to: LLWSLMFFSMWL*RAATSSRCRSP
Trigger: GGGCGAACGGCATCGTGAGGAGGTTGCAGCCCTGCAGAGCCACATCGAAAAGAACATCAGGGACCAGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp GGAAGCTGGACACCTGCGAGGCCCACATCTGCCTCGTaGGATACCGACAGCACCTTGATGCTGGCCTCTAAT +
Preference number: 6 (lower is better)
Translates to: GSWTPARPTSAS*DTDSTLMLASN
Trigger: ATTAGAGGCCAGCATCAAGGTGCTGTCGGTATCCCACGAGGCAGATGTGGGCCTCGCAGGTGTCCAGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp TCATCCACAGAGTCAGGAAAGGTGAGGCCTGGAAGCTaGACACCTGCGAGGCCCACATCTGCCTCGTGGGAT +
Preference number: 6 (lower is better)
Translates to: SSTESGKVRPGS*TPARPTSASWD
Trigger: ATCCCACGAGGCAGATGTGGGCCTCGCAGGTGTCCAGCTTCCAGGCCTCACCTTTCCTGACTCTGTGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp CTCGGACCAACTGGCCTCTTCGGACTTTGGAGGTGGTaGTCCACGGGCCGGTCTGTCATCTTCTACCCCAAA +
Preference number: 6 (lower is better)
Translates to: LGPTGLFGLWRW*STGRSVIFYPK
Trigger: TTTGGGGTAGAAGATGACAGACCGGCCCGTGGACCACCACCTCCAAAGTCCGAAGAGGCCAGTTGGTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp TCCAGGTCACAGAGCTTCTCCACATCCAGGGTCACCTaGCTTTTCCTGGCCGCAACCTGCAGCAGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: SRSQSFSTSRVT*LFLAATCSSLF
Trigger: GAAGAGGCTGCTGCAGGTTGCGGCCAGGAAAAGCCAGGTGACCCTGGATGTGGAGAAGCTCTGTGACCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CCA 72 bp CCCTCCCTGCTCTGGTCCCTGATGTTCTTTTCGATGTaGCTCTGCAGGGCTGCAACCTCCTCACGATGCCGT +
Preference number: 6 (lower is better)
Translates to: PSLLWSLMFFSM*LCRAATSSRCR
Trigger: ACGGCATCGTGAGGAGGTTGCAGCCCTGCAGAGCCACATCGAAAAGAACATCAGGGACCAGAGCAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 90 bp CAGCTTCTGGAGCTCACGCAGCATCAAGGCATGGTCACTCTGCTCTaGGGCCCGATCATGCTGCTGCGTGATAAGCCGGGCTTTGGTTTC +
Preference number: 6 (lower is better)
Translates to: QLLELTQHQGMVTLL*GPIMLLRDKPGFGF
Trigger: GAAACCAAAGCCCGGCTTATCACGCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCATGCCTTGATGCTGCGTGAGCTCCAGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 72 bp TCCAAGCTAGTGGCGGTCCCAGTGCTATCCTCGCTGTaGGTGGAGCACCGGTCATCCACAGAGTCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: SKLVAVPVLSSL*VEHRSSTESGK
Trigger: CTTTCCTGACTCTGTGGATGACCGGTGCTCCACTCACAGCGAGGATAGCACTGGGACCGCCACTAGCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 72 bp CAGAACGCAGTTGCTCCAGTTCCAAGTCCTTCTCGGTaGGCACAGCTAGGGCACGATCCCGCTGCTTGTGCA +
Preference number: 6 (lower is better)
Translates to: QNAVAPVPSPSR*AQLGHDPAACA
Trigger: TGCACAAGCAGCGGGATCGTGCCCTAGCTGTGCTCACCGAGAAGGACTTGGAACTGGAGCAACTGCGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp CGGGCCGGTCTGTCATCTTCTACCCCAAACTCACCCTaGGTGCTGGTGAGACTGGCCGCAGTATCCAAGCTA +
Preference number: 6 (lower is better)
Translates to: RAGLSSSTPNSP*VLVRLAAVSKL
Trigger: TAGCTTGGATACTGCGGCCAGTCTCACCAGCACCAAGGGTGAGTTTGGGGTAGAAGATGACAGACCGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 72 bp GGCCCACATCTGCCTCGTGGGATACCGACAGCACCTTaGTGCTGGCCTCTAATGCCTCTTTCTCCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: GPHLPRGIPTAP*CWPLMPLSPSA
