Pregenerated sensors for GCA (Homo sapiens)
Ensembl gene IDs: ENSG00000115271Ensembl transcript IDs: ENST00000233612.8, ENST00000414723.1, ENST00000429691.6, ENST00000437150.7, ENST00000446271.5, ENST00000453113.6, ENST00000473240.5, ENST00000479199.1, ENST00000481161.5, ENST00000487445.6
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATaGAACTCAAATTCAGATGATCCTCAACTCATGGGAATTCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: AFHANKKPRDKTVHG*NSNSDDPQLMGIPG Trigger: CCCTGGAATTCCCATGAGTTGAGGATCATCTGAATTTGAGTTGCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414723.1 |
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| 3UTR CCA 90 bp | CATAATCGACCGCAGAATAGTTCAGTAACGACCATCTGTATAACCTaGATGTTAAGATTACAGGTTGCTGAGCGACATTATCACCATTCG | + |
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Preference number: 1 (lower is better) Translates to: HNRPQNSSVTTICIT*MLRLQVAERHYHHS Trigger: CGAATGGTGATAATGTCGCTCAGCAACCTGTAATCTTAACATCCAGGTTATACAGATGGTCGTTACTGAACTATTCTGCGGTCGATTATG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGACCACGCAGAAAAGTTaGTGTGGTGCCTACTATGCT | + |
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Preference number: 2 (lower is better) Translates to: LSDIITIRCERHLVFSHLTTQKS*CGAYYA Trigger: AGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGT...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGCTGTGGTGCCTACTATaGTCAAAACACCACATCACA | + |
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Preference number: 2 (lower is better) Translates to: LSDIITIRCERHLVFSHLLWCLL*SKHHIT Trigger: TGTGATGTGGTGTTTTGAGCATAGTAGGCACCACAG...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGACACTAAAGATCTGGTaGTTCTACGTCGCATTTTCG | + |
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Preference number: 2 (lower is better) Translates to: LSDIITIRCERHLVFSHLTLKIW*FYVAFS Trigger: CGAAAATGCGACGTAGAATCACCAGATCTTTAGTGT...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGTCACTAAGACAGACATaGGGTGTTTGCCAAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSDIITIRCERHLVFSHLSLRQT*GVCQER Trigger: TCTTTCTTGGCAAACACCTCATGTCTGTCTTAGTGA...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGGGATGCCATTTTAGGTaGACTATGTCTTCACTAATG | + |
|
Preference number: 2 (lower is better) Translates to: LSDIITIRCERHLVFSHLGCHFR*TMSSLM Trigger: CATTAGTGAAGACATAGTTCACCTAAAATGGCATCC...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| 3UTR-3UTR TCA 90 bp | ACATGCATGTTAGGAAACTCCAATTTCTCTTGCATGGAGACTCCTATTTACTGCCAACTCAAATTCAGATaGTCCTCAACTCATGGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: TCMLGNSNFSCMETPIYCQLKFR*SSTHGN Trigger: ATTCCCATGAGTTGAGGATCATCTGAATTTGAGTTG...GCAGTAAATAGGAGTCTCCATGCAAGAGAAATTGGAGTTTCCTAACATGCATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414723.1 |
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| 3UTR-3UTR CCA 90 bp | TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATATGATCCTCAACTCATaGGAATTCCAGGGGGATAAA | + |
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Preference number: 2 (lower is better) Translates to: FTAFTKPVLRYENAFHANMILNS*EFQGDK Trigger: TTTATCCCCCTGGAATTCCCATGAGTTGAGGATCAT...ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000414723.1 |
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| 3UTR-3UTR CAA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGTACCACGCAGAAAAGTaGCTGTGGTGCCTACTATGC | + |
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Preference number: 3 (lower is better) Translates to: LSDIITIRCERHLVFSHLYHAEK*LWCLLC Trigger: GCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTA...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| 3UTR TCA 72 bp | CATCTGTATAACCTGGATGTTAAGATTACAGGTTGCTaGGCGACATTATCACCATTCGATGTGAACGACACT | + |
|
Preference number: 3 (lower is better) Translates to: HLYNLDVKITGC*ATLSPFDVNDT Trigger: AGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCTGTAATCTTAACATCCAGGTTATACAGATG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| 3UTR CCA 72 bp | CCGCAGAATAGTTCAGTAACGACCATCTGTATAACCTaGATGTTAAGATTACAGGTTGCTGAGCGACATTAT | + |
|
Preference number: 3 (lower is better) Translates to: PQNSSVTTICIT*MLRLQVAERHY Trigger: ATAATGTCGCTCAGCAACCTGTAATCTTAACATCCAGGTTATACAGATGGTCGTTACTGAACTATTCTGCGG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| 3UTR-3UTR CAA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGATTTTGTTCAAGATATaGCCATCTATCCTCCATCCA | + |
