RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GATM (Homo sapiens)

Ensembl gene IDs: ENSG00000171766

Ensembl transcript IDs: ENST00000396659.8, ENST00000458245.5, ENST00000527933.2, ENST00000558118.1, ENST00000558163.1, ENST00000558336.5, ENST00000558362.5, ENST00000558537.5, ENST00000559885.1, ENST00000560538.1, ENST00000561148.5, ENST00000561376.1, ENST00000674905.1, ENST00000675158.1, ENST00000675323.1, ENST00000675701.1, ENST00000675974.1, ENST00000676090.1

Found 496 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACAAGCTCCATCAGGCCTGTTCAGTCCAAGTAGGACTGTAAGGTaGCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTC +
Preference number: 1 (lower is better)
Translates to: PQAPSGLFSPSRTVR*LGAGHRRSSNGSLL
Trigger: GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCCTGATGGAGCTTGTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
3UTR TCA 90 bp AAGGCAGGAATGAGGAGGGATCCACTTGAGCAGGTGGCTGGCAACTaGACTCCAGATGTGCCAAGTTTGAAGTCCTGTGGCAATATCCCG +
Preference number: 1 (lower is better)
Translates to: KAGMRRDPLEQVAGN*TPDVPSLKSCGNIP
Trigger: CGGGATATTGCCACAGGACTTCAAACTTGGCACATCTGGAGTTCAGTTGCCAGCCACCTGCTCAAGTGGATCCCTCCTCATTCCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR TCA 90 bp CACGGTGAAACCCCGTCTCTACTGCTAATCTGCTGTACTAACAGATaGGTCAATAACTGGAATGGGGAATCCTGGAAATGCAGACAAGAG +
Preference number: 1 (lower is better)
Translates to: HGETPSLLLICCTNR*VNNWNGESWKCRQE
Trigger: CTCTTGTCTGCATTTCCAGGATTCCCCATTCCAGTTATTGACTCATCTGTTAGTACAGCAGATTAGCAGTAGAGACGGGGTTTCACCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR CCA 90 bp TGGACTAACATGACGATTCTCATAGAGAAAGTAGGCCTACAGACTTaGAGGAGTCCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGA +
Preference number: 1 (lower is better)
Translates to: WTNMTILIEKVGLQT*RSPVVLILKDTQPR
Trigger: TCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGGACTCCTCCAAGTCTGTAGGCCTACTTTCTCTATGAGAATCGTCATGTTAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR CCA 90 bp AATGGTAGTGATACCTGCATTGAAAGAGAGATGAGGTCAGTTAGATaGACTAACATGACGATTCTCATAGAGAAAGTAGGCCTACAGACT +
Preference number: 1 (lower is better)
Translates to: NGSDTCIEREMRSVR*TNMTILIEKVGLQT
Trigger: AGTCTGTAGGCCTACTTTCTCTATGAGAATCGTCATGTTAGTCCATCTAACTGACCTCATCTCTCTTTCAATGCAGGTATCACTACCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR CCA 90 bp AAAAATATCTCTTCCAGCTCGAATGAAGTCAGCAGCATCAAAGCATaGCTCAAACTCAGTTGTCACAAATTTTCCCTGAGCAGCCAATTT +
Preference number: 1 (lower is better)
Translates to: KNISSSSNEVSSIKA*LKLSCHKFSLSSQF
Trigger: AAATTGGCTGCTCAGGGAAAATTTGTGACAACTGAGTTTGAGCCATGCTTTGATGCTGCTGACTTCATTCGAGCTGGAAGAGATATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR GCA 90 bp CAGGGAATTGGCATTACGAATGTTAACTTTAATGGTAGTGATACCTaGATTGAAAGAGAGATGAGGTCAGTTAGATGGACTAACATGACG +
Preference number: 1 (lower is better)
Translates to: QGIGITNVNFNGSDT*IEREMRSVRWTNMT
Trigger: CGTCATGTTAGTCCATCTAACTGACCTCATCTCTCTTTCAATGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCCAATTCCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR CCA 90 bp GGCCACCATAAGGAAACAATGGAACAGAGCTGGTGTTTTAATATCTaGGTTTGTATGGTTATACAGGTACCAAAGCAAATCCAACAATCA +
Preference number: 1 (lower is better)
Translates to: GHHKETMEQSWCFNI*VCMVIQVPKQIQQS
Trigger: TGATTGTTGGATTTGCTTTGGTACCTGTATAACCATACAAACCCAGATATTAAAACACCAGCTCTGTTCCATTGTTTCCTTATGGTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR CCA 90 bp AGATTAACTTCACCAGGCCACCATAAGGAAACAATGGAACAGAGCTaGTGTTTTAATATCTGGGTTTGTATGGTTATACAGGTACCAAAG +
Preference number: 1 (lower is better)
Translates to: RLTSPGHHKETMEQS*CFNIWVCMVIQVPK
Trigger: CTTTGGTACCTGTATAACCATACAAACCCAGATATTAAAACACCAGCTCTGTTCCATTGTTTCCTTATGGTGGCCTGGTGAAGTTAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR GCA 90 bp TTCGCTACTTTGTTAACTATGCTTATCACACATAAAAGTCACTTCTaGATCCGTACCCTTTTGAGTCCTTTGAAATATGTGATGACAGGA +
Preference number: 1 (lower is better)
Translates to: FATLLTMLITHKSHF*IRTLLSPLKYVMTG
Trigger: TCCTGTCATCACATATTTCAAAGGACTCAAAAGGGTACGGATGCAGAAGTGACTTTTATGTGTGATAAGCATAGTTAACAAAGTAGCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR CCA 90 bp AGGAAACAATGGAACAGAGCTGGTGTTTTAATATCTGGGTTTGTATaGTTATACAGGTACCAAAGCAAATCCAACAATCAGTTTAATCTG +
Preference number: 1 (lower is better)
Translates to: RKQWNRAGVLISGFV*LYRYQSKSNNQFNL
Trigger: CAGATTAAACTGATTGTTGGATTTGCTTTGGTACCTGTATAACCATACAAACCCAGATATTAAAACACCAGCTCTGTTCCATTGTTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR-3UTR TCA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGGGTCTGGGAGTAAGCTaGAGGGAAAGCAGTCAGAGG +
Preference number: 2 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGGLGVS*RESSQR
Trigger: CCTCTGACTGCTTTCCCTTCAGCTTACTCCCAGACC...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR TCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGCTTCTTAGGTGTATCTaGGGCCAGCCACAAGCTCCA +
Preference number: 2 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRLLRCI*GQPQAP
Trigger: TGGAGCTTGTGGCTGGCCTCAGATACACCTAAGAAG...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
3UTR-3UTR CCA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGATACCTGCAAAGGGGTaGTTTTCTGCACATGGGCAC +
Preference number: 2 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGIPAKG*FSAHGH
Trigger: GTGCCCATGTGCAGAAAACCACCCCTTTGCAGGTAT...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
3UTR-3UTR TCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCTTCTTAGGTGTATCTaGGGCCAGCCACAAGCTCCA +
Preference number: 2 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPLLRCI*GQPQAP
Trigger: TGGAGCTTGTGGCTGGCCTCAGATACACCTAAGAAG...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
3UTR-3UTR TCA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGTTTAAAGCAGGAGAATaGACCTTGCCCCTAAGCTTC +
Preference number: 2 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGFKAGE*TLPLSF
Trigger: GAAGCTTAGGGGCAAGGTTCATTCTCCTGCTTTAAA...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
3UTR-3UTR TCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCTTTAAAGCAGGAGAATaGACCTTGCCCCTAAGCTTC +
Preference number: 2 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPFKAGE*TLPLSF
Trigger: GAAGCTTAGGGGCAAGGTTCATTCTCCTGCTTTAAA...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
3UTR-3UTR TCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGCCCCTGTTAAGGAGATaGTTGTTTAAAGCACTACAG +
Preference number: 2 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRPLLRR*LFKALQ
Trigger: CTGTAGTGCTTTAAACAATCATCTCCTTAACAGGGG...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
3UTR-3UTR TCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCTTTAAAGCAGGAGAATaGACCTTGCCCCTAAGCTTC +
Preference number: 2 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLFKAGE*TLPLSF
Trigger: GAAGCTTAGGGGCAAGGTTCATTCTCCTGCTTTAAA...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
3UTR-3UTR GCA 90 bp ACGCCATGCCATGGGAGCCTCGATAATCTCATTGCCCACAACTATCAGGATGTCAGTAGGACTGTAAGGTaGCTCGGCGCCGGACATCGC +
Preference number: 2 (lower is better)
Translates to: TPCHGSLDNLIAHNYQDVSRTVR*LGAGHR
Trigger: GCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACT...GACATCCTGATAGTTGTGGGCAATGAGATTATCGAGGCTCCCATGGCATGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR TCA 90 bp AATGACCAGTCAATGGGGTCAGGCCTCCTTACTGTCACTCCTTCCGTTTTTAAAGAGGAGGGATCCACTTaGGCAGGTGGCTGGCAACTG +
Preference number: 2 (lower is better)
Translates to: NDQSMGSGLLTVTPSVFKEEGST*AGGWQL
Trigger: CAGTTGCCAGCCACCTGCTCAAGTGGATCCCTCCTC...TTTAAAAACGGAAGGAGTGACAGTAAGGAGGCCTGACCCCATTGACTGGTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR GCA 90 bp AGGTGGCATGAGCCATTCAGAAAGACTTTCCTAGTCGCGCATGGTAGCTCACACCTCAGGAGCTCAGGATaGATCTCCAACTTGTTGGGG +
Preference number: 2 (lower is better)
Translates to: RWHEPFRKTFLVAHGSSHLRSSG*ISNLLG
Trigger: CCCCAACAAGTTGGAGATGCATCCTGAGCTCCTGAG...GTGTGAGCTACCATGCGCGACTAGGAAAGTCTTTCTGAATGGCTCATGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR CAA 90 bp CGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGAATaGGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAG +
Preference number: 2 (lower is better)
Translates to: RRTSQVQQWKPPPRE*ALRMLTLMVVIPAK
Trigger: CTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCCAATTCCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674905.1
3UTR CAA 90 bp CGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGAATaGGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCATTG +
Preference number: 2 (lower is better)
Translates to: RRTSQVQQWKPPPRE*ALRMLTLMVVIPAL
Trigger: CAATGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCCAATTCCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR CAA 90 bp CGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGAATaGGCATTACGAATGTTAACTTTAATGGTAGTGATACCCAGCTTT +
Preference number: 2 (lower is better)
Translates to: RRTSQVQQWKPPPRE*ALRMLTLMVVIPSF
Trigger: AAAGCTGGGTATCACTACCATTAAAGTTAACATTCGTAATGCCAATTCCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675158.1
ENST00000676090.1
3UTR-3UTR CCA 90 bp GAATCCAAGGGAAGAGCTTCAGGAAGCTCTTCAGGAAGGAAGCAATTATCATTGGGAGGCCAAGGCGTGTaGATCACGAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: ESKGRASGSSSGRKQLSLGGQGV*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACACGCCTTGGCCTCC...CAATGATAATTGCTTCCTTCCTGAAGAGCTTCCTGAAGCTCTTCCCTTGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR CCA 90 bp CTGTACGCTCGGTACTCAAAGAAGCGTGAACGCCATGCCATGGGAGCCTCGATAAAGTTTGAAGTCCTGTaGCAATATCCCGTAAGGAGT +
Preference number: 2 (lower is better)
Translates to: LYARYSKKRERHAMGASIKFEVL*QYPVRS
Trigger: ACTCCTTACGGGATATTGCCACAGGACTTCAAACTT...TATCGAGGCTCCCATGGCATGGCGTTCACGCTTCTTTGAGTACCGAGCGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR GCA 90 bp ATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCATATGTGTTGGCCCCTaGAATCCCAGCACTTTGGGA +
Preference number: 2 (lower is better)
Translates to: MPSLLLVKWPVLFICVGPICVGP*NPSTLG
Trigger: TCCCAAAGTGCTGGGATTGCAGGGGCCAACACATAT...GGGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
3UTR-3UTR GCA 90 bp CCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTCTTCCAAGTAGGACTGTAAGGTaGCTCGGCGCCGGACATCGC +
Preference number: 2 (lower is better)
Translates to: PVVLILKDTQPRIVFSLPSRTVR*LGAGHR
Trigger: GCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACT...TGGAAGAGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR CAA 90 bp TCAAAGAAGCGTGAACGCCATGCCATGGGAGCCTCGATAATCTCATaGCCCACAACTATCAGGATGTCTCGAGGCATTGCACTGTATAAA +
Preference number: 2 (lower is better)
Translates to: SKKRERHAMGASIIS*PTTIRMSRGIALYK
Trigger: TTTATACAGTGCAATGCCTCGAGACATCCTGATAGTTGTGGGCAATGAGATTATCGAGGCTCCCATGGCATGGCGTTCACGCTTCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR TCA 90 bp ACGCCATGCCATGGGAGCCTCGATAATCTCATTGCCCACAACTATCAGGATGTCTGCTGTACTAACAGATaGGTCAATAACTGGAATGGG +
Preference number: 2 (lower is better)
Translates to: TPCHGSLDNLIAHNYQDVCCTNR*VNNWNG
Trigger: CCCATTCCAGTTATTGACTCATCTGTTAGTACAGCA...GACATCCTGATAGTTGTGGGCAATGAGATTATCGAGGCTCCCATGGCATGGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR CCA 90 bp AATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGGGAGGCCAAGGCGTGTaGATCACGAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: NNALLASGKMASTFHMCWGGQGV*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACACGCCTTGGCCTCC...CCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
3UTR-3UTR TCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACCTTCTTAGGTGTATCTaGGGCCAGCCACAAGCTCCA +
Preference number: 2 (lower is better)
Translates to: FINLLLRGCLRSSGCISNLLRCI*GQPQAP
Trigger: TGGAGCTTGTGGCTGGCCTCAGATACACCTAAGAAG...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
3UTR-3UTR TCA 90 bp CCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTCTTCCACTTCTTAGGTGTATCTaGGGCCAGCCACAAGCTCCA +
Preference number: 2 (lower is better)
Translates to: PVVLILKDTQPRIVFSLPLLRCI*GQPQAP
Trigger: TGGAGCTTGTGGCTGGCCTCAGATACACCTAAGAAG...TGGAAGAGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR-3UTR GCA 90 bp AGGAGTCCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTGCTGAACAAGCTATCTaGTCACCTGCAAAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: RSPVVLILKDTQPRIVFSAEQAI*SPAKGW
Trigger: CCACCCCTTTGCAGGTGAGCAGATAGCTTGTTCAGC...AGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR CAA 90 bp AGAATGGCTAAGAGAAGGGGGCTGAAAGTAATATTCTGTTCAACCTaGCCATTACAGGCTGTGACGGAAGAAGATCTGAGGACAGTGAAA +
Preference number: 2 (lower is better)
Translates to: RMAKRRGLKVIFCST*PLQAVTEEDLRTVK
Trigger: TTTCACTGTCCTCAGATCTTCTTCCGTCACAGCCTGTAATGGCAAGGTTGAACAGAATATTACTTTCAGCCCCCTTCTCTTAGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR TCA 90 bp AGTCCATCCTGCTTTCTTGAAAAGATCAATCTGGTGACATGGTCGGTCAGGGTTAGTTTTATACTTCAATaGCCAGTCAATGGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: SPSCFLEKINLVTWSVRVSFILQ*PVNGVR
Trigger: CCTGACCCCATTGACTGGTCATTGAAGTATAAAACT...AACCCTGACCGACCATGTCACCAGATTGATCTTTTCAAGAAAGCAGGATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR CCA 90 bp CAGCTGCCAGGTGATTTGGTGAGAAGAGTGAGTAGGAGTGACCAGTTAGGAGTTAAAGAGACAATTACCTaGTTCTACTTAGGATCTGTG +
Preference number: 2 (lower is better)
Translates to: QLPGDLVRRVSRSDQLGVKETIT*FYLGSV
Trigger: CACAGATCCTAAGTAGAACCAGGTAATTGTCTCTTT...AACTCCTAACTGGTCACTCCTACTCACTCTTCTCACCAAATCACCTGGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCGTGGTTTTCTGCACATaGGCACCAAAACGTTGGCTA +
Preference number: 2 (lower is better)
Translates to: RFINLLLRGCLRSSGCISVVFCT*APKRWL
Trigger: TAGCCAACGTTTTGGTGCCCATGTGCAGAAAACCAC...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
3UTR-3UTR CCA 90 bp CCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTCTTCCATATGGGAGGCATAGGTaGATGGATCACTTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: PVVLILKDTQPRIVFSLPYGRHR*MDHLRS
Trigger: TGACCTCAAGTGATCCATCCACCTATGCCTCCCATA...TGGAAGAGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR-3UTR TCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCTTCTTAGGTGTATCTaGGGCCAGCCACAAGCTCCA +
Preference number: 2 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFLLRCI*GQPQAP
Trigger: TGGAGCTTGTGGCTGGCCTCAGATACACCTAAGAAG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
3UTR-3UTR TCA 90 bp CATCCGTACCCTTTTGAGTCCTTTGAAATATGTGATGACAGGACACTTTTAAAGTATTTGAAGAAGGGCTaGACAAGCTATCTGCTCACC +
Preference number: 2 (lower is better)
Translates to: HPYPFESFEICDDRTLLKYLKKG*TSYLLT
Trigger: GGTGAGCAGATAGCTTGTTCAGCCCTTCTTCAAATA...CTTTAAAAGTGTCCTGTCATCACATATTTCAAAGGACTCAAAAGGGTACGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR-3UTR CCA 90 bp AATGACCAGTCAATGGGGTCAGGCCTCCTTACTGTCACTCCTTCCGTTTTTAAAAAACATCTTTTGAATTaGAACTTCATTGGCATCCAC +
Preference number: 2 (lower is better)
Translates to: NDQSMGSGLLTVTPSVFKKHLLN*NFIGIH
Trigger: GTGGATGCCAATGAAGTTCCAATTCAAAAGATGTTT...TTTAAAAACGGAAGGAGTGACAGTAAGGAGGCCTGACCCCATTGACTGGTCATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR TCA 90 bp CATCCGTACCCTTTTGAGTCCTTTGAAATATGTGATGACAGGACACTTTTAAAGCCCCTGTTAAGGAGATaGTTGTTTAAAGCACTACAG +
Preference number: 2 (lower is better)
Translates to: HPYPFESFEICDDRTLLKPLLRR*LFKALQ
Trigger: CTGTAGTGCTTTAAACAATCATCTCCTTAACAGGGG...CTTTAAAAGTGTCCTGTCATCACATATTTCAAAGGACTCAAAAGGGTACGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGTGGTTTTCTGCACATaGGCACCAAAACGTTGGCTA +
Preference number: 2 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFVVFCT*APKRWL
Trigger: TAGCCAACGTTTTGGTGCCCATGTGCAGAAAACCAC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
3UTR-3UTR TCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTTTTAAAGCAGGAGAATaGACCTTGCCCCTAAGCTTC +
Preference number: 2 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFFKAGE*TLPLSF
Trigger: GAAGCTTAGGGGCAAGGTTCATTCTCCTGCTTTAAA...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
3UTR-3UTR TCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCCCCTGTTAAGGAGATaGTTGTTTAAAGCACTACAG +
Preference number: 2 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFPLLRR*LFKALQ
Trigger: CTGTAGTGCTTTAAACAATCATCTCCTTAACAGGGG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
3UTR-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAAACATCTTTTGAATTaGAACTTCATTGGCATCCAC +
Preference number: 2 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFKHLLN*NFIGIH
Trigger: GTGGATGCCAATGAAGTTCCAATTCAAAAGATGTTT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675158.1
ENST00000676090.1
3UTR GCA 72 bp CCATCAGGCCTGTTCAGTCCAAGTAGGACTGTAAGGTaGCTCGGCGCCGGACATCGCAGGTCCAGCAATGGA +
Preference number: 3 (lower is better)
Translates to: PSGLFSPSRTVR*LGAGHRRSSNG
Trigger: TCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCCTGATGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
3UTR CCA 72 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATaGAAGCCTCCTCCCAGGGAATTGGCATTACGAATG +
Preference number: 3 (lower is better)
Translates to: KVPRRRTSQVQQ*KPPPRELALRM
Trigger: CATTCGTAATGCCAATTCCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
3UTR-3UTR CAA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGGGATGCATCTCCAACTaGTTGGGGCTACGTGTGTTG +
Preference number: 3 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRGCISN*LGLRVL
Trigger: CAACACACGTAGCCCCAACAAGTTGGAGATGCATCC...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR GCA 72 bp CGGCAGGAGAATCGCTTGAACCCAGAAAGTGTAGGTTaGAGTGAGCCGAGGTCACGCCACTACACTACAGCC +
Preference number: 3 (lower is better)
Translates to: RQENRLNPESVG*SEPRSRHYTTA
Trigger: GGCTGTAGTGTAGTGGCGTGACCTCGGCTCACTGCAACCTACACTTTCTGGGTTCAAGCGATTCTCCTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR TCA 72 bp ATGAGGAGGGATCCACTTGAGCAGGTGGCTGGCAACTaGACTCCAGATGTGCCAAGTTTGAAGTCCTGTGGC +
Preference number: 3 (lower is better)
Translates to: MRRDPLEQVAGN*TPDVPSLKSCG
Trigger: GCCACAGGACTTCAAACTTGGCACATCTGGAGTTCAGTTGCCAGCCACCTGCTCAAGTGGATCCCTCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR CAA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCATGGGCACCAAAACGTaGGCTAAGTCATATAAGATT +
Preference number: 3 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLMGTKT*AKSYKI