Trigger: TGCTGAAGGAGAAAGAGGCATTAGAGGCCAGCATCAAGGTGCTGTCGGTATCCCACGAGGCAGATGTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 72 bp TCCAGGTCCAGCTGCAGAATGCGCTCCTTCAGCTTCTaGATGGCCAGCTGGTCCTTCTGCTTGGCTTTCTCG +
Preference number: 6 (lower is better)
Translates to: SRSSCRMRSFSF*MASWSFCLAFS
Trigger: CGAGAAAGCCAAGCAGAAGGACCAGCTGGCCATTCAGAAGCTGAAGGAGCGCATTCTGCAGCTGGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS GCA 72 bp TTCTGGAGCTCACGCAGCATCAAGGCATGGTCACTCTaGTCTTGGGCCCGATCATGCTGCTGCGTGATAAGC +
Preference number: 6 (lower is better)
Translates to: FWSSRSIKAWSL*SWARSCCCVIS
Trigger: GCTTATCACGCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCATGCCTTGATGCTGCGTGAGCTCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp GACTGGACTCCTCTCCATGGCTGTCTAAAGGGGACCTaGTGGAGGCTGCTAGAGCCAGTGTCTTGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: DWTPLHGCLKGT*WRLLEPVSCSP
Trigger: TGGAGAACAAGACACTGGCTCTAGCAGCCTCCAGCAGGTCCCCTTTAGACAGCCATGGAGAGGAGTCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CCA 72 bp GGTCCAGCTGCAGAATGCGCTCCTTCAGCTTCTGAATaGCCAGCTGGTCCTTCTGCTTGGCTTTCTCGTAGG +
Preference number: 6 (lower is better)
Translates to: GPAAECAPSASE*PAGPSAWLSRR
Trigger: CCTACGAGAAAGCCAAGCAGAAGGACCAGCTGGCCATTCAGAAGCTGAAGGAGCGCATTCTGCAGCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CCA 72 bp TGGACTCCTCTCCATGGCTGTCTAAAGGGGACCTGCTaGAGGCTGCTAGAGCCAGTGTCTTGTTCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: WTPLHGCLKGTC*RLLEPVSCSPG
Trigger: ACCTGGAGAACAAGACACTGGCTCTAGCAGCCTCCAGCAGGTCCCCTTTAGACAGCCATGGAGAGGAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CCA 72 bp AAGTGCAAGATAGTCAGTATGGCTGTGAGAGTCTGCTaGCGGCCCAGGGAGTCAGGTAAGGTCAGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: KCKIVSMAVRVC*RPRESGKVRKR
Trigger: CCGCTTCCTGACCTTACCTGACTCCCTGGGCCGCCAGCAGACTCTCACAGCCATACTGACTATCTTGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp AGGCCCACATCTGCCTCGTGGGATACCGACAGCACCTaGATGCTGGCCTCTAATGCCTCTTTCTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: RPTSASWDTDST*MLASNASFSFS
Trigger: GCTGAAGGAGAAAGAGGCATTAGAGGCCAGCATCAAGGTGCTGTCGGTATCCCACGAGGCAGATGTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 90 bp ACACCTGCGAGGCCCACATCTGCCTCGTGGGATACCGACAGCACCTaGATGCTGGCCTCTAATGCCTCTTTCTCCTTCAGCAGGCTTTTA +
Preference number: 6 (lower is better)
Translates to: TPARPTSASWDTDST*MLASNASFSFSRLL
Trigger: TAAAAGCCTGCTGAAGGAGAAAGAGGCATTAGAGGCCAGCATCAAGGTGCTGTCGGTATCCCACGAGGCAGATGTGGGCCTCGCAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 90 bp AGCCTGGAAATGGCTCTTAAGGCGGGCAGCCTCTTCCTGAAGTTCTaGCAGCCGGGGATCTGGCTGATTCTTCTCATCTCGAATGGCCTG +
Preference number: 6 (lower is better)
Translates to: SLEMALKAGSLFLKF*QPGIWLILLISNGL
Trigger: CAGGCCATTCGAGATGAGAAGAATCAGCCAGATCCCCGGCTGCAAGAACTTCAGGAAGAGGCTGCCCGCCTTAAGAGCCATTTCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp CAGGCTTTTATAGGCACGGACCACATCCTTGAGCCGTaGCTGGTACTGGAGAAGCTGCTTCTTCTGGGTCTC +