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Preference number: 3 (lower is better) Translates to: LSDIITIRCERHLVFSHLILFKI*PSILHP Trigger: TGGATGGAGGATAGATGGCAATATCTTGAACAAAAT...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCAATCCCGGGTAGGCCATaGCGAGCGGGACGAGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: STTQKSCCGAYYAQNTTSIPGRP*RAGRAE Trigger: CTCCGCTCGTCCCGCTCGTCATGGCCTACCCGGGAT...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR GCA 90 bp | AGGTTGCTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCAAAGCACAGGCGCAGGTaGAAGGAGGCGCAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLLSDIITIRCERHLVFSKHRRR*KEAQLQ Trigger: CTGCAGCTGCGCCTCCTTGCACCTGCGCCTGTGCTT...TGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR GCA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCAGAGTCGCGTCCGCAGTaGTGGGAGAAAAAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: STTQKSCCGAYYAQNTTSESRPQ*WEKKHR Trigger: CCTGTGCTTTTTCTCCCAGCACTGCGGACGCGACTC...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR CCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGTCGCGTCCGCAGTGCTaGGAGAAAAAGCACAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSDIITIRCERHLVFSHLSRPQC*EKKHRR Trigger: GCGCCTGTGCTTTTTCTCCCAGCACTGCGGACGCGA...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR CCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGAGCTGGGCCTGTTTCTaGCACTGGCTGTCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSDIITIRCERHLVFSHLSWACF*HWLSHL Trigger: CAGATGGGACAGCCAGTGCCAGAAACAGGCCCAGCT...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR CCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGGCCTGTTTCTGGCACTaGCTGTCCCATCTGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSDIITIRCERHLVFSHLACFWH*LSHLHS Trigger: GGAATGCAGATGGGACAGCCAGTGCCAGAAACAGGC...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCACCCATTTTTCCTGTGTaGTCTCTATCCAACATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STTQKSCCGAYYAQNTTSPIFPV*SLSNMA Trigger: TGCCATGTTGGATAGAGATCACACAGGAAAAATGGG...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR GCA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCACTGTGGTGCCTACTATaGTCAAAACACCACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: STTQKSCCGAYYAQNTTSLWCLL*SKHHIT Trigger: TGTGATGTGGTGTTTTGAGCATAGTAGGCACCACAG...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | AGGTTGCTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCAGTCCAGCAACAGCACTaGAGTAAGTATACACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLLSDIITIRCERHLVFSVQQQH*SKYTRS Trigger: ACTCCGTGTATACTTACTTCAGTGCTGTTGCTGGAC...TGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCAACACTAAAGATCTGGTaGTTCTACGTCGCATTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: STTQKSCCGAYYAQNTTSTLKIW*FYVAFS Trigger: CGAAAATGCGACGTAGAATCACCAGATCTTTAGTGT...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCATCACTAAGACAGACATaGGGTGTTTGCCAAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: STTQKSCCGAYYAQNTTSSLRQT*GVCQER Trigger: TCTTTCTTGGCAAACACCTCATGTCTGTCTTAGTGA...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCAAAGATTACAGGTTGCTaGGCGACATTATCACCATTC | + |
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Preference number: 4 (lower is better) Translates to: STTQKSCCGAYYAQNTTSKITGC*ATLSPF Trigger: GAATGGTGATAATGTCGCTCAGCAACCTGTAATCTT...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR CCA 90 bp | AGGTTGCTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCATGCAGAAGAGTTGCCTaGCAATTAAGTTGGATCGGC | + |
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Preference number: 4 (lower is better) Translates to: RLLSDIITIRCERHLVFSCRRVA*QLSWIG Trigger: GCCGATCCAACTTAATTGCCAGGCAACTCTTCTGCA...TGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCAGGATGCCATTTTAGGTaGACTATGTCTTCACTAATG | + |
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Preference number: 4 (lower is better) Translates to: STTQKSCCGAYYAQNTTSGCHFR*TMSSLM Trigger: CATTAGTGAAGACATAGTTCACCTAAAATGGCATCC...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | GCAACTCAAATTCAGATGATCCTCAACTCATGGGAATTCCAGGGGGATAAAGGGCACAATCGTCATATATaGAATTCGCAGACCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: ATQIQMILNSWEFQGDKGHNRHI*NSQTLV Trigger: AACAAGGGTCTGCGAATTTCATATATGACGATTGTG...CCCTTTATCCCCCTGGAATTCCCATGAGTTGAGGATCATCTGAATTTGAGTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414723.1 |
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| CDS-3UTR GCA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCAAAAGTGCAGAAGAGTTaGCTGGCAATTAAGTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: STTQKSCCGAYYAQNTTSKVQKS*LAIKLD Trigger: ATCCAACTTAATTGCCAGGCAACTCTTCTGCACTTT...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR CCA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCAGACCCTTGTTGCAAGTaGTCTCTTTTCCTAAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: STTQKSCCGAYYAQNTTSDPCCK*SLFLKK Trigger: TTTCTTTAGGAAAAGAGACCACTTGCAACAAGGGTC...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGTGCAGGTTTCCAAACTaGAGGGAGAGTAAGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LSDIITIRCERHLVFSHLCRFPN*RESKFH Trigger: ATGGAACTTACTCTCCCTTCAGTTTGGAAACCTGCA...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | AGGTTGCTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCAGTGCCACTTCCATCTTaGTCAACAGTCATGAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: RLLSDIITIRCERHLVFSVPLPS*STVMKF Trigger: AAACTTCATGACTGTTGATCAAGATGGAAGTGGCAC...TGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR GCA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCAACCACATCACATAGATaGACTCAAAATACTTACTGG | + |