Trigger: AATCTTATATGACTTAGCCAACGTTTTGGTGCCCAT...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
3UTR-3UTR CAA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCAAACATCTTTTGAATaGGAACTTCATTGGCATCCA +
Preference number: 3 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPQTSFE*ELHWHP
Trigger: TGGATGCCAATGAAGTTCCAATTCAAAAGATGTTTG...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675158.1
ENST00000676090.1
3UTR-3UTR CAA 90 bp CTGTACGCTCGGTACTCAAAGAAGCGTGAACGCCATGCCATGGGAGCCTCGATAAAAATAATGCCCTCCTaGCTTCTGGTAAAATGGCCA +
Preference number: 3 (lower is better)
Translates to: LYARYSKKRERHAMGASIKIMPS*LLVKWP
Trigger: TGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTT...TATCGAGGCTCCCATGGCATGGCGTTCACGCTTCTTTGAGTACCGAGCGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR CAA 90 bp CAGCTGCCAGGTGATTTGGTGAGAAGAGTGAGTAGGAGTGACCAGTTAGGAGTTTACTTTTCATATGTGTaGGCCCCTGCAATCCCAGCA +
Preference number: 3 (lower is better)
Translates to: QLPGDLVRRVSRSDQLGVYFSYV*APAIPA
Trigger: TGCTGGGATTGCAGGGGCCAACACATATGAAAAGTA...AACTCCTAACTGGTCACTCCTACTCACTCTTCTCACCAAATCACCTGGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR-3UTR CAA 90 bp ATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCAAAATAATGCCCTCCTaGCTTCTGGTAAAATGGCCA +
Preference number: 3 (lower is better)
Translates to: MPSLLLVKWPVLFICVGPKIMPS*LLVKWP
Trigger: TGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTT...GGGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
3UTR TCA 72 bp ACCCCGTCTCTACTGCTAATCTGCTGTACTAACAGATaGGTCAATAACTGGAATGGGGAATCCTGGAAATGC +
Preference number: 3 (lower is better)
Translates to: TPSLLLICCTNR*VNNWNGESWKC
Trigger: GCATTTCCAGGATTCCCCATTCCAGTTATTGACTCATCTGTTAGTACAGCAGATTAGCAGTAGAGACGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR CCA 72 bp TCTTCCAGCTCGAATGAAGTCAGCAGCATCAAAGCATaGCTCAAACTCAGTTGTCACAAATTTTCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: SSSSNEVSSIKA*LKLSCHKFSLS
Trigger: GCTCAGGGAAAATTTGTGACAACTGAGTTTGAGCCATGCTTTGATGCTGCTGACTTCATTCGAGCTGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR CCA 72 bp CATCCAGAGTGGATGATCGTCTGGGATGATTGGTGTTaGAGGAGTAATGATAGTCCATCCTGCTTTCTTGAA +
Preference number: 3 (lower is better)
Translates to: HPEWMIVWDDWC*RSNDSPSCFLE
Trigger: TTCAAGAAAGCAGGATGGACTATCATTACTCCTCCAACACCAATCATCCCAGACGATCATCCACTCTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR CCA 72 bp ATGACGATTCTCATAGAGAAAGTAGGCCTACAGACTTaGAGGAGTCCTGTGGTTCTAATCCTTAAGGATACC +
Preference number: 3 (lower is better)
Translates to: MTILIEKVGLQT*RSPVVLILKDT
Trigger: GGTATCCTTAAGGATTAGAACCACAGGACTCCTCCAAGTCTGTAGGCCTACTTTCTCTATGAGAATCGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR CCA 72 bp CAAAATCAGGAGTTTTATACTTCAATGACCAGTCAATaGGGTCAGGCCTCCTTACTGTCACTCCTTCCGTTT +
Preference number: 3 (lower is better)
Translates to: QNQEFYTSMTSQ*GQASLLSLLPF
Trigger: AAACGGAAGGAGTGACAGTAAGGAGGCCTGACCCCATTGACTGGTCATTGAAGTATAAAACTCCTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR TCA 72 bp AGCACTACAGTTCATGCACTTTTTAAAGCAGGAGAATaGACCTTGCCCCTAAGCTTCTTAGGTGTATCTGAG +
Preference number: 3 (lower is better)
Translates to: STTVHALFKAGE*TLPLSFLGVSE
Trigger: CTCAGATACACCTAAGAAGCTTAGGGGCAAGGTTCATTCTCCTGCTTTAAAAAGTGCATGAACTGTAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
3UTR-3UTR CAA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCCTCCTCCCAGGGAATaGGCATTACGAATGTTAACT +
Preference number: 3 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFPPPRE*ALRMLT
Trigger: AGTTAACATTCGTAATGCCAATTCCCTGGGAGGAGG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
3UTR TCA 72 bp AGAAGCAAACCAGGCTTACGACCCCTGTTAAGGAGATaGTTGTTTAAAGCACTACAGTTCATGCACTTTTTA +
Preference number: 3 (lower is better)
Translates to: RSKPGLRPLLRR*LFKALQFMHFL
Trigger: TAAAAAGTGCATGAACTGTAGTGCTTTAAACAATCATCTCCTTAACAGGGGTCGTAAGCCTGGTTTGCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
3UTR GCA 72 bp ATACCAGGTCCAATGATGTTGAAGGTAGCATCAATATaGATGGGATTGGGATCTTTAAAGGAGATGATATGC +
Preference number: 3 (lower is better)
Translates to: IPGPMMLKVASI*MGLGSLKEMIC
Trigger: GCATATCATCTCCTTTAAAGATCCCAATCCCATGCATATTGATGCTACCTTCAACATCATTGGACCTGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR TCA 72 bp TTAATGGTAGTGATACCCAGCTTTTCAAACATCTTTTaGATTGGAACTTCATTGGCATCCACCATAACACGT +
Preference number: 3 (lower is better)
Translates to: LMVVIPSFSNIF*IGTSLASTITR
Trigger: ACGTGTTATGGTGGATGCCAATGAAGTTCCAATTCAAAAGATGTTTGAAAAGCTGGGTATCACTACCATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675158.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGTCGCCCTGGCCCGGCTaGTCCACGCGCGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGSPWPG*STRGMF
Trigger: GAACATTCCGCGCGTGGACCAGCCGGGCCAGGGCGA...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGCGCGCGGAATGTTCCTaGCCTCTGGGCCGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRRAECS*PLGRVG
Trigger: ACCGACGCGGCCCAGAGGCCAGGAACATTCCGCGCG...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCGCGCGGAATGTTCCTaGCCTCTGGGCCGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLRAECS*PLGRVG
Trigger: ACCGACGCGGCCCAGAGGCCAGGAACATTCCGCGCG...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGCAGGTGGCTGGCAACTaGACTCCAGATGTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGQVAGN*TPDVPS
Trigger: ACTTGGCACATCTGGAGTTCAGTTGCCAGCCACCTG...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCGAGGAGGGATCCACTTaGGCAGGTGGCTGGCAACTG +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPEEGST*AGGWQL
Trigger: CAGTTGCCAGCCACCTGCTCAAGTGGATCCCTCCTC...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR GCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGGAGGAAGCCGTAGCTaGCTGGGTGCTCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRGGSRS*LGALES
Trigger: ACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCC...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGGCTTTGTCGTCAGCTaGACAGGAGTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRGFVVS*TGVPGG
Trigger: TCCTCCCGGAACTCCTGTGCAGCTGACGACAAAGCC...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGAATGTTCCTGGCCTCTaGGCCGCGTCGGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRNVPGL*AASVQA
Trigger: GGCTTGGACCGACGCGGCCCAGAGGCCAGGAACATT...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674905.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGAAGCCGTAGCTGCCTaGGTGCTCTGGAAAGTTCGC +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPREAVAA*VLWKVR
Trigger: GCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTC...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGTGGGCAGAGGCTCAGTaGCTTTGTCGTCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRWAEAQ*LCRQLH
Trigger: GTGCAGCTGACGACAAAGCCACTGAGCCTCTGCCCA...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGGAGCTGTTGTCCACTTaGCGCCACGGTGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGELLST*RHGGSS
Trigger: ACTACTTCCACCGTGGCGCCAAGTGGACAACAGCTC...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGTACTCAAAGAAGCGTaGACGCCATGCCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRVLKEA*TPCHGS
Trigger: GCTCCCATGGCATGGCGTTCACGCTTCTTTGAGTAC...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCGGCTTTGTCGTCAGCTaGACAGGAGTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPGFVVS*TGVPGG
Trigger: TCCTCCCGGAACTCCTGTGCAGCTGACGACAAAGCC...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGAGTAGGACTGTAAGGTaGCTCGGCGCCGGACATCGC +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRSRTVR*LGAGHR
Trigger: GCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACT...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTAGTAGGACTGTAAGGTaGCTCGGCGCCGGACATCGC +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPSRTVR*LGAGHR
Trigger: GCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACT...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGAGCTGTTGTCCACTTaGCGCCACGGTGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRELLST*RHGGSS
Trigger: ACTACTTCCACCGTGGCGCCAAGTGGACAACAGCTC...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCGGAGGCCAAGGCGTGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPGGQGV*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACACGCCTTGGCCTCC...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGAGTTCGAGACCAGCCTaGCCAAGCCCCTCTCTACTA +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRSSRPA*PSPSLL
Trigger: TAGTAGAGAGGGGCTTGGCCAGGCTGGTCTCGAACT...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR TCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCTTCACCTCGATGGTaGACGGTGGAACACAGGCGT +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPPSPRW*TVEHRR
Trigger: ACGCCTGTGTTCCACCGTTCACCATCGAGGTGAAGG...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCGGTCTGGGAGTAAGCTaGAGGGAAAGCAGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPGLGVS*RESSQR
Trigger: CCTCTGACTGCTTTCCCTTCAGCTTACTCCCAGACC...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR GCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTGGAGGAAGCCGTAGCTaGCTGGGTGCTCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPGGSRS*LGALES
Trigger: ACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCC...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCGGAGGAAGCCGTAGCTaGCTGGGTGCTCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLGGSRS*LGALES
Trigger: ACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCC...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGAGCTATCTGCTCACCTaGAAAGGGGTGGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGSYLLT*KGVVFC
Trigger: GCAGAAAACCACCCCTTTGCAGGTGAGCAGATAGCT...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp CTGTACGCTCGGTACTCAAAGAAGCGTGAACGCCATGCCATGGGAGCCTCGATATCGCCCTGGCCCGGCTaGTCCACGCGCGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: LYARYSKKRERHAMGASISPWPG*STRGMF
Trigger: GAACATTCCGCGCGTGGACCAGCCGGGCCAGGGCGA...TATCGAGGCTCCCATGGCATGGCGTTCACGCTTCTTTGAGTACCGAGCGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCGCTGCCTGGGTGCTCTaGAAAGTTCGCTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLAAWVL*KVRCTH
Trigger: ATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGC...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTGCTGCCTGGGTGCTCTaGAAAGTTCGCTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPAAWVL*KVRCTH
Trigger: ATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGC...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCGAAGCCGTAGCTGCCTaGGTGCTCTGGAAAGTTCGC +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLEAVAA*VLWKVR
Trigger: GCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTC...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTGAAGCCGTAGCTGCCTaGGTGCTCTGGAAAGTTCGC +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPEAVAA*VLWKVR
Trigger: GCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTC...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTTGGGCAGAGGCTCAGTaGCTTTGTCGTCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPWAEAQ*LCRQLH
Trigger: GTGCAGCTGACGACAAAGCCACTGAGCCTCTGCCCA...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTAGACAGGGCAGTCCTTaGGCAGAGGCTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPRQGSP*AEAQWL
Trigger: AAGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCT...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGTCAATGACCAGTCAATaGGGTCAGGCCTCCTTACTG +
Preference number: 4 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGSMTSQ*GQASLL
Trigger: CAGTAAGGAGGCCTGACCCCATTGACTGGTCATTGA...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCGCAGGTCCAGCAATaGAAGCCTCCTCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRSQVQQ*KPPPRE
Trigger: TTCCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGA...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTTCGCAGGTCCAGCAATaGAAGCCTCCTCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPSQVQQ*KPPPRE
Trigger: TTCCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGA...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCGTACTCAAAGAAGCGTaGACGCCATGCCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLVLKEA*TPCHGS
Trigger: GCTCCCATGGCATGGCGTTCACGCTTCTTTGAGTAC...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGCTCTTCCAGCTCGAATaGAGTCAGCAGCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRLFQLE*SQQHQS
Trigger: GCTTTGATGCTGCTGACTTCATTCGAGCTGGAAGAG...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRLWKVR*THPVKV
Trigger: AACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAG...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGTCAATGACCAGTCAATaGGGTCAGGCCTCCTTACTG +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRSMTSQ*GQASLL
Trigger: CAGTAAGGAGGCCTGACCCCATTGACTGGTCATTGA...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTGAGCTGTTGTCCACTTaGCGCCACGGTGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPELLST*RHGGSS
Trigger: ACTACTTCCACCGTGGCGCCAAGTGGACAACAGCTC...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGATGCACTCTGTAGTCTaGAGCAAGATGCCTACGCAT +
Preference number: 4 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGMHSVV*SKMPTH
Trigger: ATGCGTAGGCATCTTGCTCCAGACTACAGAGTGCAT...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGATGGTCGGTCAGGGTTaGAAAGCACAATACCAGGTC +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRMVGQG*KAQYQV
Trigger: GACCTGGTATTGTGCTTTCCAACCCTGACCGACCAT...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGATCAATCTGGTGACATaGTCGGTCAGGGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGINLVT*SVRVGK
Trigger: CTTTCCAACCCTGACCGACCATGTCACCAGATTGAT...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGAGTGGATGATCGTCTaGGATGATTGGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPREWMIV*DDWCWR
Trigger: CCTCCAACACCAATCATCCCAGACGATCATCCACTC...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674905.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp ACGCCATGCCATGGGAGCCTCGATAATCTCATTGCCCACAACTATCAGGATGTCCCCCCGCGGCCCCATTaGCTGCCGGGAACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TPCHGSLDNLIAHNYQDVPPRPH*LPGTGG
Trigger: ACCACCTGTTCCCGGCAGCCAATGGGGCCGCGGGGG...GACATCCTGATAGTTGTGGGCAATGAGATTATCGAGGCTCCCATGGCATGGCGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGGTCACAAATTTTCCCTaGGCAGCCAATTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGVTNFP*AANLCL
Trigger: CAGACACAAATTGGCTGCTCAGGGAAAATTTGTGAC...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCTTCTTAGGTGTATCTaGGGCCAGCCACAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLLLRCI*GQPQAP
Trigger: TGGAGCTTGTGGCTGGCCTCAGATACACCTAAGAAG...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGCTTCTTAGGTGTATCTaGGGCCAGCCACAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRLLRCI*GQPQAP
Trigger: TGGAGCTTGTGGCTGGCCTCAGATACACCTAAGAAG...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGCAGATGTGCCAAGTTTaGAGTCCTGTGGCAATATCC +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRQMCQV*SPVAIS
Trigger: GGATATTGCCACAGGACTTCAAACTTGGCACATCTG...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCTCGATGGTGAACGGTaGAACACAGGCGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLLDGER*NTGVFC
Trigger: GCAGAAAACGCCTGTGTTCCACCGTTCACCATCGAG...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGATGCACTCTGTAGTCTaGAGCAAGATGCCTACGCAT +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRMHSVV*SKMPTH
Trigger: ATGCGTAGGCATCTTGCTCCAGACTACAGAGTGCAT...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCATGGTCGGTCAGGGTTaGAAAGCACAATACCAGGTC +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPMVGQG*KAQYQV
Trigger: GACCTGGTATTGTGCTTTCCAACCCTGACCGACCAT...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGATCAATCTGGTGACATaGTCGGTCAGGGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRINLVT*SVRVGK
Trigger: CTTTCCAACCCTGACCGACCATGTCACCAGATTGAT...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGTCACAAATTTTCCCTaGGCAGCCAATTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRVTNFP*AANLCL
Trigger: CAGACACAAATTGGCTGCTCAGGGAAAATTTGTGAC...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGCTCTTCCAGCTCGAATaGAGTCAGCAGCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRLFQLE*SQQHQS
Trigger: GCTTTGATGCTGCTGACTTCATTCGAGCTGGAAGAG...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCTCTTCCAGCTCGAATaGAGTCAGCAGCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLLFQLE*SQQHQS
Trigger: GCTTTGATGCTGCTGACTTCATTCGAGCTGGAAGAG...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAAAAGATCAATCTGGTaGCATGGTCGGTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPKRSIW*HGRSGL
Trigger: CAACCCTGACCGACCATGTCACCAGATTGATCTTTT...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLLWKVR*THPVKV
Trigger: AACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAG...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCATGGTCGGTCAGGGTTaGAAAGCACAATACCAGGTC +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLMVGQG*KAQYQV
Trigger: GACCTGGTATTGTGCTTTCCAACCCTGACCGACCAT...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCATCAATCTGGTGACATaGTCGGTCAGGGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPINLVT*SVRVGK
Trigger: CTTTCCAACCCTGACCGACCATGTCACCAGATTGAT...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGTCATGGAAAGCCATTTaGATGACATCCAGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGSWKAI*MTSRVD
Trigger: ATCCACTCTGGATGTCATCCAAATGGCTTTCCATGA...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCAAAAGATCAATCTGGTaGCATGGTCGGTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLKRSIW*HGRSGL
Trigger: CAACCCTGACCGACCATGTCACCAGATTGATCTTTT...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGTCCATCCTGCTTTCTTaGAAAGATCAATCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRSILLS*KDQSGD
Trigger: GTCACCAGATTGATCTTTTCAAGAAAGCAGGATGGA...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTGGAAAGCCATTTGGATaGCATCCAGAGTGGATGATC +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPGKPFG*HPEWMI
Trigger: GATCATCCACTCTGGATGTCATCCAAATGGCTTTCC...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGGGAAAGCCATTTGGATaGCATCCAGAGTGGATGATC +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRGKPFG*HPEWMI