Preference number: 6 (lower is better)
Translates to: QAFIGTDHILEP*LVLEKLLLLGL
Trigger: GAGACCCAGAAGAAGCAGCTTCTCCAGTACCAGGCACGGCTCAAGGATGTGGTCCGTGCCTATAAAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp GCATGGTCACTCTGCTCTTGGGCCCGATCATGCTGCTaGGTGATAAGCCGGGCTTTGGTTTCTGCTATTTGC +
Preference number: 6 (lower is better)
Translates to: AWSLCSWARSCC*VISRALVSAIC
Trigger: GCAAATAGCAGAAACCAAAGCCCGGCTTATCACGCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp ATCAAGGCATGGTCACTCTGCTCTTGGGCCCGATCATaGTGCTGCGTGATAAGCCGGGCTTTGGTTTCTGCT +
Preference number: 6 (lower is better)
Translates to: IKAWSLCSWARS*CCVISRALVSA
Trigger: AGCAGAAACCAAAGCCCGGCTTATCACGCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCATGCCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp CTCAGTGATGTGATCTCCACCTCCTTGCGGGCCAGTTaGTCAGCGTACAGAAAGAAAGTGGGCTCATTGGCC +
Preference number: 6 (lower is better)
Translates to: LSDVISTSLRAS*SAYRKKVGSLA
Trigger: GGCCAATGAGCCCACTTTCTTTCTGTACGCTGAGCAACTGGCCCGCAAGGAGGTGGAGATCACATCACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp CTGAAGTGCAAGATAGTCAGTATGGCTGTGAGAGTCTaGTGGCGGCCCAGGGAGTCAGGTAAGGTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: LKCKIVSMAVRV*WRPRESGKVRK
Trigger: CTTCCTGACCTTACCTGACTCCCTGGGCCGCCAGCAGACTCTCACAGCCATACTGACTATCTTGCACTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp GGCAGCCTCTTCCTGAAGTTCTTGCAGCCGGGGATCTaGCTGATTCTTCTCATCTCGAATGGCCTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: GSLFLKFLQPGI*LILLISNGLQF
Trigger: GAACTGCAGGCCATTCGAGATGAGAAGAATCAGCCAGATCCCCGGCTGCAAGAACTTCAGGAAGAGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp CCTTCAGCTTCTGAATGGCCAGCTGGTCCTTCTGCTTaGCTTTCTCGTAGGTGCCTAGCAGCTCAGACACCT +
Preference number: 6 (lower is better)
Translates to: PSASEWPAGPSA*LSRRCLAAQTP
Trigger: AGGTGTCTGAGCTGCTAGGCACCTACGAGAAAGCCAAGCAGAAGGACCAGCTGGCCATTCAGAAGCTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CCA 72 bp CCTTGCGGGCCAGTTGCTCAGCGTACAGAAAGAAAGTaGGCTCATTGGCCGCTGCAAGTTGTAATGCTTGGG +
Preference number: 6 (lower is better)
Translates to: PCGPVAQRTERK*AHWPLQVVMLG
Trigger: CCCAAGCATTACAACTTGCAGCGGCCAATGAGCCCACTTTCTTTCTGTACGCTGAGCAACTGGCCCGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 90 bp TCCAGCCTGTGCTTCTGCTTCCTCAGTGATGTGATCTCCACCTCCTaGCGGGCCAGTTGCTCAGCGTACAGAAAGAAAGTGGGCTCATTG +
Preference number: 6 (lower is better)
Translates to: SSLCFCFLSDVISTS*RASCSAYRKKVGSL
Trigger: CAATGAGCCCACTTTCTTTCTGTACGCTGAGCAACTGGCCCGCAAGGAGGTGGAGATCACATCACTGAGGAAGCAGAAGCACAGGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 72 bp CCCCGAAATTCATCCCAAACTTCTCCATGGAGGGTCTaGACGGATTGCCCCACGTCAGCTTTCCAGCAGAAC +
Preference number: 6 (lower is better)
Translates to: PRNSSQTSPWRV*TDCPTSAFQQN
Trigger: GTTCTGCTGGAAAGCTGACGTGGGGCAATCCGTTCAGACCCTCCATGGAGAAGTTTGGGATGAATTTCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 72 bp CCTTCAGCAGGCTTTTATAGGCACGGACCACATCCTTaGGCCGTGCCTGGTACTGGAGAAGCTGCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: PSAGFYRHGPHP*AVPGTGEAASS