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Preference number: 4 (lower is better) Translates to: STTQKSCCGAYYAQNTTSTTSHR*TQNTYW Trigger: CCAGTAAGTATTTTGAGTGCATCTATGTGATGTGGT...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR GCA 90 bp | AGGTTGCTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCAGAAAAGTTGCTGTGGTaGCTACTATGCTCAAAACAC | + |
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Preference number: 4 (lower is better) Translates to: RLLSDIITIRCERHLVFSEKLLW*LLCSKH Trigger: GTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTC...TGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGTGTGTCAAACATCTCTaGAGTTCTTCAGCATCCACT | + |
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Preference number: 4 (lower is better) Translates to: LSDIITIRCERHLVFSHLCVKHL*SSSAST Trigger: AGTGGATGCTGAAGAACTTCAGAGATGTTTGACACA...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | AACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATACCCATTTTTCCTGTGTaGTCTCTATCCAACATGGCA | + |
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Preference number: 4 (lower is better) Translates to: NQYFVMKMPSTQIRNQGIPIFPV*SLSNMA Trigger: TGCCATGTTGGATAGAGATCACACAGGAAAAATGGG...TATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000414723.1 |
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| CDS-3UTR TCA 90 bp | AATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGCAACACCAGTACTTCGTTATaGAAATGCCTTCCACGCAAA | + |
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Preference number: 4 (lower is better) Translates to: NAFHANKKPRDKTVHGCNTSTSL*KCLPRK Trigger: TTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGT...GTTGCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414723.1 |
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| CDS-3UTR TCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGTGCATTCCTGGCACCTaGATGCTAAAATTTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: LSDIITIRCERHLVFSHLCIPGT*MLKFPN Trigger: GTTTGGAAATTTTAGCATTCAGGTGCCAGGAATGCA...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR TCA 90 bp | AGGTTGCTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCATATCACCATTCGATGTaGACGACACTTAGTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: RLLSDIITIRCERHLVFSYHHSM*TTLSVF Trigger: GAAAACACTAAGTGTCGTTCACATCGAATGGTGATA...TGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR GCA 90 bp | AGGTTGCTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATGATGTTCTACTGTaGCACTTCCATCTTGATCAA | + |
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Preference number: 4 (lower is better) Translates to: RLLSDIITIRCERHLVFSHDVLL*HFHLDQ Trigger: TTGATCAAGATGGAAGTGGCACAGTAGAACATCATG...TGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR GCA 90 bp | AGGTTGCTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCAAAAGAAATCTGTCAATaGTCGAAGCTTCACACAGCA | + |
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Preference number: 4 (lower is better) Translates to: RLLSDIITIRCERHLVFSKEICQ*SKLHTA Trigger: TGCTGTGTGAAGCTTCGAGCATTGACAGATTTCTTT...TGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR GCA 90 bp | GTTCATGGATGCAACTCAAATTCAGATGATCCTCAACTCATGGGAATTCCAGGGGAACTTAGTCACTTTTaGACACAGATTCAGGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: VHGCNSNSDDPQLMGIPGELSHF*TQIQVF Trigger: AAAGACCTGAATCTGTGTGCAAAAGTGACTAAGTTC...CCCTGGAATTCCCATGAGTTGAGGATCATCTGAATTTGAGTTGCATCCATGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414723.1 |
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| CDS-3UTR CCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGGCAGAAAAGTTGCTGTaGTGCCTACTATGCTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: LSDIITIRCERHLVFSHLAEKLL*CLLCSK Trigger: TTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGC...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR CCA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCAACCATCTGTATAACCTaGATGTTAAGATTACAGGTT | + |
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Preference number: 4 (lower is better) Translates to: STTQKSCCGAYYAQNTTSTICIT*MLRLQV Trigger: AACCTGTAATCTTAACATCCAGGTTATACAGATGGT...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR GCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGCTGTTTAATGTAAAGTaGAGAAGAGTTGCCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LSDIITIRCERHLVFSHLLFNVK*RRVAWQ Trigger: TTGCCAGGCAACTCTTCTGCACTTTACATTAAACAG...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR CCA 90 bp | AGGTTGCTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCAGTTTCTAAATATGTTTaGCCATGGAAGCTCCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RLLSDIITIRCERHLVFSVSKYV*PWKLLH Trigger: ATGAAGGAGCTTCCATGGCCAAACATATTTAGAAAC...TGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
