RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GATAD2A (Homo sapiens)

Ensembl gene IDs: ENSG00000167491

Ensembl transcript IDs: ENST00000358713.7, ENST00000360315.7, ENST00000404158.5, ENST00000417582.6, ENST00000418032.3, ENST00000429242.7, ENST00000432704.5, ENST00000444839.1, ENST00000473184.1, ENST00000494516.6, ENST00000609040.5, ENST00000683918.1

Found 1271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTaGCGGCAGGGGCTGAACAAGGGGGCCAGGAGCAGAACCAGCCCC +
Preference number: 1 (lower is better)
Translates to: GLAHAHHSVQGEPPV*RQGLNKGARSRTSP
Trigger: GGGGCTGGTTCTGCTCCTGGCCCCCTTGTTCAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR GCA 90 bp GCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTaGATCTGTCAGTCAGTCACGGGGGCGGGCCGGCCGTCCCTGCCA +
Preference number: 1 (lower is better)
Translates to: AMEAFSWSEGCLGHP*ICQSVTGAGRPSLP
Trigger: TGGCAGGGACGGCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR GCA 90 bp GCAGCGGTGGGCTCGGCCTTGGCCTGTGCAGGGGCCGTGCCCTGCTaGAGGAGCCGCTGCTCAATCTCCTGTTCCTGCTGCAGCGCCTTC +
Preference number: 1 (lower is better)
Translates to: AAVGSALACAGAVPC*RSRCSISCSCCSAF
Trigger: GAAGGCGCTGCAGCAGGAACAGGAGATTGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCCTGCACAGGCCAAGGCCGAGCCCACCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR TCA 90 bp GCTTCGAGGACGCCTGCTGCCCACCTCGGACCAGGGGCGGGGGTATaGCACTGCCGGGCATCCGAGCTGAAGAGGTCTTCTGGGCGGTGG +
Preference number: 1 (lower is better)
Translates to: ASRTPAAHLGPGAGV*HCRASELKRSSGRW
Trigger: CCACCGCCCAGAAGACCTCTTCAGCTCGGATGCCCGGCAGTGTCATACCCCCGCCCCTGGTCCGAGGTGGGCAGCAGGCGTCCTCGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR GCA 90 bp CTGTGCGCAGCGGCTCGCCGCACACCTGGACGGCACCTCCTGACCTaGACACACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGT +
Preference number: 1 (lower is better)
Translates to: LCAAARRTPGRHLLT*THLCTLTSQEQGQG
Trigger: ACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTGTGTGCAGGTCAGGAGGTGCCGTCCAGGTGTGCGGCGAGCCGCTGCGCACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR TCA 90 bp GACATCTGTGCGCAGCGGCTCGCCGCACACCTGGACGGCACCTCCTaGCCTGCACACACCTGTGCACGCTCACCTCCCAGGAGCAAGGCC +
Preference number: 1 (lower is better)
Translates to: DICAQRLAAHLDGTS*PAHTCARSPPRSKA
Trigger: GGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTGTGTGCAGGTCAGGAGGTGCCGTCCAGGTGTGCGGCGAGCCGCTGCGCACAGATGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR TCA 90 bp CCAGGGCTGTGGCCGAGGCTGAGTTCTGCAGTTTGGGTGACGGACTaGACGTGTGCAGGACACCTCGGGGCGTCGTGGCCGAACCCCGGG +
Preference number: 1 (lower is better)
Translates to: PGLWPRLSSAVWVTD*TCAGHLGASWPNPG
Trigger: CCCGGGGTTCGGCCACGACGCCCCGAGGTGTCCTGCACACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGCCACAGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR CCA 90 bp TCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTaGGCTGACAAACGCAAGGGTCCCGCCTGTGCTGAGGGGCGTCTT +
Preference number: 1 (lower is better)
Translates to: SLAVHGRGALVHRQA*ADKRKGPACAEGRL
Trigger: AAGACGCCCCTCAGCACAGGCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGACCGCCAGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 90 bp GTGGCCGAGGCTGAGTTCTGCAGTTTGGGTGACGGACTGAACGTGTaGAGGACACCTCGGGGCGTCGTGGCCGAACCCCGGGACAGCTGG +
Preference number: 1 (lower is better)
Translates to: VAEAEFCSLGDGLNV*RTPRGVVAEPRDSW
Trigger: CCAGCTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTGTCCTGCACACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 90 bp TCCAGGAGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTaGACCGCCAGGCTTGGGCTGACAAACGCAAGGGTCCCGCCTGTG +
Preference number: 1 (lower is better)
Translates to: SRRYSRWRSTAEELL*TARLGLTNARVPPV
Trigger: CACAGGCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 90 bp CGTGGGCACGGGACGCCCTCGCACTGGCATGAAGCCGGCCCAGCCTaGAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGT +
Preference number: 1 (lower is better)
Translates to: RGHGTPSHWHEAGPA*KRHGTASAFPHGTS
Trigger: ACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGGCGTCCCGTGCCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR CCA 90 bp CGGGGGCGGGGGTCTCCAGAACAAGCAGCAATGGAGGCGTTCAGCTaGAGCGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTC +
Preference number: 1 (lower is better)
Translates to: RGRGSPEQAAMEAFS*SEGCLGHPCICQSV
Trigger: GACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGCTTGTTCTGGAGACCCCCGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR CCA 90 bp AAGTCTGGAAGGTGCGGGGGCGGGGGTCTCCAGAACAAGCAGCAATaGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCA +
Preference number: 1 (lower is better)
Translates to: KSGRCGGGGLQNKQQ*RRSAGARAASAIPA
Trigger: TGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGCTTGTTCTGGAGACCCCCGCCCCCGCACCTTCCAGACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR GCA 90 bp TGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTaGTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTG +
Preference number: 1 (lower is better)
Translates to: CSQELRSCLCSMAGA*SWGGHGVFPSQRRV
Trigger: CACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR GCA 90 bp TCTCCAGAACAAGCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTaGCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGC +
Preference number: 1 (lower is better)
Translates to: SPEQAAMEAFSWSEG*LGHPCICQSVTGAG
Trigger: GCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGCTTGTTCTGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR GCA 90 bp GCTCTTCTCCTCCCGCCAGCGGCACGTGAAGTCCGTCTTGCACTGTaGACACATGTAGGGCTCCCGGGACAGCACAGTGGCGGCCGACAT +
Preference number: 1 (lower is better)
Translates to: ALLLPPAAREVRLAL*THVGLPGQHSGGRH
Trigger: ATGTCGGCCGCCACTGTGCTGTCCCGGGAGCCCTACATGTGTGCACAGTGCAAGACGGACTTCACGTGCCGCTGGCGGGAGGAGAAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 90 bp TGTCTGCCGGTCCTGCTGACCAGGGCTGTGGCCGAGGCTGAGTTCTaGAGTTTGGGTGACGGACTGAACGTGTGCAGGACACCTCGGGGC +
Preference number: 1 (lower is better)
Translates to: CLPVLLTRAVAEAEF*SLGDGLNVCRTPRG
Trigger: GCCCCGAGGTGTCCTGCACACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGCCACAGCCCTGGTCAGCAGGACCGGCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR CCA 90 bp CAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTaGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAG +
Preference number: 1 (lower is better)
Translates to: QELRSCLCSMAGACS*GGHGVFPSQRRVVQ
Trigger: CTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR TCA 90 bp CCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTaGCCAGGGCTGTGGCCGAGGCTGAGTTCTGCAGTTTGGGTGACG +
Preference number: 1 (lower is better)
Translates to: PCRRSRFSQNVCRSC*PGLWPRLSSAVWVT
Trigger: CGTCACCCAAACTGCAGAACTCAGCCTCGGCCACAGCCCTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR TCA 90 bp GAGACATACGTATGTACGTGGGCACGGGACGCCCTCGCACTGGCATaGAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTT +
Preference number: 1 (lower is better)
Translates to: ETYVCTWARDALALA*SRPSLQETRNGFCL
Trigger: AAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGGCGTCCCGTGCCCACGTACATACGTATGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR GCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTaGTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAG +
Preference number: 1 (lower is better)
Translates to: TLQPRIEVLPLQHGR*LLLGRARCLPEPAE
Trigger: CTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR CCA 90 bp TCATGGAGACATACGTATGTACGTGGGCACGGGACGCCCTCGCACTaGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCT +
Preference number: 1 (lower is better)
Translates to: SWRHTYVRGHGTPSH*HEAGPACKRHGTAS
Trigger: AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGGCGTCCCGTGCCCACGTACATACGTATGTCTCCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR TCA 90 bp AAAGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATaGGGCGGCACCAGCCCCCTAGCCCTGATGAAACTTTGCAGCCAA +
Preference number: 1 (lower is better)
Translates to: KAHGKGPPAMILVCL*GGTSPLALMKLCSQ
Trigger: TTGGCTGCAAAGTTTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR TCA 90 bp ACCTCGTCAGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATaGGGTCAGGACGGCCATAGCTGTGGGAGGTTCCAAGGGCACTTG +
Preference number: 1 (lower is better)
Translates to: TSSEGWFLVTVEFLG*GQDGHSCGRFQGHL
Trigger: CAAGTGCCCTTGGAACCTCCCACAGCTATGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCTGACGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR TCA 90 bp TCTCCAGTAGGTTCTGCACCACCTCCTCCAGGCCGACCAGGTAGATaGACTCGTTGTTGGCGGCGCTGGGCAGGAAGTTCATCTCTGGGG +
Preference number: 1 (lower is better)
Translates to: SPVGSAPPPPGRPGR*TRCWRRWAGSSSLG
Trigger: CCCCAGAGATGAACTTCCTGCCCAGCGCCGCCAACAACGAGTTCATCTACCTGGTCGGCCTGGAGGAGGTGGTGCAGAACCTACTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 90 bp AGCCCCCTAGCCCTGATGAAACTTTGCAGCCAAGAATTGAGGTCTTaGCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGT +
Preference number: 1 (lower is better)
Translates to: SPLALMKLCSQELRS*LCSMAGACSWGGHG
Trigger: ACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGCTAGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR GCA 90 bp ACAGTTACAATCAGTTGGGCTGGGGGCTCCCACATTCTGACGGCTTaGAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGG +
Preference number: 1 (lower is better)
Translates to: TVTISWAGGSHILTA*RNLILVGLSGPGPR
Trigger: CCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGCCGTCAGAATGTGGGAGCCCCCAGCCCAACTGATTGTAACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR GCA 90 bp TCCTGCTGCAGCGCCTTCACAAAGGCGGCCTTCAGCCGGCTGGTGTaGTCCACCTTGAGCGCCTTCTTCTGGTTGGTTGTCATGCAGTTC +
Preference number: 1 (lower is better)
Translates to: SCCSAFTKAAFSRLV*STLSAFFWLVVMQF
Trigger: GAACTGCATGACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTGAAGGCGCTGCAGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR CCA 90 bp GATGAGGTCAGGACGGCCATAGCTGTGGGAGGTTCCAAGGGCACTTaGCCATTCCAAACCCTACCCCCAACCTCCCCTACAACAGGCGAG +
Preference number: 1 (lower is better)
Translates to: DEVRTAIAVGGSKGT*PFQTLPPTSPTTGE
Trigger: CTCGCCTGTTGTAGGGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAGCTATGGCCGTCCTGACCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 90 bp GCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTaGTTGGTTGTCATGCAGTTCTCACACATGATGGCGCCGCTCTTC +
Preference number: 1 (lower is better)
Translates to: AAFSRLVCSTLSAFF*LVVMQFSHMMAPLF
Trigger: GAAGAGCGGCGCCATCATGTGTGAGAACTGCATGACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR TCA 90 bp GGACATGGGGCCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATaGACTCACAAGGATGGGTTGACAGCCATCAGCCCTGGAGGAACA +
Preference number: 1 (lower is better)
Translates to: GHGADPLPFEGQQSI*THKDGLTAISPGGT
Trigger: TGTTCCTCCAGGGCTGATGGCTGTCAACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGGCCCCATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 90 bp AACCAGGGCTGGAGCTCAATTGGAACCAGTGGAGCCCAGAACTCATaGAGACATACGTATGTACGTGGGCACGGGACGCCCTCGCACTGG +
Preference number: 1 (lower is better)
Translates to: NQGWSSIGTSGAQNS*RHTYVRGHGTPSHW
Trigger: CCAGTGCGAGGGCGTCCCGTGCCCACGTACATACGTATGTCTCCATGAGTTCTGGGCTCCACTGGTTCCAATTGAGCTCCAGCCCTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR GCA 90 bp CTAGCCCTGATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTaGAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTC +
Preference number: 1 (lower is better)
Translates to: LALMKLCSQELRSCL*SMAGACSWGGHGVF
Trigger: GAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR CCA 90 bp ATCACAGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATaGGGCCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAAC +
Preference number: 1 (lower is better)
Translates to: ITVCTLSLMECSLGT*GRPSPFRGAAVHMN
Trigger: GTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 90 bp CTGCTGCCGACCGGATCCTCTCCTTCTCCCTTAATGGGCAGCTTCTaGAATCCCTGCTTCTCTGGCTGGGTCTGTTCTTCAGTTTGTTCT +
Preference number: 1 (lower is better)
Translates to: LLPTGSSPSPLMGSF*NPCFSGWVCSSVCS
Trigger: AGAACAAACTGAAGAACAGACCCAGCCAGAGAAGCAGGGATTCCAGAAGCTGCCCATTAAGGGAGAAGGAGAGGATCCGGTCGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR CCA 90 bp AGGTTCATGTCACAGGTAACAGGGGACAGTTACAATCAGTTGGGCTaGGGGCTCCCACATTCTGACGGCTTGCAGGAACCTGATCCTGGT +
Preference number: 1 (lower is better)
Translates to: RFMSQVTGDSYNQLG*GLPHSDGLQEPDPG
Trigger: ACCAGGATCAGGTTCCTGCAAGCCGTCAGAATGTGGGAGCCCCCAGCCCAACTGATTGTAACTGTCCCCTGTTACCTGTGACATGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR GCA 90 bp CCAGCCCTGTCTACAGAGCAGCTGACAGAGGGAACCGTTTCCAGGTaGTGTTGGAGGTTCATGTCACAGGTAACAGGGGACAGTTACAAT +
Preference number: 1 (lower is better)
Translates to: PALSTEQLTEGTVSR*CWRFMSQVTGDSYN
Trigger: ATTGTAACTGTCCCCTGTTACCTGTGACATGAACCTCCAACAGCACCTGGAAACGGTTCCCTCTGTCAGCTGCTCTGTAGACAGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR GCA 90 bp ACCGGATCCTCTCCTTCTCCCTTAATGGGCAGCTTCTGGAATCCCTaGTTCTCTGGCTGGGTCTGTTCTTCAGTTTGTTCTTCTGCTAAG +
Preference number: 1 (lower is better)
Translates to: TGSSPSPLMGSFWNP*FSGWVCSSVCSSAK
Trigger: CTTAGCAGAAGAACAAACTGAAGAACAGACCCAGCCAGAGAAGCAGGGATTCCAGAAGCTGCCCATTAAGGGAGAAGGAGAGGATCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR GCA 90 bp GGCTCTCGGGACCAGGACCCAGGCAGTGCCTGGTTTAAGAGGGTGTaGTTTGCTGTGGGTAGAACACCCTTAACATTAATCAATAGCTAT +
Preference number: 1 (lower is better)
Translates to: GSRDQDPGSAWFKRV*FAVGRTPLTLINSY
Trigger: ATAGCTATTGATTAATGTTAAGGGTGTTCTACCCACAGCAAAGCACACCCTCTTAAACCAGGCACTGCCTGGGTCCTGGTCCCGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 90 bp CTGTCTACAGAGCAGCTGACAGAGGGAACCGTTTCCAGGTGCTGTTaGAGGTTCATGTCACAGGTAACAGGGGACAGTTACAATCAGTTG +
Preference number: 1 (lower is better)
Translates to: LSTEQLTEGTVSRCC*RFMSQVTGDSYNQL
Trigger: CAACTGATTGTAACTGTCCCCTGTTACCTGTGACATGAACCTCCAACAGCACCTGGAAACGGTTCCCTCTGTCAGCTGCTCTGTAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR GCA 90 bp CAGAGAGGGCTAACAGCTCAGGGTCGTAGGAGACAGGTATTTATTTaGCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTGCATAC +
Preference number: 1 (lower is better)
Translates to: QRGLTAQGRRRQVFI*QAHRKMRGIEMLAY
Trigger: GTATGCAAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCTCCTACGACCCTGAGCTGTTAGCCCTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 90 bp CGTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTaGAACATCATAAACGTCATAATACAACAACCCGCTTGGGGCTTA +
Preference number: 1 (lower is better)
Translates to: RPNPTPREVLNNAFT*NIINVIIQQPAWGL
Trigger: TAAGCCCCAAGCGGGTTGTTGTATTATGACGTTTATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGAGCATGGCCGGTGCTTaGTCTTGGGGCGGGCACGGT +
Preference number: 2 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRSMAGA*SWGGHG
Trigger: ACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCT...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGCCCGGGCGCTGGCCTTaGCCATGCGCATCACAGTGT +
Preference number: 2 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRPGRWP*PCASQC
Trigger: ACACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGG...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTGGGGCTGTGGCACCATaGGCCGCCCACCCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLGAVAP*AAHPPG
Trigger: CCCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCC...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGGGGCTGTGGCACCATaGGCCGCCCACCCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLGAVAP*AAHPPG
Trigger: CCCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCC...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGTGTTGTCCCCTTCAGTaGTGCTGGGGTGGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRCCPLQ*CWGGLW
Trigger: CCACAGCCCACCCCAGCATCACTGAAGGGGACAACA...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR GCA 90 bp GGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACCGGGCCGGCCGTCCCTaGCAGGGGCTGTGGCACCAT +
Preference number: 2 (lower is better)
Translates to: GGGGGSPSSTGPGSHYFHRAGRP*QGLWHH
Trigger: ATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCCG...GTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR CCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGCTTGCCTCTGCAGCATaGCCGGTGCTTGCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRLASAA*PVLALG
Trigger: CCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAG...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCCCTGCCAGGGGCTGTaGCACCATGAGCCGCCCACC +
Preference number: 2 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLPCQGL*HHEPPT
Trigger: GGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGG...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCCTGCCAGGGGCTGTaGCACCATGAGCCGCCCACC +
Preference number: 2 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGPCQGL*HHEPPT
Trigger: GGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGG...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAGGGGCTGTGGCACCATaGGCCGCCCACCCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRGAVAP*AAHPPG
Trigger: CCCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCC...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGCCCGCCAGCGGCACGTaGAGTCCGTCTTGCACTGTG +
Preference number: 2 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPPASGT*SPSCTV
Trigger: CACAGTGCAAGACGGACTTCACGTGCCGCTGGCGGG...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR GCA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCCCCGGGCGCTGGCCTTaGCCATGCGCATCACAGTGT +
Preference number: 2 (lower is better)
Translates to: RAASAIPASVSQSRGRAGPGRWP*PCASQC
Trigger: ACACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGG...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGAGCTGGAGCGAGGGCTaGCTCGGCCATCCCTGCATC +
Preference number: 2 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPSWSEG*LGHPCI
Trigger: GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCT...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTACCTGTGCAGGGGCCGTaGCCTGCTGCAGGAGCCGCT +
Preference number: 2 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLPVQGP*PAAGAA
Trigger: AGCGGCTCCTGCAGCAGGGCACGGCCCCTGCACAGG...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGATGGAGGCGTTCAGCTaGAGCGAGGGCTGCCTCGGC +
Preference number: 2 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLMEAFS*SEGCLG
Trigger: GCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCAT...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTACTTCAGCACGGGGTGTaGGGCAGCGGTGGGCTCGGC +
Preference number: 2 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLLQHGV*GSGGLG
Trigger: GCCGAGCCCACCGCTGCCCCACACCCCGTGCTGAAG...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCATCCTCGTCTGCCTATaGGGCGGCACCAGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: RAASAIPASVSQSRGRAGILVCL*GGTSPL
Trigger: TAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGAT...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp CCAGGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCTCACAGTGTCCAGGGTaGGCCGCCCGTGTGCCGGCA +
Preference number: 2 (lower is better)
Translates to: PGGGGGSPSSTGPGSHYFSQCPG*AARVPA
Trigger: TGCCGGCACACGGGCGGCTCACCCTGGACACTGTGA...GAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR TCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTGGGGTGGAGTTGGCCTaGGCGGAGGTGGCTGTTGTC +
Preference number: 2 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGGVELA*AEVAVV
Trigger: GACAACAGCCACCTCCGCTCAGGCCAACTCCACCCC...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTGTCGCGGGCCTCTCCTaGGCGGAACGCCAACTTACG +
Preference number: 2 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLVAGLS*AERQLT
Trigger: CGTAAGTTGGCGTTCCGCTCAGGAGAGGCCCGCGAC...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609040.5
3UTR-3UTR GCA 90 bp CGGACTGAACGTGTGCAGGACACCTCGGGGCGTCGTGGCCGAACCCCGGGACAGCTGCAGCATGGCCGGTaGTTGCTCTTGGGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: RTERVQDTSGRRGRTPGQLQHGR*LLLGRA
Trigger: TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAG...CTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTGTCCTGCACACGTTCAGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATCGGGCCGGCCGTCCCTaGCAGGGGCTGTGGCACCAT +
Preference number: 2 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDRAGRP*QGLWHH
Trigger: ATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCCG...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTCGGGCCGGCCGTCCCTaGCAGGGGCTGTGGCACCAT +
Preference number: 2 (lower is better)
Translates to: PSHWHEAGPACKRHGTASRAGRP*QGLWHH
Trigger: ATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCCG...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCCCCCTCCAGCTTTCTaGTCAGGGCTGCTGCCGACC +
Preference number: 2 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLPPPAF*SGLLPT
Trigger: GGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGCGGCACCTCCTGACCTaGACACACCTGTGCACGCTC +
Preference number: 2 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPRHLLT*THLCTL
Trigger: GAGCGTGCACAGGTGTGTGCAGGTCAGGAGGTGCCG...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp TGGAGGTGGCGCTGCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGGCAGGGGCCGTGCCCTaGTGCAGGAGCCGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: WRWRCPCRRSRFSQNVCRAGAVP*CRSRCS
Trigger: TGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCCTGC...CCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAAGTTGGAGGTGGCGCTaGCCTTGCCGGCGCTCACGG +
Preference number: 2 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLSWRWR*PCRRSR
Trigger: CCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCAACT...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCATGGAGGCGTTCAGCTaGAGCGAGGGCTGCCTCGGC +
Preference number: 2 (lower is better)
Translates to: AAWPVLALGAGTVSSRASMEAFS*SEGCLG
Trigger: GCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCAT...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp GGACACCTCGGGGCGTCGTGGCCGAACCCCGGGACAGCTGGCTGGAGGCCTGCTCGAGCAGGCTGGTGTTaGGAACATTGGCGACGCGGA +
Preference number: 2 (lower is better)
Translates to: GHLGASWPNPGTAGWRPARAGWC*EHWRRG
Trigger: TCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCG...AGCAGGCCTCCAGCCAGCTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR CCA 90 bp GGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACGTGCCCGGGACAGCACAGTaGCGGCCGACATCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: GGGGSPSSTGPGSHYFHVPGTAQ*RPTSCL
Trigger: CAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCGGG...CACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp TGGAGGTGGCGCTGCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGCTTCAGCACGGGGTGTaGGGCAGCGGTGGGCTCGGC +
Preference number: 2 (lower is better)
Translates to: WRWRCPCRRSRFSQNVCRLQHGV*GSGGLG
Trigger: GCCGAGCCCACCGCTGCCCCACACCCCGTGCTGAAG...CCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTGAACCCCGGGACAGCTaGCTGGAGGCCTGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLEPRDS*LEACFS
Trigger: GCTGAAGCAGGCCTCCAGCCAGCTGTCCCGGGGTTC...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR TCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCGGGCATGACGACCTGTaGGCTCGCCTGTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIGHDDL*ARLWPQ
Trigger: CTGGGGCCACAGGCGAGCTCACAGGTCGTCATGCCC...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR TCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGCCCGCCAGCGGCACGTaGAGTCCGTCTTGCACTGTG +
Preference number: 2 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPPASGT*SPSCTV
Trigger: CACAGTGCAAGACGGACTTCACGTGCCGCTGGCGGG...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACGTGAGCATGGCCGGTGCTTaGTCTTGGGGCGGGCACGGT +
Preference number: 2 (lower is better)
Translates to: GGGGSPSSTGPGSHYFHVSMAGA*SWGGHG
Trigger: ACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCT...CACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTACTGCAGCATGGCCGGTaGTTGCTCTTGGGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLLQHGR*LLLGRA
Trigger: TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAG...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGCAAGAATTGAGGTCTTaGCTCTGCAGCATGGCCGGT +
Preference number: 2 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRQELRS*LCSMAG
Trigger: ACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTG...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCCGCTGGCCTTGCCCATaGGCATCACAGTGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: AAWPVLALGAGTVSSRASRWPCP*ASQCPG
Trigger: CCCTGGACACTGTGATGCGCATGGGCAAGGCCAGCG...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGTCTGCTCAGGGCTGCTaGCGACCGGATCCTCTCCTT +
Preference number: 2 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPSAQGC*RPDPLL
Trigger: AAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGA...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAAGCTTCGAGGACGCCTaGTGCCCACCTCGGACCAGG +
Preference number: 2 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLSFEDA*CPPRTR
Trigger: CCTGGTCCGAGGTGGGCAGCAGGCGTCCTCGAAGCT...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR GCA 90 bp CCAGGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCGGCCGCCTGTCGGCTTaGTGGAGACTCGGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: PGGGGGSPSSTGPGSHYFGRLSA*WRLGRG
Trigger: ACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCC...GAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGCCGGTGCTTGCTCTTaGGGCGGGCACGGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLAGACS*GGHGVF
Trigger: GAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGC...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAATGGAGGCGTTCAGCTaGAGCGAGGGCTGCCTCGGC +
Preference number: 2 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLMEAFS*SEGCLG
Trigger: GCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCAT...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCGGTGTGGGGCAGCGGTaGGCTCGGCCTTGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: AGPACKRHGTASAFPHGTGVGQR*ARPWPV
Trigger: CACAGGCCAAGGCCGAGCCCACCGCTGCCCCACACC...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR TCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCACAGGGCCAGCGGGATaGTGCAGCGTACAACAGGGA +
Preference number: 2 (lower is better)
Translates to: AAWPVLALGAGTVSSRASTGPAG*CSVQQG
Trigger: TCCCTGTTGTACGCTGCATCATCCCGCTGGCCCTGT...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCCTGCAGCATGGCCGGTaGTTGCTCTTGGGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPLQHGR*LLLGRA
Trigger: TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAG...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCCGGGCGCTGGCCTTaGCCATGCGCATCACAGTGT +
Preference number: 2 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRPGRWP*PCASQC
Trigger: ACACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGG...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGTGCCTCGGCCATCCCTaGATCTGTCAGTCAGTCACG +
Preference number: 2 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPCLGHP*ICQSVT
Trigger: CGTGACTGACTGACAGATGCAGGGATGGCCGAGGCA...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGTGCCTCGGCCATCCCTaGATCTGTCAGTCAGTCACG +
Preference number: 2 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLCLGHP*ICQSVT
Trigger: CGTGACTGACTGACAGATGCAGGGATGGCCGAGGCA...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CGCCTTCACAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTTTCGAGGACGCCTGCTaGCCACCTCGGACCAGGGGC +
Preference number: 2 (lower is better)
Translates to: RLHKGGLQPAGVLHLERLFEDAC*PPRTRG
Trigger: GCCCCTGGTCCGAGGTGGGCAGCAGGCGTCCTCGAA...AAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTGAAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR GCA 90 bp CGCAAGGGTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGGCCGCCTGTCGGCTTaGTGGAGACTCGGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: RKGPACAEGRLLPVGGGAGRLSA*WRLGRG
Trigger: ACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCC...AGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACCCTTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCTTGCCTCTGCAGCATaGCCGGTGCTTGCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGLASAA*PVLALG
Trigger: CCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAG...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp GCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGGGCTGTGGCTCGCCGCACACCTaGACGGCACCTCCTGACCTG +
Preference number: 2 (lower is better)
Translates to: AGAHGSLRMSAGPADQGCGSPHT*TAPPDL
Trigger: CAGGTCAGGAGGTGCCGTCCAGGTGTGCGGCGAGCC...ACAGCCCTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR CCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCAGCTGGAGCTGGGGCTaGGGGCCGGCAGGTGCGGCT +
Preference number: 2 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPSWSWG*GPAGAA
Trigger: AGCCGCACCTGCCGGCCCCCAGCCCCAGCTCCAGCT...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp CAGGAGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGCGCCTGTCGGCTTGCTaGAGACTCGGCAGAGGTGAC +
Preference number: 2 (lower is better)
Translates to: QEVLSLAVHGRGALVHRQRLSAC*RLGRGD
Trigger: GTCACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCG...CTGGCGGTGCACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCTTCCACGTGGCTGACTaGGGGATGGAGCGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPFHVAD*GMERGG
Trigger: CCCACCCCGCTCCATCCCCCAGTCAGCCACGTGGAA...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR CAA 90 bp CCGGTCCTGCTGACCAGGGCTGTGGCCGAGGCTGAGTTCTGCAGTTaGGGTGACGGACTGAACGTGTGCAGGACACCTCGGGGCGTCGTG +
Preference number: 2 (lower is better)
Translates to: PVLLTRAVAEAEFCS*GDGLNVCRTPRGVV
Trigger: CACGACGCCCCGAGGTGTCCTGCACACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGCCACAGCCCTGGTCAGCAGGACCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR CAA 90 bp ATGTCCAGGAGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTaGTGCACCGCCAGGCTTGGGCTGACAAACGCAAGGGTCCCGCCT +
Preference number: 2 (lower is better)
Translates to: MSRRYSRWRSTAEEL*CTARLGLTNARVPP
Trigger: AGGCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCTGGACAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp AGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTATCCTCGTCTGCCTATaGGGCGGCACCAGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: RYSRWRSTAEELLCTARLILVCL*GGTSPL
Trigger: TAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGAT...AAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGAAGGTCCCCCAGCGATaGTCCTCGTCTGCCTATGAG +
Preference number: 2 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRKVPQR*SSSAYE
Trigger: CTCATAGGCAGACGAGGATCATCGCTGGGGGACCTT...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp TGGAGGTGGCGCTGCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGGGCCGACCAGGTAGATaGACTCGTTGTTGGCGGCGC +
Preference number: 2 (lower is better)
Translates to: WRWRCPCRRSRFSQNVCRGRPGR*TRCWRR
Trigger: GCGCCGCCAACAACGAGTTCATCTACCTGGTCGGCC...CCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GCTTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTGCAGCATGGCCGGTaGTTGCTCTTGGGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: ACRNLILVGLSGPGPRQCLQHGR*LLLGRA
Trigger: TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAG...GCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp GAAATCCTGACATCTGTGCGCAGCGGCTCGCCGCACACCTGGACGGCACCTCCTCCCGGGCGCTGGCCTTaGCCATGCGCATCACAGTGT +
Preference number: 2 (lower is better)
Translates to: EILTSVRSGSPHTWTAPPPGRWP*PCASQC
Trigger: ACACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGG...AGGAGGTGCCGTCCAGGTGTGCGGCGAGCCGCTGCGCACAGATGTCAGGATTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCTTTCTGCTCAGGGCTaGTGCCGACCGGATCCTCTC +
Preference number: 2 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQLSAQG*CRPDPL
Trigger: GAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAG...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp GCTTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCCCCCTCCAGCTTTCTaGTCAGGGCTGCTGCCGACC +
Preference number: 2 (lower is better)
Translates to: ACRNLILVGLSGPGPRQCPPPAF*SGLLPT
Trigger: GGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG...GCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp GGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACTTCAGCCGGCTGGTGTaGTCCACCTTGAGCGCCTTC +
Preference number: 2 (lower is better)
Translates to: GGGGGSPSSTGPGSHYFHFSRLV*STLSAF
Trigger: GAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAA...GTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp AGGTGGCGCTGCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCCGGAGGGTGGTGCAGTaGGTCCTTCTAGACCAGGGG +
Preference number: 2 (lower is better)
Translates to: RWRCPCRRSRFSQNVCRSRRVVQ*VLLDQG
Trigger: CCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCG...GGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACCCTGCCAGGGGCTGTaGCACCATGAGCCGCCCACC +
Preference number: 2 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRAPCQGL*HHEPPT
Trigger: GGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGG...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCATGGAGGCGTTCAGCTaGAGCGAGGGCTGCCTCGGC +
Preference number: 2 (lower is better)
Translates to: AGPACKRHGTASAFPHGTMEAFS*SEGCLG
Trigger: GCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCAT...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGGGAGCAAGGCCAGGGTaGCTTAAGATTGCGTCCATC +
Preference number: 2 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLGARPG*LKIASI
Trigger: GATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCC...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTGGCTCGCCGCACACCTaGACGGCACCTCCTGACCTG +
Preference number: 2 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPGSPHT*TAPPDL
Trigger: CAGGTCAGGAGGTGCCGTCCAGGTGTGCGGCGAGCC...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCGGGACGCCCTCGCACTaGCATGAAGCCGGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPGTPSH*HEAGPA
Trigger: GGCTGGGCCGGCTTCATGCCAGTGCGAGGGCGTCCC...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCAGGTGTGGGGCAGCGGTaGGCTCGGCCTTGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRAGVGQR*ARPWPV
Trigger: CACAGGCCAAGGCCGAGCCCACCGCTGCCCCACACC...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAGAACCCCGGGACAGCTaGCTGGAGGCCTGTAGCACA +
Preference number: 2 (lower is better)
Translates to: RARCLPEPAEGGAVGPSREPRDS*LEACST
Trigger: TGTGCTACAGGCCTCCAGCCAGCTGTCCCGGGGTTC...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609040.5
3UTR CAA 90 bp CCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTaGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCA +
Preference number: 2 (lower is better)
Translates to: PRIEVLPLQHGRCLL*GRARCLPEPAEGGA
Trigger: TGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR CAA 90 bp CCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTaGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: PVLRGVFFQLEVALP*PALTVLSECLPVLL
Trigger: CAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCATCCTCGTCTGCCTATaGGGCGGCACCAGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: AGPACKRHGTASAFPHGTILVCL*GGTSPL
Trigger: TAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGAT...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp GTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTGGGCTGACAAACGCAAGATCCTCGTCTGCCTATaGGGCGGCACCAGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: VHGRGALVHRQAWADKRKILVCL*GGTSPL
Trigger: TAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGAT...CTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCATCACAGTGTCCAGGGTaGGCCGCCCGTGTGCCGGCA +
Preference number: 2 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRASQCPG*AARVPA
Trigger: TGCCGGCACACGGGCGGCTCACCCTGGACACTGTGA...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGCCCTGGATCTTGGAATaGAAGCCACCCTTCCCCAAT +
Preference number: 2 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPPWILE*KPPFPN