Trigger: AGAAGAAGCAGCTTCTCCAGTACCAGGCACGGCTCAAGGATGTGGTCCGTGCCTATAAAAGCCTGCTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp ACCACATCCTTGAGCCGTGCCTGGTACTGGAGAAGCTaGTTCTTCTGGGTCTCTATAGTCTCCAGCAAGTCC +
Preference number: 6 (lower is better)
Translates to: TTSLSRAWYWRS*FFWVSIVSSKS
Trigger: GGACTTGCTGGAGACTATAGAGACCCAGAAGAAGCAGCTTCTCCAGTACCAGGCACGGCTCAAGGATGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp AAGGCATGGTCACTCTGCTCTTGGGCCCGATCATGCTaGTGCGTGATAAGCCGGGCTTTGGTTTCTGCTATT +
Preference number: 6 (lower is better)
Translates to: KAWSLCSWARSC*CVISRALVSAI
Trigger: AATAGCAGAAACCAAAGCCCGGCTTATCACGCAGCAGCATGATCGGGCCCAAGAGCAGAGTGACCATGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp ACATCCAGGGTCACCTGGCTTTTCCTGGCCGCAACCTaGAGCAGCCTCTTCAGCTTCTCCATCTTATCTTTC +
Preference number: 6 (lower is better)
Translates to: TSRVTWLFLAAT*SSLFSFSILSF
Trigger: GAAAGATAAGATGGAGAAGCTGAAGAGGCTGCTGCAGGTTGCGGCCAGGAAAAGCCAGGTGACCCTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CCA 72 bp GGCATCATCTCTTGCCAGAAGGCCACCAGCTGGCACTaGTTGGGAGTCGCATTATCACTTGTTTCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: GIISCQKATSWH*LGVALSLVSPL
Trigger: CAGAGGAGAAACAAGTGATAATGCGACTCCCAACCAGTGCCAGCTGGTGGCCTTCTGGCAAGAGATGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp AATTCTCCCTCCAGGCGGGCCCTCTCCTCCTCCGCCTaGTTACTGGCATCCTCTAAGTCCTGTTTCATCTTT +
Preference number: 6 (lower is better)
Translates to: NSPSRRALSSSA*LLASSKSCFIF
Trigger: AAAGATGAAACAGGACTTAGAGGATGCCAGTAACAAGGCGGAGGAGGAGAGGGCCCGCCTGGAGGGAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp CTCCAGGGCTGCCACCCTCTGTTCTTCTACCTGAGATaGCTGACGGAGTTGATCCTCTGCAAGAGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: LQGCHPLFFYLR*LTELILCKSCL
Trigger: AAGACAGCTCTTGCAGAGGATCAACTCCGTCAGCAATCTCAGGTAGAAGAACAGAGGGTGGCAGCCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CAA 90 bp AGAAGCTGCTTCTTCTGGGTCTCTATAGTCTCCAGCAAGTCCTTCTaGCTCGGGCCGCCCCCGAAATTCATCCCAAACTTCTCCATGGAG +
Preference number: 6 (lower is better)
Translates to: RSCFFWVSIVSSKSF*LGPPPKFIPNFSME
Trigger: CTCCATGGAGAAGTTTGGGATGAATTTCGGGGGCGGCCCGAGCAAGAAGGACTTGCTGGAGACTATAGAGACCCAGAAGAAGCAGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 90 bp TCCTTGCGGGCCAGTTGCTCAGCGTACAGAAAGAAAGTGGGCTCATaGGCCGCTGCAAGTTGTAATGCTTGGGTCAGGCTATCAGAGGAT +
Preference number: 6 (lower is better)
Translates to: SLRASCSAYRKKVGS*AAASCNAWVRLSED
Trigger: ATCCTCTGATAGCCTGACCCAAGCATTACAACTTGCAGCGGCCAATGAGCCCACTTTCTTTCTGTACGCTGAGCAACTGGCCCGCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 90 bp CAGGGCTGCCACCCTCTGTTCTTCTACCTGAGATTGCTGACGGAGTaGATCCTCTGCAAGAGCTGTCTTAGTCTTCCCCAGCTTGGACTT +
Preference number: 6 (lower is better)
Translates to: QGCHPLFFYLRLLTE*ILCKSCLSLPQLGL