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| CDS-3UTR GCA 90 bp | TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATTTCGCAGACCCTTGTTaGAAGTGGTCTCTTTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FTAFTKPVLRYENAFHANFADPC*KWSLFL Trigger: TAGGAAAAGAGACCACTTGCAACAAGGGTCTGCGAA...ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS-3UTR CCA 90 bp | CTTGCATGGAGACTCCTATTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAATGATCCTCAACTCATaGGAATTCCAGGGGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAWRLLFTAFTKPVLRYEMILNS*EFQGDK Trigger: TTTATCCCCCTGGAATTCCCATGAGTTGAGGATCAT...TTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATAGGAGTCTCCATGCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS-3UTR CCA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGGAGAAAGGGGTTCTGTaGTCAAAAAGTTTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSDIITIRCERHLVFSHLEKGVL*SKSLEK Trigger: TTTTTCCAAACTTTTTGACCACAGAACCCCTTTCTC...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000437150.7 |
||
| CDS-3UTR TCA 90 bp | TTGCATGGAGACTCCTATTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAGTGCCACTTCCATCTTaGTCAACAGTCATGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHGDSYLLLLLNQYFVMKVPLPS*STVMKF Trigger: AAACTTCATGACTGTTGATCAAGATGGAAGTGGCAC...TTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATAGGAGTCTCCATGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS-3UTR GCA 90 bp | GGAGACTCCTATTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTCATGATGTTCTACTGTaGCACTTCCATCTTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GDSYLLLLLNQYFVMKMPHDVLL*HFHLDQ Trigger: TTGATCAAGATGGAAGTGGCACAGTAGAACATCATG...AGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATAGGAGTCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS-3UTR GCA 90 bp | CTCCTATTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACAAAGAAATCTGTCAATaGTCGAAGCTTCACACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFTAFTKPVLRYENAFHKEICQ*SKLHTA Trigger: TGCTGTGTGAAGCTTCGAGCATTGACAGATTTCTTT...GTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATAGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS-3UTR CCA 90 bp | CTATTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAGACCCTTGTTGCAAGTaGTCTCTTTTCCTAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFTAFTKPVLRYENAFHADPCCK*SLFLKK Trigger: TTTCTTTAGGAAAAGAGACCACTTGCAACAAGGGTC...TGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS-3UTR CCA 90 bp | TTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCCCAATTTCTCTTGCATaGAGACTCCTATTTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVMKMPSTQIRNQGIKLFPISLA*RLLFTA Trigger: AGCAGTAAATAGGAGTCTCCATGCAAGAGAAATTGG...GAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS-3UTR TCA 90 bp | TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATCAACTCAAATTCAGATaGTCCTCAACTCATGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FTAFTKPVLRYENAFHANQLKFR*SSTHGN Trigger: ATTCCCATGAGTTGAGGATCATCTGAATTTGAGTTG...ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| 3UTR CAA 72 bp | TTAAATCACATGCATGTTAGGAAACTCCAATTTCTCTaGCATGGAGACTCCTATTTACTGCTTTTACTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LNHMHVRKLQFL*HGDSYLLLLLN Trigger: GTTTAGTAAAAGCAGTAAATAGGAGTCTCCATGCAAGAGAAATTGGAGTTTCCTAACATGCATGTGATTTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS GCA 90 bp | AGCGGGACGAGCGGAGCGAGCGTCACCCTCGAGTCGCGTCCGCAGTaGTGGGAGAAAAAGCACAGGCGCAGGTGCAAGGAGGCGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGTSGASVTLESRPQ*WEKKHRRRCKEAQL Trigger: CAGCTGCGCCTCCTTGCACCTGCGCCTGTGCTTTTTCTCCCAGCACTGCGGACGCGACTCGAGGGTGACGCTCGCTCCGCTCGTCCCGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000437150.7 ENST00000453113.6 ENST00000481161.5 |
||
| CDS CCA 90 bp | GGGACGAGCGGAGCGAGCGTCACCCTCGAGTCGCGTCCGCAGTGCTaGGAGAAAAAGCACAGGCGCAGGTGCAAGGAGGCGCAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTSGASVTLESRPQC*EKKHRRRCKEAQLQ Trigger: CTGCAGCTGCGCCTCCTTGCACCTGCGCCTGTGCTTTTTCTCCCAGCACTGCGGACGCGACTCGAGGGTGACGCTCGCTCCGCTCGTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000437150.7 ENST00000453113.6 ENST00000481161.5 |
||
| CDS TCA 90 bp | ATAGCTTGGCAGTCAGCTTCCCTCCTCCGTATCCCGGGTAGGCCATaGCGAGCGGGACGAGCGGAGCGAGCGTCACCCTCGAGTCGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: IAWQSASLLRIPGRP*RAGRAERASPSSRV Trigger: GACGCGACTCGAGGGTGACGCTCGCTCCGCTCGTCCCGCTCGTCATGGCCTACCCGGGATACGGAGGAGGGAAGCTGACTGCCAAGCTAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453113.6 |
||
| CDS CCA 90 bp | TGCTGGCCCAGAGTATCCATCGAGGAGTATAGCTGGGCCTGTTTCTaGCACTGGCTGTCCCATCTGCATTCCTGGCACCTGAATGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: CWPRVSIEEYSWACF*HWLSHLHSWHLNAK Trigger: TTTAGCATTCAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGAAACAGGCCCAGCTATACTCCTCGATGGATACTCTGGGCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000233612.8 ENST00000429691.6 ENST00000437150.7 ENST00000446271.5 ENST00000453113.6 ENST00000473240.5 ENST00000479199.1 ENST00000481161.5 ENST00000487445.6 |
||
