RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GC (Homo sapiens)

Ensembl gene IDs: ENSG00000145321

Ensembl transcript IDs: ENST00000273951.13, ENST00000503472.5, ENST00000504199.5, ENST00000505234.1, ENST00000506245.1, ENST00000509740.5, ENST00000513476.5

Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp GGAGGTGAGTTTATGGAACAGCAGTTGGAGGCAAAGTCTGAGTGCTaGTTAACCAGCTTTGCCAGTTCCGTGGGTGTGGCATCAGGCAAT +
Preference number: 2 (lower is better)
Translates to: GGEFMEQQLEAKSEC*LTSFASSVGVASGN
Trigger: ATTGCCTGATGCCACACCCACGGAACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAACTGCTGTTCCATAAACTCACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
3UTR-3UTR CCA 90 bp CTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCCAGAGATCATTCCCCTaGGTGGCTCCAACTCTGGTC +
Preference number: 2 (lower is better)
Translates to: LPRSSVVLLRLGHQRSFPQRSFP*VAPTLV
Trigger: GACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTG...GGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
3UTR-3UTR GCA 90 bp CTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCCTTGTTAACCAGCTTTaGCAGTTCCGTGGGTGTGGC +
Preference number: 2 (lower is better)
Translates to: LPRSSVVLLRLGHQRSFPLVNQL*QFRGCG
Trigger: GCCACACCCACGGAACTGGCAAAGCTGGTTAACAAG...GGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509740.5
3UTR-3UTR CCA 90 bp GTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACGATCATTCCCCTGGGTaGCTCCAACTCTGGTCAAAG +
Preference number: 2 (lower is better)
Translates to: VIRDHSPGWLQLWSKLINDHSPG*LQLWSK
Trigger: CTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATC...GTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
3UTR-3UTR CCA 90 bp TTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATCCAGTTCCGTGGGTGTaGCATCAGGCAATTTTGCTT +
Preference number: 2 (lower is better)
Translates to: LGHQRSFPWVAPTLVKVNPVPWV*HQAILL
Trigger: AAGCAAAATTGCCTGATGCCACACCCACGGAACTGG...ATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509740.5
3UTR-3UTR GCA 90 bp CAGCATCAATCTCTGAATCACAGTAAAGAGGAGGTGAGTTTATGGAACAGCAGTGAGGCAAAGTCTGAGTaGTTGTTAACCAGCTTTGCC +
Preference number: 2 (lower is better)
Translates to: QHQSLNHSKEEVSLWNSSEAKSE*LLTSFA
Trigger: GGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTC...ACTGCTGTTCCATAAACTCACCTCCTCTTTACTGTGATTCAGAGATTGATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
3UTR-3UTR TCA 90 bp GTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAGGACTACAGGATATTCTTGTCCCTTGTCAATaGAAGAAGATAGTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: VAPTLVKVNKHASGLQDILVPCQ*KKIVPS
Trigger: AGAAGGAACTATCTTCTTTCATTGACAAGGGACAAG...AATATCCTGTAGTCCTGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
3UTR-3UTR CAA 90 bp CTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCAGAAGCTCAGTGGTTTaGCTTAGGTTAGGTCATCAG +
Preference number: 3 (lower is better)
Translates to: LPRSSVVLLRLGHQRSFPRSSVV*LRLGHQ
Trigger: CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT...GGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
3UTR-3UTR CAA 90 bp GTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACTGGCATCAGGCAATTTaGCTTTTAGTCGCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: VIRDHSPGWLQLWSKLINWHQAI*LLVALP
Trigger: TGGCAGAGCGACTAAAAGCAAAATTGCCTGATGCCA...GTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509740.5
3UTR-3UTR CAA 90 bp GTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACGCAAAGTCTGAGTGCTaGTTAACCAGCTTTGCCAGT +
Preference number: 3 (lower is better)
Translates to: VIRDHSPGWLQLWSKLINAKSEC*LTSFAS
Trigger: ACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGC...GTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509740.5
3UTR CCA 72 bp CAATCTCTGAATCACAGTAAAGAGGAGGTGAGTTTATaGAACAGCAGTTGGAGGCAAAGTCTGAGTGCTTGT +
Preference number: 3 (lower is better)
Translates to: QSLNHSKEEVSL*NSSWRQSLSAC
Trigger: ACAAGCACTCAGACTTTGCCTCCAACTGCTGTTCCATAAACTCACCTCCTCTTTACTGTGATTCAGAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
3UTR CCA 72 bp GTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTaGGTGGCTCCAACTCTGGTCAAAGTTAATAAACAT +
Preference number: 3 (lower is better)
Translates to: VLLRLGHQRSFP*VAPTLVKVNKH
Trigger: ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
3UTR-3UTR CAA 90 bp TTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATCATAGTTCTTGTCCCTaGTCAATGAAAGAAGATAGT +
Preference number: 3 (lower is better)
Translates to: LGHQRSFPWVAPTLVKVNHSSCP*SMKEDS
Trigger: ACTATCTTCTTTCATTGACAAGGGACAAGAACTATG...ATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR GCA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGCCAGGCCCTCTTTGGTaGAGCACTCAGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVPGPLW*STQQCL
Trigger: CAGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGG...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGTGCAGCACTCAGCAGTaGCTGGGTGAACGGGGAATG +
Preference number: 4 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVCSTQQ*LGERGM
Trigger: CATTCCCCGTTCACCCAGGCACTGCTGAGTGCTGCA...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp GTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACCCAGGCCCTCTTTGGTaGAGCACTCAGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VIRDHSPGWLQLWSKLINPGPLW*STQQCL
Trigger: CAGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGG...GTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp TTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATCCAGGCCCTCTTTGGTaGAGCACTCAGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGHQRSFPWVAPTLVKVNPGPLW*STQQCL
Trigger: CAGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGG...ATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp GAACAGCAGTTGGAGGCAAAGTCTGAGTGCTTGTTAACCAGCTTTGCCAGTTCCGGGGAGTTGGGCAGCTaGCATGAAGTAAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: EQQLEAKSECLLTSFASSGELGS*HEVSAH
Trigger: GTGTGCACTTACTTCATGCCAGCTGCCCAACTCCCC...GGAACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAACTGCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGGGGCAACTCTACATCTaGAAGCTCGGGGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVGQLYI*KLGELG
Trigger: GCCCAACTCCCCGAGCTTCCAGATGTAGAGTTGCCC...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp TTGGAGGCAAAGTCTGAGTGCTTGTTAACCAGCTTTGCCAGTTCCGTGGGTGTGGCTTTGCCAGTTCCGTaGGTGTGGCATCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: LEAKSECLLTSFASSVGVALPVP*VWHQAI
Trigger: AATTGCCTGATGCCACACCCACGGAACTGGCAAAGC...CACACCCACGGAACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR CCA 90 bp TTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATGTTCCAGGCCCTCTTTaGTGCAGCACTCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LGHQRSFPWVAPTLVKVNVPGPL*CSTQQC
Trigger: GCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAAC...ATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGAGGGCAACTCTACATCTaGAAGCTCGGGGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRGQLYI*KLGELG
Trigger: GCCCAACTCCCCGAGCTTCCAGATGTAGAGTTGCCC...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGCAGAGATCATTCCCCTaGGTGGCTCCAACTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVQRSFP*VAPTLV
Trigger: GACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTG...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGCCTTCACAAGTTGGCTaGCCTGTTCAAACGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVPSQVG*PVQTCH
Trigger: GTGGCACGTTTGAACAGGTCAGCCAACTTGTGAAGG...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp TTGGAGGCAAAGTCTGAGTGCTTGTTAACCAGCTTTGCCAGTTCCGTGGGTGTGAGAGGGCCTTATCCATaGCTTTGGTGTTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LEAKSECLLTSFASSVGVRGPYP*LWCFLD
Trigger: ATCCAGGAAACACCAAAGTCATGGATAAGGCCCTCT...CACACCCACGGAACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR GCA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGTCTACCAGAGAGTCTTaGAGCACCTCCTCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVSTRES*STSSLL
Trigger: CAGGAGAGAGGAGGTGCTGCAAGACTCTCTGGTAGA...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273951.13
ENST00000509740.5
CDS-3UTR GCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCCAGGCCCTCTTTGGTaGAGCACTCAGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGPGPLW*STQQCL
Trigger: CAGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGG...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR GCA 90 bp GTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACGCATACAGTTGGGCTTaGAGAGGTACAGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: VIRDHSPGWLQLWSKLINAYSWA*RGTAGP
Trigger: GGGTCCTGCTGTACCTCTGCAAGCCCAACTGTATGC...GTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGAGCATACAGTTGGGCTTaGAGAGGTACAGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRAYSWA*RGTAGP