Trigger: AAGTCCAAGCTGGGGAAGACTAAGACAGCTCTTGCAGAGGATCAACTCCGTCAGCAATCTCAGGTAGAAGAACAGAGGGTGGCAGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497650.1
CDS GCA 72 bp CTTGGTCTGCAGTTCAAATCCTTCCATCTGTTCAGCTaGATATGCTCGTCCTGCCAAGGCTTCTCGGGTCTC +
Preference number: 6 (lower is better)
Translates to: LGLQFKSFHLFS*ICSSCQGFSGL
Trigger: GAGACCCGAGAAGCCTTGGCAGGACGAGCATATGCAGCTGAACAGATGGAAGGATTTGAACTGCAGACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp TGGCCAGCTGGTCCTTCTGCTTGGCTTTCTCGTAGGTaGCTAGCAGCTCAGACACCTCGGATATTTGATTCT +
Preference number: 6 (lower is better)
Translates to: WPAGPSAWLSRR*LAAQTPRIFDS
Trigger: AGAATCAAATATCCGAGGTGTCTGAGCTGCTAGGCACCTACGAGAAAGCCAAGCAGAAGGACCAGCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS GCA 72 bp TTCCTTCAGCTGTTTCAGCTCCTGTTGGTAATAGAGTaGAGTAGCCTTCTCCCCATCAGCAGCCTCCGAGCT +
Preference number: 6 (lower is better)
Translates to: FLQLFQLLLVIE*SSLLPISSLRA
Trigger: AGCTCGGAGGCTGCTGATGGGGAGAAGGCTACTGCACTCTATTACCAACAGGAGCTGAAACAGCTGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS GCA 72 bp ATACTTCTCCTTCAGCTCTGCAAGCTGTTCCTGGGCTaGCTCCAGCTCCTTTCCCAGGTTACCATCTTTGGT +
Preference number: 6 (lower is better)
Translates to: ILLLQLCKLFLG*LQLLSQVTIFG
Trigger: ACCAAAGATGGTAACCTGGGAAAGGAGCTGGAGGCAGCCCAGGAACAGCTTGCAGAGCTGAAGGAGAAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp TTGAGCCGTGCCTGGTACTGGAGAAGCTGCTTCTTCTaGGTCTCTATAGTCTCCAGCAAGTCCTTCTTGCTC +
Preference number: 6 (lower is better)
Translates to: LSRAWYWRSCFF*VSIVSSKSFLL
Trigger: GAGCAAGAAGGACTTGCTGGAGACTATAGAGACCCAGAAGAAGCAGCTTCTCCAGTACCAGGCACGGCTCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp AAAGTGGGCTCATTGGCCGCTGCAAGTTGTAATGCTTaGGTCAGGCTATCAGAGGATGATGTGTCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: KVGSLAAASCNA*VRLSEDDVSAG
Trigger: CCCAGCTGACACATCATCCTCTGATAGCCTGACCCAAGCATTACAACTTGCAGCGGCCAATGAGCCCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp TCATCTCTTGCCAGAAGGCCACCAGCTGGCACTGGTTaGGAGTCGCATTATCACTTGTTTCTCCTCTGGACT +
Preference number: 6 (lower is better)
Translates to: SSLARRPPAGTG*ESHYHLFLLWT
Trigger: AGTCCAGAGGAGAAACAAGTGATAATGCGACTCCCAACCAGTGCCAGCTGGTGGCCTTCTGGCAAGAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp TTCTTCTGGGTCTCTATAGTCTCCAGCAAGTCCTTCTaGCTCGGGCCGCCCCCGAAATTCATCCCAAACTTC +
Preference number: 6 (lower is better)
Translates to: FFWVSIVSSKSF*LGPPPKFIPNF
Trigger: GAAGTTTGGGATGAATTTCGGGGGCGGCCCGAGCAAGAAGGACTTGCTGGAGACTATAGAGACCCAGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp GCCAGTTGCTCAGCGTACAGAAAGAAAGTGGGCTCATaGGCCGCTGCAAGTTGTAATGCTTGGGTCAGGCTA +
Preference number: 6 (lower is better)
Translates to: ASCSAYRKKVGS*AAASCNAWVRL
Trigger: TAGCCTGACCCAAGCATTACAACTTGCAGCGGCCAATGAGCCCACTTTCTTTCTGTACGCTGAGCAACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp TGCTTCTGCTTCCTCAGTGATGTGATCTCCACCTCCTaGCGGGCCAGTTGCTCAGCGTACAGAAAGAAAGTG +
Preference number: 6 (lower is better)
Translates to: CFCFLSDVISTS*RASCSAYRKKV