| CDS CCA 90 bp | TATAGCTGGGCCTGTTTCTGGCACTGGCTGTCCCATCTGCATTCCTaGCACCTGAATGCTAAAATTTCCAAACCCTCCTCCGTATCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: YSWACFWHWLSHLHS*HLNAKISKPSSVSR Trigger: CCGGGATACGGAGGAGGGTTTGGAAATTTTAGCATTCAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGAAACAGGCCCAGCTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000437150.7 ENST00000479199.1 ENST00000481161.5 ENST00000487445.6 |
||
| CDS CCA 90 bp | TATAGCTGGGCCTGTTTCTGGCACTGGCTGTCCCATCTGCATTCCTaGCACCTGAATGCTAAAATTTCCAAACTTGTTGGCCAGGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YSWACFWHWLSHLHS*HLNAKISKLVGQGP Trigger: GGGCCCCTGGCCAACAAGTTTGGAAATTTTAGCATTCAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGAAACAGGCCCAGCTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453113.6 |
||
| CDS TCA 90 bp | AAGGACTTCCTCCTGTCTTCTCCACATCTCTGCAAAGATGTCTTCTaGGCTTCATCTCTCACCTGTCCCTCGCAGTCTCACCACCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KDFLLSSPHLCKDVF*ASSLTCPSQSHHPQ Trigger: CTGAGGGTGGTGAGACTGCGAGGGACAGGTGAGAGATGAAGCTCAGAAGACATCTTTGCAGAGATGTGGAGAAGACAGGAGGAAGTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429691.6 ENST00000446271.5 ENST00000473240.5 |
||
| CDS CCA 90 bp | CCCAGAGTATCCATCGAGGAGTATAGCTGGGCCTGTTTCTGGCACTaGCTGTCCCATCTGCATTCCTGGCACCTGAATGCTAAAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRVSIEEYSWACFWH*LSHLHSWHLNAKIS Trigger: GGAAATTTTAGCATTCAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGAAACAGGCCCAGCTATACTCCTCGATGGATACTCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000233612.8 ENST00000429691.6 ENST00000437150.7 ENST00000446271.5 ENST00000453113.6 ENST00000473240.5 ENST00000479199.1 ENST00000481161.5 ENST00000487445.6 |
||
| CDS CCA 90 bp | TACATTCACCAGCCGAGGGTAACTCCCTGTTCACGTCCGGGTCTGTaGCAGTTTCTGTTCACTTCCCCTTTGGAAAGTCCCAAATCACAT | + |
|
Preference number: 5 (lower is better) Translates to: YIHQPRVTPCSRPGL*QFLFTSPLESPKSH Trigger: ATGTGATTTGGGACTTTCCAAAGGGGAAGTGAACAGAAACTGCCACAGACCCGGACGTGAACAGGGAGTTACCCTCGGCTGGTGAATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446271.5 ENST00000473240.5 |
||
| CDS CCA 90 bp | TATAGCTGGGCCTGTTTCTGGCACTGGCTGTCCCATCTGCATTCCTaGCACCTGAATGCTAAAATTTCCAAACTCCAAATTCCCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YSWACFWHWLSHLHS*HLNAKISKLQIPRE Trigger: TTCCCTGGGAATTTGGAGTTTGGAAATTTTAGCATTCAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGAAACAGGCCCAGCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429691.6 |
||
| CDS CCA 90 bp | TATAGCTGGGCCTGTTTCTGGCACTGGCTGTCCCATCTGCATTCCTaGCACCTGAATGCTAAAATTTCCAAATTTTTCGAACCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YSWACFWHWLSHLHS*HLNAKISKFFEPTS Trigger: GGAGGTGGGTTCGAAAAATTTGGAAATTTTAGCATTCAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGAAACAGGCCCAGCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446271.5 |
||
| CDS CCA 90 bp | TATAGCTGGGCCTGTTTCTGGCACTGGCTGTCCCATCTGCATTCCTaGCACCTGAATGCTAAAATTTCCAAAAAGCTGGGATCTAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: YSWACFWHWLSHLHS*HLNAKISKKLGSRK Trigger: TTTCCTAGATCCCAGCTTTTTGGAAATTTTAGCATTCAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGAAACAGGCCCAGCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000473240.5 |
||
| CDS-3UTR CAA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCAATTCGCAGACCCTTGTaGCAAGTGGTCTCTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STTQKSCCGAYYAQNTTSIRRPL*QVVSFP Trigger: AGGAAAAGAGACCACTTGCAACAAGGGTCTGCGAAT...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000437150.7 |
||
| CDS CCA 90 bp | TTTTTCGAACCCACCTCCAAATTCCCAGGGAAACAAGTTAGTGTTTaGGAACCCACAGGAGGTCAGGTTTATTTTAGGAAGGACTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FFEPTSKFPGKQVSV*EPTGGQVYFRKDFL Trigger: GAGGAAGTCCTTCCTAAAATAAACCTGACCTCCTGTGGGTTCCCAAACACTAACTTGTTTCCCTGGGAATTTGGAGGTGGGTTCGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446271.5 |
||
| CDS CCA 90 bp | GATCTAGGAAACTTTAAGTCTTGGCTTCCTTCTAAGCTGAGTTGGTaGTTCAAGTCCATCCACATCTGTTACCAGGTCCTGGTCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DLGNFKSWLPSKLSW*FKSIHICYQVLVKA Trigger: AGCTTTGACCAGGACCTGGTAACAGATGTGGATGGACTTGAACCACCAACTCAGCTTAGAAGGAAGCCAAGACTTAAAGTTTCCTAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473240.5 |
||
| CDS CCA 90 bp | TGGGATCTAGGAAACTTTAAGTCTTGGCTTCCTTCTAAGCTGAGTTaGTGGTTCAAGTCCATCCACATCTGTTACCAGGTCCTGGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: WDLGNFKSWLPSKLS*WFKSIHICYQVLVK Trigger: TTTGACCAGGACCTGGTAACAGATGTGGATGGACTTGAACCACCAACTCAGCTTAGAAGGAAGCCAAGACTTAAAGTTTCCTAGATCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473240.5 |
||
| CDS-3UTR CAA 90 bp | GCAACTCAAATTCAGATGATCCTCAACTCATGGGAATTCCAGGGGGATAAAGGGTGTGCCACTTCCATCTaGATCAACAGTCATGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ATQIQMILNSWEFQGDKGCATSI*INSHEV Trigger: AACTTCATGACTGTTGATCAAGATGGAAGTGGCACA...CCCTTTATCCCCCTGGAATTCCCATGAGTTGAGGATCATCTGAATTTGAGTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS-3UTR CAA 90 bp | AGTACCACGCAGAAAAGTTGCTGTGGTGCCTACTATGCTCAAAACACCACATCATGCCTGGCAATTAAGTaGGATCGGCATAGAATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: STTQKSCCGAYYAQNTTSCLAIK*DRHRML Trigger: TAACATTCTATGCCGATCCAACTTAATTGCCAGGCA...TGATGTGGTGTTTTGAGCATAGTAGGCACCACAGCAACTTTTCTGCGTGGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
