Pregenerated sensors for GBE1 (Homo sapiens)
Ensembl gene IDs: ENSG00000114480Ensembl transcript IDs: ENST00000429644.7, ENST00000477426.1, ENST00000484687.1, ENST00000486920.1, ENST00000489715.1, ENST00000498468.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAAGTAGCCGAGGCCCGAGAGGTCGAGTGGGGCCTGAGCGGGCGCTaGAGCTCTAGCTGGGACGCGGCGGCTAGGGCGGAGCCGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: QVAEAREVEWGLSGR*SSSWDAAARAEPEG Trigger: GCCCTCCGGCTCCGCCCTAGCCGCCGCGTCCCAGCTAGAGCTCCAGCGCCCGCTCAGGCCCCACTCGACCTCTCGGGCCTCGGCTACTTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429644.7 |
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| CDS TCA 90 bp | TCTCCAGGAGTCTGGCCAGTTCGGGCACGTCAGCCAGGGCGGCATTaGGCGCCGCCTCGTAGTCCTCGGGCCGAGCCGCGGGAGTCATCG | + |
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Preference number: 5 (lower is better) Translates to: SPGVWPVRARQPGRH*APPRSPRAEPRESS Trigger: CGATGACTCCCGCGGCTCGGCCCGAGGACTACGAGGCGGCGCTCAATGCCGCCCTGGCTGACGTGCCCGAACTGGCCAGACTCCTGGAGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429644.7 |
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| CDS CCA 90 bp | CCATATTCCGCCGCAGTCCAAGTAGCCGAGGCCCGAGAGGTCGAGTaGGGCCTGAGCGGGCGCTGGAGCTCTAGCTGGGACGCGGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: PYSAAVQVAEAREVE*GLSGRWSSSWDAAA Trigger: AGCCGCCGCGTCCCAGCTAGAGCTCCAGCGCCCGCTCAGGCCCCACTCGACCTCTCGGGCCTCGGCTACTTGGACTGCGGCGGAATATGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429644.7 |
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| CDS GCA 90 bp | GGACAGTCATATTCACTGGTAACAAAAAGGATATTTCCCTGGCAATaGTGTTCCAACTCGGTAGTCAGTGTAGCTCTTGCTTGGATGGAA | + |
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Preference number: 5 (lower is better) Translates to: GQSYSLVTKRIFPWQ*CSNSVVSVALAWME Trigger: TTCCATCCAAGCAAGAGCTACACTGACTACCGAGTTGGAACAGCATTGCCAGGGAAATATCCTTTTTGTTACCAGTGAATATGACTGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484687.1 |
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| CDS CCA 90 bp | GAATGTGGACAGTCATATTCACTGGTAACAAAAAGGATATTTCCCTaGCAATGCTGTTCCAACTCGGTAGTCAGTGTAGCTCTTGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: ECGQSYSLVTKRIFP*QCCSNSVVSVALAW Trigger: CCAAGCAAGAGCTACACTGACTACCGAGTTGGAACAGCATTGCCAGGGAAATATCCTTTTTGTTACCAGTGAATATGACTGTCCACATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484687.1 |
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| CDS CCA 90 bp | AATGAGTCGAATCATTTTATGAAGCTGTATTCCACGATCAATAACTaGAGTAAAAGGAGTCAGGACACTCATGTTTGTATACATTTCGGC | + |
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Preference number: 5 (lower is better) Translates to: NESNHFMKLYSTINN*SKRSQDTHVCIHFG Trigger: GCCGAAATGTATACAAACATGAGTGTCCTGACTCCTTTTACTCCAGTTATTGATCGTGGAATACAGCTTCATAAAATGATTCGACTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429644.7 ENST00000489715.1 |
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| CDS CCA 72 bp | GTCGAGTGGGGCCTGAGCGGGCGCTGGAGCTCTAGCTaGGACGCGGCGGCTAGGGCGGAGCCGGAGGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: VEWGLSGRWSSS*DAAARAEPEGA Trigger: GGCGCCCTCCGGCTCCGCCCTAGCCGCCGCGTCCCAGCTAGAGCTCCAGCGCCCGCTCAGGCCCCACTCGAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429644.7 |
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| CDS CCA 72 bp | GAGGCCCGAGAGGTCGAGTGGGGCCTGAGCGGGCGCTaGAGCTCTAGCTGGGACGCGGCGGCTAGGGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: EAREVEWGLSGR*SSSWDAAARAE Trigger: CTCCGCCCTAGCCGCCGCGTCCCAGCTAGAGCTCCAGCGCCCGCTCAGGCCCCACTCGACCTCTCGGGCCTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429644.7 |
