RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GATAD2B (Homo sapiens)

Ensembl gene IDs: ENSG00000143614

Ensembl transcript IDs: ENST00000368655.5, ENST00000576342.2, ENST00000634401.1, ENST00000634408.1, ENST00000634544.1, ENST00000634564.1, ENST00000634645.1, ENST00000634791.1, ENST00000636014.1, ENST00000637918.1

Found 777 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGGGGATAGGGAGGGTGGGCAGGTTAGGGTAGGGAGTGGGCTCTaGCAAGGCAGTGCTGGTGACCCGGAGGGACTACTCCAGGGTGGG +
Preference number: 1 (lower is better)
Translates to: LGDREGGQVRVGSGL*QGSAGDPEGLLQGG
Trigger: CCCACCCTGGAGTAGTCCCTCCGGGTCACCAGCACTGCCTTGGCAGAGCCCACTCCCTACCCTAACCTGCCCACCCTCCCTATCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 90 bp TTCAATTGTCAACCACCCTTAAGGGCTCTGTGGTTGGCTGTGAGATaGGGCTTGAGGCCTAGTCCCCGCCCTCAGATGACTAGAGGCATA +
Preference number: 1 (lower is better)
Translates to: FNCQPPLRALWLAVR*GLRPSPRPQMTRGI
Trigger: TATGCCTCTAGTCATCTGAGGGCGGGGACTAGGCCTCAAGCCCCATCTCACAGCCAACCACAGAGCCCTTAAGGGTGGTTGACAATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR TCA 90 bp CTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTaGAATAAAGGGGAGGTGGCAGGGCAGGGCGTGTGTTTTCTTGCT +
Preference number: 1 (lower is better)
Translates to: LKREDRAAEEQIAAV*NKGEVAGQGVCFLA
Trigger: AGCAAGAAAACACACGCCCTGCCCTGCCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
3UTR TCA 90 bp ACTCTGGCAGCTTCTGGAGCCAGAGAGGCAGGTGGGTGTACACTATaGGAAGAGCAGAAACCCGTACCTTTAAGGGGCTTCCCTTACTTC +
Preference number: 1 (lower is better)
Translates to: TLAASGAREAGGCTL*EEQKPVPLRGFPYF
Trigger: GAAGTAAGGGAAGCCCCTTAAAGGTACGGGTTTCTGCTCTTCTCATAGTGTACACCCACCTGCCTCTCTGGCTCCAGAAGCTGCCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR TCA 90 bp CTGAGCTTGGGGAGAGGGAGACGTAACAGAAATGGCACTTCATCATaGGGGAGGGAGGAAGAGGCTAGACAGACATGCCACAAGGCAAGA +
Preference number: 1 (lower is better)
Translates to: LSLGRGRRNRNGTSS*GREEEARQTCHKAR
Trigger: TCTTGCCTTGTGGCATGTCTGTCTAGCCTCTTCCTCCCTCCCTCATGATGAAGTGCCATTTCTGTTACGTCTCCCTCTCCCCAAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR TCA 90 bp CGCCCTCAGATGACTAGAGGCATAAAGGCAAAGATGTCACTGGTCTaGTGCCCTGGACATGACTCTGCTGCCTCTCCCAAATCAAGGGTA +
Preference number: 1 (lower is better)
Translates to: RPQMTRGIKAKMSLV*CPGHDSAASPKSRV
Trigger: TACCCTTGATTTGGGAGAGGCAGCAGAGTCATGTCCAGGGCATCAGACCAGTGACATCTTTGCCTTTATGCCTCTAGTCATCTGAGGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 90 bp GGTTTTGCCATGAGCTGTTTGGCTTTGAGCAGTTGGTTCTGCAGCTaGTGCAGCAGAGTAAGGACAGGACTCCAACCTGATTGTGTACCC +
Preference number: 1 (lower is better)
Translates to: GFAMSCLALSSWFCS*CSRVRTGLQPDCVP
Trigger: GGGTACACAATCAGGTTGGAGTCCTGTCCTTACTCTGCTGCACCAGCTGCAGAACCAACTGCTCAAAGCCAAACAGCTCATGGCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 90 bp CTGCTTTTAGTGCCTCTGGGGATGGAGGAAGCCAGGCAGAACTGGTaGGATCCTCACTCTACTAATAATGCTCCAAACAGAGGGTCTTTC +
Preference number: 1 (lower is better)
Translates to: LLLVPLGMEEARQNW*DPHSTNNAPNRGSF
Trigger: GAAAGACCCTCTGTTTGGAGCATTATTAGTAGAGTGAGGATCCCACCAGTTCTGCCTGGCTTCCTCCATCCCCAGAGGCACTAAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 90 bp ATACTGCTTTTAGTGCCTCTGGGGATGGAGGAAGCCAGGCAGAACTaGTGGGATCCTCACTCTACTAATAATGCTCCAAACAGAGGGTCT +
Preference number: 1 (lower is better)
Translates to: ILLLVPLGMEEARQN*WDPHSTNNAPNRGS
Trigger: AGACCCTCTGTTTGGAGCATTATTAGTAGAGTGAGGATCCCACCAGTTCTGCCTGGCTTCCTCCATCCCCAGAGGCACTAAAAGCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 90 bp ATAATTTTGGGCTGGTTGGCCTGGAATAGACTTCCGTGTTCCCAATaGGGTCAGGAGATCGGTCTTATTTCCCCAAGATACAGAAAGGCA +
Preference number: 1 (lower is better)
Translates to: IILGWLAWNRLPCSQ*GQEIGLISPRYRKA
Trigger: TGCCTTTCTGTATCTTGGGGAAATAAGACCGATCTCCTGACCCCATTGGGAACACGGAAGTCTATTCCAGGCCAACCAGCCCAAAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 90 bp ATTTCCTCCTGTTGTCACTTGACTCATTTATGTCCACCCAACTTGTaGGACACCCAGCAAACAGCCTTGGAACAGCCGTTCCTCTGTATT +
Preference number: 1 (lower is better)
Translates to: ISSCCHLTHLCPPNL*DTQQTALEQPFLCI
Trigger: AATACAGAGGAACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTCAAGTGACAACAGGAGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 90 bp CATGACTCTGCTGCCTCTCCCAAATCAAGGGTAACCATAGAGGACTaGCAGTTCTCCAAGAGCATTGTCATACACATAACCACTTCAACG +
Preference number: 1 (lower is better)
Translates to: HDSAASPKSRVTIED*QFSKSIVIHITTST
Trigger: CGTTGAAGTGGTTATGTGTATGACAATGCTCTTGGAGAACTGCCAGTCCTCTATGGTTACCCTTGATTTGGGAGAGGCAGCAGAGTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR TCA 90 bp AGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTTaGCTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAG +
Preference number: 1 (lower is better)
Translates to: RNPFFRLSLFPPVVT*LIYVHPTCGTPSKQ
Trigger: CTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTCAAGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 90 bp CACTCAGAGGGTGAAAGAATAGGCAAATATGCGAATCTCAACTGTTaGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTT +
Preference number: 1 (lower is better)
Translates to: HSEGERIGKYANLNC*KRNPFFRLSLFPPV
Trigger: AACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACAGTTGAGATTCGCATATTTGCCTATTCTTTCACCCTCTGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 90 bp TTACCCAGTCTCTTCAACAATTCAATGACATATAAGGGTGAGGGTTaGGGGTGTTTGCCTTTGATAAGATCATTAAGAGACACAATAATC +
Preference number: 1 (lower is better)
Translates to: LPSLFNNSMTYKGEG*GCLPLIRSLRDTII
Trigger: GATTATTGTGTCTCTTAATGATCTTATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAAGAGACTGGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
3UTR-3UTR TCA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGGGCATCTCGTACCTCTaGGCACCTCTGAGCTTGGGG +
Preference number: 2 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGGISYL*APLSLG
Trigger: CCCCAAGCTCAGAGGTGCTCAGAGGTACGAGATGCC...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGTTGGCTTTGAGCAGTTaGTTCTGCAGCTGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGLALSS*FCSWCS
Trigger: GCTGCACCAGCTGCAGAACCAACTGCTCAAAGCCAA...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGGGCATCTCGTACCTCTaGGCACCTCTGAGCTTGGGG +
Preference number: 2 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMGISYL*APLSLG
Trigger: CCCCAAGCTCAGAGGTGCTCAGAGGTACGAGATGCC...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGCCACCATCTCCCCTGTaGCCTCAGCACCTAAGCAGG +
Preference number: 2 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMPPSPL*PQHLSR
Trigger: CCTGCTTAGGTGCTGAGGTCACAGGGGAGATGGTGG...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGAAACAATTTATCCAGTaGTTTCAAAGCACAGAGGGC +
Preference number: 2 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGKQFIQ*FQSTEG
Trigger: GCCCTCTGTGCTTTGAAAGCACTGGATAAATTGTTT...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTGAAATAAAGGGGAGGTaGCAGGGCAGGGCGTGTGTT +
Preference number: 2 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSREIKGR*QGRACV
Trigger: AACACACGCCCTGCCCTGCCACCTCCCCTTTATTTC...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGGACAGGACTCCAACCTaGTTGTGTACCCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: QWEATICTAEVLSWFCHEDRTPT*LCTPSL
Trigger: GAGGCTGGGGGTACACAATCAGGTTGGAGTCCTGTC...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTCCACCATCTCCCCTGTaGCCTCAGCACCTAAGCAGG +
Preference number: 2 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGPPSPL*PQHLSR
Trigger: CCTGCTTAGGTGCTGAGGTCACAGGGGAGATGGTGG...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp CCCAGTCTCTTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGTCACCCAGGCTGGAGTaGAGGGCGCTTTCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: PSLFNNSMTYKGEGWGCLSPRLE*RALSWL
Trigger: GAGCCAAGAAAGCGCCCTGCACTCCAGCCTGGGTGA...CAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAAGAGACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
3UTR-3UTR CCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTCTTCCGTGTTCCCAATaGGGTCAGGAGATCGGTCTT +
Preference number: 2 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRLPCSQ*GQEIGL
Trigger: AAGACCGATCTCCTGACCCCATTGGGAACACGGAAG...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATCACCAGTACAGGCACTaGATGCGACAGAAGTTGGGG +
Preference number: 2 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDHQYRH*MRQKLG
Trigger: CCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTG...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
3UTR-3UTR CCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGGAAATAAAGGGGAGGTaGCAGGGCAGGGCGTGTGTT +
Preference number: 2 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMEIKGR*QGRACV
Trigger: AACACACGCCCTGCCCTGCCACCTCCCCTTTATTTC...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGGTCCTACTTGGCAGCTaGGACCCCTACTGCAATCTG +
Preference number: 2 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMVLLGS*DPYCNL
Trigger: CAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGAC...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGAACCCCATTCTAAGGTaGCCTGGCTCCCAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMNPILR*PGSQGK
Trigger: CTTTCCCTGGGAGCCAGGCCACCTTAGAATGGGGTT...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAATGGTTGGCTGTGAGATaGGGCTTGAGGCCTAGTCCC +
Preference number: 2 (lower is better)
Translates to: EERRQNVGCVCALLFYHQWLAVR*GLRPSP
Trigger: GGGACTAGGCCTCAAGCCCCATCTCACAGCCAACCA...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGGTTTAACCGTCCACTaGACAAAGGGAGGACACACA +
Preference number: 2 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTGLTVH*TKGGHT
Trigger: TGTGTGTCCTCCCTTTGTTCAGTGGACGGTTAAACC...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAACACCAGTACAGGCACTaGATGCGACAGAAGTTGGGG +
Preference number: 2 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKHQYRH*MRQKLG
Trigger: CCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTG...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
3UTR-3UTR GCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTCACCAGTACAGGCACTaGATGCGACAGAAGTTGGGG +
Preference number: 2 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGHQYRH*MRQKLG
Trigger: CCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTG...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGGCATGCGACAGAAGTTaGGGGAATGAAAGAGGAAAG +
Preference number: 2 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQACDRS*GNERGK
Trigger: CTTTCCTCTTTCATTCCCCCAACTTCTGTCGCATGC...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
3UTR-3UTR CCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTTATAGTCACCCACAGTaGCACTGGGGTGTGGGGAGT +
Preference number: 2 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGYSHPQ*HWGVGS
Trigger: ACTCCCCACACCCCAGTGCCACTGTGGGTGACTATA...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CAA 90 bp TCTATTTCCTCCTGTTGTCACTTGACTCATTTATGTCCACCCAACTaGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: SISSCCHLTHLCPPN*WDTQQTALEQPFLC
Trigger: ACAGAGGAACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTCAAGTGACAACAGGAGGAAATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTGGTTTAACCGTCCACTaGACAAAGGGAGGACACACA +
Preference number: 2 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPGLTVH*TKGGHT
Trigger: TGTGTGTCCTCCCTTTGTTCAGTGGACGGTTAAACC...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAACCTGTCCTTAGGGCATaGGGTTTAGTGTCTACACGG +
Preference number: 2 (lower is better)
Translates to: EERRQNVGCVCALLFYHQPVLRA*GLVSTR
Trigger: CCGTGTAGACACTAAACCTCATGCCCTAAGGACAGG...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGATTGGGCTGGTTGGCCTaGAATAGACTTCCGTGTTCC +
Preference number: 2 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRLGWLA*NRLPCS
Trigger: GGAACACGGAAGTCTATTCCAGGCCAACCAGCCCAA...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAATTGGGCTGGTTGGCCTaGAATAGACTTCCGTGTTCC +
Preference number: 2 (lower is better)
Translates to: EERRQNVGCVCALLFYHQLGWLA*NRLPCS
Trigger: GGAACACGGAAGTCTATTCCAGGCCAACCAGCCCAA...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGAGTTGGTTCTGCAGCTaGTGCAGCAGAGTAAGGACA +
Preference number: 2 (lower is better)
Translates to: QWEATICTAEVLSWFCHESWFCS*CSRVRT
Trigger: TGTCCTTACTCTGCTGCACCAGCTGCAGAACCAACT...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAATTGGCTTTGAGCAGTTaGTTCTGCAGCTGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: EERRQNVGCVCALLFYHQLALSS*FCSWCS
Trigger: GCTGCACCAGCTGCAGAACCAACTGCTCAAAGCCAA...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGCACAGTGTGGGCAAATaGGATGCTAATCTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMHSVGK*DANLPS
Trigger: ACTGGGGAGATTAGCATCCCATTTGCCCACACTGTG...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CAA 90 bp ACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTaGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGA +
Preference number: 2 (lower is better)
Translates to: THLCPPNLWDTQQTA*EQPFLCIIDGAMVR
Trigger: TCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTCAGATCGCAGCAGTGTaGAATAAAGGGGAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSQIAAV*NKGEVA
Trigger: TGCCACCTCCCCTTTATTTCACACTGCTGCGATCTG...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGACTGTTAAAGAAAACTaGAGAGAGAAGACAGAGCGG +
Preference number: 2 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQTVKEN*REKTER
Trigger: CCGCTCTGTCTTCTCTCTTCAGTTTTCTTTAACAGT...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
3UTR-3UTR GCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAAAGCTGGGACCCCTACTaGAATCTGCAATGCTCGTAT +
Preference number: 2 (lower is better)
Translates to: EERRQNVGCVCALLFYHQSWDPY*NLQCSY
Trigger: ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCT...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAATTGAGCAGTTGGTTCTaGAGCTGGTGCAGCAGAGTA +
Preference number: 2 (lower is better)
Translates to: EERRQNVGCVCALLFYHQLSSWF*SWCSRV
Trigger: TACTCTGCTGCACCAGCTGCAGAACCAACTGCTCAA...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTAGATCATTTCACCACTaGGGGAGCCCAGACACTGGC +
Preference number: 2 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTRSFHH*GSPDTG
Trigger: GCCAGTGTCTGGGCTCCCCCAGTGGTGAAATGATCT...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTCTAAGGCTGTGCAGATaGATGTGGCTCTCACTAGGT +
Preference number: 2 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGLRLCR*MWLSLG
Trigger: ACCTAGTGAGAGCCACATCCATCTGCACAGCCTTAG...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp TTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATATGCAGGGCGCTTTCTTaGCTCACTGCAACCTCTGCG +
Preference number: 2 (lower is better)
Translates to: FNNSMTYKGEGWGCLPLICRALS*LTATSA
Trigger: CGCAGAGGTTGCAGTGAGCCAAGAAAGCGCCCTGCA...TATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
3UTR-3UTR TCA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAAAGAAAAAGATTGGTTaGGTGGGGGAAGGTTTAACC +
Preference number: 2 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTKKKIG*VGEGLT
Trigger: GGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTT...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTTCCCTGGGAAGAGTATaGAAATGGGGAGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGSLGRV*KWGEER
Trigger: CCTTTCTTCTCCCCATTTTCATACTCTTCCCAGGGA...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTCACTGGCTGCATCTCTaGTCCTTTAAGTGCTCAATG +
Preference number: 2 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGHWLHL*SFKCSM
Trigger: CATTGAGCACTTAAAGGAGCAGAGATGCAGCCAGTG...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAAGCATGCGACAGAAGTTaGGGGAATGAAAGAGGAAAG +
Preference number: 2 (lower is better)
Translates to: EERRQNVGCVCALLFYHQACDRS*GNERGK
Trigger: CTTTCCTCTTTCATTCCCCCAACTTCTGTCGCATGC...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGAGCATGCGACAGAAGTTaGGGGAATGAAAGAGGAAAG +
Preference number: 2 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRACDRS*GNERGK
Trigger: CTTTCCTCTTTCATTCCCCCAACTTCTGTCGCATGC...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTGAAATAATTTTGGGCTaGTTGGCCTGGAATAGACTT +
Preference number: 2 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSREIILG*LAWNRL
Trigger: AAGTCTATTCCAGGCCAACCAGCCCAAAATTATTTC...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTCCCAGCAAACAGCCTTaGAACAGCCGTTCCTCTGTA +
Preference number: 2 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTPSKQP*NSRSSV
Trigger: TACAGAGGAACGGCTGTTCCAAGGCTGTTTGCTGGG...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTACCCCTACTGCAATCTaGAATGCTCGTATCATTGAA +
Preference number: 2 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPTPTAI*NARIIE
Trigger: TTCAATGATACGAGCATTGCAGATTGCAGTAGGGGT...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTCCTCCTCCGGTTAAGTaGATTCAAAACTTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTPPPVK*IQNFCP
Trigger: GGGGCAGAAGTTTTGAATGCACTTAACCGGAGGAGG...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTTTCAGTACCAAACACTaGCACCCAAATTGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSFSTKH*HPNCPA
Trigger: GGCTGGACAATTTGGGTGGCAGTGTTTGGTACTGAA...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTGTAGGGAGTGGGCTCTaGCAAGGCAGTGCTGGTGAC +
Preference number: 2 (lower is better)
Translates to: NRWECICLFENQFLLVLVVGSGL*QGSAGD
Trigger: GTCACCAGCACTGCCTTGGCAGAGCCCACTCCCTAC...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTGTGGGGGAAATCCCTTaGATAAGAAAGCTTGACACT +
Preference number: 2 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGVGEIP*IRKLDT
Trigger: AGTGTCAAGCTTTCTTATGCAAGGGATTTCCCCCAC...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTACTGTTAAAGAAAACTaGAGAGAGAAGACAGAGCGG +
Preference number: 2 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGTVKEN*REKTER
Trigger: CCGCTCTGTCTTCTCTCTTCAGTTTTCTTTAACAGT...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTCCTCCTGTTGTCACTTaGCTCATTTATGTCCACCCA +
Preference number: 2 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTPPVVT*LIYVHP
Trigger: TGGGTGGACATAAATGAGTCAAGTGACAACAGGAGG...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTCCCCAGAAACCCTTTTaGACGGATCATACACAAACG +
Preference number: 2 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTPQKPF*TDHTQT
Trigger: CGTTTGTGTATGATCCGTGCAAAAGGGTTTCTGGGG...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAATCTTCCCGTCTTCTATaGGTAAATTCCAGAGTGGTT +
Preference number: 2 (lower is better)
Translates to: EERRQNVGCVCALLFYHQSSRLL*VNSRVV
Trigger: AACCACTCTGGAATTTACCCATAGAAGACGGGAAGA...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTAGTGGCACTGGGGTGTaGGGAGTAGAGGCCAGAGTA +
Preference number: 2 (lower is better)
Translates to: NRWECICLFENQFLLVLVSGTGV*GVEARV
Trigger: TACTCTGGCCTCTACTCCCCACACCCCAGTGCCACT...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CAA 90 bp GAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTaGACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACA +
Preference number: 2 (lower is better)
Translates to: EKSFLSSKSISSCCH*THLCPPNLWDTQQT
Trigger: TGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTCAAGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAACAATGCTCGTATCATTaGACTGAATGTCATTTGTGT +
Preference number: 2 (lower is better)
Translates to: EERRQNVGCVCALLFYHQQCSYH*TECHLC
Trigger: ACACAAATGACATTCAGTTCAATGATACGAGCATTG...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR TCA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTCAATGCTCGTATCATTaGACTGAATGTCATTTGTGT +
Preference number: 2 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSQCSYH*TECHLC
Trigger: ACACAAATGACATTCAGTTCAATGATACGAGCATTG...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTACTTCAAAAACAGCCTaGTCCACTCCGTCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: NRWECICLFENQFLLVLVTSKTA*STPSSH
Trigger: GTGGGAAGACGGAGTGGACCAGGCTGTTTTTGAAGT...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR GCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTGTGGGGGAAATCCCTTaGATAAGAAAGCTTGACACT +
Preference number: 2 (lower is better)
Translates to: NRWECICLFENQFLLVLVVGEIP*IRKLDT
Trigger: AGTGTCAAGCTTTCTTATGCAAGGGATTTCCCCCAC...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTAGTTTCAATCCTCCCTaGCTCATAATTGAGCCCATC +
Preference number: 2 (lower is better)
Translates to: NRWECICLFENQFLLVLVSFNPP*LIIEPI
Trigger: GATGGGCTCAATTATGAGCCAGGGAGGATTGAAACT...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR GCA 72 bp AGGGAGGGTGGGCAGGTTAGGGTAGGGAGTGGGCTCTaGCAAGGCAGTGCTGGTGACCCGGAGGGACTACTC +
Preference number: 3 (lower is better)
Translates to: REGGQVRVGSGL*QGSAGDPEGLL
Trigger: GAGTAGTCCCTCCGGGTCACCAGCACTGCCTTGGCAGAGCCCACTCCCTACCCTAACCTGCCCACCCTCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp GCCTGGTCCACTCCGTCTTCCCACAGTGTGGGCAAATaGGATGCTAATCTCCCCAGTCCCCAGAACAGCAAC +
Preference number: 3 (lower is better)
Translates to: AWSTPSSHSVGK*DANLPSPQNSN
Trigger: GTTGCTGTTCTGGGGACTGGGGAGATTAGCATCCCATTTGCCCACACTGTGGGAAGACGGAGTGGACCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR TCA 72 bp CAGCTGGTGCAGCAGAGTAAGGACAGGACTCCAACCTaGTTGTGTACCCCCAGCCTCTCATCTCCTGGCACT +
Preference number: 3 (lower is better)
Translates to: QLVQQSKDRTPT*LCTPSLSSPGT
Trigger: AGTGCCAGGAGATGAGAGGCTGGGGGTACACAATCAGGTTGGAGTCCTGTCCTTACTCTGCTGCACCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR GCA 72 bp TTCATAATAATACTTGGTTTCGATGCCCCCGGGAACTaGCCCATTCCTCGGCTACCTCCCAGCCCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: FIIILGFDAPGN*PIPRLPPSPQH
Trigger: GTGCTGGGGGCTGGGAGGTAGCCGAGGAATGGGGCAGTTCCCGGGGGCATCGAAACCAAGTATTATTATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp GGGGCATTCAATTGTCAACCACCCTTAAGGGCTCTGTaGTTGGCTGTGAGATGGGGCTTGAGGCCTAGTCCC +
Preference number: 3 (lower is better)
Translates to: GAFNCQPPLRAL*LAVRWGLRPSP
Trigger: GGGACTAGGCCTCAAGCCCCATCTCACAGCCAACCACAGAGCCCTTAAGGGTGGTTGACAATTGAATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR TCA 72 bp GCTTCTGGAGCCAGAGAGGCAGGTGGGTGTACACTATaGGAAGAGCAGAAACCCGTACCTTTAAGGGGCTTC +
Preference number: 3 (lower is better)
Translates to: ASGAREAGGCTL*EEQKPVPLRGF
Trigger: GAAGCCCCTTAAAGGTACGGGTTTCTGCTCTTCTCATAGTGTACACCCACCTGCCTCTCTGGCTCCAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp CCTCACCTCGGTTCACGCAGCCTAAGGCTGTGCAGATaGATGTGGCTCTCACTAGGTGAAATTTCCTCAGGA +
Preference number: 3 (lower is better)
Translates to: PHLGSRSLRLCR*MWLSLGEISSG
Trigger: TCCTGAGGAAATTTCACCTAGTGAGAGCCACATCCATCTGCACAGCCTTAGGCTGCGTGAACCGAGGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp GCCCCTAACACTCCTAGTCATGTCCTACTTGGCAGCTaGGACCCCTACTGCAATCTGCAATGCTCGTATCAT +
Preference number: 3 (lower is better)
Translates to: APNTPSHVLLGS*DPYCNLQCSYH
Trigger: ATGATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACTAGGAGTGTTAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp GGCTGGTTGGCCTGGAATAGACTTCCGTGTTCCCAATaGGGTCAGGAGATCGGTCTTATTTCCCCAAGATAC +
Preference number: 3 (lower is better)
Translates to: GWLAWNRLPCSQ*GQEIGLISPRY
Trigger: GTATCTTGGGGAAATAAGACCGATCTCCTGACCCCATTGGGAACACGGAAGTCTATTCCAGGCCAACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp ACTCTATACATCTTACTTCCAAACCCCATTCTAAGGTaGCCTGGCTCCCAGGGAAAGGACTCAGCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: TLYILLPNPILR*PGSQGKDSAQG
Trigger: GCCCTGAGCTGAGTCCTTTCCCTGGGAGCCAGGCCACCTTAGAATGGGGTTTGGAAGTAAGATGTATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR GCA 72 bp TTTGCCATGAGCTGTTTGGCTTTGAGCAGTTGGTTCTaGAGCTGGTGCAGCAGAGTAAGGACAGGACTCCAA +
Preference number: 3 (lower is better)
Translates to: FAMSCLALSSWF*SWCSRVRTGLQ
Trigger: TTGGAGTCCTGTCCTTACTCTGCTGCACCAGCTGCAGAACCAACTGCTCAAAGCCAAACAGCTCATGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp ATGAGCTGTTTGGCTTTGAGCAGTTGGTTCTGCAGCTaGTGCAGCAGAGTAAGGACAGGACTCCAACCTGAT +
Preference number: 3 (lower is better)
Translates to: MSCLALSSWFCS*CSRVRTGLQPD
