RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GBA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000070610

Ensembl transcript IDs: ENST00000378088.1, ENST00000378094.4, ENST00000378103.7, ENST00000467252.5, ENST00000485259.1, ENST00000486797.1, ENST00000488292.1, ENST00000489025.1

Found 425 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCGGAACACTCGCTGCTaGCAGTATGCCTCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSRNTRC*QYASGV
Trigger: GACCCCAGAGGCATACTGCCAGCAGCGAGTGTTCCG...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
3UTR-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCCTGAAGGCAGGAGCTaGAATGCATACCAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGPEGRS*NAYQGK
Trigger: TTTTCCCTGGTATGCATTCCAGCTCCTGCCTTCAGG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378088.1
3UTR-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTAGGCAGGAGCTGGAATaGATACCAGGGAAAAATGGG +
Preference number: 2 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGRQELE*IPGKNG
Trigger: CCCATTTTTCCCTGGTATGCATTCCAGCTCCTGCCT...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378088.1
3UTR-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGAGCGGAACACTCGCTaGTGGCAGTATGCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLERNTR*WQYASG
Trigger: CCCAGAGGCATACTGCCAGCAGCGAGTGTTCCGCTC...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
3UTR-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTATGCCTCTGGGGTCTaGAAGGCCAGACCCAGGCGC +
Preference number: 2 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINYASGV*KARPRR
Trigger: GCGCCTGGGTCTGGCCTTCCAGACCCCAGAGGCATA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
3UTR-3UTR CCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTCAGACGGCTCACTCTaGGCTCAGGTTTGCCATGGC +
Preference number: 2 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLSDGSL*AQVCHG
Trigger: GCCATGGCAAACCTGAGCCCAGAGTGAGCCGTCTGA...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
3UTR-3UTR CCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTGCCATGGCTTCCTTTaGTCCAAACATAGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLCHGFL*SKHRPC
Trigger: ACAGGGCCTATGTTTGGACCAAAGGAAGCCATGGCA...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
3UTR-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACACTGGCACAATTGGGTaGAGAGAAGGGAAGGGGTAT +
Preference number: 2 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINTGTIG*REGKGY
Trigger: ATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGT...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
3UTR-3UTR CCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGATTTACTGGCACAATTaGGTGGAGAGAAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLIYWHN*VERREG
Trigger: CCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAAT...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
3UTR CCA 72 bp CGGAACACTCGCTGCTGGCAGTATGCCTCTGGGGTCTaGAAGGCCAGACCCAGGCGCTCCCACACGGTACGG +
Preference number: 3 (lower is better)
Translates to: RNTRCWQYASGV*KARPRRSHTVR
Trigger: CCGTACCGTGTGGGAGCGCCTGGGTCTGGCCTTCCAGACCCCAGAGGCATACTGCCAGCAGCGAGTGTTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
3UTR-3UTR CAA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTCCAAGTCAGGCCCTGTaGGGAGAGATGACAGTCATA +
Preference number: 3 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGPSQAL*GEMTVI
Trigger: TATGACTGTCATCTCTCCCAACAGGGCCTGACTTGG...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
3UTR-3UTR CAA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCCAAGTCAGGCCCTGTaGGGAGAGATGACAGTCATA +
Preference number: 3 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINPSQAL*GEMTVI
Trigger: TATGACTGTCATCTCTCCCAACAGGGCCTGACTTGG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR CCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCCCAGGTGCCAGCCCGTaGGAAGGTGACCCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALPGASP*EGDPGR
Trigger: GCGCCCAGGGTCACCTTCCCACGGGCTGGCACCTGG...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR TCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCCCTGGGCGCCGGGATaGCCCGAGCCCTTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGPWAPG*PEPFPV
Trigger: GACCGGAAAGGGCTCGGGTCATCCCGGCGCCCAGGG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378103.7
CDS-3UTR TCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCGATCCTGGGTCCCCATaGCCTCGATGGCGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALDPGSP*PRWRQV
Trigger: GACTTGGCGCCATCGAGGTCATGGGGACCCAGGATC...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR TCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCAGGGTGGGGCGGAGGTaGCACATGTTTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSRVGRR*HMFLPS
Trigger: GCTGGGCAGAAACATGTGTCACCTCCGCCCCACCCT...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR GCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCGGGACACCATGGGGCTaGATCCCATTCACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSGTPWG*IPFTAP
Trigger: GGGGGCTGTGAATGGGATGCAGCCCCATGGTGTCCC...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR TCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCCGGGCTCTGCCAAGCTaGGATCCTCTCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALRALPS*DPLFPL
Trigger: GAGTGGGAAGAGAGGATCTCAGCTTGGCAGAGCCCG...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR GCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCTCGCTGCTGGCAGTATaGCTCTGGGGTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALSLLAV*LWGLEG
Trigger: GCCTTCCAGACCCCAGAGGCATACTGCCAGCAGCGA...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR GCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCTTGGCACAGCTTATCTaGTCCGAGGCTGGGACGCCG +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALLAQLI*SEAGTP
Trigger: CGGCGTCCCAGCCTCGGAGCAGATAAGCTGTGCCAA...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR GCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCACACCTGCTGCCCCGTaGTGTCAGGGTCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALTPAAP*CQGQRL
Trigger: CAGCCTTTGACCCTGACAGCACGGGGCAGCAGGTGT...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR GCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCAGCTGCCGTGACTCGTaGAGCCACAGCCATCGTGTA +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALSCRDS*SHSHRV
Trigger: TACACGATGGCTGTGGCTGCACGAGTCACGGCAGCT...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR CCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCTCAGACGGCTCACTCTaGGCTCAGGTTTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSSDGSL*AQVCHG
Trigger: GCCATGGCAAACCTGAGCCCAGAGTGAGCCGTCTGA...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCGGCCAAAGGGCGACTaGGCCCGCAGAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRRPKGD*ARREGR
Trigger: CCTCCCCTCTCTGCGGGCCCAGTCGCCCTTTGGCCG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCATTCCACAAACCCCCTaGGGCATCGTCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSIPQTP*GIVSTT
Trigger: GGTGGTGGAGACGATGCCCCAGGGGGTTTGTGGAAT...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR CCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCGGGTGCTTTGGCCAGTaGGAGAGTCCAGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALGCFGQ*ESPAVH
Trigger: ATGGACAGCTGGACTCTCCCACTGGCCAAAGCACCC...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR TCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCAAGATGGGTGTGATCTaGCGGCAGGTGAGGGTGACA +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALKMGVI*RQVRVT
Trigger: TGTCACCCTCACCTGCCGTCAGATCACACCCATCTT...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR TCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCCCACAGACAGAAGCCTaGAGGCAGGAGCTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALPQTEA*RQELLD
Trigger: ATCCAAGAGCTCCTGCCTTCAGGCTTCTGTCTGTGG...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR GCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCATCCTGGATGTCCTGTaGCCCACACAGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALILDVL*PTQSSH
Trigger: ATGGCTGCTCTGTGTGGGGCACAGGACATCCAGGAT...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTGAGCCGGGGAGCTCTTaGTTCAGTGGGGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGEPGSS*FSGGGD
Trigger: GTCGCCGCCCCCACTGAAGCAAGAGCTCCCCGGCTC...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCGGTGACACATGTTTCTaGCCAGCTCCTCTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALGDTCF*PAPLVG
Trigger: CCCTACCAGAGGAGCTGGGCAGAAACATGTGTCACC...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR CCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCATGTTCCCTGGATCCTaGGTCCCCATGACCTCGATG +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSMFPGS*VPMTSM
Trigger: CATCGAGGTCATGGGGACCCAGGATCCAGGGAACAT...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR TCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGAGGGTGGGGCGGAGGTaGCACATGTTTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGRVGRR*HMFLPS
Trigger: GCTGGGCAGAAACATGTGTCACCTCCGCCCCACCCT...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCTGTTGCAGGGCTAGCTaGATGGCCCATATGCTCAGT +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSCCRAS*MAHMLS
Trigger: ACTGAGCATATGGGCCATGCAGCTAGCCCTGCAACA...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR GCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCCAGAGTCCTCCGGATTaGAGCAGTCCGTCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALQSPPD*SSPSLL
Trigger: CAAAAGAGACGGACTGCTGCAATCCGGAGGACTCTG...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR GCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGAGATCCTGCCACACCTaGTGCCCCGTGCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGRSCHT*CPVLSG
Trigger: CCCTGACAGCACGGGGCAGCAGGTGTGGCAGGATCT...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGTGGCTGAGGGCAGGTaGTGCATCTCCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGVAEGR*CISILA
Trigger: GGCCAGGATGGAGATGCAGCACCTGCCCTCAGCCAC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTGCTGCGGAGGACACTTaGGCGCTCCAGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGAAEDT*ALQGQD
Trigger: GTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGC...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCTCAAAGGCTGTGATGTaGGTTACCGTGGTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSSKAVM*VTVVAA
Trigger: GGCAGCTACCACGGTAACCCACATCACAGCCTTTGA...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR GCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGAGCGGAACACTCGCTaGTGGCAGTATGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGERNTR*WQYASG
Trigger: CCCAGAGGCATACTGCCAGCAGCGAGTGTTCCGCTC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCCTGCACATCCTTGGTaGCGCCAGTCTCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGPAHPW*RQSLQG
Trigger: GCCCTGAAGAGACTGGCGGCACCAAGGATGTGCAGG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCTTACAGTCTGTAACCTaGACATCCTTGGTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSLQSVT*TSLVPP
Trigger: TGGCGGCACCAAGGATGTGCAGGTTACAGACTGTAA...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTTCCTGCCACACCTGCTaGCCCGTGCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGSCHTC*PVLSGS
Trigger: TGACCCTGACAGCACGGGGCAGCAGGTGTGGCAGGA...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCCCTGAAGGCAGGAGCTaGAATGCATACCAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALPEGRS*NAYQGK
Trigger: TTTTCCCTGGTATGCATTCCAGCTCCTGCCTTCAGG...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTTATGCCTCTGGGGTCTaGAAGGCCAGACCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGYASGV*KARPRR
Trigger: GCGCCTGGGTCTGGCCTTCCAGACCCCAGAGGCATA...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCGGAACACTCGCTGCTaGCAGTATGCCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGRNTRC*QYASGV
Trigger: GACCCCAGAGGCATACTGCCAGCAGCGAGTGTTCCG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCACTGGCACAATTGGGTaGAGAGAAGGGAAGGGGTAT +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALTGTIG*REGKGY
Trigger: ATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGT...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTGTCTCTGTAGGTCCTaGACGGGAAGGGTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGCLCRS*TGRVGP
Trigger: AGGCCCGACCCTTCCCGTCCAGGACCTACAGAGACA...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCTTGTGGATCCTCTTTaGCACAGCTTATCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSLVDPL*HSLSAP
Trigger: CGGAGCAGATAAGCTGTGCCAAAGAGGATCCACAAG...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGCAGTCCGTCTCTTTTaGGGGTCGGCTGTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGAVRLF*GSAVFG
Trigger: CCCGAAGACAGCCGACCCCCAAAAGAGACGGACTGC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCCGCATGTAGGCCAGTaGGCGGAACACTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMPHVGQ*AEHSLL
Trigger: CAGCAGCGAGTGTTCCGCTCACTGGCCTACATGCGG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCGTGTCTGTCACACCATaGATGTACCTGGGGAAATCA +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSVSVTP*MYLGKS
Trigger: TGATTTCCCCAGGTACATTCATGGTGTGACAGACAC...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR TCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGTTTGGAAGGGTTGGATaGTGCAGGAGCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRFGRVG*CRSSPR
Trigger: CCGGGGGCTGCTCCTGCATCATCCAACCCTTCCAAA...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCGGGCTCTGCCAAGCTaGGATCCTCTCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRRALPS*DPLFPL
Trigger: GAGTGGGAAGAGAGGATCTCAGCTTGGCAGAGCCCG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGGGGACACCATGGGGCTaGATCCCATTCACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMGTPWG*IPFTAP
Trigger: GGGGGCTGTGAATGGGATGCAGCCCCATGGTGTCCC...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTTCGCTGCTGGCAGTATaGCTCTGGGGTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGSLLAV*LWGLEG