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| CDS TCA 72 bp | GTCTGGCCAGTTCGGGCACGTCAGCCAGGGCGGCATTaGGCGCCGCCTCGTAGTCCTCGGGCCGAGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: VWPVRARQPGRH*APPRSPRAEPR Trigger: CCGCGGCTCGGCCCGAGGACTACGAGGCGGCGCTCAATGCCGCCCTGGCTGACGTGCCCGAACTGGCCAGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429644.7 |
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| CDS CCA 72 bp | GCCGCAGTCCAAGTAGCCGAGGCCCGAGAGGTCGAGTaGGGCCTGAGCGGGCGCTGGAGCTCTAGCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: AAVQVAEAREVE*GLSGRWSSSWD Trigger: GTCCCAGCTAGAGCTCCAGCGCCCGCTCAGGCCCCACTCGACCTCTCGGGCCTCGGCTACTTGGACTGCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429644.7 |
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| CDS CAA 90 bp | AGCCTCTGCTATTATCTCAGAAGACTTCATTTATTGTCTTCTGTATaGGTGGATGTGGGGACCTGGAGAGCAGGGCTCCATAGTGAAACC | + |
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Preference number: 6 (lower is better) Translates to: SLCYYLRRLHLLSSV*VDVGTWRAGLHSET Trigger: GGTTTCACTATGGAGCCCTGCTCTCCAGGTCCCCACATCCACCAATACAGAAGACAATAAATGAAGTCTTCTGAGATAATAGCAGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484687.1 |
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| CDS TCA 72 bp | CGGGACACAGCGTGTGAACCAAATGATTTGCCAACATaGGGTAAGTCAAGGCATCTTCATCTACTTGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: RDTACEPNDLPT*GKSRHLHLLVV Trigger: GACTACAAGTAGATGAAGATGCCTTGACTTACCTCATGTTGGCAAATCATTTGGTTCACACGCTGTGTCCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429644.7 ENST00000489715.1 |
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| CDS TCA 72 bp | TTGAAGCATGGCTGTGTACCACATCTAAGAGGACTATaGTACCCATGGAATGAGCTGTGTCTACCAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LKHGCVPHLRGL*YPWNELCLPVL Trigger: AAGAACTGGTAGACACAGCTCATTCCATGGGTATCATAGTCCTCTTAGATGTGGTACACAGCCATGCTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429644.7 ENST00000489715.1 ENST00000498468.1 |
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| CDS TCA 72 bp | TGTCCCGAGTTCTGGAAGTTCTTTAATTTGGATCCATaGGGCACGAGTACAGATTTATTCTGCTTTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: CPEFWKFFNLDP*GTSTDLFCFGG Trigger: CCCACCAAAGCAGAATAAATCTGTACTCGTGCCTCATGGATCCAAATTAAAGAACTTCCAGAACTCGGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477426.1 |
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| CDS CCA 72 bp | GGATCCATGAGGCACGAGTACAGATTTATTCTGCTTTaGTGGGATATACAGCTCCCATTTTCCATAATCCAG | + |
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Preference number: 6 (lower is better) Translates to: GSMRHEYRFILL*WDIQLPFSIIQ Trigger: CTGGATTATGGAAAATGGGAGCTGTATATCCCACCAAAGCAGAATAAATCTGTACTCGTGCCTCATGGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429644.7 ENST00000477426.1 ENST00000489715.1 |
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| CDS GCA 72 bp | TATTCACTGGTAACAAAAAGGATATTTCCCTGGCAATaGTGTTCCAACTCGGTAGTCAGTGTAGCTCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: YSLVTKRIFPWQ*CSNSVVSVALA Trigger: AGCAAGAGCTACACTGACTACCGAGTTGGAACAGCATTGCCAGGGAAATATCCTTTTTGTTACCAGTGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484687.1 |
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| CDS CCA 72 bp | CAGTCATATTCACTGGTAACAAAAAGGATATTTCCCTaGCAATGCTGTTCCAACTCGGTAGTCAGTGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: QSYSLVTKRIFP*QCCSNSVVSVA Trigger: AGCTACACTGACTACCGAGTTGGAACAGCATTGCCAGGGAAATATCCTTTTTGTTACCAGTGAATATGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484687.1 |