Trigger: ATTGGGGAAGGGTGGCTTTCATTCCAAGATCCAGGG...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp CTTCCACGGGGCCTGGCTCGCACTATTTCCACGTGGCTGACTGGGGGATGGAGCGGCCGACCAGGTAGATaGACTCGTTGTTGGCGGCGC +
Preference number: 2 (lower is better)
Translates to: LPRGLARTISTWLTGGWSGRPGR*TRCWRR
Trigger: GCGCCGCCAACAACGAGTTCATCTACCTGGTCGGCC...GCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGTGGTGTGCTCCACCTTaGGCGCCTTCTTCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPWCAPP*APSSGW
Trigger: CCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCA...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGTTGAGGTCTTGCCTCTaGAGCATGGCCGGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPLRSCL*SMAGAC
Trigger: GCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAA...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACTTGAGGTCTTGCCTCTaGAGCATGGCCGGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: GGGGGSPSSTGPGSHYFHLRSCL*SMAGAC
Trigger: GCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAA...GTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GAAATCCTGACATCTGTGCGCAGCGGCTCGCCGCACACCTGGACGGCACCTCCTCGCTGGCCTTGCCCATaGGCATCACAGTGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: EILTSVRSGSPHTWTAPPRWPCP*ASQCPG
Trigger: CCCTGGACACTGTGATGCGCATGGGCAAGGCCAGCG...AGGAGGTGCCGTCCAGGTGTGCGGCGAGCCGCTGCGCACAGATGTCAGGATTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCAGCTGGAGCGAGGGCTaGCTCGGCCATCCCTGCATC +
Preference number: 2 (lower is better)
Translates to: PVHAHLPGARPGWLKIASSWSEG*LGHPCI
Trigger: GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCT...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CCAGGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCGTCCGTCTTGCACTGTaGACACATGTAGGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: PGGGGGSPSSTGPGSHYFVRLAL*THVGLP
Trigger: CGGGAGCCCTACATGTGTGCACAGTGCAAGACGGAC...GAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAGGGGCCGTGCCCTGCTaGAGGAGCCGCTGCTCAATC +
Preference number: 2 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEGAVPC*RSRCSI
Trigger: GATTGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCC...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATCGGAGGGTGGTGCAGTaGGTCCTTCTAGACCAGGGG +
Preference number: 2 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDRRVVQ*VLLDQG
Trigger: CCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCG...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTGGCTCGCCGCACACCTaGACGGCACCTCCTGACCTG +
Preference number: 2 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRGSPHT*TAPPDL
Trigger: CAGGTCAGGAGGTGCCGTCCAGGTGTGCGGCGAGCC...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCGGGAAGAAGCCAGCCTaGGTGCTCCTTCTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIGKKPA*VLLLGG
Trigger: TCCTCCCAGAAGGAGCACCCAGGCTGGCTTCTTCCC...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp GCTTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCTGCTCCCTGGGGACATaGGGCCGACCCTCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: ACRNLILVGLSGPGPRQCCSLGT*GRPSPF
Trigger: AAAGGGAGAGGGTCGGCCCCATGTCCCCAGGGAGCA...GCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCTGGCCTGAGCGGAGGTaGCTGTTGTCCCCTTCAGTG +
Preference number: 2 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPWPERR*LLSPSV
Trigger: CACTGAAGGGGACAACAGCCACCTCCGCTCAGGCCA...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR CCA 90 bp GCCGAGGCTGAGTTCTGCAGTTTGGGTGACGGACTGAACGTGTGCAGGACACCTTGCGCAGCGCCAGCTTaGCGGCCGCCTGTCGGCTTG +
Preference number: 2 (lower is better)
Translates to: AEAEFCSLGDGLNVCRTPCAAPA*RPPVGL
Trigger: CAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCA...AGGTGTCCTGCACACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR CAA 90 bp TTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTaGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGT +
Preference number: 2 (lower is better)
Translates to: LQPRIEVLPLQHGRC*LLGRARCLPEPAEG
Trigger: ACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp AGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTAAGGTCCCCCAGCGATaGTCCTCGTCTGCCTATGAG +
Preference number: 2 (lower is better)
Translates to: RYSRWRSTAEELLCTARLKVPQR*SSSAYE
Trigger: CTCATAGGCAGACGAGGATCATCGCTGGGGGACCTT...AAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATACAGGGCCAGCGGGATaGTGCAGCGTACAACAGGGA +
Preference number: 2 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDTGPAG*CSVQQG
Trigger: TCCCTGTTGTACGCTGCATCATCCCGCTGGCCCTGT...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAAGGGGTGGAGTTGGCCTaGGCGGAGGTGGCTGTTGTC +
Preference number: 2 (lower is better)
Translates to: KPAQPARDTERLLPFLTEGVELA*AEVAVV
Trigger: GACAACAGCCACCTCCGCTCAGGCCAACTCCACCCC...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR TCA 90 bp CCAGGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCTGCAGTTCTCACACATaGTGGCGCCGCTCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: PGGGGGSPSSTGPGSHYFCSSHT*WRRSSP
Trigger: AGGAGAAGAGCGGCGCCATCATGTGTGAGAACTGCA...GAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp GTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTGTGGTGTGCTCCACCTTaGGCGCCTTCTTCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: VPPVLRGVFFQLEVALPLWCAPP*APSSGW
Trigger: CCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCA...CAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp GGGCCTGGCTCGCACTATTTCCACGTGGCTGACTGGGGGATGGAGCGGGGTGGGGTTCTGCAGTTTGGGTaGCGGACTGAACGTGTGCAG +
Preference number: 2 (lower is better)
Translates to: GPGSHYFHVADWGMERGGVLQFG*RTERVQ
Trigger: CTGCACACGTTCAGTCCGTCACCCAAACTGCAGAAC...CCCACCCCGCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCGAGCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GTTGTCATGCAGTTCTCACACATGATGGCGCCGCTCTTCTCCTCCCGCCAGCGGAGCATGGCCGGTGCTTaGTCTTGGGGCGGGCACGGT +
Preference number: 2 (lower is better)
Translates to: VVMQFSHMMAPLFSSRQRSMAGA*SWGGHG
Trigger: ACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCT...CCGCTGGCGGGAGGAGAAGAGCGGCGCCATCATGTGTGAGAACTGCATGACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGCAAGAATTGAGGTCTTaGCTCTGCAGCATGGCCGGT +
Preference number: 2 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQQELRS*LCSMAG
Trigger: ACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTG...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCTGCCTCGGCCATCCCTaGATCTGTCAGTCAGTCACG +
Preference number: 2 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCICLGHP*ICQSVT
Trigger: CGTGACTGACTGACAGATGCAGGGATGGCCGAGGCA...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTAGCTGGAGCGAGGGCTaGCTCGGCCATCCCTGCATC +
Preference number: 2 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRSWSEG*LGHPCI
Trigger: GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCT...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTAGCTTCTGGAATCCCTaGTTCTCTGGCTGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLSFWNP*FSGWVC
Trigger: ACAGACCCAGCCAGAGAAGCAGGGATTCCAGAAGCT...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCCCCTCCAGCTTTCTaGTCAGGGCTGCTGCCGACC +
Preference number: 2 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRPPPAF*SGLLPT
Trigger: GGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGACACGGAACGGCTTCTaGCTTTCCTCACGGAACCAG +
Preference number: 2 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQTRNGF*LSSRNQ
Trigger: CTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGT...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTGAAGCCGGCCCAGCCTaGAAGAGACACGGAACGGCT +
Preference number: 2 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPEAGPA*KRHGTA
Trigger: AGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTC...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp GTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTGGGCTGACAAACGCAAGTCTTCTCCAGCTGTTTaGGCAGCGCCAGCTTGGCGG +
Preference number: 2 (lower is better)
Translates to: VHGRGALVHRQAWADKRKSSPAV*AAPAWR
Trigger: CCGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGA...CTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGTCTCCAGTAGGTTCTaGACCACCTCCTCCAGGCCG +
Preference number: 2 (lower is better)
Translates to: PSHWHEAGPACKRHGTASVSSRF*TTSSRP
Trigger: CGGCCTGGAGGAGGTGGTGCAGAACCTACTGGAGAC...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR GCA 90 bp AGGTGGCGCTGCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGGCGGCCGACATCCTaGCTGCTTGTGTCTCCAGTA +
Preference number: 2 (lower is better)
Translates to: RWRCPCRRSRFSQNVCRSWRPTS*LLVSPV
Trigger: TACTGGAGACACAAGCAGGCAGGATGTCGGCCGCCA...GGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGTTAATGGGCAGCTTCTaGAATCCCTGCTTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLLMGSF*NPCFSG
Trigger: GCCAGAGAAGCAGGGATTCCAGAAGCTGCCCATTAA...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTTGCTCCCTGGGGACATaGGGCCGACCCTCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPCSLGT*GRPSPF
Trigger: AAAGGGAGAGGGTCGGCCCCATGTCCCCAGGGAGCA...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp TGGAGGTGGCGCTGCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGCGTTGTTGGCGGCGCTaGGCAGGAAGTTCATCTCTG +
Preference number: 2 (lower is better)
Translates to: WRWRCPCRRSRFSQNVCRRCWRR*AGSSSL
Trigger: CAGAGATGAACTTCCTGCCCAGCGCCGCCAACAACG...CCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp TGTAGGGCTCCCGGGACAGCACAGTGGCGGCCGACATCCTGCCTGCTTGTGTCTAAGGTCCCCCAGCGATaGTCCTCGTCTGCCTATGAG +
Preference number: 2 (lower is better)
Translates to: CRAPGTAQWRPTSCLLVSKVPQR*SSSAYE
Trigger: CTCATAGGCAGACGAGGATCATCGCTGGGGGACCTT...AGACACAAGCAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCGGGAGCCCTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTTCACAGTGTCCAGGGTaGGCCGCCCGTGTGCCGGCA +
Preference number: 2 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGSQCPG*AARVPA
Trigger: TGCCGGCACACGGGCGGCTCACCCTGGACACTGTGA...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR TCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCACAGGGCCAGCGGGATaGTGCAGCGTACAACAGGGA +
Preference number: 2 (lower is better)
Translates to: PVHAHLPGARPGWLKIASTGPAG*CSVQQG
Trigger: TCCCTGTTGTACGCTGCATCATCCCGCTGGCCCTGT...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATTTGAGGTCTTGCCTCTaGAGCATGGCCGGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDLRSCL*SMAGAC
Trigger: GCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAA...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTGGGCTGACAAACGCAAGTTGAGGTCTTGCCTCTaGAGCATGGCCGGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: VHGRGALVHRQAWADKRKLRSCL*SMAGAC
Trigger: GCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAA...CTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp CACCGCCAGGCTTGGGCTGACAAACGCAAGGGTCCCGCCTGTGCTGAGGGGCGTCAAGAATTGAGGTCTTaGCTCTGCAGCATGGCCGGT +
Preference number: 2 (lower is better)
Translates to: HRQAWADKRKGPACAEGRQELRS*LCSMAG
Trigger: ACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTG...ACGCCCCTCAGCACAGGCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GCGGCCGCCTGTCGGCTTGCTGGAGACTCGGCAGAGGTGACCACAGAGGCCACACAAGAATTGAGGTCTTaGCTCTGCAGCATGGCCGGT +
Preference number: 2 (lower is better)
Translates to: AAACRLAGDSAEVTTEATQELRS*LCSMAG
Trigger: ACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTG...TGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACAGCTTCTGGAATCCCTaGTTCTCTGGCTGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: GGGGGSPSSTGPGSHYFHSFWNP*FSGWVC
Trigger: ACAGACCCAGCCAGAGAAGCAGGGATTCCAGAAGCT...GTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR GCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCTCTGCTCAGGGCTGCTaGCGACCGGATCCTCTCCTT +
Preference number: 2 (lower is better)
Translates to: PVHAHLPGARPGWLKIASSAQGC*RPDPLL
Trigger: AAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGA...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp GGATCATGTCCAGGAGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGTCTCCAGTAGGTTCTaGACCACCTCCTCCAGGCCG +
Preference number: 2 (lower is better)
Translates to: GSCPGGTLAGGPRPRSSCVSSRF*TTSSRP
Trigger: CGGCCTGGAGGAGGTGGTGCAGAACCTACTGGAGAC...ACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCTGGACATGATCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGAGGGTGGTGCAGTaGGTCCTTCTAGACCAGGGG +
Preference number: 2 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRARRVVQ*VLLDQG
Trigger: CCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCG...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp GTTGTCATGCAGTTCTCACACATGATGGCGCCGCTCTTCTCCTCCCGCCAGCGGCGGAGGGTGGTGCAGTaGGTCCTTCTAGACCAGGGG +
Preference number: 2 (lower is better)
Translates to: VVMQFSHMMAPLFSSRQRRRVVQ*VLLDQG
Trigger: CCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCG...CCGCTGGCGGGAGGAGAAGAGCGGCGCCATCATGTGTGAGAACTGCATGACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp TTGACGAGCAGGCTGGTGTTGGGAACATTGGCGACGCGGATGAGGCCCTGCTGGCTTGCCTCTGCAGCATaGCCGGTGCTTGCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: LTSRLVLGTLATRMRPCWLASAA*PVLALG
Trigger: CCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAG...CCAGCAGGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR CCA 90 bp AAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGCTTGCCTCTGCAGCATaGCCGGTGCTTGCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: KAAFSRLVCSTLSAFFWLLASAA*PVLALG
Trigger: CCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAG...CAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTGAATCCCTGCTTCTCTaGCTGGGTCTGTTCTTCAGT +
Preference number: 2 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLESLLL*LGLFFS
Trigger: ACTGAAGAACAGACCCAGCCAGAGAAGCAGGGATTC...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGAATCCCTGCTTCTCTaGCTGGGTCTGTTCTTCAGT +
Preference number: 2 (lower is better)
Translates to: AAWPVLALGAGTVSSRASESLLL*LGLFFS
Trigger: ACTGAAGAACAGACCCAGCCAGAGAAGCAGGGATTC...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCACATACGTATGTACGTaGGCACGGGACGCCCTCGCA +
Preference number: 2 (lower is better)
Translates to: AGPACKRHGTASAFPHGTTYVCT*ARDALA
Trigger: TGCGAGGGCGTCCCGTGCCCACGTACATACGTATGT...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTTCGGATCTGGCCCCCTaGTCAGACCCAGCTGACCCA +
Preference number: 2 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRSDLAP*SDPADP
Trigger: TGGGTCAGCTGGGTCTGACCAGGGGGCCAGATCCGA...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGCCCGGGACAGCACAGTaGCGGCCGACATCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: AHLPGARPGWLKIASIEMPGTAQ*RPTSCL
Trigger: CAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCGGG...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR CCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGGCGCCTTCTTCTGGTTaGTTGTCATGCAGTTCTCAC +
Preference number: 2 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRAPSSG*LSCSSH
Trigger: GTGAGAACTGCATGACAACCAACCAGAAGAAGGCGC...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR CAA 90 bp CAGCCCCCTAGCCCTGATGAAACTTTGCAGCCAAGAATTGAGGTCTaGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGG +
Preference number: 2 (lower is better)
Translates to: QPPSPDETLQPRIEV*PLQHGRCLLLGRAR
Trigger: CCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGCTAGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR CAA 90 bp GGCGGCACCAGCCCCCTAGCCCTGATGAAACTTTGCAGCCAAGAATaGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGC +
Preference number: 2 (lower is better)
Translates to: GGTSPLALMKLCSQE*RSCLCSMAGACSWG
Trigger: GCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGCTAGGGGGCTGGTGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACATCACAGTGTCCAGGGTaGGCCGCCCGTGTGCCGGCA +
Preference number: 2 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTSQCPG*AARVPA
Trigger: TGCCGGCACACGGGCGGCTCACCCTGGACACTGTGA...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR TCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGTCTGAAAGCAAATCCTaGCAGCAACCCCTAGGTTTA +
Preference number: 2 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLSESKS*QQPLGL
Trigger: TAAACCTAGGGGTTGCTGTCAGGATTTGCTTTCAGA...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGAAGTTTCCTACAGACTaGGGATATTCACACGACAGG +
Preference number: 2 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPKFPTD*GYSHDR
Trigger: CCTGTCGTGTGAATATCCTCAGTCTGTAGGAAACTT...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGAGCATGGCCGGTGCTTaGTCTTGGGGCGGGCACGGT +
Preference number: 2 (lower is better)
Translates to: AHLPGARPGWLKIASIEMSMAGA*SWGGHG
Trigger: ACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCT...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTAGCATGGCCGGTGCTTaGTCTTGGGGCGGGCACGGT +
Preference number: 2 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGSMAGA*SWGGHG
Trigger: ACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCT...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCGAAGCCGGCCCAGCCTaGAAGAGACACGGAACGGCT +
Preference number: 2 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLEAGPA*KRHGTA
Trigger: AGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTC...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAATCTTCTCCAGCTGTTTaGGCAGCGCCAGCTTGGCGG +
Preference number: 2 (lower is better)
Translates to: KPAQPARDTERLLPFLTESSPAV*AAPAWR
Trigger: CCGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGA...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR GCA 90 bp GGATCATGTCCAGGAGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGTCCGTCTTGCACTGTaGACACATGTAGGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: GSCPGGTLAGGPRPRSSCVRLAL*THVGLP
Trigger: CGGGAGCCCTACATGTGTGCACAGTGCAAGACGGAC...ACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCTGGACATGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp GGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACTCAATCTCCTGTTCCTaGTGCAGCGCCTTCACAAAG +
Preference number: 2 (lower is better)
Translates to: GGGGGSPSSTGPGSHYFHSISCS*CSAFTK
Trigger: CTTTGTGAAGGCGCTGCAGCAGGAACAGGAGATTGA...GTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCTTGCCTCTGCAGCATaGCCGGTGCTTGCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRLASAA*PVLALG
Trigger: CCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAG...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCCAGAACAAGCAGCAATaGAGGCGTTCAGCTGGAGCG +
Preference number: 2 (lower is better)
Translates to: AGPACKRHGTASAFPHGTQNKQQ*RRSAGA
Trigger: CGCTCCAGCTGAACGCCTCCATTGCTGCTTGTTCTG...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGTTAATGGGCAGCTTCTaGAATCCCTGCTTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQLMGSF*NPCFSG
Trigger: GCCAGAGAAGCAGGGATTCCAGAAGCTGCCCATTAA...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp GGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACTTAATGGGCAGCTTCTaGAATCCCTGCTTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: GGGGGSPSSTGPGSHYFHLMGSF*NPCFSG
Trigger: GCCAGAGAAGCAGGGATTCCAGAAGCTGCCCATTAA...GTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR CCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGGAGCAAGGCCAGGGTaGCTTAAGATTGCGTCCATC +
Preference number: 2 (lower is better)
Translates to: PSHWHEAGPACKRHGTASGARPG*LKIASI
Trigger: GATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCC...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTGGGAAGAAGCCAGCCTaGGTGCTCCTTCTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRGKKPA*VLLLGG
Trigger: TCCTCCCAGAAGGAGCACCCAGGCTGGCTTCTTCCC...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp CGCAAGGGTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCTGAAGAGGTCTTCTaGGCGGTGGCTTCCTTTTGT +
Preference number: 2 (lower is better)
Translates to: RKGPACAEGRLLPVGGGAAEEVF*AVASFC
Trigger: ACAAAAGGAAGCCACCGCCCAGAAGACCTCTTCAGC...AGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACCCTTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR CCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCATGCTGGGGTGGGCTGTaGGATGTTGACGAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRACWGGL*DVDEQA
Trigger: AGCCTGCTCGTCAACATCCCACAGCCCACCCCAGCA...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR CCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTTTGAGCGCCTTCTTCTaGTTGGTTGTCATGCAGTTC +
Preference number: 2 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLLSAFF*LVVMQF
Trigger: GAACTGCATGACAACCAACCAGAAGAAGGCGCTCAA...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR CAA 90 bp CGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAACTTaGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGC +
Preference number: 2 (lower is better)
Translates to: RLPMRRHQPPSPDET*QPRIEVLPLQHGRC
Trigger: GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR CAA 90 bp GACAGTTACAATCAGTTGGGCTGGGGGCTCCCACATTCTGACGGCTaGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAG +
Preference number: 2 (lower is better)
Translates to: DSYNQLGWGLPHSDG*QEPDPGRALGTRTQ
Trigger: CTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGCCGTCAGAATGTGGGAGCCCCCAGCCCAACTGATTGTAACTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR TCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCAAAGGTCCCCCAGCGATaGTCCTCGTCTGCCTATGAG +
Preference number: 2 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPKVPQR*SSSAYE
Trigger: CTCATAGGCAGACGAGGATCATCGCTGGGGGACCTT...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR TCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAAAGGTCCCCCAGCGATaGTCCTCGTCTGCCTATGAG +
Preference number: 2 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEKVPQR*SSSAYE
Trigger: CTCATAGGCAGACGAGGATCATCGCTGGGGGACCTT...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCTGTAGCAGTTGTGTTTaGAGGCGGTGGCCCTACAAA +
Preference number: 2 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPCSSCV*RRWPYK
Trigger: TTTGTAGGGCCACCGCCTTCAAACACAACTGCTACA...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCCCCTGGATCTTGGAATaGAAGCCACCCTTCCCCAAT +
Preference number: 2 (lower is better)
Translates to: AGPACKRHGTASAFPHGTPWILE*KPPFPN
Trigger: ATTGGGGAAGGGTGGCTTTCATTCCAAGATCCAGGG...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACACTGCAGCATGGCCGGTaGTTGCTCTTGGGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTLQHGR*LLLGRA
Trigger: TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAG...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCATGCCTCGGCCATCCCTaGATCTGTCAGTCAGTCACG +
Preference number: 2 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRACLGHP*ICQSVT
Trigger: CGTGACTGACTGACAGATGCAGGGATGGCCGAGGCA...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCAGCTGGAGCGAGGGCTaGCTCGGCCATCCCTGCATC +
Preference number: 2 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLSWSEG*LGHPCI
Trigger: GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCT...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGCTTCTGGAATCCCTaGTTCTCTGGCTGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: AGPACKRHGTASAFPHGTSFWNP*FSGWVC
Trigger: ACAGACCCAGCCAGAGAAGCAGGGATTCCAGAAGCT...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAATGCTGCAGGAGCCGCTaGTCAATCTCCTGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDECCRSR*SISCSC
Trigger: GCAGGAACAGGAGATTGAGCAGCGGCTCCTGCAGCA...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCGAATCCCTGCTTCTCTaGCTGGGTCTGTTCTTCAGT +
Preference number: 2 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIESLLL*LGLFFS
Trigger: ACTGAAGAACAGACCCAGCCAGAGAAGCAGGGATTC...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR CAA 90 bp GCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTaGGTTGTCATGCAGTTCTCACACATGATGGCGCCGCTCTTCTCC +
Preference number: 2 (lower is better)
Translates to: AFSRLVCSTLSAFFW*VVMQFSHMMAPLFS
Trigger: GGAGAAGAGCGGCGCCATCATGTGTGAGAACTGCATGACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTACAGGGCCAGCGGGATaGTGCAGCGTACAACAGGGA +
Preference number: 2 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGTGPAG*CSVQQG
Trigger: TCCCTGTTGTACGCTGCATCATCCCGCTGGCCCTGT...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR TCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCCCCAAACGGAAATCCTaGCATCTGTGCGCAGCGGCT +
Preference number: 2 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLPKRKS*HLCAAA
Trigger: AGCCGCTGCGCACAGATGTCAGGATTTCCGTTTGGG...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR TCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCAACAACAGGCGAGGTGTaGACTCTGAGATCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPTTGEV*TLRSPQ
Trigger: CTGGGGAGATCTCAGAGTTCACACCTCGCCTGTTGT...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR TCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCCAGGGGCGGGGGTATaGCACTGCCGGGCATCCGAG +
Preference number: 2 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKPGAGV*HCRASE
Trigger: CTCGGATGCCCGGCAGTGTCATACCCCCGCCCCTGG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR TCA 90 bp GCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGGTTGTCATGATCCTCTGTCCCTaGATCTGCACACTGGGCACC +
Preference number: 2 (lower is better)
Translates to: AFSRLVCSTLSAFFWLVVMILCP*ICTLGT
Trigger: GGTGCCCAGTGTGCAGATTCAGGGACAGAGGATCAT...GACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR TCA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGTGGGCTGTGGGATGTTaGCGAGCAGGCTGGTGTTGG +
Preference number: 2 (lower is better)
Translates to: AHLPGARPGWLKIASIEMWAVGC*RAGWCW
Trigger: CCAACACCAGCCTGCTCGTCAACATCCCACAGCCCA...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR TCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAGTTCTGCAGTTTGGGTaGCGGACTGAACGTGTGCAG +
Preference number: 2 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEVLQFG*RTERVQ
Trigger: CTGCACACGTTCAGTCCGTCACCCAAACTGCAGAAC...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTTCTGCTCAGGGCTGCTaGCGACCGGATCCTCTCCTT +
Preference number: 2 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGSAQGC*RPDPLL
Trigger: AAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGA...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGTCTGCTCAGGGCTGCTaGCGACCGGATCCTCTCCTT +
Preference number: 2 (lower is better)
Translates to: AHLPGARPGWLKIASIEMSAQGC*RPDPLL
Trigger: AAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGA...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTACACGGAACGGCTTCTaGCTTTCCTCACGGAACCAG +
Preference number: 2 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRTRNGF*LSSRNQ
Trigger: CTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGT...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp GCCGAGGCTGAGTTCTGCAGTTTGGGTGACGGACTGAACGTGTGCAGGACACCTTGGCGGCCGACATCCTaGCTGCTTGTGTCTCCAGTA +
Preference number: 2 (lower is better)
Translates to: AEAEFCSLGDGLNVCRTPWRPTS*LLVSPV
Trigger: TACTGGAGACACAAGCAGGCAGGATGTCGGCCGCCA...AGGTGTCCTGCACACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCAGGAGCAAGGCCAGGGTaGCTTAAGATTGCGTCCATC +
Preference number: 2 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRAGARPG*LKIASI
Trigger: GATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCC...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCACATACGTATGTACGTaGGCACGGGACGCCCTCGCA +
Preference number: 2 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLTYVCT*ARDALA
Trigger: TGCGAGGGCGTCCCGTGCCCACGTACATACGTATGT...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CAA 90 bp AGCGCCTTCACAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTaGAGCGCCTTCTTCTGGTTGGTTGTCATGCAGTTCTCACACATG +
Preference number: 2 (lower is better)
Translates to: SAFTKAAFSRLVCST*SAFFWLVVMQFSHM
Trigger: CATGTGTGAGAACTGCATGACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTGAAGGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCTCTGAAAGCAAATCCTaGCAGCAACCCCTAGGTTTA +
Preference number: 2 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPSESKS*QQPLGL
Trigger: TAAACCTAGGGGTTGCTGTCAGGATTTGCTTTCAGA...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCCTGGATCTTGGAATaGAAGCCACCCTTCCCCAAT +
Preference number: 2 (lower is better)
Translates to: KPAQPARDTERLLPFLTEPWILE*KPPFPN
Trigger: ATTGGGGAAGGGTGGCTTTCATTCCAAGATCCAGGG...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATCCTGTGCTGGAATGTTaGCTAATGCTGTGGATTTGC +
Preference number: 2 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDPVLEC*LMLWIC
Trigger: GCAAATCCACAGCATTAGGCAACATTCCAGCACAGG...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR GCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGGGGGCCGTGCCCTGCTaGAGGAGCCGCTGCTCAATC +
Preference number: 2 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKGAVPC*RSRCSI
Trigger: GATTGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCC...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR GCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCGACGGACTGAACGTGTaGAGGACACCTCGGGGCGTC +
Preference number: 2 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCDGLNV*RTPRGV
Trigger: GACGCCCCGAGGTGTCCTGCACACGTTCAGTCCGTC...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCACTTATAGATCGCCATaGGAAGGCAGTCAAAGACTG +
Preference number: 2 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPTYRSP*EGSQRL
Trigger: CAGTCTTTGACTGCCTTCCCATGGCGATCTATAAGT...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCCAGAACAAGCAGCAATaGAGGCGTTCAGCTGGAGCG +
Preference number: 2 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLQNKQQ*RRSAGA
Trigger: CGCTCCAGCTGAACGCCTCCATTGCTGCTTGTTCTG...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp GGATCATGTCCAGGAGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGCGCCTTCTTCTGGTTaGTTGTCATGCAGTTCTCAC +
Preference number: 2 (lower is better)
Translates to: GSCPGGTLAGGPRPRSSCAPSSG*LSCSSH
Trigger: GTGAGAACTGCATGACAACCAACCAGAAGAAGGCGC...ACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCTGGACATGATCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAATGTAGCAGTTGTGTTTaGAGGCGGTGGCCCTACAAA +
Preference number: 2 (lower is better)
Translates to: KPAQPARDTERLLPFLTECSSCV*RRWPYK
Trigger: TTTGTAGGGCCACCGCCTTCAAACACAACTGCTACA...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR TCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCGGGCAGCAGTCCATATaGACTCACAAGGATGGGTTG +
Preference number: 2 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLGQQSI*THKDGL
Trigger: CAACCCATCCTTGTGAGTTCATATGGACTGCTGCCC...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp GAAATCCTGACATCTGTGCGCAGCGGCTCGCCGCACACCTGGACGGCACCTCCTGCCCTGATGAAACTTTaGAGCCAAGAATTGAGGTCT +
Preference number: 2 (lower is better)
Translates to: EILTSVRSGSPHTWTAPPALMKL*SQELRS
Trigger: AGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGC...AGGAGGTGCCGTCCAGGTGTGCGGCGAGCCGCTGCGCACAGATGTCAGGATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGCCCTGATGAAACTTTaGAGCCAAGAATTGAGGTCT +
Preference number: 2 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDALMKL*SQELRS
Trigger: AGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGC...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCCTGATGAAACTTTaGAGCCAAGAATTGAGGTCT +
Preference number: 2 (lower is better)
Translates to: PSHWHEAGPACKRHGTASALMKL*SQELRS
Trigger: AGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGC...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CGCCTTCACAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTGCCCTGATGAAACTTTaGAGCCAAGAATTGAGGTCT +
Preference number: 2 (lower is better)
Translates to: RLHKGGLQPAGVLHLERLALMKL*SQELRS
Trigger: AGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGC...AAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTGAAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTAAGGCAGTCAAAGACTaGGAGCCTAAGACAGGGAAA +
Preference number: 2 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPKAVKD*EPKTGK
Trigger: TTTCCCTGTCTTAGGCTCCCAGTCTTTGACTGCCTT...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCAGGCTCGCCGCACACCTaGACGGCACCTCCTGACCTG +
Preference number: 2 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSGSPHT*TAPPDL
Trigger: CAGGTCAGGAGGTGCCGTCCAGGTGTGCGGCGAGCC...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCACACACGACAGGAGCCTaGGGGTTAAATGAGCCTTTA +
Preference number: 2 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPHTTGA*GLNEPL
Trigger: TAAAGGCTCATTTAACCCCCAGGCTCCTGTCGTGTG...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACACCTTCTGGGAGGAGCTaGAAGATCTGGCCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTPSGRS*KIWPLS
Trigger: TGACAGGGGCCAGATCTTCCAGCTCCTCCCAGAAGG...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp TCGGCTTGCTGGAGACTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTAGGTCTTCTGGGCGGTaGCTTCCTTTTGTATTTGAC +
Preference number: 2 (lower is better)
Translates to: SACWRLGRGDHRGHTSGGRSSGR*LPFVFD
Trigger: GTCAAATACAAAAGGAAGCCACCGCCCAGAAGACCT...ACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR GCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGAGGTCTTGCCTCTaGAGCATGGCCGGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCLRSCL*SMAGAC
Trigger: GCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAA...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR GCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACAACACGGAACGGCTTCTaGCTTTCCTCACGGAACCAG +
Preference number: 2 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTTRNGF*LSSRNQ
Trigger: CTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGT...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAAAAGGCAGTCAAAGACTaGGAGCCTAAGACAGGGAAA +
Preference number: 2 (lower is better)
Translates to: KPAQPARDTERLLPFLTEKAVKD*EPKTGK
Trigger: TTTCCCTGTCTTAGGCTCCCAGTCTTTGACTGCCTT...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCACTTATAGATCGCCATaGGAAGGCAGTCAAAGACTG +
Preference number: 2 (lower is better)
Translates to: PVHAHLPGARPGWLKIASTYRSP*EGSQRL
Trigger: CAGTCTTTGACTGCCTTCCCATGGCGATCTATAAGT...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCAGTTTCCAGGTGCTGTTaGAGGTTCATGTCACAGGTA +
Preference number: 2 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPVSRCC*RFMSQV
Trigger: TACCTGTGACATGAACCTCCAACAGCACCTGGAAAC...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCATTGAGCGCCTTCTTCTaGTTGGTTGTCATGCAGTTC +
Preference number: 2 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRALSAFF*LVVMQF
Trigger: GAACTGCATGACAACCAACCAGAAGAAGGCGCTCAA...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR TCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTTGTAGCAGTTGTGTTTaGAGGCGGTGGCCCTACAAA +
Preference number: 2 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGCSSCV*RRWPYK
Trigger: TTTGTAGGGCCACCGCCTTCAAACACAACTGCTACA...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR TCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTAGCCTGGGGGTTAAATaGGCCTTTATTAGAATGTTG +
Preference number: 2 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPSLGVK*AFIRML
Trigger: CAACATTCTAATAAAGGCTCATTTAACCCCCAGGCT...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCAGCCCTGATGAAACTTTaGAGCCAAGAATTGAGGTCT +
Preference number: 2 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPALMKL*SQELRS
Trigger: AGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGC...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATACCCCCTCCAGCTTTCTaGTCAGGGCTGCTGCCGACC +
Preference number: 2 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIPPPAF*SGLLPT
Trigger: GGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTATTAAAGTCCCTAACTaGATGGGTAGGAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPIKVPN*MGRKTR
Trigger: CCTGGTTTTCCTACCCATGCAGTTAGGGACTTTAAT...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTCACACGACAGGAGCCTaGGGGTTAAATGAGCCTTTA +
Preference number: 2 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGHTTGA*GLNEPL
Trigger: TAAAGGCTCATTTAACCCCCAGGCTCCTGTCGTGTG...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CAA 90 bp TGTTGGAGGTTCATGTCACAGGTAACAGGGGACAGTTACAATCAGTaGGGCTGGGGGCTCCCACATTCTGACGGCTTGCAGGAACCTGAT +