Trigger: CACTTTCTTTCTGTACGCTGAGCAACTGGCCCGCAAGGAGGTGGAGATCACATCACTGAGGAAGCAGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 90 bp GCCAGAAGGCCACCAGCTGGCACTGGTTGGGAGTCGCATTATCACTaGTTTCTCCTCTGGACTGAAGTGCAAGATAGTCAGTATGGCTGT +
Preference number: 6 (lower is better)
Translates to: ARRPPAGTGWESHYH*FLLWTEVQDSQYGC
Trigger: ACAGCCATACTGACTATCTTGCACTTCAGTCCAGAGGAGAAACAAGTGATAATGCGACTCCCAACCAGTGCCAGCTGGTGGCCTTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 90 bp ACCTGCAGCAGCCTCTTCAGCTTCTCCATCTTATCTTTCAGGACATaGACATCCAGACTGGACTCCTCTCCATGGCTGTCTAAAGGGGAC +
Preference number: 6 (lower is better)
Translates to: TCSSLFSFSILSFRT*TSRLDSSPWLSKGD
Trigger: GTCCCCTTTAGACAGCCATGGAGAGGAGTCCAGTCTGGATGTCAATGTCCTGAAAGATAAGATGGAGAAGCTGAAGAGGCTGCTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CCA 72 bp CCAGTTGCTCAGCGTACAGAAAGAAAGTGGGCTCATTaGCCGCTGCAAGTTGTAATGCTTGGGTCAGGCTAT +
Preference number: 6 (lower is better)
Translates to: PVAQRTERKWAH*PLQVVMLGSGY
Trigger: ATAGCCTGACCCAAGCATTACAACTTGCAGCGGCCAATGAGCCCACTTTCTTTCTGTACGCTGAGCAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp CCACCAGCTGGCACTGGTTGGGAGTCGCATTATCACTaGTTTCTCCTCTGGACTGAAGTGCAAGATAGTCAG +
Preference number: 6 (lower is better)
Translates to: PPAGTGWESHYH*FLLWTEVQDSQ
Trigger: CTGACTATCTTGCACTTCAGTCCAGAGGAGAAACAAGTGATAATGCGACTCCCAACCAGTGCCAGCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp CACCCTCTGTTCTTCTACCTGAGATTGCTGACGGAGTaGATCCTCTGCAAGAGCTGTCTTAGTCTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: HPLFFYLRLLTE*ILCKSCLSLPQ
Trigger: CTGGGGAAGACTAAGACAGCTCTTGCAGAGGATCAACTCCGTCAGCAATCTCAGGTAGAAGAACAGAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497650.1
CDS CAA 90 bp CATCTTGTACCTCTCAAACTCTTCCTTCAGCTGTTTCAGCTCCTGTaGGTAATAGAGTGCAGTAGCCTTCTCCCCATCAGCAGCCTCCGA +
Preference number: 6 (lower is better)
Translates to: HLVPLKLFLQLFQLL*VIECSSLLPISSLR
Trigger: TCGGAGGCTGCTGATGGGGAGAAGGCTACTGCACTCTATTACCAACAGGAGCTGAAACAGCTGAAGGAAGAGTTTGAGAGGTACAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CAA 90 bp TGGGCTGCCTCCAGCTCCTTTCCCAGGTTACCATCTTTGGTATTCTaGCTTTTGAGGACAACCTGGGCTCTCATCTTGTACCTCTCAAAC +
Preference number: 6 (lower is better)
Translates to: WAASSSFPRLPSLVF*LLRTTWALILYLSN
Trigger: GTTTGAGAGGTACAAGATGAGAGCCCAGGTTGTCCTCAAAAGCAAGAATACCAAAGATGGTAACCTGGGAAAGGAGCTGGAGGCAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 90 bp TATTTGATTCTCCAGGGCTGCCACCCTCTGTTCTTCTACCTGAGATaGCTGACGGAGTTGATCCTCTGCAAGAGCTGTCTTAGTCTTCCC +
Preference number: 6 (lower is better)
Translates to: YLILQGCHPLFFYLR*LTELILCKSCLSLP
Trigger: GGGAAGACTAAGACAGCTCTTGCAGAGGATCAACTCCGTCAGCAATCTCAGGTAGAAGAACAGAGGGTGGCAGCCCTGGAGAATCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497650.1
CDS TCA 72 bp GTGACTGTAGCCAAAGAACTGGTCAAAGTAGCCAACTaGGTCTTCAGCTGGTGCAGTCTTTTGTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: VTVAKELVKVAN*VFSWCSLLSTS