Trigger: GCCTTCCAGACCCCAGAGGCATACTGCCAGCAGCGA...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTTGCTGGTACACAGTCTaGCCTTCCCGACGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGCWYTV*PSRRRH
Trigger: GTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCA...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTACACCTGCTGCCCCGTaGTGTCAGGGTCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGTPAAP*CQGQRL
Trigger: CAGCCTTTGACCCTGACAGCACGGGGCAGCAGGTGT...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGTCCTGCCACACCTGCTaGCCCGTGCTGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMSCHTC*PVLSGS
Trigger: TGACCCTGACAGCACGGGGCAGCAGGTGTGGCAGGA...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGCTGAGGGCAGGTGCTaGATCTCCATCCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGAEGRC*ISILAK
Trigger: TTTGGCCAGGATGGAGATGCAGCACCTGCCCTCAGC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTGCGTATCGGCACAGTaGATAGTGGCTGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGCVSAQ*IVAEGR
Trigger: CCTGCCCTCAGCCACTATGCACTGTGCCGATACGCA...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TCCCAGCAAGTGGAGGAGATAACTATGACCCACAGACAGAAGCCTGAAGGCAGGCCCTACCCGCTAACCTaGGGCCTGTGGTCACCCATC +
Preference number: 4 (lower is better)
Translates to: SQQVEEITMTHRQKPEGRPYPLT*GLWSPI
Trigger: GATGGGTGACCACAGGCCCCAGGTTAGCGGGTAGGG...CCTGCCTTCAGGCTTCTGTCTGTGGGTCATAGTTATCTCCTCCACTTGCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCCACTGTCCAGCACACTaGTCAGACATAACACTACGA +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALHCPAH*SDITLR
Trigger: TCGTAGTGTTATGTCTGACCAGTGTGCTGGACAGTG...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCTGGCAGTATGCCTCTaGGGTCTGGAAGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRLAVCL*GLEGQT
Trigger: GGTCTGGCCTTCCAGACCCCAGAGGCATACTGCCAG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTCAGACGGCTCACTCTaGGCTCAGGTTTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGSDGSL*AQVCHG
Trigger: GCCATGGCAAACCTGAGCCCAGAGTGAGCCGTCTGA...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCACCATGAATGTACCTaGGGAAATCAACTGACCTCC +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSHHECT*GNQLTS
Trigger: GGAGGTCAGTTGATTTCCCCAGGTACATTCATGGTG...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGTGTCTCTGTAGGTCCTaGACGGGAAGGGTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRCLCRS*TGRVGP
Trigger: AGGCCCGACCCTTCCCGTCCAGGACCTACAGAGACA...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGGTTCCCATGTTCCCTaGATCCTGGGTCCCCATGAC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGGSHVP*ILGPHD
Trigger: GTCATGGGGACCCAGGATCCAGGGAACATGGGAACC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGGCAGTCCGTCTCTTTTaGGGGTCGGCTGTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRAVRLF*GSAVFG
Trigger: CCCGAAGACAGCCGACCCCCAAAAGAGACGGACTGC...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTGCCAACGACAGAACTaGCCTCTCCAGCCACGGGTA +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGCQRQN*PLQPRV
Trigger: TACCCGTGGCTGGAGAGGCCAGTTCTGTCGTTGGCA...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGATTCCACAAACCCCCTaGGGCATCGTCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGIPQTP*GIVSTT
Trigger: GGTGGTGGAGACGATGCCCCAGGGGGTTTGTGGAAT...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGGGGTTTGGAAGGGTTaGATGATGCAGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGGVWKG*MMQEQP
Trigger: GGGCTGCTCCTGCATCATCCAACCCTTCCAAACCCC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGAACTCCAGGCGGCACTaGCCTCGAGGTCGCAACTTG +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRNSRRH*PRGRNL
Trigger: CAAGTTGCGACCTCGAGGCCAGTGCCGCCTGGAGTT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCGTAGTCCCGTAGGGTaGGGCGGAGGTGACACATGT +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRRSPVG*GGGDTC
Trigger: ACATGTGTCACCTCCGCCCCACCCTACGGGACTACG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTACAGTGCATAGTGGCTaGGGGCAGGTGCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGTVHSG*GQVLHL
Trigger: GAGATGCAGCACCTGCCCTCAGCCACTATGCACTGT...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGGTGTCAGGTCCTCCCTaGGAGTGGCCAGAGCCATGT +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMVSGPP*EWPEPC
Trigger: ACATGGCTCTGGCCACTCTCAGGGAGGACCTGACAC...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp ACTATGACCCACAGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGATCGCTGCTGGCAGTATaGCTCTGGGGTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TMTHRQKPEGRSWNAYQGSLLAV*LWGLEG
Trigger: GCCTTCCAGACCCCAGAGGCATACTGCCAGCAGCGA...TCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCTGTGGGTCATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR GCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCCAGCCTATTCCAGATaGGGGCGCCGGTCGTTGTTA +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRPAYSR*GRRSLL
Trigger: TAACAACGACCGGCGCCCGCATCTGGAATAGGCTGG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTCCAGCCTATTCCAGATaGGGGCGCCGGTCGTTGTTA +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGPAYSR*GRRSLL
Trigger: TAACAACGACCGGCGCCCGCATCTGGAATAGGCTGG...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCCTGCACATCCTTGGTaGCGCCAGTCTCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMPAHPW*RQSLQG
Trigger: GCCCTGAAGAGACTGGCGGCACCAAGGATGTGCAGG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTAGCTGCCGTGACTCGTaGAGCCACAGCCATCGTGTA +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGSCRDS*SHSHRV
Trigger: TACACGATGGCTGTGGCTGCACGAGTCACGGCAGCT...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTGCTGAGGGCAGGTGCTaGATCTCCATCCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGAEGRC*ISILAK
Trigger: TTTGGCCAGGATGGAGATGCAGCACCTGCCCTCAGC...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCACAGAGCAGCCATCTaGACCATCACAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGHRAAI*TITATA
Trigger: AGCTGTGGCTGTGATGGTCCAGATGGCTGCTCTGTG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCTCATACATACTAACTTaGCACCCTCTGAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSSYILT*HPLKSH
Trigger: GTGGCTCTTCAGAGGGTGCCAAGTTAGTATGTATGA...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCTGGCAGTATGCCTCTaGGGTCTGGAAGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMLAVCL*GLEGQT
Trigger: GGTCTGGCCTTCCAGACCCCAGAGGCATACTGCCAG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCGGAACACTCGCTGCTaGCAGTATGCCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMRNTRC*QYASGV
Trigger: GACCCCAGAGGCATACTGCCAGCAGCGAGTGTTCCG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGGAGCTCTTGCTTCAGTaGGGGCGGCGACAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRELLLQ*GRRQQR
Trigger: TCTTTGCTGTCGCCGCCCCCACTGAAGCAAGAGCTC...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGAGGGACAGGACTTGCTaGTACACAGTCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGRDRTC*YTVCPS
Trigger: GGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCT...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGATTGACGCGGAGCCATaGTTCATCATCTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGIDAEP*FIIWVP
Trigger: GGGGACCCAGATGATGAACCATGGCTCCGCGTCAAT...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTCTCCACAGTAAGCACTaGGGCCTGTGGTCACCCATC +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGLHSKH*GLWSPI
Trigger: GATGGGTGACCACAGGCCCCAGTGCTTACTGTGGAG...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGAAGGCAGGAGCTCTTaGATCATGGTAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGEGRSS*IMVAAS
Trigger: GCTGGCAGCTACCATGATCCAAGAGCTCCTGCCTTC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR TCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCTCCACAGTAAGCACTaGTCAGGGACATGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGLHSKH*SGTWVW
Trigger: CCAAACCCATGTCCCTGATCAGTGCTTACTGTGGAG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR TCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGAAGATGGGTGTGATCTaGCGGCAGGTGAGGGTGACA +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRKMGVI*RQVRVT
Trigger: TGTCACCCTCACCTGCCGTCAGATCACACCCATCTT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGTCCAGCTGTCCATCCTaGAGTAGATCCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRSSCPS*SRSCHT
Trigger: GGTGTGGCAGGATCTACTTCAGGATGGACAGCTGGA...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp AGGAGCTCCCAGCAAGTGGAGGAGATAACTATGACCCACAGACAGAAGCCTGAAGAGCGGAACACTCGCTaGTGGCAGTATGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSSQQVEEITMTHRQKPEERNTR*WQYASG
Trigger: CCCAGAGGCATACTGCCAGCAGCGAGTGTTCCGCTC...TTCAGGCTTCTGTCTGTGGGTCATAGTTATCTCCTCCACTTGCTGGGAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTTTCCGGTACCACCACTaGAGGTACCTCAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGFRYHH*RYLKPM
Trigger: CATGGGCTTGAGGTACCTGCAGTGGTGGTACCGGAA...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTTCCAGGGACAGGACTTaGTGGTACACAGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGSRDRT*WYTVCP
Trigger: AGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGA...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCTCCTACAGGCAGGCTaGTGTCCTGGTAGTCATGGG +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMLLQAG*CPGSHG
Trigger: CCCATGACTACCAGGACAGCAGCCTGCCTGTAGGAG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTGGTGACACATGTTTCTaGCCAGCTCCTCTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGGDTCF*PAPLVG
Trigger: CCCTACCAGAGGAGCTGGGCAGAAACATGTGTCACC...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCCTCCTTTTCACAGGTaGCATCACCCCACTCATCAG +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGPPFHR*HHPTHQ
Trigger: CTGATGAGTGGGGTGATGGCACCTGTGAAAAGGAGG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACTATGACCCACAGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGATCACCTCAGGCCTCCTaGAAACCCCTACCCGCTAAC +
Preference number: 4 (lower is better)
Translates to: TMTHRQKPEGRSWNAYQGSPQAS*KPLPAN
Trigger: GTTAGCGGGTAGGGGTTTCCAGGAGGCCTGAGGTGA...TCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCTGTGGGTCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGTCAGACGGCTCACTCTaGGCTCAGGTTTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMSDGSL*AQVCHG
Trigger: GCCATGGCAAACCTGAGCCCAGAGTGAGCCGTCTGA...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGGCAAAGAAGCCGCCTTaGGCTCTCCTTCGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRAKKPP*ALLRLS
Trigger: AGACAACCGAAGGAGAGCCCAAGGCGGCTTCTTTGC...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGGAGCTCTTGCTTCAGTaGGGGCGGCGACAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMELLLQ*GRRQQR
Trigger: TCTTTGCTGTCGCCGCCCCCACTGAAGCAAGAGCTC...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGGAGCTGGTGTTTCAGTaGAGCCGGGGAGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMELVFQ*SRGALA
Trigger: AGCAAGAGCTCCCCGGCTCCACTGAAACACCAGCTC...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGAGGGACAGGACTTGCTaGTACACAGTCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRRDRTC*YTVCPS
Trigger: GGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGGGGGTTTGGAAGGGTTaGATGATGCAGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMGVWKG*MMQEQP
Trigger: GGGCTGCTCCTGCATCATCCAACCCTTCCAAACCCC...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTCAAAGGCTGTGATGTaGGTTACCGTGGTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGSKAVM*VTVVAA
Trigger: GGCAGCTACCACGGTAACCCACATCACAGCCTTTGA...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGGGTCCCCAATATCATaGGGGATGACGTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGGSPIS*GMTFLL
Trigger: AAGGAGGAACGTCATCCCCCATGATATTGGGGACCC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTCAAGTCAGGCCCTCTTaGATCATGGTAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGQVRPS*IMVAAS
Trigger: GCTGGCAGCTACCATGATCCAAGAGGGCCTGACTTG...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378103.7
CDS-3UTR GCA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCATCATAGGTCTGGTCTaGATAGCCTCCATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSIIGLV*IASIFN
Trigger: ATTGAAAATGGAGGCTATGCAGACCAGACCTATGAT...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR GCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTTACAGTCTGTAACCTaGACATCCTTGGTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGLQSVT*TSLVPP
Trigger: TGGCGGCACCAAGGATGTGCAGGTTACAGACTGTAA...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGATTCCAGGGTTAAGCTaGCAACGACAGAACTGGCCT +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGIPGLS*QRQNWP
Trigger: AGGCCAGTTCTGTCGTTGGCAGCTTAACCCTGGAAT...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGATGCCTACTCCTTTCTaGGTAGGGGTGCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRMPTPF*VGVLWP
Trigger: TGGCCAAAGCACCCCTACGCAGAAAGGAGTAGGCAT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCTCGAGGTCGCAACTTaGTGGAAACACACACAGCTC +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRLEVAT*WKHTQL
Trigger: GAGCTGTGTGTGTTTCCAGCAAGTTGCGACCTCGAG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTCTCGAGGTCGCAACTTaGTGGAAACACACACAGCTC +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGLEVAT*WKHTQL
Trigger: GAGCTGTGTGTGTTTCCAGCAAGTTGCGACCTCGAG...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCCTCTCTTCCCACTCTaGGTATCGGCACAGTGCATA +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRPLFPL*VSAQCI
Trigger: TATGCACTGTGCCGATACGCAGAGTGGGAAGAGAGG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACTATGACCCACAGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGACTAACCTGGGGCCTGTaGTCACCCATCCATCATAGG +
Preference number: 4 (lower is better)
Translates to: TMTHRQKPEGRSWNAYQGLTWGL*SPIHHR