Preference number: 2 (lower is better)
Translates to: CWRFMSQVTGDSYNQ*GWGLPHSDGLQEPD
Trigger: ATCAGGTTCCTGCAAGCCGTCAGAATGTGGGAGCCCCCAGCCCAACTGATTGTAACTGTCCCCTGTTACCTGTGACATGAACCTCCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR GCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATACGCTGGCCTTGCCCATaGGCATCACAGTGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIRWPCP*ASQCPG
Trigger: CCCTGGACACTGTGATGCGCATGGGCAAGGCCAGCG...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR TCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTTCTGAAAGCAAATCCTaGCAGCAACCCCTAGGTTTA +
Preference number: 2 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGSESKS*QQPLGL
Trigger: TAAACCTAGGGGTTGCTGTCAGGATTTGCTTTCAGA...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CAA 90 bp CCTGTCTACAGAGCAGCTGACAGAGGGAACCGTTTCCAGGTGCTGTaGGAGGTTCATGTCACAGGTAACAGGGGACAGTTACAATCAGTT +
Preference number: 2 (lower is better)
Translates to: PVYRAADRGNRFQVL*EVHVTGNRGQLQSV
Trigger: AACTGATTGTAACTGTCCCCTGTTACCTGTGACATGAACCTCCAACAGCACCTGGAAACGGTTCCCTCTGTCAGCTGCTCTGTAGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCACTTATAGATCGCCATaGGAAGGCAGTCAAAGACTG +
Preference number: 2 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLTYRSP*EGSQRL
Trigger: CAGTCTTTGACTGCCTTCCCATGGCGATCTATAAGT...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATACAGAACAAGCAGCAATaGAGGCGTTCAGCTGGAGCG +
Preference number: 2 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIQNKQQ*RRSAGA
Trigger: CGCTCCAGCTGAACGCCTCCATTGCTGCTTGTTCTG...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATAGGGCTGGAGCTCAATTaGAACCAGTGGAGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIGLELN*NQWSPE
Trigger: TTCTGGGCTCCACTGGTTCCAATTGAGCTCCAGCCC...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR TCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTATCCTCGTCTGCCTATaGGGCGGCACCAGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLILVCL*GGTSPL
Trigger: TAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGAT...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR GCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATACAAGAATTGAGGTCTTaGCTCTGCAGCATGGCCGGT +
Preference number: 2 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIQELRS*LCSMAG
Trigger: ACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTG...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCAGGAGCCCAGAACTCATaGAGACATACGTATGTACGT +
Preference number: 2 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSGAQNS*RHTYVR
Trigger: ACGTACATACGTATGTCTCCATGAGTTCTGGGCTCC...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR TCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGGCTTCCTTTTGTATTTaGCTCTGCCGCAACTTTTTC +
Preference number: 2 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKASFCI*LCRNFF
Trigger: GAAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGC...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR CAA 90 bp TGCCTTCACCTGGAACATCATAAACGTCATAATACAACAACCCGCTaGGGGCTTATCGTAGAGGTTATGCTGCAAGGAACTGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: CLHLEHHKRHNTTTR*GLIVEVMLQGTERK
Trigger: TTTCCTTTCAGTTCCTTGCAGCATAACCTCTACGATAAGCCCCAAGCGGGTTGTTGTATTATGACGTTTATGATGTTCCAGGTGAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR GCA 72 bp TCTGTCAGTCAGTCACGGGGGCGGGCCGGCCGTCCCTaGCAGGGGCTGTGGCACCATGAGCCGCCCACCCTC +
Preference number: 3 (lower is better)
Translates to: SVSQSRGRAGRP*QGLWHHEPPTL
Trigger: GAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCCGCCCCCGTGACTGACTGACAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCCCCCGGGCGCTGGCCTaGCCCATGCGCATCACAGTG +
Preference number: 3 (lower is better)
Translates to: RAASAIPASVSQSRGRAGPRALA*PMRITV
Trigger: CACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGGG...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR GCA 72 bp GCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTaGATCTGTCAGTCAGTCACGGGGGCGGGCCGGCCG +
Preference number: 3 (lower is better)
Translates to: AFSWSEGCLGHP*ICQSVTGAGRP
Trigger: CGGCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGGCCGGTGCTTGCTCTaGGGGCGGGCACGGTGTCTT +
Preference number: 3 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPGRCLL*GRARCL
Trigger: AAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCC...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCGGCCGCCTGTCGGCTaGCTGGAGACTCGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLRPPVG*LETRQR
Trigger: CCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCG...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR TCA 72 bp GCGCAGCGGCTCGCCGCACACCTGGACGGCACCTCCTaGCCTGCACACACCTGTGCACGCTCACCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: AQRLAAHLDGTS*PAHTCARSPPR
Trigger: CCTGGGAGGTGAGCGTGCACAGGTGTGTGCAGGTCAGGAGGTGCCGTCCAGGTGTGCGGCGAGCCGCTGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTACCCCGGGCGCTGGCCTaGCCCATGCGCATCACAGTG +
Preference number: 3 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLPRALA*PMRITV
Trigger: CACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGGG...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp GGGCCTGGCTCGCACTATTTCCACGTGGCTGACTGGGGGATGGAGCGGGGTGGGCGGCCGCCTGTCGGCTaGCTGGAGACTCGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: GPGSHYFHVADWGMERGGRPPVG*LETRQR
Trigger: CCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCG...CCCACCCCGCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCGAGCCAGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp GTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTGTTGCGCAGCGCCAGCTaGGCGGCCGCCTGTCGGCTT +
Preference number: 3 (lower is better)
Translates to: VPPVLRGVFFQLEVALPLLRSAS*AAACRL
Trigger: AAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCAA...CAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp GGCTCGGCCTTGGCCTGTGCAGGGGCCGTGCCCTGCTaGAGGAGCCGCTGCTCAATCTCCTGTTCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: GSALACAGAVPC*RSRCSISCSCC
Trigger: GCAGCAGGAACAGGAGATTGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCCTGCACAGGCCAAGGCCGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR CCA 72 bp GCGCAGCGCCAGCTTGGCGGCCGCCTGTCGGCTTGCTaGAGACTCGGCAGAGGTGACCACAGAGGCCACACT +
Preference number: 3 (lower is better)
Translates to: AQRQLGGRLSAC*RLGRGDHRGHT
Trigger: AGTGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp GGCCAGGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTACGAGCAGGCTGGTGTaGGGAACATTGGCGACGCGG +
Preference number: 3 (lower is better)
Translates to: GQVGEEGARLPRGLARTITSRLV*GTLATR
Trigger: CCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGT...AATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR GCA 72 bp TTTGCGCAGCGCCAGCTTGGCGGCCGCCTGTCGGCTTaGTGGAGACTCGGCAGAGGTGACCACAGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: FAQRQLGGRLSA*WRLGRGDHRGH
Trigger: GTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR CCA 72 bp CACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTaGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: HGVFPSQRRVVQ*VLLDQGPGGGG
Trigger: TCCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR CCA 72 bp AGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTaGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGG +
Preference number: 3 (lower is better)
Translates to: RSCLCSMAGACS*GGHGVFPSQRR
Trigger: CCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp CAGGAGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGTCTTCTCCAGCTGTTaGCGCAGCGCCAGCTTGGCG +
Preference number: 3 (lower is better)
Translates to: QEVLSLAVHGRGALVHRQVFSSC*RSASLA
Trigger: CGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGAC...CTGGCGGTGCACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR TCA 72 bp ACGCCTGCTGCCCACCTCGGACCAGGGGCGGGGGTATaGCACTGCCGGGCATCCGAGCTGAAGAGGTCTTCT +
Preference number: 3 (lower is better)
Translates to: TPAAHLGPGAGV*HCRASELKRSS
Trigger: AGAAGACCTCTTCAGCTCGGATGCCCGGCAGTGTCATACCCCCGCCCCTGGTCCGAGGTGGGCAGCAGGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR CCA 72 bp GTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTaGGCTGACAAACGCAAGGGTCCCGCCTGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: VHGRGALVHRQA*ADKRKGPACAE
Trigger: CTCAGCACAGGCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp CGGGACAGCACAGTGGCGGCCGACATCCTGCCTGCTTGTGTCTCCAGTAGGTTCGGCCGGTGCTTGCTCTaGGGGCGGGCACGGTGTCTT +
Preference number: 3 (lower is better)
Translates to: RDSTVAADILPACVSSRFGRCLL*GRARCL
Trigger: AAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCC...GAACCTACTGGAGACACAAGCAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCCCGGGCGCTGGCCTaGCCCATGCGCATCACAGTG +
Preference number: 3 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRPRALA*PMRITV
Trigger: CACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGGG...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACTGGTGTTGGGAACATaGGCGACGCGGATGAGGCCC +
Preference number: 3 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRLVLGT*ATRMRP
Trigger: GGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAG...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR TCA 72 bp TGGCCGAGGCTGAGTTCTGCAGTTTGGGTGACGGACTaGACGTGTGCAGGACACCTCGGGGCGTCGTGGCCG +
Preference number: 3 (lower is better)
Translates to: WPRLSSAVWVTD*TCAGHLGASWP
Trigger: CGGCCACGACGCCCCGAGGTGTCCTGCACACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp GGGACGCCCTCGCACTGGCATGAAGCCGGCCCAGCCTaGAAGAGACACGGAACGGCTTCTGCCTTTCCTCAC +
Preference number: 3 (lower is better)
Translates to: GTPSHWHEAGPA*KRHGTASAFPH
Trigger: GTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGGCGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR GCA 72 bp CTCCCGCCAGCGGCACGTGAAGTCCGTCTTGCACTGTaGACACATGTAGGGCTCCCGGGACAGCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: LPPAAREVRLAL*THVGLPGQHSG
Trigger: GCCACTGTGCTGTCCCGGGAGCCCTACATGTGTGCACAGTGCAAGACGGACTTCACGTGCCGCTGGCGGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp CCCTGCTGCAGGAGCCGCTGCTCAATCTCCTGTTCCTaGTGCAGCGCCTTCACAAAGGCGGCCTTCAGCCGG +
Preference number: 3 (lower is better)
Translates to: PCCRSRCSISCS*CSAFTKAAFSR
Trigger: CCGGCTGAAGGCCGCCTTTGTGAAGGCGCTGCAGCAGGAACAGGAGATTGAGCAGCGGCTCCTGCAGCAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp GCTGAGTTCTGCAGTTTGGGTGACGGACTGAACGTGTaGAGGACACCTCGGGGCGTCGTGGCCGAACCCCGG +
Preference number: 3 (lower is better)
Translates to: AEFCSLGDGLNV*RTPRGVVAEPR
Trigger: CCGGGGTTCGGCCACGACGCCCCGAGGTGTCCTGCACACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp GGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTaGCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGG +
Preference number: 3 (lower is better)
Translates to: GASSSSWRWRCP*RRSRFSQNVCR
Trigger: CCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp TACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTaGACCGCCAGGCTTGGGCTGACAAACGCAAGGGTC +
Preference number: 3 (lower is better)
Translates to: YSRWRSTAEELL*TARLGLTNARV
Trigger: GACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAAGGCCGGTGCTTGCTCTaGGGGCGGGCACGGTGTCTT +
Preference number: 3 (lower is better)
Translates to: KPAQPARDTERLLPFLTEGRCLL*GRARCL
Trigger: AAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCC...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAGGCCGGTGCTTGCTCTaGGGGCGGGCACGGTGTCTT +
Preference number: 3 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEGRCLL*GRARCL
Trigger: AAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCC...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGCCAAGAATTGAGGTCTaGCCTCTGCAGCATGGCCGG +
Preference number: 3 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPPRIEV*PLQHGR
Trigger: CCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGG...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp GAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTaGTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAG +
Preference number: 3 (lower is better)
Translates to: ELRSCLCSMAGA*SWGGHGVFPSQ
Trigger: CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp CCCAGCGGGGCTGCCACTGGGTTGCCTCATTCCCTCTaGCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAG +
Preference number: 3 (lower is better)
Translates to: PSGAATGLPHSL*PEAFASPRSVE
Trigger: CTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCAACCCAGTGGCAGCCCCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 72 bp CATACGTATGTACGTGGGCACGGGACGCCCTCGCACTaGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGA +
Preference number: 3 (lower is better)
Translates to: HTYVRGHGTPSH*HEAGPACKRHG
Trigger: TCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGGCGTCCCGTGCCCACGTACATACGTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCCCAAGAATTGAGGTCTaGCCTCTGCAGCATGGCCGG +
Preference number: 3 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIPRIEV*PLQHGR
Trigger: CCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGG...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTCCCCGGGCGCTGGCCTaGCCCATGCGCATCACAGTG +
Preference number: 3 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGPRALA*PMRITV
Trigger: CACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGGG...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CAA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCTTTGCAGCCAAGAATaGAGGTCTTGCCTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQLCSQE*RSCLCS
Trigger: GCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAG...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCGTGGGCTGTGGGATGTaGACGAGCAGGCTGGTGTTG +
Preference number: 3 (lower is better)
Translates to: PVHAHLPGARPGWLKIASVGCGM*TSRLVL
Trigger: CAACACCAGCCTGCTCGTCAACATCCCACAGCCCAC...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR CAA 90 bp GGCCAGGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTAGCGCCTTCTTCTGGTaGGTTGTCATGCAGTTCTCA +
Preference number: 3 (lower is better)
Translates to: GQVGEEGARLPRGLARTISAFFW*VVMQFS
Trigger: TGAGAACTGCATGACAACCAACCAGAAGAAGGCGCT...AATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp GTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTGGGCTGACAAACGCAAGCTGGTGTGCTCCACCTaGAGCGCCTTCTTCTGGTTG +
Preference number: 3 (lower is better)
Translates to: VHGRGALVHRQAWADKRKLVCST*SAFFWL
Trigger: CAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAG...CTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp CCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTaGTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAG +
Preference number: 3 (lower is better)
Translates to: PRIEVLPLQHGR*LLLGRARCLPE
Trigger: CTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp CAAGCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTaGCTCGGCCATCCCTGCATCTGTCAGTCAGTCACG +
Preference number: 3 (lower is better)
Translates to: QAAMEAFSWSEG*LGHPCICQSVT
Trigger: CGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR CCA 72 bp GGGTCTCCAGAACAAGCAGCAATGGAGGCGTTCAGCTaGAGCGAGGGCTGCCTCGGCCATCCCTGCATCTGT +
Preference number: 3 (lower is better)
Translates to: GSPEQAAMEAFS*SEGCLGHPCIC
Trigger: ACAGATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGCTTGTTCTGGAGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR CCA 72 bp TGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATaGGGCCGACCCTCTCCCTTTCGAGGGGCAGCAGTC +
Preference number: 3 (lower is better)
Translates to: CTLSLMECSLGT*GRPSPFRGAAV
Trigger: GACTGCTGCCCCTCGAAAGGGAGAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR TCA 72 bp GGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATaGGGCGGCACCAGCCCCCTAGCCCTGATGAAACTT +
Preference number: 3 (lower is better)
Translates to: GKGPPAMILVCL*GGTSPLALMKL
Trigger: AAGTTTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR TCA 72 bp ACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTaGGCGGAGGTGGCTGTTGTCCCCTTCAGTGATGCT +
Preference number: 3 (lower is better)
Translates to: TTEATLVGVELA*AEVAVVPFSDA
Trigger: AGCATCACTGAAGGGGACAACAGCCACCTCCGCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR TCA 72 bp GGTTCTGCACCACCTCCTCCAGGCCGACCAGGTAGATaGACTCGTTGTTGGCGGCGCTGGGCAGGAAGTTCA +
Preference number: 3 (lower is better)
Translates to: GSAPPPPGRPGR*TRCWRRWAGSS
Trigger: TGAACTTCCTGCCCAGCGCCGCCAACAACGAGTTCATCTACCTGGTCGGCCTGGAGGAGGTGGTGCAGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR TCA 72 bp CGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTaGCCAGGGCTGTGGCCGAGGCTGAGTTCTGCAGTT +
Preference number: 3 (lower is better)
Translates to: RSRFSQNVCRSC*PGLWPRLSSAV
Trigger: AACTGCAGAACTCAGCCTCGGCCACAGCCCTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp ATCAGTTGGGCTGGGGGCTCCCACATTCTGACGGCTTaGAGGAACCTGATCCTGGTAGGGCTCTCGGGACCA +
Preference number: 3 (lower is better)
Translates to: ISWAGGSHILTA*RNLILVGLSGP
Trigger: TGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGCCGTCAGAATGTGGGAGCCCCCAGCCCAACTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR GCA 72 bp AGCGCCTTCACAAAGGCGGCCTTCAGCCGGCTGGTGTaGTCCACCTTGAGCGCCTTCTTCTGGTTGGTTGTC +
Preference number: 3 (lower is better)
Translates to: SAFTKAAFSRLV*STLSAFFWLVV
Trigger: GACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTGAAGGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp TTACTCCAGTCGCGGGCCTCTCCTGAGCGGAACGCCAACTTACGCCGGGGTTTTCCAAGAATTGAGGTCTaGCCTCTGCAGCATGGCCGG +
Preference number: 3 (lower is better)
Translates to: LLQSRASPERNANLRRGFPRIEV*PLQHGR
Trigger: CCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGG...AAAACCCCGGCGTAAGTTGGCGTTCCGCTCAGGAGAGGCCCGCGACTGGAGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609040.5
3UTR-3UTR CAA 90 bp GAAATCCTGACATCTGTGCGCAGCGGCTCGCCGCACACCTGGACGGCACCTCCTCTTTGCAGCCAAGAATaGAGGTCTTGCCTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: EILTSVRSGSPHTWTAPPLCSQE*RSCLCS
Trigger: GCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAG...AGGAGGTGCCGTCCAGGTGTGCGGCGAGCCGCTGCGCACAGATGTCAGGATTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp GCTTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTTTGCAGCCAAGAATaGAGGTCTTGCCTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: ACRNLILVGLSGPGPRQCLCSQE*RSCLCS
Trigger: GCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAG...GCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CAA 90 bp CTTCCACGGGGCCTGGCTCGCACTATTTCCACGTGGCTGACTGGGGGATGGAGCCTTTGCAGCCAAGAATaGAGGTCTTGCCTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: LPRGLARTISTWLTGGWSLCSQE*RSCLCS
Trigger: GCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAG...GCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAACTGGTGTGCTCCACCTaGAGCGCCTTCTTCTGGTTG +
Preference number: 3 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDELVCST*SAFFWL
Trigger: CAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAG...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR TCA 72 bp GAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATaGGGTCAGGACGGCCATAGCTGTGGGAGGTTCCAA +
Preference number: 3 (lower is better)
Translates to: EGWFLVTVEFLG*GQDGHSCGRFQ
Trigger: TTGGAACCTCCCACAGCTATGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 72 bp ATCCCCAGCCACTGCATAGAACTGAGGTTGGTTCGCTaGGGAGGGCTTTCAGTGGGAAGAAGCCAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: IPSHCIELRLVR*GGLSVGRSQPG
Trigger: CCCAGGCTGGCTTCTTCCCACTGAAAGCCCTCCCCAGCGAACCAACCTCAGTTCTATGCAGTGGCTGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 72 bp AGGACGGCCATAGCTGTGGGAGGTTCCAAGGGCACTTaGCCATTCCAAACCCTACCCCCAACCTCCCCTACA +
Preference number: 3 (lower is better)
Translates to: RTAIAVGGSKGT*PFQTLPPTSPT
Trigger: TGTAGGGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAGCTATGGCCGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CAA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCAGCATGGCCGGTGCTaGCTCTTGGGGCGGGCACGG +
Preference number: 3 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKQHGRC*LLGRAR
Trigger: CCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCAGGGCTGGAGCTCAATaGGAACCAGTGGAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLRAGAQ*EPVEPR
Trigger: TCTGGGCTCCACTGGTTCCAATTGAGCTCCAGCCCT...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CAA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAATGCATAGAACTGAGGTaGGTTCGCTGGGGAGGGCTT +
Preference number: 3 (lower is better)
Translates to: KPAQPARDTERLLPFLTECIELR*VRWGGL
Trigger: AAGCCCTCCCCAGCGAACCAACCTCAGTTCTATGCA...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CAA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAAACTCACAAGGATGGGTaGACAGCCATCAGCCCTGGA +
Preference number: 3 (lower is better)
Translates to: KPAQPARDTERLLPFLTETHKDG*TAISPG
Trigger: TCCAGGGCTGATGGCTGTCAACCCATCCTTGTGAGT...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CAA 90 bp AAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGGGCGGTGGCTTCCTTTaGTATTTGACTCTGCCGCAA +
Preference number: 3 (lower is better)
Translates to: KAAFSRLVCSTLSAFFWLGGGFL*YLTLPQ
Trigger: TTGCGGCAGAGTCAAATACAAAAGGAAGCCACCGCC...CAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR CAA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCGTCTTCTCCAGCTGTTaGCGCAGCGCCAGCTTGGCG +
Preference number: 3 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLVFSSC*RSASLA
Trigger: CGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGAC...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp GGTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTCCTTCTTCTGGTTGGTaGTCATGCAGTTCTCACACA +
Preference number: 3 (lower is better)
Translates to: GPACAEGRLLPVGGGAALPSSGW*SCSSHT
Trigger: TGTGTGAGAACTGCATGACAACCAACCAGAAGAAGG...AAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTCCAAGAATTGAGGTCTaGCCTCTGCAGCATGGCCGG +
Preference number: 3 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGPRIEV*PLQHGR
Trigger: CCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGG...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CAA 90 bp TCGGCTTGCTGGAGACTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTCCCTGTGCTGGAATGTaGCCTAATGCTGTGGATTTG +
Preference number: 3 (lower is better)
Translates to: SACWRLGRGDHRGHTSGGPCAGM*PNAVDL
Trigger: CAAATCCACAGCATTAGGCAACATTCCAGCACAGGG...ACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR-3UTR CAA 90 bp GCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGGGCTGTCCTTCTTCTGGTTGGTaGTCATGCAGTTCTCACACA +
Preference number: 3 (lower is better)
Translates to: AGAHGSLRMSAGPADQGCPSSGW*SCSSHT
Trigger: TGTGTGAGAACTGCATGACAACCAACCAGAAGAAGG...ACAGCCCTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR TCA 72 bp GCCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATaGACTCACAAGGATGGGTTGACAGCCATCAGCCCT +
Preference number: 3 (lower is better)
Translates to: ADPLPFEGQQSI*THKDGLTAISP
Trigger: AGGGCTGATGGCTGTCAACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR TCA 72 bp CAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTaGGCGCCTTCTTCTGGTTGGTTGTCATGCAGTTCT +
Preference number: 3 (lower is better)
Translates to: QRRPSAGWCAPP*APSSGWLSCSS
Trigger: AGAACTGCATGACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
3UTR-3UTR CAA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACACCAAGAATTGAGGTCTaGCCTCTGCAGCATGGCCGG +
Preference number: 3 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTPRIEV*PLQHGR
Trigger: CCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGG...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR GCA 72 bp ATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTaGAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCAC +
Preference number: 3 (lower is better)
Translates to: MKLCSQELRSCL*SMAGACSWGGH
Trigger: GTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp GCCCTGATGAAACTTTGCAGCCAAGAATTGAGGTCTTaGCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGC +
Preference number: 3 (lower is better)
Translates to: ALMKLCSQELRS*LCSMAGACSWG
Trigger: GCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR GCA 72 bp AGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTaGCTTTCCTCACGGAACCAGTTTTTAAAGAGTGGG +
Preference number: 3 (lower is better)
Translates to: SRPSLQETRNGF*LSSRNQFLKSG
Trigger: CCCACTCTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR CCA 72 bp TGGAGCTCAATTGGAACCAGTGGAGCCCAGAACTCATaGAGACATACGTATGTACGTGGGCACGGGACGCCC +
Preference number: 3 (lower is better)
Translates to: WSSIGTSGAQNS*RHTYVRGHGTP
Trigger: GGGCGTCCCGTGCCCACGTACATACGTATGTCTCCATGAGTTCTGGGCTCCACTGGTTCCAATTGAGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCAAATACAACAACCCGCTaGGGGCTTATCGTAGAGGTT +
Preference number: 3 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPNTTTR*GLIVEV
Trigger: AACCTCTACGATAAGCCCCAAGCGGGTTGTTGTATT...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 72 bp TTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATaGGTTGACAGCCATCAGCCCTGGAGGAACAGCCAG +
Preference number: 3 (lower is better)
Translates to: FRGAAVHMNSQG*VDSHQPWRNSQ
Trigger: CTGGCTGTTCCTCCAGGGCTGATGGCTGTCAACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 72 bp TCACAGGTAACAGGGGACAGTTACAATCAGTTGGGCTaGGGGCTCCCACATTCTGACGGCTTGCAGGAACCT +
Preference number: 3 (lower is better)
Translates to: SQVTGDSYNQLG*GLPHSDGLQEP
Trigger: AGGTTCCTGCAAGCCGTCAGAATGTGGGAGCCCCCAGCCCAACTGATTGTAACTGTCCCCTGTTACCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR-3UTR CAA 90 bp GGATCATGTCCAGGAGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGGCTTCCTTTTGTATTaGACTCTGCCGCAACTTTTT +
Preference number: 3 (lower is better)
Translates to: GSCPGGTLAGGPRPRSSCGFLLY*TLPQLF
Trigger: AAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGCC...ACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCTGGACATGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR GCA 72 bp TCTACAGAGCAGCTGACAGAGGGAACCGTTTCCAGGTaGTGTTGGAGGTTCATGTCACAGGTAACAGGGGAC +
Preference number: 3 (lower is better)
Translates to: STEQLTEGTVSR*CWRFMSQVTGD
Trigger: GTCCCCTGTTACCTGTGACATGAACCTCCAACAGCACCTGGAAACGGTTCCCTCTGTCAGCTGCTCTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 72 bp GAGCAGCTGACAGAGGGAACCGTTTCCAGGTGCTGTTaGAGGTTCATGTCACAGGTAACAGGGGACAGTTAC +
Preference number: 3 (lower is better)
Translates to: EQLTEGTVSRCC*RFMSQVTGDSY
Trigger: GTAACTGTCCCCTGTTACCTGTGACATGAACCTCCAACAGCACCTGGAAACGGTTCCCTCTGTCAGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 72 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTaGCTTAAGATTGCGTCCATCGAAATGAATAGAAAA +
Preference number: 3 (lower is better)
Translates to: PVHAHLPGARPG*LKIASIEMNRK
Trigger: TTTTCTATTCATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR-3UTR CAA 90 bp GCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGGTTGTCTCAACAACACGAGTTTaGCTTCTTCTAACCTCAATT +
Preference number: 3 (lower is better)
Translates to: AFSRLVCSTLSAFFWLVVSTTRV*LLLTSI
Trigger: AATTGAGGTTAGAAGAAGCAAAACTCGTGTTGTTGA...GACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR TCA 72 bp GAAGAGGTCTTCTGGGCGGTGGCTTCCTTTTGTATTTaGCTCTGCCGCAACTTTTTCAACAACACGAGTTTT +
Preference number: 3 (lower is better)
Translates to: EEVFWAVASFCI*LCRNFFNNTSF
Trigger: AAAACTCGTGTTGTTGAAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGCCACCGCCCAGAAGACCTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR GCA 72 bp CTAACAGCTCAGGGTCGTAGGAGACAGGTATTTATTTaGCAGGCACACAGAAAAATGCGAGGAATAGAAATG +
Preference number: 3 (lower is better)
Translates to: LTAQGRRRQVFI*QAHRKMRGIEM
Trigger: CATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCTCCTACGACCCTGAGCTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CCA 72 bp CCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTaGAACATCATAAACGTCATAATACAACAACCCGCT +
Preference number: 3 (lower is better)
Translates to: PTPREVLNNAFT*NIINVIIQQPA
Trigger: AGCGGGTTGTTGTATTATGACGTTTATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGCTTCAGCACGGGGTGTaGGGCAGCGGTGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRLQHGV*GSGGLG
Trigger: GCCGAGCCCACCGCTGCCCCACACCCCGTGCTGAAG...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGCCCGCCAGCGGCACGTaGAGTCCGTCTTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRPASGT*SPSCTV
Trigger: CACAGTGCAAGACGGACTTCACGTGCCGCTGGCGGG...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGATCCTCGTCTGCCTATaGGGCGGCACCAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRILVCL*GGTSPL
Trigger: TAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGAT...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCCCTGTGCAGGGGCCGTaGCCTGCTGCAGGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: RAASAIPASVSQSRGRAGPVQGP*PAAGAA
Trigger: AGCGGCTCCTGCAGCAGGGCACGGCCCCTGCACAGG...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGGGGACGCCCTCGCACTaGCATGAAGCCGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLGTPSH*HEAGPA
Trigger: GGCTGGGCCGGCTTCATGCCAGTGCGAGGGCGTCCC...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGGGACGCCCTCGCACTaGCATGAAGCCGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPGTPSH*HEAGPA
Trigger: GGCTGGGCCGGCTTCATGCCAGTGCGAGGGCGTCCC...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGTCGGATCTGGCCCCCTaGTCAGACCCAGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRSDLAP*SDPADP
Trigger: TGGGTCAGCTGGGTCTGACCAGGGGGCCAGATCCGA...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCGGGGCCGTGCCCTGCTaGAGGAGCCGCTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: RAASAIPASVSQSRGRAGGAVPC*RSRCSI
Trigger: GATTGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCC...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGCCTGTGCAGGGGCCGTaGCCTGCTGCAGGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQPVQGP*PAAGAA
Trigger: AGCGGCTCCTGCAGCAGGGCACGGCCCCTGCACAGG...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCTTCAGCACGGGGTGTaGGGCAGCGGTGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGLQHGV*GSGGLG
Trigger: GCCGAGCCCACCGCTGCCCCACACCCCGTGCTGAAG...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGCACCTCGGGGCGTCGTaGCCGAACCCCGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRHLGAS*PNPGTA
Trigger: AGCTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTG...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGTGGCTGACTGGGGGATaGAGCGGGGTGGGATCATGT +
Preference number: 4 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRWLTGG*SGVGSC
Trigger: ACATGATCCCACCCCGCTCCATCCCCCAGTCAGCCA...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGCCCTGCCAGGGGCTGTaGCACCATGAGCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRPCQGL*HHEPPT
Trigger: GGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGG...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGGGGCATGACGACCTGTaGGCTCGCCTGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRGHDDL*ARLWPQ
Trigger: CTGGGGCCACAGGCGAGCTCACAGGTCGTCATGCCC...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTGGGCATGACGACCTGTaGGCTCGCCTGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGGHDDL*ARLWPQ
Trigger: CTGGGGCCACAGGCGAGCTCACAGGTCGTCATGCCC...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGTCGCGGGCCTCTCCTaGGCGGAACGCCAACTTACG +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPVAGLS*AERQLT
Trigger: CGTAAGTTGGCGTTCCGCTCAGGAGAGGCCCGCGAC...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGGGGTCCCGCCTGTGCTaGGGGGCGTCTTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLGSRLC*GASSSS
Trigger: ACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACCC...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGCCGCCAGGCTTGGGCTaGCAAACGCAAGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRPPGLG*QTQGSR
Trigger: GCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGG...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp TTGCGCAGCGCCAGCTTGGCGGCCGCCTGTCGGCTTGCTGGAGACTCGGCAGAGCTGGGGTGGGCTGTGTaGGGTGCGCATGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: LRSASLAAACRLAGDSAELGWAV*GAHVHG
Trigger: CCCGTGGACATGCGCACCTCACACAGCCCACCCCAG...CTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS-3UTR GCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGCCAGCCCTTCGCCTCTaGCCATGGCCATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQPALRL*PWPWPW
Trigger: CCACGGCCATGGCCATGGGCAGAGGCGAAGGGCTGG...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CGGACTGAACGTGTGCAGGACACCTCGGGGCGTCGTGGCCGAACCCCGGGACAGCCAGCCCTTCGCCTCTaGCCATGGCCATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RTERVQDTSGRRGRTPGQPALRL*PWPWPW
Trigger: CCACGGCCATGGCCATGGGCAGAGGCGAAGGGCTGG...CTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTGTCCTGCACACGTTCAGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GGCCAGGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTTCGAGGACGCCTGCTaGCCACCTCGGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GQVGEEGARLPRGLARTIFEDAC*PPRTRG
Trigger: GCCCCTGGTCCGAGGTGGGCAGCAGGCGTCCTCGAA...AATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCAGCTTCGAGGACGCCTaGTGCCCACCTCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: RAASAIPASVSQSRGRAGSFEDA*CPPRTR
Trigger: CCTGGTCCGAGGTGGGCAGCAGGCGTCCTCGAAGCT...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGGGCCGCCTGTCGGCTTaGTGGAGACTCGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLGRLSA*WRLGRG
Trigger: ACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCC...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGGTCCGTCTTGCACTGTaGACACATGTAGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRVRLAL*THVGLP
Trigger: CGGGAGCCCTACATGTGTGCACAGTGCAAGACGGAC...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGCCCGGGCGCTGGCCTTaGCCATGCGCATCACAGTGT +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLPGRWP*PCASQC
Trigger: ACACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGG...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCCGGGCCGGCCGTCCCTaGCAGGGGCTGTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPRAGRP*QGLWHH
Trigger: ATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCCG...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTGGGGCCCAGCGGGGCTaGCACTGGGTTGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGGAQRG*HWVASF
Trigger: GAATGAGGCAACCCAGTGGCAGCCCCGCTGGGCCCC...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGGCCCAGCGGGGCTaGCACTGGGTTGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQGAQRG*HWVASF
Trigger: GAATGAGGCAACCCAGTGGCAGCCCCGCTGGGCCCC...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGGGTGTGGGGCAGCGGTaGGCTCGGCCTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQGVGQR*ARPWPV
Trigger: CACAGGCCAAGGCCGAGCCCACCGCTGCCCCACACC...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGCCCGGGACAGCTGGCTaGAGGCCTGTAGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRPGTAG*RPVAQP
Trigger: GGGCTGTGCTACAGGCCTCCAGCCAGCTGTCCCGGG...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000609040.5
CDS-3UTR CCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGAGGAGGTACTCTCGCTaGCGGTCCACGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLRRYSR*RSTAEE
Trigger: CTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCT...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCGCCGGTGCTTGCTCTTaGGGCGGGCACGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RAASAIPASVSQSRGRAGAGACS*GGHGVF
Trigger: GAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGC...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGATGGAGGCGTTCAGCTaGAGCGAGGGCTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPMEAFS*SEGCLG
Trigger: GCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCAT...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGGGCTCGCCGCACACCTaGACGGCACCTCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRGSPHT*TAPPDL
Trigger: CAGGTCAGGAGGTGCCGTCCAGGTGTGCGGCGAGCC...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCCCAGGGGCGGGGGTATaGCACTGCCGGGCATCCGAG +