Trigger: ATCAGGTTGGAGTCCTGTCCTTACTCTGCTGCACCAGCTGCAGAACCAACTGCTCAAAGCCAAACAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp TGTTGTCACTTGACTCATTTATGTCCACCCAACTTGTaGGACACCCAGCAAACAGCCTTGGAACAGCCGTTC +
Preference number: 3 (lower is better)
Translates to: CCHLTHLCPPNL*DTQQTALEQPF
Trigger: GAACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTCAAGTGACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp TTCCAGATCATTTCACCACTGGGGGAGCCCAGACACTaGCTGCATCTCTGCTCCTTTAAGTGCTCAATGAAT +
Preference number: 3 (lower is better)
Translates to: FQIISPLGEPRH*LHLCSFKCSMN
Trigger: ATTCATTGAGCACTTAAAGGAGCAGAGATGCAGCCAGTGTCTGGGCTCCCCCAGTGGTGAAATGATCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CAA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTATGAGCTGTTTGGCTTaGAGCAGTTGGTTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGMSCLA*SSWFCS
Trigger: GCTGCAGAACCAACTGCTCAAAGCCAAACAGCTCAT...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CAA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTCCCAGCCAGACGGTATaGCACATTCTCTGTTCCTTA +
Preference number: 3 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGPSQTV*HILCSL
Trigger: TAAGGAACAGAGAATGTGCAATACCGTCTGGCTGGG...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CAA 90 bp GGGGTGTTTGCCTTTGATAAGATCATTAAGAGACACAATAATCAAATGCAGCGTGTGCAGGGCGCTTTCTaGGCTCACTGCAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: GVFAFDKIIKRHNNQMQRVQGAF*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAGAAAGCGCCCTGCAC...ACGCTGCATTTGATTATTGTGTCTCTTAATGATCTTATCAAAGGCAAACACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
3UTR-3UTR CAA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACACAAGATGAAATAATTTaGGGCTGGTTGGCCTGGAAT +
Preference number: 3 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTQDEII*GWLAWN
Trigger: ATTCCAGGCCAACCAGCCCAAAATTATTTCATCTTG...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CAA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTTTTGGCTTTGAGCAGTaGGTTCTGCAGCTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTFGFEQ*VLQLVQ
Trigger: CTGCACCAGCTGCAGAACCAACTGCTCAAAGCCAAA...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp TGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTaGTTTTGCCATGAGCTGTTTGGCTTTGAGCAGTTG +
Preference number: 3 (lower is better)
Translates to: WEATICTAEVLS*FCHELFGFEQL
Trigger: CAACTGCTCAAAGCCAAACAGCTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CAA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTACCCAGCAAACAGCCTaGGAACAGCCGTTCCTCTGT +
Preference number: 3 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTTQQTA*EQPFLC
Trigger: ACAGAGGAACGGCTGTTCCAAGGCTGTTTGCTGGGT...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR TCA 72 bp GGGAGAAGAAAGGGTAAGAAATCAAACCTCAGCGGTTaGACAAAGGGTCACCGAGCTATACTAGTCAAGAAG +
Preference number: 3 (lower is better)
Translates to: GRRKGKKSNLSG*TKGHRAILVKK
Trigger: CTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTGAGGTTTGATTTCTTACCCTTTCTTCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp AGAATACAAGATGAAATAATTTTGGGCTGGTTGGCCTaGAATAGACTTCCGTGTTCCCAATGGGGTCAGGAG +
Preference number: 3 (lower is better)
Translates to: RIQDEIILGWLA*NRLPCSQWGQE
Trigger: CTCCTGACCCCATTGGGAACACGGAAGTCTATTCCAGGCCAACCAGCCCAAAATTATTTCATCTTGTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR TCA 72 bp TTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTTaGCTCATTTATGTCCACCCAACTTGTGGGACACCC +
Preference number: 3 (lower is better)
Translates to: FFRLSLFPPVVT*LIYVHPTCGTP
Trigger: GGGTGTCCCACAAGTTGGGTGGACATAAATGAGTCAAGTGACAACAGGAGGAAATAGACTTAGACGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp AGATACAGAAAGGCAGGACCTAGTTTCAATCCTCCCTaGCTCATAATTGAGCCCATCTTCATACCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: RYRKAGPSFNPP*LIIEPIFIPLS
Trigger: AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGCCTTTCTGTATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR TCA 72 bp ATTGCACATTCTCTGTTCCTTACTTTTAATCTCAACTaGCAAACTTGGGCATCTCGTACCTCTGAGCACCTC +
Preference number: 3 (lower is better)
Translates to: IAHSLFLTFNLN*QTWASRTSEHL
Trigger: GAGGTGCTCAGAGGTACGAGATGCCCAAGTTTGTCAGTTGAGATTAAAAGTAAGGAACAGAGAATGTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CAA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTTTATGTCCACCCAACTaGTGGGACACCCAGCAAACA +
Preference number: 3 (lower is better)
Translates to: NRWECICLFENQFLLVLVLCPPN*WDTQQT
Trigger: TGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAA...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CAA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTGTCTATTTCCTCCTGTaGTCACTTGACTCATTTATG +
Preference number: 3 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTVYFLL*SLDSFM
Trigger: CATAAATGAGTCAAGTGACAACAGGAGGAAATAGAC...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR-3UTR CAA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTATGAGCTGTTTGGCTTaGAGCAGTTGGTTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: NRWECICLFENQFLLVLVMSCLA*SSWFCS
Trigger: GCTGCAGAACCAACTGCTCAAAGCCAAACAGCTCAT...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CCA 72 bp CTCTTCAACAATTCAATGACATATAAGGGTGAGGGTTaGGGGTGTTTGCCTTTGATAAGATCATTAAGAGAC +
Preference number: 3 (lower is better)
Translates to: LFNNSMTYKGEG*GCLPLIRSLRD
Trigger: GTCTCTTAATGATCTTATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR TCA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGGCTTCCAGTGAGGGGTaGAATCTGTGCGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGASSEG*NLCGTG
Trigger: CCCAGTGCCGCACAGATTTCACCCCTCACTGGAAGC...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGATTAGGCGGGCCCCGCTaGCCCTGTAGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERLGGPR*PCSWAG
Trigger: CCCAGCCCAGCTACAGGGTCAGCGGGGCCCGCCTAA...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGAGCTTAGATAGGCCCTaGTGTCCCACATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGSLDRP*CPTWAG
Trigger: TCCTGCCCATGTGGGACAGCAGGGCCTATCTAAGCT...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGCTGCCAGTCTCAGTGTaGTGGGCCCGGCCCACTCCC +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQLPVSV*WARPTP
Trigger: GGGAGTGGGCCGGGCCCAGCACACTGAGACTGGCAG...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAACGCTGGAGGCTGCTCTaGGGCTGTGGAGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNERWRLL*GCGACR
Trigger: TCGGCAGGCTCCACAGCCCCAGAGCAGCCTCCAGCG...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGTGCAATGTTGACACCTaGCATACCAAGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGCNVDT*HTKEAT
Trigger: GGTGGCCTCCTTGGTATGCCAGGTGTCAACATTGCA...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTTAGGCGGGCCCCGCTaGCCCTGTAGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQALGGPR*PCSWAG
Trigger: CCCAGCCCAGCTACAGGGTCAGCGGGGCCCGCCTAA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGCCTCCTCCGGTTAAGTaGATTCAAAACTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGPPPVK*IQNFCP
Trigger: GGGGCAGAAGTTTTGAATGCACTTAACCGGAGGAGG...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGACCAAGGAGGCCACCTaGCACAGACAACTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGTKEAT*HRQLGC
Trigger: GCACCCCAGTTGTCTGTGCCAGGTGGCCTCCTTGGT...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGAGTTGGTTCTGCAGCTaGTGCAGCAGAGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGSWFCS*CSRVRT
Trigger: TGTCCTTACTCTGCTGCACCAGCTGCAGAACCAACT...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTCCAGTCTCAGTGTGCTaGGCCCGGCCCACTCCCCTA +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRPVSVC*ARPTPL
Trigger: TAGGGGAGTGGGCCGGGCCCAGCACACTGAGACTGG...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTTTAGGCGGGCCCCGCTaGCCCTGTAGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGLGGPR*PCSWAG
Trigger: CCCAGCCCAGCTACAGGGTCAGCGGGGCCCGCCTAA...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTTAGGCGGGCCCCGCTaGCCCTGTAGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHLGGPR*PCSWAG
Trigger: CCCAGCCCAGCTACAGGGTCAGCGGGGCCCGCCTAA...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATCCAAGGCAGTGCTGGTaGCCCGGAGGGACTACTCCA +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYPRQCW*PGGTTP
Trigger: TGGAGTAGTCCCTCCGGGTCACCAGCACTGCCTTGG...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACATGCCACGCTGGAGGCTaGTCTGGGGCTGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTCHAGG*SGAVEP
Trigger: AGGCTCCACAGCCCCAGAGCAGCCTCCAGCGTGGCA...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGCCACGCTGGAGGCTaGTCTGGGGCTGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSCHAGG*SGAVEP
Trigger: AGGCTCCACAGCCCCAGAGCAGCCTCCAGCGTGGCA...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGCACCCACAGGTAGGGTaGTATTCGTCCTTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGHPQVG*YSSFFD
Trigger: ATCAAAGAAGGACGAATAGCACCCTACCTGTGGGTG...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGCACTGGCTGCATCTCTaGTCCTTTAAGTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGHWLHL*SFKCSM
Trigger: CATTGAGCACTTAAAGGAGCAGAGATGCAGCCAGTG...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTGATGCCCCCGGGAACTaGCCCATTCCTCGGCTACCT +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRDAPGN*PIPRLP
Trigger: AGGTAGCCGAGGAATGGGGCAGTTCCCGGGGGCATC...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGAGCTGCTCTGGGGCTGTaGAGCCTGCCGAAGCGTATG +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERAALGL*SLPKRM
Trigger: CATACGCTTCGGCAGGCTCCACAGCCCCAGAGCAGC...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGGCTGCTCTGGGGCTGTaGAGCCTGCCGAAGCGTATG +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWAALGL*SLPKRM
Trigger: CATACGCTTCGGCAGGCTCCACAGCCCCAGAGCAGC...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGCGCTGGAGGCTGCTCTaGGGCTGTGGAGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQARWRLL*GCGACR
Trigger: TCGGCAGGCTCCACAGCCCCAGAGCAGCCTCCAGCG...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATTGGAGCGGGCAGATGTaGGTATGCCACGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYWSGQM*VCHAGG
Trigger: GCCTCCAGCGTGGCATACCCACATCTGCCCGCTCCA...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACACCCACAGTGGCACTaGGGTGTGGGGAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERHPQWH*GVGSRG
Trigger: GCCTCTACTCCCCACACCCCAGTGCCACTGTGGGTG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CAA 72 bp GCATTCAATTGTCAACCACCCTTAAGGGCTCTGTGGTaGGCTGTGAGATGGGGCTTGAGGCCTAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: AFNCQPPLRALW*AVRWGLRPSPR
Trigger: GCGGGGACTAGGCCTCAAGCCCCATCTCACAGCCAACCACAGAGCCCTTAAGGGTGGTTGACAATTGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGGAGGATGTTGTACGCTaGCATGGAACAGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGEDVVR*HGTEEL
Trigger: AAGTTCTTCTGTTCCATGTCAGCGTACAACATCCTC...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGGCTTCCAGTGAGGGGTaGAATCTGTGCGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWASSEG*NLCGTG
Trigger: CCCAGTGCCGCACAGATTTCACCCCTCACTGGAAGC...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGCCACCATCTCCCCTGTaGCCTCAGCACCTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQPPSPL*PQHLSR
Trigger: CCTGCTTAGGTGCTGAGGTCACAGGGGAGATGGTGG...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTCCAAGGCAGTGCTGGTaGCCCGGAGGGACTACTCCA +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSPRQCW*PGGTTP
Trigger: TGGAGTAGTCCCTCCGGGTCACCAGCACTGCCTTGG...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAGCTTAGATAGGCCCTaGTGTCCCACATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGSLDRP*CPTWAG
Trigger: TCCTGCCCATGTGGGACAGCAGGGCCTATCTAAGCT...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTGGGCAGATGTGGGTATaGCACGCTGGAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRGQMWV*HAGGCS
Trigger: AGAGCAGCCTCCAGCGTGGCATACCCACATCTGCCC...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAGACACTGGACACAGCTaGAGCCGTAGTGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEDTGHS*SRSGGE
Trigger: CTCTCCCCCACTACGGCTCCAGCTGTGTCCAGTGTC...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGAGCGGGCAGATGTaGGTATGCCACGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSWSGQM*VCHAGG
Trigger: GCCTCCAGCGTGGCATACCCACATCTGCCCGCTCCA...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGACCAAGGAGGCCACCTaGCACAGACAACTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWTKEAT*HRQLGC
Trigger: GCACCCCAGTTGTCTGTGCCAGGTGGCCTCCTTGGT...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGGAAATAAAGGGGAGGTaGCAGGGCAGGGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGEIKGR*QGRACV
Trigger: AACACACGCCCTGCCCTGCCACCTCCCCTTTATTTC...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGGTCCTACTTGGCAGCTaGGACCCCTACTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGVLLGS*DPYCNL
Trigger: CAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGAC...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAGATCATTTCACCACTaGGGGAGCCCAGACACTGGC +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGRSFHH*GSPDTG
Trigger: GCCAGTGTCTGGGCTCCCCCAGTGGTGAAATGATCT...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACCAGTCTCAGTGTGCTaGGCCCGGCCCACTCCCCTA +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRPVSVC*ARPTPL
Trigger: TAGGGGAGTGGGCCGGGCCCAGCACACTGAGACTGG...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGTACCGGGCGCGCGAATaGCACCTGAACCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQYRARE*HLNLCT
Trigger: AGTGCAGAGGTTCAGGTGCCATTCGCGCGCCCGGTA...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634544.1
CDS-3UTR TCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGGTCCTGTTGTCTCCATaGGGCCTGAGATTCCCGTTA +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGVLLSP*GLRFPL
Trigger: TAACGGGAATCTCAGGCCTCATGGAGACAACAGGAC...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTGGCATCTCGTACCTCTaGGCACCTCTGAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSGISYL*APLSLG
Trigger: CCCCAAGCTCAGAGGTGCTCAGAGGTACGAGATGCC...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGCCTGTCCTTAGGGCATaGGGTTTAGTGTCTACACGG +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGPVLRA*GLVSTR
Trigger: CCGTGTAGACACTAAACCTCATGCCCTAAGGACAGG...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACTGATGCCCTGGACATaGCTCTGCTGCCTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERLMPWT*LCCLSQ
Trigger: TTGGGAGAGGCAGCAGAGTCATGTCCAGGGCATCAG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAGGGGAGAGGGCTGCCTaGTGCTGTAATCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEGERAA*CCNRCS
Trigger: TGAACAGCGATTACAGCAGCAGGCAGCCCTCTCCCC...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATGGGGAGAGGGCTGCCTaGTGCTGTAATCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYGERAA*CCNRCS
Trigger: TGAACAGCGATTACAGCAGCAGGCAGCCCTCTCCCC...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGTATCCATCCTGGCGGTaGCGGTGTAACTCCCGGCTA +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQYPSWR*RCNSRL
Trigger: TAGCCGGGAGTTACACCGCCACCGCCAGGATGGATA...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368655.5
CDS-3UTR CCA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGTGCATTCTGTACAACTaGAGTCTTCTGGACCACATT +
Preference number: 4 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGCILYN*SLLDHI
Trigger: AATGTGGTCCAGAAGACTCCAGTTGTACAGAATGCA...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGGCTGGGGCTAGGAAGTaGCGAGGACACTCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQAGARK*RGHSVH
Trigger: GTGAACAGAGTGTCCTCGCCACTTCCTAGCCCCAGC...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAGCTGCTCTGGGGCTGTaGAGCCTGCCGAAGCGTATG +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRAALGL*SLPKRM
Trigger: CATACGCTTCGGCAGGCTCCACAGCCCCAGAGCAGC...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTCGCTGGAGGCTGCTCTaGGGCTGTGGAGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSRWRLL*GCGACR
Trigger: TCGGCAGGCTCCACAGCCCCAGAGCAGCCTCCAGCG...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTGGAGCGGGCAGATGTaGGTATGCCACGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAWSGQM*VCHAGG
Trigger: GCCTCCAGCGTGGCATACCCACATCTGCCCGCTCCA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATGTCGGTCTGCCAAACTaGGGCCTTTGTGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYVGLPN*GLCVLR
Trigger: TCGGAGGACACAAAGGCCCCAGTTTGGCAGACCGAC...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGCCCAGCAAACAGCCTTaGAACAGCCGTTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGPSKQP*NSRSSV
Trigger: TACAGAGGAACGGCTGTTCCAAGGCTGTTTGCTGGG...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATAGTGGCACTGGGGTGTaGGGAGTAGAGGCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYSGTGV*GVEARV
Trigger: TACTCTGGCCTCTACTCCCCACACCCCAGTGCCACT...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGCACCCACAGTGGCACTaGGGTGTGGGGAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVHPQWH*GVGSRG
Trigger: GCCTCTACTCCCCACACCCCAGTGCCACTGTGGGTG...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTGGGGAGCCCAGACACTaGCTGCATCTCTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRGEPRH*LHLCSF
Trigger: AAAGGAGCAGAGATGCAGCCAGTGTCTGGGCTCCCC...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGAGGGGAGCCCAGACACTaGCTGCATCTCTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERGEPRH*LHLCSF
Trigger: AAAGGAGCAGAGATGCAGCCAGTGTCTGGGCTCCCC...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGGAAGCCAGGCAGAACTaGTGGGATCCTCACTCTACT +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGEARQN*WDPHST
Trigger: AGTAGAGTGAGGATCCCACCAGTTCTGCCTGGCTTC...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGCCCTTAAGGGCTCTGTaGTTGGCTGTGAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWPLRAL*LAVRWG
Trigger: GCCCCATCTCACAGCCAACCACAGAGCCCTTAAGGG...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGCTTCCAGTGAGGGGTaGAATCTGTGCGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAASSEG*NLCGTG
Trigger: CCCAGTGCCGCACAGATTTCACCCCTCACTGGAAGC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAGCTTCCAGTGAGGGGTaGAATCTGTGCGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRASSEG*NLCGTG
Trigger: CCCAGTGCCGCACAGATTTCACCCCTCACTGGAAGC...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGTGGTCTCTTGTTTACTaGCACTGGACACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGWSLVY*HWTQLE
Trigger: CTCCAGCTGTGTCCAGTGTCAGTAAACAAGAGACCA...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGGGTTTAACCGTCCACTaGACAAAGGGAGGACACACA +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGGLTVH*TKGGHT
Trigger: TGTGTGTCCTCCCTTTGTTCAGTGGACGGTTAAACC...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACACTGATGCCCTGGACATaGCTCTGCTGCCTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTLMPWT*LCCLSQ
Trigger: TTGGGAGAGGCAGCAGAGTCATGTCCAGGGCATCAG...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTACCTCTGCACTCGCATaGGTGGCTCGCTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSTSALA*VARSSM
Trigger: CATTGAGGAGCGAGCCACTCATGCGAGTGCAGAGGT...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634544.1
CDS-3UTR GCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGCGTTCCATGGCCTCATaGCCCTCCATTTTGAGTCGC +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWRSMAS*PSILSR
Trigger: GCGACTCAAAATGGAGGGGCATGAGGCCATGGAACG...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGCGTTCCATGGCCTCATaGCCCTCCATTTTGAGTCGC +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQRSMAS*PSILSR
Trigger: GCGACTCAAAATGGAGGGGCATGAGGCCATGGAACG...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGTGCTTGATAAGCTGCTaGCGCTCCTCAATGCCTTTC +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGCLISC*RSSMPF
Trigger: GAAAGGCATTGAGGAGCGGCAGCAGCTTATCAAGCA...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGAGCTTAGATAGGCCCTaGTGTCCCACATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWSLDRP*CPTWAG
Trigger: TCCTGCCCATGTGGGACAGCAGGGCCTATCTAAGCT...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTGCCACGCTGGAGGCTaGTCTGGGGCTGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQCHAGG*SGAVEP
Trigger: AGGCTCCACAGCCCCAGAGCAGCCTCCAGCGTGGCA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGGGCAGATGTGGGTATaGCACGCTGGAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAGQMWV*HAGGCS
Trigger: AGAGCAGCCTCCAGCGTGGCATACCCACATCTGCCC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGGGGCAGATGTGGGTATaGCACGCTGGAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVGQMWV*HAGGCS
Trigger: AGAGCAGCCTCCAGCGTGGCATACCCACATCTGCCC...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAATTCACGCTGTCGGTCTaGCAAACTGGGGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEFTLSV*QTGAFV
Trigger: CACAAAGGCCCCAGTTTGGCAGACCGACAGCGTGAA...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACACCAGTACAGGCACTaGATGCGACAGAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERHQYRH*MRQKLG
Trigger: CCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTCACCAGTACAGGCACTaGATGCGACAGAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRHQYRH*MRQKLG
Trigger: CCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTG...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGAGATGCCCCCGGGAACTaGCCCATTCCTCGGCTACCT +
Preference number: 4 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRDAPGN*PIPRLP
Trigger: AGGTAGCCGAGGAATGGGGCAGTTCCCGGGGGCATC...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGACACTGGACACAGCTaGAGCCGTAGTGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQADTGHS*SRSGGE
Trigger: CTCTCCCCCACTACGGCTCCAGCTGTGTCCAGTGTC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp CCCAGTCTCTTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGGCTGCTCTGGGGCTGTaGAGCCTGCCGAAGCGTATG +
Preference number: 4 (lower is better)
Translates to: PSLFNNSMTYKGEGWGCLAALGL*SLPKRM
Trigger: CATACGCTTCGGCAGGCTCCACAGCCCCAGAGCAGC...CAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAAGAGACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGGAGCGGGCAGATGTaGGTATGCCACGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHWSGQM*VCHAGG
Trigger: GCCTCCAGCGTGGCATACCCACATCTGCCCGCTCCA...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGGAAATAAAGGGGAGGTaGCAGGGCAGGGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWEIKGR*QGRACV
Trigger: AACACACGCCCTGCCCTGCCACCTCCCCTTTATTTC...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGTGTCCACCCAACTTGTaGGACACCCAGCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWCPPNL*DTQQTA
Trigger: GGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACA...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTTGTCCACCCAACTTGTaGGACACCCAGCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRCPPNL*DTQQTA
Trigger: GGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACA...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAAGTGGCACTGGGGTGTaGGGAGTAGAGGCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTSGTGV*GVEARV
Trigger: TACTCTGGCCTCTACTCCCCACACCCCAGTGCCACT...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGGCCAGGCAGAACTGGTaGGATCCTCACTCTACTAAT +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGARQNW*DPHSTN
Trigger: ATTAGTAGAGTGAGGATCCCACCAGTTCTGCCTGGC...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATGGGACTACTCCAGGGTaGGGAGGCAAGGCACAAATT +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYGTTPG*GGKAQI
Trigger: AATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCC...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CAA 72 bp TGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTaGGAACAGCCGTTCCTCTGTATTATAGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: CPPNLWDTQQTA*EQPFLCIIDGA
Trigger: AGCCCCATCTATAATACAGAGGAACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATTTTGGCTGCAGCCTGTaGGTTGGCAGCATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYFGCSL*VGSISH