Trigger: GGAGGTGGACAAAAGACTGCACCAGCTGAAGACTCAGTTGGCTACTTTGACCAGTTCTTTGGCTACAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS GCA 72 bp AGTTCACTTTTCAGCTCCTCCACCTCACGGGTCAGCTaGTTGGTCTGCAGTTCAAATCCTTCCATCTGTTCA +
Preference number: 6 (lower is better)
Translates to: SSLFSSSTSRVS*LVCSSNPSICS
Trigger: TGAACAGATGGAAGGATTTGAACTGCAGACCAAGCAGCTGACCCGTGAGGTGGAGGAGCTGAAAAGTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp GAAAATGGCATCATCTCTTGCCAGAAGGCCACCAGCTaGCACTGGTTGGGAGTCGCATTATCACTTGTTTCT +
Preference number: 6 (lower is better)
Translates to: ENGIISCQKATS*HWLGVALSLVS
Trigger: AGAAACAAGTGATAATGCGACTCCCAACCAGTGCCAGCTGGTGGCCTTCTGGCAAGAGATGATGCCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp CCTCTCAAACTCTTCCTTCAGCTGTTTCAGCTCCTGTaGGTAATAGAGTGCAGTAGCCTTCTCCCCATCAGC +
Preference number: 6 (lower is better)
Translates to: PLKLFLQLFQLL*VIECSSLLPIS
Trigger: GCTGATGGGGAGAAGGCTACTGCACTCTATTACCAACAGGAGCTGAAACAGCTGAAGGAAGAGTTTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS GCA 72 bp TTCTTCTACCTGAGATTGCTGACGGAGTTGATCCTCTaGAAGAGCTGTCTTAGTCTTCCCCAGCTTGGACTT +
Preference number: 6 (lower is better)
Translates to: FFYLRLLTELIL*KSCLSLPQLGL
Trigger: AAGTCCAAGCTGGGGAAGACTAAGACAGCTCTTGCAGAGGATCAACTCCGTCAGCAATCTCAGGTAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497650.1
CDS CAA 72 bp CACCCTCTGTTCTTCTACCTGAGATTGCTGACGGAGTaGATCCTCTGCAAGAGCTGTCTTTCTCATTTCCTG +
Preference number: 6 (lower is better)
Translates to: HPLFFYLRLLTE*ILCKSCLSHFL
Trigger: CAGGAAATGAGAAAGACAGCTCTTGCAGAGGATCAACTCCGTCAGCAATCTCAGGTAGAAGAACAGAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp AGCCTCTTCAGCTTCTCCATCTTATCTTTCAGGACATaGACATCCAGACTGGACTCCTCTCCATGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: SLFSFSILSFRT*TSRLDSSPWLS
Trigger: AGACAGCCATGGAGAGGAGTCCAGTCTGGATGTCAATGTCCTGAAAGATAAGATGGAGAAGCTGAAGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321407.3
ENST00000497650.1
CDS CAA 90 bp TATTTGATTCTCCAGGGCTGCCACCCTCTGTTCTTCTACCTGAGATaGCTGACGGAGTTGATCCTCTGCAAGAGCTGTCTTTCTCATTTC +
Preference number: 6 (lower is better)
Translates to: YLILQGCHPLFFYLR*LTELILCKSCLSHF
Trigger: GAAATGAGAAAGACAGCTCTTGCAGAGGATCAACTCCGTCAGCAATCTCAGGTAGAAGAACAGAGGGTGGCAGCCCTGGAGAATCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 90 bp CCATCTTTGGTATTCTTGCTTTTGAGGACAACCTGGGCTCTCATCTaGTACCTCTCAAACTCTTCCTTCAGCTGTTTCAGCTCCTGTTGG +
Preference number: 6 (lower is better)
Translates to: PSLVFLLLRTTWALI*YLSNSSFSCFSSCW
Trigger: CCAACAGGAGCTGAAACAGCTGAAGGAAGAGTTTGAGAGGTACAAGATGAGAGCCCAGGTTGTCCTCAAAAGCAAGAATACCAAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CCA 72 bp ACTGGTTGGGAGTCGCATTATCACTTGTTTCTCCTCTaGACTGAAGTGCAAGATAGTCAGTATGGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: TGWESHYHLFLL*TEVQDSQYGCE
Trigger: CTCACAGCCATACTGACTATCTTGCACTTCAGTCCAGAGGAGAAACAAGTGATAATGCGACTCCCAACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp TCCAGCTCCTTTCCCAGGTTACCATCTTTGGTATTCTaGCTTTTGAGGACAACCTGGGCTCTCATCTTGTAC +
Preference number: 6 (lower is better)