Preference number: 4 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIPGAGV*HCRASE
Trigger: CTCGGATGCCCGGCAGTGTCATACCCCCGCCCCTGG...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGGGTGGAGTTGGCCTaGGCGGAGGTGGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASGVELA*AEVAVV
Trigger: GACAACAGCCACCTCCGCTCAGGCCAACTCCACCCC...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCGTCTGCCGGTCCTGCTaGCCAGGGCTGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIVCRSC*PGLWPR
Trigger: CCTCGGCCACAGCCCTGGTCAGCAGGACCGGCAGAC...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGTCCCGCCTGTGCTaGGGGGCGTCTTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQGSRLC*GASSSS
Trigger: ACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACCC...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCCAGCCCTTCGCCTCTaGCCATGGCCATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQPALRL*PWPWPW
Trigger: CCACGGCCATGGCCATGGGCAGAGGCGAAGGGCTGG...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GGACACCTCGGGGCGTCGTGGCCGAACCCCGGGACAGCTGGCTGGAGGCCTGCTGTCTCCAGTAGGTTCTaGACCACCTCCTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GHLGASWPNPGTAGWRPAVSSRF*TTSSRP
Trigger: CGGCCTGGAGGAGGTGGTGCAGAACCTACTGGAGAC...AGCAGGCCTCCAGCCAGCTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp GGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACGTGGGGGCCGTGCCCTGCTaGAGGAGCCGCTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: GGGGSPSSTGPGSHYFHVGAVPC*RSRCSI
Trigger: GATTGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCC...CACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTGGCAGGGGCCGTGCCCTaGTGCAGGAGCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VPPVLRGVFFQLEVALPLAGAVP*CRSRCS
Trigger: TGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCCTGC...CAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTAGGTGGCGCTGCCCTTaGCGGCGCTCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLRWRCP*RRSRFS
Trigger: AGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCT...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GGGCCTGGCTCGCACTATTTCCACGTGGCTGACTGGGGGATGGAGCGGGGTGGGAGTTGGAGGTGGCGCTaGCCTTGCCGGCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: GPGSHYFHVADWGMERGGSWRWR*PCRRSR
Trigger: CCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCAACT...CCCACCCCGCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCGAGCCAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TTGCGCAGCGCCAGCTTGGCGGCCGCCTGTCGGCTTGCTGGAGACTCGGCAGAGGCCGAGGAGCTCTTGTaGACCGCCAGGCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRSASLAAACRLAGDSAEAEELL*TARLGL
Trigger: CAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGC...CTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCCCGGGCGCTGGCCTTaGCCATGCGCATCACAGTGT +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLPGRWP*PCASQC
Trigger: ACACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGG...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGCCCGGGCGCTGGCCTTaGCCATGCGCATCACAGTGT +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQPGRWP*PCASQC
Trigger: ACACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGG...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGCTTCGCCTCTGCCCATaGCCATGGCCGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQLRLCP*PWPWPL
Trigger: CAGAGGCCACGGCCATGGCCATGGGCAGAGGCGAAG...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGCAAGCGGGGGAGGGGTaGTCACGGTGCTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQQAGEG*SRCSQQ
Trigger: CTGTTGGGAGCACCGTGACCACCCCTCCCCCGCTTG...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGCCGGTGCTTGCTCTTaGGGCGGGCACGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASAGACS*GGHGVF
Trigger: GAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGC...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTGCCCTGCCAGGGGCTGTaGCACCATGAGCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: VPPVLRGVFFQLEVALPLPCQGL*HHEPPT
Trigger: GGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGG...CAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCGGGACGCCCTCGCACTaGCATGAAGCCGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPGTPSH*HEAGPA
Trigger: GGCTGGGCCGGCTTCATGCCAGTGCGAGGGCGTCCC...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGTCGGATCTGGCCCCCTaGTCAGACCCAGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPSDLAP*SDPADP
Trigger: TGGGTCAGCTGGGTCTGACCAGGGGGCCAGATCCGA...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGTCGGATCTGGCCCCCTaGTCAGACCCAGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLSDLAP*SDPADP
Trigger: TGGGTCAGCTGGGTCTGACCAGGGGGCCAGATCCGA...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATAGCTGGAGCTGGGGCTaGGGGCCGGCAGGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDSWSWG*GPAGAA
Trigger: AGCCGCACCTGCCGGCCCCCAGCCCCAGCTCCAGCT...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGCTTCACCGAGGTCCGTaGAGTACAGGTAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRLHRGP*STGKTR
Trigger: CCTGGTCTTACCTGTACTCCACGGACCTCGGTGAAG...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACCCCGGGACAGCACAGTaGCGGCCGACATCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GGGGGSPSSTGPGSHYFHPGTAQ*RPTSCL
Trigger: CAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCGGG...GTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGAACCCCGGGACAGCTaGCTGGAGGCCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQEPRDS*LEACFS
Trigger: GCTGAAGCAGGCCTCCAGCCAGCTGTCCCGGGGTTC...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCCCAGGGGCGGGGGTATaGCACTGCCGGGCATCCGAG +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTPGAGV*HCRASE
Trigger: CTCGGATGCCCGGCAGTGTCATACCCCCGCCCCTGG...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTGAGCCCAGGGGCGGGGGTATaGCACTGCCGGGCATCCGAG +
Preference number: 4 (lower is better)
Translates to: LGRGDHRGHTSGGGVGLSPGAGV*HCRASE
Trigger: CTCGGATGCCCGGCAGTGTCATACCCCCGCCCCTGG...GCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGGGGGTGGAGTTGGCCTaGGCGGAGGTGGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQGVELA*AEVAVV
Trigger: GACAACAGCCACCTCCGCTCAGGCCAACTCCACCCC...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp GGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACGTGGGGGTGGAGTTGGCCTaGGCGGAGGTGGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GGGGSPSSTGPGSHYFHVGVELA*AEVAVV
Trigger: GACAACAGCCACCTCCGCTCAGGCCAACTCCACCCC...CACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTGGCCGACCAGGTAGATaGACTCGTTGTTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGGRPGR*TRCWRR
Trigger: GCGCCGCCAACAACGAGTTCATCTACCTGGTCGGCC...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTGAGCGTCTGCCGGTCCTGCTaGCCAGGGCTGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LGRGDHRGHTSGGGVGLSVCRSC*PGLWPR
Trigger: CCTCGGCCACAGCCCTGGTCAGCAGGACCGGCAGAC...GCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGGGGTCCCGCCTGTGCTaGGGGGCGTCTTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQGSRLC*GASSSS
Trigger: ACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACCC...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGGGGTCCCGCCTGTGCTaGGGGGCGTCTTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPGSRLC*GASSSS
Trigger: ACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACCC...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCATCCTCGTCTGCCTATaGGGCGGCACCAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASILVCL*GGTSPL
Trigger: TAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGAT...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGACAGGGCCAGCGGGATaGTGCAGCGTACAACAGGGA +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPTGPAG*CSVQQG
Trigger: TCCCTGTTGTACGCTGCATCATCCCGCTGGCCCTGT...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GGATCATGTCCAGGAGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGGGGCTGTGGCACCATaGGCCGCCCACCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSCPGGTLAGGPRPRSSCGAVAP*AAHPPG
Trigger: CCCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCC...ACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCTGGACATGATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCCCAGCCCTTCGCCTCTaGCCATGGCCATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPPALRL*PWPWPW
Trigger: CCACGGCCATGGCCATGGGCAGAGGCGAAGGGCTGG...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCTTCGAGGACGCCTaGTGCCCACCTCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPSFEDA*CPPRTR
Trigger: CCTGGTCCGAGGTGGGCAGCAGGCGTCCTCGAAGCT...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCACGCGGATGAGGCCCTaGTGGATGATCCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RAASAIPASVSQSRGRAGTRMRP*WMILCP
Trigger: GGGACAGAGGATCATCCAGCAGGGCCTCATCCGCGT...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGTCTTCTCCAGCTGTTTaGGCAGCGCCAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPSSPAV*AAPAWR
Trigger: CCGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGA...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCTCTTCTCCAGCTGTTTaGGCAGCGCCAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RAASAIPASVSQSRGRAGSSPAV*AAPAWR
Trigger: CCGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGA...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGGTCTCCAGTAGGTTCTaGACCACCTCCTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLVSSRF*TTSSRP
Trigger: CGGCCTGGAGGAGGTGGTGCAGAACCTACTGGAGAC...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGCCTGTGCAGGGGCCGTaGCCTGCTGCAGGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: ALAGAHGSLRMSAGPADQPVQGP*PAAGAA
Trigger: AGCGGCTCCTGCAGCAGGGCACGGCCCCTGCACAGG...CTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGGACGGACTGAACGTGTaGAGGACACCTCGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRDGLNV*RTPRGV
Trigger: GACGCCCCGAGGTGTCCTGCACACGTTCAGTCCGTC...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAAGGTGGCGCTGCCCTTaGCGGCGCTCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLRWRCP*RRSRFS
Trigger: AGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCT...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGAGCATGGCCGGTGCTTaGTCTTGGGGCGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQSMAGA*SWGGHG
Trigger: ACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCT...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGCTGCAGCATGGCCGGTaGTTGCTCTTGGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPLQHGR*LLLGRA
Trigger: TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAG...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGTCTGCTCAGGGCTGCTaGCGACCGGATCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLSAQGC*RPDPLL
Trigger: AAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGA...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GGCCAGGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTCGGCACCTCCTGACCTaGACACACCTGTGCACGCTC +
Preference number: 4 (lower is better)
Translates to: GQVGEEGARLPRGLARTIRHLLT*THLCTL
Trigger: GAGCGTGCACAGGTGTGTGCAGGTCAGGAGGTGCCG...AATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGGCTGCCACTGGGTTaGCTCATTCCCTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASGLPLG*LIPSAL
Trigger: CAGGGCAGAGGGAATGAGGCAACCCAGTGGCAGCCC...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTGGGCTGCCACTGGGTTaGCTCATTCCCTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLGLPLG*LIPSAL
Trigger: CAGGGCAGAGGGAATGAGGCAACCCAGTGGCAGCCC...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCGGGGCCCAGCGGGGCTaGCACTGGGTTGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIGAQRG*HWVASF
Trigger: GAATGAGGCAACCCAGTGGCAGCCCCGCTGGGCCCC...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTACAAGCGGGGGAGGGGTaGTCACGGTGCTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLQAGEG*SRCSQQ
Trigger: CTGTTGGGAGCACCGTGACCACCCCTCCCCCGCTTG...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCGCCTGTCGGCTTGCTaGAGACTCGGCAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGRLSAC*RLGRGD
Trigger: GTCACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCG...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGCGCCTGTCGGCTTGCTaGAGACTCGGCAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQRLSAC*RLGRGD
Trigger: GTCACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCG...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTTGCGCAGCGCCAGCTTaGCGGCCGCCTGTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASCAAPA*RPPVGL
Trigger: CAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCA...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTGAGCTGCGCAGCGCCAGCTTaGCGGCCGCCTGTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LGRGDHRGHTSGGGVGLSCAAPA*RPPVGL
Trigger: CAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCA...GCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGGGTGTGGGGCAGCGGTaGGCTCGGCCTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ALAGAHGSLRMSAGPADQGVGQR*ARPWPV
Trigger: CACAGGCCAAGGCCGAGCCCACCGCTGCCCCACACC...CTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCCTTCAGCACGGGGTGTaGGGCAGCGGTGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTLQHGV*GSGGLG
Trigger: GCCGAGCCCACCGCTGCCCCACACCCCGTGCTGAAG...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCCGGGACAGCTGGCTaGAGGCCTGTAGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRPGTAG*RPVAQP
Trigger: GGGCTGTGCTACAGGCCTCCAGCCAGCTGTCCCGGG...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000609040.5
CDS-3UTR CCA 90 bp GGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACAGGAGGTACTCTCGCTaGCGGTCCACGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: GGGGGSPSSTGPGSHYFHRRYSR*RSTAEE
Trigger: CTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCT...GTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGGGGATGGAGCGGGGTaGGATCATGTCCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPGDGAG*DHVQEV
Trigger: TACCTCCTGGACATGATCCCACCCCGCTCCATCCCC...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGTGGCTGACTGGGGGATaGAGCGGGGTGGGATCATGT +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLWLTGG*SGVGSC
Trigger: ACATGATCCCACCCCGCTCCATCCCCCAGTCAGCCA...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCCGGAGGGTGGTGCAGTaGGTCCTTCTAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASRRVVQ*VLLDQG
Trigger: CCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCG...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACGCCGGTGCTTGCTCTTaGGGCGGGCACGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GGGGGSPSSTGPGSHYFHAGACS*GGHGVF
Trigger: GAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGC...GTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCCCCTGCCAGGGGCTGTaGCACCATGAGCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTPCQGL*HHEPPT
Trigger: GGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGG...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
3UTR CAA 72 bp GAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTaGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: EVLPLQHGRCLL*GRARCLPEPAE
Trigger: CTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACGGGCATGACGACCTGTaGGCTCGCCTGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHGHDDL*ARLWPQ
Trigger: CTGGGGCCACAGGCGAGCTCACAGGTCGTCATGCCC...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCGTCGCGGGCCTCTCCTaGGCGGAACGCCAACTTACG +
Preference number: 4 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPVAGLS*AERQLT
Trigger: CGTAAGTTGGCGTTCCGCTCAGGAGAGGCCCGCGAC...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTGGGCTGACAAACGCAAGCCGCCAGGCTTGGGCTaGCAAACGCAAGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: VHGRGALVHRQAWADKRKPPGLG*QTQGSR
Trigger: GCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGG...CTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCAAGGTCCCCCAGCGATaGTCCTCGTCTGCCTATGAG +
Preference number: 4 (lower is better)
Translates to: RAASAIPASVSQSRGRAGKVPQR*SSSAYE
Trigger: CTCATAGGCAGACGAGGATCATCGCTGGGGGACCTT...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTGGGGCTGTGGCACCATaGGCCGCCCACCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRGAVAP*AAHPPG
Trigger: CCCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCC...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCAGGGGCTGTGGCACCATaGGCCGCCCACCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPGAVAP*AAHPPG
Trigger: CCCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCC...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGCCGTGGCCTCTGTTaGCCTCAGCAATCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASGRGLC*PQQSLG
Trigger: ACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCC...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TTGCGCAGCGCCAGCTTGGCGGCCGCCTGTCGGCTTGCTGGAGACTCGGCAGAGGGCCGTGGCCTCTGTTaGCCTCAGCAATCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LRSASLAAACRLAGDSAEGRGLC*PQQSLG
Trigger: ACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCC...CTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CGCAAGGGTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTAGCTTCGAGGACGCCTaGTGCCCACCTCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: RKGPACAEGRLLPVGGGASFEDA*CPPRTR
Trigger: CCTGGTCCGAGGTGGGCAGCAGGCGTCCTCGAAGCT...AGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACCCTTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp AGGTGGCGCTGCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCGGCCGCCTGTCGGCTTaGTGGAGACTCGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RWRCPCRRSRFSQNVCRSGRLSA*WRLGRG
Trigger: ACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCC...GGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTGTCTCCAGTAGGTTCTaGACCACCTCCTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLVSSRF*TTSSRP
Trigger: CGGCCTGGAGGAGGTGGTGCAGAACCTACTGGAGAC...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGTCTCCAGTAGGTTCTaGACCACCTCCTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASVSSRF*TTSSRP
Trigger: CGGCCTGGAGGAGGTGGTGCAGAACCTACTGGAGAC...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GGACTGAACGTGTGCAGGACACCTCGGGGCGTCGTGGCCGAACCCCGGGACAGCGTCTCCAGTAGGTTCTaGACCACCTCCTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GLNVCRTPRGVVAEPRDSVSSRF*TTSSRP
Trigger: CGGCCTGGAGGAGGTGGTGCAGAACCTACTGGAGAC...GCTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTGTCCTGCACACGTTCAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGTGCTGCAGGAGCCGCTaGTCAATCTCCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPCCRSR*SISCSC
Trigger: GCAGGAACAGGAGATTGAGCAGCGGCTCCTGCAGCA...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTGCAGGGGCCGTGCCCTaGTGCAGGAGCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPAGAVP*CRSRCS
Trigger: TGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCCTGC...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CACAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGCCTGTGCAGGGGCCGTaGCCTGCTGCAGGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: HKGGLQPAGVLHLERLLLPVQGP*PAAGAA
Trigger: AGCGGCTCCTGCAGCAGGGCACGGCCCCTGCACAGG...CAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCCGAGGCTGAGTTCTaGAGTTTGGGTGACGGACTG +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPAEAEF*SLGDGL
Trigger: CAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGC...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAAGGTGGCGCTGCCCTTaGCGGCGCTCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRRWRCP*RRSRFS
Trigger: AGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCT...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CGCAAGGGTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTAGGTGGCGCTGCCCTTaGCGGCGCTCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RKGPACAEGRLLPVGGGARWRCP*RRSRFS
Trigger: AGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCT...AGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACCCTTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTAGTTGGAGGTGGCGCTaGCCTTGCCGGCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASSWRWR*PCRRSR
Trigger: CCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCAACT...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAGCCGAGGAGCTCTTGTaGACCGCCAGGCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRAEELL*TARLGL
Trigger: CAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGC...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGGAGGTGGCGCTGCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGGCCGAGGAGCTCTTGTaGACCGCCAGGCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WRWRCPCRRSRFSQNVCRAEELL*TARLGL
Trigger: CAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGC...CCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAAGCATGGCCGGTGCTTaGTCTTGGGGCGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRSMAGA*SWGGHG
Trigger: ACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCT...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GGTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTCTGCAGCATGGCCGGTaGTTGCTCTTGGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GPACAEGRLLPVGGGAALLQHGR*LLLGRA
Trigger: TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAG...AAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGCGCTGGCCTTGCCCATaGGCATCACAGTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPRWPCP*ASQCPG
Trigger: CCCTGGACACTGTGATGCGCATGGGCAAGGCCAGCG...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGCTTTCTGCTCAGGGCTaGTGCCGACCGGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQLSAQG*CRPDPL
Trigger: GAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAG...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGGAAGCCGGCCCAGCCTaGAAGAGACACGGAACGGCT +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQEAGPA*KRHGTA
Trigger: AGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTC...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGGGGCTGCCACTGGGTTaGCTCATTCCCTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQGLPLG*LIPSAL
Trigger: CAGGGCAGAGGGAATGAGGCAACCCAGTGGCAGCCC...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCTCCGGTCAGGTCTTGTaGCGTCCCGCGGAGGCGACT +
Preference number: 4 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCISGQVL*RPAEAT
Trigger: AGTCGCCTCCGCGGGACGCCACAAGACCTGACCGGA...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360315.7
CDS-3UTR CCA 90 bp TGGAGGTGGCGCTGCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCGGTCAGGTCTTGTaGCGTCCCGCGGAGGCGACT +
Preference number: 4 (lower is better)
Translates to: WRWRCPCRRSRFSQNVCRSGQVL*RPAEAT
Trigger: AGTCGCCTCCGCGGGACGCCACAAGACCTGACCGGA...CCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS-3UTR CCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGCACATCGTCCTCTGTTaGGTCCCGTTCAAGCGCTCG +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLHIVLC*VPFKRS
Trigger: CGAGCGCTTGAACGGGACCCAACAGAGGACGATGTG...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCCAGCAATCCTTGGGTTaGACCTGCTCCCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASQQSLG*TCSRLR
Trigger: CCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTG...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCCTCTGCCCATGGCCATaGCCGTGGCCTCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPLCPWP*PWPLLP
Trigger: GGGCAACAGAGGCCACGGCCATGGCCATGGGCAGAG...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACTCTGCCCATGGCCATaGCCGTGGCCTCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRLCPWP*PWPLLP
Trigger: GGGCAACAGAGGCCACGGCCATGGCCATGGGCAGAG...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTGCTCTGCCCATGGCCATaGCCGTGGCCTCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: VPPVLRGVFFQLEVALPLLCPWP*PWPLLP
Trigger: GGGCAACAGAGGCCACGGCCATGGCCATGGGCAGAG...CAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACTTCGCCTCTGCCCATaGCCATGGCCGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRLRLCP*PWPWPL
Trigger: CAGAGGCCACGGCCATGGCCATGGGCAGAGGCGAAG...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCCCCGGGACAGCACAGTaGCGGCCGACATCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIPGTAQ*RPTSCL
Trigger: AAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCGGG...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358713.7
ENST00000360315.7
CDS-3UTR CCA 90 bp AGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTGAGCGGAGGTGGTGTGGGGCAGCGGTaGGCTCGGCCTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RGDHRGHTSGGGVGLSGGGVGQR*ARPWPV
Trigger: CACAGGCCAAGGCCGAGCCCACCGCTGCCCCACACC...ACCTCCGCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGTCACCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTGAGCCCCGGGACAGCTGGCTaGAGGCCTGTAGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: LGRGDHRGHTSGGGVGLSPGTAG*RPVAQP
Trigger: GGGCTGTGCTACAGGCCTCCAGCCAGCTGTCCCGGG...GCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS-3UTR CCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGGAACCCCGGGACAGCTaGCTGGAGGCCTGTAGCACA +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQEPRDS*LEACST
Trigger: TGTGCTACAGGCCTCCAGCCAGCTGTCCCGGGGTTC...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000609040.5
CDS-3UTR CCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTCACCTCGGGGCGTCGTaGCCGAACCCCGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPHLGAS*PNPGTA
Trigger: AGCTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTG...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTGTGCACCGCCAGGCTTaGGCTGACAAACGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGVHRQA*ADKRKG
Trigger: ACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCAC...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTGGGGATGGAGCGGGGTaGGATCATGTCCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLGDGAG*DHVQEV
Trigger: TACCTCCTGGACATGATCCCACCCCGCTCCATCCCC...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGTGGCTGACTGGGGGATaGAGCGGGGTGGGATCATGT +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRWLTGG*SGVGSC
Trigger: ACATGATCCCACCCCGCTCCATCCCCCAGTCAGCCA...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGATTCCACGTGGCTGACTaGGGGATGGAGCGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRFHVAD*GMERGG
Trigger: CCCACCCCGCTCCATCCCCCAGTCAGCCACGTGGAA...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTACGGAGGGTGGTGCAGTaGGTCCTTCTAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLRRVVQ*VLLDQG
Trigger: CCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCG...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCCTTGCCTCTGCAGCATaGCCGGTGCTTGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASLASAA*PVLALG
Trigger: CCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAG...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GGCCAGGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTCTTGCCTCTGCAGCATaGCCGGTGCTTGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GQVGEEGARLPRGLARTILASAA*PVLALG
Trigger: CCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAG...AATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGGCTCGCCGCACACCTaGACGGCACCTCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASGSPHT*TAPPDL
Trigger: CAGGTCAGGAGGTGCCGTCCAGGTGTGCGGCGAGCC...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTGGGACGCCCTCGCACTaGCATGAAGCCGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPGTPSH*HEAGPA
Trigger: GGCTGGGCCGGCTTCATGCCAGTGCGAGGGCGTCCC...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTACCAGCAGGAATGTTCTaGGTGCCCCGAACAAGCGGG +
Preference number: 4 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLPAGMF*VPRTSG
Trigger: CCCGCTTGTTCGGGGCACTCAGAACATTCCTGCTGG...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGATGATCCTCTGTCCCTaGATCTGCACACTGGGCACC +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLMILCP*ICTLGT
Trigger: GGTGCCCAGTGTGCAGATTCAGGGACAGAGGATCAT...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGGGGTGGAGTTGGCCTaGGCGGAGGTGGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASGVELA*AEVAVV
Trigger: GACAACAGCCACCTCCGCTCAGGCCAACTCCACCCC...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGTGCAGTTCTCACACATaGTGGCGCCGCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPCSSHT*WRRSSP
Trigger: AGGAGAAGAGCGGCGCCATCATGTGTGAGAACTGCA...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCTGGTGTGCTCCACCTTaGGCGCCTTCTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASWCAPP*APSSGW
Trigger: CCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCA...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGTGGTGTGCTCCACCTTaGGCGCCTTCTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRWCAPP*APSSGW
Trigger: CCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCA...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp GCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGGTCGCGGGCCTCTCCTaGGCGGAACGCCAACTTACG +
Preference number: 4 (lower is better)
Translates to: ALAGAHGSLRMSAGPADQVAGLS*AERQLT
Trigger: CGTAAGTTGGCGTTCCGCTCAGGAGAGGCCCGCGAC...CTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS-3UTR TCA 90 bp CGGACTGAACGTGTGCAGGACACCTCGGGGCGTCGTGGCCGAACCCCGGGACAGGTTTGGGTGACGGACTaGACGTGTGCAGGACACCTC +
Preference number: 4 (lower is better)
Translates to: RTERVQDTSGRRGRTPGQVWVTD*TCAGHL
Trigger: GAGGTGTCCTGCACACGTTCAGTCCGTCACCCAAAC...CTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTGTCCTGCACACGTTCAGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCCCGCCAGGCTTGGGCTaGCAAACGCAAGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASPPGLG*QTQGSR
Trigger: GCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGG...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCTCACAGTGTCCAGGGTaGGCCGCCCGTGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASSQCPG*AARVPA
Trigger: TGCCGGCACACGGGCGGCTCACCCTGGACACTGTGA...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GCCTGTCGGCTTGCTGGAGACTCGGCAGAGGTGACCACAGAGGCCACACTAGTGTCACAGTGTCCAGGGTaGGCCGCCCGTGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: ACRLAGDSAEVTTEATLVSQCPG*AARVPA
Trigger: TGCCGGCACACGGGCGGCTCACCCTGGACACTGTGA...CACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCGACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGACAGGGCCAGCGGGATaGTGCAGCGTACAACAGGGA +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQTGPAG*CSVQQG
Trigger: TCCCTGTTGTACGCTGCATCATCCCGCTGGCCCTGT...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTCACAAGGATGGGTTaGCAGCCATCAGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLLTRMG*QPSALE
Trigger: CTCCAGGGCTGATGGCTGTCAACCCATCCTTGTGAG...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CGGCTTGCTGGAGACTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGCCGGGCATCCGAGCTaGAGAGGTCTTCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: RLAGDSAEVTTEATLVGVAGHPS*RGLLGG
Trigger: ACCGCCCAGAAGACCTCTTCAGCTCGGATGCCCGGC...CACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGTCCTTGGGTTGGACCTaGTCCCGGCTCAGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPSLGWT*SRLRCH
Trigger: GTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGA...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAGGGGTGGTCACGGTaGTCCCAACAGAACCTGTGG +
Preference number: 4 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLEGWSR*SQQNLW
Trigger: CCACAGGTTCTGTTGGGAGCACCGTGACCACCCCTC...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTTTCGAGGACGCCTGCTaGCCACCTCGGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPFEDAC*PPRTRG
Trigger: GCCCCTGGTCCGAGGTGGGCAGCAGGCGTCCTCGAA...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGACGCGGATGAGGCCCTaGTGGATGATCCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQTRMRP*WMILCP
Trigger: GGGACAGAGGATCATCCAGCAGGGCCTCATCCGCGT...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTGTCCGTCTTGCACTGTaGACACATGTAGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLVRLAL*THVGLP
Trigger: CGGGAGCCCTACATGTGTGCACAGTGCAAGACGGAC...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGTTCAGCCGGCTGGTGTaGTCCACCTTGAGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQFSRLV*STLSAF
Trigger: GAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAA...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTTGCTGCAGGAGCCGCTaGTCAATCTCCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLCCRSR*SISCSC
Trigger: GCAGGAACAGGAGATTGAGCAGCGGCTCCTGCAGCA...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCGGGGCCGTGCCCTGCTaGAGGAGCCGCTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASGAVPC*RSRCSI
Trigger: GATTGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCC...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTGGGGCCGTGCCCTGCTaGAGGAGCCGCTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPGAVPC*RSRCSI
Trigger: GATTGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCC...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCGCAGGGGCCGTGCCCTaGTGCAGGAGCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPAGAVP*CRSRCS
Trigger: TGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCCTGC...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCAGTTGGAGGTGGCGCTaGCCTTGCCGGCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASSWRWR*PCRRSR
Trigger: CCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCAACT...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TTGACGAGCAGGCTGGTGTTGGGAACATTGGCGACGCGGATGAGGCCCTGCTGGAGTTGGAGGTGGCGCTaGCCTTGCCGGCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: LTSRLVLGTLATRMRPCWSWRWR*PCRRSR
Trigger: CCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCAACT...CCAGCAGGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGTCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGCCGAGGAGCTCTTGTaGACCGCCAGGCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDAEELL*TARLGL
Trigger: CAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGC...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGCATGGCCGGTGCTTaGTCTTGGGGCGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTSMAGA*SWGGHG
Trigger: ACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCT...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATAGCATGGCCGGTGCTTaGTCTTGGGGCGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDSMAGA*SWGGHG
Trigger: ACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCT...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CTTCCACGGGGCCTGGCTCGCACTATTTCCACGTGGCTGACTGGGGGATGGAGCCTGCAGCATGGCCGGTaGTTGCTCTTGGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LPRGLARTISTWLTGGWSLQHGR*LLLGRA
Trigger: TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAG...GCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCCGCTGGCCTTGCCCATaGGCATCACAGTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIRWPCP*ASQCPG
Trigger: CCCTGGACACTGTGATGCGCATGGGCAAGGCCAGCG...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GCCGAGGCTGAGTTCTGCAGTTTGGGTGACGGACTGAACGTGTGCAGGACACCTCGGGCCGGCCGTCCCTaGCAGGGGCTGTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: AEAEFCSLGDGLNVCRTPRAGRP*QGLWHH
Trigger: ATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCCG...AGGTGTCCTGCACACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTTGCCTCGGCCATCCCTaGATCTGTCAGTCAGTCACG +
Preference number: 4 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGCLGHP*ICQSVT
Trigger: CGTGACTGACTGACAGATGCAGGGATGGCCGAGGCA...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CGCCTTCACAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCCCCCTCCAGCTTTCTaGTCAGGGCTGCTGCCGACC +
Preference number: 4 (lower is better)
Translates to: RLHKGGLQPAGVLHLERLPPPAF*SGLLPT
Trigger: GGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG...AAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTGAAGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGACACGGAACGGCTTCTaGCTTTCCTCACGGAACCAG +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLTRNGF*LSSRNQ