Trigger: GGGTCCTGCTGTACCTCTGCAAGCCCAACTGTATGC...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGCTTGTTAACCAGCTTTaGCAGTTCCGTGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVLVNQL*QFRGCG
Trigger: GCCACACCCACGGAACTGGCAAAGCTGGTTAACAAG...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp CTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCACAGTGCTGAGGTCCTaGTGTCATAGCAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LPRSSVVLLRLGHQRSFPTVLRS*CHSSQG
Trigger: ACCCTGACTGCTATGACACCAGGACCTCAGCACTGT...GGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAGTTCCAGGCCCTCTTTaGTGCAGCACTCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RSFPWVAPTLVKVNKHASVPGPL*CSTQQC
Trigger: GCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAAC...TGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp CATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGTTCCAGGCCCTCTTTaGTGCAGCACTCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: HQRSFPWVAPTLVKVNKHVPGPL*CSTQQC
Trigger: GCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAAC...ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp CATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGGGCAACTCTACATCTaGAAGCTCGGGGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: HQRSFPWVAPTLVKVNKHGQLYI*KLGELG
Trigger: GCCCAACTCCCCGAGCTTCCAGATGTAGAGTTGCCC...ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
3UTR CAA 72 bp TTTATGGAACAGCAGTTGGAGGCAAAGTCTGAGTGCTaGTTAACCAGCTTTGCCAGTTCCGTGGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: FMEQQLEAKSEC*LTSFASSVGVA
Trigger: TGCCACACCCACGGAACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAACTGCTGTTCCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR TCA 90 bp GTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACCCTTCACAAGTTGGCTaGCCTGTTCAAACGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VIRDHSPGWLQLWSKLINPSQVG*PVQTCH
Trigger: GTGGCACGTTTGAACAGGTCAGCCAACTTGTGAAGG...GTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp TTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATTCAGCAGTGCCTGGGTaGACGGGGAATGGAGAATTA +
Preference number: 4 (lower is better)
Translates to: LGHQRSFPWVAPTLVKVNSAVPG*TGNGEL
Trigger: TAATTCTCCATTCCCCGTTCACCCAGGCACTGCTGA...ATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTTGCAGCACTCAGCAGTaGCTGGGTGAACGGGGAATG +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGCSTQQ*LGERGM
Trigger: CATTCCCCGTTCACCCAGGCACTGCTGAGTGCTGCA...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR GCA 90 bp CAGCATCAATCTCTGAATCACAGTAAAGAGGAGGTGAGTTTATGGAACAGCAGTTGCAGCACTCAGCAGTaGCTGGGTGAACGGGGAATG +
Preference number: 4 (lower is better)
Translates to: QHQSLNHSKEEVSLWNSSCSTQQ*LGERGM
Trigger: CATTCCCCGTTCACCCAGGCACTGCTGAGTGCTGCA...ACTGCTGTTCCATAAACTCACCTCCTCTTTACTGTGATTCAGAGATTGATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR GCA 90 bp CTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCGCAGCTCTTTGGCCATaGAATCTTCAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LPRSSVVLLRLGHQRSFPAALWP*NLQRQT
Trigger: AGTCTGCCTCTGAAGATTGCATGGCCAAAGAGCTGC...GGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGACTTGTTAACCAGCTTTaGCAGTTCCGTGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRLVNQL*QFRGCG
Trigger: GCCACACCCACGGAACTGGCAAAGCTGGTTAACAAG...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp CTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGAGGCAAAGTCTGAGTaGTTGTTAACCAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LRLGHQRSFPWVAPTLVKEAKSE*LLTSFA
Trigger: GGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTC...TTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAACCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp CTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAATCCTCCTTTCCCAGATaGGAGAATTCCTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: LRLGHQRSFPWVAPTLVKSSFPR*ENSLQT
Trigger: AGTCTGCAAGGAATTCTCCCATCTGGGAAAGGAGGA...TTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAACCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGTTCCAGGCCCTCTTTaGTGCAGCACTCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGVPGPL*CSTQQC
Trigger: GCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAAC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp GTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACGGGAATTCCTGTGGCTaGTGTTTCAGAGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: VIRDHSPGWLQLWSKLINGNSCG*CFRAAM
Trigger: CATGGCTGCTCTGAAACACCAGCCACAGGAATTCCC...GTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp TTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATGGTAGGGAATTCCTGTaGCTGGTGTTTCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGHQRSFPWVAPTLVKVNGREFL*LVFQSS
Trigger: GCTGCTCTGAAACACCAGCCACAGGAATTCCCTACC...ATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp TGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCGGGGAGTTGGGCAGCTaGCATGAAGTAAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: CLPRSSVVLLRLGHQRSFGELGS*HEVSAH
Trigger: GTGTGCACTTACTTCATGCCAGCTGCCCAACTCCCC...GAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGGGCAACTCTACATCTaGAAGCTCGGGGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGGQLYI*KLGELG
Trigger: GCCCAACTCCCCGAGCTTCCAGATGTAGAGTTGCCC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGAGCTTTGCCAGTTCCGTaGGTGTGGCATCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRALPVP*VWHQAI
Trigger: AATTGCCTGATGCCACACCCACGGAACTGGCAAAGC...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGAGATCATTCCCCTGGGTaGCTCCAACTCTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRDHSPG*LQLWSK
Trigger: CTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATC...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp CATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATTCAGCAGTGCCTGGGTaGACGGGGAATGGAGAATTA +
Preference number: 4 (lower is better)
Translates to: HQRSFPWVAPTLVKVNKHSAVPG*TGNGEL
Trigger: TAATTCTCCATTCCCCGTTCACCCAGGCACTGCTGA...ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATGCATACAGTTGGGCTTaGAGAGGTACAGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHAYSWA*RGTAGP
Trigger: GGGTCCTGCTGTACCTCTGCAAGCCCAACTGTATGC...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGCATACAGTTGGGCTTaGAGAGGTACAGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGAYSWA*RGTAGP
Trigger: GGGTCCTGCTGTACCTCTGCAAGCCCAACTGTATGC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR GCA 90 bp TTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATGCAGCTCTTTGGCCATaGAATCTTCAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LGHQRSFPWVAPTLVKVNAALWP*NLQRQT
Trigger: AGTCTGCCTCTGAAGATTGCATGGCCAAAGAGCTGC...ATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGAGCAGCTCTTTGGCCATaGAATCTTCAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRAALWP*NLQRQT
Trigger: AGTCTGCCTCTGAAGATTGCATGGCCAAAGAGCTGC...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp CATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATTCTACCAGAGAGTCTTaGAGCACCTCCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HQRSFPWVAPTLVKVNKHSTRES*STSSLL
Trigger: GAGGAGAGAGGAGGTGCTGCAAGACTCTCTGGTAGA...ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504199.5
CDS-3UTR CCA 90 bp TATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGACAGTGCTGAGGTCCTaGTGTCATAGCAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: YPSCLPRSSVVLLRLGHQTVLRS*CHSSQG
Trigger: ACCCTGACTGCTATGACACCAGGACCTCAGCACTGT...CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp GAACAGCAGTTGGAGGCAAAGTCTGAGTGCTTGTTAACCAGCTTTGCCAGTTCCTGGGTGAACGGGGAATaGAGAATTACTTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: EQQLEAKSECLLTSFASSWVNGE*RITFTG
Trigger: TCCTGTGAAAGTAATTCTCCATTCCCCGTTCACCCA...GGAACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAACTGCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR CCA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGAGTTCAGGCAGCTCTTTaGCCATGCAATCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRVQAAL*PCNLQR
Trigger: CCTCTGAAGATTGCATGGCCAAAGAGCTGCCTGAAC...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGGGGAGTTGGGCAGCTaGCATGAAGTAAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGGELGS*HEVSAH
Trigger: GTGTGCACTTACTTCATGCCAGCTGCCCAACTCCCC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGACCAGTTCCGTGGGTGTaGCATCAGGCAATTTTGCTT +
Preference number: 4 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRPVPWV*HQAILL
Trigger: AAGCAAAATTGCCTGATGCCACACCCACGGAACTGG...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAGCTTTGCCAGTTCCGTaGGTGTGGCATCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: RSFPWVAPTLVKVNKHASALPVP*VWHQAI