||
| CDS CCA 90 bp | CCTCCACAATCGTCATATATGAAATTCGCAGACCCTTGTTGCAAGTaGTCTCTTTTCCTAAAGAAATCTGTCAATGCTCGAAGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: PPQSSYMKFADPCCK*SLFLKKSVNARSFT Trigger: TGTGAAGCTTCGAGCATTGACAGATTTCTTTAGGAAAAGAGACCACTTGCAACAAGGGTCTGCGAATTTCATATATGACGATTGTGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS CCA 90 bp | AAACTGTTCATGGATGCAACTCAAATTCAGATGATCCTCAACTCATaGGAATTCCAGGGGGATAAAGGGAACTTAGTCACTTTTGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: KLFMDATQIQMILNS*EFQGDKGNLVTFAH Trigger: GTGTGCAAAAGTGACTAAGTTCCCTTTATCCCCCTGGAATTCCCATGAGTTGAGGATCATCTGAATTTGAGTTGCATCCATGAACAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS CCA 90 bp | CTAAAATTTCCAAACTCCAAATTCCCAGGGAAACAAGTTAGTGTTTaGGAACCCACAGGAGGTCAGGTTTATTTTAGGAAGGACTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LKFPNSKFPGKQVSV*EPTGGQVYFRKDFL Trigger: GAGGAAGTCCTTCCTAAAATAAACCTGACCTCCTGTGGGTTCCCAAACACTAACTTGTTTCCCTGGGAATTTGGAGTTTGGAAATTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429691.6 |
||
| CDS-3UTR CAA 90 bp | AGGTTGCTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCATGTGCCACTTCCATCTaGATCAACAGTCATGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RLLSDIITIRCERHLVFSCATSI*INSHEV Trigger: AACTTCATGACTGTTGATCAAGATGGAAGTGGCACA...TGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
||
| CDS-3UTR CAA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGGAAATTCGCAGACCCTaGTTGCAAGTGGTCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSDIITIRCERHLVFSHLEIRRP*LQVVSF Trigger: AAAAGAGACCACTTGCAACAAGGGTCTGCGAATTTC...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
||
| CDS-3UTR CAA 90 bp | CTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCACATTTGGCTGCCCATAGCTCTTaGAATGCATTAAATCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LSDIITIRCERHLVFSHLAAHSS*NALNPI Trigger: AATGGGATTTAATGCATTCAAAGAGCTATGGGCAGC...CAAATGTGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
||
| CDS-3UTR CAA 90 bp | AACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATACATAAGACCAATGGCTaGACGCAACTCATGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NQYFVMKMPSTQIRNQGIHKTNG*TQLMMF Trigger: GAACATCATGAGTTGCGTCAAGCCATTGGTCTTATG...TATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS-3UTR CAA 90 bp | CTCCTATTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACATTCGCAGACCCTTGTaGCAAGTGGTCTCTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLFTAFTKPVLRYENAFHIRRPL*QVVSFP Trigger: AGGAAAAGAGACCACTTGCAACAAGGGTCTGCGAAT...GTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS-3UTR CAA 90 bp | ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGAAATTCGCAGACCCTaGTTGCAAGTGGTCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: MKMPSTQIRNQGIKLFMDEIRRP*LQVVSF Trigger: AAAAGAGACCACTTGCAACAAGGGTCTGCGAATTTC...ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS-3UTR CAA 90 bp | AGGTTGCTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCAACAGACATGAGGTGTTaGCCAAGAAAGAAATTACAT | + |
|
Preference number: 5 (lower is better) Translates to: RLLSDIITIRCERHLVFSTDMRC*PRKKLH Trigger: ATGTAATTTCTTTCTTGGCAAACACCTCATGTCTGT...TGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437150.7 |
||
| CDS-3UTR CAA 90 bp | AGGTTGCTGAGCGACATTATCACCATTCGATGTGAACGACACTTAGTGTTTTCAATTTTGTTCAAGATATaGCCATCTATCCTCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLLSDIITIRCERHLVFSILFKI*PSILHP Trigger: TGGATGGAGGATAGATGGCAATATCTTGAACAAAAT...TGAAAACACTAAGTGTCGTTCACATCGAATGGTGATAATGTCGCTCAGCAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437150.7 |
||
| CDS-3UTR CAA 90 bp | ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGCTGCCCATAGCTCTTaGAATGCATTAAATCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: MKMPSTQIRNQGIKLFMDAAHSS*NALNPI Trigger: AATGGGATTTAATGCATTCAAAGAGCTATGGGCAGC...ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS-3UTR CAA 90 bp | AACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTCCAATTTCTCTaGCATGGAGACTCCTATTTA | + |
|
Preference number: 5 (lower is better) Translates to: NQYFVMKMPSTQIRNQGIKLQFL*HGDSYL Trigger: TAAATAGGAGTCTCCATGCAAGAGAAATTGGAGTTT...TATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414723.1 |
||
| CDS TCA 72 bp | CAGTCAGCTTCCCTCCTCCGTATCCCGGGTAGGCCATaGCGAGCGGGACGAGCGGAGCGAGCGTCACCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QSASLLRIPGRP*RAGRAERASPS Trigger: CGAGGGTGACGCTCGCTCCGCTCGTCCCGCTCGTCATGGCCTACCCGGGATACGGAGGAGGGAAGCTGACTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453113.6 |
||