Trigger: CTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGT...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTGGGAGGCGGAGGCTaGAGTGAGCCAAGATCATAC +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLLGGGG*SEPRSY
Trigger: GTATGATCTTGGCTCACTGCAGCCTCCGCCTCCCAG...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS-3UTR GCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGCTTCGGGGTATGGGGTaGTGGTCCTACCAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPLRGMG*WSYQLA
Trigger: GGCCAACTGGTAGGACCAGCACCCCATACCCCGAAG...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS-3UTR CCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGCACATCGTCCTCTGTTaGGTCCCGTTCAAGCGCTCG +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQHIVLC*VPFKRS
Trigger: CGAGCGCTTGAACGGGACCCAACAGAGGACGATGTG...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CGCCTTCACAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCGCCTCTGCCCATaGCCATGGCCGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RLHKGGLQPAGVLHLERLLRLCP*PWPWPL
Trigger: CAGAGGCCACGGCCATGGCCATGGGCAGAGGCGAAG...AAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTGAAGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCCCTTCAAGGCCACCGTaGTCAGCCCATTCACTCTCG +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASPSRPP*SAHSLS
Trigger: CGAGAGTGAATGGGCTGACCACGGTGGCCTTGAAGG...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGCGAGCTGAAGAGGTCTaGAGTGATGGCTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPRAEEV*SDGLPA
Trigger: TGCTGGCAAGCCATCACTCCAGACCTCTTCAGCTCG...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGTGCTGGGGTGGGCTGTaGGATGTTGACGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPCWGGL*DVDEQA
Trigger: AGCCTGCTCGTCAACATCCCACAGCCCACCCCAGCA...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGCGTTGTTGGCGGCGCTaGGCAGGAAGTTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQRCWRR*AGSSSL
Trigger: CAGAGATGAACTTCCTGCCCAGCGCCGCCAACAACG...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTGGTGTGGGGCAGCGGTaGGCTCGGCCTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRGVGQR*ARPWPV
Trigger: CACAGGCCAAGGCCGAGCCCACCGCTGCCCCACACC...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCTTCAGCACGGGGTGTaGGGCAGCGGTGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRLQHGV*GSGGLG
Trigger: GCCGAGCCCACCGCTGCCCCACACCCCGTGCTGAAG...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGGAGGTACTCTCGCTaGCGGTCCACGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTRRYSR*RSTAEE
Trigger: CTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCT...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACTTCCACGTGGCTGACTaGGGGATGGAGCGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHFHVAD*GMERGG
Trigger: CCCACCCCGCTCCATCCCCCAGTCAGCCACGTGGAA...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp TGTAGGGCTCCCGGGACAGCACAGTGGCGGCCGACATCCTGCCTGCTTGTGTCTTTCCACGTGGCTGACTaGGGGATGGAGCGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CRAPGTAQWRPTSCLLVSFHVAD*GMERGG
Trigger: CCCACCCCGCTCCATCCCCCAGTCAGCCACGTGGAA...AGACACAAGCAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCGGGAGCCCTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCCGCACTATTTCCACGTaGCTGACTGGGGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASRTIST*LTGGWS
Trigger: GCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCG...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp TGGAGGTGGCGCTGCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGCGGAGGGTGGTGCAGTaGGTCCTTCTAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: WRWRCPCRRSRFSQNVCRRRVVQ*VLLDQG
Trigger: CCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCG...CCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCGCCGGTGCTTGCTCTTaGGGCGGGCACGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTAGACS*GGHGVF
Trigger: GAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGC...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCTTGCCTCTGCAGCATaGCCGGTGCTTGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQLASAA*PVLALG
Trigger: CCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAG...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATATGGAGGCGTTCAGCTaGAGCGAGGGCTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDMEAFS*SEGCLG
Trigger: GCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCAT...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCACATACGTATGTACGTaGGCACGGGACGCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASTYVCT*ARDALA
Trigger: TGCGAGGGCGTCCCGTGCCCACGTACATACGTATGT...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCAGCTGGAGCTGGGGCTaGGGGCCGGCAGGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLSWSWG*GPAGAA
Trigger: AGCCGCACCTGCCGGCCCCCAGCCCCAGCTCCAGCT...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGACCTCGTCAGAGGGGTaGTTCCTGGTCACCGTAGAG +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRTSSEG*FLVTVE
Trigger: CTCTACGGTGACCAGGAACCACCCCTCTGACGAGGT...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGAACTCACCAGAGCCCTaGCAACAATCTCCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPNSPEP*QQSPCH
Trigger: GTGGCACGGAGATTGTTGCCAGGGCTCTGGTGAGTT...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358713.7
CDS-3UTR CCA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCCTTCTTCGGTCATTCTaGCTTCGGGGTATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: RAASAIPASVSQSRGRAGLLRSF*LRGMGC
Trigger: GCACCCCATACCCCGAAGCCAGAATGACCGAAGAAG...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404158.5
3UTR CAA 72 bp GGGGTGGGCTGTGGGATGTTGACGAGCAGGCTGGTGTaGGGAACATTGGCGACGCGGATGAGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GVGCGMLTSRLV*GTLATRMRPCW
Trigger: CCAGCAGGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGTCAACATCCCACAGCCCACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCT +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLSSARF*LRVRHA
Trigger: AGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGA...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCT +
Preference number: 4 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGSSARF*LRVRHA
Trigger: AGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGA...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCATGATCCTCTGTCCCTaGATCTGCACACTGGGCACC +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASMILCP*ICTLGT
Trigger: GGTGCCCAGTGTGCAGATTCAGGGACAGAGGATCAT...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GCTTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCGGCCGACCAGGTAGATaGACTCGTTGTTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: ACRNLILVGLSGPGPRQCGRPGR*TRCWRR
Trigger: GCGCCGCCAACAACGAGTTCATCTACCTGGTCGGCC...GCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCCCCGCCAGCGGCACGTaGAGTCCGTCTTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASPASGT*SPSCTV
Trigger: CACAGTGCAAGACGGACTTCACGTGCCGCTGGCGGG...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCGTCTGCCGGTCCTGCTaGCCAGGGCTGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLVCRSC*PGLWPR
Trigger: CCTCGGCCACAGCCCTGGTCAGCAGGACCGGCAGAC...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTGAGCATCCTCGTCTGCCTATaGGGCGGCACCAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: LGRGDHRGHTSGGGVGLSILVCL*GGTSPL
Trigger: TAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGAT...GCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGGTAGAGTTCCTGGGATaGGGTCAGGACGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQVEFLG*GQDGHS
Trigger: GCTATGGCCGTCCTGACCTCATCCCAGGAACTCTAC...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTTCTTCGGTCATTCTaGACTCACCAGAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLLLRSF*THQSPG
Trigger: GCCAGGGCTCTGGTGAGTTCAGAATGACCGAAGAAG...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358713.7
CDS-3UTR GCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACCAGCCCTTCGCCTCTaGCCATGGCCATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRAPALRL*PWPWPW
Trigger: CCACGGCCATGGCCATGGGCAGAGGCGAAGGGCTGG...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCATTCGAGGACGCCTGCTaGCCACCTCGGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPFEDAC*PPRTRG
Trigger: GCCCCTGGTCCGAGGTGGGCAGCAGGCGTCCTCGAA...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCAGCTTCGAGGACGCCTaGTGCCCACCTCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASSFEDA*CPPRTR
Trigger: CCTGGTCCGAGGTGGGCAGCAGGCGTCCTCGAAGCT...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGGGCCGCCTGTCGGCTTaGTGGAGACTCGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: KAAFSRLVCSTLSAFFWLGRLSA*WRLGRG
Trigger: ACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCC...CAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGTGCTGCAGGAGCCGCTaGTCAATCTCCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQCCRSR*SISCSC
Trigger: GCAGGAACAGGAGATTGAGCAGCGGCTCCTGCAGCA...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTGGGGCCGTGCCCTGCTaGAGGAGCCGCTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRGAVPC*RSRCSI
Trigger: GATTGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCC...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCAGCATGGCCGGTGCTTaGTCTTGGGGCGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASSMAGA*SWGGHG
Trigger: ACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCT...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCCGCTGGCCTTGCCCATaGGCATCACAGTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTRWPCP*ASQCPG
Trigger: CCCTGGACACTGTGATGCGCATGGGCAAGGCCAGCG...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTCGCTGGCCTTGCCCATaGGCATCACAGTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASRWPCP*ASQCPG
Trigger: CCCTGGACACTGTGATGCGCATGGGCAAGGCCAGCG...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGCCCGGGCGCTGGCCTTaGCCATGCGCATCACAGTGT +
Preference number: 4 (lower is better)
Translates to: KAAFSRLVCSTLSAFFWLPGRWP*PCASQC
Trigger: ACACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGG...CAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGCGGGCCGGCCGTCCCTaGCAGGGGCTGTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: AHLPGARPGWLKIASIEMRAGRP*QGLWHH
Trigger: ATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCCG...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTAGCTGGAGCGAGGGCTaGCTCGGCCATCCCTGCATC +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPSWSEG*LGHPCI
Trigger: GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCT...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCTCTGCTCAGGGCTGCTaGCGACCGGATCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCISAQGC*RPDPLL
Trigger: AAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGA...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTTCTGCTCAGGGCTGCTaGCGACCGGATCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RYSRWRSTAEELLCTARLSAQGC*RPDPLL
Trigger: AAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGA...AAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACTTTCTGCTCAGGGCTaGTGCCGACCGGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRLSAQG*CRPDPL
Trigger: GAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAG...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GAAATCCTGACATCTGTGCGCAGCGGCTCGCCGCACACCTGGACGGCACCTCCTCGGCACCTCCTGACCTaGACACACCTGTGCACGCTC +
Preference number: 4 (lower is better)
Translates to: EILTSVRSGSPHTWTAPPRHLLT*THLCTL
Trigger: GAGCGTGCACAGGTGTGTGCAGGTCAGGAGGTGCCG...AGGAGGTGCCGTCCAGGTGTGCGGCGAGCCGCTGCGCACAGATGTCAGGATTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATCGGCACCTCCTGACCTaGACACACCTGTGCACGCTC +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDRHLLT*THLCTL
Trigger: GAGCGTGCACAGGTGTGTGCAGGTCAGGAGGTGCCG...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TGTAGGGCTCCCGGGACAGCACAGTGGCGGCCGACATCCTGCCTGCTTGTGTCTGTGGGCTGTGTGAGGTaGGCATGTCCACGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: CRAPGTAQWRPTSCLLVSVGCVR*ACPRAH
Trigger: ATGGGCCCGTGGACATGCGCACCTCACACAGCCCAC...AGACACAAGCAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCGGGAGCCCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS-3UTR CCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCGAGCTGAAGAGGTCTaGAGTGATGGCTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGRAEEV*SDGLPA
Trigger: TGCTGGCAAGCCATCACTCCAGACCTCTTCAGCTCG...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCCGAGCAGGCTGGTGTTaGGAACATTGGCGACGCGGA +
Preference number: 4 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPRAGWC*EHWRRG
Trigger: TCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCG...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCTGGCCTGAGCGGAGGTaGCTGTTGTCCCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIWPERR*LLSPSV
Trigger: CACTGAAGGGGACAACAGCCACCTCCGCTCAGGCCA...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTGTGGCCTGAGCGGAGGTaGCTGTTGTCCCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: VPPVLRGVFFQLEVALPLWPERR*LLSPSV
Trigger: CACTGAAGGGGACAACAGCCACCTCCGCTCAGGCCA...CAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCCGCCTGTCGGCTTGCTaGAGACTCGGCAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTRLSAC*RLGRGD
Trigger: GTCACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCG...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTCCCGGGACAGCACAGTaGCGGCCGACATCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPPGTAQ*RPTSCL
Trigger: AAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCGGG...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358713.7
ENST00000360315.7
CDS-3UTR CCA 90 bp AGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGGTTGTCATGCAGCTTCAGCACGGGGTGTaGGGCAGCGGTGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: SRLVCSTLSAFFWLVVMQLQHGV*GSGGLG
Trigger: GCCGAGCCCACCGCTGCCCCACACCCCGTGCTGAAG...CTGCATGACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACGAACCCCGGGACAGCTaGCTGGAGGCCTGTAGCACA +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHEPRDS*LEACST
Trigger: TGTGCTACAGGCCTCCAGCCAGCTGTCCCGGGGTTC...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGGAACCCCGGGACAGCTaGCTGGAGGCCTGTAGCACA +
Preference number: 4 (lower is better)
Translates to: ALAGAHGSLRMSAGPADQEPRDS*LEACST
Trigger: TGTGCTACAGGCCTCCAGCCAGCTGTCCCGGGGTTC...CTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS-3UTR CCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCCACCTCGGGGCGTCGTaGCCGAACCCCGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLHLGAS*PNPGTA
Trigger: AGCTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTG...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCGGGGATGGAGCGGGGTaGGATCATGTCCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIGDGAG*DHVQEV
Trigger: TACCTCCTGGACATGATCCCACCCCGCTCCATCCCC...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GGTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTGGGGATGGAGCGGGGTaGGATCATGTCCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: GPACAEGRLLPVGGGAALGDGAG*DHVQEV
Trigger: TACCTCCTGGACATGATCCCACCCCGCTCCATCCCC...AAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTGTGGCTGACTGGGGGATaGAGCGGGGTGGGATCATGT +
Preference number: 4 (lower is better)
Translates to: VPPVLRGVFFQLEVALPLWLTGG*SGVGSC
Trigger: ACATGATCCCACCCCGCTCCATCCCCCAGTCAGCCA...CAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GGGCCTGGCTCGCACTATTTCCACGTGGCTGACTGGGGGATGGAGCGGGGTGGGCGCACTATTTCCACGTaGCTGACTGGGGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: GPGSHYFHVADWGMERGGRTIST*LTGGWS
Trigger: GCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCG...CCCACCCCGCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCGAGCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCGGCTCGCCGCACACCTaGACGGCACCTCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPGSPHT*TAPPDL
Trigger: CAGGTCAGGAGGTGCCGTCCAGGTGTGCGGCGAGCC...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGGCTGGAGCTCAATTaGAACCAGTGGAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASGLELN*NQWSPE
Trigger: TTCTGGGCTCCACTGGTTCCAATTGAGCTCCAGCCC...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATTGCTCCCTGGGGACATaGGGCCGACCCTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDCSLGT*GRPSPF
Trigger: AAAGGGAGAGGGTCGGCCCCATGTCCCCAGGGAGCA...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGACCCAGGCAGTGCCTaGTTTAAGAGGGTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPDPGSA*FKRVCF
Trigger: AAAGCACACCCTCTTAAACCAGGCACTGCCTGGGTC...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGGACCCAGGCAGTGCCTaGTTTAAGAGGGTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLDPGSA*FKRVCF
Trigger: AAAGCACACCCTCTTAAACCAGGCACTGCCTGGGTC...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGTTCCAAGGGCACTTaGCCATTCCAAACCCTACCC +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASGSKGT*PFQTLP
Trigger: GGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACC...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CAA 72 bp AGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTaGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: RGVFFQLEVALP*PALTVLSECLP
Trigger: CGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCT +
Preference number: 4 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPSSARF*LRVRHA
Trigger: AGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGA...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTCCAGGGGCGGGGGTATaGCACTGCCGGGCATCCGAG +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGPGAGV*HCRASE
Trigger: CTCGGATGCCCGGCAGTGTCATACCCCCGCCCCTGG...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAATGATCCTCTGTCCCTaGATCTGCACACTGGGCACC +
Preference number: 4 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLMILCP*ICTLGT
Trigger: GGTGCCCAGTGTGCAGATTCAGGGACAGAGGATCAT...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACTGGGCTGTGGGATGTTaGCGAGCAGGCTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHWAVGC*RAGWCW
Trigger: CCAACACCAGCCTGCTCGTCAACATCCCACAGCCCA...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGGGCTGTTGTTGTCCCCTTCAGTaGTGCTGGGGTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGAHGSLRMSAGPADQGCCCPLQ*CWGGLW
Trigger: CCACAGCCCACCCCAGCATCACTGAAGGGGACAACA...ACAGCCCTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCGGGGTGGAGTTGGCCTaGGCGGAGGTGGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPGVELA*AEVAVV
Trigger: GACAACAGCCACCTCCGCTCAGGCCAACTCCACCCC...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp TCGGCTTGCTGGAGACTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGCCGACCAGGTAGATaGACTCGTTGTTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SACWRLGRGDHRGHTSGGGRPGR*TRCWRR
Trigger: GCGCCGCCAACAACGAGTTCATCTACCTGGTCGGCC...ACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCCGCCAGCGGCACGTaGAGTCCGTCTTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRPASGT*SPSCTV
Trigger: CACAGTGCAAGACGGACTTCACGTGCCGCTGGCGGG...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACGTGTGCAGTTCTCACACATaGTGGCGCCGCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GGGGSPSSTGPGSHYFHVCSSHT*WRRSSP
Trigger: AGGAGAAGAGCGGCGCCATCATGTGTGAGAACTGCA...CACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCGTTTGGGTGACGGACTaGACGTGTGCAGGACACCTC +
Preference number: 4 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPVWVTD*TCAGHL
Trigger: GAGGTGTCCTGCACACGTTCAGTCCGTCACCCAAAC...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGTTCTGCAGTTTGGGTaGCGGACTGAACGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLVLQFG*RTERVQ
Trigger: CTGCACACGTTCAGTCCGTCACCCAAACTGCAGAAC...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTGTCTGCCGGTCCTGCTaGCCAGGGCTGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGVCRSC*PGLWPR
Trigger: CCTCGGCCACAGCCCTGGTCAGCAGGACCGGCAGAC...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCAGGGTCCCGCCTGTGCTaGGGGGCGTCTTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPGSRLC*GASSSS
Trigger: ACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACCC...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGAGCCTGGGGGTTAAATaGGCCTTTATTAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRSLGVK*AFIRML
Trigger: CAACATTCTAATAAAGGCTCATTTAACCCCCAGGCT...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCTGTCTACAGAGCAGCTaGCAGAGGGAACCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASCLQSS*QREPFP
Trigger: TGGAAACGGTTCCCTCTGTCAGCTGCTCTGTAGACA...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGCGAGGTGTGAACTCTaGGATCTCCCCAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDARCEL*DLPSPV
Trigger: GACAGGGCTGGGGAGATCTCAGAGTTCACACCTCGC...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTTCCTTGGGTTGGACCTaGTCCCGGCTCAGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASSLGWT*SRLRCH
Trigger: GTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGA...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GCTTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCTCCTTGGGTTGGACCTaGTCCCGGCTCAGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: ACRNLILVGLSGPGPRQCSLGWT*SRLRCH
Trigger: GTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGA...GCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGGGCTGTGGCCGTGGCCTCTGTTaGCCTCAGCAATCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: AGAHGSLRMSAGPADQGCGRGLC*PQQSLG
Trigger: ACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCC...ACAGCCCTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGATGTCACTGTGTGAGGTaGGCATGTCCACGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRCHCVR*ACPRAH
Trigger: ATGGGCCCGTGGACATGCGCACCTCACACAGTGACA...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GAAATCCTGACATCTGTGCGCAGCGGCTCGCCGCACACCTGGACGGCACCTCCTGAGGGGTGGTCACGGTaGTCCCAACAGAACCTGTGG +
Preference number: 4 (lower is better)
Translates to: EILTSVRSGSPHTWTAPPEGWSR*SQQNLW
Trigger: CCACAGGTTCTGTTGGGAGCACCGTGACCACCCCTC...AGGAGGTGCCGTCCAGGTGTGCGGCGAGCCGCTGCGCACAGATGTCAGGATTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATTCTTCTCCAGCTGTTTaGGCAGCGCCAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDSSPAV*AAPAWR
Trigger: CCGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGA...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTGGTCCGTCTTGCACTGTaGACACATGTAGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: VPPVLRGVFFQLEVALPLVRLAL*THVGLP
Trigger: CGGGAGCCCTACATGTGTGCACAGTGCAAGACGGAC...CAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTGTGCTGCAGGAGCCGCTaGTCAATCTCCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VPPVLRGVFFQLEVALPLCCRSR*SISCSC
Trigger: GCAGGAACAGGAGATTGAGCAGCGGCTCCTGCAGCA...CAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTGCAGGGGCCGTGCCCTaGTGCAGGAGCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGAGAVP*CRSRCS
Trigger: TGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCCTGC...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCCTGCAGCATGGCCGGTaGTTGCTCTTGGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPLQHGR*LLLGRA
Trigger: TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAG...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGATTGAGGTCTTGCCTCTaGAGCATGGCCGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRLRSCL*SMAGAC
Trigger: GCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAA...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGATGCCTCGGCCATCCCTaGATCTGTCAGTCAGTCACG +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRCLGHP*ICQSVT
Trigger: CGTGACTGACTGACAGATGCAGGGATGGCCGAGGCA...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAAGCTGGAGCGAGGGCTaGCTCGGCCATCCCTGCATC +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDESWSEG*LGHPCI
Trigger: GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCT...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCCTTTCTGCTCAGGGCTaGTGCCGACCGGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTLSAQG*CRPDPL
Trigger: GAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAG...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCCCCTCCAGCTTTCTaGTCAGGGCTGCTGCCGACC +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTEPPPAF*SGLLPT
Trigger: GGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CACCGCCAGGCTTGGGCTGACAAACGCAAGGGTCCCGCCTGTGCTGAGGGGCGTACACGGAACGGCTTCTaGCTTTCCTCACGGAACCAG +
Preference number: 4 (lower is better)
Translates to: HRQAWADKRKGPACAEGRTRNGF*LSSRNQ
Trigger: CTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGT...ACGCCCCTCAGCACAGGCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGCACATTCTGACGGCTTaGAGGAACCTGATCCTGGTA +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLHILTA*RNLILV
Trigger: TACCAGGATCAGGTTCCTGCAAGCCGTCAGAATGTG...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGCTTTTCTGTGTGAGGTaGGCATGTCCACGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPLFCVR*ACPRAH
Trigger: ATGGGCCCGTGGACATGCGCACCTCACACAGAAAAG...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATCAGCAATCCTTGGGTTaGACCTGCTCCCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDQQSLG*TCSRLR
Trigger: CCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTG...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGCAGCAATCCTTGGGTTaGACCTGCTCCCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ALAGAHGSLRMSAGPADQQQSLG*TCSRLR
Trigger: CCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTG...CTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACTTCGCCTCTGCCCATaGCCATGGCCGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTELRLCP*PWPWPL
Trigger: CAGAGGCCACGGCCATGGCCATGGGCAGAGGCGAAG...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAACTTCGCCTCTGCCCATaGCCATGGCCGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDELRLCP*PWPWPL
Trigger: CAGAGGCCACGGCCATGGCCATGGGCAGAGGCGAAG...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTTGGCCTGAGCGGAGGTaGCTGTTGTCCCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASWPERR*LLSPSV
Trigger: CACTGAAGGGGACAACAGCCACCTCCGCTCAGGCCA...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGGGTGTGGGGCAGCGGTaGGCTCGGCCTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AHLPGARPGWLKIASIEMGVGQR*ARPWPV
Trigger: CACAGGCCAAGGCCGAGCCCACCGCTGCCCCACACC...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACGTGCACCGCCAGGCTTaGGCTGACAAACGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHVHRQA*ADKRKG
Trigger: ACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCAC...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGGGCTGTGTGCACCGCCAGGCTTaGGCTGACAAACGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: AGAHGSLRMSAGPADQGCVHRQA*ADKRKG
Trigger: ACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCAC...ACAGCCCTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTGAGCGGGGATGGAGCGGGGTaGGATCATGTCCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LGRGDHRGHTSGGGVGLSGDGAG*DHVQEV
Trigger: TACCTCCTGGACATGATCCCACCCCGCTCCATCCCC...GCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCTTGCCTCTGCAGCATaGCCGGTGCTTGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHLASAA*PVLALG
Trigger: CCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAG...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCAATGGAGGCGTTCAGCTaGAGCGAGGGCTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPMEAFS*SEGCLG
Trigger: GCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCAT...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTACAGAACAAGCAGCAATaGAGGCGTTCAGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLQNKQQ*RRSAGA
Trigger: CGCTCCAGCTGAACGCCTCCATTGCTGCTTGTTCTG...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGGGAAGAAGCCAGCCTaGGTGCTCCTTCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDGKKPA*VLLLGG
Trigger: TCCTCCCAGAAGGAGCACCCAGGCTGGCTTCTTCCC...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGATGAACTCACAAGGATaGGTTGACAGCCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLMNSQG*VDSHQP
Trigger: GGGCTGATGGCTGTCAACCCATCCTTGTGAGTTCAT...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAACCTCGTCAGAGGGGTaGTTCCTGGTCACCGTAGAG +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRTSSEG*FLVTVE
Trigger: CTCTACGGTGACCAGGAACCACCCCTCTGACGAGGT...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCTGGGCTGTGGGATGTTaGCGAGCAGGCTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASWAVGC*RAGWCW
Trigger: CCAACACCAGCCTGCTCGTCAACATCCCACAGCCCA...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAAGGCCGACCAGGTAGATaGACTCGTTGTTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTEGRPGR*TRCWRR
Trigger: GCGCCGCCAACAACGAGTTCATCTACCTGGTCGGCC...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGGTTGTCGGCCGACCAGGTAGATaGACTCGTTGTTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: AFSRLVCSTLSAFFWLVVGRPGR*TRCWRR
Trigger: GCGCCGCCAACAACGAGTTCATCTACCTGGTCGGCC...GACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp GCCGAGGCTGAGTTCTGCAGTTTGGGTGACGGACTGAACGTGTGCAGGACACCTCCCGCCAGCGGCACGTaGAGTCCGTCTTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: AEAEFCSLGDGLNVCRTPPASGT*SPSCTV
Trigger: CACAGTGCAAGACGGACTTCACGTGCCGCTGGCGGG...AGGTGTCCTGCACACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAGTTCTGCAGTTTGGGTaGCGGACTGAACGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRVLQFG*RTERVQ
Trigger: CTGCACACGTTCAGTCCGTCACCCAAACTGCAGAAC...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAAATCCTCGTCTGCCTATaGGGCGGCACCAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTEILVCL*GGTSPL
Trigger: TAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGAT...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACAAGGTCCCCCAGCGATaGTCCTCGTCTGCCTATGAG +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHKVPQR*SSSAYE
Trigger: CTCATAGGCAGACGAGGATCATCGCTGGGGGACCTT...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTCCCAAACGGAAATCCTaGCATCTGTGCGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASPKRKS*HLCAAA
Trigger: AGCCGCTGCGCACAGATGTCAGGATTTCCGTTTGGG...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTTGTAGCAGTTGTGTTTaGAGGCGGTGGCCCTACAAA +
Preference number: 4 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGCSSCV*RRWPYK
Trigger: TTTGTAGGGCCACCGCCTTCAAACACAACTGCTACA...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGTATGTACGTTGTCCCTaGTGGAATGCTCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPYVRCP*WNAPWG
Trigger: TCCCCAGGGAGCATTCCATCAGGGACAACGTACATA...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTGCGAGGTGTGAACTCTaGGATCTCCCCAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPARCEL*DLPSPV
Trigger: GACAGGGCTGGGGAGATCTCAGAGTTCACACCTCGC...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CGCCTTCACAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTTGTTGTCCCCTTCAGTaGTGCTGGGGTGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RLHKGGLQPAGVLHLERLCCPLQ*CWGGLC
Trigger: ACACAGCCCACCCCAGCATCACTGAAGGGGACAACA...AAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTGAAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS-3UTR GCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACTCGGGCTCGAGGGCTaGTCGTTGTCGGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRALGLEG*SLSEST
Trigger: TGTGCTCTCCGACAACGAGCAGCCCTCGAGCCCGAG...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GCTTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCAGGAATGTTCTGAGTaGCCCGAACAAGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ACRNLILVGLSGPGPRQCQECSE*PEQAGE
Trigger: CTCCCCCGCTTGTTCGGGGCACTCAGAACATTCCTG...GCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CGGGACAGCACAGTGGCGGCCGACATCCTGCCTGCTTGTGTCTCCAGTAGGTTCTCTTCTCCAGCTGTTTaGGCAGCGCCAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RDSTVAADILPACVSSRFSSPAV*AAPAWR
Trigger: CCGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGA...GAACCTACTGGAGACACAAGCAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TCGGCTTGCTGGAGACTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTTTCAGCCGGCTGGTGTaGTCCACCTTGAGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SACWRLGRGDHRGHTSGGFSRLV*STLSAF
Trigger: GAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAA...ACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CGCCTTCACAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTGCCGAGGCTGAGTTCTaGAGTTTGGGTGACGGACTG +
Preference number: 4 (lower is better)
Translates to: RLHKGGLQPAGVLHLERLAEAEF*SLGDGL
Trigger: CAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGC...AAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTGAAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCTTGAGGTCTTGCCTCTaGAGCATGGCCGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTLRSCL*SMAGAC
Trigger: GCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAA...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CTTCCACGGGGCCTGGCTCGCACTATTTCCACGTGGCTGACTGGGGGATGGAGCTTGAGGTCTTGCCTCTaGAGCATGGCCGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LPRGLARTISTWLTGGWSLRSCL*SMAGAC
Trigger: GCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAA...GCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTGAGCTTGAGGTCTTGCCTCTaGAGCATGGCCGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LGRGDHRGHTSGGGVGLSLRSCL*SMAGAC
Trigger: GCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAA...GCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCGGCACCTCCTGACCTaGACACACCTGTGCACGCTC +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRRHLLT*THLCTL
Trigger: GAGCGTGCACAGGTGTGTGCAGGTCAGGAGGTGCCG...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTGAAGCCGGCCCAGCCTaGAAGAGACACGGAACGGCT +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLREAGPA*KRHGTA
Trigger: AGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTC...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCGAAGCCGGCCCAGCCTaGAAGAGACACGGAACGGCT +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPEAGPA*KRHGTA
Trigger: AGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTC...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGTTGCCTCATTCCCTCTaGCCTGAAGCTTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPLPHSL*PEAFAS
Trigger: TGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCAA...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGGCCTCCCCAATACCCTaGACTAGTGTAACCGTCTAT +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRASPIP*TSVTVY
Trigger: ATAGACGGTTACACTAGTGCAGGGTATTGGGGAGGC...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTGCCTCCCCAATACCCTaGACTAGTGTAACCGTCTAT +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLASPIP*TSVTVY
Trigger: ATAGACGGTTACACTAGTGCAGGGTATTGGGGAGGC...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAAGATCATACCACTaGACTCCAGCCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRPRSYH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAGTGGTATGATCTTGG...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS-3UTR GCA 90 bp GCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGTGGCGGCCGACATCCTaGCTGCTTGTGTCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ALAGAHGSLRMSAGPADQWRPTS*LLVSPV
Trigger: TACTGGAGACACAAGCAGGCAGGATGTCGGCCGCCA...CTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGGGCTGTTGGCGGCCGACATCCTaGCTGCTTGTGTCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: AGAHGSLRMSAGPADQGCWRPTS*LLVSPV
Trigger: TACTGGAGACACAAGCAGGCAGGATGTCGGCCGCCA...ACAGCCCTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TTGCGCAGCGCCAGCTTGGCGGCCGCCTGTCGGCTTGCTGGAGACTCGGCAGAGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCGAAG +
Preference number: 4 (lower is better)
Translates to: LRSASLAAACRLAGDSAETPCSA*FFGHSK
Trigger: CTTCGAATGACCGAAGAAGCATGCCGAACACGGAGT...CTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS-3UTR CCA 90 bp CACAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGCGAGCAGGCTGGTGTTaGGAACATTGGCGACGCGGA +
Preference number: 4 (lower is better)
Translates to: HKGGLQPAGVLHLERLLLRAGWC*EHWRRG