Trigger: GATCATCCACTCTGGATGTCATCCAAATGGCTTTCC...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGAACACAGGCGTTTTCTaGTCTGCCCACTATCACTTC +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRNTGVF*SAHYHF
Trigger: GAAGTGATAGTGGGCAGAGCAGAAAACGCCTGTGTT...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCAACACAGGCGTTTTCTaGTCTGCCCACTATCACTTC +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLNTGVF*SAHYHF
Trigger: GAAGTGATAGTGGGCAGAGCAGAAAACGCCTGTGTT...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTAACACAGGCGTTTTCTaGTCTGCCCACTATCACTTC +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPNTGVF*SAHYHF
Trigger: GAAGTGATAGTGGGCAGAGCAGAAAACGCCTGTGTT...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGATGCACTCTGTAGTCTaGAGCAAGATGCCTACGCAT +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRMHSVV*SKMPTH
Trigger: ATGCGTAGGCATCTTGCTCCAGACTACAGAGTGCAT...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGTGGGATGATTGGTGTTaGAGGAGTAATGATAGTCCA +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRWDDWC*RSNDSP
Trigger: TGGACTATCATTACTCCTCCAACACCAATCATCCCA...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GAATCCAAGGGAAGAGCTTCAGGAAGCTCTTCAGGAAGGAAGCAATTATCATTGGCTGCCGGGAACAGGTaGTGGGGCCGGCGTAGCGCC +
Preference number: 4 (lower is better)
Translates to: ESKGRASGSSSGRKQLSLAAGNR*WGRRSA
Trigger: GGCGCTACGCCGGCCCCACCACCTGTTCCCGGCAGC...CAATGATAATTGCTTCCTTCCTGAAGAGCTTCCTGAAGCTCTTCCCTTGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTAACAGCAACAACGTCTaGGATGATTGGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPNSNNV*DDWCWR
Trigger: CCTCCAACACCAATCATCCCAGACGTTGTTGCTGTT...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675158.1
CDS-3UTR TCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGGTAGTCTTTGATAATTaGCCTGTACGCTCGGTACTC +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRVVFDN*PVRSVL
Trigger: GAGTACCGAGCGTACAGGTCAATTATCAAAGACTAC...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCGTCACAAATTTTCCCTaGGCAGCCAATTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLVTNFP*AANLCL
Trigger: CAGACACAAATTGGCTGCTCAGGGAAAATTTGTGAC...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAACCTGGCTTCTCTGTaGAAAAATATCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPNLASL*KNISSS
Trigger: GCTGGAAGAGATATTTTTGCACAGAGAAGCCAGGTT...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGAATGGTAGTGATACCTaGATTGAAAGAGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRNGSDT*IEREMR
Trigger: CCTCATCTCTCTTTCAATGCAGGTATCACTACCATT...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR GCA 90 bp GAATCCAAGGGAAGAGCTTCAGGAAGCTCTTCAGGAAGGAAGCAATTATCATTGCGCGGCCCCATTGGCTaGCGGGAACAGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ESKGRASGSSSGRKQLSLRGPIG*REQVVG
Trigger: CCCCACCACCTGTTCCCGGCAGCCAATGGGGCCGCG...CAATGATAATTGCTTCCTTCCTGAAGAGCTTCCTGAAGCTCTTCCCTTGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR GCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGAATGGTAGTGATACCTaGAAAGGGGTGGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRNGSDT*KGVVFC
Trigger: GCAGAAAACCACCCCTTTGCAGGTATCACTACCATT...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CCA 90 bp ACAAGCTATCTGCTCACCTGCAAAGGGGTGGTTTTCTGCACATGGGCACCAAAAAATGTTCCTGGCCTCTaGGCCGCGTCGGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: TSYLLTCKGVVFCTWAPKNVPGL*AASVQA
Trigger: GGCTTGGACCGACGCGGCCCAGAGGCCAGGAACATT...TTTTGGTGCCCATGTGCAGAAAACCACCCCTTTGCAGGTGAGCAGATAGCTTGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp AGTCCATCCTGCTTTCTTGAAAAGATCAATCTGGTGACATGGTCGGTCAGGGTTCGCGCGGAATGTTCCTaGCCTCTGGGCCGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: SPSCFLEKINLVTWSVRVRAECS*PLGRVG
Trigger: ACCGACGCGGCCCAGAGGCCAGGAACATTCCGCGCG...AACCCTGACCGACCATGTCACCAGATTGATCTTTTCAAGAAAGCAGGATGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCTGGGATGATTGGTGTTaGAGGAGTAATGATAGTCCA +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPWDDWC*RSNDSP
Trigger: TGGACTATCATTACTCCTCCAACACCAATCATCCCA...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCATCGTCTGGGATGATTaGTGTTGGAGGAGTAATGAT +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPIVWDD*CWRSND
Trigger: ATCATTACTCCTCCAACACCAATCATCCCAGACGAT...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674905.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCTCATGGAAAGCCATTTaGATGACATCCAGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPSWKAI*MTSRVD
Trigger: ATCCACTCTGGATGTCATCCAAATGGCTTTCCATGA...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAAGTTTGAAGTCCTGTaGCAATATCCCGTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPKFEVL*QYPVRS
Trigger: ACTCCTTACGGGATATTGCCACAGGACTTCAAACTT...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTAGTTTTATACTTCAATaGCCAGTCAATGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPSFILQ*PVNGVR
Trigger: CCTGACCCCATTGACTGGTCATTGAAGTATAAAACT...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCTCCATCCTGCTTTCTTaGAAAGATCAATCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLSILLS*KDQSGD
Trigger: GTCACCAGATTGATCTTTTCAAGAAAGCAGGATGGA...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCATCCTGCTTTCTTaGAAAGATCAATCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRSILLS*KDQSGD
Trigger: GTCACCAGATTGATCTTTTCAAGAAAGCAGGATGGA...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp CTGTACGCTCGGTACTCAAAGAAGCGTGAACGCCATGCCATGGGAGCCTCGATACTTCTTAGGTGTATCTaGGGCCAGCCACAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LYARYSKKRERHAMGASILLRCI*GQPQAP
Trigger: TGGAGCTTGTGGCTGGCCTCAGATACACCTAAGAAG...TATCGAGGCTCCCATGGCATGGCGTTCACGCTTCTTTGAGTACCGAGCGTACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCCCTGTTAAGGAGATaGTTGTTTAAAGCACTACAG +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLPLLRR*LFKALQ
Trigger: CTGTAGTGCTTTAAACAATCATCTCCTTAACAGGGG...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCCTGTTAAGGAGATaGTTGTTTAAAGCACTACAG +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPPLLRR*LFKALQ
Trigger: CTGTAGTGCTTTAAACAATCATCTCCTTAACAGGGG...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGAACCTGGCTTCTCTGTaGAAAAATATCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRNLASL*KNISSS
Trigger: GCTGGAAGAGATATTTTTGCACAGAGAAGCCAGGTT...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGAAGGTAGCATCAATATaGATGGGATTGGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRKVASI*MGLGSL
Trigger: TAAAGATCCCAATCCCATGCATATTGATGCTACCTT...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTTGGGATGATTGGTGTTaGAGGAGTAATGATAGTCCA +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPWDDWC*RSNDSP
Trigger: TGGACTATCATTACTCCTCCAACACCAATCATCCCA...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTATCGTCTGGGATGATTaGTGTTGGAGGAGTAATGAT +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPIVWDD*CWRSND
Trigger: ATCATTACTCCTCCAACACCAATCATCCCAGACGAT...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674905.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGAAAGAGACAATTACCTaGTTCTACTTAGGATCTGTG +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRKETIT*FYLGSV
Trigger: CACAGATCCTAAGTAGAACCAGGTAATTGTCTCTTT...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGAACGTCTGGGATGATTaGTGTTGGAGGAGTAATGAT +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRNVWDD*CWRSND
Trigger: ATCATTACTCCTCCAACACCAATCATCCCAGACGTT...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675158.1
CDS-3UTR TCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCGTCAACAGAGAACTCTaGAGTTTTGTTCTATTGACT +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPVNREL*SFVLLT
Trigger: AGTCAATAGAACAAAACTTCAGAGTTCTCTGTTGAC...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR GCA 90 bp CAGCTGCCAGGTGATTTGGTGAGAAGAGTGAGTAGGAGTGACCAGTTAGGAGTTGGAGGAAGCCGTAGCTaGCTGGGTGCTCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: QLPGDLVRRVSRSDQLGVGGSRS*LGALES
Trigger: ACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCC...AACTCCTAACTGGTCACTCCTACTCACTCTTCTCACCAAATCACCTGGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGAAACATCTTTTGAATTaGAACTTCATTGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRKHLLN*NFIGIH
Trigger: GTGGATGCCAATGAAGTTCCAATTCAAAAGATGTTT...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
3UTR CAA 72 bp CGTGAACGCCATGCCATGGGAGCCTCGATAATCTCATaGCCCACAACTATCAGGATGTCTCGAGGCATTGCA +
Preference number: 4 (lower is better)
Translates to: RERHAMGASIIS*PTTIRMSRGIA
Trigger: TGCAATGCCTCGAGACATCCTGATAGTTGTGGGCAATGAGATTATCGAGGCTCCCATGGCATGGCGTTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp AGTCCATCCTGCTTTCTTGAAAAGATCAATCTGGTGACATGGTCGGTCAGGGTTGGTAGCAGCAGCAGGTaGGGAGGGAGCGCACTTTCA +
Preference number: 4 (lower is better)
Translates to: SPSCFLEKINLVTWSVRVGSSSR*GGSALS
Trigger: TGAAAGTGCGCTCCCTCCTCACCTGCTGCTGCTACC...AACCCTGACCGACCATGTCACCAGATTGATCTTTTCAAGAAAGCAGGATGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR GCA 90 bp ATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCGGCTTTGTCGTCAGCTaGACAGGAGTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: MPSLLLVKWPVLFICVGPGFVVS*TGVPGG
Trigger: TCCTCCCGGAACTCCTGTGCAGCTGACGACAAAGCC...GGGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR GCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGAAGGTAGCATCAATATaGATGGGATTGGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRKVASI*MGLGSL
Trigger: TAAAGATCCCAATCCCATGCATATTGATGCTACCTT...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR GCA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCGAAATAATAACTTGGTaGCTCCAGCTTTTCAAACAT +
Preference number: 4 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPEIITW*LQLFKH
Trigger: ATGTTTGAAAAGCTGGAGGCACCAAGTTATTATTTC...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACCGCGCGGAATGTTCCTaGCCTCTGGGCCGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNRAECS*PLGRVG
Trigger: ACCGACGCGGCCCAGAGGCCAGGAACATTCCGCGCG...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp GGTGGTTTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATCGCGCGGAATGTTCCTaGCCTCTGGGCCGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: GGFLHMGTKTLAKSYKIYRAECS*PLGRVG
Trigger: ACCGACGCGGCCCAGAGGCCAGGAACATTCCGCGCG...ATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAAACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCTCGCCCTGGCCCGGCTaGTCCACGCGCGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISSPWPG*STRGMF
Trigger: GAACATTCCGCGCGTGGACCAGCCGGGCCAGGGCGA...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCTTCTACAGAGTGGATaGGATAATCCTGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPLLQSG*DNPGYK
Trigger: TTTATAACCAGGATTATCCCATCCACTCTGTAGAAG...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCAAAGAGACAATTACCTaGTTCTACTTAGGATCTGTG +
Preference number: 4 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLKETIT*FYLGSV
Trigger: CACAGATCCTAAGTAGAACCAGGTAATTGTCTCTTT...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTTGGGCACCAAAACGTTaGCTAAGTCATATAAGATTT +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPWAPKR*LSHIRF
Trigger: AAATCTTATATGACTTAGCCAACGTTTTGGTGCCCA...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTACTTAAGTAAAACCTaGTCCTGCTCTTCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRYLSKT*SCSSVQ
Trigger: TTGAACTGAAGAGCAGGACCAGGTTTTACTTAAGTA...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp AATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGAAGCGCCGCGGCCGCTaGCTCGAGCCTCCGATGCTT +
Preference number: 4 (lower is better)
Translates to: NNALLASGKMASTFHMCWKRRGR*LEPPML
Trigger: AAGCATCGGAGGCTCGAGCCAGCGGCCGCGGCGCTT...CCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp AATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCCTTCACCTCGATGGTaGACGGTGGAACACAGGCGT +
Preference number: 4 (lower is better)
Translates to: NALLASGKMASTFHMCWPPSPRW*TVEHRR
Trigger: ACGCCTGTGTTCCACCGTTCACCATCGAGGTGAAGG...GGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp ATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCACTTCACCTCGATGGTaGACGGTGGAACACAGGCGT +
Preference number: 4 (lower is better)
Translates to: MPSLLLVKWPVLFICVGPTSPRW*TVEHRR
Trigger: ACGCCTGTGTTCCACCGTTCACCATCGAGGTGAAGT...GGGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558118.1
CDS-3UTR GCA 90 bp ACAAGCTATCTGCTCACCTGCAAAGGGGTGGTTTTCTGCACATGGGCACCAAAACTCAGGAGCTCAGGATaGATCTCCAACTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TSYLLTCKGVVFCTWAPKLRSSG*ISNLLG
Trigger: CCCCAACAAGTTGGAGATGCATCCTGAGCTCCTGAG...TTTTGGTGCCCATGTGCAGAAAACCACCCCTTTGCAGGTGAGCAGATAGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp AATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCGAAGCCGTAGCTGCCTaGGTGCTCTGGAAAGTTCGC +
Preference number: 4 (lower is better)
Translates to: NALLASGKMASTFHMCWPEAVAA*VLWKVR
Trigger: GCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTC...GGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCTGGGCAGAGGCTCAGTaGCTTTGTCGTCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: NALLASGKMASTFHMCWPWAEAQ*LCRQLH
Trigger: GTGCAGCTGACGACAAAGCCACTGAGCCTCTGCCCA...GGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR CCA 90 bp CGTAAGGAGTTTAACTCGTTGATCTGGAAGGAGTTCAATACAGAGATCCGGACCAGACAGGGCAGTCCTTaGGCAGAGGCTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RKEFNSLIWKEFNTEIRTRQGSP*AEAQWL
Trigger: AAGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCT...GGTCCGGATCTCTGTATTGAACTCCTTCCAGATCAACGAGTTAAACTCCTTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGAAACATCTTTTGAATTaGAACTTCATTGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRKHLLN*NFIGIH
Trigger: GTGGATGCCAATGAAGTTCCAATTCAAAAGATGTTT...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTGGCCTATTTAACCAATaGTATTTAGGAAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPGLFNQ*YLGRIC
Trigger: ACAGATTCTTCCTAAATACCATTGGTTAAATAGGCC...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp CTGTACGCTCGGTACTCAAAGAAGCGTGAACGCCATGCCATGGGAGCCTCGATATGGAATGGGGAATCCTaGAAATGCAGACAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LYARYSKKRERHAMGASIWNGES*KCRQES
Trigger: TGACTCTTGTCTGCATTTCCAGGATTCCCCATTCCA...TATCGAGGCTCCCATGGCATGGCGTTCACGCTTCTTTGAGTACCGAGCGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp ACGCCATGCCATGGGAGCCTCGATAATCTCATTGCCCACAACTATCAGGATGTCAAAAGATCAATCTGGTaGCATGGTCGGTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: TPCHGSLDNLIAHNYQDVKRSIW*HGRSGL
Trigger: CAACCCTGACCGACCATGTCACCAGATTGATCTTTT...GACATCCTGATAGTTGTGGGCAATGAGATTATCGAGGCTCCCATGGCATGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp CAGCTGCCAGGTGATTTGGTGAGAAGAGTGAGTAGGAGTGACCAGTTAGGAGTTATTGCAGCTGCCAGGTaGTTTGGTGAGAAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: QLPGDLVRRVSRSDQLGVIAAAR*FGEKSE
Trigger: CTCACTCTTCTCACCAAATCACCTGGCAGCTGCAAT...AACTCCTAACTGGTCACTCCTACTCACTCTTCTCACCAAATCACCTGGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAATGTTCCTGGCCTCTaGGCCGCGTCGGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISNVPGL*AASVQA
Trigger: GGCTTGGACCGACGCGGCCCAGAGGCCAGGAACATT...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp AATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGAATGTTCCTGGCCTCTaGGCCGCGTCGGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: NNALLASGKMASTFHMCWNVPGL*AASVQA
Trigger: GGCTTGGACCGACGCGGCCCAGAGGCCAGGAACATT...CCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp ATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCCTCGATGGTGAACGGTaGAACACAGGCGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: MPSLLLVKWPVLFICVGPLDGER*NTGVFC
Trigger: GCAGAAAACGCCTGTGTTCCACCGTTCACCATCGAG...GGGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR TCA 90 bp GAATCCAAGGGAAGAGCTTCAGGAAGCTCTTCAGGAAGGAAGCAATTATCATTGGTACTCAAAGAAGCGTaGACGCCATGCCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: ESKGRASGSSSGRKQLSLVLKEA*TPCHGS
Trigger: GCTCCCATGGCATGGCGTTCACGCTTCTTTGAGTAC...CAATGATAATTGCTTCCTTCCTGAAGAGCTTCCTGAAGCTCTTCCCTTGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp AGGTGGCATGAGCCATTCAGAAAGACTTTCCTAGTCGCGCATGGTAGCTCACACGTAGTCTTTGATAATTaGCCTGTACGCTCGGTACTC +
Preference number: 4 (lower is better)
Translates to: RWHEPFRKTFLVAHGSSHVVFDN*PVRSVL
Trigger: GAGTACCGAGCGTACAGGTCAATTATCAAAGACTAC...GTGTGAGCTACCATGCGCGACTAGGAAAGTCTTTCTGAATGGCTCATGCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR TCA 90 bp CTGTACGCTCGGTACTCAAAGAAGCGTGAACGCCATGCCATGGGAGCCTCGATACCTTGTTACATCACGTaGCATAAGGAGAAATCAAAG +
Preference number: 4 (lower is better)
Translates to: LYARYSKKRERHAMGASIPCYIT*HKEKSK
Trigger: CTTTGATTTCTCCTTATGTCACGTGATGTAACAAGG...TATCGAGGCTCCCATGGCATGGCGTTCACGCTTCTTTGAGTACCGAGCGTACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR GCA 90 bp AATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGAGTAGGACTGTAAGGTaGCTCGGCGCCGGACATCGC +
Preference number: 4 (lower is better)
Translates to: NNALLASGKMASTFHMCWSRTVR*LGAGHR
Trigger: GCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACT...CCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCGCGCGGAATGTTCCTaGCCTCTGGGCCGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFRAECS*PLGRVG
Trigger: ACCGACGCGGCCCAGAGGCCAGGAACATTCCGCGCG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTTCGCCCTGGCCCGGCTaGTCCACGCGCGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFSPWPG*STRGMF
Trigger: GAACATTCCGCGCGTGGACCAGCCGGGCCAGGGCGA...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCCCTTCACCTCGATGGTaGACGGTGGAACACAGGCGT +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISPSPRW*TVEHRR
Trigger: ACGCCTGTGTTCCACCGTTCACCATCGAGGTGAAGG...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR TCA 90 bp GGTGGTTTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATCCTTCACCTCGATGGTaGACGGTGGAACACAGGCGT +
Preference number: 4 (lower is better)
Translates to: GGFLHMGTKTLAKSYKIYPSPRW*TVEHRR
Trigger: ACGCCTGTGTTCCACCGTTCACCATCGAGGTGAAGG...ATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAAACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR GCA 90 bp AATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: NALLASGKMASTFHMCWPLWKVR*THPVKV