| CDS CCA 72 bp | GGAGCGAGCGTCACCCTCGAGTCGCGTCCGCAGTGCTaGGAGAAAAAGCACAGGCGCAGGTGCAAGGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GASVTLESRPQC*EKKHRRRCKEA Trigger: CGCCTCCTTGCACCTGCGCCTGTGCTTTTTCTCCCAGCACTGCGGACGCGACTCGAGGGTGACGCTCGCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000437150.7 ENST00000453113.6 ENST00000481161.5 ENST00000487445.6 |
||
| CDS GCA 72 bp | AGCGGAGCGAGCGTCACCCTCGAGTCGCGTCCGCAGTaGTGGGAGAAAAAGCACAGGCGCAGGTGCAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGASVTLESRPQ*WEKKHRRRCKE Trigger: CTCCTTGCACCTGCGCCTGTGCTTTTTCTCCCAGCACTGCGGACGCGACTCGAGGGTGACGCTCGCTCCGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000437150.7 ENST00000453113.6 ENST00000481161.5 ENST00000487445.6 |
||
| CDS TCA 72 bp | AATTTCCAAACCCTCCTCCGTATCCCGGGTAGGCCATaGCGAGCGGGACGAGCGGAGCGAGCGTCACCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: NFQTLLRIPGRP*RAGRAERASPS Trigger: CGAGGGTGACGCTCGCTCCGCTCGTCCCGCTCGTCATGGCCTACCCGGGATACGGAGGAGGGTTTGGAAATT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000437150.7 ENST00000479199.1 ENST00000481161.5 ENST00000487445.6 |
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| CDS CCA 72 bp | CAGCCGAGGGTAACTCCCTGTTCACGTCCGGGTCTGTaGCAGTTTCTGTTCACTTCCCCTTTGGAAAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: QPRVTPCSRPGL*QFLFTSPLESP Trigger: GGGACTTTCCAAAGGGGAAGTGAACAGAAACTGCCACAGACCCGGACGTGAACAGGGAGTTACCCTCGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446271.5 ENST00000473240.5 |
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| CDS CCA 72 bp | TCCATCGAGGAGTATAGCTGGGCCTGTTTCTGGCACTaGCTGTCCCATCTGCATTCCTGGCACCTGAATGCT | + |
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Preference number: 6 (lower is better) Translates to: SIEEYSWACFWH*LSHLHSWHLNA Trigger: AGCATTCAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGAAACAGGCCCAGCTATACTCCTCGATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000233612.8 ENST00000429691.6 ENST00000437150.7 ENST00000446271.5 ENST00000453113.6 ENST00000473240.5 ENST00000479199.1 ENST00000481161.5 ENST00000487445.6 |
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| CDS CCA 72 bp | AGAGTATCCATCGAGGAGTATAGCTGGGCCTGTTTCTaGCACTGGCTGTCCCATCTGCATTCCTGGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: RVSIEEYSWACF*HWLSHLHSWHL Trigger: CAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGAAACAGGCCCAGCTATACTCCTCGATGGATACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000233612.8 ENST00000429691.6 ENST00000437150.7 ENST00000446271.5 ENST00000453113.6 ENST00000473240.5 ENST00000479199.1 ENST00000481161.5 ENST00000487445.6 |
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| CDS CCA 72 bp | GGCCCTTTCACATGGCTCTTCCACTTTTTCATAGCTTaGCAGTCAGCTTCCCTCCTCCGTATCCCGGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: GPFTWLFHFFIA*QSASLLRIPGR Trigger: CCTACCCGGGATACGGAGGAGGGAAGCTGACTGCCAAGCTATGAAAAAGTGGAAGAGCCATGTGAAAGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453113.6 |
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| CDS TCA 72 bp | TCTGGCACTGGCTGTCCCATCTGCATTCCTGGCACCTaGATGCTAAAATTTCCAAACTTGTTGGCCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: SGTGCPICIPGT*MLKFPNLLARG Trigger: GCCCCTGGCCAACAAGTTTGGAAATTTTAGCATTCAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453113.6 |
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| CDS TCA 72 bp | CTCCTGTCTTCTCCACATCTCTGCAAAGATGTCTTCTaGGCTTCATCTCTCACCTGTCCCTCGCAGTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: LLSSPHLCKDVF*ASSLTCPSQSH Trigger: GTGAGACTGCGAGGGACAGGTGAGAGATGAAGCTCAGAAGACATCTTTGCAGAGATGTGGAGAAGACAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429691.6 ENST00000446271.5 ENST00000473240.5 |
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| CDS CAA 72 bp | CGTCCGGGTCTGTGGCAGTTTCTGTTCACTTCCCCTTaGGAAAGTCCCAAATCACATGCTTTTATGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RPGLWQFLFTSP*ESPKSHAFMPC Trigger: GCAGGGCATAAAAGCATGTGATTTGGGACTTTCCAAAGGGGAAGTGAACAGAAACTGCCACAGACCCGGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000446271.5 ENST00000473240.5 |
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| CDS TCA 72 bp | TCTGGCACTGGCTGTCCCATCTGCATTCCTGGCACCTaGATGCTAAAATTTCCAAAATTACTCCCTCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SGTGCPICIPGT*MLKFPKLLPRL Trigger: GAGCCGAGGGAGTAATTTTGGAAATTTTAGCATTCAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233612.8 |
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| CDS TCA 72 bp | CAGCATCCACTTCACCATCCTGTCCAGCAACAGCACTaGAGTAAGTATACACGGAGTCACCAGCTGAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: QHPLHHPVQQQH*SKYTRSHQLRN Trigger: ATTCCTCAGCTGGTGACTCCGTGTATACTTACTTCAGTGCTGTTGCTGGACAGGATGGTGAAGTGGATGCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000233612.8 ENST00000429691.6 ENST00000437150.7 ENST00000446271.5 ENST00000453113.6 ENST00000473240.5 ENST00000479199.1 ENST00000481161.5 ENST00000487445.6 |
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| CDS CAA 72 bp | ACCTGCTGGGAAAACAAAATATCCGCCGGAGGAGCTTaGCTAGAGCGTTGGTCTTGGTGTCAGAGAGAATTC | + |