Trigger: TCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCG...CAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTTGCTGGGGTGGGCTGTaGGATGTTGACGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPCWGGL*DVDEQA
Trigger: AGCCTGCTCGTCAACATCCCACAGCCCACCCCAGCA...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GTTGTCATGCAGTTCTCACACATGATGGCGCCGCTCTTCTCCTCCCGCCAGCGGCGCCTGTCGGCTTGCTaGAGACTCGGCAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VVMQFSHMMAPLFSSRQRRLSAC*RLGRGD
Trigger: GTCACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCG...CCGCTGGCGGGAGGAGAAGAGCGGCGCCATCATGTGTGAGAACTGCATGACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTGCGCAGCGCCAGCTTaGCGGCCGCCTGTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLCAAPA*RPPVGL
Trigger: CAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCA...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTCGTTGTTGGCGGCGCTaGGCAGGAAGTTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASRCWRR*AGSSSL
Trigger: CAGAGATGAACTTCCTGCCCAGCGCCGCCAACAACG...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGCGCCTTCTTCTGGTTaGTTGTCATGCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQAPSSG*LSCSSH
Trigger: GTGAGAACTGCATGACAACCAACCAGAAGAAGGCGC...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGTTGAGCGCCTTCTTCTaGTTGGTTGTCATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPLSAFF*LVVMQF
Trigger: GAACTGCATGACAACCAACCAGAAGAAGGCGCTCAA...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCCACCTCGGGGCGTCGTaGCCGAACCCCGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLHLGAS*PNPGTA
Trigger: AGCTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTG...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATCGCACTATTTCCACGTaGCTGACTGGGGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDRTIST*LTGGWS
Trigger: GCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCG...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGGGCTGTGTCTTCCACGGGGCCTaGCTCGCACTATTTCCACGT +
Preference number: 4 (lower is better)
Translates to: AGAHGSLRMSAGPADQGCVFHGA*LALFPR
Trigger: ACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGAC...ACAGCCCTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTGGGAGCAAGGCCAGGGTaGCTTAAGATTGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: VPPVLRGVFFQLEVALPLGARPG*LKIASI
Trigger: GATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCC...CAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CCA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGGGAGCCCAGAACTCATaGAGACATACGTATGTACGT +
Preference number: 4 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLGAQNS*RHTYVR
Trigger: ACGTACATACGTATGTCTCCATGAGTTCTGGGCTCC...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGACAGTTACAATCAGTTaGGCTGGGGGCTCCCACATT +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRTVTIS*AGGSHI
Trigger: AATGTGGGAGCCCCCAGCCCAACTGATTGTAACTGT...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACACCTCGTCAGAGGGGTaGTTCCTGGTCACCGTAGAG +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHTSSEG*FLVTVE
Trigger: CTCTACGGTGACCAGGAACCACCCCTCTGACGAGGT...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTTCTGGCTTCGGGGTATaGGGTGCTGGTCCTACCAGT +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASSGFGV*GAGPTS
Trigger: ACTGGTAGGACCAGCACCCCATACCCCGAAGCCAGA...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS-3UTR CCA 90 bp GGGCCTGGCTCGCACTATTTCCACGTGGCTGACTGGGGGATGGAGCGGGGTGGGGCTGAAGAGGTCTTCTaGGCGGTGGCTTCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: GPGSHYFHVADWGMERGGAEEVF*AVASFC
Trigger: ACAAAAGGAAGCCACCGCCCAGAAGACCTCTTCAGC...CCCACCCCGCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCGAGCCAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000418032.3
3UTR CAA 72 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTaGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: RIEVLPLQHGRC*LLGRARCLPEP
Trigger: TGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR CAA 72 bp CTGACCAGGGCTGTGGCCGAGGCTGAGTTCTGCAGTTaGGGTGACGGACTGAACGTGTGCAGGACACCTCGG +
Preference number: 4 (lower is better)
Translates to: LTRAVAEAEFCS*GDGLNVCRTPR
Trigger: CCGAGGTGTCCTGCACACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGCCACAGCCCTGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCCTTCATGTCACTGTGTaGGGTGCGCATGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASLHVTV*GAHVHG
Trigger: CCCGTGGACATGCGCACCTCACACAGTGACATGAAG...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CACAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGTGGTGTGCTCCACCTTaGGCGCCTTCTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: HKGGLQPAGVLHLERLLLWCAPP*APSSGW
Trigger: CCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCA...CAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACACCGCCAGGCTTGGGCTaGCAAACGCAAGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTPPGLG*QTQGSR
Trigger: GCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGG...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTACAGGGCCAGCGGGATaGTGCAGCGTACAACAGGGA +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRTGPAG*CSVQQG
Trigger: TCCCTGTTGTACGCTGCATCATCCCGCTGGCCCTGT...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CGGGACAGCACAGTGGCGGCCGACATCCTGCCTGCTTGTGTCTCCAGTAGGTTCCCCAAACGGAAATCCTaGCATCTGTGCGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: RDSTVAADILPACVSSRFPKRKS*HLCAAA
Trigger: AGCCGCTGCGCACAGATGTCAGGATTTCCGTTTGGG...GAACCTACTGGAGACACAAGCAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp GCGGCCGCCTGTCGGCTTGCTGGAGACTCGGCAGAGGTGACCACAGAGGCCACATGTAGCAGTTGTGTTTaGAGGCGGTGGCCCTACAAA +
Preference number: 4 (lower is better)
Translates to: AAACRLAGDSAEVTTEATCSSCV*RRWPYK
Trigger: TTTGTAGGGCCACCGCCTTCAAACACAACTGCTACA...TGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCCCCTGGATCTTGGAATaGAAGCCACCCTTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPPWILE*KPPFPN
Trigger: ATTGGGGAAGGGTGGCTTTCATTCCAAGATCCAGGG...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAGGGCAGCAGTCCATATaGACTCACAAGGATGGGTTG +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRGQQSI*THKDGL
Trigger: CAACCCATCCTTGTGAGTTCATATGGACTGCTGCCC...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCGGGCAGCAGTCCATATaGACTCACAAGGATGGGTTG +
Preference number: 4 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPGQQSI*THKDGL
Trigger: CAACCCATCCTTGTGAGTTCATATGGACTGCTGCCC...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTACAACAGGCGAGGTGTaGACTCTGAGATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASTTGEV*TLRSPQ
Trigger: CTGGGGAGATCTCAGAGTTCACACCTCGCCTGTTGT...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCACAACAGGCGAGGTGTaGACTCTGAGATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTTTGEV*TLRSPQ
Trigger: CTGGGGAGATCTCAGAGTTCACACCTCGCCTGTTGT...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCGTAGAGTTCCTGGGATaGGGTCAGGACGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASVEFLG*GQDGHS
Trigger: GCTATGGCCGTCCTGACCTCATCCCAGGAACTCTAC...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTTGGGCTGTTCCACTCTaGGAAGGGCCGCTACAGACC +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRWAVPL*EGPLQT
Trigger: GGTCTGTAGCGGCCCTTCTCAGAGTGGAACAGCCCA...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTGAGCGGAGGTGACTGCTTTTCTGTGTaGGGTGCGCATGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: RGDHRGHTSGGGVGLSGGDCFSV*GAHVHG
Trigger: CCCGTGGACATGCGCACCTCACACAGAAAAGCAGTC...ACCTCCGCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGTCACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTTCCTTGGGTTGGACCTaGTCCCGGCTCAGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRSLGWT*SRLRCH
Trigger: GTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGA...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCCAGGAATGTTCTGAGTaGCCCGAACAAGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASQECSE*PEQAGE
Trigger: CTCCCCCGCTTGTTCGGGGCACTCAGAACATTCCTG...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTATCTGGAGTGATGGCTTaGCAGCAGGAATGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLSGVMA*QQECSE
Trigger: CTCAGAACATTCCTGCTGGCAAGCCATCACTCCAGA...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGCCTGTGCTGGAATGTTaGCTAATGCTGTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRPVLEC*LMLWIC
Trigger: GCAAATCCACAGCATTAGGCAACATTCCAGCACAGG...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAAACGCGGATGAGGCCCTaGTGGATGATCCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTETRMRP*WMILCP
Trigger: GGGACAGAGGATCATCCAGCAGGGCCTCATCCGCGT...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTGGCCGCCTGTCGGCTTaGTGGAGACTCGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGGRLSA*WRLGRG
Trigger: ACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCC...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTTCTTCTCCAGCTGTTTaGGCAGCGCCAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRSSPAV*AAPAWR
Trigger: CCGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGA...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGTCAATCTCCTGTTCCTaGTGCAGCGCCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQSISCS*CSAFTK
Trigger: CTTTGTGAAGGCGCTGCAGCAGGAACAGGAGATTGA...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACGTGTCAATCTCCTGTTCCTaGTGCAGCGCCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: GGGGSPSSTGPGSHYFHVSISCS*CSAFTK
Trigger: CTTTGTGAAGGCGCTGCAGCAGGAACAGGAGATTGA...CACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCGACGGACTGAACGTGTaGAGGACACCTCGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLDGLNV*RTPRGV
Trigger: GACGCCCCGAGGTGTCCTGCACACGTTCAGTCCGTC...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TGGAGGTGGCGCTGCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGAGCTTCTGGAATCCCTaGTTCTCTGGCTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: WRWRCPCRRSRFSQNVCRSFWNP*FSGWVC
Trigger: ACAGACCCAGCCAGAGAAGCAGGGATTCCAGAAGCT...CCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAACTTTCTGCTCAGGGCTaGTGCCGACCGGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDELSAQG*CRPDPL
Trigger: GAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAG...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCTGGTTTAAGAGGGTGTaGTTTGCTGTGGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: RAASAIPASVSQSRGRAGWFKRV*FAVGRT
Trigger: TGTTCTACCCACAGCAAAGCACACCCTCTTAAACCA...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACAGCAATCCTTGGGTTaGACCTGCTCCCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRAQQSLG*TCSRLR
Trigger: CCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTG...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCCCTTCAAGGCCACCGTaGTCAGCCCATTCACTCTCG +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASPSRPP*SAHSLS
Trigger: CGAGAGTGAATGGGCTGACCACGGTGGCCTTGAAGG...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACGAACCTGTGGGCTTCTaGGCGGTGGCTTCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHEPVGF*AVASFC
Trigger: ACAAAAGGAAGCCACCGCCCAGAAGCCCACAGGTTC...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCACGAGCAGGCTGGTGTTaGGAACATTGGCGACGCGGA +
Preference number: 4 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPRAGWC*EHWRRG
Trigger: TCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCG...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGGTTGTCTGGCCTGAGCGGAGGTaGCTGTTGTCCCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: AFSRLVCSTLSAFFWLVVWPERR*LLSPSV
Trigger: CACTGAAGGGGACAACAGCCACCTCCGCTCAGGCCA...GACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGGCGCCTTCTTCTGGTTaGTTGTCATGCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQAPSSG*LSCSSH
Trigger: GTGAGAACTGCATGACAACCAACCAGAAGAAGGCGC...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCGAACCCCGGGACAGCTaGCTGGAGGCCTGTAGCACA +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLEPRDS*LEACST
Trigger: TGTGCTACAGGCCTCCAGCCAGCTGTCCCGGGGTTC...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAGTGCACCGCCAGGCTTaGGCTGACAAACGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEVHRQA*ADKRKG
Trigger: ACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCAC...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTAGGAGGTACTCTCGCTaGCGGTCCACGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGRRYSR*RSTAEE
Trigger: CTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCT...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCCGGAGGGTGGTGCAGTaGGTCCTTCTAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLRRVVQ*VLLDQG
Trigger: CCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCG...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CACCGCCAGGCTTGGGCTGACAAACGCAAGGGTCCCGCCTGTGCTGAGGGGCGTGAATCCCTGCTTCTCTaGCTGGGTCTGTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: HRQAWADKRKGPACAEGRESLLL*LGLFFS
Trigger: ACTGAAGAACAGACCCAGCCAGAGAAGCAGGGATTC...ACGCCCCTCAGCACAGGCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGCCCAGAACTCATaGAGACATACGTATGTACGT +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASGAQNS*RHTYVR
Trigger: ACGTACATACGTATGTCTCCATGAGTTCTGGGCTCC...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTCTGAGGTTGGTTCGCTaGGGAGGGCTTTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPLRLVR*GGLSVG
Trigger: TCCCACTGAAAGCCCTCCCCAGCGAACCAACCTCAG...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCCTGAGGTTGGTTCGCTaGGGAGGGCTTTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASLRLVR*GGLSVG
Trigger: TCCCACTGAAAGCCCTCCCCAGCGAACCAACCTCAG...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCTACAATCAGTTGGGCTaGGGGCTCCCACATTCTGAC +
Preference number: 4 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIYNQLG*GLPHSD
Trigger: GTCAGAATGTGGGAGCCCCCAGCCCAACTGATTGTA...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTGTTTCCAGGTGCTGTTaGAGGTTCATGTCACAGGTA +
Preference number: 4 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGVSRCC*RFMSQV
Trigger: TACCTGTGACATGAACCTCCAACAGCACCTGGAAAC...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAACGGGGTATGGGGTGCTaGTCCTACCAGTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDERGMGC*SYQLAM
Trigger: CATGGCCAACTGGTAGGACCAGCACCCCATACCCCG...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404158.5
3UTR CAA 72 bp AATCAGTTGGGCTGGGGGCTCCCACATTCTGACGGCTaGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACC +
Preference number: 4 (lower is better)
Translates to: NQLGWGLPHSDG*QEPDPGRALGT
Trigger: GGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGCCGTCAGAATGTGGGAGCCCCCAGCCCAACTGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCTTCATGTCACTGTGTaGGGTGCGCATGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRLHVTV*GAHVHG
Trigger: CCCGTGGACATGCGCACCTCACACAGTGACATGAAG...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCTGGGCTGTGGGATGTTaGCGAGCAGGCTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLWAVGC*RAGWCW
Trigger: CCAACACCAGCCTGCTCGTCAACATCCCACAGCCCA...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp TTGACGAGCAGGCTGGTGTTGGGAACATTGGCGACGCGGATGAGGCCCTGCTGGGTTCTGCAGTTTGGGTaGCGGACTGAACGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LTSRLVLGTLATRMRPCWVLQFG*RTERVQ
Trigger: CTGCACACGTTCAGTCCGTCACCCAAACTGCAGAAC...CCAGCAGGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCCCGCCAGGCTTGGGCTaGCAAACGCAAGGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCPPGLG*QTQGSR
Trigger: GCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGG...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGGGGGCTGTGGCACCATaGGCCGCCCACCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKGAVAP*AAHPPG
Trigger: CCCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCC...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCACCCAAACGGAAATCCTaGCATCTGTGCGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPPKRKS*HLCAAA
Trigger: AGCCGCTGCGCACAGATGTCAGGATTTCCGTTTGGG...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCAAGTTTCCTACAGACTaGGGATATTCACACGACAGG +
Preference number: 4 (lower is better)
Translates to: AAWPVLALGAGTVSSRASKFPTD*GYSHDR
Trigger: CCTGTCGTGTGAATATCCTCAGTCTGTAGGAAACTT...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATCCCTGGATCTTGGAATaGAAGCCACCCTTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDPWILE*KPPFPN
Trigger: ATTGGGGAAGGGTGGCTTTCATTCCAAGATCCAGGG...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACTCACAAGGATGGGTTaGCAGCCATCAGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTELTRMG*QPSALE
Trigger: CTCCAGGGCTGATGGCTGTCAACCCATCCTTGTGAG...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCTGTCTACAGAGCAGCTaGCAGAGGGAACCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTCLQSS*QREPFP
Trigger: TGGAAACGGTTCCCTCTGTCAGCTGCTCTGTAGACA...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTCTCGGGCTCGAGGGCTaGTCGTTGTCGGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGLGLEG*SLSEST
Trigger: TGTGCTCTCCGACAACGAGCAGCCCTCGAGCCCGAG...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCGGCCGCCTGTCGGCTTaGTGGAGACTCGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLGRLSA*WRLGRG
Trigger: ACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCC...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCATGCTGCAGGAGCCGCTaGTCAATCTCCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPCCRSR*SISCSC
Trigger: GCAGGAACAGGAGATTGAGCAGCGGCTCCTGCAGCA...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCGCCGAGGCTGAGTTCTaGAGTTTGGGTGACGGACTG +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPAEAEF*SLGDGL
Trigger: CAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGC...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTGAGCCAAGAATTGAGGTCTTaGCTCTGCAGCATGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LGRGDHRGHTSGGGVGLSQELRS*LCSMAG
Trigger: ACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTG...GCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CGGCTTGCTGGAGACTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTGCAAGAATTGAGGTCTTaGCTCTGCAGCATGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RLAGDSAEVTTEATLVGVQELRS*LCSMAG
Trigger: ACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTG...CACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTGCCCTGATGAAACTTTaGAGCCAAGAATTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLALMKL*SQELRS
Trigger: AGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGC...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCGGGCCGGCCGTCCCTaGCAGGGGCTGTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKRAGRP*QGLWHH
Trigger: ATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCCG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAATGCCTCGGCCATCCCTaGATCTGTCAGTCAGTCACG +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTECLGHP*ICQSVT
Trigger: CGTGACTGACTGACAGATGCAGGGATGGCCGAGGCA...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACACCCCCTCCAGCTTTCTaGTCAGGGCTGCTGCCGACC +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTPPPAF*SGLLPT
Trigger: GGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCACACGGAACGGCTTCTaGCTTTCCTCACGGAACCAG +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASTRNGF*LSSRNQ
Trigger: CTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGT...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCATTAAAGTCCCTAACTaGATGGGTAGGAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: RAASAIPASVSQSRGRAGIKVPN*MGRKTR
Trigger: CCTGGTTTTCCTACCCATGCAGTTAGGGACTTTAAT...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGTGGTTTAAGAGGGTGTaGTTTGCTGTGGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRWFKRV*FAVGRT
Trigger: TGTTCTACCCACAGCAAAGCACACCCTCTTAAACCA...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGGC +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTTPCSA*FFGHSG
Trigger: GCCAGAATGACCGAAGAAGCATGCCGAACACGGAGT...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS-3UTR CCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCCAAGCGGGGGAGGGGTaGTCACGGTGCTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLQAGEG*SRCSQQ
Trigger: CTGTTGGGAGCACCGTGACCACCCCTCCCCCGCTTG...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCTGCTGGGGTGGGCTGTaGGATGTTGACGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLCWGGL*DVDEQA
Trigger: AGCCTGCTCGTCAACATCCCACAGCCCACCCCAGCA...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGTTGTTGGCGGCGCTaGGCAGGAAGTTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRARCWRR*AGSSSL
Trigger: CAGAGATGAACTTCCTGCCCAGCGCCGCCAACAACG...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCCCCGGGACAGCTGGCTaGAGGCCTGTAGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCPGTAG*RPVAQP
Trigger: GGGCTGTGCTACAGGCCTCCAGCCAGCTGTCCCGGG...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000609040.5
CDS-3UTR CCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCGTGCACCGCCAGGCTTaGGCTGACAAACGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLVHRQA*ADKRKG
Trigger: ACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCAC...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGGTTGTCATGCAGTGGCTGACTGGGGGATaGAGCGGGGTGGGATCATGT +
Preference number: 4 (lower is better)
Translates to: SRLVCSTLSAFFWLVVMQWLTGG*SGVGSC
Trigger: ACATGATCCCACCCCGCTCCATCCCCCAGTCAGCCA...CTGCATGACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCGCACTATTTCCACGTaGCTGACTGGGGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRRTIST*LTGGWS
Trigger: GCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCG...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCAGTCTTCCACGGGGCCTaGCTCGCACTATTTCCACGT +
Preference number: 4 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPVFHGA*LALFPR
Trigger: ACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGAC...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTCGGAGGGTGGTGCAGTaGGTCCTTCTAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGRRVVQ*VLLDQG
Trigger: CCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCG...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCGCCGGTGCTTGCTCTTaGGGCGGGCACGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLAGACS*GGHGVF
Trigger: GAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGC...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGAAGGCAGTCAAAGACTaGGAGCCTAAGACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQKAVKD*EPKTGK
Trigger: TTTCCCTGTCTTAGGCTCCCAGTCTTTGACTGCCTT...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCCAGAACAAGCAGCAATaGAGGCGTTCAGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASQNKQQ*RRSAGA
Trigger: CGCTCCAGCTGAACGCCTCCATTGCTGCTTGTTCTG...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCGAATCCCTGCTTCTCTaGCTGGGTCTGTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPESLLL*LGLFFS
Trigger: ACTGAAGAACAGACCCAGCCAGAGAAGCAGGGATTC...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGATTAATGGGCAGCTTCTaGAATCCCTGCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRLMGSF*NPCFSG
Trigger: GCCAGAGAAGCAGGGATTCCAGAAGCTGCCCATTAA...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCCACACGACAGGAGCCTaGGGGTTAAATGAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPHTTGA*GLNEPL
Trigger: TAAAGGCTCATTTAACCCCCAGGCTCCTGTCGTGTG...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCTTCTGGGAGGAGCTaGAAGATCTGGCCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRPSGRS*KIWPLS
Trigger: TGACAGGGGCCAGATCTTCCAGCTCCTCCCAGAAGG...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCTGAGGTTGGTTCGCTaGGGAGGGCTTTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRLRLVR*GGLSVG
Trigger: TCCCACTGAAAGCCCTCCCCAGCGAACCAACCTCAG...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAGAGGTGACTTCGGTCTaGATGCCTGATCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEEVTSV*MPDPQP
Trigger: TGGCTGGGGATCAGGCATCCAGACCGAAGTCACCTC...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAATGAACTCACAAGGATaGGTTGACAGCCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRMNSQG*VDSHQP
Trigger: GGGCTGATGGCTGTCAACCCATCCTTGTGAGTTCAT...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CACCGCCAGGCTTGGGCTGACAAACGCAAGGGTCCCGCCTGTGCTGAGGGGCGTAGGTCTTCTGGGCGGTaGCTTCCTTTTGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: HRQAWADKRKGPACAEGRRSSGR*LPFVFD
Trigger: GTCAAATACAAAAGGAAGCCACCGCCCAGAAGACCT...ACGCCCCTCAGCACAGGCGGGACCCTTGCGTTTGTCAGCCCAAGCCTGGCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGGCTTCCTTTTGTATTTaGCTCTGCCGCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRASFCI*LCRNFF
Trigger: GAAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGC...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTTGCAGTTCTCACACATaGTGGCGCCGCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRCSSHT*WRRSSP
Trigger: AGGAGAAGAGCGGCGCCATCATGTGTGAGAACTGCA...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCTGCAGTTCTCACACATaGTGGCGCCGCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPCSSHT*WRRSSP
Trigger: AGGAGAAGAGCGGCGCCATCATGTGTGAGAACTGCA...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCTGGTGTGCTCCACCTTaGGCGCCTTCTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLWCAPP*APSSGW
Trigger: CCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCA...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGGTTGTCATGCAGGTTTGGGTGACGGACTaGACGTGTGCAGGACACCTC +
Preference number: 4 (lower is better)
Translates to: SRLVCSTLSAFFWLVVMQVWVTD*TCAGHL
Trigger: GAGGTGTCCTGCACACGTTCAGTCCGTCACCCAAAC...CTGCATGACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp TTGACGAGCAGGCTGGTGTTGGGAACATTGGCGACGCGGATGAGGCCCTGCTGGCCCTGGATCTTGGAATaGAAGCCACCCTTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: LTSRLVLGTLATRMRPCWPWILE*KPPFPN
Trigger: ATTGGGGAAGGGTGGCTTTCATTCCAAGATCCAGGG...CCAGCAGGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCCTCACAAGGATGGGTTaGCAGCCATCAGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLLTRMG*QPSALE
Trigger: CTCCAGGGCTGATGGCTGTCAACCCATCCTTGTGAG...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTGGGCAGCAGTCCATATaGACTCACAAGGATGGGTTG +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPGQQSI*THKDGL
Trigger: CAACCCATCCTTGTGAGTTCATATGGACTGCTGCCC...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCAGGCGGAGGCTGCAGTaGGCCAAGATCATACCACTG +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLRRRLQ*AKIIPL
Trigger: CAGTGGTATGATCTTGGCTCACTGCAGCCTCCGCCT...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS-3UTR TCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCCTTGAGACAATGTGCTaGCCAACCTTCGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPLETMC*PTFEAG
Trigger: CCCAGCCTCGAAGGTTGGTCAGCACATTGTCTCAAG...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS-3UTR GCA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPTPCSA*FFGHSE
Trigger: TTCAGAATGACCGAAGAAGCATGCCGAACACGGAGT...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000418032.3
CDS-3UTR GCA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGCCATTTTTATTTTCTTaGTCTCCACATCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPPFLFS*SPHRPL
Trigger: CAGAGGACGATGTGGAGAGCAAGAAAATAAAAATGG...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTGGCCGTGGCCTCTGTTaGCCTCAGCAATCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGGRGLC*PQQSLG
Trigger: ACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCC...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACACTCGGGCTCGAGGGCTaGTCGTTGTCGGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTLGLEG*SLSEST
Trigger: TGTGCTCTCCGACAACGAGCAGCCCTCGAGCCCGAG...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCCAGGAATGTTCTGAGTaGCCCGAACAAGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLQECSE*PEQAGE
Trigger: CTCCCCCGCTTGTTCGGGGCACTCAGAACATTCCTG...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGGCAGGGGCCGTGCCCTaGTGCAGGAGCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKAGAVP*CRSRCS
Trigger: TGAGCAGCGGCTCCTGCAGCAGGGCACGGCCCCTGC...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCGACGGACTGAACGTGTaGAGGACACCTCGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLDGLNV*RTPRGV
Trigger: GACGCCCCGAGGTGTCCTGCACACGTTCAGTCCGTC...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GCCGAGGCTGAGTTCTGCAGTTTGGGTGACGGACTGAACGTGTGCAGGACACCTGCCGAGGCTGAGTTCTaGAGTTTGGGTGACGGACTG +
Preference number: 4 (lower is better)
Translates to: AEAEFCSLGDGLNVCRTPAEAEF*SLGDGL
Trigger: CAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGC...AGGTGTCCTGCACACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACAGAAGCCGGCCCAGCCTaGAAGAGACACGGAACGGCT +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTEAGPA*KRHGTA
Trigger: AGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTC...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTCTGATCCCCAGCCACTaGATAGAACTGAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASLIPSH*IELRLV
Trigger: AACCAACCTCAGTTCTATGCAGTGGCTGGGGATCAG...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCACATTCTGACGGCTTaGAGGAACCTGATCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHHILTA*RNLILV
Trigger: TACCAGGATCAGGTTCCTGCAAGCCGTCAGAATGTG...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACGCCTCCCCAATACCCTaGACTAGTGTAACCGTCTAT +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHASPIP*TSVTVY
Trigger: ATAGACGGTTACACTAGTGCAGGGTATTGGGGAGGC...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGTGCTGGGGTGGGCTGTaGGATGTTGACGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: AHLPGARPGWLKIASIEMCWGGL*DVDEQA
Trigger: AGCCTGCTCGTCAACATCCCACAGCCCACCCCAGCA...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGTGCGCAGCGCCAGCTTaGCGGCCGCCTGTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKCAAPA*RPPVGL
Trigger: CAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCA...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACGCGCCTTCTTCTGGTTaGTTGTCATGCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHAPSSG*LSCSSH
Trigger: GTGAGAACTGCATGACAACCAACCAGAAGAAGGCGC...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTCCACGTGGCTGACTaGGGGATGGAGCGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCFHVAD*GMERGG
Trigger: CCCACCCCGCTCCATCCCCCAGTCAGCCACGTGGAA...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCGTCTTCCACGGGGCCTaGCTCGCACTATTTCCACGT +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLVFHGA*LALFPR
Trigger: ACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGAC...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAACAGAACAAGCAGCAATaGAGGCGTTCAGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEQNKQQ*RRSAGA
Trigger: CGCTCCAGCTGAACGCCTCCATTGCTGCTTGTTCTG...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCTTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCTTAATGGGCAGCTTCTaGAATCCCTGCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ACRNLILVGLSGPGPRQCLMGSF*NPCFSG
Trigger: GCCAGAGAAGCAGGGATTCCAGAAGCTGCCCATTAA...GCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAAGGAGCAAGGCCAGGGTaGCTTAAGATTGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTEGARPG*LKIASI
Trigger: GATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCC...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGGGCTGTCACACGACAGGAGCCTaGGGGTTAAATGAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: AGAHGSLRMSAGPADQGCHTTGA*GLNEPL
Trigger: TAAAGGCTCATTTAACCCCCAGGCTCCTGTCGTGTG...ACAGCCCTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CCA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATACAGTTACAATCAGTTaGGCTGGGGGCTCCCACATT +
Preference number: 4 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDTVTIS*AGGSHI
Trigger: AATGTGGGAGCCCCCAGCCCAACTGATTGTAACTGT...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCGGTTCCAAGGGCACTTaGCCATTCCAAACCCTACCC +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPGSKGT*PFQTLP
Trigger: GGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACC...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACTTCACCGAGGTCCGTaGAGTACAGGTAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTELHRGP*STGKTR
Trigger: CCTGGTCTTACCTGTACTCCACGGACCTCGGTGAAG...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCTTCACCGAGGTCCGTaGAGTACAGGTAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRLHRGP*STGKTR
Trigger: CCTGGTCTTACCTGTACTCCACGGACCTCGGTGAAG...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCATGATCCTCTGTCCCTaGATCTGCACACTGGGCACC +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLMILCP*ICTLGT
Trigger: GGTGCCCAGTGTGCAGATTCAGGGACAGAGGATCAT...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGGTTTGGGTGACGGACTaGACGTGTGCAGGACACCTC +
Preference number: 4 (lower is better)
Translates to: AHLPGARPGWLKIASIEMVWVTD*TCAGHL
Trigger: GAGGTGTCCTGCACACGTTCAGTCCGTCACCCAAAC...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCTGTAGCAGTTGTGTTTaGAGGCGGTGGCCCTACAAA +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASCSSCV*RRWPYK
Trigger: TTTGTAGGGCCACCGCCTTCAAACACAACTGCTACA...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCTGGGGGTTAAATaGGCCTTTATTAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPSLGVK*AFIRML
Trigger: CAACATTCTAATAAAGGCTCATTTAACCCCCAGGCT...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCTATGTACGTTGTCCCTaGTGGAATGCTCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPYVRCP*WNAPWG
Trigger: TCCCCAGGGAGCATTCCATCAGGGACAACGTACATA...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GCAGCAATGGAGGCGTTCAGCTGGAGCGAGGGCTGCCTCGGCCATCCCTGCATCCATCAAAAGGCTACTTaGGACAATGTGCTGACCAAC +
Preference number: 4 (lower is better)
Translates to: AAMEAFSWSEGCLGHPCIHQKAT*DNVLTN
Trigger: GTTGGTCAGCACATTGTCTCAAGTAGCCTTTTGATG...GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCATTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS-3UTR GCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTCCTTGGGTTGGACCTaGTCCCGGCTCAGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLSLGWT*SRLRCH
Trigger: GTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGA...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGTGTCACTGTGTGAGGTaGGCATGTCCACGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: AHLPGARPGWLKIASIEMCHCVR*ACPRAH
Trigger: ATGGGCCCGTGGACATGCGCACCTCACACAGTGACA...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTAATTCTTCCTTCAGCTaGTTGATCATCCTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLNSSFS*LIILSR
Trigger: ACGAGAAAGGATGATCAAGCAGCTGAAGGAAGAATT...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACAACGCGGATGAGGCCCTaGTGGATGATCCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTTRMRP*WMILCP
Trigger: GGGACAGAGGATCATCCAGCAGGGCCTCATCCGCGT...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACATTCAGCCGGCTGGTGTaGTCCACCTTGAGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTFSRLV*STLSAF
Trigger: GAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAA...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTCAGCCGGCTGGTGTaGTCCACCTTGAGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLFSRLV*STLSAF
Trigger: GAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAA...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACAAGAATTGAGGTCTTaGCTCTGCAGCATGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRAQELRS*LCSMAG
Trigger: ACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTG...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGATTAAAGTCCCTAACTaGATGGGTAGGAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPIKVPN*MGRKTR
Trigger: CCTGGTTTTCCTACCCATGCAGTTAGGGACTTTAAT...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTCTGATCCCCAGCCACTaGATAGAACTGAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPLIPSH*IELRLV
Trigger: AACCAACCTCAGTTCTATGCAGTGGCTGGGGATCAG...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCGGAACCGTTTCCAGGTaGTGTTGGAGGTTCATGTCA +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASGTVSR*CWRFMS