Trigger: ATGACTGATGCTGCCAACTCACAGGCTGCAGCCAAA...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAATTTGGCTGCAGCCTGTaGGTTGGCAGCATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEFGCSL*VGSISH
Trigger: ATGACTGATGCTGCCAACTCACAGGCTGCAGCCAAA...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGTTCAACCCGCAGAAGTaGGGCACAGCTTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQFNPQK*GTAFAL
Trigger: CAAGGCAAAAGCTGTGCCTCACTTCTGCGGGTTGAA...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTTGCCTGTGCAAAGTTTaGAAGCATGGAGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRCLCKV*KHGAGR
Trigger: TCTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCA...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGATGCCTGTGCAAAGTTTaGAAGCATGGAGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERCLCKV*KHGAGR
Trigger: TCTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCA...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACAGATCGCAGCAGTGTaGAATAAAGGGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERQIAAV*NKGEVA
Trigger: TGCCACCTCCCCTTTATTTCACACTGCTGCGATCTG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAGACAGGACTCCAACCTaGTTGTGTACCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRDRTPT*LCTPSL
Trigger: GAGGCTGGGGGTACACAATCAGGTTGGAGTCCTGTC...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTTCAAACCTCAGCGGTTaGACAAAGGGTCACCGAGCT +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRSNLSG*TKGHRA
Trigger: AGCTCGGTGACCCTTTGTTCAACCGCTGAGGTTTGA...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CCCAGTCTCTTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCCTGTTGCCCAGGCTaGCCTCAAGTGATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PSLFNNSMTYKGEGWGCLPCCPG*PQVIRC
Trigger: GCACCTGATCACTTGAGGTCAGCCTGGGCAACAGGG...CAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAAGAGACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR GCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAATCATCTCGCTCATCTaGTGGGTCCAAGCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEIISLI*WVQAPL
Trigger: AAGCGGAGCTTGGACCCAGCAGATGAGCGAGATGAT...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGCTGCTTGATAAGCTaGTGCCGCTCCTCAATGCCT +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNESCLIS*CRSSMP
Trigger: AGGCATTGAGGAGCGGCAGCAGCTTATCAAGCAGCT...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTGTAGGGAGTGGGCTCTaGCAAGGCAGTGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGVGSGL*QGSAGD
Trigger: GTCACCAGCACTGCCTTGGCAGAGCCCACTCCCTAC...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTCGCAGCCTAAGGCTGTaGAGATGGATGTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSRSLRL*RWMWLS
Trigger: TGAGAGCCACATCCATCTGCACAGCCTTAGGCTGCG...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGATGGCACCTGAACCTCTaGACTCGCATGAGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRWHLNL*TRMSGS
Trigger: CGAGCCACTCATGCGAGTGCAGAGGTTCAGGTGCCA...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634544.1
CDS-3UTR CCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTTCATGTTGGGTGTTGTaGTGCGTACAAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRSCWVL*CVQGQA
Trigger: AGCCTGGCCTTGTACGCACCACAACACCCAACATGA...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAATCATGTTGGGTGTTGTaGTGCGTACAAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNESCWVL*CVQGQA
Trigger: AGCCTGGCCTTGTACGCACCACAACACCCAACATGA...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGCTGGGGCTAGGAAGTaGCGAGGACACTCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAAGARK*RGHSVH
Trigger: GTGAACAGAGTGTCCTCGCCACTTCCTAGCCCCAGC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACTGCAGCCTGTGAGTTaGCAGCATCAGTCATGGCGC +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRLQPVS*QHQSWR
Trigger: GCGCCATGACTGATGCTGCCAACTCACAGGCTGCAG...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGCTGCAGCCTGTGAGTTaGCAGCATCAGTCATGGCGC +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQALQPVS*QHQSWR
Trigger: GCGCCATGACTGATGCTGCCAACTCACAGGCTGCAG...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGATGCGAAGAGCCAATTTaGCTGCAGCCTGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERCEEPI*LQPVSW
Trigger: CCAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCA...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATTGCGAAGAGCCAATTTaGCTGCAGCCTGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYCEEPI*LQPVSW
Trigger: CCAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCA...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGAAGGAGGTTTAGGGGGTaGGATCTCCAGGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERRRFRG*DLQECL
Trigger: AAGACACTCCTGGAGATCCCACCCCCTAAACCTCCT...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAAATCTGTGCGGCACTaGGCACATACAAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGKSVRH*AHTKGS
Trigger: TGAACCCTTTGTATGTGCCCAGTGCCGCACAGATTT...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAAGACACTGGACACAGCTaGAGCCGTAGTGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: EERRQNVGCVCALLFYHQDTGHS*SRSGGE
Trigger: CTCTCCCCCACTACGGCTCCAGCTGTGTCCAGTGTC...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCTGCTCTGGGGCTGTaGAGCCTGCCGAAGCGTATG +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQAALGL*SLPKRM
Trigger: CATACGCTTCGGCAGGCTCCACAGCCCCAGAGCAGC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATAAGATCACGCTGGAGGCTGCTCTaGGGCTGTGGAGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: NSMTYKGEGWGCLPLIRSRWRLL*GCGACR
Trigger: TCGGCAGGCTCCACAGCCCCAGAGCAGCCTCCAGCG...TGATCTTATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGGTCGGTCTGCCAAACTaGGGCCTTTGTGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVVGLPN*GLCVLR
Trigger: TCGGAGGACACAAAGGCCCCAGTTTGGCAGACCGAC...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGGCATGCGACAGAAGTTaGGGGAATGAAAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGACDRS*GNERGK
Trigger: CTTTCCTCTTTCATTCCCCCAACTTCTGTCGCATGC...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATCTTCCGTGTTCCCAATaGGGTCAGGAGATCGGTCTT +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYLPCSQ*GQEIGL
Trigger: AAGACCGATCTCCTGACCCCATTGGGAACACGGAAG...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAACTTCCGTGTTCCCAATaGGGTCAGGAGATCGGTCTT +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNELPCSQ*GQEIGL
Trigger: AAGACCGATCTCCTGACCCCATTGGGAACACGGAAG...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGCCCAGCAAACAGCCTTaGAACAGCCGTTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWPSKQP*NSRSSV
Trigger: TACAGAGGAACGGCTGTTCCAAGGCTGTTTGCTGGG...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTGGGACTACTCCAGGGTaGGGAGGCAAGGCACAAATT +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSGTTPG*GGKAQI
Trigger: AATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCC...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATCCCTTAAGGGCTCTGTaGTTGGCTGTGAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDPLRAL*LAVRWG
Trigger: GCCCCATCTCACAGCCAACCACAGAGCCCTTAAGGG...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGACTCAGCCCAGGCTGTaGGGAAATTGGGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVTQPRL*GNWAPE
Trigger: TTCAGGGGCCCAATTTCCCCACAGCCTGGGCTGAGT...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACACATGCCCCTCCATTTTaGGTCGCTTTGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTHAPPF*VALPGH
Trigger: ATGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATG...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGCCTACCATGTAGATaGACTCGCTATTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNESLPCR*TRYWLH
Trigger: GTGCAGCCAATAGCGAGTTCATCTACATGGTAGGCT...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACATTCAACCCGCAGAAGTaGGGCACAGCTTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTFNPQK*GTAFAL
Trigger: CAAGGCAAAAGCTGTGCCTCACTTCTGCGGGTTGAA...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATTTTTCTTGCTTCCAGTaGGGGGTGAAATCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYFSCFQ*GVKSVR
Trigger: CCGCACAGATTTCACCCCTCACTGGAAGCAAGAAAA...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTGGCATCTCGTACCTCTaGGCACCTCTGAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSGISYL*APLSLG
Trigger: CCCCAAGCTCAGAGGTGCTCAGAGGTACGAGATGCC...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGGTTAACACTTTACCATaGTTAGGGAGACCTCACCTC +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGVNTLP*LGRPHL
Trigger: GAGGTGAGGTCTCCCTAATCATGGTAAAGTGTTAAC...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAAGATGTCACTGGTCTaGTGCCCTGGACATGACTCT +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEKMSLV*CPGHDS
Trigger: AGAGTCATGTCCAGGGCATCAGACCAGTGACATCTT...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGCCGACCCTCAGGAACTaGACTGGAAGACAGATCCAG +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVPTLRN*TGRQIQ
Trigger: CTGGATCTGTCTTCCAGTTCAGTTCCTGAGGGTCGG...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634544.1
CDS-3UTR TCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGGCTCCTCAATGTAATTaGGAGCAGGGAGGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQAPQCN*EQGGQK
Trigger: CTTTTGGCCTCCCTGCTCTCAATTACATTGAGGAGC...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634544.1
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGCGTTCCATGGCCTCATaGCCCTCCATTTTGAGTCGC +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQARSMAS*PSILSR
Trigger: GCGACTCAAAATGGAGGGGCATGAGGCCATGGAACG...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGGAGAGGGCTGCCTGCTaGTGTAATCGCTGTTCAATT +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWERAAC*CNRCSI
Trigger: AATTGAACAGCGATTACAGCAGCAGGCAGCCCTCTC...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp TTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATATGCCACGCTGGAGGCTaGTCTGGGGCTGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: FNNSMTYKGEGWGCLPLICHAGG*SGAVEP
Trigger: AGGCTCCACAGCCCCAGAGCAGCCTCCAGCGTGGCA...TATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR GCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGTTCACGCTGTCGGTCTaGCAAACTGGGGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVFTLSV*QTGAFV
Trigger: CACAAAGGCCCCAGTTTGGCAGACCGACAGCGTGAA...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGTGTCCACTGATGGACTaGGATATAGACCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMCPLMD*DIDRGG
Trigger: CCCTCCCCGGTCTATATCGCAGTCCATCAGTGGACA...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGCACCAGTACAGGCACTaGATGCGACAGAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAHQYRH*MRQKLG
Trigger: CCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTG...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTCTGCCAGTCTCAGTGTaGTGGGCCCGGCCCACTCCC +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTLPVSV*WARPTP
Trigger: GGGAGTGGGCCGGGCCCAGCACACTGAGACTGGCAG...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGTAGGGAGTGGGCTCTaGCAAGGCAGTGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQVGSGL*QGSAGD
Trigger: GTCACCAGCACTGCCTTGGCAGAGCCCACTCCCTAC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGCGCAGCCTAAGGCTGTaGAGATGGATGTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHERSLRL*RWMWLS
Trigger: TGAGAGCCACATCCATCTGCACAGCCTTAGGCTGCG...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATTGCCATCCTGTTTGGTaGGTAACTCATGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYCHPVW*VTHVAP
Trigger: AGGTGCCACATGAGTTACCCACCAAACAGGATGGCA...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAACACTGCCATCCTGTTTaGTGGGTAACTCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEHCHPV*WVTHVA
Trigger: TGCCACATGAGTTACCCACCAAACAGGATGGCAGTG...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGCACTGCCATCCTGTTTaGTGGGTAACTCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQHCHPV*WVTHVA
Trigger: TGCCACATGAGTTACCCACCAAACAGGATGGCAGTG...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATAACTGGAACGGGGACTaGAAGCCTCATTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYNWNGD*KPHCQT
Trigger: TGTCTGACAATGAGGCTTCCAGTCCCCGTTCCAGTT...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGGTCTTTCTTCCATTCTaGAACTGGAACGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQVFLPF*NWNGDW
Trigger: CCAGTCCCCGTTCCAGTTCCAGAATGGAAGAAAGAC...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGTCTGTTCACCGTCCCTaGCTGGATATGAGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQSVHRP*LDMRSK
Trigger: CTTGCTTCTCATATCCAGCCAGGGACGGTGAACAGA...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAACTGCAGCCTGTGAGTTaGCAGCATCAGTCATGGCGC +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKLQPVS*QHQSWR
Trigger: GCGCCATGACTGATGCTGCCAACTCACAGGCTGCAG...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTCGCTGGAGGCTGCTCTaGGGCTGTGGAGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTRWRLL*GCGACR
Trigger: TCGGCAGGCTCCACAGCCCCAGAGCAGCCTCCAGCG...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGACCAAGGAGGCCACCTaGCACAGACAACTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQTKEAT*HRQLGC
Trigger: GCACCCCAGTTGTCTGTGCCAGGTGGCCTCCTTGGT...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGCAATGTTGACACCTaGCATACCAAGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSCNVDT*HTKEAT
Trigger: GGTGGCCTCCTTGGTATGCCAGGTGTCAACATTGCA...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGAAATAAAGGGGAGGTaGCAGGGCAGGGCGTGTGTT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAEIKGR*QGRACV
Trigger: AACACACGCCCTGCCCTGCCACCTCCCCTTTATTTC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTTGGCTTTGAGCAGTTaGTTCTGCAGCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSLALSS*FCSWCS
Trigger: GCTGCACCAGCTGCAGAACCAACTGCTCAAAGCCAA...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACACAGTGTGGGCAAATaGGATGCTAATCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERHSVGK*DANLPS
Trigger: ACTGGGGAGATTAGCATCCCATTTGCCCACACTGTG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTCACAGTGTGGGCAAATaGGATGCTAATCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRHSVGK*DANLPS
Trigger: ACTGGGGAGATTAGCATCCCATTTGCCCACACTGTG...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGTATAGTCACCCACAGTaGCACTGGGGTGTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHEYSHPQ*HWGVGS
Trigger: ACTCCCCACACCCCAGTGCCACTGTGGGTGACTATA...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTAACCCCATTCTAAGGTaGCCTGGCTCCCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPNPILR*PGSQGK
Trigger: CTTTCCCTGGGAGCCAGGCCACCTTAGAATGGGGTT...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGAAAAGGAGACAAAATGTaGGCTGTGTCTGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERKGDKM*AVSALS
Trigger: GGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTT...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATAGAGGCCGGGCATCCTTaGCTGTGGCCCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FNNSMTYKGEGWGCLPLIEAGHP*LWPLPP
Trigger: AGGAGGAAGGGGCCACAGCCAAGGATGCCCGGCCTC...TATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGCTGCACTCGCATGAGTaGCTCGCTCCTCAATGTAAT +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQLHSHE*LAPQCN
Trigger: ATTACATTGAGGAGCGAGCCACTCATGCGAGTGCAG...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634544.1
3UTR CAA 72 bp TCCTGTTGTCACTTGACTCATTTATGTCCACCCAACTaGTGGGACACCCAGCAAACAGCCTTGGAACAGCCG +
Preference number: 4 (lower is better)
Translates to: SCCHLTHLCPPN*WDTQQTALEQP
Trigger: CGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTCAAGTGACAACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGCATGCCCCTCCATTTTaGGTCGCTTTGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAHAPPF*VALPGH
Trigger: ATGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATG...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGCATGCCCCTCCATTTTaGGTCGCTTTGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVHAPPF*VALPGH
Trigger: ATGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATG...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGGTCCTGTTGTCTCCATaGGGCCTGAGATTCCCGTTA +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHEVLLSP*GLRFPL
Trigger: TAACGGGAATCTCAGGCCTCATGGAGACAACAGGAC...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGGGTGGTATTGGTAGCTaGACGGATGACACTGTGACC +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHEGGIGS*TDDTVT
Trigger: GGTCACAGTGTCATCCGTTCAGCTACCAATACCACC...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGGTGGTATTGGTAGCTaGACGGATGACACTGTGACC +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAGGIGS*TDDTVT
Trigger: GGTCACAGTGTCATCCGTTCAGCTACCAATACCACC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTAGCCTACCATGTAGATaGACTCGCTATTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSSLPCR*TRYWLH
Trigger: GTGCAGCCAATAGCGAGTTCATCTACATGGTAGGCT...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGCCTGCCGAAGCGTATaGTGTCTCATGATGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAACRSV*CLMMVS
Trigger: AGAGACCATCATGAGACATCATACGCTTCGGCAGGC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGTGCCTGTGCAAAGTTTaGAAGCATGGAGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMCLCKV*KHGAGR
Trigger: TCTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCA...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTGCCTGTGCAAAGTTTaGAAGCATGGAGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQACLCKV*KHGAGR
Trigger: TCTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGCAGATCGCAGCAGTGTaGAATAAAGGGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVQIAAV*NKGEVA
Trigger: TGCCACCTCCCCTTTATTTCACACTGCTGCGATCTG...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTCAAACCTCAGCGGTTaGACAAAGGGTCACCGAGCT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQASNLSG*TKGHRA
Trigger: AGCTCGGTGACCCTTTGTTCAACCGCTGAGGTTTGA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGTCCCTGGGAAGAGTATaGAAATGGGGAGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQSLGRV*KWGEER
Trigger: CCTTTCTTCTCCCCATTTTCATACTCTTCCCAGGGA...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATAACTTGGTGGCCAGATaGTCCCCCTCTTCACTTCAC +
Preference number: 4 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDNLVAR*SPSSLH
Trigger: GTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGTT...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTGGGAAATTGGGCCCCTaGAGGAGACAGACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPGKLGP*RRQTVK
Trigger: TTTCACAGTCTGTCTCCTTCAGGGGCCCAATTTCCC...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGATCATCTCGCTCATCTaGTGGGTCCAAGCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAIISLI*WVQAPL
Trigger: AAGCGGAGCTTGGACCCAGCAGATGAGCGAGATGAT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACATTTTGAGTCGCTTTaGCAGGACATCATCTCGCTC +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERHFESL*QDIISL
Trigger: GAGCGAGATGATGTCCTGGCAAAGCGACTCAAAATG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACATGCTTGATAAGCTGCTaGCGCTCCTCAATGCCTTTC +
Preference number: 4 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTCLISC*RSSMPF
Trigger: GAAAGGCATTGAGGAGCGGCAGCAGCTTATCAAGCA...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGAGCTGCTTGATAAGCTaGTGCCGCTCCTCAATGCCT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQASCLIS*CRSSMP
Trigger: AGGCATTGAGGAGCGGCAGCAGCTTATCAAGCAGCT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATAGCTGCTTGATAAGCTaGTGCCGCTCCTCAATGCCT +
Preference number: 4 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDSCLIS*CRSSMP
Trigger: AGGCATTGAGGAGCGGCAGCAGCTTATCAAGCAGCT...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAAAGCTCATCCCTCAGCTaGTTGATAAGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKSSSLS*LISCCR
Trigger: GCGGCAGCAGCTTATCAAGCAGCTGAGGGATGAGCT...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGTGGCTGAACAATAGATaGTGCATTCTGTACAACTGG +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGWLNNR*CILYNW
Trigger: CCAGTTGTACAGAATGCAGCATCTATTGTTCAGCCA...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGGGGAGAGGGCTGCCTaGTGCTGTAATCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQGERAA*CCNRCS
Trigger: TGAACAGCGATTACAGCAGCAGGCAGCCCTCTCCCC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTGGGCAGATGTGGGTATaGCACGCTGGAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTGQMWV*HAGGCS
Trigger: AGAGCAGCCTCCAGCGTGGCATACCCACATCTGCCC...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGCTTTGTGTCCTCCGATaGCAGTATTCAAGTATGCAA +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGLCVLR*QYSSMQ
Trigger: TTGCATACTTGAATACTGGCATCGGAGGACACAAAG...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGATTCACGCTGTCGGTCTaGCAAACTGGGGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRFTLSV*QTGAFV
Trigger: CACAAAGGCCCCAGTTTGGCAGACCGACAGCGTGAA...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTAGCCCAGACACTGGCTaGATCTCTGCTCCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSSPDTG*ISAPLS
Trigger: ACTTAAAGGAGCAGAGATGCAGCCAGTGTCTGGGCT...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGCCAGCCAGACGGTATTaGACATTCTCTGTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWPARRY*TFSVPY
Trigger: GTAAGGAACAGAGAATGTGCAATACCGTCTGGCTGG...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAACCCCAGAAACCCTTTTaGACGGATCATACACAAACG +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEPQKPF*TDHTQT
Trigger: CGTTTGTGTATGATCCGTGCAAAAGGGTTTCTGGGG...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGTCATTCTATCCATCCTaGCGGTGGCGGTGTAACTCC +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVSFYPS*RWRCNS
Trigger: GGAGTTACACCGCCACCGCCAGGATGGATAGAATGA...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368655.5
CDS-3UTR CCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAATCTCGCTCATCTGCTaGGTCCAAGCTCCGCTTCAA +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRISLIC*VQAPLQ
Trigger: TTGAAGCGGAGCTTGGACCCAGCAGATGAGCGAGAT...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGATCTCGCTCATCTGCTaGGTCCAAGCTCCGCTTCAA +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHEISLIC*VQAPLQ
Trigger: TTGAAGCGGAGCTTGGACCCAGCAGATGAGCGAGAT...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACATGCCATCCTGTTTGGTaGGTAACTCATGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTCHPVW*VTHVAP
Trigger: AGGTGCCACATGAGTTACCCACCAAACAGGATGGCA...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTCACTGCCATCCTGTTTaGTGGGTAACTCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSHCHPV*WVTHVA
Trigger: TGCCACATGAGTTACCCACCAAACAGGATGGCAGTG...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTCACATGGGCAGGAGATaGCTGAACAATAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSHMGRR*LNNRCC
Trigger: GCAGCATCTATTGTTCAGCCATCTCCTGCCCATGTG...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTTCATGTTGGGTGTTGTaGTGCGTACAAGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPSCWVL*CVQGQA
Trigger: AGCCTGGCCTTGTACGCACCACAACACCCAACATGA...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTGCTGGGGCTAGGAAGTaGCGAGGACACTCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSAGARK*RGHSVH
Trigger: GTGAACAGAGTGTCCTCGCCACTTCCTAGCCCCAGC...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGCTGCAGCCTGTGAGTTaGCAGCATCAGTCATGGCGC +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQLQPVS*QHQSWR
Trigger: GCGCCATGACTGATGCTGCCAACTCACAGGCTGCAG...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTGCGAAGAGCCAATTTaGCTGCAGCCTGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQACEEPI*LQPVSW
Trigger: CCAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATGCACAGCTTTTGCCTTaGCTGTCAATGACACTCTGT +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYAQLLP*LSMTLC