Trigger: AATTGCCTGATGCCACACCCACGGAACTGGCAAAGC...TGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp GAACAGCAGTTGGAGGCAAAGTCTGAGTGCTTGTTAACCAGCTTTGCCAGTTCCTTATGGAACAGCAGTTaGAGGCAAAGTCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: EQQLEAKSECLLTSFASSLWNSS*RQSLSA
Trigger: AGCACTCAGACTTTGCCTCCAACTGCTGTTCCATAA...GGAACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAACTGCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGGAGGAGGTGAGTTTATaGAACAGCAGTTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVEEVSL*NSSWRQ
Trigger: TTGCCTCCAACTGCTGTTCCATAAACTCACCTCCTC...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp CTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCGAGGAGGTGAGTTTATaGAACAGCAGTTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LPRSSVVLLRLGHQRSFPEEVSL*NSSWRQ
Trigger: TTGCCTCCAACTGCTGTTCCATAAACTCACCTCCTC...GGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp CATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGATCATTCCCCTGGGTaGCTCCAACTCTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: HQRSFPWVAPTLVKVNKHDHSPG*LQLWSK
Trigger: CTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATC...ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCAGAGATCATTCCCCTaGGTGGCTCCAACTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGQRSFP*VAPTLV
Trigger: GACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTG...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGATCATTCCCCTGGGTaGCTCCAACTCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGDHSPG*LQLWSL
Trigger: CAGAGACCAGAGTTGGAGCCACCCAGGGGAATGATC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513476.5
CDS-3UTR TCA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCCTTCACAAGTTGGCTaGCCTGTTCAAACGTGCCAC +
Preference number: 4 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHPSQVG*PVQTCH
Trigger: GTGGCACGTTTGAACAGGTCAGCCAACTTGTGAAGG...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTTCAGCAGTGCCTGGGTaGACGGGGAATGGAGAATTA +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGSAVPG*TGNGEL
Trigger: TAATTCTCCATTCCCCGTTCACCCAGGCACTGCTGA...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR TCA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGCCTTTGGATCTTTCCTaGACGCCTCACAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVPLDLS*TPHRFH
Trigger: ATGAAATCTGTGAGGCGTTCAGGAAAGATCCAAAGG...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp TTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATGAGATTGCTGAGCCTTaGTTTCTTCTCCCCATAAGC +
Preference number: 4 (lower is better)
Translates to: LGHQRSFPWVAPTLVKVNEIAEP*FLLPIS
Trigger: GCTTATGGGGAGAAGAAATCAAGGCTCAGCAATCTC...ATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp CTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCGCTCAAGTACCTTACTaGGGAATACTTCCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LPRSSVVLLRLGHQRSFPAQVPY*GILPED
Trigger: ATCTTCCGGAAGTATTCCTCAGTAAGGTACTTGAGC...GGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273951.13
ENST00000504199.5
CDS-3UTR GCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCTTGTTAACCAGCTTTaGCAGTTCCGTGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGLVNQL*QFRGCG
Trigger: GCCACACCCACGGAACTGGCAAAGCTGGTTAACAAG...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTACAGTGCTGAGGTCCTaGTGTCATAGCAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGTVLRS*CHSSQG
Trigger: ACCCTGACTGCTATGACACCAGGACCTCAGCACTGT...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp CTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGAACGGGGAATaGAGAATTACTTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: LPRSSVVLLRLGHQRSFPWVNGE*RITFTG
Trigger: TCCTGTGAAAGTAATTCTCCATTCCCCGTTCACCCA...GGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATGGGAATTCCTGTGGCTaGTGTTTCAGAGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHGNSCG*CFRAAM
Trigger: CATGGCTGCTCTGAAACACCAGCCACAGGAATTCCC...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGGGAATTCCTGTGGCTaGTGTTTCAGAGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGGNSCG*CFRAAM
Trigger: CATGGCTGCTCTGAAACACCAGCCACAGGAATTCCC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGGTAGGGAATTCCTGTaGCTGGTGTTTCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGGREFL*LVFQSS
Trigger: GCTGCTCTGAAACACCAGCCACAGGAATTCCCTACC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp CAGCATCAATCTCTGAATCACAGTAAAGAGGAGGTGAGTTTATGGAACAGCAGTGGTAGGGAATTCCTGTaGCTGGTGTTTCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QHQSLNHSKEEVSLWNSSGREFL*LVFQSS
Trigger: GCTGCTCTGAAACACCAGCCACAGGAATTCCCTACC...ACTGCTGTTCCATAAACTCACCTCCTCTTTACTGTGATTCAGAGATTGATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGCAAAAAGCATACAGTTaGGCTTGCAGAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVQKAYS*ACRGTA
Trigger: TGCTGTACCTCTGCAAGCCCAACTGTATGCTTTTTG...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp TGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCGTTCAGGCAGCTCTTTaGCCATGCAATCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: CLPRSSVVLLRLGHQRSFVQAAL*PCNLQR
Trigger: CCTCTGAAGATTGCATGGCCAAAGAGCTGCCTGAAC...GAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp CATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATCCAGTTCCGTGGGTGTaGCATCAGGCAATTTTGCTT +
Preference number: 4 (lower is better)
Translates to: HQRSFPWVAPTLVKVNKHPVPWV*HQAILL
Trigger: AAGCAAAATTGCCTGATGCCACACCCACGGAACTGG...ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGCTTTGCCAGTTCCGTaGGTGTGGCATCAGGCAATT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGALPVP*VWHQAI
Trigger: AATTGCCTGATGCCACACCCACGGAACTGGCAAAGC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR TCA 90 bp TGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCTAGTGACAGAGATGTaGAGTCCTCCTTTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: CLPRSSVVLLRLGHQRSFLVTEM*SPPFPD
Trigger: ATCTGGGAAAGGAGGACTTCACATCTCTGTCACTAG...GAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp CATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGAGATTGCTGAGCCTTaGTTTCTTCTCCCCATAAGC +
Preference number: 4 (lower is better)
Translates to: HQRSFPWVAPTLVKVNKHEIAEP*FLLPIS
Trigger: GCTTATGGGGAGAAGAAATCAAGGCTCAGCAATCTC...ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp TATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGGTTGGAGGCAAAGTCTaGGTGCTTGTTAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: YPSCLPRSSVVLLRLGHQVGGKV*VLVNQL
Trigger: AAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAAC...CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp AGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAGTTGGAGGCAAAGTCTaGGTGCTTGTTAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: RSFPWVAPTLVKVNKHASVGGKV*VLVNQL
Trigger: AAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAAC...TGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp ATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGGTTGGAGGCAAAGTCTaGGTGCTTGTTAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: IRDHSPGWLQLWSKLINMVGGKV*VLVNQL
Trigger: AAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAAC...CATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp GTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAGGACTACAGGATATTTCTACCAGAGAGTCTTaGAGCACCTCCTCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VAPTLVKVNKHASGLQDISTRES*STSSLL
Trigger: CAGGAGAGAGGAGGTGCTGCAAGACTCTCTGGTAGA...AATATCCTGTAGTCCTGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR GCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGCAGCTCTTTGGCCATaGAATCTTCAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGAALWP*NLQRQT
Trigger: AGTCTGCCTCTGAAGATTGCATGGCCAAAGAGCTGC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR GCA 90 bp ATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGGAGGCAAAGTCTGAGTaGTTGTTAACCAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: IRDHSPGWLQLWSKLINMEAKSE*LLTSFA
Trigger: GGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTC...CATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp CATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATTCCTCCTTTCCCAGATaGGAGAATTCCTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: HQRSFPWVAPTLVKVNKHSSFPR*ENSLQT
Trigger: AGTCTGCAAGGAATTCTCCCATCTGGGAAAGGAGGA...ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp TTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATACTTCCTTCACAAGTTaGCTGACCTGTTCAAACGTG +
Preference number: 4 (lower is better)
Translates to: LGHQRSFPWVAPTLVKVNTSFTS*LTCSNV
Trigger: CACGTTTGAACAGGTCAGCCAACTTGTGAAGGAAGT...ATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp TGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAGGACTACAGGATATTCACAGTGCTGAGGTCCTaGTGTCATAGCAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: WLQLWSKLINMLQDYRIFTVLRS*CHSSQG