Trigger: TGACATGAACCTCCAACAGCACCTGGAAACGGTTCC...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACTTGCCTCATTCCCTCTaGCCTGAAGCTTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHLPHSL*PEAFAS
Trigger: TGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCAA...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTTGGCAACAATCTCCGTaGCACTCAGGAGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPWQQSP*HSGASS
Trigger: AGATGAAGCTCCTGAGTGGCACGGAGATTGTTGCCA...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358713.7
CDS-3UTR CCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACACAGCAATCCTTGGGTTaGACCTGCTCCCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTQQSLG*TCSRLR
Trigger: CCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTG...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCGAACCTGTGGGCTTCTaGGCGGTGGCTTCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLEPVGF*AVASFC
Trigger: ACAAAAGGAAGCCACCGCCCAGAAGCCCACAGGTTC...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACATGGCCTGAGCGGAGGTaGCTGTTGTCCCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTWPERR*LLSPSV
Trigger: CACTGAAGGGGACAACAGCCACCTCCGCTCAGGCCA...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCCTTGCCTCTGCAGCATaGCCGGTGCTTGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLLASAA*PVLALG
Trigger: CCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAG...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTAAGGCAGTCAAAGACTaGGAGCCTAAGACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASKAVKD*EPKTGK
Trigger: TTTCCCTGTCTTAGGCTCCCAGTCTTTGACTGCCTT...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp TCGGCTTGCTGGAGACTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTTTAATGGGCAGCTTCTaGAATCCCTGCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SACWRLGRGDHRGHTSGGLMGSF*NPCFSG
Trigger: GCCAGAGAAGCAGGGATTCCAGAAGCTGCCCATTAA...ACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTCCTTCTGGGAGGAGCTaGAAGATCTGGCCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGPSGRS*KIWPLS
Trigger: TGACAGGGGCCAGATCTTCCAGCTCCTCCCAGAAGG...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATAAGCTGGAGCTGGGGCTaGGGGCCGGCAGGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: PNPTPREVLNNAFTWNIISWSWG*GPAGAA
Trigger: AGCCGCACCTGCCGGCCCCCAGCCCCAGCTCCAGCT...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATGAACTCACAAGGATaGGTTGACAGCCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASMNSQG*VDSHQP
Trigger: GGGCTGATGGCTGTCAACCCATCCTTGTGAGTTCAT...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTGCTCCCTGGGGACATaGGGCCGACCCTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCCSLGT*GRPSPF
Trigger: AAAGGGAGAGGGTCGGCCCCATGTCCCCAGGGAGCA...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCGACCCAGGCAGTGCCTaGTTTAAGAGGGTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPDPGSA*FKRVCF
Trigger: AAAGCACACCCTCTTAAACCAGGCACTGCCTGGGTC...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCATACAATCAGTTGGGCTaGGGGCTCCCACATTCTGAC +
Preference number: 4 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRAYNQLG*GLPHSD
Trigger: GTCAGAATGTGGGAGCCCCCAGCCCAACTGATTGTA...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCCCGGGACAGCACAGTaGCGGCCGACATCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKPGTAQ*RPTSCL
Trigger: CAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCGGG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404158.5
ENST00000418032.3
3UTR CAA 72 bp GGATGCCTGATCCCCAGCCACTGCATAGAACTGAGGTaGGTTCGCTGGGGAGGGCTTTCAGTGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GCLIPSHCIELR*VRWGGLSVGRS
Trigger: GCTTCTTCCCACTGAAAGCCCTCCCCAGCGAACCAACCTCAGTTCTATGCAGTGGCTGGGGATCAGGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CAA 72 bp ACAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTaGAGCGCCTTCTTCTGGTTGGTTGTCATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: TKAAFSRLVCST*SAFFWLVVMQF
Trigger: GAACTGCATGACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCT +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGSSARF*LRVRHA
Trigger: AGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGA...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCCTTCATGTCACTGTGTaGGGTGCGCATGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLLHVTV*GAHVHG
Trigger: CCCGTGGACATGCGCACCTCACACAGTGACATGAAG...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTGGGCTGACAAACGCAAGCTTCCTTCAGCTGCTTaGTCATCCTTTCTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: VHGRGALVHRQAWADKRKLPSAA*SSFLVL
Trigger: AAGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAG...CTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCAGGGCATGACGACCTGTaGGCTCGCCTGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSGHDDL*ARLWPQ
Trigger: CTGGGGCCACAGGCGAGCTCACAGGTCGTCATGCCC...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTGTTGTCCCCTTCAGTaGTGCTGGGGTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCCCPLQ*CWGGLW
Trigger: CCACAGCCCACCCCAGCATCACTGAAGGGGACAACA...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCCCGCCAGCGGCACGTaGAGTCCGTCTTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKPASGT*SPSCTV
Trigger: CACAGTGCAAGACGGACTTCACGTGCCGCTGGCGGG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACAAAGGTCCCCCAGCGATaGTCCTCGTCTGCCTATGAG +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTKVPQR*SSSAYE
Trigger: CTCATAGGCAGACGAGGATCATCGCTGGGGGACCTT...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACTCTGAAAGCAAATCCTaGCAGCAACCCCTAGGTTTA +
Preference number: 4 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHSESKS*QQPLGL
Trigger: TAAACCTAGGGGTTGCTGTCAGGATTTGCTTTCAGA...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTTGTAGCAGTTGTGTTTaGAGGCGGTGGCCCTACAAA +
Preference number: 4 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLRCSSCV*RRWPYK
Trigger: TTTGTAGGGCCACCGCCTTCAAACACAACTGCTACA...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAAGTTTCCTACAGACTaGGGATATTCACACGACAGG +
Preference number: 4 (lower is better)
Translates to: AGPACKRHGTASAFPHGTKFPTD*GYSHDR
Trigger: CCTGTCGTGTGAATATCCTCAGTCTGTAGGAAACTT...GGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCCCCTGGATCTTGGAATaGAAGCCACCCTTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLPWILE*KPPFPN
Trigger: ATTGGGGAAGGGTGGCTTTCATTCCAAGATCCAGGG...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACAGTAGAGTTCCTGGGATaGGGTCAGGACGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTVEFLG*GQDGHS
Trigger: GCTATGGCCGTCCTGACCTCATCCCAGGAACTCTAC...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTGGGCTGTTCCACTCTaGGAAGGGCCGCTACAGACC +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCWAVPL*EGPLQT
Trigger: GGTCTGTAGCGGCCCTTCTCAGAGTGGAACAGCCCA...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCGAGGCAGGTGGATCATaGGGTCAGGAGATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLEAGGS*GQEIES
Trigger: GGACTCGATCTCCTGACCTCATGATCCACCTGCCTC...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS-3UTR GCA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTACCATTTTTATTTTCTTaGTCTCCACATCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLPFLFS*SPHRPL
Trigger: CAGAGGACGATGTGGAGAGCAAGAAAATAAAAATGG...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCTCTGGAGTGATGGCTTaGCAGCAGGAATGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPSGVMA*QQECSE
Trigger: CTCAGAACATTCCTGCTGGCAAGCCATCACTCCAGA...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAATCTGGAGTGATGGCTTaGCAGCAGGAATGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTESGVMA*QQECSE
Trigger: CTCAGAACATTCCTGCTGGCAAGCCATCACTCCAGA...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATTCGAGGACGCCTGCTaGCCACCTCGGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSFEDAC*PPRTRG
Trigger: GCCCCTGGTCCGAGGTGGGCAGCAGGCGTCCTCGAA...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACAGTCCGTCTTGCACTGTaGACACATGTAGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTVRLAL*THVGLP
Trigger: CGGGAGCCCTACATGTGTGCACAGTGCAAGACGGAC...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCATCAATCTCCTGTTCCTaGTGCAGCGCCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPSISCS*CSAFTK
Trigger: CTTTGTGAAGGCGCTGCAGCAGGAACAGGAGATTGA...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAATCAATCTCCTGTTCCTaGTGCAGCGCCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDESISCS*CSAFTK
Trigger: CTTTGTGAAGGCGCTGCAGCAGGAACAGGAGATTGA...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAATCAATCTCCTGTTCCTaGTGCAGCGCCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTESISCS*CSAFTK
Trigger: CTTTGTGAAGGCGCTGCAGCAGGAACAGGAGATTGA...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTCTGCTCAGGGCTGCTaGCGACCGGATCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCSAQGC*RPDPLL
Trigger: AAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGA...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GAAATCCTGACATCTGTGCGCAGCGGCTCGCCGCACACCTGGACGGCACCTCCTTGGTTTAAGAGGGTGTaGTTTGCTGTGGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: EILTSVRSGSPHTWTAPPWFKRV*FAVGRT
Trigger: TGTTCTACCCACAGCAAAGCACACCCTCTTAAACCA...AGGAGGTGCCGTCCAGGTGTGCGGCGAGCCGCTGCGCACAGATGTCAGGATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCTCTGCCCATGGCCATaGCCGTGGCCTCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKLCPWP*PWPLLP
Trigger: GGGCAACAGAGGCCACGGCCATGGCCATGGGCAGAG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCTGGGCTTCTGGGCGGTaGCTTCCTTTTGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPWASGR*LPFVFD
Trigger: GTCAAATACAAAAGGAAGCCACCGCCCAGAAGCCCA...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATATGCGCAGCGCCAGCTTaGCGGCCGCCTGTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: PNPTPREVLNNAFTWNIICAAPA*RPPVGL
Trigger: CAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCA...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGGTTGTCGCGCCTTCTTCTGGTTaGTTGTCATGCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: AFSRLVCSTLSAFFWLVVAPSSG*LSCSSH
Trigger: GTGAGAACTGCATGACAACCAACCAGAAGAAGGCGC...GACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCTTGAGCGCCTTCTTCTaGTTGGTTGTCATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASLSAFF*LVVMQF
Trigger: GAACTGCATGACAACCAACCAGAAGAAGGCGCTCAA...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp TTGACGAGCAGGCTGGTGTTGGGAACATTGGCGACGCGGATGAGGCCCTGCTGGTTGAGCGCCTTCTTCTaGTTGGTTGTCATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LTSRLVLGTLATRMRPCWLSAFF*LVVMQF
Trigger: GAACTGCATGACAACCAACCAGAAGAAGGCGCTCAA...CCAGCAGGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CCA 90 bp AGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTGAGCGGAGGTTTGAGCGCCTTCTTCTaGTTGGTTGTCATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RGDHRGHTSGGGVGLSGGLSAFF*LVVMQF
Trigger: GAACTGCATGACAACCAACCAGAAGAAGGCGCTCAA...ACCTCCGCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGTCACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGAGGAGGTACTCTCGCTaGCGGTCCACGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKRRYSR*RSTAEE
Trigger: CTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCT...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCCTGTCGGCTTGCTGGAGACTCGGCAGAGGTGACCACAGAGGCCACACTAGTGAAGGCAGTCAAAGACTaGGAGCCTAAGACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: ACRLAGDSAEVTTEATLVKAVKD*EPKTGK
Trigger: TTTCCCTGTCTTAGGCTCCCAGTCTTTGACTGCCTT...CACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCGACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CCA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTACTTATAGATCGCCATaGGAAGGCAGTCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: PSHWHEAGPACKRHGTASTYRSP*EGSQRL
Trigger: CAGTCTTTGACTGCCTTCCCATGGCGATCTATAAGT...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCGAATCCCTGCTTCTCTaGCTGGGTCTGTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPESLLL*LGLFFS
Trigger: ACTGAAGAACAGACCCAGCCAGAGAAGCAGGGATTC...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACAACATACGTATGTACGTaGGCACGGGACGCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTTYVCT*ARDALA
Trigger: TGCGAGGGCGTCCCGTGCCCACGTACATACGTATGT...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCACATACGTATGTACGTaGGCACGGGACGCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLTYVCT*ARDALA
Trigger: TGCGAGGGCGTCCCGTGCCCACGTACATACGTATGT...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTGGGCTGGAGCTCAATTaGAACCAGTGGAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGGLELN*NQWSPE
Trigger: TTCTGGGCTCCACTGGTTCCAATTGAGCTCCAGCCC...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGGGGCTGGAGCTCAATTaGAACCAGTGGAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: AHLPGARPGWLKIASIEMGLELN*NQWSPE
Trigger: TTCTGGGCTCCACTGGTTCCAATTGAGCTCCAGCCC...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCCACACGACAGGAGCCTaGGGGTTAAATGAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPHTTGA*GLNEPL
Trigger: TAAAGGCTCATTTAACCCCCAGGCTCCTGTCGTGTG...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCGGGAAGAAGCCAGCCTaGGTGCTCCTTCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCGKKPA*VLLLGG
Trigger: TCCTCCCAGAAGGAGCACCCAGGCTGGCTTCTTCCC...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCGTTTCCAGGTGCTGTTaGAGGTTCATGTCACAGGTA +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASVSRCC*RFMSQV
Trigger: TACCTGTGACATGAACCTCCAACAGCACCTGGAAAC...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCACCCGGGACAGCACAGTaGCGGCCGACATCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSPGTAQ*RPTSCL
Trigger: CAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCGGG...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS-3UTR TCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCT +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLSSARF*LRVRHA
Trigger: AGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGA...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTGGTGTGCTCCACCTTaGGCGCCTTCTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCWCAPP*APSSGW
Trigger: CCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCA...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp TTGACGAGCAGGCTGGTGTTGGGAACATTGGCGACGCGGATGAGGCCCTGCTGGTCTGAAAGCAAATCCTaGCAGCAACCCCTAGGTTTA +
Preference number: 4 (lower is better)
Translates to: LTSRLVLGTLATRMRPCWSESKS*QQPLGL
Trigger: TAAACCTAGGGGTTGCTGTCAGGATTTGCTTTCAGA...CCAGCAGGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTTATGTACGTTGTCCCTaGTGGAATGCTCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGYVRCP*WNAPWG
Trigger: TCCCCAGGGAGCATTCCATCAGGGACAACGTACATA...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCGTCCGTCTTGCACTGTaGACACATGTAGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCVRLAL*THVGLP
Trigger: CGGGAGCCCTACATGTGTGCACAGTGCAAGACGGAC...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCAAGGTGGCGCTGCCCTTaGCGGCGCTCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSRWRCP*RRSRFS
Trigger: AGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCT...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCAGCCGAGGAGCTCTTGTaGACCGCCAGGCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSAEELL*TARLGL
Trigger: CAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGC...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CGGGACAGCACAGTGGCGGCCGACATCCTGCCTGCTTGTGTCTCCAGTAGGTTCGCCCTGATGAAACTTTaGAGCCAAGAATTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: RDSTVAADILPACVSSRFALMKL*SQELRS
Trigger: AGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGC...GAACCTACTGGAGACACAAGCAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCACCCCCTCCAGCTTTCTaGTCAGGGCTGCTGCCGACC +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSPPPAF*SGLLPT
Trigger: GGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCTTGCCTCATTCCCTCTaGCCTGAAGCTTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPLPHSL*PEAFAS
Trigger: TGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCAA...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCGCCTGTCGGCTTGCTaGAGACTCGGCAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKRLSAC*RLGRGD
Trigger: GTCACCTCTGCCGAGTCTCCAGCAAGCCGACAGGCG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCCGTTGTTGGCGGCGCTaGGCAGGAAGTTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCRCWRR*AGSSSL
Trigger: CAGAGATGAACTTCCTGCCCAGCGCCGCCAACAACG...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCGTCTTCCACGGGGCCTaGCTCGCACTATTTCCACGT +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCVFHGA*LALFPR
Trigger: ACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGAC...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACAGGAGCAAGGCCAGGGTaGCTTAAGATTGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTGARPG*LKIASI
Trigger: GATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCC...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATAGGCTCGCCGCACACCTaGACGGCACCTCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIGSPHT*TAPPDL
Trigger: CAGGTCAGGAGGTGCCGTCCAGGTGTGCGGCGAGCC...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAGGAGCCCAGAACTCATaGAGACATACGTATGTACGT +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEGAQNS*RHTYVR
Trigger: ACGTACATACGTATGTCTCCATGAGTTCTGGGCTCC...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGTGCTCCCTGGGGACATaGGGCCGACCCTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKCSLGT*GRPSPF
Trigger: AAAGGGAGAGGGTCGGCCCCATGTCCCCAGGGAGCA...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCACAGTTACAATCAGTTaGGCTGGGGGCTCCCACATT +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLTVTIS*AGGSHI
Trigger: AATGTGGGAGCCCCCAGCCCAACTGATTGTAACTGT...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CAA 72 bp AGCCCTGATGAAACTTTGCAGCCAAGAATTGAGGTCTaGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SPDETLQPRIEV*PLQHGRCLLLG
Trigger: CCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
3UTR CAA 72 bp ATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAACTTaGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: MRRHQPPSPDET*QPRIEVLPLQH
Trigger: ATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGCTAGGGGGCTGGTGCCGCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACTTCCTTCAGCTGCTTaGTCATCCTTTCTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTELPSAA*SSFLVL
Trigger: AAGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAG...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCGCTTCCTTTTGTATTTaGCTCTGCCGCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: PVHAHLPGARPGWLKIASASFCI*LCRNFF
Trigger: GAAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGC...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CACAAAGGCGGCCTTCAGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGCTTCCTTTTGTATTTaGCTCTGCCGCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: HKGGLQPAGVLHLERLLLASFCI*LCRNFF
Trigger: GAAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGC...CAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAAGGCCGCCTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCCAGCAGGAATGTTCTaGGTGCCCCGAACAAGCGGG +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKPAGMF*VPRTSG
Trigger: CCCGCTTGTTCGGGGCACTCAGAACATTCCTGCTGG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCGTTCTGCAGTTTGGGTaGCGGACTGAACGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCVLQFG*RTERVQ
Trigger: CTGCACACGTTCAGTCCGTCACCCAAACTGCAGAAC...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR TCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGACAGGGCCAGCGGGATaGTGCAGCGTACAACAGGGA +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKTGPAG*CSVQQG
Trigger: TCCCTGTTGTACGCTGCATCATCCCGCTGGCCCTGT...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAATCTGAAAGCAAATCCTaGCAGCAACCCCTAGGTTTA +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDESESKS*QQPLGL
Trigger: TAAACCTAGGGGTTGCTGTCAGGATTTGCTTTCAGA...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CGGGACAGCACAGTGGCGGCCGACATCCTGCCTGCTTGTGTCTCCAGTAGGTTCAGCCTGGGGGTTAAATaGGCCTTTATTAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: RDSTVAADILPACVSSRFSLGVK*AFIRML
Trigger: CAACATTCTAATAAAGGCTCATTTAACCCCCAGGCT...GAACCTACTGGAGACACAAGCAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR TCA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCAAGTTTCCTACAGACTaGGGATATTCACACGACAGG +
Preference number: 4 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPKFPTD*GYSHDR
Trigger: CCTGTCGTGTGAATATCCTCAGTCTGTAGGAAACTT...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGGCGAGGTGTGAACTCTaGGATCTCCCCAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKARCEL*DLPSPV
Trigger: GACAGGGCTGGGGAGATCTCAGAGTTCACACCTCGC...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCACAACAGGCGAGGTGTaGACTCTGAGATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCTTGEV*TLRSPQ
Trigger: CTGGGGAGATCTCAGAGTTCACACCTCGCCTGTTGT...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCACACAATAAATACAAGTaGCAGCCTCCACACCCAAAG +
Preference number: 4 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPHNKYK*QPPHPK
Trigger: CTTTGGGTGTGGAGGCTGTCACTTGTATTTATTGTG...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACACAATAAATACAAGTaGCAGCCTCCACACCCAAAG +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTEHNKYK*QPPHPK
Trigger: CTTTGGGTGTGGAGGCTGTCACTTGTATTTATTGTG...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAACACAATAAATACAAGTaGCAGCCTCCACACCCAAAG +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEHNKYK*QPPHPK
Trigger: CTTTGGGTGTGGAGGCTGTCACTTGTATTTATTGTG...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGGGCCGTGGCCTCTGTTaGCCTCAGCAATCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKGRGLC*PQQSLG
Trigger: ACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCC...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCCAAGAATTGAGGTCTTaGCTCTGCAGCATGGCCGGT +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLQELRS*LCSMAG
Trigger: ACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTG...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAGCCCTGATGAAACTTTaGAGCCAAGAATTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEALMKL*SQELRS
Trigger: AGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGC...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATAAGCTGGAGCGAGGGCTaGCTCGGCCATCCCTGCATC +
Preference number: 4 (lower is better)
Translates to: PNPTPREVLNNAFTWNIISWSEG*LGHPCI
Trigger: GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCT...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCAGCTTCTGGAATCCCTaGTTCTCTGGCTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLSFWNP*FSGWVC
Trigger: ACAGACCCAGCCAGAGAAGCAGGGATTCCAGAAGCT...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACAAGCTTCTGGAATCCCTaGTTCTCTGGCTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTSFWNP*FSGWVC
Trigger: ACAGACCCAGCCAGAGAAGCAGGGATTCCAGAAGCT...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TCGGCTTGCTGGAGACTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTATTAAAGTCCCTAACTaGATGGGTAGGAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: SACWRLGRGDHRGHTSGGIKVPN*MGRKTR
Trigger: CCTGGTTTTCCTACCCATGCAGTTAGGGACTTTAAT...ACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAGTCTCCAGCAAGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR GCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTGGAACCGTTTCCAGGTaGTGTTGGAGGTTCATGTCA +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGGTVSR*CWRFMS
Trigger: TGACATGAACCTCCAACAGCACCTGGAAACGGTTCC...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTTGGGCTTCTGGGCGGTaGCTTCCTTTTGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGWASGR*LPFVFD
Trigger: GTCAAATACAAAAGGAAGCCACCGCCCAGAAGCCCA...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAACTTATAGATCGCCATaGGAAGGCAGTCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDETYRSP*EGSQRL
Trigger: CAGTCTTTGACTGCCTTCCCATGGCGATCTATAAGT...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATAATGGAGGCGTTCAGCTaGAGCGAGGGCTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIMEAFS*SEGCLG
Trigger: GCCGAGGCAGCCCTCGCTCCAGCTGAACGCCTCCAT...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGGGGAAGAAGCCAGCCTaGGTGCTCCTTCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKGKKPA*VLLLGG
Trigger: TCCTCCCAGAAGGAGCACCCAGGCTGGCTTCTTCCC...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCGGTTCCAAGGGCACTTaGCCATTCCAAACCCTACCC +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCGSKGT*PFQTLP
Trigger: GGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACC...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CAA 72 bp TTCATGTCACAGGTAACAGGGGACAGTTACAATCAGTaGGGCTGGGGGCTCCCACATTCTGACGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: FMSQVTGDSYNQ*GWGLPHSDGLQ
Trigger: CTGCAAGCCGTCAGAATGTGGGAGCCCCCAGCCCAACTGATTGTAACTGTCCCCTGTTACCTGTGACATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATGTTGTCCCCTTCAGTaGTGCTGGGGTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSCCPLQ*CWGGLW
Trigger: CCACAGCCCACCCCAGCATCACTGAAGGGGACAACA...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGGTTTGGGTGACGGACTaGACGTGTGCAGGACACCTC +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKVWVTD*TCAGHL
Trigger: GAGGTGTCCTGCACACGTTCAGTCCGTCACCCAAAC...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCAAGTTTCCTACAGACTaGGGATATTCACACGACAGG +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLKFPTD*GYSHDR
Trigger: CCTGTCGTGTGAATATCCTCAGTCTGTAGGAAACTT...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTGTCTACAGAGCAGCTaGCAGAGGGAACCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCCLQSS*QREPFP
Trigger: TGGAAACGGTTCCCTCTGTCAGCTGCTCTGTAGACA...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGTGTCACTGTGTGAGGTaGGCATGTCCACGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKCHCVR*ACPRAH
Trigger: ATGGGCCCGTGGACATGCGCACCTCACACAGTGACA...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGTTGAGGTCTTGCCTCTaGAGCATGGCCGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKLRSCL*SMAGAC
Trigger: GCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAA...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCCAAGAATTGAGGTCTTaGCTCTGCAGCATGGCCGGT +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCQELRS*LCSMAG
Trigger: ACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTG...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCGCCCTGATGAAACTTTaGAGCCAAGAATTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLALMKL*SQELRS
Trigger: AGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGC...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp AGCCGGCTGGTGTGCTCCACCTTGAGCGCCTTCTTCTGGTTGGTTGTCATGCAGGCCCTGATGAAACTTTaGAGCCAAGAATTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SRLVCSTLSAFFWLVVMQALMKL*SQELRS
Trigger: AGACCTCAATTCTTGGCTGCAAAGTTTCATCAGGGC...CTGCATGACAACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR GCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGTGCCTCGGCCATCCCTaGATCTGTCAGTCAGTCACG +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKCLGHP*ICQSVT
Trigger: CGTGACTGACTGACAGATGCAGGGATGGCCGAGGCA...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCAGCTTCTGGAATCCCTaGTTCTCTGGCTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCSFWNP*FSGWVC
Trigger: ACAGACCCAGCCAGAGAAGCAGGGATTCCAGAAGCT...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCCTGATCCCCAGCCACTaGATAGAACTGAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLLIPSH*IELRLV
Trigger: AACCAACCTCAGTTCTATGCAGTGGCTGGGGATCAG...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGTGGCGGCCGACATCCTaGCTGCTTGTGTCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKWRPTS*LLVSPV
Trigger: TACTGGAGACACAAGCAGGCAGGATGTCGGCCGCCA...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCCTTCAAGGCCACCGTaGTCAGCCCATTCACTCTCG +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKPSRPP*SAHSLS
Trigger: CGAGAGTGAATGGGCTGACCACGGTGGCCTTGAAGG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCACGAGCAGGCTGGTGTTaGGAACATTGGCGACGCGGA +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSRAGWC*EHWRRG
Trigger: TCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCG...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp TTTGACTCTGCCGCAACTTTTTCAACAACACGAGTTTTGCTTCTTCTAACCTCACACCTCGGGGCGTCGTaGCCGAACCCCGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: FDSAATFSTTRVLLLLTSHLGAS*PNPGTA
Trigger: AGCTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTG...TGAGGTTAGAAGAAGCAAAACTCGTGTTGTTGAAAAAGTTGCGGCAGAGTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGACATACGTATGTACGTaGGCACGGGACGCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKTYVCT*ARDALA
Trigger: TGCGAGGGCGTCCCGTGCCCACGTACATACGTATGT...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGGGAGCCCAGAACTCATaGAGACATACGTATGTACGT +
Preference number: 4 (lower is better)
Translates to: AHLPGARPGWLKIASIEMGAQNS*RHTYVR
Trigger: ACGTACATACGTATGTCTCCATGAGTTCTGGGCTCC...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCCTTCTGGGAGGAGCTaGAAGATCTGGCCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKPSGRS*KIWPLS
Trigger: TGACAGGGGCCAGATCTTCCAGCTCCTCCCAGAAGG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGGAGGTGACTTCGGTCTaGATGCCTGATCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKEVTSV*MPDPQP
Trigger: TGGCTGGGGATCAGGCATCCAGACCGAAGTCACCTC...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTACAATCAGTTGGGCTaGGGGCTCCCACATTCTGAC +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCYNQLG*GLPHSD
Trigger: GTCAGAATGTGGGAGCCCCCAGCCCAACTGATTGTA...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CAA 72 bp AGAGCAGCTGACAGAGGGAACCGTTTCCAGGTGCTGTaGGAGGTTCATGTCACAGGTAACAGGGGACAGTTA +
Preference number: 4 (lower is better)
Translates to: RAADRGNRFQVL*EVHVTGNRGQL
Trigger: TAACTGTCCCCTGTTACCTGTGACATGAACCTCCAACAGCACCTGGAAACGGTTCCCTCTGTCAGCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCGCTTCCTTTTGTATTTaGCTCTGCCGCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLASFCI*LCRNFF
Trigger: GAAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGC...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTGTCTGCCGGTCCTGCTaGCCAGGGCTGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLVCRSC*PGLWPR
Trigger: CCTCGGCCACAGCCCTGGTCAGCAGGACCGGCAGAC...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCCCTGTGCTGGAATGTTaGCTAATGCTGTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLPVLEC*LMLWIC
Trigger: GCAAATCCACAGCATTAGGCAACATTCCAGCACAGG...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTCCTGTGCAGGGGCCGTaGCCTGCTGCAGGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLPVQGP*PAAGAA
Trigger: AGCGGCTCCTGCAGCAGGGCACGGCCCCTGCACAGG...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCACACATCGTCCTCTGTTaGGTCCCGTTCAAGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSHIVLC*VPFKRS
Trigger: CGAGCGCTTGAACGGGACCCAACAGAGGACGATGTG...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCACGCACTATTTCCACGTaGCTGACTGGGGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSRTIST*LTGGWS
Trigger: GCTCCATCCCCCAGTCAGCCACGTGGAAATAGTGCG...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCAGAACAAGCAGCAATaGAGGCGTTCAGCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKQNKQQ*RRSAGA
Trigger: CGCTCCAGCTGAACGCCTCCATTGCTGCTTGTTCTG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTAATGGGCAGCTTCTaGAATCCCTGCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCLMGSF*NPCFSG
Trigger: GCCAGAGAAGCAGGGATTCCAGAAGCTGCCCATTAA...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACAGTTTCCAGGTGCTGTTaGAGGTTCATGTCACAGGTA +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTVSRCC*RFMSQV
Trigger: TACCTGTGACATGAACCTCCAACAGCACCTGGAAAC...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACACTTCCTTCAGCTGCTTaGTCATCCTTTCTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTLPSAA*SSFLVL
Trigger: AAGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAG...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTTCACAGTGTCCAGGGTaGGCCGCCCGTGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLSQCPG*AARVPA
Trigger: TGCCGGCACACGGGCGGCTCACCCTGGACACTGTGA...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCTPCSA*FFGHSE
Trigger: TTCAGAATGACCGAAGAAGCATGCCGAACACGGAGT...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000418032.3
CDS-3UTR CCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATACGTTGTTGGCGGCGCTaGGCAGGAAGTTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIRCWRR*AGSSSL
Trigger: CAGAGATGAACTTCCTGCCCAGCGCCGCCAACAACG...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp TTTGACTCTGCCGCAACTTTTTCAACAACACGAGTTTTGCTTCTTCTAACCTCATTCCACGTGGCTGACTaGGGGATGGAGCGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FDSAATFSTTRVLLLLTSFHVAD*GMERGG
Trigger: CCCACCCCGCTCCATCCCCCAGTCAGCCACGTGGAA...TGAGGTTAGAAGAAGCAAAACTCGTGTTGTTGAAAAAGTTGCGGCAGAGTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCAAGGCAGTCAAAGACTaGGAGCCTAAGACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCKAVKD*EPKTGK
Trigger: TTTCCCTGTCTTAGGCTCCCAGTCTTTGACTGCCTT...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTCTGCAGCATGGCCGGTaGTTGCTCTTGGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLLQHGR*LLLGRA
Trigger: TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAG...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTAGCTGGAGCGAGGGCTaGCTCGGCCATCCCTGCATC +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLSWSEG*LGHPCI
Trigger: GATGCAGGGATGGCCGAGGCAGCCCTCGCTCCAGCT...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGTGGGCTTCTGGGCGGTaGCTTCCTTTTGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKWASGR*LPFVFD
Trigger: GTCAAATACAAAAGGAAGCCACCGCCCAGAAGCCCA...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCACACGACAGGAGCCTaGGGGTTAAATGAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKHTTGA*GLNEPL
Trigger: TAAAGGCTCATTTAACCCCCAGGCTCCTGTCGTGTG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCAAATAATGCCTTCACCTaGAACATCATAAACGTCATA +
Preference number: 4 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPNNAFT*NIINVI
Trigger: TATGACGTTTATGATGTTCCAGGTGAAGGCATTATT...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAAAATAATGCCTTCACCTaGAACATCATAAACGTCATA +
Preference number: 4 (lower is better)
Translates to: KPAQPARDTERLLPFLTENNAFT*NIINVI
Trigger: TATGACGTTTATGATGTTCCAGGTGAAGGCATTATT...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACAAATTCTTCCTTCAGCTaGTTGATCATCCTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTNSSFS*LIILSR
Trigger: ACGAGAAAGGATGATCAAGCAGCTGAAGGAAGAATT...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCAATTCTTCCTTCAGCTaGTTGATCATCCTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLNSSFS*LIILSR
Trigger: ACGAGAAAGGATGATCAAGCAGCTGAAGGAAGAATT...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCACACATTCTGACGGCTTaGAGGAACCTGATCCTGGTA +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSHILTA*RNLILV
Trigger: TACCAGGATCAGGTTCCTGCAAGCCGTCAGAATGTG...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCAGGAACCGTTTCCAGGTaGTGTTGGAGGTTCATGTCA +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSGTVSR*CWRFMS
Trigger: TGACATGAACCTCCAACAGCACCTGGAAACGGTTCC...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGTTGAGCGCCTTCTTCTaGTTGGTTGTCATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKLSAFF*LVVMQF
Trigger: GAACTGCATGACAACCAACCAGAAGAAGGCGCTCAA...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCTTCCTTCAGCTGCTTaGTCATCCTTTCTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKLPSAA*SSFLVL
Trigger: AAGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTCCAGCAGGAATGTTCTaGGTGCCCCGAACAAGCGGG +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLPAGMF*VPRTSG
Trigger: CCCGCTTGTTCGGGGCACTCAGAACATTCCTGCTGG...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTTGGGCTGTGGGATGTTaGCGAGCAGGCTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLWAVGC*RAGWCW