Trigger: ACAGAGTGTCATTGACAGCCAAGGCAAAAGCTGTGC...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAGAGCCTTTTTCTGGTTaGAGGTCATACACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEEPFSG*RSYTAH
Trigger: GTGAGCAGTGTATGACCTCCAACCAGAAAAAGGCTC...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGCATTTTTCAGCCGGTTaGTGTGTTCAGCTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGHFSAG*CVQLLE
Trigger: CTCTAAAAGCTGAACACACCAACCGGCTGAAAAATG...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATAAGATCATGGAGCGGGCAGATGTaGGTATGCCACGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NSMTYKGEGWGCLPLIRSWSGQM*VCHAGG
Trigger: GCCTCCAGCGTGGCATACCCACATCTGCCCGCTCCA...TGATCTTATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTCAAAGTTTGAAAGCATaGAGCGGGCAGATGTGGGTA +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRQSLKA*SGQMWV
Trigger: TACCCACATCTGCCCGCTCCATGCTTTCAAACTTTG...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGTCGGTCTGCCAAACTaGGGCCTTTGTGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQVGLPN*GLCVLR
Trigger: TCGGAGGACACAAAGGCCCCAGTTTGGCAGACCGAC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTTTGGGCTGGTTGGCCTaGAATAGACTTCCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPLGWLA*NRLPCS
Trigger: GGAACACGGAAGTCTATTCCAGGCCAACCAGCCCAA...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACAACCCCATTCTAAGGTaGCCTGGCTCCCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHNPILR*PGSQGK
Trigger: CTTTCCCTGGGAGCCAGGCCACCTTAGAATGGGGTT...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGTCCATCACTAATCCCTaGGAAGAGTATGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGSITNP*EEYENG
Trigger: CCCATTTTCATACTCTTCCCAGGGATTAGTGATGGA...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAGAAGCCAGGCAGAACTaGTGGGATCCTCACTCTACT +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMREARQN*WDPHST
Trigger: AGTAGAGTGAGGATCCCACCAGTTCTGCCTGGCTTC...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAATACTCTACAAAGTCCTaGACCAGGAGGTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEYSTKS*TRRSWL
Trigger: AAGCCAAGACCTCCTGGTCCAGGACTTTGTAGAGTA...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAGAAAAAGATTGGTTGAGTGGGGGAAGGTTTAACCGTCCACTGAACAAAGGGTGGTTGGCTGTGAGATaGGGCTTGAGGCCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: KEKDWLSGGRFNRPLNKGWLAVR*GLRPSP
Trigger: GGGACTAGGCCTCAAGCCCCATCTCACAGCCAACCA...CCCTTTGTTCAGTGGACGGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTACTCAGCCCAGGCTGTaGGGAAATTGGGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSTQPRL*GNWAPE
Trigger: TTCAGGGGCCCAATTTCCCCACAGCCTGGGCTGAGT...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATAAAGTCCCCGCCCTCCTaGAGCTCGCTCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: FNNSMTYKGEGWGCLPLIKSPPS*SSLWGR
Trigger: TCTACCCCAGAGCGAGCTCCAGGAGGGCGGGGACTT...TATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACCTCAGGAACTGAACTaGAAGACAGATCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERPQELN*KTDPVC
Trigger: ACACACTGGATCTGTCTTCCAGTTCAGTTCCTGAGG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634544.1
CDS-3UTR TCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTCTAAGTTGGCTGCTTTaGGTCTTTCTTCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRLSWLL*VFLPFW
Trigger: CCAGAATGGAAGAAAGACTCAAAGCAGCCAACTTAG...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAACTAAGTTGGCTGCTTTaGGTCTTTCTTCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNELSWLL*VFLPFW
Trigger: CCAGAATGGAAGAAAGACTCAAAGCAGCCAACTTAG...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTGGGCAGGAGATGGCTaGACAATAGATGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAWAGDG*TIDAAF
Trigger: GAATGCAGCATCTATTGTTCAGCCATCTCCTGCCCA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGAGGTGCAATAACACGTTaGGACATCAACATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERGAITR*DINMCG
Trigger: TCCACACATGTTGATGTCTCAACGTGTTATTGCACC...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGGAGGATGTTGTACGCTaGCATGGAACAGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQEDVVR*HGTEEL
Trigger: AAGTTCTTCTGTTCCATGTCAGCGTACAACATCCTC...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGAGCCTACCATGTAGATaGACTCGCTATTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQASLPCR*TRYWLH
Trigger: GTGCAGCCAATAGCGAGTTCATCTACATGGTAGGCT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTGGTCTCTTGTTTACTaGCACTGGACACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAWSLVY*HWTQLE
Trigger: CTCCAGCTGTGTCCAGTGTCAGTAAACAAGAGACCA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAACAGATCGCAGCAGTGTaGAATAAAGGGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: EERRQNVGCVCALLFYHQQIAAV*NKGEVA
Trigger: TGCCACCTCCCCTTTATTTCACACTGCTGCGATCTG...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTTGCCACAAGGCAAGATaGCTTGTGGGGAAAACATTT +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRCHKAR*LVGKTF
Trigger: AAATGTTTTCCCCACAAGTCATCTTGCCTTGTGGCA...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTAACTTGGTGGCCAGATaGTCCCCCTCTTCACTTCAC +
Preference number: 4 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGNLVAR*SPSSLH
Trigger: GTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGTT...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACATTAGCGGGGTTCAGATaGAATCTGAGGAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTLAGFR*NLRKGD
Trigger: GTCTCCTTTCCTCAGATTTCATCTGAACCCCGCTAA...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATAAGATCATGCAGCGCCCTGGATTaGACATCAGAGACGGAGCCC +
Preference number: 4 (lower is better)
Translates to: NSMTYKGEGWGCLPLIRSCSALD*TSETEP
Trigger: GGGCTCCGTCTCTGATGTTCAATCCAGGGCGCTGCA...TGATCTTATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR GCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACATCATCTCGCTCATCTaGTGGGTCCAAGCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHIISLI*WVQAPL
Trigger: AAGCGGAGCTTGGACCCAGCAGATGAGCGAGATGAT...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATTGCTTGATAAGCTGCTaGCGCTCCTCAATGCCTTTC +
Preference number: 4 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDCLISC*RSSMPF
Trigger: GAAAGGCATTGAGGAGCGGCAGCAGCTTATCAAGCA...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAAAGCTGCTTGATAAGCTaGTGCCGCTCCTCAATGCCT +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKSCLIS*CRSSMP
Trigger: AGGCATTGAGGAGCGGCAGCAGCTTATCAAGCAGCT...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGAGCTCATCCCTCAGCTaGTTGATAAGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQSSSLS*LISCCR
Trigger: GCGGCAGCAGCTTATCAAGCAGCTGAGGGATGAGCT...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGAGCTTAGATAGGCCCTaGTGTCCCACATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQSLDRP*CPTWAG
Trigger: TCCTGCCCATGTGGGACAGCAGGGCCTATCTAAGCT...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGTCTTTTCCAGCTGTTTaGGAAGAGCCAATTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWSFPAV*EEPIWL
Trigger: CAGCCAAATTGGCTCTTCGCAAACAGCTGGAAAAGA...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAGAGAGGGCTGCCTGCTaGTGTAATCGCTGTTCAATT +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRERAAC*CNRCSI
Trigger: AATTGAACAGCGATTACAGCAGCAGGCAGCCCTCTC...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTTCACGCTGTCGGTCTaGCAAACTGGGGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQFTLSV*QTGAFV
Trigger: CACAAAGGCCCCAGTTTGGCAGACCGACAGCGTGAA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTGTCCACTGATGGACTaGGATATAGACCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQCPLMD*DIDRGG
Trigger: CCCTCCCCGGTCTATATCGCAGTCCATCAGTGGACA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGAGCTGGGACCCCTACTaGAATCTGCAATGCTCGTAT +
Preference number: 4 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMSWDPY*NLQCSY
Trigger: ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCT...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACCTCCTCCGGTTAAGTaGATTCAAAACTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRPPPVK*IQNFCP
Trigger: GGGGCAGAAGTTTTGAATGCACTTAACCGGAGGAGG...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACACACCCACAGGTAGGGTaGTATTCGTCCTTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTHPQVG*YSSFFD
Trigger: ATCAAAGAAGGACGAATAGCACCCTACCTGTGGGTG...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATTTGAGCAGTTGGTTCTaGAGCTGGTGCAGCAGAGTA +
Preference number: 4 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDLSSWF*SWCSRV
Trigger: TACTCTGCTGCACCAGCTGCAGAACCAACTGCTCAA...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTTTGAGCAGTTGGTTCTaGAGCTGGTGCAGCAGAGTA +
Preference number: 4 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPLSSWF*SWCSRV
Trigger: TACTCTGCTGCACCAGCTGCAGAACCAACTGCTCAA...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATGGAGAGAAGGGTTATaGCTTCTGGAGGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKWREGL*LLEEWG
Trigger: TCCCCACTCCTCCAGAAGGCATAACCCTTCTCTCCA...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATGTGGGGGAAATCCCTTaGATAAGAAAGCTTGACACT +
Preference number: 4 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYVGEIP*IRKLDT
Trigger: AGTGTCAAGCTTTCTTATGCAAGGGATTTCCCCCAC...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAATGTGGGCTGTGTCTaGGCTCTCCTATTTTATCAC +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQNVGCV*ALLFYH
Trigger: GTGATAAAATAGGAGAGCGCAGACACAGCCCACATT...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGTCTTTCTTCCATTCTaGAACTGGAACGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAVFLPF*NWNGDW
Trigger: CCAGTCCCCGTTCCAGTTCCAGAATGGAAGAAAGAC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAGTCTTTCTTCCATTCTaGAACTGGAACGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRVFLPF*NWNGDW
Trigger: CCAGTCCCCGTTCCAGTTCCAGAATGGAAGAAAGAC...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGCACATGGGCAGGAGATaGCTGAACAATAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAHMGRR*LNNRCC
Trigger: GCAGCATCTATTGTTCAGCCATCTCCTGCCCATGTG...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGAAGACATCAACATGTGTaGAAGGGTGGTATTGGTAGC +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERRHQHV*KGGIGS
Trigger: GCTACCAATACCACCCTTCCACACATGTTGATGTCT...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTGGCGGGATTCATGTTaGGTGTTGTGGTGCGTACAA +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAWRDSC*VLWCVQ
Trigger: TTGTACGCACCACAACACCCAACATGAATCCCGCCA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGATGGCGGGATTCATGTTaGGTGTTGTGGTGCGTACAA +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRWRDSC*VLWCVQ
Trigger: TTGTACGCACCACAACACCCAACATGAATCCCGCCA...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGTCTGTTCACCGTCCCTaGCTGGATATGAGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMSVHRP*LDMRSK
Trigger: CTTGCTTCTCATATCCAGCCAGGGACGGTGAACAGA...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTCTGTTCACCGTCCCTaGCTGGATATGAGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQASVHRP*LDMRSK
Trigger: CTTGCTTCTCATATCCAGCCAGGGACGGTGAACAGA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCGAAGAGCCAATTTaGCTGCAGCCTGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHCEEPI*LQPVSW
Trigger: CCAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCA...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAAAGGAGGTTTAGGGGGTaGGATCTCCAGGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKRRFRG*DLQECL
Trigger: AAGACACTCCTGGAGATCCCACCCCCTAAACCTCCT...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACAGGAGGTTTAGGGGGTaGGATCTCCAGGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHRRFRG*DLQECL
Trigger: AAGACACTCCTGGAGATCCCACCCCCTAAACCTCCT...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAACCTGGCACAGACAACTaGGGTGCCTGTGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: EERRQNVGCVCALLFYHQPGTDN*GACAKF
Trigger: AAACTTTGCACAGGCACCCCAGTTGTCTGTGCCAGG...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGACCTGGCACAGACAACTaGGGTGCCTGTGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRPGTDN*GACAKF
Trigger: AAACTTTGCACAGGCACCCCAGTTGTCTGTGCCAGG...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACCCTGGCACAGACAACTaGGGTGCCTGTGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHPGTDN*GACAKF
Trigger: AAACTTTGCACAGGCACCCCAGTTGTCTGTGCCAGG...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp CCCAGTCTCTTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTGGCACAGACAACTaGGGTGCCTGTGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: PSLFNNSMTYKGEGWGCLPGTDN*GACAKF
Trigger: AAACTTTGCACAGGCACCCCAGTTGTCTGTGCCAGG...CAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAAGAGACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CCA 90 bp AATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATAAGATCAACCAAGGAGGCCACCTaGCACAGACAACTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: NSMTYKGEGWGCLPLIRSTKEAT*HRQLGC
Trigger: GCACCCCAGTTGTCTGTGCCAGGTGGCCTCCTTGGT...TGATCTTATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTGTCGGTCTGCCAAACTaGGGCCTTTGTGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTVGLPN*GLCVLR
Trigger: TCGGAGGACACAAAGGCCCCAGTTTGGCAGACCGAC...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGAATGGGGCAGTACAAGTaGAACAGGCGTTATTTCTGT +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERMGQYK*NRRYFC
Trigger: ACAGAAATAACGCCTGTTCCACTTGTACTGCCCCAT...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGAGTTGGTTCTGCAGCTaGTGCAGCAGAGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMSWFCS*CSRVRT
Trigger: TGTCCTTACTCTGCTGCACCAGCTGCAGAACCAACT...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTAGATCATTTCACCACTaGGGGAGCCCAGACACTGGC +
Preference number: 4 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSRSFHH*GSPDTG
Trigger: GCCAGTGTCTGGGCTCCCCCAGTGGTGAAATGATCT...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGACACGGCCCAGAGCCTaGAGATGGATAGTAACAAGT +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVTRPRA*RWIVTS
Trigger: ACTTGTTACTATCCATCTCCAGGCTCTGGGCCGTGT...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGCTAAGGCTGTGCAGATaGATGTGGCTCTCACTAGGT +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVLRLCR*MWLSLG
Trigger: ACCTAGTGAGAGCCACATCCATCTGCACAGCCTTAG...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTTTCTTCATAGCCCTTaGCACCACTGCCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAFLHSP*HHCHPV
Trigger: AACAGGATGGCAGTGGTGTCAAGGGCTATGAAGAAA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGTCCTGTTGTCTCCATaGGGCCTGAGATTCCCGTTA +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQVLLSP*GLRFPL
Trigger: TAACGGGAATCTCAGGCCTCATGGAGACAACAGGAC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTTGGGCAGGAGATGGCTaGACAATAGATGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGWAGDG*TIDAAF
Trigger: GAATGCAGCATCTATTGTTCAGCCATCTCCTGCCCA...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGGTGGTATTGGTAGCTaGACGGATGACACTGTGACC +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQGGIGS*TDDTVT
Trigger: GGTCACAGTGTCATCCGTTCAGCTACCAATACCACC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTTTGGCTGCAGCCTGTaGGTTGGCAGCATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQFGCSL*VGSISH
Trigger: ATGACTGATGCTGCCAACTCACAGGCTGCAGCCAAA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACAGCCTACCATGTAGATaGACTCGCTATTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHSLPCR*TRYWLH
Trigger: GTGCAGCCAATAGCGAGTTCATCTACATGGTAGGCT...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGTGCCTTGGCTGTCAATaGCACTCTGTACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHECLGCQ*HSVRLL
Trigger: AAGAAGTCGTACAGAGTGTCATTGACAGCCAAGGCA...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTGCCTTGGCTGTCAATaGCACTCTGTACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQACLGCQ*HSVRLL
Trigger: AAGAAGTCGTACAGAGTGTCATTGACAGCCAAGGCA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGTGCCTTGGCTGTCAATaGCACTCTGTACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVCLGCQ*HSVRLL
Trigger: AAGAAGTCGTACAGAGTGTCATTGACAGCCAAGGCA...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTTTCAACCCGCAGAAGTaGGGCACAGCTTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSFNPQK*GTAFAL
Trigger: CAAGGCAAAAGCTGTGCCTCACTTCTGCGGGTTGAA...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTTCAACCCGCAGAAGTaGGGCACAGCTTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQFNPQK*GTAFAL
Trigger: CAAGGCAAAAGCTGTGCCTCACTTCTGCGGGTTGAA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTTTTCTTGCTTCCAGTaGGGGGTGAAATCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHFSCFQ*GVKSVR
Trigger: CCGCACAGATTTCACCCCTCACTGGAAGCAAGAAAA...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp AAAGAAAAAGATTGGTTGAGTGGGGGAAGGTTTAACCGTCCACTGAACAAAGGGGCCTGCCGAAGCGTATaGTGTCTCATGATGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KEKDWLSGGRFNRPLNKGACRSV*CLMMVS
Trigger: AGAGACCATCATGAGACATCATACGCTTCGGCAGGC...CCCTTTGTTCAGTGGACGGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCCTGCCGAAGCGTATaGTGTCTCATGATGGTCTCT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQACRSV*CLMMVS
Trigger: AGAGACCATCATGAGACATCATACGCTTCGGCAGGC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGACTGTTAAAGAAAACTaGAGAGAGAAGACAGAGCGG +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWTVKEN*REKTER
Trigger: CCGCTCTGTCTTCTCTCTTCAGTTTTCTTTAACAGT...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAAGGTTTAACCGTCCACTaGACAAAGGGAGGACACACA +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKGLTVH*TKGGHT
Trigger: TGTGTGTCCTCCCTTTGTTCAGTGGACGGTTAAACC...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGTCCCTGGCTCATAATTaGGCCCATCTTCATACCTCT +
Preference number: 4 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMSLAHN*AHLHTS
Trigger: AGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGA...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAGGAAACTTCCTCAGGTaGCTTTCAAGGGCAAAATAT +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEGNFLR*LSRAKY
Trigger: ATATTTTGCCCTTGAAAGTCACCTGAGGAAGTTTCC...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGGGAAACTTCCTCAGGTaGCTTTCAAGGGCAAAATAT +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWGNFLR*LSRAKY
Trigger: ATATTTTGCCCTTGAAAGTCACCTGAGGAAGTTTCC...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTCCTTTAAGTGCTCAATaGATTTGGGGTAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSPLSAQ*IWGKGG
Trigger: TCCTCCCTTACCCCAAATTCATTGAGCACTTAAAGG...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGTTAGCGGGGTTCAGATaGAATCTGAGGAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMLAGFR*NLRKGD
Trigger: GTCTCCTTTCCTCAGATTTCATCTGAACCCCGCTAA...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTGGGAAATTGGGCCCCTaGAGGAGACAGACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSGKLGP*RRQTVK
Trigger: TTTCACAGTCTGTCTCCTTCAGGGGCCCAATTTCCC...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTCTATCCATCCTTTATaGAACGGGAAAGCTGTACCG +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSSIHPL*NGKAVP
Trigger: CGGTACAGCTTTCCCGTTTCATAAAGGATGGATAGA...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634544.1
CDS-3UTR GCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTTGGCTGAACAATAGATaGTGCATTCTGTACAACTGG +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRWLNNR*CILYNW
Trigger: CCAGTTGTACAGAATGCAGCATCTATTGTTCAGCCA...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGCTGGGCTGGGTTTGGTaGAATAACACGTTGAGACAT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQALGWVW*NNTLRH
Trigger: ATGTCTCAACGTGTTATTGCACCAAACCCAGCCCAG...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGCTGGGCTGGGTTTGGTaGAATAACACGTTGAGACAT +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVLGWVW*NNTLRH
Trigger: ATGTCTCAACGTGTTATTGCACCAAACCCAGCCCAG...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTCTTTTCCAGCTGTTTaGGAAGAGCCAATTTGGCTG +
Preference number: 4 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSSFPAV*EEPIWL
Trigger: CAGCCAAATTGGCTCTTCGCAAACAGCTGGAAAAGA...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp GGGGTGTTTGCCTTTGATAAGATCATTAAGAGACACAATAATCAAATGCAGCGTGGGCAGATGTGGGTATaGCACGCTGGAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GVFAFDKIIKRHNNQMQRGQMWV*HAGGCS
Trigger: AGAGCAGCCTCCAGCGTGGCATACCCACATCTGCCC...ACGCTGCATTTGATTATTGTGTCTCTTAATGATCTTATCAAAGGCAAACACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR GCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTTGTCCACTGATGGACTaGGATATAGACCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTCPLMD*DIDRGG
Trigger: CCCTCCCCGGTCTATATCGCAGTCCATCAGTGGACA...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAACCCCTACTGCAATCTaGAATGCTCGTATCATTGAA +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNETPTAI*NARIIE
Trigger: TTCAATGATACGAGCATTGCAGATTGCAGTAGGGGT...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACAGCTGGGACCCCTACTaGAATCTGCAATGCTCGTAT +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHSWDPY*NLQCSY
Trigger: ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCT...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGCACTGGCTGCATCTCTaGTCCTTTAAGTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHEHWLHL*SFKCSM
Trigger: CATTGAGCACTTAAAGGAGCAGAGATGCAGCCAGTG...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGAAGCCCAGACACTGGCTaGATCTCTGCTCCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRSPDTG*ISAPLS
Trigger: ACTTAAAGGAGCAGAGATGCAGCCAGTGTCTGGGCT...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACCAGCCAGACGGTATTaGACATTCTCTGTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRPARRY*TFSVPY
Trigger: GTAAGGAACAGAGAATGTGCAATACCGTCTGGCTGG...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGATCTCGCTCATCTGCTaGGTCCAAGCTCCGCTTCAA +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQISLIC*VQAPLQ
Trigger: TTGAAGCGGAGCTTGGACCCAGCAGATGAGCGAGAT...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGATTTTCAGACGTTCCATaGCCTCATGCCCCTCCATTT +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRFSDVP*PHAPPF
Trigger: AAATGGAGGGGCATGAGGCCATGGAACGTCTGAAAA...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGTTTTCAGACGTTCCATaGCCTCATGCCCCTCCATTT +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVFSDVP*PHAPPF
Trigger: AAATGGAGGGGCATGAGGCCATGGAACGTCTGAAAA...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATGCCATCCTGTTTGGTaGGTAACTCATGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKCHPVW*VTHVAP
Trigger: AGGTGCCACATGAGTTACCCACCAAACAGGATGGCA...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTAACTGGAACGGGGACTaGAAGCCTCATTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGNWNGD*KPHCQT
Trigger: TGTCTGACAATGAGGCTTCCAGTCCCCGTTCCAGTT...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAAAACTGGAACGGGGACTaGAAGCCTCATTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKNWNGD*KPHCQT
Trigger: TGTCTGACAATGAGGCTTCCAGTCCCCGTTCCAGTT...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAAGTCTTTCTTCCATTCTaGAACTGGAACGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: EERRQNVGCVCALLFYHQVFLPF*NWNGDW
Trigger: CCAGTCCCCGTTCCAGTTCCAGAATGGAAGAAAGAC...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAACAACTGGAGTCTTCTaGACCACATTCTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNETTGVF*TTFSFC
Trigger: ACAGAAAGAGAATGTGGTCCAGAAGACTCCAGTTGT...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAACACATGGGCAGGAGATaGCTGAACAATAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKHMGRR*LNNRCC
Trigger: GCAGCATCTATTGTTCAGCCATCTCCTGCCCATGTG...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACAAGGTTCATATAGATaGCAGAGGATGTTGTACGCT +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERQGSYR*QRMLYA