Trigger: CCTATGATGGATGGGTGACCACAGGCCCCAGGTTAG...TCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCTGTGGGTCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp AGGAGCTCCCAGCAAGTGGAGGAGATAACTATGACCCACAGACAGAAGCCTGAATCAGGGACATGGGTTTaGGGGTCAGACTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RSSQQVEEITMTHRQKPESGTWV*GSDWQL
Trigger: GAGCTGCCAGTCTGACCCCCAAACCCATGTCCCTGA...TTCAGGCTTCTGTCTGTGGGTCATAGTTATCTCCTCCACTTGCTGGGAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGGCACGGACCACATGTTaGGTAGGAAACACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRARTTC*VGNTSV
Trigger: CACTGAGGTGTTTCCTACCCAACATGTGGTCCGTGC...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCCTTGAAGAAATTTGGTaGTTGAGGAAGTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TQALPHGTVAAFSCLEALLEEIW*LRKFSG
Trigger: CCCAGAAAACTTCCTCAACCACCAAATTTCTTCAAG...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp GTAGAGTCTTTGCCTTCAAGGAGCTCCCAGCAAGTGGAGGAGATAACTATGACCCGGAACACTCGCTGCTaGCAGTATGCCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: VESLPSRSSQQVEEITMTRNTRC*QYASGV
Trigger: GACCCCAGAGGCATACTGCCAGCAGCGAGTGTTCCG...GGTCATAGTTATCTCCTCCACTTGCTGGGAGCTCCTTGAAGGCAAAGACTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGCGGCCAAAGGGCGACTaGGCCCGCAGAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLRPKGD*ARREGR
Trigger: CCTCCCCTCTCTGCGGGCCCAGTCGCCCTTTGGCCG...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGGCAAAGAAGCCGCCTTaGGCTCTCCTTCGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMAKKPP*ALLRLS
Trigger: AGACAACCGAAGGAGAGCCCAAGGCGGCTTCTTTGC...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGATGTTCCCTGGATCCTaGGTCCCCATGACCTCGATG +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMMFPGS*VPMTSM
Trigger: CATCGAGGTCATGGGGACCCAGGATCCAGGGAACAT...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGTCTTCTTTTCCACATaGGTCTTCCGGTACCACCAC +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGVFFST*VFRYHH
Trigger: GTGGTGGTACCGGAAGACCCATGTGGAAAAGAAGAC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTAGGCACACTGTGAATTaGTCAGCGATGACTGTCCGG +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGRHTVN*SAMTVR
Trigger: CCGGACAGTCATCGCTGACCAATTCACAGTGTGCCT...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCCATGGTTCATCATCTaGGTCCCCAATATCATGGGG +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGPWFII*VPNIMG
Trigger: CCCCATGATATTGGGGACCCAGATGATGAACCATGG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGAAGCACTGGGGCCTGTaGTCACCCATCCATCATAGG +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMKHWGL*SPIHHR
Trigger: CCTATGATGGATGGGTGACCACAGGCCCCAGTGCTT...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp ACTATGACCCACAGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGAATAACACTACGAGACTaGGGCCGAGAGCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TMTHRQKPEGRSWNAYQGITLRD*GRELLS
Trigger: TGACAGCAGCTCTCGGCCTCAGTCTCGTAGTGTTAT...TCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCTGTGGGTCATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR TCA 90 bp GTAGAGTCTTTGCCTTCAAGGAGCTCCCAGCAAGTGGAGGAGATAACTATGACCCCACAGACAGAAGCCTaGAGGCAGGAGCTGGAATGC +
Preference number: 4 (lower is better)
Translates to: VESLPSRSSQQVEEITMTPQTEA*RQELEC
Trigger: GCATTCCAGCTCCTGCCTTCAGGCTTCTGTCTGTGG...GGTCATAGTTATCTCCTCCACTTGCTGGGAGCTCCTTGAAGGCAAAGACTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR TCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCAATATCATGGGGGATaGCGTTCCTCCTTTTCACAG +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGQYHGG*RSSFSQ
Trigger: CTGTGAAAAGGAGGAACGTCATCCCCCATGATATTG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGAGCCGGGGAGCTCTTaGTTCAGTGGGGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLEPGSS*FSGGGD
Trigger: GTCGCCGCCCCCACTGAAGCAAGAGCTCCCCGGCTC...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGATGCCTACTCCTTTCTaGGTAGGGGTGCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMMPTPF*VGVLWP
Trigger: TGGCCAAAGCACCCCTACGCAGAAAGGAGTAGGCAT...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCCTCCTTTTCACAGGTaGCATCACCCCACTCATCAG +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMPPFHR*HHPTHQ
Trigger: CTGATGAGTGGGGTGATGGCACCTGTGAAAAGGAGG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGGCACGGACCACATGTTaGGTAGGAAACACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMARTTC*VGNTSV
Trigger: CACTGAGGTGTTTCCTACCCAACATGTGGTCCGTGC...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTCCTCCTGCAAAGGCCTaGACGTTCAGCTCAAAGATA +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGPPAKA*TFSSKI
Trigger: TATCTTTGAGCTGAACGTCCAGGCCTTTGCAGGAGG...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCCTCCTGCAAAGGCCTaGACGTTCAGCTCAAAGATA +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRPPAKA*TFSSKI
Trigger: TATCTTTGAGCTGAACGTCCAGGCCTTTGCAGGAGG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGTTATCAGGGACACCATaGGGCTGCATCCCATTCACA +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRLSGTP*GCIPFT
Trigger: TGTGAATGGGATGCAGCCCCATGGTGTCCCTGATAA...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGTGCCATGGCTTCCTTTaGTCCAAACATAGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRCHGFL*SKHRPC
Trigger: ACAGGGCCTATGTTTGGACCAAAGGAAGCCATGGCA...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGACTGGCACAATTGGGTaGAGAGAAGGGAAGGGGTAT +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRTGTIG*REGKGY
Trigger: ATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCCAGGTGCCAGCCCGTaGGAAGGTGACCCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINPGASP*EGDPGR
Trigger: GCGCCCAGGGTCACCTTCCCACGGGCTGGCACCTGG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGGGGTCCCCAATATCATaGGGGATGACGTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMGSPIS*GMTFLL
Trigger: AAGGAGGAACGTCATCCCCCATGATATTGGGGACCC...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCCATGGTTCATCATCTaGGTCCCCAATATCATGGGG +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRPWFII*VPNIMG
Trigger: CCCCATGATATTGGGGACCCAGATGATGAACCATGG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCCCTGTTGGGAGAGATaGCAGTCATACATACTAACT +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGPCWER*QSYILT
Trigger: AGTTAGTATGTATGACTGTCATCTCTCCCAACAGGG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR TCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGGTGTCTGTCACACCATaGATGTACCTGGGGAAATCA +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRVSVTP*MYLGKS
Trigger: TGATTTCCCCAGGTACATTCATGGTGTGACAGACAC...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGTTCTCTGTAAACTCATaGGCCAGACAGATGCGCCAG +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMFSVNS*ARQMRQ
Trigger: CTGGCGCATCTGTCTGGCTCATGAGTTTACAGAGAA...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGATGACTGTCCGGTGCTaGTACATTCCAGGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMMTVRC*YIPGLS
Trigger: GCTTAACCCTGGAATGTATCAGCACCGGACAGTCAT...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTTCCGCATGGAGAACATaGTGGACACATCTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGSAWRT*WTHLEL
Trigger: AAGCTCTAGATGTGTCCATCATGTTCTCCATGCGGA...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGGATTAAATATGCATTaGCGCGGAGCCATGGTTCAT +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGGLNMH*RGAMVH
Trigger: ATGAACCATGGCTCCGCGTCAATGCATATTTAATCC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTACTGAGGCCGAGAGCTaGTGTCATAGTTGTAATAGC +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGTEAES*CHSCNS
Trigger: GCTATTACAACTATGACAGCAGCTCTCGGCCTCAGT...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGACTGAGGCCGAGAGCTaGTGTCATAGTTGTAATAGC +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRTEAES*CHSCNS
Trigger: GCTATTACAACTATGACAGCAGCTCTCGGCCTCAGT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGGCCCCAGTTCCAGCTaGGGAGGACACTTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLGPSSS*GGHLGA
Trigger: AGCGCCCAAGTGTCCTCCGCAGCTGGAACTGGGGCC...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGGAAGAAAACTTATCCTaGATGTCCTGTGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQREENLS*MSCAPH
Trigger: GTGTGGGGCACAGGACATCCAGGATAAGTTTTCTTC...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTGAAGAAAACTTATCCTaGATGTCCTGTGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGEENLS*MSCAPH
Trigger: GTGTGGGGCACAGGACATCCAGGATAAGTTTTCTTC...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCACTGTCCAGCACACTaGTCAGACATAACACTACGA +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRHCPAH*SDITLR
Trigger: TCGTAGTGTTATGTCTGACCAGTGTGCTGGACAGTG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTCACTGTCCAGCACACTaGTCAGACATAACACTACGA +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGHCPAH*SDITLR
Trigger: TCGTAGTGTTATGTCTGACCAGTGTGCTGGACAGTG...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TCCCAGCAAGTGGAGGAGATAACTATGACCCACAGACAGAAGCCTGAAGGCAGGTTATCAGGGACACCATaGGGCTGCATCCCATTCACA +
Preference number: 4 (lower is better)
Translates to: SQQVEEITMTHRQKPEGRLSGTP*GCIPFT
Trigger: TGTGAATGGGATGCAGCCCCATGGTGTCCCTGATAA...CCTGCCTTCAGGCTTCTGTCTGTGGGTCATAGTTATCTCCTCCACTTGCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGTTATCAGGGACACCATaGGGCTGCATCCCATTCACA +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMLSGTP*GCIPFT
Trigger: TGTGAATGGGATGCAGCCCCATGGTGTCCCTGATAA...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACTATGACCCACAGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGAGAGTGCATTACCTCTTaGATCATGGTAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TMTHRQKPEGRSWNAYQGECITS*IMVAAS
Trigger: GCTGGCAGCTACCATGATCCAAGAGGTAATGCACTC...TCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCTGTGGGTCATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGTGCCATGGCTTCCTTTaGTCCAAACATAGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMCHGFL*SKHRPC
Trigger: ACAGGGCCTATGTTTGGACCAAAGGAAGCCATGGCA...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGTCAACCCCCATTTACTaGCACAATTGGGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRSTPIY*HNWVER
Trigger: TCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGA...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTTCAACCCCCATTTACTaGCACAATTGGGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGSTPIY*HNWVER
Trigger: TCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGA...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTAGCCTCCATTTTCAATaGGTCCATCATGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGSLHFQ*VHHGPC
Trigger: ACAAGGACCATGATGGACTCATTGAAAATGGAGGCT...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGAGCCTCCATTTTCAATaGGTCCATCATGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRSLHFQ*VHHGPC
Trigger: ACAAGGACCATGATGGACTCATTGAAAATGGAGGCT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp ACTATGACCCACAGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGAGTGTCTGTCACACCATaGATGTACCTGGGGAAATCA +
Preference number: 4 (lower is better)
Translates to: TMTHRQKPEGRSWNAYQGVSVTP*MYLGKS
Trigger: TGATTTCCCCAGGTACATTCATGGTGTGACAGACAC...TCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCTGTGGGTCATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR TCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGTCCGCATGGAGAACATaGTGGACACATCTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMSAWRT*WTHLEL
Trigger: AAGCTCTAGATGTGTCCATCATGTTCTCCATGCGGA...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCAATATCATGGGGGATaGCGTTCCTCCTTTTCACAG +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMQYHGG*RSSFSQ
Trigger: CTGTGAAAAGGAGGAACGTCATCCCCCATGATATTG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp AGGAGCTCCCAGCAAGTGGAGGAGATAACTATGACCCACAGACAGAAGCCTGAACCTACAATCCCTTGTTaGCCAGTTTCTCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: RSSQQVEEITMTHRQKPEPTIPC*PVSHLR
Trigger: CCTGAGGTGAGAAACTGGGCAACAAGGGATTGTAGG...TTCAGGCTTCTGTCTGTGGGTCATAGTTATCTCCTCCACTTGCTGGGAGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR GCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGACTGAGGCCGAGAGCTaGTGTCATAGTTGTAATAGC +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMTEAES*CHSCNS
Trigger: GCTATTACAACTATGACAGCAGCTCTCGGCCTCAGT...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGGGACACCATGGGGCTaGATCCCATTCACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLGTPWG*IPFTAP
Trigger: GGGGGCTGTGAATGGGATGCAGCCCCATGGTGTCCC...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGGTACCTCAAGCCCATaGCTATATGCTTTATCATGT +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGGTSSP*LYALSC
Trigger: ACATGATAAAGCATATAGGCATGGGCTTGAGGTACC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGAGATCCTGCCACACCTaGTGCCCCGTGCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLRSCHT*CPVLSG
Trigger: CCCTGACAGCACGGGGCAGCAGGTGTGGCAGGATCT...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGTGGCTGAGGGCAGGTaGTGCATCTCCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLVAEGR*CISILA
Trigger: GGCCAGGATGGAGATGCAGCACCTGCCCTCAGCCAC...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCATATGTGTTGTACATaGGGTACTCCTGGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMHMCCT*GTPGPQ
Trigger: TTGAGGGCCAGGAGTACCGCATGTACAACACATATG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACTATGACCCACAGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGAAAGAGCCACTTCCACTaGATAGATGGAGGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: TMTHRQKPEGRSWNAYQGKSHFH*IDGGSR
Trigger: TCTACTGCCTCCATCTATCCAGTGGAAGTGGCTCTT...TCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCTGTGGGTCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCACCATGAATGTACCTaGGGAAATCAACTGACCTCC +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMHHECT*GNQLTS
Trigger: GGAGGTCAGTTGATTTCCCCAGGTACATTCATGGTG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACGCTGCGGAGGACACTTaGGCGCTCCAGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINAAEDT*ALQGQD