Trigger: ACCCTGACTGCTATGACACCAGGACCTCAGCACTGT...GAATATCCTGTAGTCCTGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR CCA 90 bp GAACAGCAGTTGGAGGCAAAGTCTGAGTGCTTGTTAACCAGCTTTGCCAGTTCCATTAGCATATTCCTTTaGATCTTTCCTGAACGCCTC +
Preference number: 4 (lower is better)
Translates to: EQQLEAKSECLLTSFASSISIFL*IFPERL
Trigger: GAGGCGTTCAGGAAAGATCCAAAGGAATATGCTAAT...GGAACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAACTGCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR CCA 90 bp GAACAGCAGTTGGAGGCAAAGTCTGAGTGCTTGTTAACCAGCTTTGCCAGTTCCGCAGTAGGCACTTTTTaGGCTAACTTTATGAGATTG +
Preference number: 4 (lower is better)
Translates to: EQQLEAKSECLLTSFASSAVGTF*ANFMRL
Trigger: CAATCTCATAAAGTTAGCCCAAAAAGTGCCTACTGC...GGAACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAACTGCTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR CCA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATGTTCAGGCAGCTCTTTaGCCATGCAATCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHVQAAL*PCNLQR
Trigger: CCTCTGAAGATTGCATGGCCAAAGAGCTGCCTGAAC...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGTTCAGGCAGCTCTTTaGCCATGCAATCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGVQAAL*PCNLQR
Trigger: CCTCTGAAGATTGCATGGCCAAAGAGCTGCCTGAAC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCCAGTTCCGTGGGTGTaGCATCAGGCAATTTTGCTT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGPVPWV*HQAILL
Trigger: AAGCAAAATTGCCTGATGCCACACCCACGGAACTGG...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp CATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGAGGAGGTGAGTTTATaGAACAGCAGTTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: HQRSFPWVAPTLVKVNKHEEVSL*NSSWRQ
Trigger: TTGCCTCCAACTGCTGTTCCATAAACTCACCTCCTC...ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp TGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAGGACTACAGGATATTCGATCATTCCCCTGGGTaGCTCCAACTCTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: WLQLWSKLINMLQDYRIFDHSPG*LQLWSK
Trigger: CTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATC...GAATATCCTGTAGTCCTGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509740.5
3UTR CAA 72 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTaGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KYPSCLPRSSVV*LRLGHQRSFPW
Trigger: CCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCTAGTGACAGAGATGTaGAGTCCTCCTTTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGLVTEM*SPPFPD
Trigger: ATCTGGGAAAGGAGGACTTCACATCTCTGTCACTAG...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR TCA 90 bp GTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACAACTCTTGGTGTAACTaGCTAAAAGTGACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VIRDHSPGWLQLWSKLINNSWCN*LKVTEE
Trigger: CTCCTCTGTCACTTTTAGTCAGTTACACCAAGAGTT...GTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGAGATTGCTGAGCCTTaGTTTCTTCTCCCCATAAGC +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGEIAEP*FLLPIS
Trigger: GCTTATGGGGAGAAGAAATCAAGGCTCAGCAATCTC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR TCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGTTGGAGGCAAAGTCTaGGTGCTTGTTAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGVGGKV*VLVNQL
Trigger: AAGCTGGTTAACAAGCACTCAGACTTTGCCTCCAAC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR TCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTTCCAACTCTGGTCTCTaGATCACAGTAAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGSNSGL*ITVKRR
Trigger: CCTCCTCTTTACTGTGATTCAGAGACCAGAGTTGGA...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513476.5
CDS-3UTR GCA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATGAGGCAAAGTCTGAGTaGTTGTTAACCAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHEAKSE*LLTSFA
Trigger: GGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTC...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGAGGCAAAGTCTGAGTaGTTGTTAACCAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGEAKSE*LLTSFA
Trigger: GGCAAAGCTGGTTAACAAGCACTCAGACTTTGCCTC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATTCCTCCTTTCCCAGATaGGAGAATTCCTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHSSFPR*ENSLQT
Trigger: AGTCTGCAAGGAATTCTCCCATCTGGGAAAGGAGGA...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTTCCTCCTTTCCCAGATaGGAGAATTCCTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGSSFPR*ENSLQT
Trigger: AGTCTGCAAGGAATTCTCCCATCTGGGAAAGGAGGA...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp TATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGCAAAAAGCATACAGTTaGGCTTGCAGAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: YPSCLPRSSVVLLRLGHQQKAYS*ACRGTA
Trigger: TGCTGTACCTCTGCAAGCCCAACTGTATGCTTTTTG...CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCACAAAAAGCATACAGTTaGGCTTGCAGAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: RSFPWVAPTLVKVNKHASQKAYS*ACRGTA
Trigger: TGCTGTACCTCTGCAAGCCCAACTGTATGCTTTTTG...TGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp CTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCGCAGTAGGCACTTTTTaGGCTAACTTTATGAGATTG +
Preference number: 4 (lower is better)
Translates to: LPRSSVVLLRLGHQRSFPAVGTF*ANFMRL
Trigger: CAATCTCATAAAGTTAGCCCAAAAAGTGCCTACTGC...GGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCATTATGGAACAGCAGTTaGAGGCAAAGTCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RSFPWVAPTLVKVNKHASLWNSS*RQSLSA
Trigger: AGCACTCAGACTTTGCCTCCAACTGCTGTTCCATAA...TGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp ATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGTTATGGAACAGCAGTTaGAGGCAAAGTCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: IRDHSPGWLQLWSKLINMLWNSS*RQSLSA
Trigger: AGCACTCAGACTTTGCCTCCAACTGCTGTTCCATAA...CATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGAGGAGGTGAGTTTATaGAACAGCAGTTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGEEVSL*NSSWRQ
Trigger: TTGCCTCCAACTGCTGTTCCATAAACTCACCTCCTC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGGGTGGCTCCAACTCTaGTCTCTGAATCACAGTAAA +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGGWLQL*SLNHSK
Trigger: TTTACTGTGATTCAGAGACCAGAGTTGGAGCCACCC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513476.5
CDS-3UTR TCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCCTTTGGATCTTTCCTaGACGCCTCACAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGPLDLS*TPHRFH
Trigger: ATGAAATCTGTGAGGCGTTCAGGAAAGATCCAAAGG...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR TCA 90 bp CAGCATCAATCTCTGAATCACAGTAAAGAGGAGGTGAGTTTATGGAACAGCAGTCCTTTGGATCTTTCCTaGACGCCTCACAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: QHQSLNHSKEEVSLWNSSPLDLS*TPHRFH
Trigger: ATGAAATCTGTGAGGCGTTCAGGAAAGATCCAAAGG...ACTGCTGTTCCATAAACTCACCTCCTCTTTACTGTGATTCAGAGATTGATGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR TCA 90 bp AGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAAACTCTTGGTGTAACTaGCTAAAAGTGACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RSFPWVAPTLVKVNKHASNSWCN*LKVTEE
Trigger: CTCCTCTGTCACTTTTAGTCAGTTACACCAAGAGTT...TGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGCTCAAGTACCTTACTaGGGAATACTTCCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGAQVPY*GILPED
Trigger: ATCTTCCGGAAGTATTCCTCAGTAAGGTACTTGAGC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000513476.5
CDS-3UTR TCA 90 bp TTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATCTTGTCCCTTGTCAATaGAAGAAGATAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LGHQRSFPWVAPTLVKVNLVPCQ*KKIVPS
Trigger: AGAAGGAACTATCTTCTTTCATTGACAAGGGACAAG...ATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGACTTGTCCCTTGTCAATaGAAGAAGATAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRLVPCQ*KKIVPS
Trigger: AGAAGGAACTATCTTCTTTCATTGACAAGGGACAAG...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp AGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAACAGTAAAGAGGAGGTaGGTTTATGGAACAGCAGTT +
Preference number: 4 (lower is better)
Translates to: RSFPWVAPTLVKVNKHASTVKRR*VYGTAV
Trigger: AACTGCTGTTCCATAAACTCACCTCCTCTTTACTGT...TGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp TGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCACAGTAAAGAGGAGGTaGGTTTATGGAACAGCAGTT +
Preference number: 4 (lower is better)
Translates to: CLPRSSVVLLRLGHQRSFTVKRR*VYGTAV
Trigger: AACTGCTGTTCCATAAACTCACCTCCTCTTTACTGT...GAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp TGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCTTCAGCATCAATCTCTaGATCACAGTAAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CLPRSSVVLLRLGHQRSFFSINL*ITVKRR
Trigger: CCTCCTCTTTACTGTGATTCAGAGATTGATGCTGAA...GAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp TATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGTTCAGCATCAATCTCTaGATCACAGTAAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YPSCLPRSSVVLLRLGHQFSINL*ITVKRR