Trigger: AACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAG...GGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR GCA 90 bp AATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGGGAGGAAGCCGTAGCTaGCTGGGTGCTCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: NNALLASGKMASTFHMCWGGSRS*LGALES
Trigger: ACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCC...CCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR GCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCGGAGGAAGCCGTAGCTaGCTGGGTGCTCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISGGSRS*LGALES
Trigger: ACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCC...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR GCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACGGCTTTGTCGTCAGCTaGACAGGAGTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNGFVVS*TGVPGG
Trigger: TCCTCCCGGAACTCCTGTGCAGCTGACGACAAAGCC...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR GCA 90 bp GGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCGGCTTTGTCGTCAGCTaGACAGGAGTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GITNVNFNGSDTCKGVVFGFVVS*TGVPGG
Trigger: TCCTCCCGGAACTCCTGTGCAGCTGACGACAAAGCC...GAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR GCA 90 bp ATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCAACACAGGCGTTTTCTaGTCTGCCCACTATCACTTC +
Preference number: 4 (lower is better)
Translates to: MPSLLLVKWPVLFICVGPNTGVF*SAHYHF
Trigger: GAAGTGATAGTGGGCAGAGCAGAAAACGCCTGTGTT...GGGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR GCA 90 bp ATTGGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTAGTAGGACTGTAAGGTaGCTCGGCGCCGGACATCGC +
Preference number: 4 (lower is better)
Translates to: IGITNVNFNGSDTCKGVVSRTVR*LGAGHR
Trigger: GCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACT...AACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR GCA 90 bp AATGACCAGTCAATGGGGTCAGGCCTCCTTACTGTCACTCCTTCCGTTTTTAAAATATGTGTTGGCCCCTaGAATCCCAGCACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: NDQSMGSGLLTVTPSVFKICVGP*NPSTLG
Trigger: TCCCAAAGTGCTGGGATTGCAGGGGCCAACACATAT...TTTAAAAACGGAAGGAGTGACAGTAAGGAGGCCTGACCCCATTGACTGGTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp AATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGGCTGCCTGGGTGCTCTaGAAAGTTCGCTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: NNALLASGKMASTFHMCWAAWVL*KVRCTH
Trigger: ATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGC...CCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR CCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACGCTGCCTGGGTGCTCTaGAAAGTTCGCTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNAAWVL*KVRCTH
Trigger: ATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGC...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACGAAGCCGTAGCTGCCTaGGTGCTCTGGAAAGTTCGC +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNEAVAA*VLWKVR
Trigger: GCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTC...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCGAAGCCGTAGCTGCCTaGGTGCTCTGGAAAGTTCGC +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISEAVAA*VLWKVR
Trigger: GCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTC...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCTGGGCAGAGGCTCAGTaGCTTTGTCGTCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISWAEAQ*LCRQLH
Trigger: GTGCAGCTGACGACAAAGCCACTGAGCCTCTGCCCA...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp GGTGGTTTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATTGGGCAGAGGCTCAGTaGCTTTGTCGTCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GGFLHMGTKTLAKSYKIYWAEAQ*LCRQLH
Trigger: GTGCAGCTGACGACAAAGCCACTGAGCCTCTGCCCA...ATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAAACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp AATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGAGACAGGGCAGTCCTTaGGCAGAGGCTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: NNALLASGKMASTFHMCWRQGSP*AEAQWL
Trigger: AAGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCT...CCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAGACAGGGCAGTCCTTaGGCAGAGGCTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISRQGSP*AEAQWL
Trigger: AAGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCT...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp GGTGGTTTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATTCGCAGGTCCAGCAATaGAAGCCTCCTCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GGFLHMGTKTLAKSYKIYSQVQQ*KPPPRE
Trigger: TTCCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGA...ATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAAACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp GATCTTTGGGAAAATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTGGAGGCCAAGGCGTGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: DLWENNALLASGKMASTFGGQGV*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACACGCCTTGGCCTCC...AAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTTCCCAAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR CCA 90 bp ATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCACTTTTCATATGTGTTaGCCCCTGCAATCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: MPSLLLVKWPVLFICVGPTFHMC*PLQSQH
Trigger: GTGCTGGGATTGCAGGGGCCAACACATATGAAAAGT...GGGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCGTACTCAAAGAAGCGTaGACGCCATGCCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISVLKEA*TPCHGS
Trigger: GCTCCCATGGCATGGCGTTCACGCTTCTTTGAGTAC...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR TCA 90 bp ATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCGTAGTCTTTGATAATTaGCCTGTACGCTCGGTACTC +
Preference number: 4 (lower is better)
Translates to: MPSLLLVKWPVLFICVGPVVFDN*PVRSVL
Trigger: GAGTACCGAGCGTACAGGTCAATTATCAAAGACTAC...GGGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp GGTGGTTTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATGGTGGATGGATCACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: GGFLHMGTKTLAKSYKIYGGWIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGATCCATCCACC...ATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAAACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAATGTTCCTGGCCTCTaGGCCGCGTCGGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFNVPGL*AASVQA
Trigger: GGCTTGGACCGACGCGGCCCAGAGGCCAGGAACATT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp CATCCGTACCCTTTTGAGTCCTTTGAAATATGTGATGACAGGACACTTTTAAAGGCTGCCTGGGTGCTCTaGAAAGTTCGCTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: HPYPFESFEICDDRTLLKAAWVL*KVRCTH
Trigger: ATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGC...CTTTAAAAGTGTCCTGTCATCACATATTTCAAAGGACTCAAAAGGGTACGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCGAGCTGTTGTCCACTTaGCGCCACGGTGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISELLST*RHGGSS
Trigger: ACTACTTCCACCGTGGCGCCAAGTGGACAACAGCTC...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp ATTGGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTCGCAGGTCCAGCAATaGAAGCCTCCTCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: IGITNVNFNGSDTCKGVVSQVQQ*KPPPRE
Trigger: TTCCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGA...AACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CCA 90 bp CTTCACCAGGCCACCATAAGGAAACAATGGAACAGAGCTGGTGTTTTAATATCTTCACCTGCAAAGGGGTaGTTTTCTGCACATGGGCAC +
Preference number: 4 (lower is better)
Translates to: LHQATIRKQWNRAGVLISSPAKG*FSAHGH
Trigger: GTGCCCATGTGCAGAAAACCACCCCTTTGCAGGTGA...AGATATTAAAACACCAGCTCTGTTCCATTGTTTCCTTATGGTGGCCTGGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR TCA 90 bp ATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCAGTTTTATACTTCAATaGCCAGTCAATGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: MPSLLLVKWPVLFICVGPSFILQ*PVNGVR
Trigger: CCTGACCCCATTGACTGGTCATTGAAGTATAAAACT...GGGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR GCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAGTAGGACTGTAAGGTaGCTCGGCGCCGGACATCGC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFSRTVR*LGAGHR
Trigger: GCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR GCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACCTCAGGAGCTCAGGATaGATCTCCAACTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNLRSSG*ISNLLG
Trigger: CCCCAACAAGTTGGAGATGCATCCTGAGCTCCTGAG...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR GCA 90 bp GGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCCTCAGGAGCTCAGGATaGATCTCCAACTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GITNVNFNGSDTCKGVVFLRSSG*ISNLLG
Trigger: CCCCAACAAGTTGGAGATGCATCCTGAGCTCCTGAG...GAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR GCA 90 bp GGTGGTTTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATGCTGAACAAGCTATCTaGTCACCTGCAAAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGFLHMGTKTLAKSYKIYAEQAI*SPAKGW
Trigger: CCACCCCTTTGCAGGTGAGCAGATAGCTTGTTCAGC...ATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAAACCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR GCA 90 bp AATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCAGTTAGGAGTTAACTaGAATAGTCCAGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: NALLASGKMASTFHMCWPQLGVN*NSPGSR
Trigger: TCTGCTGCCTGGACTATTGCAGTTAACTCCTAACTG...GGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACCTCGATGGTGAACGGTaGAACACAGGCGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNLDGER*NTGVFC
Trigger: GCAGAAAACGCCTGTGTTCCACCGTTCACCATCGAG...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp GATCTTTGGGAAAATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCTCGATGGTGAACGGTaGAACACAGGCGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: DLWENNALLASGKMASTFLDGER*NTGVFC
Trigger: GCAGAAAACGCCTGTGTTCCACCGTTCACCATCGAG...AAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTTCCCAAAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR CCA 90 bp CTTCACCAGGCCACCATAAGGAAACAATGGAACAGAGCTGGTGTTTTAATATCTATGGTCGGTCAGGGTTaGAAAGCACAATACCAGGTC +
Preference number: 4 (lower is better)
Translates to: LHQATIRKQWNRAGVLISMVGQG*KAQYQV
Trigger: GACCTGGTATTGTGCTTTCCAACCCTGACCGACCAT...AGATATTAAAACACCAGCTCTGTTCCATTGTTTCCTTATGGTGGCCTGGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
3UTR CAA 72 bp AAGAGAAGGGGGCTGAAAGTAATATTCTGTTCAACCTaGCCATTACAGGCTGTGACGGAAGAAGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: KRRGLKVIFCST*PLQAVTEEDLR
Trigger: CCTCAGATCTTCTTCCGTCACAGCCTGTAATGGCAAGGTTGAACAGAATATTACTTTCAGCCCCCTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCCTTCACCTCGATGGTaGACGGTGGAACACAGGCGT +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFPSPRW*TVEHRR
Trigger: ACGCCTGTGTTCCACCGTTCACCATCGAGGTGAAGG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCCTCTTCCAGCTCGAATaGAGTCAGCAGCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISLFQLE*SQQHQS
Trigger: GCTTTGATGCTGCTGACTTCATTCGAGCTGGAAGAG...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR TCA 90 bp AATGACCAGTCAATGGGGTCAGGCCTCCTTACTGTCACTCCTTCCGTTTTTAAACCCCTGTTAAGGAGATaGTTGTTTAAAGCACTACAG +
Preference number: 4 (lower is better)
Translates to: NDQSMGSGLLTVTPSVFKPLLRR*LFKALQ
Trigger: CTGTAGTGCTTTAAACAATCATCTCCTTAACAGGGG...TTTAAAAACGGAAGGAGTGACAGTAAGGAGGCCTGACCCCATTGACTGGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp AGTCCATCCTGCTTTCTTGAAAAGATCAATCTGGTGACATGGTCGGTCAGGGTTTGCTGTACTAACAGATaGGTCAATAACTGGAATGGG +
Preference number: 4 (lower is better)
Translates to: SPSCFLEKINLVTWSVRVCCTNR*VNNWNG
Trigger: CCCATTCCAGTTATTGACTCATCTGTTAGTACAGCA...AACCCTGACCGACCATGTCACCAGATTGATCTTTTCAAGAAAGCAGGATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR GCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNLWKVR*THPVKV
Trigger: AACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAG...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR GCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGGAGGAAGCCGTAGCTaGCTGGGTGCTCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFGGSRS*LGALES
Trigger: ACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR GCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGGCTTTGTCGTCAGCTaGACAGGAGTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFGFVVS*TGVPGG
Trigger: TCCTCCCGGAACTCCTGTGCAGCTGACGACAAAGCC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR GCA 90 bp TTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATAAACTTGGCTTTGTCGTCAGCTaGACAGGAGTTCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FLHMGTKTLAKSYKIYKLGFVVS*TGVPGG
Trigger: TCCTCCCGGAACTCCTGTGCAGCTGACGACAAAGCC...AAGTTTATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR GCA 90 bp GATCTTTGGGAAAATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTATATGTGTTGGCCCCTaGAATCCCAGCACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: DLWENNALLASGKMASTFICVGP*NPSTLG
Trigger: TCCCAAAGTGCTGGGATTGCAGGGGCCAACACATAT...AAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTTCCCAAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR GCA 90 bp CGTAAGGAGTTTAACTCGTTGATCTGGAAGGAGTTCAATACAGAGATCCGGACCAAAAATCACTTGGATTaGAGCTGCCAGGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: RKEFNSLIWKEFNTEIRTKNHLD*SCQVIW
Trigger: CCAAATCACCTGGCAGCTGCAATCCAAGTGATTTTT...GGTCCGGATCTCTGTATTGAACTCCTTCCAGATCAACGAGTTAAACTCCTTACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGCTGCCTGGGTGCTCTaGAAAGTTCGCTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFAAWVL*KVRCTH
Trigger: ATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGAAGCCGTAGCTGCCTaGGTGCTCTGGAAAGTTCGC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFEAVAA*VLWKVR
Trigger: GCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTTGGGCAGAGGCTCAGTaGCTTTGTCGTCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFWAEAQ*LCRQLH
Trigger: GTGCAGCTGACGACAAAGCCACTGAGCCTCTGCCCA...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAGACAGGGCAGTCCTTaGGCAGAGGCTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFRQGSP*AEAQWL
Trigger: AAGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp TTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATAAACTTAGACAGGGCAGTCCTTaGGCAGAGGCTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: FLHMGTKTLAKSYKIYKLRQGSP*AEAQWL
Trigger: AAGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCT...AAGTTTATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACTCAATGACCAGTCAATaGGGTCAGGCCTCCTTACTG +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNSMTSQ*GQASLL
Trigger: CAGTAAGGAGGCCTGACCCCATTGACTGGTCATTGA...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp AGGAGTCCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTTCAATGACCAGTCAATaGGGTCAGGCCTCCTTACTG +
Preference number: 4 (lower is better)
Translates to: RSPVVLILKDTQPRIVFSSMTSQ*GQASLL
Trigger: CAGTAAGGAGGCCTGACCCCATTGACTGGTCATTGA...AGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGGACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp CAGCTGCCAGGTGATTTGGTGAGAAGAGTGAGTAGGAGTGACCAGTTAGGAGTTCTTCTACAGAGTGGATaGGATAATCCTGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: QLPGDLVRRVSRSDQLGVLLQSG*DNPGYK
Trigger: TTTATAACCAGGATTATCCCATCCACTCTGTAGAAG...AACTCCTAACTGGTCACTCCTACTCACTCTTCTCACCAAATCACCTGGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp GAATCCAAGGGAAGAGCTTCAGGAAGCTCTTCAGGAAGGAAGCAATTATCATTGAGCAGCATCAAAGCATaGCTCAAACTCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: ESKGRASGSSSGRKQLSLSSIKA*LKLSCH
Trigger: GTGACAACTGAGTTTGAGCCATGCTTTGATGCTGCT...CAATGATAATTGCTTCCTTCCTGAAGAGCTTCCTGAAGCTCTTCCCTTGGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACATGGTCGGTCAGGGTTaGAAAGCACAATACCAGGTC +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNMVGQG*KAQYQV
Trigger: GACCTGGTATTGTGCTTTCCAACCCTGACCGACCAT...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCGAGTGGATGATCGTCTaGGATGATTGGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISEWMIV*DDWCWR
Trigger: CCTCCAACACCAATCATCCCAGACGATCATCCACTC...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp AATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGGAGTGGATGATCGTCTaGGATGATTGGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: NNALLASGKMASTFHMCWEWMIV*DDWCWR
Trigger: CCTCCAACACCAATCATCCCAGACGATCATCCACTC...CCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp AGGTGGCATGAGCCATTCAGAAAGACTTTCCTAGTCGCGCATGGTAGCTCACACAAACATCTTTTGAATTaGAACTTCATTGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: RWHEPFRKTFLVAHGSSHKHLLN*NFIGIH
Trigger: GTGGATGCCAATGAAGTTCCAATTCAAAAGATGTTT...GTGTGAGCTACCATGCGCGACTAGGAAAGTCTTTCTGAATGGCTCATGCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTTCGCAGGTCCAGCAATaGAAGCCTCCTCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFSQVQQ*KPPPRE
Trigger: TTCCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGA...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCATACCTGCAAAGGGGTaGTTTTCTGCACATGGGCAC +
Preference number: 4 (lower is better)
Translates to: GITNVNFNGSDTCKGVVFIPAKG*FSAHGH
Trigger: GTGCCCATGTGCAGAAAACCACCCCTTTGCAGGTAT...GAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674905.1
3UTR CAA 72 bp TCAGGGTTGGAAAGCACAATACCAGGTCCAATGATGTaGAAGGTAGCATCAATATGCATGGGATTGGGATCT +
Preference number: 4 (lower is better)
Translates to: SGLESTIPGPMM*KVASICMGLGS
Trigger: AGATCCCAATCCCATGCATATTGATGCTACCTTCAACATCATTGGACCTGGTATTGTGCTTTCCAACCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGTACTCAAAGAAGCGTaGACGCCATGCCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFVLKEA*TPCHGS
Trigger: GCTCCCATGGCATGGCGTTCACGCTTCTTTGAGTAC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAAAAGATCAATCTGGTaGCATGGTCGGTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISKRSIW*HGRSGL
Trigger: CAACCCTGACCGACCATGTCACCAGATTGATCTTTT...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR TCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACGGAAAGCCATTTGGATaGCATCCAGAGTGGATGATC +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNGKPFG*HPEWMI