Trigger: GTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGC...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGGCTGCATCTCCATCCTaGCCAAAGAACCTTGTATAC +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMAASPS*PKNLVY
Trigger: GTATACAAGGTTCTTTGGCCAGGATGGAGATGCAGC...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp AGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGAAAAATGGGAGGCAGCCTCCATTTTCAATaGGTCCATCATGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RQKPEGRSWNAYQGKMGGSLHFQ*VHHGPC
Trigger: ACAAGGACCATGATGGACTCATTGAAAATGGAGGCT...GCCTCCCATTTTTCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR TCA 90 bp ACTATGACCCACAGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGACCCTGTTGGGAGAGATaGCAGTCATACATACTAACT +
Preference number: 4 (lower is better)
Translates to: TMTHRQKPEGRSWNAYQGPCWER*QSYILT
Trigger: AGTTAGTATGTATGACTGTCATCTCTCCCAACAGGG...TCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCTGTGGGTCATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR TCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCCGCATGTAGGCCAGTaGGCGGAACACTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINPHVGQ*AEHSLL
Trigger: CAGCAGCGAGTGTTCCGCTCACTGGCCTACATGCGG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACGATCCTGGGTCCCCATaGCCTCGATGGCGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINDPGSP*PRWRQV
Trigger: GACTTGGCGCCATCGAGGTCATGGGGACCCAGGATC...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTGGAAGTATAGTTCATTaGACAGCGCAGATTTGTACC +
Preference number: 4 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGGSIVH*TAQICT
Trigger: GGTACAAATCTGCGCTGTTCAATGAACTATACTTCC...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGAGTTTTGATCACCCGTaGGGTAATAGTCCCGATAAA +
Preference number: 4 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRSFDHP*GNSPDK
Trigger: TTTATCGGGACTATTACCTCACGGGTGATCAAAACT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGATCATAGGTCTGGTCTaGATAGCCTCCATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGIIGLV*IASIFN
Trigger: ATTGAAAATGGAGGCTATGCAGACCAGACCTATGAT...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp GTAGAGTCTTTGCCTTCAAGGAGCTCCCAGCAAGTGGAGGAGATAACTATGACCCTCCAGCTGCTCCCATaGCGTGTAATAGACAATGAG +
Preference number: 4 (lower is better)
Translates to: VESLPSRSSQQVEEITMTLQLLP*RVIDNE
Trigger: CTCATTGTCTATTACACGGCATGGGAGCAGCTGGAG...GGTCATAGTTATCTCCTCCACTTGCTGGGAGCTCCTTGAAGGCAAAGACTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR GCA 90 bp GTAGAGTCTTTGCCTTCAAGGAGCTCCCAGCAAGTGGAGGAGATAACTATGACCAGGCAGGAGCTGGAATaGATACCAGGGAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: VESLPSRSSQQVEEITMTRQELE*IPGKNG
Trigger: CCCATTTTTCCCTGGTATGCATTCCAGCTCCTGCCT...GGTCATAGTTATCTCCTCCACTTGCTGGGAGCTCCTTGAAGGCAAAGACTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTTGGCACAGCTTATCTaGTCCGAGGCTGGGACGCCG +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLLAQLI*SEAGTP
Trigger: CGGCGTCCCAGCCTCGGAGCAGATAAGCTGTGCCAA...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTGCTGGTACACAGTCTaGCCTTCCCGACGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLCWYTV*PSRRRH
Trigger: GTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCA...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCATTGGGTTATGCCTTaGAGAAATTTGGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMHWVMP*RNLVVE
Trigger: CTCAACCACCAAATTTCTTCAAGGCATAACCCAATG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR TCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGGGAAGTATAGTTCATTaGACAGCGCAGATTTGTACC +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMGSIVH*TAQICT
Trigger: GGTACAAATCTGCGCTGTTCAATGAACTATACTTCC...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACGTGTCAGGTCCTCCCTaGGAGTGGCCAGAGCCATGT +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINVSGPP*EWPEPC
Trigger: ACATGGCTCTGGCCACTCTCAGGGAGGACCTGACAC...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGAGTTTTGATCACCCGTaGGGTAATAGTCCCGATAAA +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMSFDHP*GNSPDK
Trigger: TTTATCGGGACTATTACCTCACGGGTGATCAAAACT...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACGTTTGGGGGTCAGACTaGCAGCTCCAGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINVWGSD*QLQLLP
Trigger: TGGGAGCAGCTGGAGCTGCCAGTCTGACCCCCAAAC...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp GTAGAGTCTTTGCCTTCAAGGAGCTCCCAGCAAGTGGAGGAGATAACTATGACCGTTGAGGAAGTTTTCTaGGCCAGGATACAGATGGTG +
Preference number: 4 (lower is better)
Translates to: VESLPSRSSQQVEEITMTVEEVF*ARIQMV
Trigger: CACCATCTGTATCCTGGCCCAGAAAACTTCCTCAAC...GGTCATAGTTATCTCCTCCACTTGCTGGGAGCTCCTTGAAGGCAAAGACTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCTGGCAGTATGCCTCTaGGGTCTGGAAGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINLAVCL*GLEGQT
Trigger: GGTCTGGCCTTCCAGACCCCAGAGGCATACTGCCAG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGAGCTGGTGTTTCAGTaGAGCCGGGGAGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLELVFQ*SRGALA
Trigger: AGCAAGAGCTCCCCGGCTCCACTGAAACACCAGCTC...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTATCTGCTCCGAGGCTaGGACGCCGGTTCCCATGTT +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLYLLRG*DAGSHV
Trigger: AACATGGGAACCGGCGTCCCAGCCTCGGAGCAGATA...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGGGTGCTTTGGCCAGTaGGAGAGTCCAGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLGCFGQ*ESPAVH
Trigger: ATGGACAGCTGGACTCTCCCACTGGCCAAAGCACCC...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACAACTCCAGGCGGCACTaGCCTCGAGGTCGCAACTTG +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINNSRRH*PRGRNL
Trigger: CAAGTTGCGACCTCGAGGCCAGTGCCGCCTGGAGTT...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCGTAGTCCCGTAGGGTaGGGCGGAGGTGACACATGT +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINRSPVG*GGGDTC
Trigger: ACATGTGTCACCTCCGCCCCACCCTACGGGACTACG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGAAGCCCATGCCTATATaGTTTATCATGTTGCTTAGG +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMKPMPI*FIMLLR
Trigger: CCTAAGCAACATGATAAAGCATATAGGCATGGGCTT...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTCCAGGGACAGGACTTaGTGGTACACAGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLSRDRT*WYTVCP
Trigger: AGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGA...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCTCCTACAGGCAGGCTaGTGTCCTGGTAGTCATGGG +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINLLQAG*CPGSHG
Trigger: CCCATGACTACCAGGACAGCAGCCTGCCTGTAGGAG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGCACAGAGCAGCCATCTaGACCATCACAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLHRAAI*TITATA
Trigger: AGCTGTGGCTGTGATGGTCCAGATGGCTGCTCTGTG...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACGGTTCCCATGTTCCCTaGATCCTGGGTCCCCATGAC +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINGSHVP*ILGPHD
Trigger: GTCATGGGGACCCAGGATCCAGGGAACATGGGAACC...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTATCTGCTCCGAGGCTaGGACGCCGGTTCCCATGTT +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINYLLRG*DAGSHV
Trigger: AACATGGGAACCGGCGTCCCAGCCTCGGAGCAGATA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGCCAACGACAGAACTaGCCTCTCCAGCCACGGGTA +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINCQRQN*PLQPRV
Trigger: TACCCGTGGCTGGAGAGGCCAGTTCTGTCGTTGGCA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCTCCACAGTAAGCACTaGGGCCTGTGGTCACCCATC +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINLHSKH*GLWSPI
Trigger: GATGGGTGACCACAGGCCCCAGTGCTTACTGTGGAG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTCCAGCTGTCCATCCTaGAGTAGATCCTGCCACACC +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINSSCPS*SRSCHT
Trigger: GGTGTGGCAGGATCTACTTCAGGATGGACAGCTGGA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTGTTGCAGGGCTAGCTaGATGGCCCATATGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLCCRAS*MAHMLS
Trigger: ACTGAGCATATGGGCCATGCAGCTAGCCCTGCAACA...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGCAGAGTCCTCCGGATTaGAGCAGTCCGTCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLQSPPD*SSPSLL
Trigger: CAAAAGAGACGGACTGCTGCAATCCGGAGGACTCTG...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTTCCGGTACCACCACTaGAGGTACCTCAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINFRYHH*RYLKPM
Trigger: CATGGGCTTGAGGTACCTGCAGTGGTGGTACCGGAA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp AGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGAAAAATGGGAGGCTCAATGAGTCCATCATaGTCCTTGTCAAACTTCATT +
Preference number: 4 (lower is better)
Translates to: RQKPEGRSWNAYQGKMGGSMSPS*SLSNFI
Trigger: AATGAAGTTTGACAAGGACCATGATGGACTCATTGA...GCCTCCCATTTTTCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp AGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGAAAAATGGGAGGCTGCCTTGAAGAAATTTaGTGGTTGAGGAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RQKPEGRSWNAYQGKMGGCLEEI*WLRKFS
Trigger: AGAAAACTTCCTCAACCACCAAATTTCTTCAAGGCA...GCCTCCCATTTTTCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR TCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTTCTCTGTAAACTCATaGGCCAGACAGATGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLFSVNS*ARQMRQ
Trigger: CTGGCGCATCTGTCTGGCTCATGAGTTTACAGAGAA...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGATGACTGTCCGGTGCTaGTACATTCCAGGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLMTVRC*YIPGLS
Trigger: GCTTAACCCTGGAATGTATCAGCACCGGACAGTCAT...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTGTCATACTGTAGGCTaGGCTCAAGTTTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLCHTVG*AQVWAR
Trigger: TCTGGCCCAAACTTGAGCTCAGCCTACAGTATGACA...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTTGCAGGGCTAGCTaGATGGCCCATATGCTCAGT +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINCCRAS*MAHMLS
Trigger: ACTGAGCATATGGGCCATGCAGCTAGCCCTGCAACA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTCCAATACCGGGCTCTaGCAAGCTGAGATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINSNTGL*QAEILS
Trigger: AGAGAGGATCTCAGCTTGGCAGAGCCCGGTATTGGA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACGCACGGACCACATGTTaGGTAGGAAACACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINARTTC*VGNTSV
Trigger: CACTGAGGTGTTTCCTACCCAACATGTGGTCCGTGC...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGTCTTCTTTTCCACATaGGTCTTCCGGTACCACCAC +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLVFFST*VFRYHH
Trigger: GTGGTGGTACCGGAAGACCCATGTGGAAAAGAAGAC...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCAATCAGCAGTATCATaGATTAAATATGCATTGACG +
Preference number: 4 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMQSAVS*IKYALT
Trigger: CGTCAATGCATATTTAATCCATGATACTGCTGATTG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTCATACTGTAGGCTaGGCTCAAGTTTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINCHTVG*AQVWAR
Trigger: TCTGGCCCAAACTTGAGCTCAGCCTACAGTATGACA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACATTCCAGGGTTAAGCTaGCAACGACAGAACTGGCCT +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINIPGLS*QRQNWP
Trigger: AGGCCAGTTCTGTCGTTGGCAGCTTAACCCTGGAAT...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCTTGTGGATCCTCTTTaGCACAGCTTATCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINLVDPL*HSLSAP
Trigger: CGGAGCAGATAAGCTGTGCCAAAGAGGATCCACAAG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGAAGAAATTTGGTGGTTaGGGAAGTTTTCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLKKFGG*GSFLGQ
Trigger: CTGGCCCAGAAAACTTCCTCAACCACCAAATTTCTT...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR TCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGGATTAAATATGCATTaGCGCGGAGCCATGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLGLNMH*RGAMVH
Trigger: ATGAACCATGGCTCCGCGTCAATGCATATTTAATCC...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCATATGTGTTGTACATaGGGTACTCCTGGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINHMCCT*GTPGPQ
Trigger: TTGAGGGCCAGGAGTACCGCATGTACAACACATATG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGTTGTAATAGCGGCCTaGAGTCGAGGAAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLVVIAA*SRGREK
Trigger: TTTTTCTCTTCCTCGACTCCAGGCCGCTATTACAAC...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACAAGAGCCACTTCCACTaGATAGATGGAGGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINKSHFH*IDGGSR
Trigger: TCTACTGCCTCCATCTATCCAGTGGAAGTGGCTCTT...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACATTTACTGGCACAATTaGGTGGAGAGAAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINIYWHN*VERREG
Trigger: CCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAAT...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCACCATGAATGTACCTaGGGAAATCAACTGACCTCC +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINHHECT*GNQLTS
Trigger: GGAGGTCAGTTGATTTCCCCAGGTACATTCATGGTG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACGCTGCATCTCCATCCTaGCCAAAGAACCTTGTATAC +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINAASPS*PKNLVY
Trigger: GTATACAAGGTTCTTTGGCCAGGATGGAGATGCAGC...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR TCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACGAGACGTTGTTAGCTTaGAAGGGTTTCCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINETLLA*KGFLFS
Trigger: AGAGAAGAGGAAACCCTTTCAAGCTAACAACGTCTC...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGAGATGGGAAAAGGAGTaGATTACCTCTTGGATCATG +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLRWEKE*ITSWIM
Trigger: CATGATCCAAGAGGTAATGCACTCCTTTTCCCATCT...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR GCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGGTACCTCAAGCCCATaGCTATATGCTTTATCATGT +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLGTSSP*LYALSC
Trigger: ACATGATAAAGCATATAGGCATGGGCTTGAGGTACC...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTCATACATACTAACTTaGCACCCTCTGAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINSYILT*HPLKSH