Trigger: AGCGTACAACATCCTCTGCCATCTATATGAACCTTG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGAGGAGGTTTAGGGGGTaGGATCTCCAGGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQRRFRG*DLQECL
Trigger: AAGACACTCCTGGAGATCCCACCCCCTAAACCTCCT...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGCACAGCTTTTGCCTTaGCTGTCAATGACACTCTGT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAAQLLP*LSMTLC
Trigger: ACAGAGTGTCATTGACAGCCAAGGCAAAAGCTGTGC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATAAATCTGTGCGGCACTaGGCACATACAAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDKSVRH*AHTKGS
Trigger: TGAACCCTTTGTATGTGCCCAGTGCCGCACAGATTT...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGAAATCTGTGCGGCACTaGGCACATACAAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAKSVRH*AHTKGS
Trigger: TGAACCCTTTGTATGTGCCCAGTGCCGCACAGATTT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGGAGCCTTTTTCTGGTTaGAGGTCATACACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVEPFSG*RSYTAH
Trigger: GTGAGCAGTGTATGACCTCCAACCAGAAAAAGGCTC...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAGAGCCTTTTTCTGGTTaGAGGTCATACACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMREPFSG*RSYTAH
Trigger: GTGAGCAGTGTATGACCTCCAACCAGAAAAAGGCTC...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAACATTTTTCAGCCGGTTaGTGTGTTCAGCTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEHFSAG*CVQLLE
Trigger: CTCTAAAAGCTGAACACACCAACCGGCTGAAAAATG...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTGACACTGGACACAGCTaGAGCCGTAGTGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTDTGHS*SRSGGE
Trigger: CTCTCCCCCACTACGGCTCCAGCTGTGTCCAGTGTC...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGCAAAGTTTGAAAGCATaGAGCGGGCAGATGTGGGTA +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAQSLKA*SGQMWV
Trigger: TACCCACATCTGCCCGCTCCATGCTTTCAAACTTTG...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGCAAAGTTTGAAAGCATaGAGCGGGCAGATGTGGGTA +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVQSLKA*SGQMWV
Trigger: TACCCACATCTGCCCGCTCCATGCTTTCAAACTTTG...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGCCTGGCACAGACAACTaGGGTGCCTGTGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQPGTDN*GACAKF
Trigger: AAACTTTGCACAGGCACCCCAGTTGTCTGTGCCAGG...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTGCAATGTTGACACCTaGCATACCAAGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQCNVDT*HTKEAT
Trigger: GGTGGCCTCCTTGGTATGCCAGGTGTCAACATTGCA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGCATGCGACAGAAGTTaGGGGAATGAAAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAACDRS*GNERGK
Trigger: CTTTCCTCTTTCATTCCCCCAACTTCTGTCGCATGC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTGCAGAGGTCCTAAGCTaGTTTTGCCATGAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPAEVLS*FCHELF
Trigger: AAACAGCTCATGGCAAAACCAGCTTAGGACCTCTGC...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGAACTTCAAAAACAGCCTaGTCCACTCCGTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRTSKTA*STPSSH
Trigger: GTGGGAAGACGGAGTGGACCAGGCTGTTTTTGAAGT...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTACTTCAAAAACAGCCTaGTCCACTCCGTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGTSKTA*STPSSH
Trigger: GTGGGAAGACGGAGTGGACCAGGCTGTTTTTGAAGT...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACGCCAGGCAGAACTGGTaGGATCCTCACTCTACTAAT +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHARQNW*DPHSTN
Trigger: ATTAGTAGAGTGAGGATCCCACCAGTTCTGCCTGGC...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGTACTCTACAAAGTCCTaGACCAGGAGGTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMYSTKS*TRRSWL
Trigger: AAGCCAAGACCTCCTGGTCCAGGACTTTGTAGAGTA...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTAGGCAAAGATGTCACTaGTCTGATGCCCTGGACATG +
Preference number: 4 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGRQRCH*SDALDM
Trigger: CATGTCCAGGGCATCAGACCAGTGACATCTTTGCCT...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp GGGGTGTTTGCCTTTGATAAGATCATTAAGAGACACAATAATCAAATGCAGCGTGACATTGGGCCCACCTaGCATACCAAGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: GVFAFDKIIKRHNNQMQRDIGPT*HTKEAT
Trigger: GGTGGCCTCCTTGGTATGCCAGGTGGGCCCAATGTC...ACGCTGCATTTGATTATTGTGTCTCTTAATGATCTTATCAAAGGCAAACACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CCA 90 bp GGGGTGTTTGCCTTTGATAAGATCATTAAGAGACACAATAATCAAATGCAGCGTTGCCAGACTCTGCTCTaGGCACACAGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GVFAFDKIIKRHNNQMQRCQTLL*AHSWEH
Trigger: GTGCTCCCAGCTGTGTGCCCAGAGCAGAGTCTGGCA...ACGCTGCATTTGATTATTGTGTCTCTTAATGATCTTATCAAAGGCAAACACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR TCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTCATGCCCCTCCATTTTaGGTCGCTTTGCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTHAPPF*VALPGH
Trigger: ATGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATG...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTCCAAATCCTTCCTTTTaGGCAATGCCAACATTTTCA +
Preference number: 4 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRPNPSF*AMPTFS
Trigger: TGAAAATGTTGGCATTGCTCAAAAGGAAGGATTTGG...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATTTCTTCATAGCCCTTaGCACCACTGCCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKFLHSP*HHCHPV
Trigger: AACAGGATGGCAGTGGTGTCAAGGGCTATGAAGAAA...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGCTAAGTTGGCTGCTTTaGGTCTTTCTTCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHELSWLL*VFLPFW
Trigger: CCAGAATGGAAGAAAGACTCAAAGCAGCCAACTTAG...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGCTAAGTTGGCTGCTTTaGGTCTTTCTTCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQALSWLL*VFLPFW
Trigger: CCAGAATGGAAGAAAGACTCAAAGCAGCCAACTTAG...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTGGGCAGGAGATGGCTaGACAATAGATGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQWAGDG*TIDAAF
Trigger: GAATGCAGCATCTATTGTTCAGCCATCTCCTGCCCA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTGAACGGATGACACTGTaGCCCTGTAATGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPERMTL*PCNVLK
Trigger: TTTGAGAACATTACAGGGTCACAGTGTCATCCGTTC...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAGAACGGATGACACTGTaGCCCTGTAATGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRERMTL*PCNVLK
Trigger: TTTGAGAACATTACAGGGTCACAGTGTCATCCGTTC...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAGGTGCAATAACACGTTaGGACATCAACATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRGAITR*DINMCG
Trigger: TCCACACATGTTGATGTCTCAACGTGTTATTGCACC...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGGTGCAATAACACGTTaGGACATCAACATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAGAITR*DINMCG
Trigger: TCCACACATGTTGATGTCTCAACGTGTTATTGCACC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACACTGCGGTTGATAATTaGTGGCGGGATTCATGTTGG +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHTAVDN*WRDSCW
Trigger: CCAACATGAATCCCGCCATCAATTATCAACCGCAGT...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAGAGGATGTTGTACGCTaGCATGGAACAGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMREDVVR*HGTEEL
Trigger: AAGTTCTTCTGTTCCATGTCAGCGTACAACATCCTC...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGAGGATGTTGTACGCTaGCATGGAACAGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAEDVVR*HGTEEL
Trigger: AAGTTCTTCTGTTCCATGTCAGCGTACAACATCCTC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTTTTGGCTGCAGCCTGTaGGTTGGCAGCATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTFGCSL*VGSISH
Trigger: ATGACTGATGCTGCCAACTCACAGGCTGCAGCCAAA...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAATGCCTTGGCTGTCAATaGCACTCTGTACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: EERRQNVGCVCALLFYHQCLGCQ*HSVRLL
Trigger: AAGAAGTCGTACAGAGTGTCATTGACAGCCAAGGCA...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTTTTCTTGCTTCCAGTaGGGGGTGAAATCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQFSCFQ*GVKSVR
Trigger: CCGCACAGATTTCACCCCTCACTGGAAGCAAGAAAA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGTCAAGTATGCAATGTTaGCACCTGGCATACCAAGGA +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHESSMQC*HLAYQG
Trigger: TCCTTGGTATGCCAGGTGTCAACATTGCATACTTGA...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTCAAGTATGCAATGTTaGCACCTGGCATACCAAGGA +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQASSMQC*HLAYQG
Trigger: TCCTTGGTATGCCAGGTGTCAACATTGCATACTTGA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGTCAAGTATGCAATGTTaGCACCTGGCATACCAAGGA +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVSSMQC*HLAYQG
Trigger: TCCTTGGTATGCCAGGTGTCAACATTGCATACTTGA...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAACCTCCTGTTGTCACTTaGCTCATTTATGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKPPVVT*LIYVHP
Trigger: TGGGTGGACATAAATGAGTCAAGTGACAACAGGAGG...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTGACAGGACTCCAACCTaGTTGTGTACCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTDRTPT*LCTPSL
Trigger: GAGGCTGGGGGTACACAATCAGGTTGGAGTCCTGTC...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGGTGGGTGTACACTATaGGAAGAGCAGAAACCCGTA +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQGGCTL*EEQKPV
Trigger: TACGGGTTTCTGCTCTTCTCATAGTGTACACCCACC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGTGCCACAAGGCAAGATaGCTTGTGGGGAAAACATTT +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHECHKAR*LVGKTF
Trigger: AAATGTTTTCCCCACAAGTCATCTTGCCTTGTGGCA...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATCCCTGGGAAGAGTATaGAAATGGGGAGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKSLGRV*KWGEER
Trigger: CCTTTCTTCTCCCCATTTTCATACTCTTCCCAGGGA...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGGTTAACACTTTACCATaGTTAGGGAGACCTCACCTC +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVVNTLP*LGRPHL
Trigger: GAGGTGAGGTCTCCCTAATCATGGTAAAGTGTTAAC...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTCCTGTCCTTAGGGCATaGGGTTTAGTGTCTACACGG +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTPVLRA*GLVSTR
Trigger: CCGTGTAGACACTAAACCTCATGCCCTAAGGACAGG...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGAAGATGTCACTGGTCTaGTGCCCTGGACATGACTCT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQKMSLV*CPGHDS
Trigger: AGAGTCATGTCCAGGGCATCAGACCAGTGACATCTT...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAATGCTCAGCAGCATCTaGAACAGATGGGAGTGTATT +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRMLSSI*NRWECI
Trigger: AATACACTCCCATCTGTTTCAGATGCTGCTGAGCAT...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTGGAACAGAAGAACTTaGCTGAAGGCCAGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQWNRRT*LKARLR
Trigger: CCTAAGCCTGGCCTTCAGTCAAGTTCTTCTGTTCCA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634408.1
CDS-3UTR GCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTATCATCTCGCTCATCTaGTGGGTCCAAGCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTIISLI*WVQAPL
Trigger: AAGCGGAGCTTGGACCCAGCAGATGAGCGAGATGAT...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTGCTTGATAAGCTGCTaGCGCTCCTCAATGCCTTTC +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQCLISC*RSSMPF
Trigger: GAAAGGCATTGAGGAGCGGCAGCAGCTTATCAAGCA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGCTGAACAATAGATGCTaGATTCTGTACAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQLNNRC*ILYNWS
Trigger: ACTCCAGTTGTACAGAATGCAGCATCTATTGTTCAG...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACTGAACAATAGATGCTaGATTCTGTACAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERLNNRC*ILYNWS
Trigger: ACTCCAGTTGTACAGAATGCAGCATCTATTGTTCAG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATTCTTTTCCAGCTGTTTaGGAAGAGCCAATTTGGCTG +
Preference number: 4 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDSFPAV*EEPIWL
Trigger: CAGCCAAATTGGCTCTTCGCAAACAGCTGGAAAAGA...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTCTTTTCCAGCTGTTTaGGAAGAGCCAATTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQASFPAV*EEPIWL
Trigger: CAGCCAAATTGGCTCTTCGCAAACAGCTGGAAAAGA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGTTGGAGGTCATACACTaGTCACATAGAATCTTACCA +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWLEVIH*SHRILP
Trigger: TGGTAAGATTCTATGTGAGCAGTGTATGACCTCCAA...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGTCAATTTCCTGTTCCTaGTGTAGGGCTTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWSISCS*CRAFTN
Trigger: ATTTGTGAAAGCCCTACAGCAGGAACAGGAAATTGA...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGAGAGGGCTGCCTGCTaGTGTAATCGCTGTTCAATT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQERAAC*CNRCSI
Trigger: AATTGAACAGCGATTACAGCAGCAGGCAGCCCTCTC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTTGGAGAGAAGGGTTATaGCTTCTGGAGGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTWREGL*LLEEWG
Trigger: TCCCCACTCCTCCAGAAGGCATAACCCTTCTCTCCA...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAACCCCAGAAACCCTTTTaGACGGATCATACACAAACG +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKPQKPF*TDHTQT
Trigger: CGTTTGTGTATGATCCGTGCAAAAGGGTTTCTGGGG...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGCTGTCACTGCTGAAATaGTCAGCAGCATCTGAAACA +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQALSLLK*SAASET
Trigger: TGTTTCAGATGCTGCTGAGCATTTCAGCAGTGACAG...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTTTTCAGACGTTCCATaGCCTCATGCCCCTCCATTT +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHFSDVP*PHAPPF
Trigger: AAATGGAGGGGCATGAGGCCATGGAACGTCTGAAAA...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTGCCATCCTGTTTGGTaGGTAACTCATGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQCHPVW*VTHVAP
Trigger: AGGTGCCACATGAGTTACCCACCAAACAGGATGGCA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGCACTGCCATCCTGTTTaGTGGGTAACTCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQHCHPV*WVTHVA
Trigger: TGCCACATGAGTTACCCACCAAACAGGATGGCAGTG...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGAACTGGAACGGGGACTaGAAGCCTCATTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQNWNGD*KPHCQT
Trigger: TGTCTGACAATGAGGCTTCCAGTCCCCGTTCCAGTT...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGAGACATCAACATGTGTaGAAGGGTGGTATTGGTAGC +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQARHQHV*KGGIGS
Trigger: GCTACCAATACCACCCTTCCACACATGTTGATGTCT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTCTGTTCACCGTCCCTaGCTGGATATGAGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQSVHRP*LDMRSK
Trigger: CTTGCTTCTCATATCCAGCCAGGGACGGTGAACAGA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTGCTGGGGCTAGGAAGTaGCGAGGACACTCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTAGARK*RGHSVH
Trigger: GTGAACAGAGTGTCCTCGCCACTTCCTAGCCCCAGC...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp CCCAGTCTCTTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCAAAGTTTGAAAGCATaGAGCGGGCAGATGTGGGTA +
Preference number: 4 (lower is better)
Translates to: PSLFNNSMTYKGEGWGCLQSLKA*SGQMWV
Trigger: TACCCACATCTGCCCGCTCCATGCTTTCAAACTTTG...CAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAAGAGACTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGATGGGGCAGTACAAGTaGAACAGGCGTTATTTCTGT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAMGQYK*NRRYFC
Trigger: ACAGAAATAACGCCTGTTCCACTTGTACTGCCCCAT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAAGCATGCGACAGAAGTTaGGGGAATGAAAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKACDRS*GNERGK
Trigger: CTTTCCTCTTTCATTCCCCCAACTTCTGTCGCATGC...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTTTGGGCTGGTTGGCCTaGAATAGACTTCCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTLGWLA*NRLPCS
Trigger: GGAACACGGAAGTCTATTCCAGGCCAACCAGCCCAA...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGAGCAGAGGTCCTAAGCTaGTTTTGCCATGAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRAEVLS*FCHELF
Trigger: AAACAGCTCATGGCAAAACCAGCTTAGGACCTCTGC...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGAGCCAGAGAGGCAGGTaGGTGTACACTATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQSQRGR*VYTMRR
Trigger: TCTTCTCATAGTGTACACCCACCTGCCTCTCTGGCT...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGCTGTGCAGATGGATGTaGCTCTCACTAGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQALCRWM*LSLGEI
Trigger: AATTTCACCTAGTGAGAGCCACATCCATCTGCACAG...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAGAAAAAGATTGGTTGAGTGGGGGAAGGTTTAACCGTCCACTGAACAAAGGGCTAAGGCTGTGCAGATaGATGTGGCTCTCACTAGGT +
Preference number: 4 (lower is better)
Translates to: KEKDWLSGGRFNRPLNKGLRLCR*MWLSLG
Trigger: ACCTAGTGAGAGCCACATCCATCTGCACAGCCTTAG...CCCTTTGTTCAGTGGACGGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGAAAGGAGACAAAATGTaGGCTGTGTCTGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQKGDKM*AVSALS
Trigger: GGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTT...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATACAAGTGATCAGGTGCTaGGATTACAGGCGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: FNNSMTYKGEGWGCLPLIQVIRC*DYRREP
Trigger: TGGCTCGCGCCTGTAATCCCAGCACCTGATCACTTG...TATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CCA 90 bp GGGGTGTTTGCCTTTGATAAGATCATTAAGAGACACAATAATCAAATGCAGCGTTGCAGGGCGCTTTCTTaGCTCACTGCAACCTCTGCG +
Preference number: 4 (lower is better)
Translates to: GVFAFDKIIKRHNNQMQRCRALS*LTATSA
Trigger: CGCAGAGGTTGCAGTGAGCCAAGAAAGCGCCCTGCA...ACGCTGCATTTGATTATTGTGTCTCTTAATGATCTTATCAAAGGCAAACACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTTTCTTCATAGCCCTTaGCACCACTGCCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQFLHSP*HHCHPV
Trigger: AACAGGATGGCAGTGGTGTCAAGGGCTATGAAGAAA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTTGGTCTCTTGTTTACTaGCACTGGACACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTWSLVY*HWTQLE
Trigger: CTCCAGCTGTGTCCAGTGTCAGTAAACAAGAGACCA...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATATGCCTGTGCAAAGTTTaGAAGCATGGAGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FNNSMTYKGEGWGCLPLICLCKV*KHGAGR
Trigger: TCTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCA...TATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR TCA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGATCAAGTATGCAATGTTaGCACCTGGCATACCAAGGA +
Preference number: 4 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRSSMQC*HLAYQG
Trigger: TCCTTGGTATGCCAGGTGTCAACATTGCATACTTGA...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATACTGTTAAAGAAAACTaGAGAGAGAAGACAGAGCGG +
Preference number: 4 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDTVKEN*REKTER
Trigger: CCGCTCTGTCTTCTCTCTTCAGTTTTCTTTAACAGT...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR TCA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTAAGAAAAAGATTGGTTaGGTGGGGGAAGGTTTAACC +
Preference number: 4 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPKKKIG*VGEGLT
Trigger: GGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTT...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGAAGAAAAAGATTGGTTaGGTGGGGGAAGGTTTAACC +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHEKKKIG*VGEGLT
Trigger: GGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTT...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACAATGCTCGTATCATTaGACTGAATGTCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: MVGTSTGTACDRSWGNERQCSYH*TECHLC
Trigger: ACACAAATGACATTCAGTTCAATGATACGAGCATTG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTCCCTGGCTCATAATTaGGCCCATCTTCATACCTCT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQSLAHN*AHLHTS
Trigger: AGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACCCTTTAAGTGCTCAATaGATTTGGGGTAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHPLSAQ*IWGKGG
Trigger: TCCTCCCTTACCCCAAATTCATTGAGCACTTAAAGG...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTATGCTCAGCAGCATCTaGAACAGATGGGAGTGTATT +
Preference number: 4 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGMLSSI*NRWECI
Trigger: AATACACTCCCATCTGTTTCAGATGCTGCTGAGCAT...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CCCAGTCTCTTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGTTAACAAACATTAACTaGGAGCCCATCCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PSLFNNSMTYKGEGWGCLLTNIN*EPILCQ
Trigger: CTGGCACAGGATGGGCTCTCAGTTAATGTTTGTTAA...CAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAAGAGACTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR GCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTAGCTCATCCCTCAGCTaGTTGATAAGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTSSSLS*LISCCR
Trigger: GCGGCAGCAGCTTATCAAGCAGCTGAGGGATGAGCT...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTCTGGGCTGGGTTTGGTaGAATAACACGTTGAGACAT +
Preference number: 4 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSLGWVW*NNTLRH
Trigger: ATGTCTCAACGTGTTATTGCACCAAACCCAGCCCAG...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp GACTCATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACATCAATTTCCTGTTCCTaGTGTAGGGCTTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: DSFMSTQLVGHPANSLGTSISCS*CRAFTN
Trigger: ATTTGTGAAAGCCCTACAGCAGGAACAGGAAATTGA...TGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAATGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGAGCCAGTATTCAAGTATaGAATGTTGACACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRASIQV*NVDTWH
Trigger: ATGCCAGGTGTCAACATTGCATACTTGAATACTGGC...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGCCAGTATTCAAGTATaGAATGTTGACACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAASIQV*NVDTWH
Trigger: ATGCCAGGTGTCAACATTGCATACTTGAATACTGGC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGACCCCTACTGCAATCTaGAATGCTCGTATCATTGAA +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQATPTAI*NARIIE
Trigger: TTCAATGATACGAGCATTGCAGATTGCAGTAGGGGT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAAGTGGGGGAAATCCCTTaGATAAGAAAGCTTGACACT +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKVGEIP*IRKLDT
Trigger: AGTGTCAAGCTTTCTTATGCAAGGGATTTCCCCCAC...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTTTTCAGACGTTCCATaGCCTCATGCCCCTCCATTT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQFSDVP*PHAPPF
Trigger: AAATGGAGGGGCATGAGGCCATGGAACGTCTGAAAA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGACAACTGGAGTCTTCTaGACCACATTCTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQATTGVF*TTFSFC
Trigger: ACAGAAAGAGAATGTGGTCCAGAAGACTCCAGTTGT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGTGCATTCTGTACAACTaGAGTCTTCTGGACCACATT +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVCILYN*SLLDHI
Trigger: AATGTGGTCCAGAAGACTCCAGTTGTACAGAATGCA...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACAGACATCAACATGTGTaGAAGGGTGGTATTGGTAGC +
Preference number: 4 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHRHQHV*KGGIGS
Trigger: GCTACCAATACCACCCTTCCACACATGTTGATGTCT...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGCAAGGTTCATATAGATaGCAGAGGATGTTGTACGCT +
Preference number: 4 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMQGSYR*QRMLYA
Trigger: AGCGTACAACATCCTCTGCCATCTATATGAACCTTG...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGCAAGGTTCATATAGATaGCAGAGGATGTTGTACGCT +
Preference number: 4 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVQGSYR*QRMLYA
Trigger: AGCGTACAACATCCTCTGCCATCTATATGAACCTTG...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCACAGCTTTTGCCTTaGCTGTCAATGACACTCTGT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQAQLLP*LSMTLC
Trigger: ACAGAGTGTCATTGACAGCCAAGGCAAAAGCTGTGC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGAGCCTTTTTCTGGTTaGAGGTCATACACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQEPFSG*RSYTAH