Trigger: GATCATCCACTCTGGATGTCATCCAAATGGCTTTCC...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR GCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACAACACAGGCGTTTTCTaGTCTGCCCACTATCACTTC +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNNTGVF*SAHYHF
Trigger: GAAGTGATAGTGGGCAGAGCAGAAAACGCCTGTGTT...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp ATTGGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTCAATGACCAGTCAATaGGGTCAGGCCTCCTTACTG +
Preference number: 4 (lower is better)
Translates to: IGITNVNFNGSDTCKGVVSMTSQ*GQASLL
Trigger: CAGTAAGGAGGCCTGACCCCATTGACTGGTCATTGA...AACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGAGCTGTTGTCCACTTaGCGCCACGGTGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFELLST*RHGGSS
Trigger: ACTACTTCCACCGTGGCGCCAAGTGGACAACAGCTC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp TTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATAAACTTGAGCTGTTGTCCACTTaGCGCCACGGTGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: FLHMGTKTLAKSYKIYKLELLST*RHGGSS
Trigger: ACTACTTCCACCGTGGCGCCAAGTGGACAACAGCTC...AAGTTTATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp CTTCACCAGGCCACCATAAGGAAACAATGGAACAGAGCTGGTGTTTTAATATCTAGCAGCATCAAAGCATaGCTCAAACTCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LHQATIRKQWNRAGVLISSSIKA*LKLSCH
Trigger: GTGACAACTGAGTTTGAGCCATGCTTTGATGCTGCT...AGATATTAAAACACCAGCTCTGTTCCATTGTTTCCTTATGGTGGCCTGGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCATGCACTCTGTAGTCTaGAGCAAGATGCCTACGCAT +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISMHSVV*SKMPTH
Trigger: ATGCGTAGGCATCTTGCTCCAGACTACAGAGTGCAT...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCATCAATCTGGTGACATaGTCGGTCAGGGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISINLVT*SVRVGK
Trigger: CTTTCCAACCCTGACCGACCATGTCACCAGATTGAT...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp ATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCTGCGAGTGGATGATCGTCTaGGATGATTGGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ITNVNFNGSDTCKGVVFCEWMIV*DDWCWR
Trigger: CCTCCAACACCAATCATCCCAGACGATCATCCACTC...GCAGAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CCA 90 bp AGGAGTCCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTTATGGGAGGCATAGGTaGATGGATCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: RSPVVLILKDTQPRIVFSYGRHR*MDHLRS
Trigger: TGACCTCAAGTGATCCATCCACCTATGCCTCCCATA...AGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGGACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR TCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCGTAGTCTTTGATAATTaGCCTGTACGCTCGGTACTC +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISVVFDN*PVRSVL
Trigger: GAGTACCGAGCGTACAGGTCAATTATCAAAGACTAC...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR TCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACGTCACAAATTTTCCCTaGGCAGCCAATTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNVTNFP*AANLCL
Trigger: CAGACACAAATTGGCTGCTCAGGGAAAATTTGTGAC...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR TCA 90 bp CTTCACCAGGCCACCATAAGGAAACAATGGAACAGAGCTGGTGTTTTAATATCTTCCATCCTGCTTTCTTaGAAAGATCAATCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LHQATIRKQWNRAGVLISSILLS*KDQSGD
Trigger: GTCACCAGATTGATCTTTTCAAGAAAGCAGGATGGA...AGATATTAAAACACCAGCTCTGTTCCATTGTTTCCTTATGGTGGCCTGGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR TCA 90 bp ATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCTGCGGAAAGCCATTTGGATaGCATCCAGAGTGGATGATC +
Preference number: 4 (lower is better)
Translates to: ITNVNFNGSDTCKGVVFCGKPFG*HPEWMI
Trigger: GATCATCCACTCTGGATGTCATCCAAATGGCTTTCC...GCAGAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR GCA 90 bp ATTGGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTAACACAGGCGTTTTCTaGTCTGCCCACTATCACTTC +
Preference number: 4 (lower is better)
Translates to: IGITNVNFNGSDTCKGVVNTGVF*SAHYHF
Trigger: GAAGTGATAGTGGGCAGAGCAGAAAACGCCTGTGTT...AACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCTCGATGGTGAACGGTaGAACACAGGCGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFLDGER*NTGVFC
Trigger: GCAGAAAACGCCTGTGTTCCACCGTTCACCATCGAG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAGCAGCATCAAAGCATaGCTCAAACTCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISSSIKA*LKLSCH
Trigger: GTGACAACTGAGTTTGAGCCATGCTTTGATGCTGCT...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp GGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCAGCAGCATCAAAGCATaGCTCAAACTCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GITNVNFNGSDTCKGVVFSSIKA*LKLSCH
Trigger: GTGACAACTGAGTTTGAGCCATGCTTTGATGCTGCT...GAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CCA 90 bp ATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCTGCATCAATCTGGTGACATaGTCGGTCAGGGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ITNVNFNGSDTCKGVVFCINLVT*SVRVGK
Trigger: CTTTCCAACCCTGACCGACCATGTCACCAGATTGAT...GCAGAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CCA 90 bp CATCCGTACCCTTTTGAGTCCTTTGAAATATGTGATGACAGGACACTTTTAAAGGTGGTTTTCTGCACATaGGCACCAAAACGTTGGCTA +
Preference number: 4 (lower is better)
Translates to: HPYPFESFEICDDRTLLKVVFCT*APKRWL
Trigger: TAGCCAACGTTTTGGTGCCCATGTGCAGAAAACCAC...CTTTAAAAGTGTCCTGTCATCACATATTTCAAAGGACTCAAAAGGGTACGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp TTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATAAACTTCCAGGGAGAGGAAGGTaGCATGAGCCATTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: FLHMGTKTLAKSYKIYKLPGRGR*HEPFRK
Trigger: CTTTCTGAATGGCTCATGCCACCTTCCTCTCCCTGG...AAGTTTATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR TCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACAGTTTTATACTTCAATaGCCAGTCAATGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNSFILQ*PVNGVR
Trigger: CCTGACCCCATTGACTGGTCATTGAAGTATAAAACT...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR TCA 90 bp AGGAGTCCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTAGTTTTATACTTCAATaGCCAGTCAATGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RSPVVLILKDTQPRIVFSSFILQ*PVNGVR
Trigger: CCTGACCCCATTGACTGGTCATTGAAGTATAAAACT...AGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGGACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR TCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCTCTTCCAGCTCGAATaGAGTCAGCAGCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFLFQLE*SQQHQS
Trigger: GCTTTGATGCTGCTGACTTCATTCGAGCTGGAAGAG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR TCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACTCCATCCTGCTTTCTTaGAAAGATCAATCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNSILLS*KDQSGD
Trigger: GTCACCAGATTGATCTTTTCAAGAAAGCAGGATGGA...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR TCA 90 bp AGGAGTCCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTCCCCTGTTAAGGAGATaGTTGTTTAAAGCACTACAG +
Preference number: 4 (lower is better)
Translates to: RSPVVLILKDTQPRIVFSPLLRR*LFKALQ
Trigger: CTGTAGTGCTTTAAACAATCATCTCCTTAACAGGGG...AGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGGACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR TCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCGCATTGAAAGAGAGATaGGGTCAGTTAGATGGACTA +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISALKER*GQLDGL
Trigger: TAGTCCATCTAACTGACCTCATCTCTCTTTCAATGC...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR GCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFLWKVR*THPVKV
Trigger: AACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR GCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACAACCTGGCTTCTCTGTaGAAAAATATCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNNLASL*KNISSS
Trigger: GCTGGAAGAGATATTTTTGCACAGAGAAGCCAGGTT...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR GCA 90 bp GGTGGTTTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATAACCTGGCTTCTCTGTaGAAAAATATCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGFLHMGTKTLAKSYKIYNLASL*KNISSS
Trigger: GCTGGAAGAGATATTTTTGCACAGAGAAGCCAGGTT...ATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAAACCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR GCA 90 bp CTTCACCAGGCCACCATAAGGAAACAATGGAACAGAGCTGGTGTTTTAATATCTGACAAGGCTATGATGTaGATGGCCTATTTAACCAAT +
Preference number: 4 (lower is better)
Translates to: LHQATIRKQWNRAGVLISDKAMM*MAYLTN
Trigger: ATTGGTTAAATAGGCCATGCACATCATAGCCTTGTC...AGATATTAAAACACCAGCTCTGTTCCATTGTTTCCTTATGGTGGCCTGGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTTCAATGACCAGTCAATaGGGTCAGGCCTCCTTACTG +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFSMTSQ*GQASLL
Trigger: CAGTAAGGAGGCCTGACCCCATTGACTGGTCATTGA...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTATGGTCGGTCAGGGTTaGAAAGCACAATACCAGGTC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFMVGQG*KAQYQV
Trigger: GACCTGGTATTGTGCTTTCCAACCCTGACCGACCAT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCTGGGATGATTGGTGTTaGAGGAGTAATGATAGTCCA +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISWDDWC*RSNDSP
Trigger: TGGACTATCATTACTCCTCCAACACCAATCATCCCA...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCATCGTCTGGGATGATTaGTGTTGGAGGAGTAATGAT +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISIVWDD*CWRSND
Trigger: ATCATTACTCCTCCAACACCAATCATCCCAGACGAT...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp GGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCATCGTCTGGGATGATTaGTGTTGGAGGAGTAATGAT +
Preference number: 4 (lower is better)
Translates to: GITNVNFNGSDTCKGVVFIVWDD*CWRSND
Trigger: ATCATTACTCCTCCAACACCAATCATCCCAGACGAT...GAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGAGTGGATGATCGTCTaGGATGATTGGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFEWMIV*DDWCWR
Trigger: CCTCCAACACCAATCATCCCAGACGATCATCCACTC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCTCATGGAAAGCCATTTaGATGACATCCAGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISSWKAI*MTSRVD
Trigger: ATCCACTCTGGATGTCATCCAAATGGCTTTCCATGA...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp GGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCTCATGGAAAGCCATTTaGATGACATCCAGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: GITNVNFNGSDTCKGVVFSWKAI*MTSRVD
Trigger: ATCCACTCTGGATGTCATCCAAATGGCTTTCCATGA...GAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CCA 90 bp AGGAGTCCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTTCATGGAAAGCCATTTaGATGACATCCAGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: RSPVVLILKDTQPRIVFSSWKAI*MTSRVD
Trigger: ATCCACTCTGGATGTCATCCAAATGGCTTTCCATGA...AGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGGACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGTAGGCCTACAGACTTaGAGGAGTCCTGTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFVGLQT*RSPVVL
Trigger: TAGAACCACAGGACTCCTCCAAGTCTGTAGGCCTAC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp CTTCACCAGGCCACCATAAGGAAACAATGGAACAGAGCTGGTGTTTTAATATCTATGAGGTCAGTTAGATaGACTAACATGACGATTCTC +
Preference number: 4 (lower is better)
Translates to: LHQATIRKQWNRAGVLISMRSVR*TNMTIL
Trigger: GAGAATCGTCATGTTAGTCCATCTAACTGACCTCAT...AGATATTAAAACACCAGCTCTGTTCCATTGTTTCCTTATGGTGGCCTGGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR TCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAAAAGATCAATCTGGTaGCATGGTCGGTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFKRSIW*HGRSGL
Trigger: CAACCCTGACCGACCATGTCACCAGATTGATCTTTT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGGAAAGCCATTTGGATaGCATCCAGAGTGGATGATC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFGKPFG*HPEWMI
Trigger: GATCATCCACTCTGGATGTCATCCAAATGGCTTTCC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR TCA 90 bp TTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATAAACTTGGAAAGCCATTTGGATaGCATCCAGAGTGGATGATC +
Preference number: 4 (lower is better)
Translates to: FLHMGTKTLAKSYKIYKLGKPFG*HPEWMI
Trigger: GATCATCCACTCTGGATGTCATCCAAATGGCTTTCC...AAGTTTATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR TCA 90 bp CATCCGTACCCTTTTGAGTCCTTTGAAATATGTGATGACAGGACACTTTTAAAGCACAAGTCAATAGACTaGGCAGATGTACCTACCAAA +
Preference number: 4 (lower is better)
Translates to: HPYPFESFEICDDRTLLKHKSID*ADVPTK
Trigger: TTTGGTAGGTACATCTGCTCAGTCTATTGACTTGTG...CTTTAAAAGTGTCCTGTCATCACATATTTCAAAGGACTCAAAAGGGTACGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR GCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAACACAGGCGTTTTCTaGTCTGCCCACTATCACTTC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFNTGVF*SAHYHF
Trigger: GAAGTGATAGTGGGCAGAGCAGAAAACGCCTGTGTT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTATGCACTCTGTAGTCTaGAGCAAGATGCCTACGCAT +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFMHSVV*SKMPTH
Trigger: ATGCGTAGGCATCTTGCTCCAGACTACAGAGTGCAT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTATCAATCTGGTGACATaGTCGGTCAGGGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFINLVT*SVRVGK
Trigger: CTTTCCAACCCTGACCGACCATGTCACCAGATTGAT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTACTTTTCATATGTGTTaGCCCCTGCAATCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFTFHMC*PLQSQH
Trigger: GTGCTGGGATTGCAGGGGCCAACACATATGAAAAGT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR TCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGTAGTCTTTGATAATTaGCCTGTACGCTCGGTACTC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFVVFDN*PVRSVL
Trigger: GAGTACCGAGCGTACAGGTCAATTATCAAAGACTAC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGTCACAAATTTTCCCTaGGCAGCCAATTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFVTNFP*AANLCL
Trigger: CAGACACAAATTGGCTGCTCAGGGAAAATTTGTGAC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR TCA 90 bp TTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATAAACTTTATTTGAAGAAGGGCTaGACAAGCTATCTGCTCACC +
Preference number: 4 (lower is better)
Translates to: FLHMGTKTLAKSYKIYKLYLKKG*TSYLLT
Trigger: GGTGAGCAGATAGCTTGTTCAGCCCTTCTTCAAATA...AAGTTTATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR GCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAAGGTAGCATCAATATaGATGGGATTGGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISKVASI*MGLGSL
Trigger: TAAAGATCCCAATCCCATGCATATTGATGCTACCTT...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR GCA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACAAGGTAGCATCAATATaGATGGGATTGGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: FINLLLRGCLRSSGCISNKVASI*MGLGSL
Trigger: TAAAGATCCCAATCCCATGCATATTGATGCTACCTT...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR GCA 90 bp AGGAGTCCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTAAGGTAGCATCAATATaGATGGGATTGGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: RSPVVLILKDTQPRIVFSKVASI*MGLGSL
Trigger: TAAAGATCCCAATCCCATGCATATTGATGCTACCTT...AGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGGACTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR GCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCTGAGAGTGAGCAACTaGCATCTGCTCCATTTTACA +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFLRVSN*HLLHFT
Trigger: TGTAAAATGGAGCAGATGGCAGTTGCTCACTCTCAG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675701.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCCTTCTACAGAGTGGATaGGATAATCCTGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISLLQSG*DNPGYK
Trigger: TTTATAACCAGGATTATCCCATCCACTCTGTAGAAG...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp CCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTCTTCCACTTCTACAGAGTGGATaGGATAATCCTGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: PVVLILKDTQPRIVFSLPLLQSG*DNPGYK
Trigger: TTTATAACCAGGATTATCCCATCCACTCTGTAGAAG...TGGAAGAGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAGCAGCATCAAAGCATaGCTCAAACTCAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFSSIKA*LKLSCH
Trigger: GTGACAACTGAGTTTGAGCCATGCTTTGATGCTGCT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp GATCTTTGGGAAAATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTAAAGAGACAATTACCTaGTTCTACTTAGGATCTGTG +
Preference number: 4 (lower is better)
Translates to: DLWENNALLASGKMASTFKETIT*FYLGSV
Trigger: CACAGATCCTAAGTAGAACCAGGTAATTGTCTCTTT...AAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTTCCCAAAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676090.1
3UTR CAA 72 bp ATCACACATAAAAGTCACTTCTGCATCCGTACCCTTTaGAGTCCTTTGAAATATGTGATGACAGGACACTTT +
Preference number: 4 (lower is better)
Translates to: ITHKSHFCIRTL*SPLKYVMTGHF
Trigger: AAAGTGTCCTGTCATCACATATTTCAAAGGACTCAAAAGGGTACGGATGCAGAAGTGACTTTTATGTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR TCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAGTTTTATACTTCAATaGCCAGTCAATGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFSFILQ*PVNGVR
Trigger: CCTGACCCCATTGACTGGTCATTGAAGTATAAAACT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR TCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTTCCATCCTGCTTTCTTaGAAAGATCAATCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFSILLS*KDQSGD
Trigger: GTCACCAGATTGATCTTTTCAAGAAAGCAGGATGGA...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR GCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAACCTGGCTTCTCTGTaGAAAAATATCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFNLASL*KNISSS
Trigger: GCTGGAAGAGATATTTTTGCACAGAGAAGCCAGGTT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR GCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCCCAAATCTCTATCCTaGTCTGTTAAAAGCCTTAGG +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFPKSLS*SVKSLR
Trigger: CCTAAGGCTTTTAACAGAGCAGGATAGAGATTTGGG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675701.1
CDS-3UTR CCA 90 bp ATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCTGCCTTCTACAGAGTGGATaGGATAATCCTGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: ITNVNFNGSDTCKGVVFCLLQSG*DNPGYK
Trigger: TTTATAACCAGGATTATCCCATCCACTCTGTAGAAG...GCAGAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTTGGGATGATTGGTGTTaGAGGAGTAATGATAGTCCA +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFWDDWC*RSNDSP