Trigger: GTGGCTCTTCAGAGGGTGCCAAGTTAGTATGTATGA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR GCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACGATGGCATTGGGTTATaGCTTGAAGAAATTTGGTGG +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINDGIGL*LEEIWW
Trigger: CCACCAAATTTCTTCAAGGCATAACCCAATGCCATC...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CCA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTCAATGAGTCCATCATaGTCCTTGTCAAACTTCATT +
Preference number: 4 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLSMSPS*SLSNFI
Trigger: AATGAAGTTTGACAAGGACCATGATGGACTCATTGA...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CCA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTCAATGAGTCCATCATaGTCCTTGTCAAACTTCATT +
Preference number: 4 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINSMSPS*SLSNFI
Trigger: AATGAAGTTTGACAAGGACCATGATGGACTCATTGA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS CCA 90 bp ATCTGCTCCGAGGCTGGGACGCCGGTTCCCATGTTCCCTGGATCCTaGGTCCCCATGACCTCGATGGCGCCAAGTCCCGAGCCCTCGGAT +
Preference number: 5 (lower is better)
Translates to: ICSEAGTPVPMFPGS*VPMTSMAPSPEPSD
Trigger: ATCCGAGGGCTCGGGACTTGGCGCCATCGAGGTCATGGGGACCCAGGATCCAGGGAACATGGGAACCGGCGTCCCAGCCTCGGAGCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS-3UTR CAA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCTGCGGGCGCCGGTCGTaGTTAGGTATCGTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSCGRRS*LGIVPE
Trigger: CTCCGGGACGATACCTAACAACGACCGGCGCCCGCA...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS GCA 90 bp GTCCCGAGCCCTCGGATACTAAGTATCTCGCCAGCCTATTCCAGATaGGGGCGCCGGTCGTTGTTAGGTATCGTCCCGGAGGGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: VPSPRILSISPAYSR*GRRSLLGIVPEGRA
Trigger: CGCCCGGCCCTCCGGGACGATACCTAACAACGACCGGCGCCCGCATCTGGAATAGGCTGGCGAGATACTTAGTATCCGAGGGCTCGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS CCA 90 bp ACAGCTTATCTGCTCCGAGGCTGGGACGCCGGTTCCCATGTTCCCTaGATCCTGGGTCCCCATGACCTCGATGGCGCCAAGTCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: TAYLLRGWDAGSHVP*ILGPHDLDGAKSRA
Trigger: GGCTCGGGACTTGGCGCCATCGAGGTCATGGGGACCCAGGATCCAGGGAACATGGGAACCGGCGTCCCAGCCTCGGAGCAGATAAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS-3UTR CAA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCAGCAGTCCGTCTCTTTaGGGGGTCGGCTGTCTTCGG +
Preference number: 5 (lower is better)
Translates to: TQALPHGTVAAFSCLEALSSPSL*GVGCLR
Trigger: CCGAAGACAGCCGACCCCCAAAAGAGACGGACTGCT...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS GCA 90 bp CAGTTCCAGCTGCGGAGGACACTTGGGCGCTCCAGGGACAGGACTTaGTGGTACACAGTCTGCCCTTCCCGACGCAGGCACACTGTGAAC +
Preference number: 5 (lower is better)
Translates to: QFQLRRTLGRSRDRT*WYTVCPSRRRHTVN
Trigger: GTTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCTGGAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467252.5
ENST00000485259.1
CDS CCA 90 bp CTACCGCGCCTCGCAGGCCATGCAGTTTCTAGCAGAGGCAGGTCCTaGGGAAGGGAGGGCAATGGAAGATACAGATGTGGGGGCCTCACC +
Preference number: 5 (lower is better)
Translates to: LPRLAGHAVSSRGRS*GREGNGRYRCGGLT
Trigger: GGTGAGGCCCCCACATCTGTATCTTCCATTGCCCTCCCTTCCCCAGGACCTGCCTCTGCTAGAAACTGCATGGCCTGCGAGGCGCGGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485259.1
CDS-3UTR CAA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCATCAGGGACATGGGTTaGGGGGTCAGACTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSIRDMG*GVRLAA
Trigger: AGCTGCCAGTCTGACCCCCAAACCCATGTCCCTGAT...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS TCA 90 bp TGCGTAGGGGTGCTTTGGCCAGTGGGAGAGTCCAGCTGTCCATCCTaGAGTAGATCCTGCCACACCTGCTGCCCCGTGCTGTCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: CVGVLWPVGESSCPS*SRSCHTCCPVLSGS
Trigger: TGACCCTGACAGCACGGGGCAGCAGGTGTGGCAGGATCTACTTCAGGATGGACAGCTGGACTCTCCCACTGGCCAAAGCACCCCTACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS GCA 90 bp CAGTTCCAGCTGCGGAGGACACTTGGGCGCTCCAGGGACAGGACTTaGTGGTACACAGTCTGCCCTTCCCGACGCAGGCACACTGTGAAT +
Preference number: 5 (lower is better)
Translates to: QFQLRRTLGRSRDRT*WYTVCPSRRRHTVN
Trigger: ATTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCTGGAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS CCA 90 bp TTCCAGCTGCGGAGGACACTTGGGCGCTCCAGGGACAGGACTTGCTaGTACACAGTCTGCCCTTCCCGACGCAGGCACACTGTGAATTGG +
Preference number: 5 (lower is better)
Translates to: FQLRRTLGRSRDRTC*YTVCPSRRRHTVNW
Trigger: CCAATTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS CCA 90 bp AGCAAAGTACCCACACAGGCCCCAGTTCCAGCTGCGGAGGACACTTaGGCGCTCCAGGGACAGGACTTGCTGGTACACAGTCTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: SKVPTQAPVPAAEDT*ALQGQDLLVHSLPF
Trigger: GAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCTGGAACTGGGGCCTGTGTGGGTACTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000485259.1
CDS CCA 90 bp ACTCCTGGCCCTCAAGGTAGCCAAATCGACCGTAGTCCCGTAGGGTaGGGCGGAGGTGACACATGTTTCTGCCCAGCTCCTCTGGTAGGG +
Preference number: 5 (lower is better)
Translates to: TPGPQGSQIDRSPVG*GGGDTCFCPAPLVG
Trigger: CCCTACCAGAGGAGCTGGGCAGAAACATGTGTCACCTCCGCCCCACCCTACGGGACTACGGTCGATTTGGCTACCTTGAGGGCCAGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CCA 90 bp TTCCAGCTGCGGAGGACACTTGGGCGCTCCAGGGACAGGACTTGCTaGTACACAGTCTGCCCTTCCCGACGCAGGCACACTGTGAACTTG +
Preference number: 5 (lower is better)
Translates to: FQLRRTLGRSRDRTC*YTVCPSRRRHTVNL
Trigger: CAAGTTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485259.1
CDS-3UTR CAA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCGAGGCAGTAGAGTCTTaGCCTTCAAGGAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: TQALPHGTVAAFSCLEALEAVES*PSRSSQ
Trigger: CTGGGAGCTCCTTGAAGGCAAAGACTCTACTGCCTC...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR CAA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGGGAGCCGGGGAGCTCTaGCTTCAGTGGGGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMGAGEL*LQWGRR
Trigger: TCGCCGCCCCCACTGAAGCAAGAGCTCCCCGGCTCC...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTGCGGGCGCCGGTCGTaGTTAGGTATCGTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGCGRRS*LGIVPE
Trigger: CTCCGGGACGATACCTAACAACGACCGGCGCCCGCA...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCGTAACCTGCACATCCTaGGTGCCGCCAGTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSVTCTS*VPPVSS
Trigger: TGAAGAGACTGGCGGCACCAAGGATGTGCAGGTTAC...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR CAA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCAGGCTGAGCTCAAGTTaGGGCCAGAGCATGATGAGG +
Preference number: 5 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSRLSSS*GQSMMR
Trigger: CCTCATCATGCTCTGGCCCAAACTTGAGCTCAGCCT...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS GCA 90 bp GGGCATGGTAGAAAGCAAAGTACCCACACAGGCCCCAGTTCCAGCTaGGGAGGACACTTGGGCGCTCCAGGGACAGGACTTGCTGGTACA +
Preference number: 5 (lower is better)
Translates to: GHGRKQSTHTGPSSS*GGHLGAPGTGLAGT
Trigger: TGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCTGGAACTGGGGCCTGTGTGGGTACTTTGCTTTCTACCATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000485259.1
CDS CCA 90 bp TTCCAGCTGCGGAGGACACTTGGGCGCTCCAGGGACAGGACTTGCTaGTACACAGTCTGCCCTTCCCGACGCAGGCACACTGTGAACTTA +
Preference number: 5 (lower is better)
Translates to: FQLRRTLGRSRDRTC*YTVCPSRRRHTVNL
Trigger: TAAGTTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467252.5
CDS-3UTR CAA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCGGAGTGCATTACCTCTaGGATCATGGTAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: TQALPHGTVAAFSCLEALGVHYL*DHGSCQ
Trigger: CTGGCAGCTACCATGATCCAAGAGGTAATGCACTCC...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CAA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCCCAAGTCAGGCCCTGTaGGGAGAGATGACAGTCATA +
Preference number: 5 (lower is better)
Translates to: TQALPHGTVAAFSCLEALPSQAL*GEMTVI
Trigger: TATGACTGTCATCTCTCCCAACAGGGCCTGACTTGG...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR CAA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCGGGCCTCGTCGTCATaGAGCCGACGATTAGCTCGC +
Preference number: 5 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGRASSS*SRRLAR
Trigger: GCGAGCTAATCGTCGGCTCAATGACGACGAGGCCCG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGAGCTGCGGAGGACACTaGGGCGCTCCAGGGACAGGA +
Preference number: 5 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRSCGGH*GAPGTG
Trigger: TCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCTGCGTAGGGGTGCTTaGGCCAGTGGGAGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGLRRGA*ASGRVQ
Trigger: CTGGACTCTCCCACTGGCCAAAGCACCCCTACGCAG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS GCA 90 bp AGGACACTTGGGCGCTCCAGGGACAGGACTTGCTGGTACACAGTCTaGCCTTCCCGACGCAGGCACACTGTGAATTGGTCAGCGATGACT +
Preference number: 5 (lower is better)
Translates to: RTLGRSRDRTCWYTV*PSRRRHTVNWSAMT
Trigger: AGTCATCGCTGACCAATTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS GCA 90 bp ATCGACCGTAGTCCCGTAGGGTGGGGCGGAGGTGACACATGTTTCTaGCCAGCTCCTCTGGTAGGGAGTCCTCAAGAACTTCCAGCCACA +
Preference number: 5 (lower is better)
Translates to: IDRSPVGWGGGDTCF*PAPLVGSPQELPAT
Trigger: TGTGGCTGGAAGTTCTTGAGGACTCCCTACCAGAGGAGCTGGGCAGAAACATGTGTCACCTCCGCCCCACCCTACGGGACTACGGTCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CCA 90 bp TTCCCCGCTACGCTCCAGACAGAAGGGCTCATTCCACAAACCCCCTaGGGCATCGTCTCCACCACCCAGTCCATTCCGCATGGAGAACAT +
Preference number: 5 (lower is better)
Translates to: FPATLQTEGLIPQTP*GIVSTTQSIPHGEH
Trigger: ATGTTCTCCATGCGGAATGGACTGGGTGGTGGAGACGATGCCCCAGGGGGTTTGTGGAATGAGCCCTTCTGTCTGGAGCGTAGCGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS-3UTR CAA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTCGGGCCTCGTCGTCATaGAGCCGACGATTAGCTCGC +
Preference number: 5 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGRASSS*SRRLAR
Trigger: GCGAGCTAATCGTCGGCTCAATGACGACGAGGCCCG...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS GCA 90 bp AGGACACTTGGGCGCTCCAGGGACAGGACTTGCTGGTACACAGTCTaGCCTTCCCGACGCAGGCACACTGTGAACTTAAGAGGGCAGATA +
Preference number: 5 (lower is better)
Translates to: RTLGRSRDRTCWYTV*PSRRRHTVNLRGQI
Trigger: TATCTGCCCTCTTAAGTTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467252.5
CDS CCA 90 bp CATCAGCTGCCCAGAGTCCTCCGGATTGCAGCAGTCCGTCTCTTTTaGGGGTCGGCTGTCTTCGGGACTCTTACAGTCTGTAACCTGCAC +
Preference number: 5 (lower is better)
Translates to: HQLPRVLRIAAVRLF*GSAVFGTLTVCNLH
Trigger: GTGCAGGTTACAGACTGTAAGAGTCCCGAAGACAGCCGACCCCCAAAAGAGACGGACTGCTGCAATCCGGAGGACTCTGGGCAGCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS CCA 90 bp ATGATCCTGGGCATGTCCCAAGCCAGTGAAAACTCCAGGCGGCACTaGCCTCGAGGTCGCAACTTGCTGGAAACACACACAGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: MILGMSQASENSRRH*PRGRNLLETHTAPA
Trigger: TGCTGGAGCTGTGTGTGTTTCCAGCAAGTTGCGACCTCGAGGCCAGTGCCGCCTGGAGTTTTCACTGGCTTGGGACATGCCCAGGATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS-3UTR CAA 90 bp ACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCCCTCGTCATACATACTAACTaGGCACCCTCTGAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: TQALPHGTVAAFSCLEALVIHTN*APSEEP
Trigger: TGGCTCTTCAGAGGGTGCCAAGTTAGTATGTATGAC...GAGGGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR CAA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTAGCAGTCCGTCTCTTTaGGGGGTCGGCTGTCTTCGG +
Preference number: 5 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGSSPSL*GVGCLR
Trigger: CCGAAGACAGCCGACCCCCAAAAGAGACGGACTGCT...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp CCAGACCCAGGCGCTCCCACACGGTACGGTAGCAGCCTTCAGCTGTCTGGAAGCGGAGACGTTGTTAGCTaGAAAGGGTTTCCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: PDPGAPTRYGSSLQLSGSGDVVS*KGFPLL
Trigger: GAGAAGAGGAAACCCTTTCAAGCTAACAACGTCTCC...GCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378094.4
CDS-3UTR CAA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCTGCGTAGGGGTGCTTaGGCCAGTGGGAGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMLRRGA*ASGRVQ
Trigger: CTGGACTCTCCCACTGGCCAAAGCACCCCTACGCAG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS GCA 90 bp TTGGCCCCGGCTGAGGATAGAAGAAAACTTATCCTGGATGTCCTGTaGCCCACACAGAGCAGCCATCTGGACCATCACAGCCACAGCTGC +
Preference number: 5 (lower is better)
Translates to: LAPAEDRRKLILDVL*PTQSSHLDHHSHSC
Trigger: GCAGCTGTGGCTGTGATGGTCCAGATGGCTGCTCTGTGTGGGGCACAGGACATCCAGGATAAGTTTTCTTCTATCCTCAGCCGGGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000486797.1
CDS GCA 90 bp CTTTACCCTCATAGGAAACCATCAGCTGCCCAGAGTCCTCCGGATTaGAGCAGTCCGTCTCTTTTGGGGGTCGGCTGTCTTCGGGACTCT +
Preference number: 5 (lower is better)
Translates to: LYPHRKPSAAQSPPD*SSPSLLGVGCLRDS
Trigger: AGAGTCCCGAAGACAGCCGACCCCCAAAAGAGACGGACTGCTGCAATCCGGAGGACTCTGGGCAGCTGATGGTTTCCTATGAGGGTAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS GCA 90 bp CCACTCTGCGTATCGGCACAGTGCATAGTGGCTGAGGGCAGGTGCTaGATCTCCATCCTGGCCAAAGAACCTTGTATACCGCCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: PLCVSAQCIVAEGRC*ISILAKEPCIPPVV
Trigger: CACTACAGGCGGTATACAAGGTTCTTTGGCCAGGATGGAGATGCAGCACCTGCCCTCAGCCACTATGCACTGTGCCGATACGCAGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CCA 90 bp CTGCACATCCTTGGTGCCGCCAGTCTCTTCAGGGCAATAAACTTGTaGATCCTCTTTGGCACAGCTTATCTGCTCCGAGGCTGGGACGCC +
Preference number: 5 (lower is better)
Translates to: LHILGAASLFRAINL*ILFGTAYLLRGWDA
Trigger: GGCGTCCCAGCCTCGGAGCAGATAAGCTGTGCCAAAGAGGATCCACAAGTTTATTGCCCTGAAGAGACTGGCGGCACCAAGGATGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS-3UTR CAA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTAGCAAAGAAGCCGCCTaGGGCTCTCCTTCGGTTGTC +
Preference number: 5 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGSKEAA*GSPSVV
Trigger: GACAACCGAAGGAGAGCCCAAGGCGGCTTCTTTGCT...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGTAACCTGCACATCCTaGGTGCCGCCAGTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGVTCTS*VPPVSS