Trigger: GTGAGCAGTGTATGACCTCCAACCAGAAAAAGGCTC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCATGCGACAGAAGTTaGGGGAATGAAAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQACDRS*GNERGK
Trigger: CTTTCCTCTTTCATTCCCCCAACTTCTGTCGCATGC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTCTTCCCGTCTTCTATaGGTAAATTCCAGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQASSRLL*VNSRVV
Trigger: AACCACTCTGGAATTTACCCATAGAAGACGGGAAGA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAAAGTTTCAATCCTCCCTaGCTCATAATTGAGCCCATC +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKSFNPP*LIIEPI
Trigger: GATGGGCTCAATTATGAGCCAGGGAGGATTGAAACT...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGCACCTCCAAATTTTATaGGGAAGGTGTGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHEHLQIL*GRCAVH
Trigger: ATGAACTGCACACCTTCCCCATAAAATTTGGAGGTG...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp CATTGTCATACACATAACCACTTCAACGCGAGTCACTTTCAGTTCCTCCCTGGTCTGTGCAGATGGATGTaGCTCTCACTAGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: HCHTHNHFNASHFQFLPGLCRWM*LSLGEI
Trigger: AATTTCACCTAGTGAGAGCCACATCCATCTGCACAG...ACCAGGGAGGAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTAGGCAAAGATGTCACTaGTCTGATGCCCTGGACATG +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTRQRCH*SDALDM
Trigger: CATGTCCAGGGCATCAGACCAGTGACATCTTTGCCT...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGAACTAAAGCACCAACCTaGGGCATTCAATTGTCAACC +
Preference number: 4 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRTKAPT*GIQLST
Trigger: GGTTGACAATTGAATGCCCCAGGTTGGTGCTTTAGT...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp GGGGTGTTTGCCTTTGATAAGATCATTAAGAGACACAATAATCAAATGCAGCGTTGCACATCGCGTCTCTaGCTCTCCATCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GVFAFDKIIKRHNNQMQRCTSRL*LSISLS
Trigger: GGAGAGAGAGATGGAGAGCCAGAGACGCGATGTGCA...ACGCTGCATTTGATTATTGTGTCTCTTAATGATCTTATCAAAGGCAAACACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR TCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGAACGGATGACACTGTaGCCCTGTAATGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQERMTL*PCNVLK
Trigger: TTTGAGAACATTACAGGGTCACAGTGTCATCCGTTC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR TCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTACTGCGGTTGATAATTaGTGGCGGGATTCATGTTGG +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTTAVDN*WRDSCW
Trigger: CCAACATGAATCCCGCCATCAATTATCAACCGCAGT...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGACTTTTAATCTCAACTaGCAAACTTGGGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHETFNLN*QTWASR
Trigger: ACGAGATGCCCAAGTTTGTCAGTTGAGATTAAAAGT...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGACTTTTAATCTCAACTaGCAAACTTGGGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQATFNLN*QTWASR
Trigger: ACGAGATGCCCAAGTTTGTCAGTTGAGATTAAAAGT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTCTGGGCTGGGTTTGGTaGAATAACACGTTGAGACAT +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTLGWVW*NNTLRH
Trigger: ATGTCTCAACGTGTTATTGCACCAAACCCAGCCCAG...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATTTGGAGGTCATACACTaGTCACATAGAATCTTACCA +
Preference number: 4 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDLEVIH*SHRILP
Trigger: TGGTAAGATTCTATGTGAGCAGTGTATGACCTCCAA...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTCAATTTCCTGTTCCTaGTGTAGGGCTTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQASISCS*CRAFTN
Trigger: ATTTGTGAAAGCCCTACAGCAGGAACAGGAAATTGA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGAGCCAGTATTCAAGTATaGAATGTTGACACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRASIQV*NVDTWH
Trigger: ATGCCAGGTGTCAACATTGCATACTTGAATACTGGC...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGAAACAATTTATCCAGTaGTTTCAAAGCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAKQFIQ*FQSTEG
Trigger: GCCCTCTGTGCTTTGAAAGCACTGGATAAATTGTTT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AAAGAAAAAGATTGGTTGAGTGGGGGAAGGTTTAACCGTCCACTGAACAAAGGGAATGTGGGCTGTGTCTaGGCTCTCCTATTTTATCAC +
Preference number: 4 (lower is better)
Translates to: KEKDWLSGGRFNRPLNKGNVGCV*ALLFYH
Trigger: GTGATAAAATAGGAGAGCGCAGACACAGCCCACATT...CCCTTTGTTCAGTGGACGGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTTGCAATGTTGACACCTaGCATACCAAGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTCNVDT*HTKEAT
Trigger: GGTGGCCTCCTTGGTATGCCAGGTGTCAACATTGCA...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGGAAATAATTTTGGGCTaGTTGGCCTGGAATAGACTT +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHEEIILG*LAWNRL
Trigger: AAGTCTATTCCAGGCCAACCAGCCCAAAATTATTTC...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTATTCATAATAATACTTaGTTTCGATGCCCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPIHNNT*FRCPRE
Trigger: TTCCCGGGGGCATCGAAACCAAGTATTATTATGAAT...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGACTAAAGCACCAACCTaGGGCATTCAATTGTCAACC +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQTKAPT*GIQLST
Trigger: GGTTGACAATTGAATGCCCCAGGTTGGTGCTTTAGT...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTTGGGCAGGAGATGGCTaGACAATAGATGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTWAGDG*TIDAAF
Trigger: GAATGCAGCATCTATTGTTCAGCCATCTCCTGCCCA...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTTTTTCTTGCTTCCAGTaGGGGGTGAAATCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTFSCFQ*GVKSVR
Trigger: CCGCACAGATTTCACCCCTCACTGGAAGCAAGAAAA...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AAAGAAAAAGATTGGTTGAGTGGGGGAAGGTTTAACCGTCCACTGAACAAAGGGACTGTTAAAGAAAACTaGAGAGAGAAGACAGAGCGG +
Preference number: 4 (lower is better)
Translates to: KEKDWLSGGRFNRPLNKGTVKEN*REKTER
Trigger: CCGCTCTGTCTTCTCTCTTCAGTTTTCTTTAACAGT...CCCTTTGTTCAGTGGACGGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATCAATGCTCGTATCATTaGACTGAATGTCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDQCSYH*TECHLC
Trigger: ACACAAATGACATTCAGTTCAATGATACGAGCATTG...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTGGTGGGTGTACACTATaGGAAGAGCAGAAACCCGTA +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTGGCTL*EEQKPV
Trigger: TACGGGTTTCTGCTCTTCTCATAGTGTACACCCACC...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTCGTTCCATGGCCTCATaGCCCTCCATTTTGAGTCGC +
Preference number: 4 (lower is better)
Translates to: NRWECICLFENQFLLVLVRSMAS*PSILSR
Trigger: GCGACTCAAAATGGAGGGGCATGAGGCCATGGAACG...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AAAGAAAAAGATTGGTTGAGTGGGGGAAGGTTTAACCGTCCACTGAACAAAGGGTGGCTGAACAATAGATaGTGCATTCTGTACAACTGG +
Preference number: 4 (lower is better)
Translates to: KEKDWLSGGRFNRPLNKGWLNNR*CILYNW
Trigger: CCAGTTGTACAGAATGCAGCATCTATTGTTCAGCCA...CCCTTTGTTCAGTGGACGGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTGGCTGAACAATAGATaGTGCATTCTGTACAACTGG +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQWLNNR*CILYNW
Trigger: CCAGTTGTACAGAATGCAGCATCTATTGTTCAGCCA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAATTGGAGGTCATACACTaGTCACATAGAATCTTACCA +
Preference number: 4 (lower is better)
Translates to: EERRQNVGCVCALLFYHQLEVIH*SHRILP
Trigger: TGGTAAGATTCTATGTGAGCAGTGTATGACCTCCAA...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGCTTTGTGTCCTCCGATaGCAGTATTCAAGTATGCAA +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQLCVLR*QYSSMQ
Trigger: TTGCATACTTGAATACTGGCATCGGAGGACACAAAG...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTCTGTCACTGCTGAAATaGTCAGCAGCATCTGAAACA +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTLSLLK*SAASET
Trigger: TGTTTCAGATGCTGCTGAGCATTTCAGCAGTGACAG...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAGAAAAAGATTGGTTGAGTGGGGGAAGGTTTAACCGTCCACTGAACAAAGGGACAACTGGAGTCTTCTaGACCACATTCTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: KEKDWLSGGRFNRPLNKGTTGVF*TTFSFC
Trigger: ACAGAAAGAGAATGTGGTCCAGAAGACTCCAGTTGT...CCCTTTGTTCAGTGGACGGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGACAACTGGAGTCTTCTaGACCACATTCTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQTTGVF*TTFSFC
Trigger: ACAGAAAGAGAATGTGGTCCAGAAGACTCCAGTTGT...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AAAGAAAAAGATTGGTTGAGTGGGGGAAGGTTTAACCGTCCACTGAACAAAGGGTGCATTCTGTACAACTaGAGTCTTCTGGACCACATT +
Preference number: 4 (lower is better)
Translates to: KEKDWLSGGRFNRPLNKGCILYN*SLLDHI
Trigger: AATGTGGTCCAGAAGACTCCAGTTGTACAGAATGCA...CCCTTTGTTCAGTGGACGGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTGCATTCTGTACAACTaGAGTCTTCTGGACCACATT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQCILYN*SLLDHI
Trigger: AATGTGGTCCAGAAGACTCCAGTTGTACAGAATGCA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTTGGCGGGATTCATGTTaGGTGTTGTGGTGCGTACAA +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTWRDSC*VLWCVQ
Trigger: TTGTACGCACCACAACACCCAACATGAATCCCGCCA...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGCAAGGTTCATATAGATaGCAGAGGATGTTGTACGCT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQQGSYR*QRMLYA
Trigger: AGCGTACAACATCCTCTGCCATCTATATGAACCTTG...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGCATTTTTCAGCCGGTTaGTGTGTTCAGCTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQHFSAG*CVQLLE
Trigger: CTCTAAAAGCTGAACACACCAACCGGCTGAAAAATG...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTGTCCTACTTGGCAGCTaGGACCCCTACTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: NRWECICLFENQFLLVLVVLLGS*DPYCNL
Trigger: CAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGAC...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAGAAAAAGATTGGTTGAGTGGGGGAAGGTTTAACCGTCCACTGAACAAAGGGTCTTCCCGTCTTCTATaGGTAAATTCCAGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: KEKDWLSGGRFNRPLNKGSSRLL*VNSRVV
Trigger: AACCACTCTGGAATTTACCCATAGAAGACGGGAAGA...CCCTTTGTTCAGTGGACGGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAAGAAATAATTTTGGGCTaGTTGGCCTGGAATAGACTT +
Preference number: 4 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKEIILG*LAWNRL
Trigger: AAGTCTATTCCAGGCCAACCAGCCCAAAATTATTTC...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTAGCCAGAGAGGCAGGTaGGTGTACACTATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTSQRGR*VYTMRR
Trigger: TCTTCTCATAGTGTACACCCACCTGCCTCTCTGGCT...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTTCCATCACTAATCCCTaGGAAGAGTATGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSSITNP*EEYENG
Trigger: CCCATTTTCATACTCTTCCCAGGGATTAGTGATGGA...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGAATTCATAATAATACTTaGTTTCGATGCCCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRIHNNT*FRCPRE
Trigger: TTCCCGGGGGCATCGAAACCAAGTATTATTATGAAT...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CAA 72 bp TTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTaGACTCATTTATGTCCACCCAACTTGTGGGACACC +
Preference number: 4 (lower is better)
Translates to: FLSSKSISSCCH*THLCPPNLWDT
Trigger: GGTGTCCCACAAGTTGGGTGGACATAAATGAGTCAAGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp CCCAGTCTCTTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGTCTTCAACAATTCAATaGCATATAAGGGTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PSLFNNSMTYKGEGWGCLSSTIQ*HIRVRV
Trigger: AACCCTCACCCTTATATGTCATTGAATTGTTGAAGA...CAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAAGAGACTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGCTGAACAATAGATGCTaGATTCTGTACAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQLNNRC*ILYNWS
Trigger: ACTCCAGTTGTACAGAATGCAGCATCTATTGTTCAG...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTTGGAGGTCATACACTaGTCACATAGAATCTTACCA +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQLEVIH*SHRILP
Trigger: TGGTAAGATTCTATGTGAGCAGTGTATGACCTCCAA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTCAATTTCCTGTTCCTaGTGTAGGGCTTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQSISCS*CRAFTN
Trigger: ATTTGTGAAAGCCCTACAGCAGGAACAGGAAATTGA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR GCA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGAAGAATAGGCAAATATaGGAATCTCAACTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAKNRQI*ESQLLE
Trigger: TTCCAACAGTTGAGATTCGCATATTTGCCTATTCTT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGAGATGGGAGTGTATTTaGCTTTTTGAAAACCAGTTT +
Preference number: 4 (lower is better)
Translates to: QWEATICTAEVLSWFCHERWECI*LFENQF
Trigger: AAACTGGTTTTCAAAAAGGCAAATACACTCCCATCT...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTCAAAGTTTGAAAGCATaGAGCGGGCAGATGTGGGTA +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTQSLKA*SGQMWV
Trigger: TACCCACATCTGCCCGCTCCATGCTTTCAAACTTTG...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTGGTGCAATAACACGTTaGGACATCAACATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTGAITR*DINMCG
Trigger: TCCACACATGTTGATGTCTCAACGTGTTATTGCACC...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTGAGAGGGCTGCCTGCTaGTGTAATCGCTGTTCAATT +
Preference number: 4 (lower is better)
Translates to: NRWECICLFENQFLLVLVERAAC*CNRCSI
Trigger: AATTGAACAGCGATTACAGCAGCAGGCAGCCCTCTC...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAAAGATGGGAGTGTATTTaGCTTTTTGAAAACCAGTTT +
Preference number: 4 (lower is better)
Translates to: EERRQNVGCVCALLFYHQRWECI*LFENQF
Trigger: AAACTGGTTTTCAAAAAGGCAAATACACTCCCATCT...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTAGTTTCAATCCTCCCTaGCTCATAATTGAGCCCATC +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTSFNPP*LIIEPI
Trigger: GATGGGCTCAATTATGAGCCAGGGAGGATTGAAACT...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp GGGGTGTTTGCCTTTGATAAGATCATTAAGAGACACAATAATCAAATGCAGCGTTATAAGGGTGAGGGTTaGGGGTGTTTGCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: GVFAFDKIIKRHNNQMQRYKGEG*GCLPLI
Trigger: TATCAAAGGCAAACACCCCCAACCCTCACCCTTATA...ACGCTGCATTTGATTATTGTGTCTCTTAATGATCTTATCAAAGGCAAACACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR TCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTTTTCTTCATAGCCCTTaGCACCACTGCCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: NRWECICLFENQFLLVLVFLHSP*HHCHPV
Trigger: AACAGGATGGCAGTGGTGTCAAGGGCTATGAAGAAA...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTACTGCGGTTGATAATTaGTGGCGGGATTCATGTTGG +
Preference number: 4 (lower is better)
Translates to: NRWECICLFENQFLLVLVTAVDN*WRDSCW
Trigger: CCAACATGAATCCCGCCATCAATTATCAACCGCAGT...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR TCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTCCTCCTGTTGTCACTTaGCTCATTTATGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: NRWECICLFENQFLLVLVPPVVT*LIYVHP
Trigger: TGGGTGGACATAAATGAGTCAAGTGACAACAGGAGG...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTCTTTGTGTCCTCCGATaGCAGTATTCAAGTATGCAA +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTLCVLR*QYSSMQ
Trigger: TTGCATACTTGAATACTGGCATCGGAGGACACAAAG...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTTTCAGTACCAAACACTaGCACCCAAATTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: NRWECICLFENQFLLVLVFSTKH*HPNCPA
Trigger: GGCTGGACAATTTGGGTGGCAGTGTTTGGTACTGAA...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTCACCTCCAAATTTTATaGGGAAGGTGTGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTHLQIL*GRCAVH
Trigger: ATGAACTGCACACCTTCCCCATAAAATTTGGAGGTG...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTAAGAATAGGCAAATATaGGAATCTCAACTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTKNRQI*ESQLLE
Trigger: TTCCAACAGTTGAGATTCGCATATTTGCCTATTCTT...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR GCA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTAAACAATTTATCCAGTaGTTTCAAAGCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTKQFIQ*FQSTEG
Trigger: GCCCTCTGTGCTTTGAAAGCACTGGATAAATTGTTT...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CCA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTCATTTTTCAGCCGGTTaGTGTGTTCAGCTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: NRWECICLFENQFLLVLVHFSAG*CVQLLE
Trigger: CTCTAAAAGCTGAACACACCAACCGGCTGAAAAATG...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
3UTR CAA 72 bp AATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTaGCCTTTGATAAGATCATTAAGAGACACAATAATC +
Preference number: 4 (lower is better)
Translates to: NSMTYKGEGWGC*PLIRSLRDTII
Trigger: GATTATTGTGTCTCTTAATGATCTTATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS CCA 90 bp CACCTGGCACAGACAACTGGGGTGCCTGTGCAAAGTTTGAAAGCATaGAGCGGGCAGATGTGGGTATGCCACGCTGGAGGCTGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: HLAQTTGVPVQSLKA*SGQMWVCHAGGCSG
Trigger: CCCAGAGCAGCCTCCAGCGTGGCATACCCACATCTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCACCCCAGTTGTCTGTGCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634645.1
ENST00000637918.1
CDS CCA 90 bp CGGGCATCCTTGGCTGTGGCCCCTTCCTCCTGCACATCGCGTCTCTaGCTCTCCATCTCTCTCTCCTCTCCACCTTCCTCTTCCGCTTTT +
Preference number: 5 (lower is better)
Translates to: RASLAVAPSSCTSRL*LSISLSSPPSSSAF
Trigger: AAAAGCGGAAGAGGAAGGTGGAGAGGAGAGAGAGATGGAGAGCCAGAGACGCGATGTGCAGGAGGAAGGGGCCACAGCCAAGGATGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS TCA 90 bp AAGGAGGCCACCTGGCACAGACAACTGGGGTGCCTGTGCAAAGTTTaGAAGCATGGAGCGGGCAGATGTGGGTATGCCACGCTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: KEATWHRQLGCLCKV*KHGAGRCGYATLEA
Trigger: AGCCTCCAGCGTGGCATACCCACATCTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCACCCCAGTTGTCTGTGCCAGGTGGCCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634645.1
ENST00000637918.1
CDS-3UTR CAA 90 bp GCTGGTGACCCGGAGGGACTACTCCAGGGTGGGGAGGCAAGGCACAAATTAGGGGGCACAGCTTTTGCCTaGGCTGTCAATGACACTCTG +
Preference number: 5 (lower is better)
Translates to: AGDPEGLLQGGEARHKLGGTAFA*AVNDTL
Trigger: CAGAGTGTCATTGACAGCCAAGGCAAAAGCTGTGCC...CCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTCCGGGTCACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS GCA 90 bp GAAACGGGAAAGCTGTACCGGGCGCGCGAATGGCACCTGAACCTCTaGACTCGCATGAGTGGCTCGCTCCTCAATGTAATTGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ETGKLYRAREWHLNL*TRMSGSLLNVIESR
Trigger: CCTGCTCTCAATTACATTGAGGAGCGAGCCACTCATGCGAGTGCAGAGGTTCAGGTGCCATTCGCGCGCCCGGTACAGCTTTCCCGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634544.1
CDS CCA 90 bp TCCTCTTCCGCTTTTAAGGACCCTCATGATGACATTGGGCCCACCTaGCATACCAAGGAGGCCACCTGGCACAGACAACTGGGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: SSSAFKDPHDDIGPT*HTKEATWHRQLGCL
Trigger: CAGGCACCCCAGTTGTCTGTGCCAGGTGGCCTCCTTGGTATGCCAGGTGGGCCCAATGTCATCATGAGGGTCCTTAAAAGCGGAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CAA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGTTGAGGTTCAACCCCTaGGGCCCCAGGCCGAGAGGG +
Preference number: 5 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQLRFNP*GPRPRG
Trigger: CCCTCTCGGCCTGGGGCCCAAGGGGTTGAACCTCAA...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS GCA 90 bp ACACTGGACACAGCTGGAGCCGTAGTGGGGGAGAGGGCTGCCTGCTaGTGTAATCGCTGTTCAATTTCCTGTTGGGAGTCATCACATCAG +
Preference number: 5 (lower is better)
Translates to: TLDTAGAVVGERAAC*CNRCSISCWESSHQ
Trigger: CTGATGTGATGACTCCCAACAGGAAATTGAACAGCGATTACAGCAGCAGGCAGCCCTCTCCCCCACTACGGCTCCAGCTGTGTCCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634645.1
CDS GCA 90 bp CTGACACTGGACACAGCTGGAGCCGTAGTGGGGGAGAGGGCTGCCTaGTGCTGTAATCGCTGTTCAATTTCCTGTTGGGAGTCATCACAT +
Preference number: 5 (lower is better)
Translates to: LTLDTAGAVVGERAA*CCNRCSISCWESSH
Trigger: ATGTGATGACTCCCAACAGGAAATTGAACAGCGATTACAGCAGCAGGCAGCCCTCTCCCCCACTACGGCTCCAGCTGTGTCCAGTGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634645.1
CDS CCA 90 bp GGCGCTGGGGCTAGGAAGTGGCGAGGACACTCTGTTCACCGTCCCTaGCTGGATATGAGAAGCAAGGTTCATATAGATGGCAGAGGATGT +
Preference number: 5 (lower is better)
Translates to: GAGARKWRGHSVHRP*LDMRSKVHIDGRGC
Trigger: ACATCCTCTGCCATCTATATGAACCTTGCTTCTCATATCCAGCCAGGGACGGTGAACAGAGTGTCCTCGCCACTTCCTAGCCCCAGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
CDS CCA 90 bp CTATCCATCCTTTATGAAACGGGAAAGCTGTACCGGGCGCGCGAATaGCACCTGAACCTCTGCACTCGCATGAGTGGCTCGCTCCTCAAT +
Preference number: 5 (lower is better)
Translates to: LSILYETGKLYRARE*HLNLCTRMSGSLLN
Trigger: ATTGAGGAGCGAGCCACTCATGCGAGTGCAGAGGTTCAGGTGCCATTCGCGCGCCCGGTACAGCTTTCCCGTTTCATAAAGGATGGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTTGAGGTTCAACCCCTaGGGCCCCAGGCCGAGAGGG +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQALRFNP*GPRPRG
Trigger: CCCTCTCGGCCTGGGGCCCAAGGGGTTGAACCTCAA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATGCTGCAGCCTGTGAGTaGGCAGCATCAGTCATGGCG +
Preference number: 5 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYAAACE*AASVMA
Trigger: CGCCATGACTGATGCTGCCAACTCACAGGCTGCAGC...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGACCCAGCAAACAGCCTaGGAACAGCCGTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGTQQTA*EQPFLC
Trigger: ACAGAGGAACGGCTGTTCCAAGGCTGTTTGCTGGGT...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS GCA 90 bp TTTCAGACGTTCCATGGCCTCATGCCCCTCCATTTTGAGTCGCTTTaGCAGGACATCATCTCGCTCATCTGCTGGGTCCAAGCTCCGCTT +
Preference number: 5 (lower is better)
Translates to: FQTFHGLMPLHFESL*QDIISLICWVQAPL
Trigger: AAGCGGAGCTTGGACCCAGCAGATGAGCGAGATGATGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATGAGGCCATGGAACGTCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS-3UTR CAA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGATTGAGGTTCAACCCCTaGGGCCCCAGGCCGAGAGGG +
Preference number: 5 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRLRFNP*GPRPRG
Trigger: CCCTCTCGGCCTGGGGCCCAAGGGGTTGAACCTCAA...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS GCA 90 bp CCCCTCCATTTTGAGTCGCTTTGCCAGGACATCATCTCGCTCATCTaGTGGGTCCAAGCTCCGCTTCAACAGATTCAAGCGAAGAGCATC +
Preference number: 5 (lower is better)
Translates to: PLHFESLCQDIISLI*WVQAPLQQIQAKSI
Trigger: GATGCTCTTCGCTTGAATCTGTTGAAGCGGAGCTTGGACCCAGCAGATGAGCGAGATGATGTCCTGGCAAAGCGACTCAAAATGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS GCA 90 bp AACAGGACCAGTCGGGCTTCTTCCAATCGTAGCTCATCCCTCAGCTaGTTGATAAGCTGCTGCCGCTCCTCAATGCCTTTCCCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: NRTSRASSNRSSSLS*LISCCRSSMPFPLN
Trigger: GTTTAAGGGGAAAGGCATTGAGGAGCGGCAGCAGCTTATCAAGCAGCTGAGGGATGAGCTACGATTGGAAGAAGCCCGACTGGTCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACCACTGCCATCCTGTTaGGTGGGTAACTCATGTGGC +
Preference number: 5 (lower is better)
Translates to: MVGTSTGTACDRSWGNERPLPSC*VGNSCG
Trigger: GCCACATGAGTTACCCACCAAACAGGATGGCAGTGG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGGCTGCAGCCTGTGAGTaGGCAGCATCAGTCATGGCG +
Preference number: 5 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVAAACE*AASVMA
Trigger: CGCCATGACTGATGCTGCCAACTCACAGGCTGCAGC...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATGTGCCTGTGCAAAGTTaGAAAGCATGGAGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYVPVQS*KAWSGQ
Trigger: CTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCAC...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACTAGTCATGTCCTACTaGGCAGCTGGGACCCCTACT +
Preference number: 5 (lower is better)
Translates to: MVGTSTGTACDRSWGNERLVMSY*AAGTPT
Trigger: AGTAGGGGTCCCAGCTGCCAAGTAGGACATGACTAG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGCTAGTCATGTCCTACTaGGCAGCTGGGACCCCTACT +
Preference number: 5 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQLVMSY*AAGTPT
Trigger: AGTAGGGGTCCCAGCTGCCAAGTAGGACATGACTAG...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGACCCAGCAAACAGCCTaGGAACAGCCGTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQTQQTA*EQPFLC
Trigger: ACAGAGGAACGGCTGTTCCAAGGCTGTTTGCTGGGT...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS TCA 90 bp GGAAGCTTAGATAGGCCCTGCTGTCCCACATGGGCAGGAGATGGCTaGACAATAGATGCTGCATTCTGTACAACTGGAGTCTTCTGGACC +
Preference number: 5 (lower is better)
Translates to: GSLDRPCCPTWAGDG*TIDAAFCTTGVFWT