Trigger: TGGACTATCATTACTCCTCCAACACCAATCATCCCA...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTATCGTCTGGGATGATTaGTGTTGGAGGAGTAATGAT +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFIVWDD*CWRSND
Trigger: ATCATTACTCCTCCAACACCAATCATCCCAGACGAT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTTCATGGAAAGCCATTTaGATGACATCCAGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFSWKAI*MTSRVD
Trigger: ATCCACTCTGGATGTCATCCAAATGGCTTTCCATGA...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAAACATCTTTTGAATTaGAACTTCATTGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: RFINLLLRGCLRSSGCISKHLLN*NFIGIH
Trigger: GTGGATGCCAATGAAGTTCCAATTCAAAAGATGTTT...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CCA 90 bp GATCTTTGGGAAAATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTAAACATCTTTTGAATTaGAACTTCATTGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: DLWENNALLASGKMASTFKHLLN*NFIGIH
Trigger: GTGGATGCCAATGAAGTTCCAATTCAAAAGATGTTT...AAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTTCCCAAAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CCA 90 bp CATCCGTACCCTTTTGAGTCCTTTGAAATATGTGATGACAGGACACTTTTAAAGACAATGGAACAGAGCTaGTGTTTTAATATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: HPYPFESFEICDDRTLLKTMEQS*CFNIWV
Trigger: AACCCAGATATTAAAACACCAGCTCTGTTCCATTGT...CTTTAAAAGTGTCCTGTCATCACATATTTCAAAGGACTCAAAAGGGTACGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CCA 90 bp GGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCTGTGAAATAATAACTTaGTGCCTCCAGCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: GITNVNFNGSDTCKGVVFCEIIT*CLQLFK
Trigger: TTTGAAAAGCTGGAGGCACCAAGTTATTATTTCACA...GAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAGACTTCGCATTCTTTaGCACTTCAATTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFRLRIL*HFNSES
Trigger: ACTCTCAGAATTGAAGTGCCAAAGAATGCGAAGTCT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675701.1
CDS-3UTR GCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAAGGTAGCATCAATATaGATGGGATTGGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFKVASI*MGLGSL
Trigger: TAAAGATCCCAATCCCATGCATATTGATGCTACCTT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCTTCTACAGAGTGGATaGGATAATCCTGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFLLQSG*DNPGYK
Trigger: TTTATAACCAGGATTATCCCATCCACTCTGTAGAAG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CCA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAAAGAGACAATTACCTaGTTCTACTTAGGATCTGTG +
Preference number: 4 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFKETIT*FYLGSV
Trigger: CACAGATCCTAAGTAGAACCAGGTAATTGTCTCTTT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396659.8
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CCA 90 bp TTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATAAACTTTGGGCACCAAAACGTTaGCTAAGTCATATAAGATTT +
Preference number: 4 (lower is better)
Translates to: FLHMGTKTLAKSYKIYKLWAPKR*LSHIRF
Trigger: AAATCTTATATGACTTAGCCAACGTTTTGGTGCCCA...AAGTTTATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS TCA 90 bp CGGGCAGGGAGCGAGCGAGTGCTCCACGCCGCCCGCAGGATCGAGTaGGTCACGCGGCCGCCAGACGAGGCCGGTGGCGCACGCACCCGA +
Preference number: 5 (lower is better)
Translates to: RAGSERVLHAARRIE*VTRPPDEAGGARTR
Trigger: TCGGGTGCGTGCGCCACCGGCCTCGTCTGGCGGCCGCGTGACTCACTCGATCCTGCGGGCGGCGTGGAGCACTCGCTCGCTCCCTGCCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS CCA 90 bp TCCCGCCGCGCAGACACCGCACCCGCAGCATCGCCCTGGCCCGGCTaGTCCACGCGCGGAATGTTCCTGGCCTCTGGGCCGCGTCGGTCC +
Preference number: 5 (lower is better)
Translates to: SRRADTAPAASPWPG*STRGMFLASGPRRS
Trigger: GGACCGACGCGGCCCAGAGGCCAGGAACATTCCGCGCGTGGACCAGCCGGGCCAGGGCGATGCTGCGGGTGCGGTGTCTGCGCGGCGGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000396659.8
ENST00000558163.1
ENST00000558336.5
ENST00000558362.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675974.1
ENST00000676090.1
CDS CCA 90 bp ATCGCCCTGGCCCGGCTGGTCCACGCGCGGAATGTTCCTGGCCTCTaGGCCGCGTCGGTCCAAGCCTTCCCGAGAGCGCGCCCGGAGCGG +
Preference number: 5 (lower is better)
Translates to: IALARLVHARNVPGL*AASVQAFPRARPER
Trigger: CCGCTCCGGGCGCGCTCTCGGGAAGGCTTGGACCGACGCGGCCCAGAGGCCAGGAACATTCCGCGCGTGGACCAGCCGGGCCAGGGCGAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396659.8
ENST00000558336.5
ENST00000558362.5
ENST00000674905.1
ENST00000675323.1
ENST00000675974.1
ENST00000676090.1
CDS CCA 90 bp CCGCAGCATCGCCCTGGCCCGGCTGGTCCACGCGCGGAATGTTCCTaGCCTCTGGGCCGCGTCGGTCCAAGCCTTCCCGAGAGCGCGCCC +
Preference number: 5 (lower is better)
Translates to: PQHRPGPAGPRAECS*PLGRVGPSLPESAP
Trigger: GGGCGCGCTCTCGGGAAGGCTTGGACCGACGCGGCCCAGAGGCCAGGAACATTCCGCGCGTGGACCAGCCGGGCCAGGGCGATGCTGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396659.8
ENST00000558336.5
ENST00000558362.5
ENST00000674905.1
ENST00000675323.1
ENST00000675974.1
ENST00000676090.1
CDS CCA 90 bp CGCCCGCAGGATCGAGTGAGTCACGCGGCCGCCAGACGAGGCCGGTaGCGCACGCACCCGAGATCCGATGTAGTGCACCGCCTCGGCGCC +
Preference number: 5 (lower is better)
Translates to: RPQDRVSHAAARRGR*RTHPRSDVVHRLGA
Trigger: GGCGCCGAGGCGGTGCACTACATCGGATCTCGGGTGCGTGCGCCACCGGCCTCGTCTGGCGGCCGCGTGACTCACTCGATCCTGCGGGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS CCA 90 bp AAGGGACACTCTCGTGCAATTCCGGCTAGGGAAAGCGAGGGAAGGTaGCGGCTCCGGGCAGGGAGCGAGCGAGTGCTCCACGCCGCCCGC +
Preference number: 5 (lower is better)
Translates to: KGHSRAIPARESEGR*RLRAGSERVLHAAR
Trigger: GCGGGCGGCGTGGAGCACTCGCTCGCTCCCTGCCCGGAGCCGCCACCTTCCCTCGCTTTCCCTAGCCGGAATTGCACGAGAGTGTCCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS-3UTR CAA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGAGACAGGGCAGTCCTaGGGCAGAGGCTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRETGQS*GRGSVA
Trigger: AGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCTC...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS GCA 90 bp CCAGGGCAGCCGAGGGCGGGGAGCGCAGAAACTCTGCTTACAGGCTaGACTCGCCCCGACTCCTCTCCAGACGTGGGATCCCATGTTATA +
Preference number: 5 (lower is better)
Translates to: PGQPRAGSAETLLTG*TRPDSSPDVGSHVI
Trigger: TATAACATGGGATCCCACGTCTGGAGAGGAGTCGGGGCGAGTGCAGCCTGTAAGCAGAGTTTCTGCGCTCCCCGCCCTCGGCTGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS-3UTR CAA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTGAGACAGGGCAGTCCTaGGGCAGAGGCTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPETGQS*GRGSVA
Trigger: AGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCTC...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CAA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGGAGACAGGGCAGTCCTaGGGCAGAGGCTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRETGQS*GRGSVA
Trigger: AGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCTC...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS GCA 90 bp AACGCCACCCTTTTACTAAGAGGAGCCTCCGTCGTCCCAACCCCTTaGTCCGAGCGGGAAGCTTGGTGCAGCGCACCAAGGTCCGGTAGA +
Preference number: 5 (lower is better)
Translates to: NATLLLRGASVVPTP*SEREAWCSAPRSGR
Trigger: TCTACCGGACCTTGGTGCGCTGCACCAAGCTTCCCGCTCGGAGCAAGGGGTTGGGACGACGGAGGCTCCTCTTAGTAAAAGGGTGGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS CCA 90 bp GCTGCACAGGAGTTCCGGGAGGAAGCCGTAGCTGCCTGGGTGCTCTaGAAAGTTCGCTGCACCCATCCTGTCAAGGTTCGTCCAAGCCGA +
Preference number: 5 (lower is better)
Translates to: AAQEFREEAVAAWVL*KVRCTHPVKVRPSR
Trigger: TCGGCTTGGACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCCCGGAACTCCTGTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396659.8
ENST00000558118.1
ENST00000558336.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675974.1
ENST00000676090.1
CDS-3UTR CAA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCAGAGGCTCAGTGGCTTaGTCGTCAGCTGCACAGGAG +
Preference number: 5 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLRGSVA*SSAAQE
Trigger: CTCCTGTGCAGCTGACGACAAAGCCACTGAGCCTCT...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CAA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGCATGGTCGGTCAGGGTaGGAAAGCACAATACCAGGT +
Preference number: 5 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRHGRSG*ESTIPG
Trigger: ACCTGGTATTGTGCTTTCCAACCCTGACCGACCATG...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS GCA 90 bp GGCTTTGTCGTCAGCTGCACAGGAGTTCCGGGAGGAAGCCGTAGCTaGCTGGGTGCTCTGGAAAGTTCGCTGCACCCATCCTGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: GFVVSCTGVPGGSRS*LGALESSLHPSCQG
Trigger: ACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCCCGGAACTCCTGTGCAGCTGACGACAAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396659.8
ENST00000558118.1
ENST00000558336.5
ENST00000558362.5
ENST00000558537.5
ENST00000559885.1
ENST00000560538.1
ENST00000561148.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000675974.1
ENST00000676090.1
CDS CCA 90 bp GCTGCACAGGAGTTCCGGGAGGAAGCCGTAGCTGCCTGGGTGCTCTaGAAAGTTCGCTGCACCCATCCTGTCAAGGTTCGTCCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: AAQEFREEAVAAWVL*KVRCTHPVKVRPSL
Trigger: AAGGCTTGGACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCCCGGAACTCCTGTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558537.5
CDS CCA 90 bp GCTGCACAGGAGTTCCGGGAGGAAGCCGTAGCTGCCTGGGTGCTCTaGAAAGTTCGCTGCACCCATCCTGTCAAGGTTCGTCCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: AAQEFREEAVAAWVL*KVRCTHPVKVRPSF
Trigger: GAAGCTTGGACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCCCGGAACTCCTGTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558362.5
ENST00000559885.1
ENST00000560538.1
ENST00000561148.5
CDS-3UTR CAA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCGGATGCATCTCCAACTaGTTGGGGCTACGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPGCISN*LGLRVL
Trigger: CAACACACGTAGCCCCAACAAGTTGGAGATGCATCC...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCCGGCAGGAGAATCGCTaGAACCCAGAAAGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPRQENR*NPESVG
Trigger: ACCTACACTTTCTGGGTTCAAGCGATTCTCCTGCCG...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS CCA 90 bp TTGTCGTCAGCTGCACAGGAGTTCCGGGAGGAAGCCGTAGCTGCCTaGGTGCTCTGGAAAGTTCGCTGCACCCATCCTGTCAAGGTTCGT +
Preference number: 5 (lower is better)
Translates to: LSSAAQEFREEAVAA*VLWKVRCTHPVKVR
Trigger: ACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCCCGGAACTCCTGTGCAGCTGACGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396659.8
ENST00000558118.1
ENST00000558336.5
ENST00000558362.5
ENST00000558537.5
ENST00000559885.1
ENST00000560538.1
ENST00000561148.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000675974.1
ENST00000676090.1
CDS CCA 90 bp GCTGCACAGGAGTTCCGGGAGGAAGCCGTAGCTGCCTGGGTGCTCTaGAAAGTTCGCTGCACCCATCCTGTCAAGGTTCGTCCAAGACTT +
Preference number: 5 (lower is better)
Translates to: AAQEFREEAVAAWVL*KVRCTHPVKVRPRL
Trigger: AAGTCTTGGACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCCCGGAACTCCTGTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675701.1
CDS-3UTR CAA 90 bp GACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCATGGTCGGTCAGGGTaGGAAAGCACAATACCAGGT +
Preference number: 5 (lower is better)
Translates to: DCKVPRRRTSQVQQWKPPHGRSG*ESTIPG
Trigger: ACCTGGTATTGTGCTTTCCAACCCTGACCGACCATG...AGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CAA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGTTCATGGAAAGCCATTaGGATGACATCCAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGFMESH*DDIQSG
Trigger: TCCACTCTGGATGTCATCCAAATGGCTTTCCATGAA...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CAA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGCCTCCTCCCAGGGAATaGGCATTACGAATGTTAACT +
Preference number: 5 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRPPPRE*ALRMLT
Trigger: AGTTAACATTCGTAATGCCAATTCCCTGGGAGGAGG...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CAA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGTGCATCTCCAACTTGTaGGGGCTACGTGTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRCISNL*GLRVLK
Trigger: TTTCAACACACGTAGCCCCAACAAGTTGGAGATGCA...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGCCAGGTCCAATGATGTaGAAGGTAGCATCAATATGC +
Preference number: 5 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRPGPMM*KVASIC
Trigger: GCATATTGATGCTACCTTCAACATCATTGGACCTGG...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CAA 90 bp AAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGTTCATGGAAAGCCATTaGGATGACATCCAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: KVPRRRTSQVQQWKPPPRFMESH*DDIQSG
Trigger: TCCACTCTGGATGTCATCCAAATGGCTTTCCATGAA...CCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS GCA 90 bp TTCCGGGAGGAAGCCGTAGCTGCCTGGGTGCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTTCGTCCAAGACTTCGCATTCTTTGG +
Preference number: 5 (lower is better)
Translates to: FREEAVAAWVLWKVR*THPVKVRPRLRILW
Trigger: CCAAAGAATGCGAAGTCTTGGACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCCCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675701.1
CDS CCA 90 bp CCTCTAAGGGGTCCCATTCGTTGTAAGAAGAGACAGGGCAGTCCTTaGGCAGAGGCTCAGTGGCTTTGTCGTCAGCTGCACAGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: PLRGPIRCKKRQGSP*AEAQWLCRQLHRSS
Trigger: GGAACTCCTGTGCAGCTGACGACAAAGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCTCTTCTTACAACGAATGGGACCCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000396659.8
ENST00000558118.1
ENST00000558336.5
ENST00000558362.5
ENST00000558537.5
ENST00000559885.1
ENST00000560538.1
ENST00000561148.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000675974.1
ENST00000676090.1
CDS-3UTR CAA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCTACTTTTCATATGTGTaGGCCTTCACCTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPYFSYV*AFTSMV
Trigger: CACCATCGAGGTGAAGGCCAACACATATGAAAAGTA...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
CDS-3UTR CAA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGGCCTCGATAATCTCATaGCCCACAACTATCAGGATG +
Preference number: 5 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRASIIS*PTTIRM
Trigger: CATCCTGATAGTTGTGGGCAATGAGATTATCGAGGC...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS-3UTR CAA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTGCATCTCCAACTTGTaGGGGCTACGTGTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRCISNL*GLRVLK
Trigger: TTTCAACACACGTAGCCCCAACAAGTTGGAGATGCA...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp AGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCAGGGATGGGCACCAAAACGTaGGCTAAGTCATATAAGATT +
Preference number: 5 (lower is better)
Translates to: RCLGAGHRRSSNGSLLPGMGTKT*AKSYKI
Trigger: AATCTTATATGACTTAGCCAACGTTTTGGTGCCCAT...CCCTGGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS TCA 90 bp TGGGCAGGAGGAGAACTCGGGTGGAGGCAGAAGAAAGACGGAGAATaGCAGCTGTTCAGGAACCAGTTGCTGGGAGGAAGCCAGAATGTC +
Preference number: 5 (lower is better)
Translates to: WAGGELGWRQKKDGE*QLFRNQLLGGSQNV
Trigger: GACATTCTGGCTTCCTCCCAGCAACTGGTTCCTGAACAGCTGTCATTCTCCGTCTTTCTTCTGCCTCCACCCGAGTTCTCCTCCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS GCA 90 bp TTCCGGGAGGAAGCCGTAGCTGCCTGGGTGCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTTCGTCCAAGCCTTTTACTAAGAGGA +
Preference number: 5 (lower is better)
Translates to: FREEAVAAWVLWKVR*THPVKVRPSLLLRG
Trigger: TCCTCTTAGTAAAAGGCTTGGACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCCCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558537.5
CDS GCA 90 bp TTCCGGGAGGAAGCCGTAGCTGCCTGGGTGCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTTCGTCCAAGCTTCCAAGAACAAAGA +
Preference number: 5 (lower is better)
Translates to: FREEAVAAWVLWKVR*THPVKVRPSFQEQR
Trigger: TCTTTGTTCTTGGAAGCTTGGACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCCCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558362.5
ENST00000559885.1
CDS-3UTR CAA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCTACTTTTCATATGTGTaGGCCTTCACCTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLYFSYV*AFTSMV
Trigger: CACCATCGAGGTGAAGGCCAACACATATGAAAAGTA...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
CDS-3UTR CAA 90 bp TGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCCTGCATCCGTACCCTTTaGAGTCCTTTGAAATATGTG +
Preference number: 5 (lower is better)
Translates to: CKVPRRRTSQVQQWKPPPCIRTL*SPLKYV
Trigger: CACATATTTCAAAGGACTCAAAAGGGTACGGATGCA...GGGAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CAA 90 bp GGCCTGTTCAGTCCAAGTAGGACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGAAAATAATGCCCTCCTaGCTTCTGGTAAAATGGCCA +
Preference number: 5 (lower is better)
Translates to: GLFSPSRTVRCLGAGHRRKIMPS*LLVKWP
Trigger: TGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTT...CCTGCGATGTCCGGCGCCGAGGCACCTTACAGTCCTACTTGGACTGAACAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS GCA 90 bp CTTCCTCAGAGACCTTCTCTCCTTTCCAGTCATGGAATCTGCCAGTaGCTTGTCTTTGACTTCCCAGCCTCCAGAACGAAGGTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: LPQRPSLLSSHGICQ*LVFDFPASRTKVPR
Trigger: CCTTGGGACCTTCGTTCTGGAGGCTGGGAAGTCAAAGACAAGGCACTGGCAGATTCCATGACTGGAAAGGAGAGAAGGTCTCTGAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS-3UTR CAA 90 bp AATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCGAGACAGGGCAGTCCTaGGGCAGAGGCTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: NALLASGKMASTFHMCWPETGQS*GRGSVA
Trigger: AGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCTC...GGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR CAA 90 bp CTGTACGCTCGGTACTCAAAGAAGCGTGAACGCCATGCCATGGGAGCCTCGATAGCCTCGATAATCTCATaGCCCACAACTATCAGGATG +
Preference number: 5 (lower is better)
Translates to: LYARYSKKRERHAMGASIASIIS*PTTIRM
Trigger: CATCCTGATAGTTGTGGGCAATGAGATTATCGAGGC...TATCGAGGCTCCCATGGCATGGCGTTCACGCTTCTTTGAGTACCGAGCGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CAA 90 bp ACTGTAAGGTGCCTCGGCGCCGGACATCGCAGGTCCAGCAATGGAAGCCTCCTCCAAACATCTTTTGAATaGGAACTTCATTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: TVRCLGAGHRRSSNGSLLQTSFE*ELHWHP
Trigger: TGGATGCCAATGAAGTTCCAATTCAAAAGATGTTTG...GAGGAGGCTTCCATTGCTGGACCTGCGATGTCCGGCGCCGAGGCACCTTACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000676090.1
CDS TCA 90 bp AGAACGAAGGTCCCAAGGCTGTATTCTCAGTTACGCCAAGTCACCTaGGACATTTGCACCAGAGCACCCAAAATTCTGTGCCCATGCGGA +