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Preference number: 6 (lower is better) Translates to: TCWENKISAGGA*LERWSWCQREF Trigger: GAATTCTCTCTGACACCAAGACCAACGCTCTAGCAAAGCTCCTCCGGCGGATATTTTGTTTTCCCAGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473240.5 |
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| CDS TCA 72 bp | TCTGGCACTGGCTGTCCCATCTGCATTCCTGGCACCTaGATGCTAAAATTTCCAAAAAGCTGGGATCTAGGA | + |
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Preference number: 6 (lower is better) Translates to: SGTGCPICIPGT*MLKFPKSWDLG Trigger: TCCTAGATCCCAGCTTTTTGGAAATTTTAGCATTCAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000473240.5 |
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| CDS TCA 72 bp | TCTGGCACTGGCTGTCCCATCTGCATTCCTGGCACCTaGATGCTAAAATTTCCAAATTTTTCGAACCCACCT | + |
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Preference number: 6 (lower is better) Translates to: SGTGCPICIPGT*MLKFPNFSNPP Trigger: AGGTGGGTTCGAAAAATTTGGAAATTTTAGCATTCAGGTGCCAGGAATGCAGATGGGACAGCCAGTGCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446271.5 |
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| CDS CAA 72 bp | TTGAGGACTCAACCTATAACCCATAAGACCAATGGCTaGACGCAACTCATGATGTTCTACTGTGCCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: LRTQPITHKTNG*TQLMMFYCATS Trigger: GGAAGTGGCACAGTAGAACATCATGAGTTGCGTCAAGCCATTGGTCTTATGGGTTATAGGTTGAGTCCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000233612.8 ENST00000414723.1 ENST00000437150.7 ENST00000487445.6 |
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| CDS CAA 90 bp | AATGGCTTGACGCAACTCATGATGTTCTACTGTGCCACTTCCATCTaGATCAACAGTCATGAAGTTTTCCTTCCAGGCATTAAGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: NGLTQLMMFYCATSI*INSHEVFLPGIKSC Trigger: GCAGCTCTTAATGCCTGGAAGGAAAACTTCATGACTGTTGATCAAGATGGAAGTGGCACAGTAGAACATCATGAGTTGCGTCAAGCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000233612.8 ENST00000414723.1 ENST00000437150.7 ENST00000453113.6 ENST00000479199.1 ENST00000487445.6 |
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| CDS GCA 72 bp | GTCCATCCACATCTGTTACCAGGTCCTGGTCAAAGCTaGATAAATACCAGCAATAGGAGGTCAGGTTTATTT | + |
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Preference number: 6 (lower is better) Translates to: VHPHLLPGPGQS*INTSNRRSGLF Trigger: AAATAAACCTGACCTCCTATTGCTGGTATTTATGCAGCTTTGACCAGGACCTGGTAACAGATGTGGATGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473240.5 |
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| CDS CCA 72 bp | ATGGATGCAACTCAAATTCAGATGATCCTCAACTCATaGGAATTCCAGGGGGATAAAGGGAACTTAGTCACT | + |
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Preference number: 6 (lower is better) Translates to: MDATQIQMILNS*EFQGDKGNLVT Trigger: AGTGACTAAGTTCCCTTTATCCCCCTGGAATTCCCATGAGTTGAGGATCATCTGAATTTGAGTTGCATCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414723.1 |
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| CDS GCA 72 bp | CCTTTGGAAAGTCCCAAATCACATGCTTTTATGCCCTaGACATTTTGGCCTACAAAGGACCTTATTGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: PLESPKSHAFMP*TFWPTKDLIVK Trigger: CTTAACAATAAGGTCCTTTGTAGGCCAAAATGTGCAGGGCATAAAAGCATGTGATTTGGGACTTTCCAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000446271.5 ENST00000473240.5 |
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| CDS CAA 72 bp | AAGAATGTTAATGTTCTTACCCATAAGACCAATGGCTaGACGCAACTCATGATGTTCTACTGTGCCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: KNVNVLTHKTNG*TQLMMFYCATS Trigger: GGAAGTGGCACAGTAGAACATCATGAGTTGCGTCAAGCCATTGGTCTTATGGGTAAGAACATTAACATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479199.1 |
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| CDS CAA 90 bp | TACGTTCATTCCTCCACAATCGTCATATATGAAATTCGCAGACCCTaGTTGCAAGTGGTCTCTTTTCCTAAAGAAATCTGTCAATGCTCG | + |
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Preference number: 6 (lower is better) Translates to: YVHSSTIVIYEIRRP*LQVVSFPKEICQCS Trigger: CGAGCATTGACAGATTTCTTTAGGAAAAGAGACCACTTGCAACAAGGGTCTGCGAATTTCATATATGACGATTGTGGAGGAATGAACGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414723.1 |
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| CDS CAA 72 bp | TCCTCCACAATCGTCATATATGAAATTCGCAGACCCTaGTTGCAAGTGGTCTCTTTTCCTAAAGAAATCTGT | + |
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Preference number: 6 (lower is better) Translates to: SSTIVIYEIRRP*LQVVSFPKEIC Trigger: ACAGATTTCTTTAGGAAAAGAGACCACTTGCAACAAGGGTCTGCGAATTTCATATATGACGATTGTGGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414723.1 |
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| CDS CCA 72 bp | TCGTCATATATGAAATTCGCAGACCCTTGTTGCAAGTaGTCTCTTTTCCTAAAGAAATCTTTAAACAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSYMKFADPCCK*SLFLKKSLNKE Trigger: TTCTTTGTTTAAAGATTTCTTTAGGAAAAGAGACCACTTGCAACAAGGGTCTGCGAATTTCATATATGACGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487445.6 |
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