Trigger: GGTCCAGAAGACTCCAGTTGTACAGAATGCAGCATCTATTGTTCAGCCATCTCCTGCCCATGTGGGACAGCAGGGCCTATCTAAGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGATCATGCCCCTCCATTTaGAGTCGCTTTGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: MVGTSTGTACDRSWGNERSCPSI*SRFART
Trigger: TGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATGA...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAATCATGCCCCTCCATTTaGAGTCGCTTTGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: CMVGTSTGTACDRSWGNESCPSI*SRFART
Trigger: TGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATGA...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGAGATTCATGTTGGGTGTaGTGGTGCGTACAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: MVGTSTGTACDRSWGNERDSCWV*WCVQGQ
Trigger: CTGGCCTTGTACGCACCACAACACCCAACATGAATC...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAGATTCATGTTGGGTGTaGTGGTGCGTACAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEDSCWV*WCVQGQ
Trigger: CTGGCCTTGTACGCACCACAACACCCAACATGAATC...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGAATGGCGGGATTCATGTaGGGTGTTGTGGTGCGTACA +
Preference number: 5 (lower is better)
Translates to: MVGTSTGTACDRSWGNERMAGFM*GVVVRT
Trigger: TGTACGCACCACAACACCCAACATGAATCCCGCCAT...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGGGCACAGCTTTTGCCTaGGCTGTCAATGACACTCTG +
Preference number: 5 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQGTAFA*AVNDTL
Trigger: CAGAGTGTCATTGACAGCCAAGGCAAAAGCTGTGCC...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGGTGGGAAGCAACTATTaGTACAGCAGAGGTCCTAAG +
Preference number: 5 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGVGSNY*YSRGPK
Trigger: CTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCAC...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGATCAAACCTCAGCGGTaGAACAAAGGGTCACCGAGC +
Preference number: 5 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWIKPQR*NKGSPS
Trigger: GCTCGGTGACCCTTTGTTCAACCGCTGAGGTTTGAT...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGAATCAAACCTCAGCGGTaGAACAAAGGGTCACCGAGC +
Preference number: 5 (lower is better)
Translates to: MVGTSTGTACDRSWGNERIKPQR*NKGSPS
Trigger: GCTCGGTGACCCTTTGTTCAACCGCTGAGGTTTGAT...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATACCTGGGGCATTCAATaGTCAACCACCCTTAAGGGC +
Preference number: 5 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYTWGIQ*STTLKG
Trigger: GCCCTTAAGGGTGGTTGACAATTGAATGCCCCAGGT...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGTTGTGCAAAAGGGTCTaGTTCCCCTCCCACCCACCC +
Preference number: 5 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVLCKRV*FPSHPP
Trigger: GGGTGGGTGGGAGGGGAACAAGACCCTTTTGCACAA...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp TTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATAAGAGGCCGGGCATCCTaGGCTGTGGCCCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: FNNSMTYKGEGWGCLPLIRGRAS*AVAPSS
Trigger: GGAGGAAGGGGCCACAGCCAAGGATGCCCGGCCTCT...TATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS GCA 90 bp GCCCTGCTGTCCCACATGGGCAGGAGATGGCTGAACAATAGATGCTaGATTCTGTACAACTGGAGTCTTCTGGACCACATTCTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: ALLSHMGRRWLNNRC*ILYNWSLLDHILFL
Trigger: CAGAAAGAGAATGTGGTCCAGAAGACTCCAGTTGTACAGAATGCAGCATCTATTGTTCAGCCATCTCCTGCCCATGTGGGACAGCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS CCA 90 bp CTCCATTTTGAGTCGCTTTGCCAGGACATCATCTCGCTCATCTGCTaGGTCCAAGCTCCGCTTCAACAGATTCAAGCGAAGAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: LHFESLCQDIISLIC*VQAPLQQIQAKSIF
Trigger: GAAGATGCTCTTCGCTTGAATCTGTTGAAGCGGAGCTTGGACCCAGCAGATGAGCGAGATGATGTCCTGGCAAAGCGACTCAAAATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS-3UTR CAA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCCACTGCCATCCTGTTaGGTGGGTAACTCATGTGGC +
Preference number: 5 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPPLPSC*VGNSCG
Trigger: GCCACATGAGTTACCCACCAAACAGGATGGCAGTGG...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAATGTGGAAGGGTGGTATaGGTAGCTGAACGGATGACA +
Preference number: 5 (lower is better)
Translates to: CMVGTSTGTACDRSWGNECGRVV*VAERMT
Trigger: TGTCATCCGTTCAGCTACCAATACCACCCTTCCACA...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGTGGTGCAATAACACGTaGAGACATCAACATGTGTGG +
Preference number: 5 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGWCNNT*RHQHVW
Trigger: CCACACATGTTGATGTCTCAACGTGTTATTGCACCA...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCTGCAGCCTGTGAGTaGGCAGCATCAGTCATGGCG +
Preference number: 5 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQAAACE*AASVMA
Trigger: CGCCATGACTGATGCTGCCAACTCACAGGCTGCAGC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGGTGCCTGTGCAAAGTTaGAAAGCATGGAGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMVPVQS*KAWSGQ
Trigger: CTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCAC...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGTGCCTGTGCAAAGTTaGAAAGCATGGAGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAVPVQS*KAWSGQ
Trigger: CTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCAC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGTTCAAGTATGCAATGTaGACACCTGGCATACCAAGG +
Preference number: 5 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGFKYAM*TPGIPR
Trigger: CCTTGGTATGCCAGGTGTCAACATTGCATACTTGAA...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGTTATGTCCACCCAACTaGTGGGACACCCAGCAAACA +
Preference number: 5 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWLCPPN*WDTQQT
Trigger: TGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAA...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTATGAGCTGTTTGGCTTaGAGCAGTTGGTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRMSCLA*SSWFCS
Trigger: GCTGCAGAACCAACTGCTCAAAGCCAAACAGCTCAT...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ACACACATCGGAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGCCCAGCCAGACGGTATaGCACATTCTCTGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: THIGGLRFSPGPHSDLYQPSQTV*HILCSL
Trigger: TAAGGAACAGAGAATGTGCAATACCGTCTGGCTGGG...CTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS GCA 90 bp GGGCAGTACAAGTGGAACAGGCGTTATTTCTGTCCACTGATGGACTaGGATATAGACCGGGGAGGGATCATGTCTAAAAGGTATTCACGC +
Preference number: 5 (lower is better)
Translates to: GQYKWNRRYFCPLMD*DIDRGGIMSKRYSR
Trigger: GCGTGAATACCTTTTAGACATGATCCCTCCCCGGTCTATATCGCAGTCCATCAGTGGACAGAAATAACGCCTGTTCCACTTGTACTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGATCATGCCCCTCCATTTaGAGTCGCTTTGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRSCPSI*SRFART
Trigger: TGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATGA...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTCATGCCCCTCCATTTaGAGTCGCTTTGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQASCPSI*SRFART
Trigger: TGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATGA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGACCACTGCCATCCTGTTaGGTGGGTAACTCATGTGGC +
Preference number: 5 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRPLPSC*VGNSCG
Trigger: GCCACATGAGTTACCCACCAAACAGGATGGCAGTGG...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ATTTATGTCCACCCAACTTGTGGGACACCCAGCAAACAGCCTTGGAACAGCCGTTCATTGATGTTTTCTTaGCCTGGCCTTCCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: IYVHPTCGTPSKQPWNSRSLMFS*PGLPAV
Trigger: GACTGCTGGAAGGCCAGGCAAAGAAAACATCAATGA...ACGGCTGTTCCAAGGCTGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGATCATTGATGTTTTCTTaGCCTGGCCTTCCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: MVGTSTGTACDRSWGNERSLMFS*PGLPAV
Trigger: GACTGCTGGAAGGCCAGGCAAAGAAAACATCAATGA...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTGATTCATGTTGGGTGTaGTGGTGCGTACAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPDSCWV*WCVQGQ
Trigger: CTGGCCTTGTACGCACCACAACACCCAACATGAATC...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTTGCGAAGAGCCAATTaGGCTGCAGCCTGTGAGTTG +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQALRRAN*AAACEL
Trigger: CAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCAA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGATTGCGAAGAGCCAATTaGGCTGCAGCCTGTGAGTTG +
Preference number: 5 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRLRRAN*AAACEL
Trigger: CAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCAA...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGGTCTTTTCCAGCTGTTaGCGAAGAGCCAATTTGGCT +
Preference number: 5 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWVFSSC*RRANLA
Trigger: AGCCAAATTGGCTCTTCGCAAACAGCTGGAAAAGAC...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGGGCACAGCTTTTGCCTaGGCTGTCAATGACACTCTG +
Preference number: 5 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVGTAFA*AVNDTL
Trigger: CAGAGTGTCATTGACAGCCAAGGCAAAAGCTGTGCC...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGGCACAGCTTTTGCCTaGGCTGTCAATGACACTCTG +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAGTAFA*AVNDTL
Trigger: CAGAGTGTCATTGACAGCCAAGGCAAAAGCTGTGCC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGAAGAGCCTTTTTCTGGTaGGAGGTCATACACTGCTCA +
Preference number: 5 (lower is better)
Translates to: MVGTSTGTACDRSWGNERRAFFW*EVIHCS
Trigger: TGAGCAGTGTATGACCTCCAACCAGAAAAAGGCTCT...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGACCTGGGGCATTCAATaGTCAACCACCCTTAAGGGC +
Preference number: 5 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMTWGIQ*STTLKG
Trigger: GCCCTTAAGGGTGGTTGACAATTGAATGCCCCAGGT...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AAAGAAAAAGATTGGTTGAGTGGGGGAAGGTTTAACCGTCCACTGAACAAAGGGTTGTGCAAAAGGGTCTaGTTCCCCTCCCACCCACCC +
Preference number: 5 (lower is better)
Translates to: KEKDWLSGGRFNRPLNKGLCKRV*FPSHPP
Trigger: GGGTGGGTGGGAGGGGAACAAGACCCTTTTGCACAA...CCCTTTGTTCAGTGGACGGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGCCACTGCCATCCTGTTaGGTGGGTAACTCATGTGGC +
Preference number: 5 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQPLPSC*VGNSCG
Trigger: GCCACATGAGTTACCCACCAAACAGGATGGCAGTGG...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp AAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATAAAGGGGAGGTGGGGACTGGAAGCCTCATaGTCAGACAAAACAATGATG +
Preference number: 5 (lower is better)
Translates to: KTERQKNRSQQCEIKGRWGLEAS*SDKTMM
Trigger: CATCATTGTTTTGTCTGACAATGAGGCTTCCAGTCC...CCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTGTGGAAGGGTGGTATaGGTAGCTGAACGGATGACA +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQACGRVV*VAERMT
Trigger: TGTCATCCGTTCAGCTACCAATACCACCCTTCCACA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATAGATGGCAGAGGATGTaGTACGCTGACATGGAACAG +
Preference number: 5 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDRWQRM*YADMEQ
Trigger: CTGTTCCATGTCAGCGTACAACATCCTCTGCCATCT...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGAGATGGCAGAGGATGTaGTACGCTGACATGGAACAG +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQARWQRM*YADMEQ
Trigger: CTGTTCCATGTCAGCGTACAACATCCTCTGCCATCT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATTGCGAAGAGCCAATTaGGCTGCAGCCTGTGAGTTG +
Preference number: 5 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKLRRAN*AAACEL
Trigger: CAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCAA...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGAGTGAGGCACAGCTTTaGCCTTGGCTGTCAATGACA +
Preference number: 5 (lower is better)
Translates to: QWEATICTAEVLSWFCHESEAQL*PWLSMT
Trigger: TGTCATTGACAGCCAAGGCAAAAGCTGTGCCTCACT...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGAGTGAGGCACAGCTTTaGCCTTGGCTGTCAATGACA +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQASEAQL*PWLSMT
Trigger: TGTCATTGACAGCCAAGGCAAAAGCTGTGCCTCACT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAACTTACCATTCTTTTCTaGCTTCCAGTGAGGGGTGAA +
Preference number: 5 (lower is better)
Translates to: CMVGTSTGTACDRSWGNELTILF*LPVRGE
Trigger: TTCACCCCTCACTGGAAGCAAGAAAAGAATGGTAAG...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGTGCCTGTGCAAAGTTaGAAAGCATGGAGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQVPVQS*KAWSGQ
Trigger: CTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCAC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGATTTGGCTTTGAGCAGTaGGTTCTGCAGCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRFGFEQ*VLQLVQ
Trigger: CTGCACCAGCTGCAGAACCAACTGCTCAAAGCCAAA...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS CCA 90 bp TGTTCACCGTCCCTGGCTGGATATGAGAAGCAAGGTTCATATAGATaGCAGAGGATGTTGTACGCTGACATGGAACAGAAGAACTTGACG +
Preference number: 5 (lower is better)
Translates to: CSPSLAGYEKQGSYR*QRMLYADMEQKNLT
Trigger: CGTCAAGTTCTTCTGTTCCATGTCAGCGTACAACATCCTCTGCCATCTATATGAACCTTGCTTCTCATATCCAGCCAGGGACGGTGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634564.1
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTCATTGATGTTTTCTTaGCCTGGCCTTCCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQASLMFS*PGLPAV
Trigger: GACTGCTGGAAGGCCAGGCAAAGAAAACATCAATGA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp TTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGTTAAACATCTCTAAGTaGGCTGCTTTGAGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: FPCMVGTSTGTACDRSWGLNISK*AALSLS
Trigger: AGAAAGACTCAAAGCAGCCAACTTAGAGATGTTTAA...CCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATGTGGAAGGGTGGTATaGGTAGCTGAACGGATGACA +
Preference number: 5 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKCGRVV*VAERMT
Trigger: TGTCATCCGTTCAGCTACCAATACCACCCTTCCACA...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTATGGCGGGATTCATGTaGGGTGTTGTGGTGCGTACA +
Preference number: 5 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSMAGFM*GVVVRT
Trigger: TGTACGCACCACAACACCCAACATGAATCCCGCCAT...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTTGCGAAGAGCCAATTaGGCTGCAGCCTGTGAGTTG +
Preference number: 5 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQLRRAN*AAACEL
Trigger: CAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCAA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGGTCTTTTCCAGCTGTTaGCGAAGAGCCAATTTGGCT +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAVFSSC*RRANLA
Trigger: AGCCAAATTGGCTCTTCGCAAACAGCTGGAAAAGAC...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAAAGTGAGGCACAGCTTTaGCCTTGGCTGTCAATGACA +
Preference number: 5 (lower is better)
Translates to: EERRQNVGCVCALLFYHQSEAQL*PWLSMT
Trigger: TGTCATTGACAGCCAAGGCAAAAGCTGTGCCTCACT...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAAAGTGAGGCACAGCTTTaGCCTTGGCTGTCAATGACA +
Preference number: 5 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKSEAQL*PWLSMT
Trigger: TGTCATTGACAGCCAAGGCAAAAGCTGTGCCTCACT...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGAGAGCCTTTTTCTGGTaGGAGGTCATACACTGCTCA +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQARAFFW*EVIHCS
Trigger: TGAGCAGTGTATGACCTCCAACCAGAAAAAGGCTCT...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGATAATTTTGGGCTGGTaGGCCTGGAATAGACTTCCG +
Preference number: 5 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMIILGW*AWNRLP
Trigger: CGGAAGTCTATTCCAGGCCAACCAGCCCAAAATTAT...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AGTCATGTCCTACTTGGCAGCTGGGACCCCTACTGCAATCTGCAATGCTCGTATCAAGATGAAATAATTTaGGGCTGGTTGGCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: SHVLLGSWDPYCNLQCSYQDEII*GWLAWN
Trigger: ATTCCAGGCCAACCAGCCCAAAATTATTTCATCTTG...ATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAAGACAAGATGAAATAATTTaGGGCTGGTTGGCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: MVGTSTGTACDRSWGNERQDEII*GWLAWN
Trigger: ATTCCAGGCCAACCAGCCCAAAATTATTTCATCTTG...TCTTTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AAGAAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGTCCTCCTGTTGTCACTaGACTCATTTATGTCCACCC +
Preference number: 5 (lower is better)
Translates to: KKTEERRQSGRRTDRSSVSSCCH*THLCPP
Trigger: GGGTGGACATAAATGAGTCAAGTGACAACAGGAGGA...CACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTTTTGGCTTTGAGCAGTaGGTTCTGCAGCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSFGFEQ*VLQLVQ
Trigger: CTGCACCAGCTGCAGAACCAACTGCTCAAAGCCAAA...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp TTGGAACAGCCGTTCCTCTGTATTATAGATGGGGCTATGGTTAGAGGGGATAGAATGAGCTGTTTGGCTTaGAGCAGTTGGTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LEQPFLCIIDGAMVRGDRMSCLA*SSWFCS
Trigger: GCTGCAGAACCAACTGCTCAAAGCCAAACAGCTCAT...TCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp TTCAACAATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATAATGCAGCGCCCTGGATaGAACATCAGAGACGGAGCC +
Preference number: 5 (lower is better)
Translates to: FNNSMTYKGEGWGCLPLIMQRPG*NIRDGA
Trigger: GGCTCCGTCTCTGATGTTCAATCCAGGGCGCTGCAT...TATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATTGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CAA 90 bp AATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATAAGATCATGGGGTTTTGCCCTGTaGCCCAGGCTGACCTCAAGT +
Preference number: 5 (lower is better)
Translates to: NSMTYKGEGWGCLPLIRSWGFAL*PRLTSS
Trigger: ACTTGAGGTCAGCCTGGGCAACAGGGCAAAACCCCA...TGATCTTATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS TCA 90 bp TTCTGTACAACTGGAGTCTTCTGGACCACATTCTCTTTCTGTAGCTaGCTCTGTCTCAGTTTCTTTAACAGGACCAGTCGGGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: FCTTGVFWTTFSFCS*LCLSFFNRTSRASS
Trigger: GGAAGAAGCCCGACTGGTCCTGTTAAAGAAACTGAGACAGAGTCAGCTACAGAAAGAGAATGTGGTCCAGAAGACTCCAGTTGTACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS CCA 90 bp TGTTCACCGTCCCTGGCTGGATATGAGAAGCAAGGTTCATATAGATaGCAGAGGATGTTGTACGCTGACATGGAACAGAAGAACTTGACT +
Preference number: 5 (lower is better)
Translates to: CSPSLAGYEKQGSYR*QRMLYADMEQKNLT
Trigger: AGTCAAGTTCTTCTGTTCCATGTCAGCGTACAACATCCTCTGCCATCTATATGAACCTTGCTTCTCATATCCAGCCAGGGACGGTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATGGACTGGAAGCCTCATaGTCAGACAAAACAATGATG +
Preference number: 5 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDGLEAS*SDKTMM
Trigger: CATCATTGTTTTGTCTGACAATGAGGCTTCCAGTCC...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTGTGGAAGGGTGGTATaGGTAGCTGAACGGATGACA +
Preference number: 5 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQCGRVV*VAERMT
Trigger: TGTCATCCGTTCAGCTACCAATACCACCCTTCCACA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATTGGTGCAATAACACGTaGAGACATCAACATGTGTGG +
Preference number: 5 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDWCNNT*RHQHVW
Trigger: CCACACATGTTGATGTCTCAACGTGTTATTGCACCA...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp GAGGAAAGGAGACAAAATGTGGGCTGTGTCTGCGCTCTCCTATTTTATCACCAAGTCTTTTCCAGCTGTTaGCGAAGAGCCAATTTGGCT +
Preference number: 5 (lower is better)
Translates to: EERRQNVGCVCALLFYHQVFSSC*RRANLA
Trigger: AGCCAAATTGGCTCTTCGCAAACAGCTGGAAAAGAC...TTGGTGATAAAATAGGAGAGCGCAGACACAGCCCACATTTTGTCTCCTTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAAGTCTTTTCCAGCTGTTaGCGAAGAGCCAATTTGGCT +
Preference number: 5 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKVFSSC*RRANLA
Trigger: AGCCAAATTGGCTCTTCGCAAACAGCTGGAAAAGAC...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp GAGGGCTTAGATTCTCCCCAGGACCTCATTCTGACCTCTATCAGAGGTAAAGATCTTACCATTCTTTTCTaGCTTCCAGTGAGGGGTGAA +
Preference number: 5 (lower is better)
Translates to: EGLDSPQDLILTSIRGKDLTILF*LPVRGE
Trigger: TTCACCCCTCACTGGAAGCAAGAAAAGAATGGTAAG...ATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp CAGTGGGAAGCAACTATTTGTACAGCAGAGGTCCTAAGCTGGTTTTGCCATGAGTCTCATGATGGTCTCTaGTTTACTGACACTGGACAC +
Preference number: 5 (lower is better)
Translates to: QWEATICTAEVLSWFCHESHDGL*FTDTGH
Trigger: GTGTCCAGTGTCAGTAAACAAGAGACCATCATGAGA...CTCATGGCAAAACCAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp TTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGATCTCATGATGGTCTCTaGTTTACTGACACTGGACAC +
Preference number: 5 (lower is better)
Translates to: FSVLLSVYGRHQYRHCMRSHDGL*FTDTGH
Trigger: GTGTCCAGTGTCAGTAAACAAGAGACCATCATGAGA...TCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTTCAAGTATGCAATGTaGACACCTGGCATACCAAGG +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQAFKYAM*TPGIPR
Trigger: CCTTGGTATGCCAGGTGTCAACATTGCATACTTGAA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAGAAAAAGATTGGTTGAGTGGGGGAAGGTTTAACCGTCCACTGAACAAAGGGTTATGTCCACCCAACTaGTGGGACACCCAGCAAACA +
Preference number: 5 (lower is better)
Translates to: KEKDWLSGGRFNRPLNKGLCPPN*WDTQQT
Trigger: TGTTTGCTGGGTGTCCCACAAGTTGGGTGGACATAA...CCCTTTGTTCAGTGGACGGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTCCTCCTGTTGTCACTaGACTCATTTATGTCCACCC +
Preference number: 5 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHSSCCH*THLCPP
Trigger: GGGTGGACATAAATGAGTCAAGTGACAACAGGAGGA...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp TGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTTGGGGGAATGAAGTCTATTTCCTCCTGTaGTCACTTGACTCATTTATG +
Preference number: 5 (lower is better)
Translates to: CMVGTSTGTACDRSWGNEVYFLL*SLDSFM
Trigger: CATAAATGAGTCAAGTGACAACAGGAGGAAATAGAC...TTCATTCCCCCAACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS TCA 90 bp ATACACTGCTCACATAGAATCTTACCATTCTTTTCTTGCTTCCAGTaGGGGGTGAAATCTGTGCGGCACTGGGCACATACAAAGGGTTCA +
Preference number: 5 (lower is better)
Translates to: IHCSHRILPFFSCFQ*GVKSVRHWAHTKGS
Trigger: TGAACCCTTTGTATGTGCCCAGTGCCGCACAGATTTCACCCCTCACTGGAAGCAAGAAAAGAATGGTAAGATTCTATGTGAGCAGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
CDS-3UTR CAA 90 bp CAGCGGTTGAACAAAGGGTCACCGAGCTATACTAGTCAAGAAGCAGCTTCTATGGCCAAATCCTTCCTTTaGAGCAATGCCAACATTTTC +
Preference number: 5 (lower is better)
Translates to: QRLNKGSPSYTSQEAASMAKSFL*SNANIF
Trigger: GAAAATGTTGGCATTGCTCAAAAGGAAGGATTTGGC...CATAGAAGCTGCTTCTTGACTAGTATAGCTCGGTGACCCTTTGTTCAACCGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTCATTGATGTTTTCTTaGCCTGGCCTTCCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQSLMFS*PGLPAV
Trigger: GACTGCTGGAAGGCCAGGCAAAGAAAACATCAATGA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAAGGACTGGAAGCCTCATaGTCAGACAAAACAATGATG +
Preference number: 5 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKGLEAS*SDKTMM
Trigger: CATCATTGTTTTGTCTGACAATGAGGCTTCCAGTCC...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AAAGAAAAAGATTGGTTGAGTGGGGGAAGGTTTAACCGTCCACTGAACAAAGGGAGAGCCTTTTTCTGGTaGGAGGTCATACACTGCTCA +
Preference number: 5 (lower is better)
Translates to: KEKDWLSGGRFNRPLNKGRAFFW*EVIHCS
Trigger: TGAGCAGTGTATGACCTCCAACCAGAAAAAGGCTCT...CCCTTTGTTCAGTGGACGGTTAAACCTTCCCCCACTCAACCAATCTTTTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp GTCTTCTGTTTTTCTGTTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTCTCATGATGGTCTCTaGTTTACTGACACTGGACAC +
Preference number: 5 (lower is better)
Translates to: VFCFSVLLSVYGRHQYRHSHDGL*FTDTGH
Trigger: GTGTCCAGTGTCAGTAAACAAGAGACCATCATGAGA...GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp GGGGTGTTTGCCTTTGATAAGATCATTAAGAGACACAATAATCAAATGCAGCGTGTGCCTGTGCAAAGTTaGAAAGCATGGAGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: GVFAFDKIIKRHNNQMQRVPVQS*KAWSGQ
Trigger: CTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCAC...ACGCTGCATTTGATTATTGTGTCTCTTAATGATCTTATCAAAGGCAAACACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CAA 90 bp TTTTGCTTTCCGTGTATGGTAGGCACCAGTACAGGCACTGCATGCGACAGAAGTGTCTATTTCCTCCTGTaGTCACTTGACTCATTTATG +
Preference number: 5 (lower is better)
Translates to: FCFPCMVGTSTGTACDRSVYFLL*SLDSFM
Trigger: CATAAATGAGTCAAGTGACAACAGGAGGAAATAGAC...ACTTCTGTCGCATGCAGTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGGACTGGAAGCCTCATaGTCAGACAAAACAATGATG +
Preference number: 5 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQGLEAS*SDKTMM
Trigger: CATCATTGTTTTGTCTGACAATGAGGCTTCCAGTCC...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp CCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTCTTTCTTGGTGCAATAACACGTaGAGACATCAACATGTGTGG +
Preference number: 5 (lower is better)