Trigger: TGAAGAGACTGGCGGCACCAAGGATGTGCAGGTTAC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCAGGCACACTGTGAATaGGTCAGCGATGACTGTCCG +
Preference number: 5 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGQAHCE*VSDDCP
Trigger: CGGACAGTCATCGCTGACCAATTCACAGTGTGCCTG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGAGGGGTTTGGAAGGGTaGGATGATGCAGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRRGLEG*DDAGAA
Trigger: GGCTGCTCCTGCATCATCCAACCCTTCCAAACCCCT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTAGGGGTTTGGAAGGGTaGGATGATGCAGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGRGLEG*DDAGAA
Trigger: GGCTGCTCCTGCATCATCCAACCCTTCCAAACCCCT...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS TCA 90 bp CGACGCAGGCACACTGTGAATTGGTCAGCGATGACTGTCCGGTGCTaGTACATTCCAGGGTTAAGCTGCCAACGACAGAACTGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: RRRHTVNWSAMTVRC*YIPGLSCQRQNWPL
Trigger: GAGAGGCCAGTTCTGTCGTTGGCAGCTTAACCCTGGAATGTATCAGCACCGGACAGTCATCGCTGACCAATTCACAGTGTGCCTGCGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS CCA 90 bp CCTTCCCGACGCAGGCACACTGTGAACTTAAGAGGGCAGATAGGCTaGAACGGGGTAAACCACAGGGACCACAGACTAAGTCTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: PSRRRHTVNLRGQIG*NGVNHRDHRLSLPS
Trigger: AGAGGGAAGACTTAGTCTGTGGTCCCTGTGGTTTACCCCGTTCCAGCCTATCTGCCCTCTTAAGTTCACAGTGTGCCTGCGTCGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467252.5
CDS CCA 90 bp AACCAGCTAGGCTCTTCCCAGACACCAACCATACCCCTGGCACACTaGCCACTGCATGTGCATCCCTTACTAGACACACAGGCCACATGT +
Preference number: 5 (lower is better)
Translates to: NQLGSSQTPTIPLAH*PLHVHPLLDTQATC
Trigger: ACATGTGGCCTGTGTGTCTAGTAAGGGATGCACATGCAGTGGCCAGTGTGCCAGGGGTATGGTTGGTGTCTGGGAAGAGCCTAGCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488292.1
CDS-3UTR CAA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCCAAGTCAGGCCCTGTaGGGAGAGATGACAGTCATA +
Preference number: 5 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGPSQAL*GEMTVI
Trigger: TATGACTGTCATCTCTCCCAACAGGGCCTGACTTGG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR CAA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGAGCAAAGAAGCCGCCTaGGGCTCTCCTTCGGTTGTC +
Preference number: 5 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMSKEAA*GSPSVV
Trigger: GACAACCGAAGGAGAGCCCAAGGCGGCTTCTTTGCT...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCCAGAGTCCTCCGGATaGCAGCAGTCCGTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRPESSG*QQSVSF
Trigger: AAAAGAGACGGACTGCTGCAATCCGGAGGACTCTGG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTCAGGCACACTGTGAATaGGTCAGCGATGACTGTCCG +
Preference number: 5 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGQAHCE*VSDDCP
Trigger: CGGACAGTCATCGCTGACCAATTCACAGTGTGCCTG...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCCTCGAGGTCGCAACTaGCTGGAAACACACACAGCT +
Preference number: 5 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRPRGRN*LETHTA
Trigger: AGCTGTGTGTGTTTCCAGCAAGTTGCGACCTCGAGG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCCGCCTGTAGTGGACTaGGCCTTTAGCTCCAAACAT +
Preference number: 5 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGPPVVD*AFSSKH
Trigger: ATGTTTGGAGCTAAAGGCCAAGTCCACTACAGGCGG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGCCTGGCCAAAGAACCTaGTATACCGCCTGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGPGQRT*YTACSG
Trigger: TCCACTACAGGCGGTATACAAGGTTCTTTGGCCAGG...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGAGGCTGAGCTCAAGTTaGGGCCAGAGCATGATGAGG +
Preference number: 5 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRRLSSS*GQSMMR
Trigger: CCTCATCATGCTCTGGCCCAAACTTGAGCTCAGCCT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS TCA 90 bp AGATCCTCTCTTCCCACTCTGCGTATCGGCACAGTGCATAGTGGCTaGGGGCAGGTGCTGCATCTCCATCCTGGCCAAAGAACCTTGTAT +
Preference number: 5 (lower is better)
Translates to: RSSLPTLRIGTVHSG*GQVLHLHPGQRTLY
Trigger: ATACAAGGTTCTTTGGCCAGGATGGAGATGCAGCACCTGCCCTCAGCCACTATGCACTGTGCCGATACGCAGAGTGGGAAGAGAGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS-3UTR CAA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGGAGCCCTACAATCCCTaGTTGCCCAGTTTCTCACCT +
Preference number: 5 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQREPYNP*LPSFSP
Trigger: AGGTGAGAAACTGGGCAACAAGGGATTGTAGGGCTC...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CAA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGTCTCTCATAGGCTTCTaGGCCCCGGCTGAGGATAGA +
Preference number: 5 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMSLIGF*APAEDR
Trigger: TCTATCCTCAGCCGGGGCCAAGAAGCCTATGAGAGA...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGGAGCCGGGGAGCTCTaGCTTCAGTGGGGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLGAGEL*LQWGRR
Trigger: TCGCCGCCCCCACTGAAGCAAGAGCTCCCCGGCTCC...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGACTTGTGGATCCTCTTaGGCACAGCTTATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGTCGSS*AQLICS
Trigger: GGAGCAGATAAGCTGTGCCAAAGAGGATCCACAAGT...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGCCTGGCCAAAGAACCTaGTATACCGCCTGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRPGQRT*YTACSG
Trigger: TCCACTACAGGCGGTATACAAGGTTCTTTGGCCAGG...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTTGAACAGCGCAGATTaGTACCAGGCAGGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGLNSAD*YQAGSD
Trigger: ATCACTGCCTGCCTGGTACAAATCTGCGCTGTTCAA...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS GCA 90 bp CTAAGTCTTCCCTCTCCTCAAATCAGCTCCTCCCCTTTCAGAGCCTaGAACTGTTACCACTGCACCATCAGCTTCAAGTCATCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LSLPSPQISSSPFRA*NCYHCTISFKSSPR
Trigger: CCTGGGGGATGACTTGAAGCTGATGGTGCAGTGGTAACAGTTGCAGGCTCTGAAAGGGGAGGAGCTGATTTGAGGAGAGGGAAGACTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467252.5
CDS CCA 90 bp ATGGCCCCTCCTGCAAAGGCCTGGACGTTCAGCTCAAAGATAGTTTaGAGAGCACGGACCACATGTTGGGTAGGAAACACCTCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: MAPPAKAWTFSSKIV*RARTTCWVGNTSVS
Trigger: AGACACTGAGGTGTTTCCTACCCAACATGTGGTCCGTGCTCTCCAAACTATCTTTGAGCTGAACGTCCAGGCCTTTGCAGGAGGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp AGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGAAAAATGGGAGGCCCCTACAATCCCTTGTaGCCCAGTTTCTCACCTCAG +
Preference number: 5 (lower is better)
Translates to: RQKPEGRSWNAYQGKMGGPYNPL*PSFSPQ
Trigger: CTGAGGTGAGAAACTGGGCAACAAGGGATTGTAGGG...GCCTCCCATTTTTCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CAA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGAGCACGGACCACATGTaGGGTAGGAAACACCTCAGT +
Preference number: 5 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMSTDHM*GRKHLS
Trigger: ACTGAGGTGTTTCCTACCCAACATGTGGTCCGTGCT...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGGGAGACGTTGTTAGCTaGAAAGGGTTTCCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGGDVVS*KGFPLL
Trigger: GAGAAGAGGAAACCCTTTCAAGCTAACAACGTCTCC...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GGTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTGGACATCATATGTGTaGTACATGCGGTACTCCTGG +
Preference number: 5 (lower is better)
Translates to: GHPQPPFTGTIGWREGKGWTSYV*YMRYSW
Trigger: CCAGGAGTACCGCATGTACAACACATATGATGTCCA...CCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS TCA 90 bp CTCCCAGCAAGTGGAGGAGATAACTATGACCCACAGACAGAAGCCTaGAGGCAGGAGCTGGAATGCATACCAGGGAAAAATGGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: LPASGGDNYDPQTEA*RQELECIPGKNGRL
Trigger: AAGCCTCCCATTTTTCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCTGTGGGTCATAGTTATCTCCTCCACTTGCTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS TCA 90 bp CTGGATCTTAGTGTCCTCATTTGGTCAGCGATGACTGTCCGGTGCTaGTACATTCCAGGGTTAAGCTGCCAACGACAGAACTGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: LDLSVLIWSAMTVRC*YIPGLSCQRQNWPL
Trigger: GAGAGGCCAGTTCTGTCGTTGGCAGCTTAACCCTGGAATGTATCAGCACCGGACAGTCATCGCTGACCAAATGAGGACACTAAGATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485259.1
CDS TCA 90 bp GGACTTGCTGGTACACAGTCTGCCCTTCCCGACGCAGGCACACTGTaGACTTGTGACCTTGCGCATGTTACTAAACCTCTCTGGATCTTA +
Preference number: 5 (lower is better)
Translates to: GLAGTQSALPDAGTL*TCDLAHVTKPLWIL
Trigger: TAAGATCCAGAGAGGTTTAGTAACATGCGCAAGGTCACAAGTTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485259.1
CDS-3UTR CAA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGACTTGTGGATCCTCTTaGGCACAGCTTATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMTCGSS*AQLICS
Trigger: GGAGCAGATAAGCTGTGCCAAAGAGGATCCACAAGT...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGAGCTGCGGAGGACACTaGGGCGCTCCAGGGACAGGA +
Preference number: 5 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLSCGGH*GAPGTG
Trigger: TCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCT...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS CCA 90 bp GTGGTTGAGGAAGTTTTCTGGGCCAGGATACAGATGGTGGAGAGATaGGAAAAGGAGTGCATTACCTCTTGGATCATGGTAGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: VVEEVFWARIQMVER*EKECITSWIMVAAS
Trigger: GCTGGCAGCTACCATGATCCAAGAGGTAATGCACTCCTTTTCCCATCTCTCCACCATCTGTATCCTGGCCCAGAAAACTTCCTCAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CAA 90 bp GTAGAGTCTTTGCCTTCAAGGAGCTCCCAGCAAGTGGAGGAGATAACTATGACCAGCACGGACCACATGTaGGGTAGGAAACACCTCAGT +
Preference number: 5 (lower is better)
Translates to: VESLPSRSSQQVEEITMTSTDHM*GRKHLS
Trigger: ACTGAGGTGTTTCCTACCCAACATGTGGTCCGTGCT...GGTCATAGTTATCTCCTCCACTTGCTGGGAGCTCCTTGAAGGCAAAGACTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CAA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTACGGACAAGATGGCATaGGGTTATGCCTTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGTDKMA*GYALKK
Trigger: TTTCTTCAAGGCATAACCCAATGCCATCTTGTCCGT...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CAA 90 bp AGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGAAAAATGGGAGGCGTCATACATACTAACTaGGCACCCTCTGAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: RQKPEGRSWNAYQGKMGGVIHTN*APSEEP
Trigger: TGGCTCTTCAGAGGGTGCCAAGTTAGTATGTATGAC...GCCTCCCATTTTTCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CAA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGTGGACATCATATGTGTaGTACATGCGGTACTCCTGG +
Preference number: 5 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMWTSYV*YMRYSW
Trigger: CCAGGAGTACCGCATGTACAACACATATGATGTCCA...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGTGGATTAAATATGCATaGACGCGGAGCCATGGTTCA +
Preference number: 5 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRWIKYA*TRSHGS
Trigger: TGAACCATGGCTCCGCGTCAATGCATATTTAATCCA...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS GCA 90 bp GTAAGCACTGGGGCCTGTGGTCACCCATCCATCATAGGTCTGGTCTaGATAGCCTCCATTTTCAATGAGTCCATCATGGTCCTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: VSTGACGHPSIIGLV*IASIFNESIMVLVK
Trigger: TTTGACAAGGACCATGATGGACTCATTGAAAATGGAGGCTATGCAGACCAGACCTATGATGGATGGGTGACCACAGGCCCCAGTGCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS-3UTR CAA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGTTCAGGGCAATAAACTaGTGGATCCTCTTTGGCACA +
Preference number: 5 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMFRAIN*WILFGT
Trigger: TGTGCCAAAGAGGATCCACAAGTTTATTGCCCTGAA...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGGTCCTTCAGGAAGTTTaGATCACCCGTGAGGTAATA +
Preference number: 5 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMVLQEV*ITREVI
Trigger: TATTACCTCACGGGTGATCAAAACTTCCTGAAGGAC...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS CCA 90 bp GAGGAGATAACTATGACCCACAGACAGAAGCCTGAAGGCAGGAGCTaGAATGCATACCAGGGAAAAATGGGAGGCTTTATAGACGGACAA +
Preference number: 5 (lower is better)
Translates to: EEITMTHRQKPEGRS*NAYQGKMGGFIDGQ
Trigger: TTGTCCGTCTATAAAGCCTCCCATTTTTCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCTGTGGGTCATAGTTATCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CAA 90 bp GTCACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTAGTCCATCATGGTCCTaGTCAAACTTCATTTCAGAT +
Preference number: 5 (lower is better)
Translates to: VTLNPHLLAQLGGEKGRGSPSWS*SNFISD
Trigger: ATCTGAAATGAAGTTTGACAAGGACCATGATGGACT...ACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp AGACAGAAGCCTGAAGGCAGGAGCTGGAATGCATACCAGGGAAAAATGGGAGGCATGAGTCATTCTTTCTaGAGCCCTACAATCCCTTGT +
Preference number: 5 (lower is better)
Translates to: RQKPEGRSWNAYQGKMGGMSHSF*SPTIPC
Trigger: ACAAGGGATTGTAGGGCTCAAGAAAGAATGACTCAT...GCCTCCCATTTTTCCCTGGTATGCATTCCAGCTCCTGCCTTCAGGCTTCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CAA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGCTTAGGGGTACAGAATaGATCATGTCGATGAAAGGT +
Preference number: 5 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMLRGTE*IMSMKG
Trigger: ACCTTTCATCGACATGATCAATTCTGTACCCCTAAG...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCTCCAGGGACAGGACTaGCTGGTACACAGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINLQGQD*LVHSLP
Trigger: GGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGAGGAAGTATAGTTCATaGAACAGCGCAGATTTGTAC +
Preference number: 5 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRRKYSS*NSADLY
Trigger: GTACAAATCTGCGCTGTTCAATGAACTATACTTCCT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGCCAAGTCAGGCCCTCTaGGATCATGGTAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLPSQAL*DHGSCQ
Trigger: CTGGCAGCTACCATGATCCAAGAGGGCCTGACTTGG...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378103.7
CDS TCA 90 bp ACGGACAAGATGGCATTGGGTTATGCCTTGAAGAAATTTGGTGGTTaGGGAAGTTTTCTGGGCCAGGATACAGATGGTGGAGAGATGGGA +
Preference number: 5 (lower is better)
Translates to: TDKMALGYALKKFGG*GSFLGQDTDGGEMG
Trigger: TCCCATCTCTCCACCATCTGTATCCTGGCCCAGAAAACTTCCTCAACCACCAAATTTCTTCAAGGCATAACCCAATGCCATCTTGTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS TCA 90 bp GGTTCAGGTCCTTCCAATCAGCAGTATCATGGATTAAATATGCATTaGCGCGGAGCCATGGTTCATCATCTGGGTCCCCAATATCATGGG +
Preference number: 5 (lower is better)
Translates to: GSGPSNQQYHGLNMH*RGAMVHHLGPQYHG