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| CDS CAA 72 bp | TGGATCCATGAGGCACGAGTACAGATTTATTCTGCTTaGGTGGGATATACAGCTCCCATTTTCCATAATCCA | + |
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Preference number: 6 (lower is better) Translates to: WIHEARVQIYSA*VGYTAPIFHNP Trigger: TGGATTATGGAAAATGGGAGCTGTATATCCCACCAAAGCAGAATAAATCTGTACTCGTGCCTCATGGATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429644.7 ENST00000477426.1 ENST00000489715.1 |
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| CDS CAA 72 bp | CATAATTCACATTATCACCTTCACGAACCACATACTTaGCCCACGGTGAAATACGATACAAGATCTCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: HNSHYHLHEPHT*PTVKYDTRSLR Trigger: GCGGAGAGATCTTGTATCGTATTTCACCGTGGGCAAAGTATGTGGTTCGTGAAGGTGATAATGTGAATTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429644.7 ENST00000486920.1 ENST00000489715.1 |
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| CDS TCA 72 bp | ATTATCACCTTCACGAACCACATACTTTGCCCACGGTaGAATACGATACAAGATCTCTCCGCTTTTACTAGT | + |
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Preference number: 6 (lower is better) Translates to: IITFTNHILCPR*NTIQDLSAFTS Trigger: ACTAGTAAAAGCGGAGAGATCTTGTATCGTATTTCACCGTGGGCAAAGTATGTGGTTCGTGAAGGTGATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429644.7 ENST00000486920.1 ENST00000489715.1 |
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| CDS CCA 72 bp | GAAGAAGGTCGTCGTCAGTTAAATGAAACTGCCGCCTaGCATAATGGTAACTCTCATTATTTCCTTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: EEGRRQLNETAA*HNGNSHYFLFL Trigger: CAAGAAAAGGAAATAATGAGAGTTACCATTATGCCAGGCGGCAGTTTCATTTAACTGACGACGACCTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429644.7 ENST00000484687.1 ENST00000489715.1 |
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| CDS CAA 72 bp | TTCTACCAATCAGATGAGATGATGGCCACAGAGTATTaGCCAGCTGTTAATCCTTTAATAGCTGAGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: FYQSDEMMATEY*PAVNPLIAELS Trigger: GGACAACTCAGCTATTAAAGGATTAACAGCTGGCAAATACTCTGTGGCCATCATCTCATCTGATTGGTAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477426.1 |
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| CDS TCA 72 bp | CCACCAAGCCCATGCGTAATGAGTCGAATCATTTTATaGAGCTGTATTCCACGATCAATAACTGGAGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: PPSPCVMSRIIL*SCIPRSITGVK Trigger: TTTTACTCCAGTTATTGATCGTGGAATACAGCTTCATAAAATGATTCGACTCATTACGCATGGGCTTGGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429644.7 ENST00000489715.1 |
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| CDS GCA 72 bp | CAGGAACATAATTCTATCAATGTTGGTTTTCTCATCTaGTGTTACTATATCATCCTTAAAGTAACTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: QEHNSINVGFLI*CYYIILKVTSS Trigger: GCTGGAAGTTACTTTAAGGATGATATAGTAACAGCAGATGAGAAAACCAACATTGATAGAATTATGTTCCTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486920.1 |
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| CDS CCA 72 bp | AATCATTTTATGAAGCTGTATTCCACGATCAATAACTaGAGTAAAAGGAGTCAGGACACTCATGTTTGTATA | + |
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Preference number: 6 (lower is better) Translates to: NHFMKLYSTINN*SKRSQDTHVCI Trigger: TATACAAACATGAGTGTCCTGACTCCTTTTACTCCAGTTATTGATCGTGGAATACAGCTTCATAAAATGATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429644.7 ENST00000489715.1 |
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