Translates to: PSFNPPWLIIEPIFIPLSWCNNT*RHQHVW
Trigger: CCACACATGTTGATGTCTCAACGTGTTATTGCACCA...AGAAAGAGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTGGTGCAATAACACGTaGAGACATCAACATGTGTGG +
Preference number: 5 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQWCNNT*RHQHVW
Trigger: CCACACATGTTGATGTCTCAACGTGTTATTGCACCA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGCTTACCATTCTTTTCTaGCTTCCAGTGAGGGGTGAA +
Preference number: 5 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQLTILF*LPVRGE
Trigger: TTCACCCCTCACTGGAAGCAAGAAAAGAATGGTAAG...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTAGAGCCTTTTTCTGGTaGGAGGTCATACACTGCTCA +
Preference number: 5 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTRAFFW*EVIHCS
Trigger: TGAGCAGTGTATGACCTCCAACCAGAAAAAGGCTCT...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ATGAAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGTCTCATGATGGTCTCTaGTTTACTGACACTGGACAC +
Preference number: 5 (lower is better)
Translates to: MKEERDKGFKDGAVQVEQSHDGL*FTDTGH
Trigger: GTGTCCAGTGTCAGTAAACAAGAGACCATCATGAGA...CTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTATAATTTTGGGCTGGTaGGCCTGGAATAGACTTCCG +
Preference number: 5 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTIILGW*AWNRLP
Trigger: CGGAAGTCTATTCCAGGCCAACCAGCCCAAAATTAT...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp GCAGGACCTAGTTTCAATCCTCCCTGGCTCATAATTGAGCCCATCTTCATACCTTTAAACATCTCTAAGTaGGCTGCTTTGAGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: AGPSFNPPWLIIEPIFIPLNISK*AALSLS
Trigger: AGAAAGACTCAAAGCAGCCAACTTAGAGATGTTTAA...AGGTATGAAGATGGGCTCAATTATGAGCCAGGGAGGATTGAAACTAGGTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AAAGAGGAAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTGGAACAGGCGTTAAACATCTCTAAGTaGGCTGCTTTGAGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: KEERDKGFKDGAVQVEQALNISK*AALSLS
Trigger: AGAAAGACTCAAAGCAGCCAACTTAGAGATGTTTAA...CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS-3UTR CAA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTAGATGGCAGAGGATGTaGTACGCTGACATGGAACAG +
Preference number: 5 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTRWQRM*YADMEQ
Trigger: CTGTTCCATGTCAGCGTACAACATCCTCTGCCATCT...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp ACTTGGTGGCCAGATGATCCCCCTCTTCACTTCACAGATAAGAAAATTGATACTTTCAAGTATGCAATGTaGACACCTGGCATACCAAGG +
Preference number: 5 (lower is better)
Translates to: TWWPDDPPLHFTDKKIDTFKYAM*TPGIPR
Trigger: CCTTGGTATGCCAGGTGTCAACATTGCATACTTGAA...AGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS TCA 90 bp TCTGTCATTCTATCCATCCTTATGGGACTACCATTACGTGAGGCATaGCTGTATATCCTTGGACTCAGCAATCAGATCAGTATTAGAACC +
Preference number: 5 (lower is better)
Translates to: SVILSILMGLPLREA*LYILGLSNQISIRT
Trigger: GGTTCTAATACTGATCTGATTGCTGAGTCCAAGGATATACAGTCATGCCTCACGTAATGGTAGTCCCATAAGGATGGATAGAATGACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634791.1
CDS-3UTR CAA 90 bp AAAACTGAAGAGAGAAGACAGAGCGGCAGAAGAACAGATCGCAGCAGTGTGAAATTAAACATCTCTAAGTaGGCTGCTTTGAGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: KTEERRQSGRRTDRSSVKLNISK*AALSLS
Trigger: AGAAAGACTCAAAGCAGCCAACTTAGAGATGTTTAA...TTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS-3UTR CAA 90 bp AACAGATGGGAGTGTATTTGCCTTTTTGAAAACCAGTTTCTATTGGTCTTAGTTATGGCGGGATTCATGTaGGGTGTTGTGGTGCGTACA +
Preference number: 5 (lower is better)
Translates to: NRWECICLFENQFLLVLVMAGFM*GVVVRT
Trigger: TGTACGCACCACAACACCCAACATGAATCCCGCCAT...AACTAAGACCAATAGAAACTGGTTTTCAAAAAGGCAAATACACTCCCATCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp TGTTGGAAGAGAAATCCTTTCTTTCGTCTAAGTCTATTTCCTCCTGTTGTCACTGTGGGAAGCAACTATTaGTACAGCAGAGGTCCTAAG +
Preference number: 5 (lower is better)
Translates to: CWKRNPFFRLSLFPPVVTVGSNY*YSRGPK
Trigger: CTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCAC...AGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTCTCTTCCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368655.5
ENST00000576342.2
CDS-3UTR CAA 90 bp AATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATAAGATCAGAGGGTTGGGGGTGTTaGCCTTTGATAAGATCATTA +
Preference number: 5 (lower is better)
Translates to: NSMTYKGEGWGCLPLIRSEGWGC*PLIRSL
Trigger: TAATGATCTTATCAAAGGCAAACACCCCCAACCCTC...TGATCTTATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS-3UTR CAA 90 bp AATTCAATGACATATAAGGGTGAGGGTTGGGGGTGTTTGCCTTTGATAAGATCATGGGGGTGTTTGCCTTaGATAAGATCATTAAGAGAC +
Preference number: 5 (lower is better)
Translates to: NSMTYKGEGWGCLPLIRSWGCLP*IRSLRD
Trigger: GTCTCTTAATGATCTTATCAAAGGCAAACACCCCCA...TGATCTTATCAAAGGCAAACACCCCCAACCCTCACCCTTATATGTCATTGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS GCA 72 bp TGGAGCGGGCAGATGTGGGTATGCCACGCTGGAGGCTaGTCTGGGGCTGTGGAGCCTGCCGAAGCGTATGAT +
Preference number: 6 (lower is better)
Translates to: WSGQMWVCHAGG*SGAVEPAEAYD
Trigger: ATCATACGCTTCGGCAGGCTCCACAGCCCCAGAGCAGCCTCCAGCGTGGCATACCCACATCTGCCCGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634645.1
ENST00000637918.1
CDS GCA 72 bp AGAGGCCGGGCATCCTTGGCTGTGGCCCCTTCCTCCTaGACATCGCGTCTCTGGCTCTCCATCTCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: RGRASLAVAPSS*TSRLWLSISLS
Trigger: GGAGAGAGAGATGGAGAGCCAGAGACGCGATGTGCAGGAGGAAGGGGCCACAGCCAAGGATGCCCGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS TCA 72 bp GTGGTGCGTACAAGGCCAGGCTTAGGCGGGCCCCGCTaGCCCTGTAGCTGGGCTGGGTTTGGTGCAATAACA +
Preference number: 6 (lower is better)
Translates to: VVRTRPGLGGPR*PCSWAGFGAIT
Trigger: TGTTATTGCACCAAACCCAGCCCAGCTACAGGGTCAGCGGGGCCCGCCTAAGCCTGGCCTTGTACGCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
ENST00000634564.1
CDS CCA 72 bp GTTGGCAGCATCAGTCATGGCGCTGGGGCTAGGAAGTaGCGAGGACACTCTGTTCACCGTCCCTGGCTGGAT +
Preference number: 6 (lower is better)
Translates to: VGSISHGAGARK*RGHSVHRPWLD
Trigger: ATCCAGCCAGGGACGGTGAACAGAGTGTCCTCGCCACTTCCTAGCCCCAGCGCCATGACTGATGCTGCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
CDS CCA 72 bp CTTTTCCGGTTTCTAGAGGCCGGGCATCCTTGGCTGTaGCCCCTTCCTCCTGCACATCGCGTCTCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: LFRFLEAGHPWL*PLPPAHRVSGS
Trigger: AGAGCCAGAGACGCGATGTGCAGGAGGAAGGGGCCACAGCCAAGGATGCCCGGCCTCTAGAAACCGGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS CAA 90 bp CAAGGAGGCCACCTGGCACAGACAACTGGGGTGCCTGTGCAAAGTTaGAAAGCATGGAGCGGGCAGATGTGGGTATGCCACGCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: QGGHLAQTTGVPVQS*KAWSGQMWVCHAGG
Trigger: GCCTCCAGCGTGGCATACCCACATCTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCACCCCAGTTGTCTGTGCCAGGTGGCCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634645.1
ENST00000637918.1
CDS GCA 72 bp CAAAGTTTGAAAGCATGGAGCGGGCAGATGTGGGTATaGCACGCTGGAGGCTGCTCTGGGGCTGTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: QSLKAWSGQMWV*HAGGCSGAVEP
Trigger: AGGCTCCACAGCCCCAGAGCAGCCTCCAGCGTGGCATACCCACATCTGCCCGCTCCATGCTTTCAAACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634645.1
ENST00000637918.1
CDS CCA 72 bp TTGGCTGTGGCCCCTTCCTCCTGCACATCGCGTCTCTaGCTCTCCATCTCTCTCTCCTCTCCACCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: LAVAPSSCTSRL*LSISLSSPPSS
Trigger: AGAGGAAGGTGGAGAGGAGAGAGAGATGGAGAGCCAGAGACGCGATGTGCAGGAGGAAGGGGCCACAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS CAA 90 bp GGGGTAGACACGCATGAAAGCCGGTGTGAAATGCAGCGCCCTGGATaGAACATCAGAGACGGAGCCCACAGGAGTCGTGCGTTTCCTGCG +
Preference number: 6 (lower is better)
Translates to: GVDTHESRCEMQRPG*NIRDGAHRSRAFPA
Trigger: CGCAGGAAACGCACGACTCCTGTGGGCTCCGTCTCTGATGTTCAATCCAGGGCGCTGCATTTCACACCGGCTTTCATGCGTGTCTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS TCA 72 bp CGCATGAAAGCCGGTGTGAAATGCAGCGCCCTGGATTaGACATCAGAGACGGAGCCCACAGGAGTCGTGCGT +
Preference number: 6 (lower is better)
Translates to: RMKAGVKCSALD*TSETEPTGVVR
Trigger: ACGCACGACTCCTGTGGGCTCCGTCTCTGATGTTCAATCCAGGGCGCTGCATTTCACACCGGCTTTCATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS GCA 72 bp GACACAGCTGGAGCCGTAGTGGGGGAGAGGGCTGCCTaGTGCTGTAATCGCTGTTCAATTTCCTGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: DTAGAVVGERAA*CCNRCSISCSC
Trigger: GCAGGAACAGGAAATTGAACAGCGATTACAGCAGCAGGCAGCCCTCTCCCCCACTACGGCTCCAGCTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
CDS GCA 72 bp GACACAGCTGGAGCCGTAGTGGGGGAGAGGGCTGCCTaGTGCTGTAATCGCTGTTCAATTTCCTGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: DTAGAVVGERAA*CCNRCSISCWE
Trigger: CTCCCAACAGGAAATTGAACAGCGATTACAGCAGCAGGCAGCCCTCTCCCCCACTACGGCTCCAGCTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634645.1
CDS CCA 72 bp CATGATGGTCTCTTGTTTACTGACACTGGACACAGCTaGAGCCGTAGTGGGGGAGAGGGCTGCCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: HDGLLFTDTGHS*SRSGGEGCLLL
Trigger: CAGCAGCAGGCAGCCCTCTCCCCCACTACGGCTCCAGCTGTGTCCAGTGTCAGTAAACAAGAGACCATCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
ENST00000634645.1
CDS CCA 72 bp CAGACAACTGGGGTGCCTGTGCAAAGTTTGAAAGCATaGAGCGGGCAGATGTGGGTATGCCACGCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: QTTGVPVQSLKA*SGQMWVCHAGG
Trigger: GCCTCCAGCGTGGCATACCCACATCTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCACCCCAGTTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634645.1
ENST00000637918.1
CDS CCA 72 bp CTTTATGAAACGGGAAAGCTGTACCGGGCGCGCGAATaGCACCTGAACCTCTGCACTCGCATGAGTGGCTCG +
Preference number: 6 (lower is better)
Translates to: LYETGKLYRARE*HLNLCTRMSGS
Trigger: CGAGCCACTCATGCGAGTGCAGAGGTTCAGGTGCCATTCGCGCGCCCGGTACAGCTTTCCCGTTTCATAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634544.1
CDS CAA 72 bp ACGCATGAAAGCCGGTGTGAAATGCAGCGCCCTGGATaGAACATCAGAGACGGAGCCCACAGGAGTCGTGCG +
Preference number: 6 (lower is better)
Translates to: THESRCEMQRPG*NIRDGAHRSRA
Trigger: CGCACGACTCCTGTGGGCTCCGTCTCTGATGTTCAATCCAGGGCGCTGCATTTCACACCGGCTTTCATGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS CAA 90 bp GGGCTGTGGAGCCTGCCGAAGCGTATGATGTCTCATGATGGTCTCTaGTTTACTGACACTGGACACAGCTGGAGCCGTAGTGGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: GLWSLPKRMMSHDGL*FTDTGHSWSRSGGE
Trigger: CTCTCCCCCACTACGGCTCCAGCTGTGTCCAGTGTCAGTAAACAAGAGACCATCATGAGACATCATACGCTTCGGCAGGCTCCACAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634645.1
CDS TCA 72 bp ACCTGGCACAGACAACTGGGGTGCCTGTGCAAAGTTTaGAAGCATGGAGCGGGCAGATGTGGGTATGCCACG +
Preference number: 6 (lower is better)
Translates to: TWHRQLGCLCKV*KHGAGRCGYAT
Trigger: CGTGGCATACCCACATCTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCACCCCAGTTGTCTGTGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634645.1
ENST00000637918.1
CDS GCA 72 bp AAGCTGTACCGGGCGCGCGAATGGCACCTGAACCTCTaGACTCGCATGAGTGGCTCGCTCCTCAATGTAATT +
Preference number: 6 (lower is better)
Translates to: KLYRAREWHLNL*TRMSGSLLNVI
Trigger: AATTACATTGAGGAGCGAGCCACTCATGCGAGTGCAGAGGTTCAGGTGCCATTCGCGCGCCCGGTACAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634544.1
CDS CAA 72 bp CACCTGGCACAGACAACTGGGGTGCCTGTGCAAAGTTaGAAAGCATGGAGCGGGCAGATGTGGGTATGCCAC +
Preference number: 6 (lower is better)
Translates to: HLAQTTGVPVQS*KAWSGQMWVCH
Trigger: GTGGCATACCCACATCTGCCCGCTCCATGCTTTCAAACTTTGCACAGGCACCCCAGTTGTCTGTGCCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634645.1
ENST00000637918.1
CDS CCA 72 bp GCTTTTAAGGACCCTCATGATGACATTGGGCCCACCTaGCATACCAAGGAGGCCACCTGGCACAGACAACTG +
Preference number: 6 (lower is better)
Translates to: AFKDPHDDIGPT*HTKEATWHRQL
Trigger: CAGTTGTCTGTGCCAGGTGGCCTCCTTGGTATGCCAGGTGGGCCCAATGTCATCATGAGGGTCCTTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637918.1
CDS CAA 72 bp TGTTTGCGAAGAGCCAATTTGGCTGCAGCCTGTGAGTaGGCAGCATCAGTCATGGCGCTGGGGCTAGGAAGT +
Preference number: 6 (lower is better)
Translates to: CLRRANLAAACE*AASVMALGLGS
Trigger: ACTTCCTAGCCCCAGCGCCATGACTGATGCTGCCAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
CDS CAA 72 bp GGGGGTGGGATCTCCAGGAGTGTCTTTTCCAGCTGTTaGCGAAGAGCCAATTTGGCTGCAGCCTGTGAGTTG +
Preference number: 6 (lower is better)
Translates to: GGGISRSVFSSC*RRANLAAACEL
Trigger: CAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCAAACAGCTGGAAAAGACACTCCTGGAGATCCCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
CDS CAA 90 bp GGAGGTTTAGGGGGTGGGATCTCCAGGAGTGTCTTTTCCAGCTGTTaGCGAAGAGCCAATTTGGCTGCAGCCTGTGAGTTGGCAGCATCA +
Preference number: 6 (lower is better)
Translates to: GGLGGGISRSVFSSC*RRANLAAACELAAS
Trigger: TGATGCTGCCAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCAAACAGCTGGAAAAGACACTCCTGGAGATCCCACCCCCTAAACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
CDS TCA 72 bp CTGCACTCGCATGAGTGGCTCGCTCCTCAATGTAATTaGGAGCAGGGAGGCCAAAAGTACTCTAAGTCCCGG +
Preference number: 6 (lower is better)
Translates to: LHSHEWLAPQCN*EQGGQKYSKSR
Trigger: CCGGGACTTAGAGTACTTTTGGCCTCCCTGCTCTCAATTACATTGAGGAGCGAGCCACTCATGCGAGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634544.1
CDS GCA 72 bp TTCCATGGCCTCATGCCCCTCCATTTTGAGTCGCTTTaGCAGGACATCATCTCGCTCATCTGCTGGGTCCAA +
Preference number: 6 (lower is better)
Translates to: FHGLMPLHFESL*QDIISLICWVQ
Trigger: TTGGACCCAGCAGATGAGCGAGATGATGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATGAGGCCATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS GCA 72 bp AGTCGGGCTTCTTCCAATCGTAGCTCATCCCTCAGCTaGTTGATAAGCTGCTGCCGCTCCTCAATGCCTTTC +
Preference number: 6 (lower is better)
Translates to: SRASSNRSSSLS*LISCCRSSMPF
Trigger: GAAAGGCATTGAGGAGCGGCAGCAGCTTATCAAGCAGCTGAGGGATGAGCTACGATTGGAAGAAGCCCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
CDS CCA 72 bp GAGTCGCTTTGCCAGGACATCATCTCGCTCATCTGCTaGGTCCAAGCTCCGCTTCAACAGATTCAAGCGAAG +
Preference number: 6 (lower is better)
Translates to: ESLCQDIISLIC*VQAPLQQIQAK
Trigger: CTTCGCTTGAATCTGTTGAAGCGGAGCTTGGACCCAGCAGATGAGCGAGATGATGTCCTGGCAAAGCGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS CAA 90 bp AGGACCAGTCGGGCTTCTTCCAATCGTAGCTCATCCCTCAGCTGCTaGATAAGCTGCTGCCGCTCCTCAATGCCTTTCCCCTTAAACATC +
Preference number: 6 (lower is better)
Translates to: RTSRASSNRSSSLSC*ISCCRSSMPFPLNI
Trigger: GATGTTTAAGGGGAAAGGCATTGAGGAGCGGCAGCAGCTTATCAAGCAGCTGAGGGATGAGCTACGATTGGAAGAAGCCCGACTGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
CDS TCA 72 bp GATAGGCCCTGCTGTCCCACATGGGCAGGAGATGGCTaGACAATAGATGCTGCATTCTGTACAACTGGAGTC +
Preference number: 6 (lower is better)
Translates to: DRPCCPTWAGDG*TIDAAFCTTGV
Trigger: GACTCCAGTTGTACAGAATGCAGCATCTATTGTTCAGCCATCTCCTGCCCATGTGGGACAGCAGGGCCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS TCA 72 bp GCACTGGGCACATACAAAGGGTTCAACCCGCAGAAGTaGGGCACAGCTTTTGCCTTGGCTGTCAATGACACT +
Preference number: 6 (lower is better)
Translates to: ALGTYKGFNPQK*GTAFALAVNDT
Trigger: AGTGTCATTGACAGCCAAGGCAAAAGCTGTGCCTCACTTCTGCGGGTTGAACCCTTTGTATGTGCCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
CDS CCA 72 bp GCTAGGAAGTGGCGAGGACACTCTGTTCACCGTCCCTaGCTGGATATGAGAAGCAAGGTTCATATAGATGGC +
Preference number: 6 (lower is better)
Translates to: ARKWRGHSVHRP*LDMRSKVHIDG
Trigger: GCCATCTATATGAACCTTGCTTCTCATATCCAGCCAGGGACGGTGAACAGAGTGTCCTCGCCACTTCCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
CDS CAA 90 bp AATGCCAACATTTTCAGACGTTCCATGGCCTCATGCCCCTCCATTTaGAGTCGCTTTGCCAGGACATCATCTCGCTCATCTGCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: NANIFRRSMASCPSI*SRFARTSSRSSAGS
Trigger: GGACCCAGCAGATGAGCGAGATGATGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATGAGGCCATGGAACGTCTGAAAATGTTGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS CAA 90 bp CGCTCTGGCTCACTCCGTCTAGCACTCATATCCACAGGCTCATCATaGATGTTTTCTTTGCCTGGCCTTCCAGCAGTCCTGTTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: RSGSLRLALISTGSS*MFSLPGLPAVLLSP
Trigger: TGGAGACAACAGGACTGCTGGAAGGCCAGGCAAAGAAAACATCAATGATGAGCCTGTGGATATGAGTGCTAGACGGAGTGAGCCAGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS GCA 72 bp TCCAATCGTAGCTCATCCCTCAGCTGCTTGATAAGCTaGTGCCGCTCCTCAATGCCTTTCCCCTTAAACATC +
Preference number: 6 (lower is better)
Translates to: SNRSSSLSCLIS*CRSSMPFPLNI
Trigger: GATGTTTAAGGGGAAAGGCATTGAGGAGCGGCAGCAGCTTATCAAGCAGCTGAGGGATGAGCTACGATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
CDS CCA 72 bp GCTGCCTGCTGCTGTAATCGCTGTTCAATTTCCTGTTaGGAGTCATCACATCAGGTGATTGAGCAGGACAGC +
Preference number: 6 (lower is better)
Translates to: AACCCNRCSISC*ESSHQVIEQDS
Trigger: GCTGTCCTGCTCAATCACCTGATGTGATGACTCCCAACAGGAAATTGAACAGCGATTACAGCAGCAGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634645.1
CDS CAA 72 bp AGCCTGCCGAAGCGTATGATGTCTCATGATGGTCTCTaGTTTACTGACACTGGACACAGCTGGAGCCGTAGT +
Preference number: 6 (lower is better)
Translates to: SLPKRMMSHDGL*FTDTGHSWSRS
Trigger: ACTACGGCTCCAGCTGTGTCCAGTGTCAGTAAACAAGAGACCATCATGAGACATCATACGCTTCGGCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
ENST00000634645.1
CDS TCA 72 bp CCCTGTAGCTGGGCTGGGTTTGGTGCAATAACACGTTaGGACATCAACATGTGTGGAAGGGTGGTATTGGTA +
Preference number: 6 (lower is better)
Translates to: PCSWAGFGAITR*DINMCGRVVLV
Trigger: TACCAATACCACCCTTCCACACATGTTGATGTCTCAACGTGTTATTGCACCAAACCCAGCCCAGCTACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
CDS GCA 72 bp AGCAATGCCAACATTTTCAGACGTTCCATGGCCTCATaGCCCTCCATTTTGAGTCGCTTTGCCAGGACATCA +
Preference number: 6 (lower is better)
Translates to: SNANIFRRSMAS*PSILSRFARTS
Trigger: TGATGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATGAGGCCATGGAACGTCTGAAAATGTTGGCATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS CCA 72 bp TGTCTAAAAGGTATTCACGCTGTCGGTCTGCCAAACTaGGGCCTTTGTGTCCTCCGATGCCAGTATTCAAGT +
Preference number: 6 (lower is better)
Translates to: CLKGIHAVGLPN*GLCVLRCQYSS
Trigger: ACTTGAATACTGGCATCGGAGGACACAAAGGCCCCAGTTTGGCAGACCGACAGCGTGAATACCTTTTAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS CAA 72 bp ATTTTCAGACGTTCCATGGCCTCATGCCCCTCCATTTaGAGTCGCTTTGCCAGGACATCATCTCGCTCATCT +
Preference number: 6 (lower is better)
Translates to: IFRRSMASCPSI*SRFARTSSRSS
Trigger: AGATGAGCGAGATGATGTCCTGGCAAAGCGACTCAAAATGGAGGGGCATGAGGCCATGGAACGTCTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS CAA 90 bp GTGGGTAACTCATGTGGCACCTCAAGATTTGCCAAATCCTTCCTTTaGAGCAATGCCAACATTTTCAGACGTTCCATGGCCTCATGCCCC +
Preference number: 6 (lower is better)
Translates to: VGNSCGTSRFAKSFL*SNANIFRRSMASCP
Trigger: GGGGCATGAGGCCATGGAACGTCTGAAAATGTTGGCATTGCTCAAAAGGAAGGATTTGGCAAATCTTGAGGTGCCACATGAGTTACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS GCA 72 bp TCCCACATGGGCAGGAGATGGCTGAACAATAGATGCTaGATTCTGTACAACTGGAGTCTTCTGGACCACATT +
Preference number: 6 (lower is better)
Translates to: SHMGRRWLNNRC*ILYNWSLLDHI
Trigger: AATGTGGTCCAGAAGACTCCAGTTGTACAGAATGCAGCATCTATTGTTCAGCCATCTCCTGCCCATGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS GCA 72 bp AAGTGGAACAGGCGTTATTTCTGTCCACTGATGGACTaGGATATAGACCGGGGAGGGATCATGTCTAAAAGG +
Preference number: 6 (lower is better)
Translates to: KWNRRYFCPLMD*DIDRGGIMSKR
Trigger: CCTTTTAGACATGATCCCTCCCCGGTCTATATCGCAGTCCATCAGTGGACAGAAATAACGCCTGTTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS CAA 72 bp TCCATTCTGGAACTGGAACGGGGACTGGAAGCCTCATaGTCAGACAAAACAATGATGTCTGGTGAGGGAGTT +
Preference number: 6 (lower is better)
Translates to: SILELERGLEAS*SDKTMMSGEGV
Trigger: AACTCCCTCACCAGACATCATTGTTTTGTCTGACAATGAGGCTTCCAGTCCCCGTTCCAGTTCCAGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS CAA 90 bp ATGTCTAAAAGGTATTCACGCTGTCGGTCTGCCAAACTGGGGCCTTaGTGTCCTCCGATGCCAGTATTCAAGTATGCAATGTTGACACCT +
Preference number: 6 (lower is better)
Translates to: MSKRYSRCRSAKLGP*CPPMPVFKYAMLTP
Trigger: AGGTGTCAACATTGCATACTTGAATACTGGCATCGGAGGACACAAAGGCCCCAGTTTGGCAGACCGACAGCGTGAATACCTTTTAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS CAA 90 bp CTGGCTGGATATGAGAAGCAAGGTTCATATAGATGGCAGAGGATGTaGTACGCTGACATGGAACAGAAGAACTTGACTGAAGGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LAGYEKQGSYRWQRM*YADMEQKNLTEGQA
Trigger: AGCCTGGCCTTCAGTCAAGTTCTTCTGTTCCATGTCAGCGTACAACATCCTCTGCCATCTATATGAACCTTGCTTCTCATATCCAGCCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634408.1
CDS TCA 72 bp GCTGTTCAATTTCCTGTTGGGAGTCATCACATCAGGTaGTTGAGCAGGACAGCACCCAATACCCAATTTCCT +
Preference number: 6 (lower is better)
Translates to: AVQFPVGSHHIR*LSRTAPNTQFP
Trigger: AGGAAATTGGGTATTGGGTGCTGTCCTGCTCAATCACCTGATGTGATGACTCCCAACAGGAAATTGAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634645.1
CDS CCA 72 bp TCCCTGGCTGGATATGAGAAGCAAGGTTCATATAGATaGCAGAGGATGTTGTACGCTGACATGGAACAGAAG +
Preference number: 6 (lower is better)
Translates to: SLAGYEKQGSYR*QRMLYADMEQK
Trigger: CTTCTGTTCCATGTCAGCGTACAACATCCTCTGCCATCTATATGAACCTTGCTTCTCATATCCAGCCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
ENST00000634564.1
CDS CCA 72 bp AAAGGGATAAAGGATTCAAGGATGGGGCAGTACAAGTaGAACAGGCGTTATTTCTGTCCACTGATGGACTGC +
Preference number: 6 (lower is better)
Translates to: KGIKDSRMGQYK*NRRYFCPLMDC
Trigger: GCAGTCCATCAGTGGACAGAAATAACGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634408.1
ENST00000634544.1
CDS TCA 72 bp CATGTGGCACCTCAAGATTTGCCAAATCCTTCCTTTTaGGCAATGCCAACATTTTCAGACGTTCCATGGCCT +
Preference number: 6 (lower is better)
Translates to: HVAPQDLPNPSF*AMPTFSDVPWP
Trigger: AGGCCATGGAACGTCTGAAAATGTTGGCATTGCTCAAAAGGAAGGATTTGGCAAATCTTGAGGTGCCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS CAA 72 bp TCATGTGGCACCTCAAGATTTGCCAAATCCTTCCTTTaGAGCAATGCCAACATTTTCAGACGTTCCATGGCC +
Preference number: 6 (lower is better)
Translates to: SCGTSRFAKSFL*SNANIFRRSMA
Trigger: GGCCATGGAACGTCTGAAAATGTTGGCATTGCTCAAAAGGAAGGATTTGGCAAATCTTGAGGTGCCACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634401.1
ENST00000634408.1
ENST00000634544.1
ENST00000634791.1
CDS CAA 90 bp CTGGCTGGATATGAGAAGCAAGGTTCATATAGATGGCAGAGGATGTaGTACGCTGACATGGAACAGAAGAACTTGACTGCGGTTGATAAT +
Preference number: 6 (lower is better)
Translates to: LAGYEKQGSYRWQRM*YADMEQKNLTAVDN
Trigger: ATTATCAACCGCAGTCAAGTTCTTCTGTTCCATGTCAGCGTACAACATCCTCTGCCATCTATATGAACCTTGCTTCTCATATCCAGCCAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368655.5
ENST00000576342.2
ENST00000634544.1
CDS CCA 72 bp AGCGAAGAGCATCTTCTGTCATTCTATCCATCCTTATaGGACTACCATTACGTGAGGCATGACTGTATATCC +
Preference number: 6 (lower is better)
Translates to: SEEHLLSFYPSL*DYHYVRHDCIS
Trigger: GGATATACAGTCATGCCTCACGTAATGGTAGTCCCATAAGGATGGATAGAATGACAGAAGATGCTCTTCGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634791.1
CDS CAA 90 bp CCATCCTTATGGGACTACCATTACGTGAGGCATGACTGTATATCCTaGGACTCAGCAATCAGATCAGTATTAGAACCATTACAAACGCTG +
Preference number: 6 (lower is better)
Translates to: PSLWDYHYVRHDCIS*DSAIRSVLEPLQTL
Trigger: CAGCGTTTGTAATGGTTCTAATACTGATCTGATTGCTGAGTCCAAGGATATACAGTCATGCCTCACGTAATGGTAGTCCCATAAGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634791.1
CDS TCA 72 bp TGTCATTCTATCCATCCTTATGGGACTACCATTACGTaGGGCATGACTGTATATCCTTGGACTCAGCAATCA +
Preference number: 6 (lower is better)
Translates to: CHSIHPYGTTIT*GMTVYPWTQQS
Trigger: TGATTGCTGAGTCCAAGGATATACAGTCATGCCTCACGTAATGGTAGTCCCATAAGGATGGATAGAATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634791.1
CDS TCA 72 bp TCATTCTATCCATCCTGCCTTAACATCTCCATTCCCTaGAAACAGTATGACCCTGCTGATGTAGCTGTGTTT +
Preference number: 6 (lower is better)
Translates to: SFYPSCLNISIP*KQYDPADVAVF
Trigger: AAACACAGCTACATCAGCAGGGTCATACTGTTTTCAGGGAATGGAGATGTTAAGGCAGGATGGATAGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636014.1
CDS TCA 72 bp TTCAATTTCCTGTTGGGAGTCATCACATCAGGTGATTaGGCAGGACAGCACCCAATACCCAATTTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: FNFLLGVITSGD*AGQHPIPNFLF
Trigger: AAAAAGGAAATTGGGTATTGGGTGCTGTCCTGCTCAATCACCTGATGTGATGACTCCCAACAGGAAATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634645.1
CDS CAA 72 bp TGGGACTACCATTACGTGAGGCATGACTGTATATCCTaGGACTCAGCAATCAGATCAGTATTAGAACCATTA +
Preference number: 6 (lower is better)
Translates to: WDYHYVRHDCIS*DSAIRSVLEPL
Trigger: TAATGGTTCTAATACTGATCTGATTGCTGAGTCCAAGGATATACAGTCATGCCTCACGTAATGGTAGTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634791.1