Trigger: CCCATGATATTGGGGACCCAGATGATGAACCATGGCTCCGCGTCAATGCATATTTAATCCATGATACTGCTGATTGGAAGGACCTGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000486797.1
ENST00000488292.1
CDS TCA 90 bp CTAGACACACAGGCCACATGTCCTTCAGGAAGTTTTGATCACCCGTaGGGTAATAGTCCCGATAAACCTGCAGCACAAACTTCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: LDTQATCPSGSFDHP*GNSPDKPAAQTSGS
Trigger: TGAACCTGAAGTTTGTGCTGCAGGTTTATCGGGACTATTACCTCACGGGTGATCAAAACTTCCTGAAGGACATGTGGCCTGTGTGTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000486797.1
ENST00000488292.1
CDS-3UTR CAA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTCTCTCATAGGCTTCTaGGCCCCGGCTGAGGATAGA +
Preference number: 5 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLSLIGF*APAEDR
Trigger: TCTATCCTCAGCCGGGGCCAAGAAGCCTATGAGAGA...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp GAAGGGAAGGGGTATGATTGTCCTGATGGCTCAGGGTTGCAGGAGGTTCAGAGGATATGCTTTATCATGTaGCTTAGGGAGACGTTGTTA +
Preference number: 5 (lower is better)
Translates to: EGKGYDCPDGSGLQEVQRICFIM*LRETLL
Trigger: TAACAACGTCTCCCTAAGCAACATGATAAAGCATAT...CCTCTGAACCTCCTGCAACCCTGAGCCATCAGGACAATCATACCCCTTCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGCCTCGAGGTCGCAACTaGCTGGAAACACACACAGCT +
Preference number: 5 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLPRGRN*LETHTA
Trigger: AGCTGTGTGTGTTTCCAGCAAGTTGCGACCTCGAGG...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp ACCCTCAACCCCCATTTACTGGCACAATTGGGTGGAGAGAAGGGAAGGGGTATGAGGAAGTATAGTTCATaGAACAGCGCAGATTTGTAC +
Preference number: 5 (lower is better)
Translates to: TLNPHLLAQLGGEKGRGMRKYSS*NSADLY
Trigger: GTACAAATCTGCGCTGTTCAATGAACTATACTTCCT...CATACCCCTTCCCTTCTCTCCACCCAATTGTGCCAGTAAATGGGGGTTGAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS CCA 90 bp GAAGAAATTTGGTGGTTGAGGAAGTTTTCTGGGCCAGGATACAGATaGTGGAGAGATGGGAAAAGGAGTGCATTACCTCTTGGATCATGG +
Preference number: 5 (lower is better)
Translates to: EEIWWLRKFSGPGYR*WRDGKRSALPLGSW
Trigger: CCATGATCCAAGAGGTAATGCACTCCTTTTCCCATCTCTCCACCATCTGTATCCTGGCCCAGAAAACTTCCTCAACCACCAAATTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CAA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTCTCTCATAGGCTTCTaGGCCCCGGCTGAGGATAGA +
Preference number: 5 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINSLIGF*APAEDR
Trigger: TCTATCCTCAGCCGGGGCCAAGAAGCCTATGAGAGA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGAGCACGGACCACATGTaGGGTAGGAAACACCTCAGT +
Preference number: 5 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLSTDHM*GRKHLS
Trigger: ACTGAGGTGTTTCCTACCCAACATGTGGTCCGTGCT...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACGAGGCAGTAGAGTCTTaGCCTTCAAGGAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINEAVES*PSRSSQ
Trigger: CTGGGAGCTCCTTGAAGGCAAAGACTCTACTGCCTC...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000378094.4
CDS-3UTR CAA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCCAGAGTCCTCCGGATaGCAGCAGTCCGTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINPESSG*QQSVSF
Trigger: AAAAGAGACGGACTGCTGCAATCCGGAGGACTCTGG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGCCGCCTGTAGTGGACTaGGCCTTTAGCTCCAAACAT +
Preference number: 5 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLPPVVD*AFSSKH
Trigger: ATGTTTGGAGCTAAAGGCCAAGTCCACTACAGGCGG...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS TCA 90 bp AATGGGAGGCTTTATAGACGGACAAGATGGCATTGGGTTATGCCTTaGAGAAATTTGGTGGTTGAGGAAGTTTTCTGGGCCAGGATACAG +
Preference number: 5 (lower is better)
Translates to: NGRLYRRTRWHWVMP*RNLVVEEVFWARIQ
Trigger: CTGTATCCTGGCCCAGAAAACTTCCTCAACCACCAAATTTCTTCAAGGCATAACCCAATGCCATCTTGTCCGTCTATAAAGCCTCCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS GCA 90 bp GGAAAAATGGGAGGCTTTATAGACGGACAAGATGGCATTGGGTTATaGCTTGAAGAAATTTGGTGGTTGAGGAAGTTTTCTGGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GKMGGFIDGQDGIGL*LEEIWWLRKFSGPG
Trigger: TCCTGGCCCAGAAAACTTCCTCAACCACCAAATTTCTTCAAGGCATAACCCAATGCCATCTTGTCCGTCTATAAAGCCTCCCATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CAA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCCATCGTGTAGGGGTTaGGAAGGGTTGGATGATGCA +
Preference number: 5 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINPSCRG*EGLDDA
Trigger: TGCATCATCCAACCCTTCCAAACCCCTACACGATGG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS CCA 90 bp TTTATAGACGGACAAGATGGCATTGGGTTATGCCTTGAAGAAATTTaGTGGTTGAGGAAGTTTTCTGGGCCAGGATACAGATGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: FIDGQDGIGLCLEEI*WLRKFSGPGYRWWR
Trigger: TCTCCACCATCTGTATCCTGGCCCAGAAAACTTCCTCAACCACCAAATTTCTTCAAGGCATAACCCAATGCCATCTTGTCCGTCTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS-3UTR CAA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTTGAACAGCGCAGATTaGTACCAGGCAGGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINLNSAD*YQAGSD
Trigger: ATCACTGCCTGCCTGGTACAAATCTGCGCTGTTCAA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGTTCAGGGCAATAAACTaGTGGATCCTCTTTGGCACA +
Preference number: 5 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLFRAIN*WILFGT
Trigger: TGTGCCAAAGAGGATCCACAAGTTTATTGCCCTGAA...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGGATTAAATATGCATaGACGCGGAGCCATGGTTCA +
Preference number: 5 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINWIKYA*TRSHGS
Trigger: TGAACCATGGCTCCGCGTCAATGCATATTTAATCCA...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACGTCCTTCAGGAAGTTTaGATCACCCGTGAGGTAATA +
Preference number: 5 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINVLQEV*ITREVI
Trigger: TATTACCTCACGGGTGATCAAAACTTCCTGAAGGAC...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACTGAGTCCATCATGGTCCTaGTCAAACTTCATTTCAGAT +
Preference number: 5 (lower is better)
Translates to: LFVPMCLSHHECTWGNQLSPSWS*SNFISD
Trigger: ATCTGAAATGAAGTTTGACAAGGACCATGATGGACT...CAGTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACCTTAGGGGTACAGAATaGATCATGTCGATGAAAGGT +
Preference number: 5 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINLRGTE*IMSMKG
Trigger: ACCTTTCATCGACATGATCAATTCTGTACCCCTAAG...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACAGTCCATCATGGTCCTaGTCAAACTTCATTTCAGAT +
Preference number: 5 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINSPSWS*SNFISD
Trigger: ATCTGAAATGAAGTTTGACAAGGACCATGATGGACT...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS-3UTR CAA 90 bp TTTTATTTGTACCCATGTGTCTGTCACACCATGAATGTACCTGGGGAAATCAACATATGCTTTATCATGTaGCTTAGGGAGACGTTGTTA +
Preference number: 5 (lower is better)
Translates to: FYLYPCVCHTMNVPGEINICFIM*LRETLL
Trigger: TAACAACGTCTCCCTAAGCAACATGATAAAGCATAT...GTTGATTTCCCCAGGTACATTCATGGTGTGACAGACACATGGGTACAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS CCA 72 bp GCTCCGGGGCAGCGCCCGCGCCCAGGTGCCAGCCCGTaGGAAGGTGACCCTGGGCGCCGGGATGACCCGAGC +
Preference number: 6 (lower is better)
Translates to: APGQRPRPGASP*EGDPGRRDDPS
Trigger: GCTCGGGTCATCCCGGCGCCCAGGGTCACCTTCCCACGGGCTGGCACCTGGGCGCGGGCGCTGCCCCGGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS CCA 72 bp GAGGCTGGGACGCCGGTTCCCATGTTCCCTGGATCCTaGGTCCCCATGACCTCGATGGCGCCAAGTCCCGAG +
Preference number: 6 (lower is better)
Translates to: EAGTPVPMFPGS*VPMTSMAPSPE
Trigger: CTCGGGACTTGGCGCCATCGAGGTCATGGGGACCCAGGATCCAGGGAACATGGGAACCGGCGTCCCAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS CCA 72 bp CTGCTCCGAGGCTGGGACGCCGGTTCCCATGTTCCCTaGATCCTGGGTCCCCATGACCTCGATGGCGCCAAG +
Preference number: 6 (lower is better)
Translates to: LLRGWDAGSHVP*ILGPHDLDGAK
Trigger: CTTGGCGCCATCGAGGTCATGGGGACCCAGGATCCAGGGAACATGGGAACCGGCGTCCCAGCCTCGGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS CAA 72 bp ATCTCGCCAGCCTATTCCAGATGCGGGCGCCGGTCGTaGTTAGGTATCGTCCCGGAGGGCCGGGCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: ISPAYSRCGRRS*LGIVPEGRALG
Trigger: CCCCAACGCCCGGCCCTCCGGGACGATACCTAACAACGACCGGCGCCCGCATCTGGAATAGGCTGGCGAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS GCA 72 bp CTGCGGAGGACACTTGGGCGCTCCAGGGACAGGACTTaGTGGTACACAGTCTGCCCTTCCCGACGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: LRRTLGRSRDRT*WYTVCPSRRRH
Trigger: GTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000485259.1
CDS CAA 72 bp GCTGCGGAGGACACTTGGGCGCTCCAGGGACAGGACTaGCTGGTACACAGTCTGCCCTTCCCGACGCAGGCA +
Preference number: 6 (lower is better)
Translates to: AAEDTWALQGQD*LVHSLPFPTQA
Trigger: TGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000485259.1
CDS CCA 72 bp CGGAGGACACTTGGGCGCTCCAGGGACAGGACTTGCTaGTACACAGTCTGCCCTTCCCGACGCAGGCACACT +
Preference number: 6 (lower is better)
Translates to: RRTLGRSRDRTC*YTVCPSRRRHT
Trigger: AGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000485259.1
CDS CCA 72 bp CCCACACAGGCCCCAGTTCCAGCTGCGGAGGACACTTaGGCGCTCCAGGGACAGGACTTGCTGGTACACAGT +
Preference number: 6 (lower is better)
Translates to: PTQAPVPAAEDT*ALQGQDLLVHS
Trigger: ACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCTGGAACTGGGGCCTGTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000485259.1
CDS CAA 72 bp ACCCACACAGGCCCCAGTTCCAGCTGCGGAGGACACTaGGGCGCTCCAGGGACAGGACTTGCTGGTACACAG +
Preference number: 6 (lower is better)
Translates to: THTGPSSSCGGH*GAPGTGLAGTQ
Trigger: CTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCTGGAACTGGGGCCTGTGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000485259.1
CDS CAA 90 bp GGGAGCTCTTGCTTCAGTGGGGGCGGCGACAGCAAAGAAGCCGCCTaGGGCTCTCCTTCGGTTGTCTCTGTAGGTCCTGGACGGGAAGGG +
Preference number: 6 (lower is better)
Translates to: GSSCFSGGGDSKEAA*GSPSVVSVGPGREG
Trigger: CCCTTCCCGTCCAGGACCTACAGAGACAACCGAAGGAGAGCCCAAGGCGGCTTCTTTGCTGTCGCCGCCCCCACTGAAGCAAGAGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS CAA 90 bp CCAGTTCCAGCTGCGGAGGACACTTGGGCGCTCCAGGGACAGGACTaGCTGGTACACAGTCTGCCCTTCCCGACGCAGGCACACTGTGAA +
Preference number: 6 (lower is better)
Translates to: PVPAAEDTWALQGQD*LVHSLPFPTQAHCE
Trigger: TTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCTGGAACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000485259.1
CDS TCA 72 bp TCGTCCCGGAGGGCCGGGCGTTGGGGAAAGCTTAAATaGGCTGGTGTTTCAGTGGAGCCGGGGAGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: SSRRAGRWGKLK*AGVSVEPGSSC
Trigger: GCAAGAGCTCCCCGGCTCCACTGAAACACCAGCTCATTTAAGCTTTCCCCAACGCCCGGCCCTCCGGGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS CCA 72 bp TGCTGCCCCGTGCTGTCAGGGTCAAAGGCTGTGATGTaGGTTACCGTGGTAGCTGCCGTGACTCGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: CCPVLSGSKAVM*VTVVAAVTRAA
Trigger: GGCTGCACGAGTCACGGCAGCTACCACGGTAACCCACATCACAGCCTTTGACCCTGACAGCACGGGGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS GCA 72 bp GGGCGCTCCAGGGACAGGACTTGCTGGTACACAGTCTaGCCTTCCCGACGCAGGCACACTGTGAATTGGTCA +
Preference number: 6 (lower is better)
Translates to: GRSRDRTCWYTV*PSRRRHTVNWS
Trigger: TGACCAATTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS CCA 72 bp CACCTCAGGCCTCCTGGAAACCCCTACCCGCTAACCTaGGGCCTGTGGTCACCCATCCATCATAGGTCTGGT +
Preference number: 6 (lower is better)
Translates to: HLRPPGNPYPLT*GLWSPIHHRSG
Trigger: ACCAGACCTATGATGGATGGGTGACCACAGGCCCCAGGTTAGCGGGTAGGGGTTTCCAGGAGGCCTGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000486797.1
ENST00000488292.1
CDS CCA 72 bp TGCAGCCACAGCCATCGTGTAGGGGTTTGGAAGGGTTaGATGATGCAGGAGCAGCCCCCGGACAGTTTCCCC +
Preference number: 6 (lower is better)
Translates to: CSHSHRVGVWKG*MMQEQPPDSFP
Trigger: GGGGAAACTGTCCGGGGGCTGCTCCTGCATCATCCAACCCTTCCAAACCCCTACACGATGGCTGTGGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CAA 72 bp TGCTTCAGTGGGGGCGGCGACAGCAAAGAAGCCGCCTaGGGCTCTCCTTCGGTTGTCTCTGTAGGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: CFSGGGDSKEAA*GSPSVVSVGPG
Trigger: TCCAGGACCTACAGAGACAACCGAAGGAGAGCCCAAGGCGGCTTCTTTGCTGTCGCCGCCCCCACTGAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS CAA 72 bp GTGCAGCCACAGCCATCGTGTAGGGGTTTGGAAGGGTaGGATGATGCAGGAGCAGCCCCCGGACAGTTTCCC +
Preference number: 6 (lower is better)
Translates to: VQPQPSCRGLEG*DDAGAAPGQFP
Trigger: GGGAAACTGTCCGGGGGCTGCTCCTGCATCATCCAACCCTTCCAAACCCCTACACGATGGCTGTGGCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CAA 90 bp AAGCAAAGTACCCACACAGGCCCCAGTTCCAGCTGCGGAGGACACTaGGGCGCTCCAGGGACAGGACTTGCTGGTACACAGTCTGCCCTT +
Preference number: 6 (lower is better)
Translates to: KQSTHTGPSSSCGGH*GAPGTGLAGTQSAL
Trigger: AAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCTGGAACTGGGGCCTGTGTGGGTACTTTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000485259.1
CDS GCA 72 bp AGAAAGCAAAGTACCCACACAGGCCCCAGTTCCAGCTaGGGAGGACACTTGGGCGCTCCAGGGACAGGACTT +
Preference number: 6 (lower is better)
Translates to: RKQSTHTGPSSS*GGHLGAPGTGL
Trigger: AAGTCCTGTCCCTGGAGCGCCCAAGTGTCCTCCGCAGCTGGAACTGGGGCCTGTGTGGGTACTTTGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000485259.1
CDS GCA 72 bp GGGCGCTCCAGGGACAGGACTTGCTGGTACACAGTCTaGCCTTCCCGACGCAGGCACACTGTGAACTTAAGA +
Preference number: 6 (lower is better)
Translates to: GRSRDRTCWYTV*PSRRRHTVNLR
Trigger: TCTTAAGTTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467252.5
CDS CCA 72 bp TGGATCCTCTTTGGCACAGCTTATCTGCTCCGAGGCTaGGACGCCGGTTCCCATGTTCCCTGGATCCTGGGT +
Preference number: 6 (lower is better)
Translates to: WILFGTAYLLRG*DAGSHVPWILG
Trigger: ACCCAGGATCCAGGGAACATGGGAACCGGCGTCCCAGCCTCGGAGCAGATAAGCTGTGCCAAAGAGGATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS CCA 72 bp CCTCAAGGTAGCCAAATCGACCGTAGTCCCGTAGGGTaGGGCGGAGGTGACACATGTTTCTGCCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: PQGSQIDRSPVG*GGGDTCFCPAP
Trigger: AGGAGCTGGGCAGAAACATGTGTCACCTCCGCCCCACCCTACGGGACTACGGTCGATTTGGCTACCTTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CAA 72 bp GCCCAGAGTCCTCCGGATTGCAGCAGTCCGTCTCTTTaGGGGGTCGGCTGTCTTCGGGACTCTTACAGTCTG +
Preference number: 6 (lower is better)
Translates to: AQSPPDCSSPSL*GVGCLRDSYSL
Trigger: CAGACTGTAAGAGTCCCGAAGACAGCCGACCCCCAAAAGAGACGGACTGCTGCAATCCGGAGGACTCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS GCA 72 bp CCTCGGATACTAAGTATCTCGCCAGCCTATTCCAGATaGGGGCGCCGGTCGTTGTTAGGTATCGTCCCGGAG +