Trigger: CCTCCTCTTTACTGTGATTCAGAGATTGATGCTGAA...CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp ATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGTTCAGCATCAATCTCTaGATCACAGTAAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: IRDHSPGWLQLWSKLINMFSINL*ITVKRR
Trigger: CCTCCTCTTTACTGTGATTCAGAGATTGATGCTGAA...CATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR GCA 90 bp CTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGATGGGAGAATTCCTTaGAGACTTTATTCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LRLGHQRSFPWVAPTLVKDGRIP*RLYSFH
Trigger: ATGAAAAGAATAAAGTCTGCAAGGAATTCTCCCATC...TTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAACCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTTGGGTGAACGGGGAATaGAGAATTACTTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGWVNGE*RITFTG
Trigger: TCCTGTGAAAGTAATTCTCCATTCCCCGTTCACCCA...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp TTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATATTAGCATATTCCTTTaGATCTTTCCTGAACGCCTC +
Preference number: 4 (lower is better)
Translates to: LGHQRSFPWVAPTLVKVNISIFL*IFPERL
Trigger: GAGGCGTTCAGGAAAGATCCAAAGGAATATGCTAAT...ATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCAAAAAGCATACAGTTaGGCTTGCAGAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGQKAYS*ACRGTA
Trigger: TGCTGTACCTCTGCAAGCCCAACTGTATGCTTTTTG...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGAACACATCTTTGTTTGTaGGCAACTCTACATCTGGAA +
Preference number: 4 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRTHLCL*ATLHLE
Trigger: TTCCAGATGTAGAGTTGCCCACAAACAAAGATGTGT...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTTTATGGAACAGCAGTTaGAGGCAAAGTCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGLWNSS*RQSLSA
Trigger: AGCACTCAGACTTTGCCTCCAACTGCTGTTCCATAA...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR TCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTAACTCTTGGTGTAACTaGCTAAAAGTGACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGNSWCN*LKVTEE
Trigger: CTCCTCTGTCACTTTTAGTCAGTTACACCAAGAGTT...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR TCA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATACAGTAAAGAGGAGGTaGGTTTATGGAACAGCAGTT +
Preference number: 4 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHTVKRR*VYGTAV
Trigger: AACTGCTGTTCCATAAACTCACCTCCTCTTTACTGT...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTACAGTAAAGAGGAGGTaGGTTTATGGAACAGCAGTT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGTVKRR*VYGTAV
Trigger: AACTGCTGTTCCATAAACTCACCTCCTCTTTACTGT...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR GCA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGGATGGGAGAATTCCTTaGAGACTTTATTCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVDGRIP*RLYSFH
Trigger: ATGAAAAGAATAAAGTCTGCAAGGAATTCTCCCATC...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp AGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAATTAGCATATTCCTTTaGATCTTTCCTGAACGCCTC +
Preference number: 4 (lower is better)
Translates to: RSFPWVAPTLVKVNKHASISIFL*IFPERL
Trigger: GAGGCGTTCAGGAAAGATCCAAAGGAATATGCTAAT...TGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp CATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCAGTAGGCACTTTTTaGGCTAACTTTATGAGATTG +
Preference number: 4 (lower is better)
Translates to: HQRSFPWVAPTLVKVNKHAVGTF*ANFMRL
Trigger: CAATCTCATAAAGTTAGCCCAAAAAGTGCCTACTGC...ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CCA 90 bp ATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGACACATCTTTGTTTGTaGGCAACTCTACATCTGGAA +
Preference number: 4 (lower is better)
Translates to: IRDHSPGWLQLWSKLINMTHLCL*ATLHLE
Trigger: TTCCAGATGTAGAGTTGCCCACAAACAAAGATGTGT...CATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR TCA 90 bp TGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCATGTATACTTATCCATaGCTTTGGTGTTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: CLPRSSVVLLRLGHQRSFMYTYP*LWCFLD
Trigger: ATCCAGGAAACACCAAAGTCATGGATAAGTATACAT...GAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273951.13
ENST00000504199.5
CDS-3UTR TCA 90 bp TATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGATTAAAACAGGTAGTTaGGTCTTCAACATCACAGCA +
Preference number: 4 (lower is better)
Translates to: YPSCLPRSSVVLLRLGHQIKTGS*VFNITA
Trigger: TGCTGTGATGTTGAAGACTCAACTACCTGTTTTAAT...CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273951.13
ENST00000504199.5
CDS-3UTR TCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCTTGTCCCTTGTCAATaGAAGAAGATAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGLVPCQ*KKIVPS
Trigger: AGAAGGAACTATCTTCTTTCATTGACAAGGGACAAG...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR GCA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGAGAAGATGAGTCCTTCTaGTTAGTTCAAATGTATACT +
Preference number: 4 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQREDESF*LVQMYT
Trigger: AGTATACATTTGAACTAAGCAGAAGGACTCATCTTC...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273951.13
ENST00000504199.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTATTAGCATATTCCTTTaGATCTTTCCTGAACGCCTC +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGISIFL*IFPERL
Trigger: GAGGCGTTCAGGAAAGATCCAAAGGAATATGCTAAT...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGCAGTAGGCACTTTTTaGGCTAACTTTATGAGATTG +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGAVGTF*ANFMRL
Trigger: CAATCTCATAAAGTTAGCCCAAAAAGTGCCTACTGC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTACACATCTTTGTTTGTaGGCAACTCTACATCTGGAA +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGTHLCL*ATLHLE
Trigger: TTCCAGATGTAGAGTTGCCCACAAACAAAGATGTGT...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR TCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTATGTATACTTATCCATaGCTTTGGTGTTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGMYTYP*LWCFLD
Trigger: ATCCAGGAAACACCAAAGTCATGGATAAGTATACAT...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000513476.5
CDS-3UTR TCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTATTAAAACAGGTAGTTaGGTCTTCAACATCACAGCA +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGIKTGS*VFNITA
Trigger: TGCTGTGATGTTGAAGACTCAACTACCTGTTTTAAT...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000513476.5
CDS-3UTR GCA 90 bp AGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAGAAGATGAGTCCTTCTaGTTAGTTCAAATGTATACT +
Preference number: 4 (lower is better)
Translates to: RSFPWVAPTLVKVNKHASEDESF*LVQMYT
Trigger: AGTATACATTTGAACTAAGCAGAAGGACTCATCTTC...TGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273951.13
ENST00000504199.5
CDS-3UTR GCA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGAAGATGAGTCCTTCTaGTTAGTTCAAATGTATACT +
Preference number: 4 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGEDESF*LVQMYT
Trigger: AGTATACATTTGAACTAAGCAGAAGGACTCATCTTC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000513476.5
CDS-3UTR GCA 90 bp TGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAGGACTACAGGATATTCGATGGGAGAATTCCTTaGAGACTTTATTCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: WLQLWSKLINMLQDYRIFDGRIP*RLYSFH
Trigger: ATGAAAAGAATAAAGTCTGCAAGGAATTCTCCCATC...GAATATCCTGTAGTCCTGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS CCA 90 bp GGTGTTTCAGAGCAGCCATGCAGAGCTTTCGTTCCAGGCCCTCTTTaGTGCAGCACTCAGCAGTGCCTGGGTGAACGGGGAATGGAGAAT +
Preference number: 5 (lower is better)
Translates to: GVSEQPCRAFVPGPL*CSTQQCLGERGMEN
Trigger: ATTCTCCATTCCCCGTTCACCCAGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAACGAAAGCTCTGCATGGCTGCTCTGAAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS GCA 90 bp GTTTCAGAGCAGCCATGCAGAGCTTTCGTTCCAGGCCCTCTTTGGTaGAGCACTCAGCAGTGCCTGGGTGAACGGGGAATGGAGAATTAC +
Preference number: 5 (lower is better)
Translates to: VSEQPCRAFVPGPLW*STQQCLGERGMENY
Trigger: GTAATTCTCCATTCCCCGTTCACCCAGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAACGAAAGCTCTGCATGGCTGCTCTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS GCA 90 bp TGCAGAGCTTTCGTTCCAGGCCCTCTTTGGTGCAGCACTCAGCAGTaGCTGGGTGAACGGGGAATGGAGAATTACTTTCACAGGACTTGG +
Preference number: 5 (lower is better)
Translates to: CRAFVPGPLWCSTQQ*LGERGMENYFHRTW
Trigger: CCAAGTCCTGTGAAAGTAATTCTCCATTCCCCGTTCACCCAGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAACGAAAGCTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS CCA 90 bp GAGCTTTCGTTCCAGGCCCTCTTTGGTGCAGCACTCAGCAGTGCCTaGGTGAACGGGGAATGGAGAATTACTTTCACAGGACTTGGCAGA +
Preference number: 5 (lower is better)
Translates to: ELSFQALFGAALSSA*VNGEWRITFTGLGR