Translates to: SSSFPRLPSLVF*LLRTTWALILY
Trigger: GTACAAGATGAGAGCCCAGGTTGTCCTCAAAAGCAAGAATACCAAAGATGGTAACCTGGGAAAGGAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 72 bp CCTTTCCCAGGTTACCATCTTTGGTATTCTTGCTTTTaGGGACAACCTGGGCTCTCATCTTGTACCTCTCAA +
Preference number: 6 (lower is better)
Translates to: PFPGYHLWYSCF*GQPGLSSCTSQ
Trigger: TTGAGAGGTACAAGATGAGAGCCCAGGTTGTCCTCAAAAGCAAGAATACCAAAGATGGTAACCTGGGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp GTATTCTTGCTTTTGAGGACAACCTGGGCTCTCATCTaGTACCTCTCAAACTCTTCCTTCAGCTGTTTCAGC +
Preference number: 6 (lower is better)
Translates to: VFLLLRTTWALI*YLSNSSFSCFS
Trigger: GCTGAAACAGCTGAAGGAAGAGTTTGAGAGGTACAAGATGAGAGCCCAGGTTGTCCTCAAAAGCAAGAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp TCCTTTCCCAGGTTACCATCTTTGGTATTCTTGCTTTaGAGGACAACCTGGGCTCTCATCTTGTACCTCTCA +
Preference number: 6 (lower is better)
Translates to: SFPRLPSLVFLL*RTTWALILYLS
Trigger: TGAGAGGTACAAGATGAGAGCCCAGGTTGTCCTCAAAAGCAAGAATACCAAAGATGGTAACCTGGGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS TCA 72 bp TTCTCTTTAGAAGCAGGATTCTGGGACCAGGCTGCCTaGTTTAGCCCTCATAACATGTCTTTATTTCCTTGC +
Preference number: 6 (lower is better)
Translates to: FSLEAGFWDQAA*FSPHNMSLFPC
Trigger: GCAAGGAAATAAAGACATGTTATGAGGGCTAAATCAGGCAGCCTGGTCCCAGAATCCTGCTTCTAAAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497650.1
CDS GCA 72 bp AAACTACTTCCTCTTTGCAGTGGGGTCTCTAGTTTGTaGCATGACTCCTGTAGAGCTTCTATAGAGTTCTGT +
Preference number: 6 (lower is better)
Translates to: KLLPLCSGVSSL*HDSCRASIEFC
Trigger: ACAGAACTCTATAGAAGCTCTACAGGAGTCATGGCACAAACTAGAGACCCCACTGCAAAGAGGAAGTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497650.1
CDS CAA 72 bp GATAAACTACTTCCTCTTTGCAGTGGGGTCTCTAGTTaGTGCCATGACTCCTGTAGAGCTTCTATAGAGTTC +
Preference number: 6 (lower is better)
Translates to: DKLLPLCSGVSS*CHDSCRASIEF
Trigger: GAACTCTATAGAAGCTCTACAGGAGTCATGGCACAAACTAGAGACCCCACTGCAAAGAGGAAGTAGTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497650.1
CDS CCA 72 bp TTACCATCTTTGGTATTCTTGCTTTTGAGGACAACCTaGGCTCTCATCTTGTACCTCTCAAACTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: LPSLVFLLLRTT*ALILYLSNSSF
Trigger: GAAGGAAGAGTTTGAGAGGTACAAGATGAGAGCCCAGGTTGTCCTCAAAAGCAAGAATACCAAAGATGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321407.3
CDS CAA 72 bp AGCCCTCATAACATGTCTTTATTTCCTTGCACATCTTaGGATAAACTACTTCCTCTTTGCAGTGGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: SPHNMSLFPCTS*DKLLPLCSGVS
Trigger: AGAGACCCCACTGCAAAGAGGAAGTAGTTTATCCAAAGATGTGCAAGGAAATAAAGACATGTTATGAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497650.1
CDS CAA 90 bp ACATCTTTGGATAAACTACTTCCTCTTTGCAGTGGGGTCTCTAGTTaGTGCCATGACTCCTGTAGAGCTTCTATAGAGTTCTGTAAACTT +
Preference number: 6 (lower is better)
Translates to: TSLDKLLPLCSGVSS*CHDSCRASIEFCKL
Trigger: AAGTTTACAGAACTCTATAGAAGCTCTACAGGAGTCATGGCACAAACTAGAGACCCCACTGCAAAGAGGAAGTAGTTTATCCAAAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497650.1