Preference number: 6 (lower is better)
Translates to: PRILSISPAYSR*GRRSLLGIVPE
Trigger: CTCCGGGACGATACCTAACAACGACCGGCGCCCGCATCTGGAATAGGCTGGCGAGATACTTAGTATCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS GCA 72 bp AGTCCCGTAGGGTGGGGCGGAGGTGACACATGTTTCTaGCCAGCTCCTCTGGTAGGGAGTCCTCAAGAACTT +
Preference number: 6 (lower is better)
Translates to: SPVGWGGGDTCF*PAPLVGSPQEL
Trigger: AAGTTCTTGAGGACTCCCTACCAGAGGAGCTGGGCAGAAACATGTGTCACCTCCGCCCCACCCTACGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CCA 72 bp CCCAGAGTCCTCCGGATTGCAGCAGTCCGTCTCTTTTaGGGGTCGGCTGTCTTCGGGACTCTTACAGTCTGT +
Preference number: 6 (lower is better)
Translates to: PRVLRIAAVRLF*GSAVFGTLTVC
Trigger: ACAGACTGTAAGAGTCCCGAAGACAGCCGACCCCCAAAAGAGACGGACTGCTGCAATCCGGAGGACTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS CCA 72 bp GGCATGTCCCAAGCCAGTGAAAACTCCAGGCGGCACTaGCCTCGAGGTCGCAACTTGCTGGAAACACACACA +
Preference number: 6 (lower is better)
Translates to: GMSQASENSRRH*PRGRNLLETHT
Trigger: TGTGTGTGTTTCCAGCAAGTTGCGACCTCGAGGCCAGTGCCGCCTGGAGTTTTCACTGGCTTGGGACATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CAA 90 bp CAAGCCAGTGAAAACTCCAGGCGGCACTGGCCTCGAGGTCGCAACTaGCTGGAAACACACACAGCTCCAGCAATGCCTACTCCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: QASENSRRHWPRGRN*LETHTAPAMPTPFC
Trigger: GCAGAAAGGAGTAGGCATTGCTGGAGCTGTGTGTGTTTCCAGCAAGTTGCGACCTCGAGGCCAGTGCCGCCTGGAGTTTTCACTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS GCA 72 bp GGTCGGCTGTCTTCGGGACTCTTACAGTCTGTAACCTaGACATCCTTGGTGCCGCCAGTCTCTTCAGGGCAA +
Preference number: 6 (lower is better)
Translates to: GRLSSGLLQSVT*TSLVPPVSSGQ
Trigger: TTGCCCTGAAGAGACTGGCGGCACCAAGGATGTGCAGGTTACAGACTGTAAGAGTCCCGAAGACAGCCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS GCA 72 bp CATAGGAAACCATCAGCTGCCCAGAGTCCTCCGGATTaGAGCAGTCCGTCTCTTTTGGGGGTCGGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: HRKPSAAQSPPD*SSPSLLGVGCL
Trigger: AAGACAGCCGACCCCCAAAAGAGACGGACTGCTGCAATCCGGAGGACTCTGGGCAGCTGATGGTTTCCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS CAA 72 bp GAAAACTCCAGGCGGCACTGGCCTCGAGGTCGCAACTaGCTGGAAACACACACAGCTCCAGCAATGCCTACT +
Preference number: 6 (lower is better)
Translates to: ENSRRHWPRGRN*LETHTAPAMPT
Trigger: AGTAGGCATTGCTGGAGCTGTGTGTGTTTCCAGCAAGTTGCGACCTCGAGGCCAGTGCCGCCTGGAGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS GCA 72 bp CAGGCAGGCAGTGATCTGTCATCCAATACCGGGCTCTaGCAAGCTGAGATCCTCTCTTCCCACTCTGCGTAT +
Preference number: 6 (lower is better)
Translates to: QAGSDLSSNTGL*QAEILSSHSAY
Trigger: ATACGCAGAGTGGGAAGAGAGGATCTCAGCTTGGCAGAGCCCGGTATTGGATGACAGATCACTGCCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CAA 90 bp CATGGCCCCTCCTGCAAAGGCCTGGACGTTCAGCTCAAAGATAGTTaGGAGAGCACGGACCACATGTTGGGTAGGAAACACCTCAGTGTC +
Preference number: 6 (lower is better)
Translates to: HGPSCKGLDVQLKDS*ESTDHMLGRKHLSV
Trigger: GACACTGAGGTGTTTCCTACCCAACATGTGGTCCGTGCTCTCCAAACTATCTTTGAGCTGAACGTCCAGGCCTTTGCAGGAGGGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS CAA 90 bp AACCTGCACATCCTTGGTGCCGCCAGTCTCTTCAGGGCAATAAACTaGTGGATCCTCTTTGGCACAGCTTATCTGCTCCGAGGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: NLHILGAASLFRAIN*WILFGTAYLLRGWD
Trigger: GTCCCAGCCTCGGAGCAGATAAGCTGTGCCAAAGAGGATCCACAAGTTTATTGCCCTGAAGAGACTGGCGGCACCAAGGATGTGCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS TCA 72 bp GGTACACAGTCTGCCCTTCCCGACGCAGGCACACTGTaGACTTGTGACCTTGCGCATGTTACTAAACCTCTC +
Preference number: 6 (lower is better)
Translates to: GTQSALPDAGTL*TCDLAHVTKPL
Trigger: GAGAGGTTTAGTAACATGCGCAAGGTCACAAGTTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485259.1
CDS GCA 72 bp TGCGTATCGGCACAGTGCATAGTGGCTGAGGGCAGGTaGTGCATCTCCATCCTGGCCAAAGAACCTTGTATA +
Preference number: 6 (lower is better)
Translates to: CVSAQCIVAEGR*CISILAKEPCI
Trigger: TATACAAGGTTCTTTGGCCAGGATGGAGATGCAGCACCTGCCCTCAGCCACTATGCACTGTGCCGATACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CCA 72 bp CTTGGTGCCGCCAGTCTCTTCAGGGCAATAAACTTGTaGATCCTCTTTGGCACAGCTTATCTGCTCCGAGGC +
Preference number: 6 (lower is better)
Translates to: LGAASLFRAINL*ILFGTAYLLRG
Trigger: GCCTCGGAGCAGATAAGCTGTGCCAAAGAGGATCCACAAGTTTATTGCCCTGAAGAGACTGGCGGCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS GCA 72 bp GCTGAGGATAGAAGAAAACTTATCCTGGATGTCCTGTaGCCCACACAGAGCAGCCATCTGGACCATCACAGC +
Preference number: 6 (lower is better)
Translates to: AEDRRKLILDVL*PTQSSHLDHHS
Trigger: GCTGTGATGGTCCAGATGGCTGCTCTGTGTGGGGCACAGGACATCCAGGATAAGTTTTCTTCTATCCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000486797.1
CDS GCA 72 bp CCCTCTCCTCAAATCAGCTCCTCCCCTTTCAGAGCCTaGAACTGTTACCACTGCACCATCAGCTTCAAGTCA +
Preference number: 6 (lower is better)
Translates to: PSPQISSSPFRA*NCYHCTISFKS
Trigger: TGACTTGAAGCTGATGGTGCAGTGGTAACAGTTGCAGGCTCTGAAAGGGGAGGAGCTGATTTGAGGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467252.5
CDS CCA 72 bp CCTGCAAAGGCCTGGACGTTCAGCTCAAAGATAGTTTaGAGAGCACGGACCACATGTTGGGTAGGAAACACC +
Preference number: 6 (lower is better)
Translates to: PAKAWTFSSKIV*RARTTCWVGNT
Trigger: GGTGTTTCCTACCCAACATGTGGTCCGTGCTCTCCAAACTATCTTTGAGCTGAACGTCCAGGCCTTTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS CAA 90 bp GTGCCTCCATCAGCCAGGAAGTATAGTTCATTGAACAGCGCAGATTaGTACCAGGCAGGCAGTGATCTGTCATCCAATACCGGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: VPPSARKYSSLNSAD*YQAGSDLSSNTGLC
Trigger: GCAGAGCCCGGTATTGGATGACAGATCACTGCCTGCCTGGTACAAATCTGCGCTGTTCAATGAACTATACTTCCTGGCTGATGGAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS TCA 72 bp CACACTGTGAATTGGTCAGCGATGACTGTCCGGTGCTaGTACATTCCAGGGTTAAGCTGCCAACGACAGAAC +
Preference number: 6 (lower is better)
Translates to: HTVNWSAMTVRC*YIPGLSCQRQN
Trigger: GTTCTGTCGTTGGCAGCTTAACCCTGGAATGTATCAGCACCGGACAGTCATCGCTGACCAATTCACAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378094.4
ENST00000378103.7
CDS TCA 72 bp CGTCTCCACCACCCAGTCCATTCCGCATGGAGAACATaGTGGACACATCTAGAGCTTCGTCCCCTTCATTTT +
Preference number: 6 (lower is better)
Translates to: RLHHPVHSAWRT*WTHLELRPLHF
Trigger: AAAATGAAGGGGACGAAGCTCTAGATGTGTCCATCATGTTCTCCATGCGGAATGGACTGGGTGGTGGAGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS TCA 72 bp CAGATTCCATCACAGCCTAGAGAGGGACCAAGATGTTaGAGACCTAGGTACCGAGGAAAGGCAACAACCAGC +
Preference number: 6 (lower is better)
Translates to: QIPSQPREGPRC*RPRYRGKATTS
Trigger: GCTGGTTGTTGCCTTTCCTCGGTACCTAGGTCTTCAACATCTTGGTCCCTCTCTAGGCTGTGATGGAATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488292.1
CDS TCA 72 bp AGTGTCCTCATTTGGTCAGCGATGACTGTCCGGTGCTaGTACATTCCAGGGTTAAGCTGCCAACGACAGAAC +
Preference number: 6 (lower is better)
Translates to: SVLIWSAMTVRC*YIPGLSCQRQN
Trigger: GTTCTGTCGTTGGCAGCTTAACCCTGGAATGTATCAGCACCGGACAGTCATCGCTGACCAAATGAGGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485259.1
CDS GCA 72 bp ATGAGTCATTCTTTCTTGAGCCCTACAATCCCTTGTTaGCCAGTTTCTCACCTCAGGCCTCCTGGAAACCCC +
Preference number: 6 (lower is better)
Translates to: MSHSFLSPTIPC*PVSHLRPPGNP
Trigger: GGGGTTTCCAGGAGGCCTGAGGTGAGAAACTGGGCAACAAGGGATTGTAGGGCTCAAGAAAGAATGACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000486797.1
ENST00000488292.1
CDS CAA 72 bp TCCTGCAAAGGCCTGGACGTTCAGCTCAAAGATAGTTaGGAGAGCACGGACCACATGTTGGGTAGGAAACAC +
Preference number: 6 (lower is better)
Translates to: SCKGLDVQLKDS*ESTDHMLGRKH
Trigger: GTGTTTCCTACCCAACATGTGGTCCGTGCTCTCCAAACTATCTTTGAGCTGAACGTCCAGGCCTTTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
CDS CAA 72 bp ATAGCGGCCATTCCACAGCAGTCTCTCATAGGCTTCTaGGCCCCGGCTGAGGATAGAAGAAAACTTATCCTG +
Preference number: 6 (lower is better)
Translates to: IAAIPQQSLIGF*APAEDRRKLIL
Trigger: CAGGATAAGTTTTCTTCTATCCTCAGCCGGGGCCAAGAAGCCTATGAGAGACTGCTGTGGAATGGCCGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CAA 90 bp GTAATAGACAATGAGTCATTCTTTCTTGAGCCCTACAATCCCTTGTaGCCCAGTTTCTCACCTCAGGCCTCCTGGAAACCCCTACCCGCT +
Preference number: 6 (lower is better)
Translates to: VIDNESFFLEPYNPL*PSFSPQASWKPLPA
Trigger: AGCGGGTAGGGGTTTCCAGGAGGCCTGAGGTGAGAAACTGGGCAACAAGGGATTGTAGGGCTCAAGAAAGAATGACTCATTGTCTATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000486797.1
ENST00000488292.1
CDS CAA 90 bp CGTGTAATAGACAATGAGTCATTCTTTCTTGAGCCCTACAATCCCTaGTTGCCCAGTTTCTCACCTCAGGCCTCCTGGAAACCCCTACCC +
Preference number: 6 (lower is better)
Translates to: RVIDNESFFLEPYNP*LPSFSPQASWKPLP
Trigger: GGGTAGGGGTTTCCAGGAGGCCTGAGGTGAGAAACTGGGCAACAAGGGATTGTAGGGCTCAAGAAAGAATGACTCATTGTCTATTACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000486797.1
ENST00000488292.1
CDS TCA 72 bp ACACTGTGCCTCCATCAGCCAGGAAGTATAGTTCATTaGACAGCGCAGATTTGTACCAGGCAGGCAGTGATC +
Preference number: 6 (lower is better)
Translates to: TLCLHQPGSIVH*TAQICTRQAVI
Trigger: GATCACTGCCTGCCTGGTACAAATCTGCGCTGTTCAATGAACTATACTTCCTGGCTGATGGAGGCACAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CAA 72 bp GAACTCACCATTCCACAGCAGTCTCTCATAGGCTTCTaGGCCCCGGCTGAGGATAGAAGAAAACTTATCCTG +
Preference number: 6 (lower is better)
Translates to: ELTIPQQSLIGF*APAEDRRKLIL
Trigger: CAGGATAAGTTTTCTTCTATCCTCAGCCGGGGCCAAGAAGCCTATGAGAGACTGCTGTGGAATGGTGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378088.1
ENST00000486797.1
CDS CAA 72 bp CACACTGTGCCTCCATCAGCCAGGAAGTATAGTTCATaGAACAGCGCAGATTTGTACCAGGCAGGCAGTGAT +
Preference number: 6 (lower is better)
Translates to: HTVPPSARKYSS*NSADLYQAGSD
Trigger: ATCACTGCCTGCCTGGTACAAATCTGCGCTGTTCAATGAACTATACTTCCTGGCTGATGGAGGCACAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CAA 90 bp GACGGACAAGATGGCATTGGGTTATGCCTTGAAGAAATTTGGTGGTaGAGGAAGTTTTCTGGGCCAGGATACAGATGGTGGAGAGATGGG +
Preference number: 6 (lower is better)
Translates to: DGQDGIGLCLEEIWW*RKFSGPGYRWWRDG
Trigger: CCCATCTCTCCACCATCTGTATCCTGGCCCAGAAAACTTCCTCAACCACCAAATTTCTTCAAGGCATAACCCAATGCCATCTTGTCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS CAA 90 bp ATAGTTGTAATAGCGGCCATTCCACAGCAGTCTCTCATAGGCTTCTaGGCCCCGGCTGAGGATAGAAGAAAACTTATCCTGGATGTCCTG +
Preference number: 6 (lower is better)
Translates to: IVVIAAIPQQSLIGF*APAEDRRKLILDVL
Trigger: CAGGACATCCAGGATAAGTTTTCTTCTATCCTCAGCCGGGGCCAAGAAGCCTATGAGAGACTGCTGTGGAATGGCCGCTATTACAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS TCA 72 bp CAGGCCACATGTCCTTCAGGAAGTTTTGATCACCCGTaGGGTAATAGTCCCGATAAACCTGCAGCACAAACT +
Preference number: 6 (lower is better)
Translates to: QATCPSGSFDHP*GNSPDKPAAQT
Trigger: AGTTTGTGCTGCAGGTTTATCGGGACTATTACCTCACGGGTGATCAAAACTTCCTGAAGGACATGTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000486797.1
ENST00000488292.1
CDS CCA 72 bp TGGTTGAGGAAGTTTTCTGGGCCAGGATACAGATGGTaGAGAGATGGGAAAAGGAGTGCATTACCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: WLRKFSGPGYRW*RDGKRSALPLG
Trigger: TCCAAGAGGTAATGCACTCCTTTTCCCATCTCTCCACCATCTGTATCCTGGCCCAGAAAACTTCCTCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378088.1
CDS CAA 72 bp GACAATGAGTCATTCTTTCTTGAGCCCTACAATCCCTaGTTGCCCAGTTTCTCACCTCAGGCCTCCTGGAAA +
Preference number: 6 (lower is better)
Translates to: DNESFFLEPYNP*LPSFSPQASWK
Trigger: TTTCCAGGAGGCCTGAGGTGAGAAACTGGGCAACAAGGGATTGTAGGGCTCAAGAAAGAATGACTCATTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378088.1
ENST00000486797.1
ENST00000488292.1
CDS CAA 90 bp AGGTTCAGGTCCTTCCAATCAGCAGTATCATGGATTAAATATGCATaGACGCGGAGCCATGGTTCATCATCTGGGTCCCCAATATCATGG +
Preference number: 6 (lower is better)
Translates to: RFRSFQSAVSWIKYA*TRSHGSSSGSPISW
Trigger: CCATGATATTGGGGACCCAGATGATGAACCATGGCTCCGCGTCAATGCATATTTAATCCATGATACTGCTGATTGGAAGGACCTGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000486797.1
ENST00000488292.1
CDS TCA 72 bp CCTTCCAATCAGCAGTATCATGGATTAAATATGCATTaGCGCGGAGCCATGGTTCATCATCTGGGTCCCCAA +
Preference number: 6 (lower is better)
Translates to: PSNQQYHGLNMH*RGAMVHHLGPQ
Trigger: TTGGGGACCCAGATGATGAACCATGGCTCCGCGTCAATGCATATTTAATCCATGATACTGCTGATTGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000486797.1
ENST00000488292.1
CDS GCA 72 bp TACCACCACTGCAGGTACCTCAAGCCCATGCCTATATaGTTTATCATGTTGCTTAGGGAGACGTTGTTAGCT +
Preference number: 6 (lower is better)
Translates to: YHHCRYLKPMPI*FIMLLRETLLA
Trigger: AGCTAACAACGTCTCCCTAAGCAACATGATAAAGCATATAGGCATGGGCTTGAGGTACCTGCAGTGGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000489025.1
CDS GCA 72 bp AGGAAGCATAAAAGTGGACATCATATGTGTTGTACATaGGGTACTCCTGGCCCTCAAGGTAGCCAAATCGAC +
Preference number: 6 (lower is better)
Translates to: RKHKSGHHMCCT*GTPGPQGSQID
Trigger: GTCGATTTGGCTACCTTGAGGGCCAGGAGTACCGCATGTACAACACATATGATGTCCACTTTTATGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CAA 72 bp TCAGCCAGGAAGTATAGTTCATTGAACAGCGCAGATTaGTACCAGGCAGGCAGTGATCTGTCATCCAATACC +
Preference number: 6 (lower is better)
Translates to: SARKYSSLNSAD*YQAGSDLSSNT
Trigger: GGTATTGGATGACAGATCACTGCCTGCCTGGTACAAATCTGCGCTGTTCAATGAACTATACTTCCTGGCTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
CDS CAA 72 bp TCCTTCCAATCAGCAGTATCATGGATTAAATATGCATaGACGCGGAGCCATGGTTCATCATCTGGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: SFQSAVSWIKYA*TRSHGSSSGSP
Trigger: TGGGGACCCAGATGATGAACCATGGCTCCGCGTCAATGCATATTTAATCCATGATACTGCTGATTGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000486797.1
ENST00000488292.1
CDS TCA 72 bp CATCATAGGTCTGGTCTGCATAGCCTCCATTTTCAATaGGTCCATCATGGTCCTTGTCAAACTTCATTTCAG +
Preference number: 6 (lower is better)
Translates to: HHRSGLHSLHFQ*VHHGPCQTSFQ
Trigger: CTGAAATGAAGTTTGACAAGGACCATGATGGACTCATTGAAAATGGAGGCTATGCAGACCAGACCTATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378088.1
ENST00000378094.4
ENST00000378103.7
ENST00000467252.5
ENST00000486797.1
ENST00000488292.1
CDS GCA 72 bp GGAGGCTTTATAGACGGACAAGATGGCATTGGGTTATaGCTTGAAGAAATTTGGTGGTTGAGGAAGTTTTCT +
Preference number: 6 (lower is better)
Translates to: GGFIDGQDGIGL*LEEIWWLRKFS
Trigger: AGAAAACTTCCTCAACCACCAAATTTCTTCAAGGCATAACCCAATGCCATCTTGTCCGTCTATAAAGCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378088.1