Trigger: TCTGCCAAGTCCTGTGAAAGTAATTCTCCATTCCCCGTTCACCCAGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAACGAAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp CTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAACGTTCCAGGCCCTCTTaGGTGCAGCACTCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LRLGHQRSFPWVAPTLVKRSRPS*VQHSAV
Trigger: CACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAACG...TTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAACCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS TCA 90 bp TTTCGTTCCAGGCCCTCTTTGGTGCAGCACTCAGCAGTGCCTGGGTaGACGGGGAATGGAGAATTACTTTCACAGGACTTGGCAGACAGT +
Preference number: 5 (lower is better)
Translates to: FRSRPSLVQHSAVPG*TGNGELLSQDLADS
Trigger: ACTGTCTGCCAAGTCCTGTGAAAGTAATTCTCCATTCCCCGTTCACCCAGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAACGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGTGGAAGCTCGGGGAGTaGGGCAGCTGGCATGAAGTA +
Preference number: 5 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVWKLGE*GSWHEV
Trigger: TACTTCATGCCAGCTGCCCAACTCCCCGAGCTTCCA...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS CCA 90 bp ACAGATTTCATCATTTGTGGGTTCCACGTAGGTAGGGAATTCCTGTaGCTGGTGTTTCAGAGCAGCCATGCAGAGCTTTCGTTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: TDFIICGFHVGREFL*LVFQSSHAELSFQA
Trigger: GGCCTGGAACGAAAGCTCTGCATGGCTGCTCTGAAACACCAGCCACAGGAATTCCCTACCTACGTGGAACCCACAAATGATGAAATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS CCA 90 bp GTTTCCTGGATCACACACATCTTTGTTTGTGGGCAACTCTACATCTaGAAGCTCGGGGAGTTGGGCAGCTGGCATGAAGTAAGTGCACAC +
Preference number: 5 (lower is better)
Translates to: VSWITHIFVCGQLYI*KLGELGSWHEVSAH
Trigger: GTGTGCACTTACTTCATGCCAGCTGCCCAACTCCCCGAGCTTCCAGATGTAGAGTTGCCCACAAACAAAGATGTGTGTGATCCAGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS CCA 90 bp TCCGCACAGCAGGCTTCGGTCAAGGAGACAACTTCCTTCACAAGTTaGCTGACCTGTTCAAACGTGCCACTGGGAAATTTTCTACTGTAC +
Preference number: 5 (lower is better)
Translates to: SAQQASVKETTSFTS*LTCSNVPLGNFLLY
Trigger: GTACAGTAGAAAATTTCCCAGTGGCACGTTTGAACAGGTCAGCCAACTTGTGAAGGAAGTTGTCTCCTTGACCGAAGCCTGCTGTGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCGTTCCAGGCCCTCTTaGGTGCAGCACTCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGRSRPS*VQHSAV
Trigger: CACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAACG...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCGTTCCAGGCCCTCTTaGGTGCAGCACTCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHRSRPS*VQHSAV
Trigger: CACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAACG...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp CATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATTGGAAGCTCGGGGAGTaGGGCAGCTGGCATGAAGTA +
Preference number: 5 (lower is better)
Translates to: HQRSFPWVAPTLVKVNKHWKLGE*GSWHEV
Trigger: TACTTCATGCCAGCTGCCCAACTCCCCGAGCTTCCA...ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp TATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGTGGAAGCTCGGGGAGTaGGGCAGCTGGCATGAAGTA +
Preference number: 5 (lower is better)
Translates to: YPSCLPRSSVVLLRLGHQWKLGE*GSWHEV
Trigger: TACTTCATGCCAGCTGCCCAACTCCCCGAGCTTCCA...CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS TCA 90 bp CACAGCAGGCTTCGGTCAAGGAGACAACTTCCTTCACAAGTTGGCTaGCCTGTTCAAACGTGCCACTGGGAAATTTTCTACTGTACAGGA +
Preference number: 5 (lower is better)
Translates to: HSRLRSRRQLPSQVG*PVQTCHWEIFYCTG
Trigger: TCCTGTACAGTAGAAAATTTCCCAGTGGCACGTTTGAACAGGTCAGCCAACTTGTGAAGGAAGTTGTCTCCTTGACCGAAGCCTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGTTACTTTCACAGGACTaGGCAGACAGTGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVLLSQD*ADSAEV
Trigger: GACCTCAGCACTGTCTGCCAAGTCCTGTGAAAGTAA...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAAGCATACAGTTGGGCTaGCAGAGGTACAGCAGGACC +
Preference number: 5 (lower is better)
Translates to: RSFPWVAPTLVKVNKHASSIQLG*QRYSRT
Trigger: GGTCCTGCTGTACCTCTGCAAGCCCAACTGTATGCT...TGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp TGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCAGCATACAGTTGGGCTaGCAGAGGTACAGCAGGACC +
Preference number: 5 (lower is better)
Translates to: CLPRSSVVLLRLGHQRSFSIQLG*QRYSRT
Trigger: GGTCCTGCTGTACCTCTGCAAGCCCAACTGTATGCT...GAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTTGGAAGCTCGGGGAGTaGGGCAGCTGGCATGAAGTA +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGWKLGE*GSWHEV
Trigger: TACTTCATGCCAGCTGCCCAACTCCCCGAGCTTCCA...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTAGCATACAGTTGGGCTaGCAGAGGTACAGCAGGACC +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGSIQLG*QRYSRT
Trigger: GGTCCTGCTGTACCTCTGCAAGCCCAACTGTATGCT...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp CTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGGATCACACACATCTTaGTTTGTGGGCAACTCTACA +
Preference number: 5 (lower is better)
Translates to: LRLGHQRSFPWVAPTLVKGSHTS*FVGNST
Trigger: TGTAGAGTTGCCCACAAACAAAGATGTGTGTGATCC...TTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAACCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGAACTTCCTTCACAAGTaGGCTGACCTGTTCAAACGT +
Preference number: 5 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVNFLHK*ADLFKR
Trigger: ACGTTTGAACAGGTCAGCCAACTTGTGAAGGAAGTT...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCATGTTCAGGCAGCTCTTaGGCCATGCAATCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: RSFPWVAPTLVKVNKHASCSGSS*AMQSSE
Trigger: CTCTGAAGATTGCATGGCCAAAGAGCTGCCTGAACA...TGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp TATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGTGTTCAGGCAGCTCTTaGGCCATGCAATCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: YPSCLPRSSVVLLRLGHQCSGSS*AMQSSE
Trigger: CTCTGAAGATTGCATGGCCAAAGAGCTGCCTGAACA...CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp CTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCGGATCACACACATCTTaGTTTGTGGGCAACTCTACA +
Preference number: 5 (lower is better)
Translates to: LPRSSVVLLRLGHQRSFPGSHTS*FVGNST
Trigger: TGTAGAGTTGCCCACAAACAAAGATGTGTGTGATCC...GGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATGGCATCAGGCAATTTaGCTTTTAGTCGCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRWHQAI*LLVALP
Trigger: TGGCAGAGCGACTAAAAGCAAAATTGCCTGATGCCA...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGAGCAAAGTCTGAGTGCTaGTTAACCAGCTTTGCCAGT +
Preference number: 5 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRAKSEC*LTSFAS
Trigger: ACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGC...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATTTATGGAACAGCAGTaGGAGGCAAAGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRFMEQQ*EAKSEC
Trigger: GCACTCAGACTTTGCCTCCAACTGCTGTTCCATAAA...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGAGAAGCTCAGTGGTTTaGCTTAGGTTAGGTCATCAG +
Preference number: 5 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVRSSVV*LRLGHQ
Trigger: CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATTTACTTTCACAGGACTaGGCAGACAGTGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHLLSQD*ADSAEV
Trigger: GACCTCAGCACTGTCTGCCAAGTCCTGTGAAAGTAA...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp ATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGTCAAAAAGCATACAGTaGGGCTTGCAGAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: IRDHSPGWLQLWSKLINMSKSIQ*GLQRYS
Trigger: GCTGTACCTCTGCAAGCCCAACTGTATGCTTTTTGA...CATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp TATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGTCAAAAAGCATACAGTaGGGCTTGCAGAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: YPSCLPRSSVVLLRLGHQSKSIQ*GLQRYS
Trigger: GCTGTACCTCTGCAAGCCCAACTGTATGCTTTTTGA...CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp TGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCTCAAAAAGCATACAGTaGGGCTTGCAGAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: CLPRSSVVLLRLGHQRSFSKSIQ*GLQRYS
Trigger: GCTGTACCTCTGCAAGCCCAACTGTATGCTTTTTGA...GAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGGCAGACTCACAGCATTaGGAGAGGATGTTAGTAATA +
Preference number: 5 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVADSQH*ERMLVI
Trigger: TATTACTAACATCCTCTCCAAATGCTGTGAGTCTGC...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATTGTTCAGGCAGCTCTTaGGCCATGCAATCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHCSGSS*AMQSSE
Trigger: CTCTGAAGATTGCATGGCCAAAGAGCTGCCTGAACA...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTTGTTCAGGCAGCTCTTaGGCCATGCAATCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGCSGSS*AMQSSE
Trigger: CTCTGAAGATTGCATGGCCAAAGAGCTGCCTGAACA...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp CTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTACTTATCCATGACTTaGGTGTTTCCTGGATCACAC +
Preference number: 5 (lower is better)
Translates to: LPRSSVVLLRLGHQRSFPYLSMT*VFPGSH