Preference number: 5 (lower is better)
Translates to: RTKVPRLYSQLRQVT*DICTRAPKILCPCG
Trigger: TCCGCATGGGCACAGAATTTTGGGTGCTCTGGTGCAAATGTCTCAGGTGACTTGGCGTAACTGAGAATACAGCCTTGGGACCTTCGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS TCA 90 bp ACCTTCTCTCCTTTCCAGTCATGGAATCTGCCAGTGCCTTGTCTTTaGCTTCCCAGCCTCCAGAACGAAGGTCCCAAGGCTGTATTCTCA +
Preference number: 5 (lower is better)
Translates to: TFSPFQSWNLPVPCL*LPSLQNEGPKAVFS
Trigger: TGAGAATACAGCCTTGGGACCTTCGTTCTGGAGGCTGGGAAGTCAAAGACAAGGCACTGGCAGATTCCATGACTGGAAAGGAGAGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS GCA 90 bp ATGTCACTTCCTCAGAGACCTTCTCTCCTTTCCAGTCATGGAATCTaGCAGTGCCTTGTCTTTGACTTCCCAGCCTCCAGAACGAAGGTC +
Preference number: 5 (lower is better)
Translates to: MSLPQRPSLLSSHGI*QCLVFDFPASRTKV
Trigger: GACCTTCGTTCTGGAGGCTGGGAAGTCAAAGACAAGGCACTGGCAGATTCCATGACTGGAAAGGAGAGAAGGTCTCTGAGGAAGTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS-3UTR CAA 90 bp AATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCAGAGGCTCAGTGGCTTaGTCGTCAGCTGCACAGGAG +
Preference number: 5 (lower is better)
Translates to: NALLASGKMASTFHMCWPRGSVA*SSAAQE
Trigger: CTCCTGTGCAGCTGACGACAAAGCCACTGAGCCTCT...GGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS GCA 90 bp CTTCCTCAGAGACCTTCTCTCCTTTCCAGTCATGGAATCTGCCAGTaGCTTGTCTTTGACTTCCCAGCCTCCAGAACTGAGACATTTGCA +
Preference number: 5 (lower is better)
Translates to: LPQRPSLLSSHGICQ*LVFDFPASRTETFA
Trigger: TGCAAATGTCTCAGTTCTGGAGGCTGGGAAGTCAAAGACAAGGCACTGGCAGATTCCATGACTGGAAAGGAGAGAAGGTCTCTGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561148.5
CDS GCA 90 bp ATGTCACTTCCTCAGAGACCTTCTCTCCTTTCCAGTCATGGAATCTaGCAGTGCCTTGTCTTTGACTTCCCAGCCTCCAGAACTGAGACA +
Preference number: 5 (lower is better)
Translates to: MSLPQRPSLLSSHGI*QCLVFDFPASRTET
Trigger: TGTCTCAGTTCTGGAGGCTGGGAAGTCAAAGACAAGGCACTGGCAGATTCCATGACTGGAAAGGAGAGAAGGTCTCTGAGGAAGTGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561148.5
CDS CCA 90 bp GCTTGTTTTCCAGAGTTCATGGATGGAAAGCACCAGACGAGCAGATaGCATGGTGGAAAGAGCCTCCGAGAGGGAATTAGGATAACTGAG +
Preference number: 5 (lower is better)
Translates to: ACFPEFMDGKHQTSR*HGGKSLREGIRITE
Trigger: CTCAGTTATCCTAATTCCCTCTCGGAGGCTCTTTCCACCATGCCATCTGCTCGTCTGGTGCTTTCCATCCATGAACTCTGGAAAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS-3UTR CAA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACGAGACAGGGCAGTCCTaGGGCAGAGGCTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: FINLLLRGCLRSSGCISNETGQS*GRGSVA
Trigger: AGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCTC...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS TCA 90 bp CCTTGTTCTGATGCTCACAGTCCCAAGCACCACTTCACACCTTACTaGGGAAACACATTCTCTAAGCTGCTAACATTTGGGCTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: PCSDAHSPKHHFTPY*GNTFSKLLTFGLLS
Trigger: AGAGAGCAGCCCAAATGTTAGCAGCTTAGAGAATGTGTTTCCTCAGTAAGGTGTGAAGTGGTGCTTGGGACTGTGAGCATCAGAACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561376.1
ENST00000675974.1
CDS-3UTR CAA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACAGAGGCTCAGTGGCTTaGTCGTCAGCTGCACAGGAG +
Preference number: 5 (lower is better)
Translates to: FINLLLRGCLRSSGCISNRGSVA*SSAAQE
Trigger: CTCCTGTGCAGCTGACGACAAAGCCACTGAGCCTCT...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAGAGGCTCAGTGGCTTaGTCGTCAGCTGCACAGGAG +
Preference number: 5 (lower is better)
Translates to: RFINLLLRGCLRSSGCISRGSVA*SSAAQE
Trigger: CTCCTGTGCAGCTGACGACAAAGCCACTGAGCCTCT...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp ACAAGCTATCTGCTCACCTGCAAAGGGGTGGTTTTCTGCACATGGGCACCAAAACCAGGTCCAATGATGTaGAAGGTAGCATCAATATGC +
Preference number: 5 (lower is better)
Translates to: TSYLLTCKGVVFCTWAPKPGPMM*KVASIC
Trigger: GCATATTGATGCTACCTTCAACATCATTGGACCTGG...TTTTGGTGCCCATGTGCAGAAAACCACCCCTTTGCAGGTGAGCAGATAGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CAA 90 bp ATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCTACTTTTCATATGTGTaGGCCCCTGCAATCCCAGCA +
Preference number: 5 (lower is better)
Translates to: MPSLLLVKWPVLFICVGPYFSYV*APAIPA
Trigger: TGCTGGGATTGCAGGGGCCAACACATATGAAAAGTA...GGGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR CAA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGAGACAGGGCAGTCCTaGGGCAGAGGCTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFETGQS*GRGSVA
Trigger: AGCCACTGAGCCTCTGCCCAAGGACTGCCCTGTCTC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CAA 90 bp ATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCTTCATGGAAAGCCATTaGGATGACATCCAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: MPSLLLVKWPVLFICVGPFMESH*DDIQSG
Trigger: TCCACTCTGGATGTCATCCAAATGGCTTTCCATGAA...GGGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CAA 90 bp AGTCCATCCTGCTTTCTTGAAAAGATCAATCTGGTGACATGGTCGGTCAGGGTTTACTTTTCATATGTGTaGGCCCCTGCAATCCCAGCA +
Preference number: 5 (lower is better)
Translates to: SPSCFLEKINLVTWSVRVYFSYV*APAIPA
Trigger: TGCTGGGATTGCAGGGGCCAACACATATGAAAAGTA...AACCCTGACCGACCATGTCACCAGATTGATCTTTTCAAGAAAGCAGGATGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CAA 90 bp AATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTCATATGTGTTGGCCCCCAGGTCCAATGATGTaGAAGGTAGCATCAATATGC +
Preference number: 5 (lower is better)
Translates to: NALLASGKMASTFHMCWPPGPMM*KVASIC
Trigger: GCATATTGATGCTACCTTCAACATCATTGGACCTGG...GGGCCAACACATATGAAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CAA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCCATGGTCGGTCAGGGTaGGAAAGCACAATACCAGGT +
Preference number: 5 (lower is better)
Translates to: RFINLLLRGCLRSSGCISHGRSG*ESTIPG
Trigger: ACCTGGTATTGTGCTTTCCAACCCTGACCGACCATG...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCGGATGCATCTCCAACTaGTTGGGGCTACGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: RFINLLLRGCLRSSGCISGCISN*LGLRVL
Trigger: CAACACACGTAGCCCCAACAAGTTGGAGATGCATCC...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp GGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCGGATGCATCTCCAACTaGTTGGGGCTACGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: GITNVNFNGSDTCKGVVFGCISN*LGLRVL
Trigger: CAACACACGTAGCCCCAACAAGTTGGAGATGCATCC...GAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CAA 90 bp CCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTCTTCCAAGTAGGCCTACAGACTaGGAGGAGTCCTGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: PVVLILKDTQPRIVFSLPSRPTD*EESCGS
Trigger: AGAACCACAGGACTCCTCCAAGTCTGTAGGCCTACT...TGGAAGAGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS TCA 90 bp TTTCTATGGATGAAAAAGTTGCAAACACAAGTCCCAGCCTTGTTCTaGTGCTCACAGTCCCAAGCACCACTTCACACCTTACTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: FLWMKKLQTQVPALF*CSQSQAPLHTLLRK
Trigger: TTTCCTCAGTAAGGTGTGAAGTGGTGCTTGGGACTGTGAGCATCAGAACAAGGCTGGGACTTGTGTTTGCAACTTTTTCATCCATAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561376.1
ENST00000675974.1
CDS-3UTR CAA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAGAGGCTCAGTGGCTTaGTCGTCAGCTGCACAGGAG +
Preference number: 5 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFRGSVA*SSAAQE
Trigger: CTCCTGTGCAGCTGACGACAAAGCCACTGAGCCTCT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CAA 90 bp CGTAAGGAGTTTAACTCGTTGATCTGGAAGGAGTTCAATACAGAGATCCGGACCAAAATAATGCCCTCCTaGCTTCTGGTAAAATGGCCA +
Preference number: 5 (lower is better)
Translates to: RKEFNSLIWKEFNTEIRTKIMPS*LLVKWP
Trigger: TGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTT...GGTCCGGATCTCTGTATTGAACTCCTTCCAGATCAACGAGTTAAACTCCTTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CAA 90 bp CAGCTGCCAGGTGATTTGGTGAGAAGAGTGAGTAGGAGTGACCAGTTAGGAGTTCAAACATCTTTTGAATaGGAACTTCATTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: QLPGDLVRRVSRSDQLGVQTSFE*ELHWHP
Trigger: TGGATGCCAATGAAGTTCCAATTCAAAAGATGTTTG...AACTCCTAACTGGTCACTCCTACTCACTCTTCTCACCAAATCACCTGGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CAA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCGCCTCGATAATCTCATaGCCCACAACTATCAGGATG +
Preference number: 5 (lower is better)
Translates to: RFINLLLRGCLRSSGCISASIIS*PTTIRM
Trigger: CATCCTGATAGTTGTGGGCAATGAGATTATCGAGGC...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACGCCTCGATAATCTCATaGCCCACAACTATCAGGATG +
Preference number: 5 (lower is better)
Translates to: FINLLLRGCLRSSGCISNASIIS*PTTIRM
Trigger: CATCCTGATAGTTGTGGGCAATGAGATTATCGAGGC...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp GGTGGTTTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATCCTCCTCCCAGGGAATaGGCATTACGAATGTTAACT +
Preference number: 5 (lower is better)
Translates to: GGFLHMGTKTLAKSYKIYPPPRE*ALRMLT
Trigger: AGTTAACATTCGTAATGCCAATTCCCTGGGAGGAGG...ATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAAACCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCTGCATCTCCAACTTGTaGGGGCTACGTGTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: RFINLLLRGCLRSSGCISCISNL*GLRVLK
Trigger: TTTCAACACACGTAGCCCCAACAAGTTGGAGATGCA...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp AATGACCAGTCAATGGGGTCAGGCCTCCTTACTGTCACTCCTTCCGTTTTTAAAAAGGAGTTTAACTCGTaGATCTGGAAGGAGTTCAAT +
Preference number: 5 (lower is better)
Translates to: NDQSMGSGLLTVTPSVFKKEFNS*IWKEFN
Trigger: ATTGAACTCCTTCCAGATCAACGAGTTAAACTCCTT...TTTAAAAACGGAAGGAGTGACAGTAAGGAGGCCTGACCCCATTGACTGGTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS-3UTR CAA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCTACTTTTCATATGTGTaGGCCTTCACCTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: RFINLLLRGCLRSSGCISYFSYV*AFTSMV
Trigger: CACCATCGAGGTGAAGGCCAACACATATGAAAAGTA...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp AGGAGTCCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTTACTTTTCATATGTGTaGGCCTTCACCTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: RSPVVLILKDTQPRIVFSYFSYV*AFTSMV
Trigger: CACCATCGAGGTGAAGGCCAACACATATGAAAAGTA...AGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGGACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CAA 90 bp ATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCTGCGCCTCGATAATCTCATaGCCCACAACTATCAGGATG +
Preference number: 5 (lower is better)
Translates to: ITNVNFNGSDTCKGVVFCASIIS*PTTIRM
Trigger: CATCCTGATAGTTGTGGGCAATGAGATTATCGAGGC...GCAGAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CAA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACCCAGGTCCAATGATGTaGAAGGTAGCATCAATATGC +
Preference number: 5 (lower is better)
Translates to: FINLLLRGCLRSSGCISNPGPMM*KVASIC
Trigger: GCATATTGATGCTACCTTCAACATCATTGGACCTGG...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp GGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCCCAGGTCCAATGATGTaGAAGGTAGCATCAATATGC +
Preference number: 5 (lower is better)
Translates to: GITNVNFNGSDTCKGVVFPGPMM*KVASIC
Trigger: GCATATTGATGCTACCTTCAACATCATTGGACCTGG...GAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS-3UTR CAA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCATGGTCGGTCAGGGTaGGAAAGCACAATACCAGGT +
Preference number: 5 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFHGRSG*ESTIPG
Trigger: ACCTGGTATTGTGCTTTCCAACCCTGACCGACCATG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CAA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACTTCATGGAAAGCCATTaGGATGACATCCAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: FINLLLRGCLRSSGCISNFMESH*DDIQSG
Trigger: TCCACTCTGGATGTCATCCAAATGGCTTTCCATGAA...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp CCTGTGGTTCTAATCCTTAAGGATACCCAACCCAGAATAGTATTTTCTCTTCCATTCATGGAAAGCCATTaGGATGACATCCAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: PVVLILKDTQPRIVFSLPFMESH*DDIQSG
Trigger: TCCACTCTGGATGTCATCCAAATGGCTTTCCATGAA...TGGAAGAGAAAATACTATTCTGGGTTGGGTATCCTTAAGGATTAGAACCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CAA 90 bp GATCTTTGGGAAAATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTATATTCTGTTCAACCTaGCCATTACAGGCTGTGACG +
Preference number: 5 (lower is better)
Translates to: DLWENNALLASGKMASTFIFCST*PLQAVT
Trigger: CGTCACAGCCTGTAATGGCAAGGTTGAACAGAATAT...AAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTTCCCAAAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS GCA 90 bp CAAGGTTCGTCCAAGCTTCCAAGAACAAAGAAAAGATTATTGTATTaGATTGCTCTATCAGTACTTACAGAGAGGAGGAAGTGGAGATGG +
Preference number: 5 (lower is better)
Translates to: QGSSKLPRTKKRLLY*IALSVLTERRKWRW
Trigger: CCATCTCCACTTCCTCCTCTCTGTAAGTACTGATAGAGCAATGCAATACAATAATCTTTTCTTTGTTCTTGGAAGCTTGGACGAACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558362.5
ENST00000559885.1
CDS-3UTR CAA 90 bp GATCTTTGGGAAAATAATGCCCTCCTTGCTTCTGGTAAAATGGCCAGTACTTTTAAAATAATGCCCTCCTaGCTTCTGGTAAAATGGCCA +
Preference number: 5 (lower is better)
Translates to: DLWENNALLASGKMASTFKIMPS*LLVKWP
Trigger: TGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTT...AAAAGTACTGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTTCCCAAAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000558118.1
ENST00000676090.1
CDS-3UTR CAA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACAAAATAATGCCCTCCTaGCTTCTGGTAAAATGGCCA +
Preference number: 5 (lower is better)
Translates to: FINLLLRGCLRSSGCISNKIMPS*LLVKWP
Trigger: TGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTT...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp AGATTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAAAATAATGCCCTCCTaGCTTCTGGTAAAATGGCCA +
Preference number: 5 (lower is better)
Translates to: RFINLLLRGCLRSSGCISKIMPS*LLVKWP
Trigger: TGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTT...GGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTGCCTCGATAATCTCATaGCCCACAACTATCAGGATG +
Preference number: 5 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFASIIS*PTTIRM
Trigger: CATCCTGATAGTTGTGGGCAATGAGATTATCGAGGC...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CAA 90 bp GGCATTACGAATGTTAACTTTAATGGTAGTGATACCTGCAAAGGGGTGGTTTTCATGGGCACCAAAACGTaGGCTAAGTCATATAAGATT +
Preference number: 5 (lower is better)
Translates to: GITNVNFNGSDTCKGVVFMGTKT*AKSYKI
Trigger: AATCTTATATGACTTAGCCAACGTTTTGGTGCCCAT...GAAAACCACCCCTTTGCAGGTATCACTACCATTAAAGTTAACATTCGTAATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674905.1
CDS CCA 90 bp CTAACAGTGTATGAAAGTAAACATACCGTCTGGGATGATTGGTGTTaGAGGAGTAATGATAGTCCATCCTGCTTTCTTGAAAAGATCAAT +
Preference number: 5 (lower is better)
Translates to: LTVYESKHTVWDDWC*RSNDSPSCFLEKIN
Trigger: ATTGATCTTTTCAAGAAAGCAGGATGGACTATCATTACTCCTCCAACACCAATCATCCCAGACGGTATGTTTACTTTCATACACTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561376.1
ENST00000675974.1
CDS CCA 90 bp TTTAGTCTAACAGTGTATGAAAGTAAACATACCGTCTGGGATGATTaGTGTTGGAGGAGTAATGATAGTCCATCCTGCTTTCTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: FSLTVYESKHTVWDD*CWRSNDSPSCFLEK
Trigger: CTTTTCAAGAAAGCAGGATGGACTATCATTACTCCTCCAACACCAATCATCCCAGACGGTATGTTTACTTTCATACACTGTTAGACTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561376.1
ENST00000675974.1
CDS-3UTR CAA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTTACTTTTCATATGTGTaGGCCTTCACCTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFYFSYV*AFTSMV
Trigger: CACCATCGAGGTGAAGGCCAACACATATGAAAAGTA...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
CDS-3UTR CAA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCCAGGTCCAATGATGTaGAAGGTAGCATCAATATGC +
Preference number: 5 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFPGPMM*KVASIC
Trigger: GCATATTGATGCTACCTTCAACATCATTGGACCTGG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CAA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTTTCATGGAAAGCCATTaGGATGACATCCAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFFMESH*DDIQSG
Trigger: TCCACTCTGGATGTCATCCAAATGGCTTTCCATGAA...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS-3UTR CAA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACCAAACATCTTTTGAATaGGAACTTCATTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: FINLLLRGCLRSSGCISNQTSFE*ELHWHP
Trigger: TGGATGCCAATGAAGTTCCAATTCAAAAGATGTTTG...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000674905.1
ENST00000675323.1
CDS-3UTR CAA 90 bp TTTATAAACTTATTGTTAAGGGGATGTCTCAGGAGCTCAGGATGCATCTCCAACGACAACATGTTTCATTaGTTGTACATACCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: FINLLLRGCLRSSGCISNDNMFH*LYIPSF
Trigger: AAAGCTGGGTATGTACAACAAATGAAACATGTTGTC...GTTGGAGATGCATCCTGAGCTCCTGAGACATCCCCTTAACAATAAGTTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558336.5
ENST00000675323.1
CDS-3UTR CAA 90 bp GGTGGTTTTCTGCACATGGGCACCAAAACGTTGGCTAAGTCATATAAGATTTATGACAACATGTTTCATTaGTTGTACATACCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: GGFLHMGTKTLAKSYKIYDNMFH*LYIPSF
Trigger: AAAGCTGGGTATGTACAACAAATGAAACATGTTGTC...ATAAATCTTATATGACTTAGCCAACGTTTTGGTGCCCATGTGCAGAAAACCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675323.1
CDS-3UTR CAA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTAAAATAATGCCCTCCTaGCTTCTGGTAAAATGGCCA +
Preference number: 5 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFKIMPS*LLVKWP
Trigger: TGGCCATTTTACCAGAAGCAAGGAGGGCATTATTTT...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS CCA 90 bp AGTAATTATTTTAGTCTAACAGTGTATGAAAGTAAACATACCGTCTaGGATGATTGGTGTTGGAGGAGTAATGATAGTCCATCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: SNYFSLTVYESKHTV*DDWCWRSNDSPSCF
Trigger: AAAGCAGGATGGACTATCATTACTCCTCCAACACCAATCATCCCAGACGGTATGTTTACTTTCATACACTGTTAGACTAAAATAATTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561376.1
ENST00000675974.1
CDS-3UTR CAA 90 bp AACAGAGGTAGATGGTTAATTATTAGTGGCCAAGTTACTCAGGTGACTAATTTTCAAACATCTTTTGAATaGGAACTTCATTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: NRGRWLIISGQVTQVTNFQTSFE*ELHWHP
Trigger: TGGATGCCAATGAAGTTCCAATTCAAAAGATGTTTG...AAAATTAGTCACCTGAGTAACTTGGCCACTAATAATTAACCATCTACCTCTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396659.8
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000676090.1
CDS CCA 72 bp TCCCGCCGCGCAGACACCGCACCCGCAGCATCGCCCTaGCCCGGCTGGTCCACGCGCGGAATGTTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: SRRADTAPAASP*PGWSTRGMFLA
