Pregenerated sensors for GBA (Homo sapiens)
Ensembl gene IDs: ENSG00000177628Ensembl transcript IDs: ENST00000327247.9, ENST00000368373.8, ENST00000427500.7, ENST00000428024.3, ENST00000464536.1, ENST00000470104.1, ENST00000478472.1, ENST00000484489.5, ENST00000571897.1, ENST00000572338.5, ENST00000573492.1, ENST00000574670.5, ENST00000574935.1, ENST00000576421.5, ENST00000613861.4, ENST00000618489.1
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 72 bp | GAGGTGAGGAGTTTGAGACCTGCCTTGCCAGCATGGTaGAACCCCGTCTCTACTGATGCCCACGACACTGCC | + |
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Preference number: 6 (lower is better) Translates to: EVRSLRPALPAW*NPVSTDAHDTA Trigger: GGCAGTGTCGTGGGCATCAGTAGAGACGGGGTTTCACCATGCTGGCAAGGCAGGTCTCAAACTCCTCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000470104.1 ENST00000573492.1 |
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| CDS CAA 90 bp | GTGATGTCTACAATGATGGGACTGTCGACAAAGTTACGCACCCAATaGGGTCCTCCTTCGGGGTTCAGGGCAAGGTTCCAGTCGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VMSTMMGLSTKLRTQ*GPPSGFRARFQSVQ Trigger: CTGGACCGACTGGAACCTTGCCCTGAACCCCGAAGGAGGACCCAATTGGGTGCGTAACTTTGTCGACAGTCCCATCATTGTAGACATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000327247.9 ENST00000368373.8 ENST00000427500.7 ENST00000428024.3 ENST00000464536.1 ENST00000478472.1 ENST00000484489.5 ENST00000571897.1 ENST00000572338.5 ENST00000574670.5 ENST00000574935.1 ENST00000576421.5 ENST00000613861.4 ENST00000618489.1 |
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| CDS CAA 72 bp | ACAATGATGGGACTGTCGACAAAGTTACGCACCCAATaGGGTCCTCCTTCGGGGTTCAGGGCAAGGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: TMMGLSTKLRTQ*GPPSGFRARFQ Trigger: CTGGAACCTTGCCCTGAACCCCGAAGGAGGACCCAATTGGGTGCGTAACTTTGTCGACAGTCCCATCATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000327247.9 ENST00000368373.8 ENST00000427500.7 ENST00000428024.3 ENST00000464536.1 ENST00000478472.1 ENST00000484489.5 ENST00000571897.1 ENST00000572338.5 ENST00000574670.5 ENST00000574935.1 ENST00000576421.5 ENST00000613861.4 ENST00000618489.1 |
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