Trigger: GTGTGATCCAGGAAACACCAAAGTCATGGATAAGTA...GGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273951.13
ENST00000504199.5
CDS-3UTR CAA 90 bp TATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGTGGCATCAGGCAATTTaGCTTTTAGTCGCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: YPSCLPRSSVVLLRLGHQWHQAI*LLVALP
Trigger: TGGCAGAGCGACTAAAAGCAAAATTGCCTGATGCCA...CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp CCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGAAGAAGCTCAGTGGTTTaGCTTAGGTTAGGTCATCAG +
Preference number: 5 (lower is better)
Translates to: PSCLPRSSVVLLRLGHQRRSSVV*LRLGHQ
Trigger: CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT...TCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAGCCTTATCCATGACTTaGGTGTTTCCTGGATCACAC +
Preference number: 5 (lower is better)
Translates to: RSFPWVAPTLVKVNKHASALSMT*VFPGSH
Trigger: GTGTGATCCAGGAAACACCAAAGTCATGGATAAGGC...TGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS TCA 90 bp CACAGCATTCACCAAGGCTTTTTAGGGTTGGCTCAAGTACCTTACTaGGGAATACTTCCGGAAGATGAGTCCTTCTGCTTAGTTCAAATG +
Preference number: 5 (lower is better)
Translates to: HSIHQGFLGLAQVPY*GILPEDESFCLVQM
Trigger: CATTTGAACTAAGCAGAAGGACTCATCTTCCGGAAGTATTCCTCAGTAAGGTACTTGAGCCAACCCTAAAAAGCCTTGGTGAATGCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000513476.5
CDS CCA 90 bp GTTCCTTCTTTAGTAGAGGGCCTTATCCATGACTTTGGTGTTTCCTaGATCACACACATCTTTGTTTGTGGGCAACTCTACATCTGGAAG +
Preference number: 5 (lower is better)
Translates to: VPSLVEGLIHDFGVS*ITHIFVCGQLYIWK
Trigger: CTTCCAGATGTAGAGTTGCCCACAAACAAAGATGTGTGTGATCCAGGAAACACCAAAGTCATGGATAAGGCCCTCTACTAAAGAAGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTTCAAAAAGCATACAGTaGGGCTTGCAGAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGSKSIQ*GLQRYS
Trigger: GCTGTACCTCTGCAAGCCCAACTGTATGCTTTTTGA...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp AGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCTGGGTGGCTAACTTTATGAGATaGCTGAGCCTTGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: RSSVVLLRLGHQRSFPWVANFMR*LSLDFF
Trigger: GAAGAAATCAAGGCTCAGCAATCTCATAAAGTTAGC...CACCCAGGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp CTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCCCGCTAACTTTATGAGATaGCTGAGCCTTGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: LPRSSVVLLRLGHQRSFPANFMR*LSLDFF
Trigger: GAAGAAATCAAGGCTCAGCAATCTCATAAAGTTAGC...GGGGAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp GTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACGCAGACTCACAGCATTaGGAGAGGATGTTAGTAATA +
Preference number: 5 (lower is better)
Translates to: VIRDHSPGWLQLWSKLINADSQH*ERMLVI
Trigger: TATTACTAACATCCTCTCCAAATGCTGTGAGTCTGC...GTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTTGGCATCAGGCAATTTaGCTTTTAGTCGCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGWHQAI*LLVALP
Trigger: TGGCAGAGCGACTAAAAGCAAAATTGCCTGATGCCA...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATGCAAAGTCTGAGTGCTaGTTAACCAGCTTTGCCAGT +
Preference number: 5 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHAKSEC*LTSFAS
Trigger: ACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGC...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGCAAAGTCTGAGTGCTaGTTAACCAGCTTTGCCAGT +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGAKSEC*LTSFAS
Trigger: ACTGGCAAAGCTGGTTAACAAGCACTCAGACTTTGC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATTTTATGGAACAGCAGTaGGAGGCAAAGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHFMEQQ*EAKSEC
Trigger: GCACTCAGACTTTGCCTCCAACTGCTGTTCCATAAA...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTTTTATGGAACAGCAGTaGGAGGCAAAGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGFMEQQ*EAKSEC
Trigger: GCACTCAGACTTTGCCTCCAACTGCTGTTCCATAAA...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp CATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACATAGAAGCTCAGTGGTTTaGCTTAGGTTAGGTCATCAG +
Preference number: 5 (lower is better)
Translates to: HQRSFPWVAPTLVKVNKHRSSVV*LRLGHQ
Trigger: CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT...ATGTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS GCA 90 bp ATGTTTAAGCTGGAGTCTCTCTTTCAAAAAGCATACAGTTGGGCTTaGAGAGGTACAGCAGGACCCTACCATAGAAAGATAACTCTTGGT +
Preference number: 5 (lower is better)
Translates to: MFKLESLFQKAYSWA*RGTAGPYHRKITLG
Trigger: ACCAAGAGTTATCTTTCTATGGTAGGGTCCTGCTGTACCTCTGCAAGCCCAACTGTATGCTTTTTGAAAGAGAGACTCCAGCTTAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATAACTTCCTTCACAAGTaGGCTGACCTGTTCAAACGT +
Preference number: 5 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHNFLHK*ADLFKR
Trigger: ACGTTTGAACAGGTCAGCCAACTTGTGAAGGAAGTT...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTAACTTCCTTCACAAGTaGGCTGACCTGTTCAAACGT +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGNFLHK*ADLFKR
Trigger: ACGTTTGAACAGGTCAGCCAACTTGTGAAGGAAGTT...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGGATCACACACATCTTaGTTTGTGGGCAACTCTACA +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGGSHTS*FVGNST
Trigger: TGTAGAGTTGCCCACAAACAAAGATGTGTGTGATCC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp TGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCTACTTATCCATGACTTaGGTGTTTCCTGGATCACAC +
Preference number: 5 (lower is better)
Translates to: CLPRSSVVLLRLGHQRSFYLSMT*VFPGSH
Trigger: GTGTGATCCAGGAAACACCAAAGTCATGGATAAGTA...GAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273951.13
ENST00000504199.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTAGAAGCTCAGTGGTTTaGCTTAGGTTAGGTCATCAG +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGRSSVV*LRLGHQ
Trigger: CTGATGACCTAACCTAAGCAAAACCACTGAGCTTCT...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGCAGACTCACAGCATTaGGAGAGGATGTTAGTAATA +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGADSQH*ERMLVI
Trigger: TATTACTAACATCCTCTCCAAATGCTGTGAGTCTGC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp TGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAGGACTACAGGATATTCGGATCACACACATCTTaGTTTGTGGGCAACTCTACA +
Preference number: 5 (lower is better)
Translates to: WLQLWSKLINMLQDYRIFGSHTS*FVGNST
Trigger: TGTAGAGTTGCCCACAAACAAAGATGTGTGTGATCC...GAATATCCTGTAGTCCTGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTTACTTATCCATGACTTaGGTGTTTCCTGGATCACAC +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGYLSMT*VFPGSH
Trigger: GTGTGATCCAGGAAACACCAAAGTCATGGATAAGTA...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000513476.5
CDS-3UTR CAA 90 bp GTCATCAGAGATCATTCCCCTGGGTGGCTCCAACTCTGGTCAAAGTTAATAAACCATAGTTCTTGTCCCTaGTCAATGAAAGAAGATAGT +
Preference number: 5 (lower is better)
Translates to: VIRDHSPGWLQLWSKLINHSSCP*SMKEDS
Trigger: ACTATCTTCTTTCATTGACAAGGGACAAGAACTATG...GTTTATTAACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTGCTAACTTTATGAGATaGCTGAGCCTTGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGANFMR*LSLDFF
Trigger: GAAGAAATCAAGGCTCAGCAATCTCATAAAGTTAGC...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS-3UTR CAA 90 bp TGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCAGAGATCATTCCATAGTTCTTGTCCCTaGTCAATGAAAGAAGATAGT +
Preference number: 5 (lower is better)
Translates to: CLPRSSVVLLRLGHQRSFHSSCP*SMKEDS
Trigger: ACTATCTTCTTTCATTGACAAGGGACAAGAACTATG...GAATGATCTCTGATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS TCA 90 bp TTTAGGGTTGGCTCAAGTACCTTACTGAGGAATACTTCCGGAAGATaGGTCCTTCTGCTTAGTTCAAATGTATACTTATCCATGACTTTG +
Preference number: 5 (lower is better)
Translates to: FRVGSSTLLRNTSGR*VLLLSSNVYLSMTL
Trigger: CAAAGTCATGGATAAGTATACATTTGAACTAAGCAGAAGGACTCATCTTCCGGAAGTATTCCTCAGTAAGGTACTTGAGCCAACCCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000513476.5
CDS-3UTR CAA 90 bp GTGGCTCCAACTCTGGTCAAAGTTAATAAACATGCTTCAGGACTACAGGATATTGCTAACTTTATGAGATaGCTGAGCCTTGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: VAPTLVKVNKHASGLQDIANFMR*LSLDFF
Trigger: GAAGAAATCAAGGCTCAGCAATCTCATAAAGTTAGC...AATATCCTGTAGTCCTGAAGCATGTTTATTAACTTTGACCAGAGTTGGAGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS-3UTR CAA 90 bp AAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATCATAGTTCTTGTCCCTaGTCAATGAAAGAAGATAGT +
Preference number: 5 (lower is better)
Translates to: KYPSCLPRSSVVLLRLGHHSSCP*SMKEDS
Trigger: ACTATCTTCTTTCATTGACAAGGGACAAGAACTATG...ATGACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
CDS-3UTR CAA 90 bp AGAAAGTATCCTAGTTGTCTTCCCAGAAGCTCAGTGGTTTTGCTTAGGTTAGGTCATAGTTCTTGTCCCTaGTCAATGAAAGAAGATAGT +
Preference number: 5 (lower is better)
Translates to: RKYPSCLPRSSVVLLRLGHSSCP*SMKEDS
Trigger: ACTATCTTCTTTCATTGACAAGGGACAAGAACTATG...ACCTAACCTAAGCAAAACCACTGAGCTTCTGGGAAGACAACTAGGATACTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS CCA 72 bp GAGCAGCCATGCAGAGCTTTCGTTCCAGGCCCTCTTTaGTGCAGCACTCAGCAGTGCCTGGGTGAACGGGGA +