Trigger: GGCCAGGAACATTCCGCGCGTGGACCAGCCGGGCCAGGGCGATGCTGCGGGTGCGGTGTCTGCGCGGCGGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000396659.8
ENST00000558163.1
ENST00000558336.5
ENST00000558362.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675974.1
ENST00000676090.1
CDS TCA 72 bp AGCGAGCGAGTGCTCCACGCCGCCCGCAGGATCGAGTaGGTCACGCGGCCGCCAGACGAGGCCGGTGGCGCA +
Preference number: 6 (lower is better)
Translates to: SERVLHAARRIE*VTRPPDEAGGA
Trigger: TGCGCCACCGGCCTCGTCTGGCGGCCGCGTGACTCACTCGATCCTGCGGGCGGCGTGGAGCACTCGCTCGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS CCA 72 bp GCCCGGCTGGTCCACGCGCGGAATGTTCCTGGCCTCTaGGCCGCGTCGGTCCAAGCCTTCCCGAGAGCGCGC +
Preference number: 6 (lower is better)
Translates to: ARLVHARNVPGL*AASVQAFPRAR
Trigger: GCGCGCTCTCGGGAAGGCTTGGACCGACGCGGCCCAGAGGCCAGGAACATTCCGCGCGTGGACCAGCCGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396659.8
ENST00000558336.5
ENST00000558362.5
ENST00000674905.1
ENST00000675323.1
ENST00000675974.1
ENST00000676090.1
CDS CCA 72 bp CGCCCTGGCCCGGCTGGTCCACGCGCGGAATGTTCCTaGCCTCTGGGCCGCGTCGGTCCAAGCCTTCCCGAG +
Preference number: 6 (lower is better)
Translates to: RPGPAGPRAECS*PLGRVGPSLPE
Trigger: CTCGGGAAGGCTTGGACCGACGCGGCCCAGAGGCCAGGAACATTCCGCGCGTGGACCAGCCGGGCCAGGGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000396659.8
ENST00000558336.5
ENST00000558362.5
ENST00000674905.1
ENST00000675323.1
ENST00000675974.1
ENST00000676090.1
CDS CCA 72 bp GCAGACACCGCACCCGCAGCATCGCCCTGGCCCGGCTaGTCCACGCGCGGAATGTTCCTGGCCTCTGGGCCG +
Preference number: 6 (lower is better)
Translates to: ADTAPAASPWPG*STRGMFLASGP
Trigger: CGGCCCAGAGGCCAGGAACATTCCGCGCGTGGACCAGCCGGGCCAGGGCGATGCTGCGGGTGCGGTGTCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000396659.8
ENST00000558163.1
ENST00000558336.5
ENST00000558362.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675974.1
ENST00000676090.1
CDS CCA 72 bp CCAAGGGCTGGAGCCGCAACGCAAGTTCCCCCTGACTaGGGGACGCCGCCCAGCTCCTGGAGCCTGCGAAGG +
Preference number: 6 (lower is better)
Translates to: PRAGAATQVPPD*GTPPSSWSLRR
Trigger: CCTTCGCAGGCTCCAGGAGCTGGGCGGCGTCCCCCAGTCAGGGGGAACTTGCGTTGCGGCTCCAGCCCTTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS CCA 72 bp CGTGGGCCAGCAGGCCGCGGACGCGCAGACAGCAAGTaGACCCCAAGGGCTGGAGCCGCAACGCAAGTTCCC +
Preference number: 6 (lower is better)
Translates to: RGPAGRGRADSK*TPRAGAATQVP
Trigger: GGGAACTTGCGTTGCGGCTCCAGCCCTTGGGGTCCACTTGCTGTCTGCGCGTCCGCGGCCTGCTGGCCCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS CCA 72 bp GATCGAGTGAGTCACGCGGCCGCCAGACGAGGCCGGTaGCGCACGCACCCGAGATCCGATGTAGTGCACCGC +
Preference number: 6 (lower is better)
Translates to: DRVSHAAARRGR*RTHPRSDVVHR
Trigger: GCGGTGCACTACATCGGATCTCGGGTGCGTGCGCCACCGGCCTCGTCTGGCGGCCGCGTGACTCACTCGATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS GCA 72 bp CCGAGGGCGGGGAGCGCAGAAACTCTGCTTACAGGCTaGACTCGCCCCGACTCCTCTCCAGACGTGGGATCC +
Preference number: 6 (lower is better)
Translates to: PRAGSAETLLTG*TRPDSSPDVGS
Trigger: GGATCCCACGTCTGGAGAGGAGTCGGGGCGAGTGCAGCCTGTAAGCAGAGTTTCTGCGCTCCCCGCCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS CCA 72 bp TCTCGTGCAATTCCGGCTAGGGAAAGCGAGGGAAGGTaGCGGCTCCGGGCAGGGAGCGAGCGAGTGCTCCAC +
Preference number: 6 (lower is better)
Translates to: SRAIPARESEGR*RLRAGSERVLH
Trigger: GTGGAGCACTCGCTCGCTCCCTGCCCGGAGCCGCCACCTTCCCTCGCTTTCCCTAGCCGGAATTGCACGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS CCA 72 bp CAAGTTCCCCCTGACTGGGGGACGCCGCCCAGCTCCTaGAGCCTGCGAAGGCTCTTGAAGCTGAGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: QVPPDWGTPPSS*SLRRLLKLSFP
Trigger: TGGGAAGCTCAGCTTCAAGAGCCTTCGCAGGCTCCAGGAGCTGGGCGGCGTCCCCCAGTCAGGGGGAACTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS GCA 72 bp GTCAGCTGCACAGGAGTTCCGGGAGGAAGCCGTAGCTaGCTGGGTGCTCTGGAAAGTTCGCTGCACCCATCC +
Preference number: 6 (lower is better)
Translates to: VSCTGVPGGSRS*LGALESSLHPS
Trigger: GGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCCCGGAACTCCTGTGCAGCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396659.8
ENST00000558118.1
ENST00000558336.5
ENST00000558362.5
ENST00000558537.5
ENST00000559885.1
ENST00000560538.1
ENST00000561148.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000675974.1
ENST00000676090.1
CDS CCA 72 bp GCTGCACAGGAGTTCCGGGAGGAAGCCGTAGCTGCCTaGGTGCTCTGGAAAGTTCGCTGCACCCATCCTGTC +
Preference number: 6 (lower is better)
Translates to: AAQEFREEAVAA*VLWKVRCTHPV
Trigger: GACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCCCGGAACTCCTGTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396659.8
ENST00000558118.1
ENST00000558336.5
ENST00000558362.5
ENST00000558537.5
ENST00000559885.1
ENST00000560538.1
ENST00000561148.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000675974.1
ENST00000676090.1
CDS GCA 72 bp CTTTTACTAAGAGGAGCCTCCGTCGTCCCAACCCCTTaGTCCGAGCGGGAAGCTTGGTGCAGCGCACCAAGG +
Preference number: 6 (lower is better)
Translates to: LLLRGASVVPTP*SEREAWCSAPR
Trigger: CCTTGGTGCGCTGCACCAAGCTTCCCGCTCGGAGCAAGGGGTTGGGACGACGGAGGCTCCTCTTAGTAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558362.5
ENST00000558537.5
CDS CAA 72 bp CCTTTTACTAAGAGGAGCCTCCGTCGTCCCAACCCCTaGCTCCGAGCGGGAAGCTTGGTGCAGCGCACCAAG +
Preference number: 6 (lower is better)
Translates to: PFTKRSLRRPNP*LRAGSLVQRTK
Trigger: CTTGGTGCGCTGCACCAAGCTTCCCGCTCGGAGCAAGGGGTTGGGACGACGGAGGCTCCTCTTAGTAAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558362.5
ENST00000558537.5
CDS CAA 90 bp CACCAACGCTCTACCCAGAGGCCCGAGCGTCGTCTAACGTTTCCATaGGCCCTTTCGGCCTTCACTCAGCTGCTAGCAACGCAGTCTGCC +
Preference number: 6 (lower is better)
Translates to: HQRSTQRPERRLTFP*ALSAFTQLLATQSA
Trigger: GGCAGACTGCGTTGCTAGCAGCTGAGTGAAGGCCGAAAGGGCCAATGGAAACGTTAGACGACGCTCGGGCCTCTGGGTAGAGCGTTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS CCA 72 bp GAGTTCCGGGAGGAAGCCGTAGCTGCCTGGGTGCTCTaGAAAGTTCGCTGCACCCATCCTGTCAAGGTTCGT +
Preference number: 6 (lower is better)
Translates to: EFREEAVAAWVL*KVRCTHPVKVR
Trigger: ACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTCCTCCCGGAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396659.8
ENST00000558118.1
ENST00000558336.5
ENST00000558362.5
ENST00000558537.5
ENST00000559885.1
ENST00000560538.1
ENST00000561148.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000675974.1
ENST00000676090.1
CDS GCA 72 bp GAAGCCGTAGCTGCCTGGGTGCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTTCGTCCAAGCCGAGAT +
Preference number: 6 (lower is better)
Translates to: EAVAAWVLWKVR*THPVKVRPSRD
Trigger: ATCTCGGCTTGGACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396659.8
ENST00000558118.1
ENST00000558336.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675974.1
ENST00000676090.1
CDS GCA 72 bp GAAGCCGTAGCTGCCTGGGTGCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTTCGTCCAAGACTTCGC +
Preference number: 6 (lower is better)
Translates to: EAVAAWVLWKVR*THPVKVRPRLR
Trigger: GCGAAGTCTTGGACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675701.1
CDS CCA 72 bp CGACTCCTCTCCAGACGTGGGATCCCATGTTATACTTaGAGTGAATCTGGTCGCTCGCTCCCCGTCCCCGAT +
Preference number: 6 (lower is better)
Translates to: RLLSRRGIPCYT*SESGRSLPVPD
Trigger: ATCGGGGACGGGGAGCGAGCGACCAGATTCACTCCAAGTATAACATGGGATCCCACGTCTGGAGAGGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS CAA 72 bp TCTACCCAGAGGCCCGAGCGTCGTCTAACGTTTCCATaGGCCCTTTCGGCCTTCACTCAGCTGCTAGCAACG +
Preference number: 6 (lower is better)
Translates to: STQRPERRLTFP*ALSAFTQLLAT
Trigger: CGTTGCTAGCAGCTGAGTGAAGGCCGAAAGGGCCAATGGAAACGTTAGACGACGCTCGGGCCTCTGGGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS GCA 72 bp GAAGCCGTAGCTGCCTGGGTGCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTTCGTCCAAGCTTCCAA +
Preference number: 6 (lower is better)
Translates to: EAVAAWVLWKVR*THPVKVRPSFQ
Trigger: TTGGAAGCTTGGACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558362.5
ENST00000559885.1
CDS GCA 72 bp GAAGCCGTAGCTGCCTGGGTGCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTTCGTCCAAGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: EAVAAWVLWKVR*THPVKVRPSFC
Trigger: ACAGAAGCTTGGACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560538.1
ENST00000561148.5
CDS GCA 72 bp GAAGCCGTAGCTGCCTGGGTGCTCTGGAAAGTTCGCTaGACCCATCCTGTCAAGGTTCGTCCAAGCCTTTTA +
Preference number: 6 (lower is better)
Translates to: EAVAAWVLWKVR*THPVKVRPSLL
Trigger: TAAAAGGCTTGGACGAACCTTGACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558537.5
CDS CCA 72 bp CCAGAGTTCATGGATGGAAAGCACCAGACGAGCAGATaGCATGGTGGAAAGAGCCTCCGAGAGGGAATTAGG +
Preference number: 6 (lower is better)
Translates to: PEFMDGKHQTSR*HGGKSLREGIR
Trigger: CCTAATTCCCTCTCGGAGGCTCTTTCCACCATGCCATCTGCTCGTCTGGTGCTTTCCATCCATGAACTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS CCA 72 bp GAAACCCCGTCTCTACTTCACCTCGATGGTGAACGGTaGAACACAGGCGTTTTCTGCTCTGCCCACTATCAC +
Preference number: 6 (lower is better)
Translates to: ETPSLLHLDGER*NTGVFCSAHYH
Trigger: GTGATAGTGGGCAGAGCAGAAAACGCCTGTGTTCCACCGTTCACCATCGAGGTGAAGTAGAGACGGGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558118.1
CDS CAA 72 bp TCCTTTCCAGTCATGGAATCTGCCAGTGCCTTGTCTTaGACTTCCCAGCCTCCAGAACGAAGGTCCCAAGGC +
Preference number: 6 (lower is better)
Translates to: SFPVMESASALS*TSQPPERRSQG
Trigger: GCCTTGGGACCTTCGTTCTGGAGGCTGGGAAGTCAAAGACAAGGCACTGGCAGATTCCATGACTGGAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS GCA 72 bp CCTCAGAGACCTTCTCTCCTTTCCAGTCATGGAATCTaGCAGTGCCTTGTCTTTGACTTCCCAGCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: PQRPSLLSSHGI*QCLVFDFPASR
Trigger: TCTGGAGGCTGGGAAGTCAAAGACAAGGCACTGGCAGATTCCATGACTGGAAAGGAGAGAAGGTCTCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458245.5
ENST00000561148.5
CDS CCA 72 bp CAGACACCTGTAACGAAGACCATCTCGGGAAAGCTCTaGGTTAGGCAACTCGATTTCACGAAAGCGGACACC +
Preference number: 6 (lower is better)
Translates to: QTPVTKTISGKL*VRQLDFTKADT
Trigger: GGTGTCCGCTTTCGTGAAATCGAGTTGCCTAACCCAGAGCTTTCCCGAGATGGTCTTCGTTACAGGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS CCA 72 bp AAGACGGAGAATGACAGCTGTTCAGGAACCAGTTGCTaGGAGGAAGCCAGAATGTCGGAGCGATTCCAGTAC +
Preference number: 6 (lower is better)
Translates to: KTENDSCSGTSC*EEARMSERFQY
Trigger: GTACTGGAATCGCTCCGACATTCTGGCTTCCTCCCAGCAACTGGTTCCTGAACAGCTGTCATTCTCCGTCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS CAA 90 bp GACCTTCTCTCCTTTCCAGTCATGGAATCTGCCAGTGCCTTGTCTTaGACTTCCCAGCCTCCAGAACGAAGGTCCCAAGGCTGTATTCTC +
Preference number: 6 (lower is better)
Translates to: DLLSFPVMESASALS*TSQPPERRSQGCIL
Trigger: GAGAATACAGCCTTGGGACCTTCGTTCTGGAGGCTGGGAAGTCAAAGACAAGGCACTGGCAGATTCCATGACTGGAAAGGAGAGAAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS CAA 90 bp GACCTTCTCTCCTTTCCAGTCATGGAATCTGCCAGTGCCTTGTCTTaGACTTCCCAGCCTCCAGAACTGAGACATTTGCACCAGAGCACC +
Preference number: 6 (lower is better)
Translates to: DLLSFPVMESASALS*TSQPPELRHLHQST
Trigger: GGTGCTCTGGTGCAAATGTCTCAGTTCTGGAGGCTGGGAAGTCAAAGACAAGGCACTGGCAGATTCCATGACTGGAAAGGAGAGAAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561148.5
CDS TCA 72 bp CATGTGAATAGCCTTCCTTTACCTTCACCTCGATGGTaGACGGTGGAACACAGGCGTTTTCTGCTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: HVNSLPLPSPRW*TVEHRRFLLCP
Trigger: TGGGCAGAGCAGAAAACGCCTGTGTTCCACCGTTCACCATCGAGGTGAAGGTAAAGGAAGGCTATTCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS GCA 72 bp AGACCTTCTCTCCTTTCCAGTCATGGAATCTGCCAGTaGCTTGTCTTTGACTTCCCAGCCTCCAGAACGAAG +
Preference number: 6 (lower is better)
Translates to: RPSLLSSHGICQ*LVFDFPASRTK
Trigger: CTTCGTTCTGGAGGCTGGGAAGTCAAAGACAAGGCACTGGCAGATTCCATGACTGGAAAGGAGAGAAGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS GCA 72 bp AGACCTTCTCTCCTTTCCAGTCATGGAATCTGCCAGTaGCTTGTCTTTGACTTCCCAGCCTCCAGAACTGAG +
Preference number: 6 (lower is better)
Translates to: RPSLLSSHGICQ*LVFDFPASRTE
Trigger: CTCAGTTCTGGAGGCTGGGAAGTCAAAGACAAGGCACTGGCAGATTCCATGACTGGAAAGGAGAGAAGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561148.5
CDS CCA 72 bp TTCATATGTGTTGGCCTTCACCTCGATGGTGAACGGTaGAACACAGGCGTTTTCTGCTCTGCCCACTATCAC +
Preference number: 6 (lower is better)
Translates to: FICVGLHLDGER*NTGVFCSAHYH
Trigger: GTGATAGTGGGCAGAGCAGAAAACGCCTGTGTTCCACCGTTCACCATCGAGGTGAAGGCCAACACATATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000396659.8
ENST00000558336.5
ENST00000558362.5
ENST00000558537.5
ENST00000559885.1
ENST00000561148.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000675974.1
CDS CCA 72 bp ATAGCCTTCCTTTACCTTCACCTCGATGGTGAACGGTaGAACACAGGCGTTTTCTGCTCTGCCCACTATCAC +
Preference number: 6 (lower is better)
Translates to: IAFLYLHLDGER*NTGVFCSAHYH
Trigger: GTGATAGTGGGCAGAGCAGAAAACGCCTGTGTTCCACCGTTCACCATCGAGGTGAAGGTAAAGGAAGGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676090.1
CDS CAA 72 bp GCTGTATTCTCAGTTACGCCAAGTCACCTGAGACATTaGCACCAGAGCACCCAAAATTCTGTGCCCATGCGG +
Preference number: 6 (lower is better)
Translates to: AVFSVTPSHLRH*HQSTQNSVPMR
Trigger: CCGCATGGGCACAGAATTTTGGGTGCTCTGGTGCAAATGTCTCAGGTGACTTGGCGTAACTGAGAATACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS CAA 90 bp GGTCCCAAGGCTGTATTCTCAGTTACGCCAAGTCACCTGAGACATTaGCACCAGAGCACCCAAAATTCTGTGCCCATGCGGATAGTTAGA +
Preference number: 6 (lower is better)
Translates to: GPKAVFSVTPSHLRH*HQSTQNSVPMRIVR
Trigger: TCTAACTATCCGCATGGGCACAGAATTTTGGGTGCTCTGGTGCAAATGTCTCAGGTGACTTGGCGTAACTGAGAATACAGCCTTGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS TCA 72 bp AGTACTTTTCATATGTGTTGGCCTTCACCTCGATGGTaGACGGTGGAACACAGGCGTTTTCTGCTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: STFHMCWPSPRW*TVEHRRFLLCP
Trigger: TGGGCAGAGCAGAAAACGCCTGTGTTCCACCGTTCACCATCGAGGTGAAGGCCAACACATATGAAAAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000396659.8
ENST00000558336.5
ENST00000558362.5
ENST00000558537.5
ENST00000559885.1
ENST00000561148.5
ENST00000674905.1
ENST00000675158.1
ENST00000675323.1
ENST00000675701.1
ENST00000675974.1
CDS TCA 72 bp GTCCCAAGGCTGTATTCTCAGTTACGCCAAGTCACCTaGGACATTTGCACCAGAGCACCCAAAATTCTGTGC +
Preference number: 6 (lower is better)
Translates to: VPRLYSQLRQVT*DICTRAPKILC
Trigger: GCACAGAATTTTGGGTGCTCTGGTGCAAATGTCTCAGGTGACTTGGCGTAACTGAGAATACAGCCTTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS CAA 72 bp ATCCCGTGGACTTTCCTGAGTGATAGGAGCAGTCTTTaGTTCTACCAAGGCAATTCTTGCCCGGCTCCTAGA +
Preference number: 6 (lower is better)
Translates to: IPWTFLSDRSSL*FYQGNSCPAPR
Trigger: TCTAGGAGCCGGGCAAGAATTGCCTTGGTAGAACAAAAGACTGCTCCTATCACTCAGGAAAGTCCACGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527933.2
CDS CAA 72 bp TCCTTTCCAGTCATGGAATCTGCCAGTGCCTTGTCTTaGACTTCCCAGCCTCCAGAACTGAGACATTTGCAC +
Preference number: 6 (lower is better)
Translates to: SFPVMESASALS*TSQPPELRHLH
Trigger: GTGCAAATGTCTCAGTTCTGGAGGCTGGGAAGTCAAAGACAAGGCACTGGCAGATTCCATGACTGGAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561148.5
CDS TCA 72 bp GATGCTCACAGTCCCAAGCACCACTTCACACCTTACTaGGGAAACACATTCTCTAAGCTGCTAACATTTGGG +
Preference number: 6 (lower is better)
Translates to: DAHSPKHHFTPY*GNTFSKLLTFG
Trigger: CCCAAATGTTAGCAGCTTAGAGAATGTGTTTCCTCAGTAAGGTGTGAAGTGGTGCTTGGGACTGTGAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561376.1
ENST00000675974.1
CDS TCA 72 bp ATGAAAAAGTTGCAAACACAAGTCCCAGCCTTGTTCTaGTGCTCACAGTCCCAAGCACCACTTCACACCTTA +
Preference number: 6 (lower is better)
Translates to: MKKLQTQVPALF*CSQSQAPLHTL
Trigger: TAAGGTGTGAAGTGGTGCTTGGGACTGTGAGCATCAGAACAAGGCTGGGACTTGTGTTTGCAACTTTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561376.1
ENST00000675974.1
CDS CCA 72 bp TTTGGTATCTCAAGCTTGTTTTCCAGAGTTCATGGATaGAAAGCACCAGACGAGCAGATGGCATGGTGGAAA +
Preference number: 6 (lower is better)
Translates to: FGISSLFSRVHG*KAPDEQMAWWK
Trigger: TTTCCACCATGCCATCTGCTCGTCTGGTGCTTTCCATCCATGAACTCTGGAAAACAAGCTTGAGATACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458245.5
CDS GCA 72 bp CCATACACCCCCATCTTTATCTCAGAATGCAATTCCTaGACTCAAGCTTTAAGCAACTGTTTTGCAGATGGG +
Preference number: 6 (lower is better)
Translates to: PYTPIFISECNS*TQALSNCFADG
Trigger: CCCATCTGCAAAACAGTTGCTTAAAGCTTGAGTGCAGGAATTGCATTCTGAGATAAAGATGGGGGTGTATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558362.5
CDS TCA 72 bp TTCATGGAAAGCCATTTGGATGACATCCAGAGTGGATaGTCTAAAAACAGCAACAACGTCTGGGATGATTGG +
Preference number: 6 (lower is better)
Translates to: FMESHLDDIQSG*SKNSNNVWDDW
Trigger: CCAATCATCCCAGACGTTGTTGCTGTTTTTAGATCATCCACTCTGGATGTCATCCAAATGGCTTTCCATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675158.1
CDS CAA 90 bp TCCTGTCAAGGTTCGTCCAAGCTTCCAAGAACAAAGAAAAGATTATaGTATTGCATTGCTCTATCAGTACTTACAGAGAGGAGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: SCQGSSKLPRTKKRL*YCIALSVLTERRKW
Trigger: CCACTTCCTCCTCTCTGTAAGTACTGATAGAGCAATGCAATACAATAATCTTTTCTTTGTTCTTGGAAGCTTGGACGAACCTTGACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558362.5
ENST00000559885.1
CDS CCA 72 bp TATGAAAGTAAACATACCGTCTGGGATGATTGGTGTTaGAGGAGTAATGATAGTCCATCCTGCTTTCTTGAA +
Preference number: 6 (lower is better)
Translates to: YESKHTVWDDWC*RSNDSPSCFLE
Trigger: TTCAAGAAAGCAGGATGGACTATCATTACTCCTCCAACACCAATCATCCCAGACGGTATGTTTACTTTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561376.1
ENST00000675974.1
CDS CCA 72 bp TTTAGTCTAACAGTGTATGAAAGTAAACATACCGTCTaGGATGATTGGTGTTGGAGGAGTAATGATAGTCCA +
Preference number: 6 (lower is better)
Translates to: FSLTVYESKHTV*DDWCWRSNDSP
Trigger: TGGACTATCATTACTCCTCCAACACCAATCATCCCAGACGGTATGTTTACTTTCATACACTGTTAGACTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561376.1
ENST00000675974.1
CDS CAA 72 bp GGTTCGTCCAAGCTTCCAAGAACAAAGAAAAGATTATaGTATTGCATTGCTCTATCAGTACTTACAGAGAGG +
Preference number: 6 (lower is better)
Translates to: GSSKLPRTKKRL*YCIALSVLTER
Trigger: CCTCTCTGTAAGTACTGATAGAGCAATGCAATACAATAATCTTTTCTTTGTTCTTGGAAGCTTGGACGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558362.5
ENST00000559885.1
CDS TCA 72 bp CATTTGTTGTACATACCCAGCTTTTCAAACATCTTTTaGATTGGAACTTCATTGGCATCCACCATAACACGT +
Preference number: 6 (lower is better)
Translates to: HLLYIPSFSNIF*IGTSLASTITR
Trigger: ACGTGTTATGGTGGATGCCAATGAAGTTCCAATTCAAAAGATGTTTGAAAAGCTGGGTATGTACAACAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558336.5
ENST00000675323.1
ENST00000675974.1