Preference number: 6 (lower is better)
Translates to: EQPCRAFVPGPL*CSTQQCLGERG
Trigger: TCCCCGTTCACCCAGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAACGAAAGCTCTGCATGGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS GCA 72 bp CAGCCATGCAGAGCTTTCGTTCCAGGCCCTCTTTGGTaGAGCACTCAGCAGTGCCTGGGTGAACGGGGAATG +
Preference number: 6 (lower is better)
Translates to: QPCRAFVPGPLW*STQQCLGERGM
Trigger: CATTCCCCGTTCACCCAGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAACGAAAGCTCTGCATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS CCA 72 bp GAGCAGCCATGCAGAGCTTTCGTTCCAGGCCCTCTTTaGTGCAGCACTCAGCAGTGCCCTGGTGTCATAGCA +
Preference number: 6 (lower is better)
Translates to: EQPCRAFVPGPL*CSTQQCPGVIA
Trigger: TGCTATGACACCAGGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAACGAAAGCTCTGCATGGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503472.5
CDS CAA 72 bp AGAGCAGCCATGCAGAGCTTTCGTTCCAGGCCCTCTTaGGTGCAGCACTCAGCAGTGCCCTGGTGTCATAGC +
Preference number: 6 (lower is better)
Translates to: RAAMQSFRSRPS*VQHSAVPWCHS
Trigger: GCTATGACACCAGGGCACTGCTGAGTGCTGCACCAAAGAGGGCCTGGAACGAAAGCTCTGCATGGCTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503472.5
CDS TCA 72 bp AGGCCCTCTTTGGTGCAGCACTCAGCAGTGCCTGGGTaGACGGGGAATGGAGAATTACTTTCACAGGACTTG +
Preference number: 6 (lower is better)
Translates to: RPSLVQHSAVPG*TGNGELLSQDL
Trigger: CAAGTCCTGTGAAAGTAATTCTCCATTCCCCGTTCACCCAGGCACTGCTGAGTGCTGCACCAAAGAGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273951.13
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS CCA 72 bp CAACTCTACATCTGGAAGCTCGGGGAGTTGGGCAGCTaGCATGAAGTAAGTGCACACAAAAACGTCCATGGC +
Preference number: 6 (lower is better)
Translates to: QLYIWKLGELGS*HEVSAHKNVHG
Trigger: GCCATGGACGTTTTTGTGTGCACTTACTTCATGCCAGCTGCCCAACTCCCCGAGCTTCCAGATGTAGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS CAA 90 bp CACATCTTTGTTTGTGGGCAACTCTACATCTGGAAGCTCGGGGAGTaGGGCAGCTGGCATGAAGTAAGTGCACACAAAAACGTCCATGGC +
Preference number: 6 (lower is better)
Translates to: HIFVCGQLYIWKLGE*GSWHEVSAHKNVHG
Trigger: GCCATGGACGTTTTTGTGTGCACTTACTTCATGCCAGCTGCCCAACTCCCCGAGCTTCCAGATGTAGAGTTGCCCACAAACAAAGATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS GCA 72 bp TACCAGGACCCTCTTCATTTTTCTACCAGAGAGTCTTaGAGCACCTCCTCTCTCCTCACTCCAAGACCACAG +
Preference number: 6 (lower is better)
Translates to: YQDPLHFSTRES*STSSLLTPRPQ
Trigger: CTGTGGTCTTGGAGTGAGGAGAGAGGAGGTGCTGCAAGACTCTCTGGTAGAAAAATGAAGAGGGTCCTGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504199.5
CDS CCA 72 bp ATCATTTGTGGGTTCCACGTAGGTAGGGAATTCCTGTaGCTGGTGTTTCAGAGCAGCCATGCAGAGCTTTCG +
Preference number: 6 (lower is better)
Translates to: IICGFHVGREFL*LVFQSSHAELS
Trigger: CGAAAGCTCTGCATGGCTGCTCTGAAACACCAGCCACAGGAATTCCCTACCTACGTGGAACCCACAAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS CAA 72 bp GTTTGTGGGCAACTCTACATCTGGAAGCTCGGGGAGTaGGGCAGCTGGCATGAAGTAAGTGCACACAAAAAC +
Preference number: 6 (lower is better)
Translates to: VCGQLYIWKLGE*GSWHEVSAHKN
Trigger: GTTTTTGTGTGCACTTACTTCATGCCAGCTGCCCAACTCCCCGAGCTTCCAGATGTAGAGTTGCCCACAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS CAA 90 bp AGGGCCTTATCCATGACTTTGGTGTTTCCTGGATCACACACATCTTaGTTTGTGGGCAACTCTACATCTGGAAGCTCGGGGAGTTGGGCA +
Preference number: 6 (lower is better)
Translates to: RALSMTLVFPGSHTS*FVGNSTSGSSGSWA
Trigger: TGCCCAACTCCCCGAGCTTCCAGATGTAGAGTTGCCCACAAACAAAGATGTGTGTGATCCAGGAAACACCAAAGTCATGGATAAGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS CCA 72 bp ATCACACACATCTTTGTTTGTGGGCAACTCTACATCTaGAAGCTCGGGGAGTTGGGCAGCTGGCATGAAGTA +
Preference number: 6 (lower is better)
Translates to: ITHIFVCGQLYI*KLGELGSWHEV
Trigger: TACTTCATGCCAGCTGCCCAACTCCCCGAGCTTCCAGATGTAGAGTTGCCCACAAACAAAGATGTGTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS CAA 90 bp TTCCGCACAGCAGGCTTCGGTCAAGGAGACAACTTCCTTCACAAGTaGGCTGACCTGTTCAAACGTGCCACTGGGAAATTTTCTACTGTA +
Preference number: 6 (lower is better)
Translates to: FRTAGFGQGDNFLHK*ADLFKRATGKFSTV
Trigger: TACAGTAGAAAATTTCCCAGTGGCACGTTTGAACAGGTCAGCCAACTTGTGAAGGAAGTTGTCTCCTTGACCGAAGCCTGCTGTGCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS CAA 72 bp TCCATGACTTTGGTGTTTCCTGGATCACACACATCTTaGTTTGTGGGCAACTCTACATCTGGAAGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: SMTLVFPGSHTS*FVGNSTSGSSG
Trigger: CCCCGAGCTTCCAGATGTAGAGTTGCCCACAAACAAAGATGTGTGTGATCCAGGAAACACCAAAGTCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS CAA 90 bp GGCAGCTCTTTGGCCATGCAATCTTCAGAGGCAGACTCACAGCATTaGGAGAGGATGTTAGTAATATCTTCAGCTAGTGGCAAAACATCC +
Preference number: 6 (lower is better)
Translates to: GSSLAMQSSEADSQH*ERMLVISSASGKTS
Trigger: GGATGTTTTGCCACTAGCTGAAGATATTACTAACATCCTCTCCAAATGCTGTGAGTCTGCCTCTGAAGATTGCATGGCCAAAGAGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS CAA 90 bp GTATACTTATCCATGACTTTGGTGTTTCCTGGATCACACACATCTTaGTTTGTGGGCAACTCTACATCTGGAAGCTCGGGGAGTTGGGCA +
Preference number: 6 (lower is better)
Translates to: VYLSMTLVFPGSHTS*FVGNSTSGSSGSWA
Trigger: TGCCCAACTCCCCGAGCTTCCAGATGTAGAGTTGCCCACAAACAAAGATGTGTGTGATCCAGGAAACACCAAAGTCATGGATAAGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000513476.5
CDS TCA 72 bp CTTCGGTCAAGGAGACAACTTCCTTCACAAGTTGGCTaGCCTGTTCAAACGTGCCACTGGGAAATTTTCTAC +
Preference number: 6 (lower is better)
Translates to: LRSRRQLPSQVG*PVQTCHWEIFY
Trigger: GTAGAAAATTTCCCAGTGGCACGTTTGAACAGGTCAGCCAACTTGTGAAGGAAGTTGTCTCCTTGACCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000505234.1
ENST00000506245.1
ENST00000509740.5
ENST00000513476.5
CDS TCA 72 bp CACCAAGGCTTTTTAGGGTTGGCTCAAGTACCTTACTaGGGAATACTTCCGGAAGATGAGTCCTTCTGCTTA +
Preference number: 6 (lower is better)
Translates to: HQGFLGLAQVPY*GILPEDESFCL
Trigger: TAAGCAGAAGGACTCATCTTCCGGAAGTATTCCTCAGTAAGGTACTTGAGCCAACCCTAAAAAGCCTTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000513476.5
CDS GCA 72 bp CTGGAGTCTCTCTTTCAAAAAGCATACAGTTGGGCTTaGAGAGGTACAGCAGGACCCTACCATAGAAAGATA +
Preference number: 6 (lower is better)
Translates to: LESLFQKAYSWA*RGTAGPYHRKI
Trigger: TATCTTTCTATGGTAGGGTCCTGCTGTACCTCTGCAAGCCCAACTGTATGCTTTTTGAAAGAGAGACTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS CCA 72 bp TTTAAGCTGGAGTCTCTCTTTCAAAAAGCATACAGTTaGGCTTGCAGAGGTACAGCAGGACCCTACCATAGA +
Preference number: 6 (lower is better)
Translates to: FKLESLFQKAYS*ACRGTAGPYHR
Trigger: TCTATGGTAGGGTCCTGCTGTACCTCTGCAAGCCCAACTGTATGCTTTTTGAAAGAGAGACTCCAGCTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS CCA 72 bp TGGTCTCTGAATCACAGTAAAGAGGAGGTGAGTTTATaGAACAGCAGTTGGAGGCAAAGTCTGAGTGCTTGT +
Preference number: 6 (lower is better)
Translates to: WSLNHSKEEVSL*NSSWRQSLSAC
Trigger: ACAAGCACTCAGACTTTGCCTCCAACTGCTGTTCCATAAACTCACCTCCTCTTTACTGTGATTCAGAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513476.5
CDS CAA 72 bp TTGGCCATGCAATCTTCAGAGGCAGACTCACAGCATTaGGAGAGGATGTTAGTAATATCTTCAGCTAGTGGC +
Preference number: 6 (lower is better)
Translates to: LAMQSSEADSQH*ERMLVISSASG
Trigger: GCCACTAGCTGAAGATATTACTAACATCCTCTCCAAATGCTGTGAGTCTGCCTCTGAAGATTGCATGGCCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS CAA 72 bp GTACCAGGACCCTCTTCATTTTTCTACCAGAGAGTCTaGCAGCACCTCCTCTCTCTTCTGTATCCCTTTTAT +
Preference number: 6 (lower is better)
Translates to: VPGPSSFFYQRV*QHLLSLLYPFY
Trigger: ATAAAAGGGATACAGAAGAGAGAGGAGGTGCTGCAAGACTCTCTGGTAGAAAAATGAAGAGGGTCCTGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506245.1
CDS CCA 72 bp GGCAAAACATCCTCCAGATCAGCAGTAGGCACTTTTTaGGCTAACTTTATGAGATTGCTGAGCCTTGATTTC +
Preference number: 6 (lower is better)
Translates to: GKTSSRSAVGTF*ANFMRLLSLDF
Trigger: GAAATCAAGGCTCAGCAATCTCATAAAGTTAGCCCAAAAAGTGCCTACTGCTGATCTGGAGGATGTTTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000509740.5
ENST00000513476.5
CDS TCA 72 bp CTGAATAATCTGCACATAGTTCTTGTCCCTTGTCAATaGAAGAAGATAGTTCCTTCTTTAGTAGAGGGCCCT +
Preference number: 6 (lower is better)
Translates to: LNNLHIVLVPCQ*KKIVPSLVEGP
Trigger: AGGGCCCTCTACTAAAGAAGGAACTATCTTCTTTCATTGACAAGGGACAAGAACTATGTGCAGATTATTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000513476.5
CDS TCA 72 bp CTGAATAATCTGCACATAGTTCTTGTCCCTTGTCAATaGAAGAAGATAGTTCCTTCTTTAGTAGAGGGCCTT +
Preference number: 6 (lower is better)
Translates to: LNNLHIVLVPCQ*KKIVPSLVEGL
Trigger: AAGGCCCTCTACTAAAGAAGGAACTATCTTCTTTCATTGACAAGGGACAAGAACTATGTGCAGATTATTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509740.5
CDS CCA 72 bp GGAATATTCCCACATAAATTGATTAGCATATTCCTTTaGATCTTTCCTGAACGCCTCACAGATTTCATCATT +
Preference number: 6 (lower is better)
Translates to: GIFPHKLISIFL*IFPERLTDFII
Trigger: AATGATGAAATCTGTGAGGCGTTCAGGAAAGATCCAAAGGAATATGCTAATCAATTTATGTGGGAATATTCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273951.13
ENST00000503472.5
ENST00000504199.5
ENST00000505234.1
ENST00000509740.5
ENST00000513476.5