Trigger: CCAACACCAGCCTGCTCGTCAACATCCCACAGCCCA...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTTGTTGTCCCCTTCAGTaGTGCTGGGGTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLCCPLQ*CWGGLW
Trigger: CCACAGCCCACCCCAGCATCACTGAAGGGGACAACA...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCAACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSTPCSA*FFGHSE
Trigger: TTCAGAATGACCGAAGAAGCATGCCGAACACGGAGT...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358713.7
ENST00000360315.7
CDS-3UTR GCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCAATTCTTCCTTCAGCTaGTTGATCATCCTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCNSSFS*LIILSR
Trigger: ACGAGAAAGGATGATCAAGCAGCTGAAGGAAGAATT...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTGAGGGGTGGTCACGGTaGTCCCAACAGAACCTGTGG +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLEGWSR*SQQNLW
Trigger: CCACAGGTTCTGTTGGGAGCACCGTGACCACCCCTC...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCACCTGTGCTGGAATGTTaGCTAATGCTGTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSPVLEC*LMLWIC
Trigger: GCAAATCCACAGCATTAGGCAACATTCCAGCACAGG...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTTTCAGCCGGCTGGTGTaGTCCACCTTGAGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLFSRLV*STLSAF
Trigger: GAAGGCGCTCAAGGTGGAGCACACCAGCCGGCTGAA...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTAAGGTCCCCCAGCGATaGTCCTCGTCTGCCTATGAG +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLKVPQR*SSSAYE
Trigger: CTCATAGGCAGACGAGGATCATCGCTGGGGGACCTT...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR TCA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATCTGAAAGCAAATCCTaGCAGCAACCCCTAGGTTTA +
Preference number: 4 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSSESKS*QQPLGL
Trigger: TAAACCTAGGGGTTGCTGTCAGGATTTGCTTTCAGA...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR TCA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGAGCCTGGGGGTTAAATaGGCCTTTATTAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKSLGVK*AFIRML
Trigger: CAACATTCTAATAAAGGCTCATTTAACCCCCAGGCT...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR GCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATACCTGTGCTGGAATGTTaGCTAATGCTGTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIPVLEC*LMLWIC
Trigger: GCAAATCCACAGCATTAGGCAACATTCCAGCACAGG...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTGCCGAGGCTGAGTTCTaGAGTTTGGGTGACGGACTG +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLAEAEF*SLGDGL
Trigger: CAGTCCGTCACCCAAACTGCAGAACTCAGCCTCGGC...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTGAACCTGTGGGCTTCTaGGCGGTGGCTTCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLEPVGF*AVASFC
Trigger: ACAAAAGGAAGCCACCGCCCAGAAGCCCACAGGTTC...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CCA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCAATAATGCCTTCACCTaGAACATCATAAACGTCATA +
Preference number: 4 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCNNAFT*NIINVI
Trigger: TATGACGTTTATGATGTTCCAGGTGAAGGCATTATT...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR GCA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATAATTAAAGTCCCTAACTaGATGGGTAGGAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIIKVPN*MGRKTR
Trigger: CCTGGTTTTCCTACCCATGCAGTTAGGGACTTTAAT...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CAA 72 bp CTGGAACATCATAAACGTCATAATACAACAACCCGCTaGGGGCTTATCGTAGAGGTTATGCTGCAAGGAACT +
Preference number: 4 (lower is better)
Translates to: LEHHKRHNTTTR*GLIVEVMLQGT
Trigger: AGTTCCTTGCAGCATAACCTCTACGATAAGCCCCAAGCGGGTTGTTGTATTATGACGTTTATGATGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
3UTR CAA 72 bp TTTGACTCTGCCGCAACTTTTTCAACAACACGAGTTTaGCTTCTTCTAACCTCAATTCTTCCTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FDSAATFSTTRV*LLLTSILPSAA
Trigger: AGCAGCTGAAGGAAGAATTGAGGTTAGAAGAAGCAAAACTCGTGTTGTTGAAAAAGTTGCGGCAGAGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CCA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTACTTATAGATCGCCATaGGAAGGCAGTCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLTYRSP*EGSQRL
Trigger: CAGTCTTTGACTGCCTTCCCATGGCGATCTATAAGT...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS CCA 90 bp GACGGCGGCCGACGGCCTCGGGCGGCGCAGTCCGGTCAGGTCTTGTaGCGTCCCGCGGAGGCGACTCCCTCAGGTGGCGCCCGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: DGGRRPRAAQSGQVL*RPAEATPSGGARGG
Trigger: GCCGCCGCGGGCGCCACCTGAGGGAGTCGCCTCCGCGGGACGCCACAAGACCTGACCGGACTGCGCCGCCCGAGGCCGTCGGCCGCCGTC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360315.7
ENST00000417582.6
ENST00000494516.6
ENST00000609040.5
CDS-3UTR CAA 90 bp GGACACCTCGGGGCGTCGTGGCCGAACCCCGGGACAGCTGGCTGGAGGCCTGCTCCCCGGGCGCTGGCCTaGCCCATGCGCATCACAGTG +
Preference number: 5 (lower is better)
Translates to: GHLGASWPNPGTAGWRPAPRALA*PMRITV
Trigger: CACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGGG...AGCAGGCCTCCAGCCAGCTGTCCCGGGGTTCGGCCACGACGCCCCGAGGTGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CAA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGGGGGCTGCCACTGGGTaGCCTCATTCCCTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRGAATG*PHSLCP
Trigger: AGGGCAGAGGGAATGAGGCAACCCAGTGGCAGCCCC...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
73% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGTGGCCGTGGCCTCTGTaGCCCTCAGCAATCCTTGGG +
Preference number: 5 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRWPWPL*PSAILG
Trigger: CCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCA...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGGTCTTCTCCAGCTGTTaGCGCAGCGCCAGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRVFSSC*RSASLA
Trigger: CGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGAC...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGAGGTGGCGCTGCCCTaGCCGGCGCTCACGGTTCTC +
Preference number: 5 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPEVALP*PALTVL
Trigger: GAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTC...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CGAGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGCCCCGGGCGCTGGCCTaGCCCATGCGCATCACAGTG +
Preference number: 5 (lower is better)
Translates to: RGLPRPSLHLSVSHGGGPPRALA*PMRITV
Trigger: CACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGGG...CGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp TTGCGCAGCGCCAGCTTGGCGGCCGCCTGTCGGCTTGCTGGAGACTCGGCAGAGCAGTCCGGTCAGGTCTaGTGGCGTCCCGCGGAGGCG +
Preference number: 5 (lower is better)
Translates to: LRSASLAAACRLAGDSAEQSGQV*WRPAEA
Trigger: CGCCTCCGCGGGACGCCACAAGACCTGACCGGACTG...CTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS-3UTR CAA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGCTCGAGGGCTGCTCGTaGTCGGAGAGCACAATCACG +
Preference number: 5 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRLEGCS*SESTIT
Trigger: CGTGATTGTGCTCTCCGACAACGAGCAGCCCTCGAG...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCGGCCGCCTGTCGGCTaGCTGGAGACTCGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGRPPVG*LETRQR
Trigger: CCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCG...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTTTGCGCAGCGCCAGCTaGGCGGCCGCCTGTCGGCTT +
Preference number: 5 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGLRSAS*AAACRL
Trigger: AAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCAA...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGAGGTGGCGCTGCCCTaGCCGGCGCTCACGGTTCTC +
Preference number: 5 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQEVALP*PALTVL
Trigger: GAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTC...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGCCCCGGGCGCTGGCCTaGCCCATGCGCATCACAGTG +
Preference number: 5 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQPRALA*PMRITV
Trigger: CACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGGG...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGCGGCCGCCTGTCGGCTaGCTGGAGACTCGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPRPPVG*LETRQR
Trigger: CCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCG...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTATTGCGCAGCGCCAGCTaGGCGGCCGCCTGTCGGCTT +
Preference number: 5 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLLRSAS*AAACRL
Trigger: AAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCAA...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGCCGGTGCTTGCTCTaGGGGCGGGCACGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: AAWPVLALGAGTVSSRASGRCLL*GRARCL
Trigger: AAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCC...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTGGCCGGTGCTTGCTCTaGGGGCGGGCACGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGGRCLL*GRARCL
Trigger: AAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCC...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CAGGAGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGCAGCATGGCCGGTGCTaGCTCTTGGGGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: QEVLSLAVHGRGALVHRQQHGRC*LLGRAR
Trigger: CCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTG...CTGGCGGTGCACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GGTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTCGGCCGCCTGTCGGCTaGCTGGAGACTCGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GPACAEGRLLPVGGGAALRPPVG*LETRQR
Trigger: CCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCG...AAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAGAGGTGGCGCTGCCCTaGCCGGCGCTCACGGTTCTC +
Preference number: 5 (lower is better)
Translates to: RARCLPEPAEGGAVGPSREVALP*PALTVL
Trigger: GAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTC...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACAGCATGGCCGGTGCTaGCTCTTGGGGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRQHGRC*LLGRAR
Trigger: CCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTG...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTGGGGCTGCCACTGGGTaGCCTCATTCCCTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLGAATG*PHSLCP
Trigger: AGGGCAGAGGGAATGAGGCAACCCAGTGGCAGCCCC...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS TCA 90 bp TTCGGCATGCTTCTTCGGTCATTCGAAGTTGCTCGGCGCCCTCGCTaGCGGCGGCCGACGGCCTCGGGCGGCGCAGTCCGGTCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: FGMLLRSFEVARRPR*RRPTASGGAVRSGL
Trigger: AAGACCTGACCGGACTGCGCCGCCCGAGGCCGTCGGCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGAATGACCGAAGAAGCATGCCGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS GCA 90 bp CTGACTCCGTGTTCGGCATGCTTCTTCGGTCATTCTGAACGAAGTTaGTCGGCGCCCTCGCTGACGGCGGCCGACGGCCTCGGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: LTPCSACFFGHSERS*SAPSLTAADGLGRR
Trigger: GCGCCGCCCGAGGCCGTCGGCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360315.7
ENST00000417582.6
CDS CCA 90 bp CCACGGGCCCATCGCCCACCAGCCCTTCGCCTCTGCCCATGGCCATaGCCGTGGCCTCTGTTGCCCTCAGCAATCCTTGGGTTGGACCTG +
Preference number: 5 (lower is better)
Translates to: PRAHRPPALRLCPWP*PWPLLPSAILGLDL
Trigger: CAGGTCCAACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCATGGCCATGGGCAGAGGCGAAGGGCTGGTGGGCGATGGGCCCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000609040.5
ENST00000683918.1
CDS-3UTR CAA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCTCAGCAATCCTTGGGTaGGACCTGCTCCCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: RAASAIPASVSQSRGRAGSAILG*DLLPAQ
Trigger: CTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGA...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTGTCTTCTCCAGCTGTTaGCGCAGCGCCAGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLVFSSC*RSASLA
Trigger: CGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGAC...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGGTCTTCTCCAGCTGTTaGCGCAGCGCCAGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRVFSSC*RSASLA
Trigger: CGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGAC...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS TCA 90 bp CATGCTTCTTCGGTCATTCTGAACGAAGTTGCTCGGCGCCCTCGCTaGCGGCGGCCGACGGCCTCGGGCGGCGCAGTCCGGTCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: HASSVILNEVARRPR*RRPTASGGAVRSGL
Trigger: AAGACCTGACCGGACTGCGCCGCCCGAGGCCGTCGGCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGTTCAGAATGACCGAAGAAGCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360315.7
ENST00000417582.6
CDS TCA 90 bp GCTTCGAGGACGCCTGCTGCCCACCTCGGACCAGGGGCGGGGGTATaGCACTGCCGGGCATCCGAGCTGAAGAGGTCTGGAGTGATGGCT +
Preference number: 5 (lower is better)
Translates to: ASRTPAAHLGPGAGV*HCRASELKRSGVMA
Trigger: AGCCATCACTCCAGACCTCTTCAGCTCGGATGCCCGGCAGTGTCATACCCCCGCCCCTGGTCCGAGGTGGGCAGCAGGCGTCCTCGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000683918.1
CDS GCA 90 bp AGGTGCGCATGTCCACGGGCCCATCGCCCACCAGCCCTTCGCCTCTaGCCATGGCCATGGCCGTGGCCTCTGTTGCCCTCAGCAATCCTT +
Preference number: 5 (lower is better)
Translates to: RCACPRAHRPPALRL*PWPWPWPLLPSAIL
Trigger: AAGGATTGCTGAGGGCAACAGAGGCCACGGCCATGGCCATGGGCAGAGGCGAAGGGCTGGTGGGCGATGGGCCCGTGGACATGCGCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000609040.5
ENST00000683918.1
CDS GCA 90 bp GTGGCTGTTGTCCCCTTCAGTGATGCTGGGGTGGGCTGTGTGAGGTaGGCATGTCCACGGGCCCATCGCCCACCAGCCCTTCGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: VAVVPFSDAGVGCVR*ACPRAHRPPALRLC
Trigger: GCAGAGGCGAAGGGCTGGTGGGCGATGGGCCCGTGGACATGCGCACCTCACACAGCCCACCCCAGCATCACTGAAGGGGACAACAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS CCA 90 bp GCATGTCCACGGGCCCATCGCCCACCAGCCCTTCGCCTCTGCCCATaGCCATGGCCGTGGCCTCTGTTGCCCTCAGCAATCCTTGGGTTG +
Preference number: 5 (lower is better)
Translates to: ACPRAHRPPALRLCP*PWPWPLLPSAILGL
Trigger: CAACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCATGGCCATGGGCAGAGGCGAAGGGCTGGTGGGCGATGGGCCCGTGGACATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000609040.5
ENST00000683918.1
CDS-3UTR CAA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTCAGTCCGGTCAGGTCTaGTGGCGTCCCGCGGAGGCG +
Preference number: 5 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPQSGQV*WRPAEA
Trigger: CGCCTCCGCGGGACGCCACAAGACCTGACCGGACTG...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360315.7
CDS-3UTR CAA 90 bp GGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTATGGCCGTGGCCTCTGTaGCCCTCAGCAATCCTTGGG +
Preference number: 5 (lower is better)
Translates to: GGHGVFPSQRRVVQWVLLWPWPL*PSAILG
Trigger: CCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCA...TAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTGGGCTGACAAACGCAAGGGCCGGTGCTTGCTCTaGGGGCGGGCACGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: VHGRGALVHRQAWADKRKGRCLL*GRARCL
Trigger: AAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCC...CTTGCGTTTGTCAGCCCAAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GGATCATGTCCAGGAGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTCAGCATGGCCGGTGCTaGCTCTTGGGGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: GSCPGGTLAGGPRPRSSCQHGRC*LLGRAR
Trigger: CCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTG...ACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCTGGACATGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGTGCTGGTCCTACCAGTaGGCCATGGCCACAGTGACA +
Preference number: 5 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLCWSYQ*AMATVT
Trigger: TGTCACTGTGGCCATGGCCAACTGGTAGGACCAGCA...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS-3UTR CAA 90 bp GGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACTCAGCAATCCTTGGGTaGGACCTGCTCCCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: GGGGGSPSSTGPGSHYFHSAILG*DLLPAQ
Trigger: CTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGA...GTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp TGGAGGTGGCGCTGCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTGGCCGTGGCCTCTGTaGCCCTCAGCAATCCTTGGG +
Preference number: 5 (lower is better)
Translates to: WRWRCPCRRSRFSQNVCRWPWPL*PSAILG
Trigger: CCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCA...CCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGGTGGGCTGTGGGATGTaGACGAGCAGGCTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPVGCGM*TSRLVL
Trigger: CAACACCAGCCTGCTCGTCAACATCCCACAGCCCAC...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCTTGCGCAGCGCCAGCTaGGCGGCCGCCTGTCGGCTT +
Preference number: 5 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPLRSAS*AAACRL
Trigger: AAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCAA...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp GGCCAGGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTCTGGTGTGCTCCACCTaGAGCGCCTTCTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GQVGEEGARLPRGLARTILVCST*SAFFWL
Trigger: CAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAG...AATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGCTGGTGTGCTCCACCTaGAGCGCCTTCTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRLVCST*SAFFWL
Trigger: CAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAG...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CACCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTGAGGTGGCGCTGCCCTaGCCGGCGCTCACGGTTCTC +
Preference number: 5 (lower is better)
Translates to: HLCTLTSQEQGQGGLRLREVALP*PALTVL
Trigger: GAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTC...ACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAAGAGGTGGCGCTGCCCTaGCCGGCGCTCACGGTTCTC +
Preference number: 5 (lower is better)
Translates to: KPAQPARDTERLLPFLTEEVALP*PALTVL
Trigger: GAGAACCGTGAGCGCCGGCAAGGGCAGCGCCACCTC...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAACAGCATGGCCGGTGCTaGCTCTTGGGGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEQHGRC*LLGRAR
Trigger: CCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTG...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCCCGGGCGCTGGCCTaGCCCATGCGCATCACAGTG +
Preference number: 5 (lower is better)
Translates to: KPAQPARDTERLLPFLTEPRALA*PMRITV
Trigger: CACTGTGATGCGCATGGGCAAGGCCAGCGCCCGGGG...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp TGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTAGGGCTGGAGCTCAATaGGAACCAGTGGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: WGGHGVFPSQRRVVQWVLRAGAQ*EPVEPR
Trigger: TCTGGGCTCCACTGGTTCCAATTGAGCTCCAGCCCT...AAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp GGCCAGGTGGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTAGGGCTGGAGCTCAATaGGAACCAGTGGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: GQVGEEGARLPRGLARTIRAGAQ*EPVEPR
Trigger: TCTGGGCTCCACTGGTTCCAATTGAGCTCCAGCCCT...AATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCCACCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CAA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGTGCATAGAACTGAGGTaGGTTCGCTGGGGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLCIELR*VRWGGL
Trigger: AAGCCCTCCCCAGCGAACCAACCTCAGTTCTATGCA...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCTGCATAGAACTGAGGTaGGTTCGCTGGGGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: RAASAIPASVSQSRGRAGCIELR*VRWGGL
Trigger: AAGCCCTCCCCAGCGAACCAACCTCAGTTCTATGCA...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGACTCACAAGGATGGGTaGACAGCCATCAGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLTHKDG*TAISPG
Trigger: TCCAGGGCTGATGGCTGTCAACCCATCCTTGTGAGT...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGAATACAACAACCCGCTaGGGGCTTATCGTAGAGGTT +
Preference number: 5 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRNTTTR*GLIVEV
Trigger: AACCTCTACGATAAGCCCCAAGCGGGTTGTTGTATT...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS CCA 90 bp CTGCCCATGGCCATGGCCGTGGCCTCTGTTGCCCTCAGCAATCCTTaGGTTGGACCTGCTCCCGGCTCAGGTGTCACCCTCATGTCTCCG +
Preference number: 5 (lower is better)
Translates to: LPMAMAVASVALSNP*VGPAPGSGVTLMSP
Trigger: CGGAGACATGAGGGTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCATGGCCATGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS-3UTR CAA 90 bp CGCAAGGGTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTTCAGCAATCCTTGGGTaGGACCTGCTCCCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: RKGPACAEGRLLPVGGGASAILG*DLLPAQ
Trigger: CTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGA...AGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGACCCTTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACTCGAGGGCTGCTCGTaGTCGGAGAGCACAATCACG +
Preference number: 5 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRLEGCS*SESTIT
Trigger: CGTGATTGTGCTCTCCGACAACGAGCAGCCCTCGAG...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGGGCGGTGGCTTCCTTTaGTATTTGACTCTGCCGCAA +
Preference number: 5 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLGGGFL*YLTLPQ
Trigger: TTGCGGCAGAGTCAAATACAAAAGGAAGCCACCGCC...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATACGAGCAGGCTGGTGTaGGGAACATTGGCGACGCGG +
Preference number: 5 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDTSRLV*GTLATR
Trigger: CCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGT...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAGTGGGCTGTGGGATGTaGACGAGCAGGCTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRVGCGM*TSRLVL
Trigger: CAACACCAGCCTGCTCGTCAACATCCCACAGCCCAC...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCTTGCGCAGCGCCAGCTaGGCGGCCGCCTGTCGGCTT +
Preference number: 5 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLLRSAS*AAACRL
Trigger: AAGCCGACAGGCGGCCGCCAAGCTGGCGCTGCGCAA...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCGGCCGGTGCTTGCTCTaGGGGCGGGCACGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPGRCLL*GRARCL
Trigger: AAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCC...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCCCACATTCTGACGGCTaGCAGGAACCTGATCCTGGT +
Preference number: 5 (lower is better)
Translates to: AAWPVLALGAGTVSSRASPHSDG*QEPDPG
Trigger: ACCAGGATCAGGTTCCTGCAAGCCGTCAGAATGTGG...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp GCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGACAGTTACAATCAGTaGGGCTGGGGGCTCCCACAT +
Preference number: 5 (lower is better)
Translates to: AAWPVLALGAGTVSSRASDSYNQ*GWGLPH
Trigger: ATGTGGGAGCCCCCAGCCCAACTGATTGTAACTGTC...GCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCCGTTTCCAGGTGCTGTaGGAGGTTCATGTCACAGGT +
Preference number: 5 (lower is better)
Translates to: RAASAIPASVSQSRGRAGRFQVL*EVHVTG
Trigger: ACCTGTGACATGAACCTCCAACAGCACCTGGAAACG...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGAGGTTCCAAGGGCACTaGGCCATTCCAAACCCTACC +
Preference number: 5 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQRFQGH*AIPNPT
Trigger: GGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCT...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS TCA 90 bp GCGCTCGTTTCTGACTCCGTGTTCGGCATGCTTCTTCGGTCATTCTaGACGAAGTTGCTCGGCGCCCTCGCTGACGGCGGCCGACGGCCT +
Preference number: 5 (lower is better)
Translates to: ALVSDSVFGMLLRSF*TKLLGALADGGRRP
Trigger: AGGCCGTCGGCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360315.7
ENST00000417582.6
CDS GCA 90 bp TGTTGGGTCCCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAACGGGCCGCGGGTCGGCCGGGCCCT +
Preference number: 5 (lower is better)
Translates to: CWVPFKRSFLTPCSA*FFGHSERAAGRPGP
Trigger: AGGGCCCGGCCGACCCGCGGCCCGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683918.1
CDS-3UTR CAA 90 bp GAAATCCTGACATCTGTGCGCAGCGGCTCGCCGCACACCTGGACGGCACCTCCTCCACATCGTCCTCTGTaGGGTCCCGTTCAAGCGCTC +
Preference number: 5 (lower is better)
Translates to: EILTSVRSGSPHTWTAPPPHRPL*GPVQAL
Trigger: GAGCGCTTGAACGGGACCCAACAGAGGACGATGTGG...AGGAGGTGCCGTCCAGGTGTGCGGCGAGCCGCTGCGCACAGATGTCAGGATTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCCACATCGTCCTCTGTaGGGTCCCGTTCAAGCGCTC +
Preference number: 5 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHPHRPL*GPVQAL
Trigger: GAGCGCTTGAACGGGACCCAACAGAGGACGATGTGG...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATCCACATCGTCCTCTGTaGGGTCCCGTTCAAGCGCTC +
Preference number: 5 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDPHRPL*GPVQAL
Trigger: GAGCGCTTGAACGGGACCCAACAGAGGACGATGTGG...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATTCAGCAATCCTTGGGTaGGACCTGCTCCCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDSAILG*DLLPAQ
Trigger: CTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGA...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTGGCGGTGGCTTCCTTTaGTATTTGACTCTGCCGCAA +
Preference number: 5 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGGGGFL*YLTLPQ
Trigger: TTGCGGCAGAGTCAAATACAAAAGGAAGCCACCGCC...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGCGGTGGCTTCCTTTaGTATTTGACTCTGCCGCAA +
Preference number: 5 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQGGGFL*YLTLPQ
Trigger: TTGCGGCAGAGTCAAATACAAAAGGAAGCCACCGCC...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp AGGGCTGCCTCGGCCATCCCTGCATCTGTCAGTCAGTCACGGGGGCGGGCCGGCCCCTGTGCTGGAATGTaGCCTAATGCTGTGGATTTG +
Preference number: 5 (lower is better)
Translates to: RAASAIPASVSQSRGRAGPCAGM*PNAVDL
Trigger: CAAATCCACAGCATTAGGCAACATTCCAGCACAGGG...GCCGGCCCGCCCCCGTGACTGACTGACAGATGCAGGGATGGCCGAGGCAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CGGGACAGCACAGTGGCGGCCGACATCCTGCCTGCTTGTGTCTCCAGTAGGTTCACGAGCAGGCTGGTGTaGGGAACATTGGCGACGCGG +
Preference number: 5 (lower is better)
Translates to: RDSTVAADILPACVSSRFTSRLV*GTLATR
Trigger: CCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGT...GAACCTACTGGAGACACAAGCAGGCAGGATGTCGGCCGCCACTGTGCTGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CAA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGCGGCCGCCTGTCGGCTaGCTGGAGACTCGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: AHLPGARPGWLKIASIEMRPPVG*LETRQR
Trigger: CCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCG...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp GGGGGAGGAGGGAGCCCGTCTTCCACGGGGCCTGGCTCGCACTATTTCCACGTGGCTGAGTTCTGCAGTTaGGGTGACGGACTGAACGTG +
Preference number: 5 (lower is better)
Translates to: GGGGSPSSTGPGSHYFHVAEFCS*GDGLNV
Trigger: CACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGC...CACGTGGAAATAGTGCGAGCCAGGCCCCGTGGAAGACGGGCTCCCTCCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp AGGTACTCTCGCTGGCGGTCCACGGCCGAGGAGCTCTTGTGCACCGCCAGGCTTCCAAGAATTGAGGTCTaGCCTCTGCAGCATGGCCGG +
Preference number: 5 (lower is better)
Translates to: RYSRWRSTAEELLCTARLPRIEV*PLQHGR
Trigger: CCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGG...AAGCCTGGCGGTGCACAAGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCAGGGCTGGAGCTCAATaGGAACCAGTGGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPRAGAQ*EPVEPR
Trigger: TCTGGGCTCCACTGGTTCCAATTGAGCTCCAGCCCT...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGCGTTTCCAGGTGCTGTaGGAGGTTCATGTCACAGGT +
Preference number: 5 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQRFQVL*EVHVTG
Trigger: ACCTGTGACATGAACCTCCAACAGCACCTGGAAACG...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAGGGGCTGCCACTGGGTaGCCTCATTCCCTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEGAATG*PHSLCP
Trigger: AGGGCAGAGGGAATGAGGCAACCCAGTGGCAGCCCC...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS CCA 90 bp CATGGCCATGGCCGTGGCCTCTGTTGCCCTCAGCAATCCTTGGGTTaGACCTGCTCCCGGCTCAGGTGTCACCCTCATGTCTCCGTCAGT +
Preference number: 5 (lower is better)
Translates to: HGHGRGLCCPQQSLG*TCSRLRCHPHVSVS
Trigger: ACTGACGGAGACATGAGGGTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCATGGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS-3UTR CAA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCATGGCCGTGGCCTCTGTaGCCCTCAGCAATCCTTGGG +
Preference number: 5 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPWPWPL*PSAILG
Trigger: CCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCA...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAATGGCCGTGGCCTCTGTaGCCCTCAGCAATCCTTGGG +
Preference number: 5 (lower is better)
Translates to: KPAQPARDTERLLPFLTEWPWPL*PSAILG
Trigger: CCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCA...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCCTGGTGTTGGGAACATaGGCGACGCGGATGAGGCCC +
Preference number: 5 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPLVLGT*ATRMRP
Trigger: GGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAG...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACTGGTGTTGGGAACATaGGCGACGCGGATGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRALVLGT*ATRMRP
Trigger: GGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAG...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCAGTCTTCTCCAGCTGTTaGCGCAGCGCCAGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRAVFSSC*RSASLA
Trigger: CGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGAC...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GGCCTTGCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGAGCGCCTTCTTCTGGTaGGTTGTCATGCAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: GLAHAHHSVQGEPPVCRQSAFFW*VVMQFS
Trigger: TGAGAACTGCATGACAACCAACCAGAAGAAGGCGCT...CTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGCAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTCTGGTGTGCTCCACCTaGAGCGCCTTCTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PSHWHEAGPACKRHGTASLVCST*SAFFWL
Trigger: CAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAG...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAGCTGAGTTCTGCAGTTaGGGTGACGGACTGAACGTG +
Preference number: 5 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRAEFCS*GDGLNV
Trigger: CACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGC...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACACAGCATGGCCGGTGCTaGCTCTTGGGGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTQHGRC*LLGRAR
Trigger: CCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTG...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp CCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATCCAAGAATTGAGGTCTaGCCTCTGCAGCATGGCCGG +
Preference number: 5 (lower is better)
Translates to: PSDDPRLPMRRHQPPSPDPRIEV*PLQHGR
Trigger: CCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGG...ATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GCCCATGCGCATCACAGTGTCCAGGGTGAGCCGCCCGTGTGCCGGCAGGGGCTGAATACAACAACCCGCTaGGGGCTTATCGTAGAGGTT +
Preference number: 5 (lower is better)
Translates to: AHAHHSVQGEPPVCRQGLNTTTR*GLIVEV
Trigger: AACCTCTACGATAAGCCCCAAGCGGGTTGTTGTATT...CAGCCCCTGCCGGCACACGGGCGGCTCACCCTGGACACTGTGATGCGCATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCACATTCTGACGGCTaGCAGGAACCTGATCCTGGT +
Preference number: 5 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRPHSDG*QEPDPG
Trigger: ACCAGGATCAGGTTCCTGCAAGCCGTCAGAATGTGG...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS GCA 90 bp CTGAAGAGGTCTGGAGTGATGGCTTGCCAGCAGGAATGTTCTGAGTaGCCCGAACAAGCGGGGGAGGGGTGGTCACGGTGCTCCCAACAG +
Preference number: 5 (lower is better)
Translates to: LKRSGVMACQQECSE*PEQAGEGWSRCSQQ
Trigger: CTGTTGGGAGCACCGTGACCACCCCTCCCCCGCTTGTTCGGGGCACTCAGAACATTCCTGCTGGCAAGCCATCACTCCAGACCTCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000683918.1
CDS-3UTR CAA 90 bp GGGCCGGCCGTCCCTGCCAGGGGCTGTGGCACCATGAGCCGCCCACCCTCCAGGTCAACAACACGAGTTTaGCTTCTTCTAACCTCAATT +
Preference number: 5 (lower is better)
Translates to: GPAVPARGCGTMSRPPSRSTTRV*LLLTSI
Trigger: AATTGAGGTTAGAAGAAGCAAAACTCGTGTTGTTGA...CCTGGAGGGTGGGCGGCTCATGGTGCCACAGCCCCTGGCAGGGACGGCCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCAGTGGGCTGTGGGATGTaGACGAGCAGGCTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRAVGCGM*TSRLVL
Trigger: CAACACCAGCCTGCTCGTCAACATCCCACAGCCCAC...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTTCTGGTTGGTaGTCATGCAGTTCTCACACA +
Preference number: 5 (lower is better)
Translates to: LLGRARCLPEPAEGGAVGPSSGW*SCSSHT
Trigger: TGTGTGAGAACTGCATGACAACCAACCAGAAGAAGG...ACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCGCCTTCTTCTGGTaGGTTGTCATGCAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPSAFFW*VVMQFS
Trigger: TGAGAACTGCATGACAACCAACCAGAAGAAGGCGCT...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CCCTCGCACTGGCATGAAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCTGAGTTCTGCAGTTaGGGTGACGGACTGAACGTG +
Preference number: 5 (lower is better)
Translates to: PSHWHEAGPACKRHGTASAEFCS*GDGLNV
Trigger: CACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGC...AGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTTCATGCCAGTGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCAGGGGCCAGGTGGGGGAGGATCACAGTATGTACGTaGTCCCTGATGGAATGCTCC +
Preference number: 5 (lower is better)
Translates to: PAEGGAVGPSRPGARWGRITVCT*SLMECS
Trigger: GGAGCATTCCATCAGGGACAACGTACATACTGTGAT...CCTCCCCCACCTGGCCCCTGGTCTAGAAGGACCCACTGCACCACCCTCCGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGTTAAGAGGGTGTGCTTaGCTGTGGGTAGAACACCCT +
Preference number: 5 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPLRGCA*LWVEHP
Trigger: AGGGTGTTCTACCCACAGCAAAGCACACCCTCTTAA...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACAGGTTCCAAGGGCACTaGGCCATTCCAAACCCTACC +
Preference number: 5 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHRFQGH*AIPNPT
Trigger: GGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCT...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTTCTGCCCTGAAGCTTTaGCTTCACCGAGGTCCGTGG +
Preference number: 5 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPSALKL*LHRGPW
Trigger: CCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGA...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS GCA 90 bp TGTTGGGTCCCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCGAAGTTGCTCGGCGCCCTCGCTGACGGC +
Preference number: 5 (lower is better)
Translates to: CWVPFKRSFLTPCSA*FFGHSKLLGALADG
Trigger: GCCGTCAGCGAGGGCGCCGAGCAACTTCGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS-3UTR CAA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGCTGGTGTTGGGAACATaGGCGACGCGGATGAGGCCC +
Preference number: 5 (lower is better)
Translates to: AHLPGARPGWLKIASIEMLVLGT*ATRMRP
Trigger: GGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAG...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAAGCGCCTTCTTCTGGTaGGTTGTCATGCAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRSAFFW*VVMQFS
Trigger: TGAGAACTGCATGACAACCAACCAGAAGAAGGCGCT...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GCCCTTGCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGCTTTGCAGCCAAGAATaGAGGTCTTGCCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ALAGAHGSLRMSAGPADQLCSQE*RSCLCS
Trigger: GCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAG...CTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGCAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GCCGGCGCTCACGGTTCTCTCAGAATGTCTGCCGGTCCTGCTGACCAGGGCTGTCTTTGCAGCCAAGAATaGAGGTCTTGCCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: AGAHGSLRMSAGPADQGCLCSQE*RSCLCS
Trigger: GCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAG...ACAGCCCTGGTCAGCAGGACCGGCAGACATTCTGAGAGAACCGTGAGCGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp AGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCAAGGGCTGGAGCTCAATaGGAACCAGTGGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: RIEVLPLQHGRCLLLGRARAGAQ*EPVEPR
Trigger: TCTGGGCTCCACTGGTTCCAATTGAGCTCCAGCCCT...TGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCTGCATAGAACTGAGGTaGGTTCGCTGGGGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: PVHAHLPGARPGWLKIASCIELR*VRWGGL
Trigger: AAGCCCTCCCCAGCGAACCAACCTCAGTTCTATGCA...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp TGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGAGCCAGATCACAGTATGTACGTaGTCCCTGATGGAATGCTCC +
Preference number: 5 (lower is better)
Translates to: CSMAGACSWGGHGVFPSQITVCT*SLMECS
Trigger: GGAGCATTCCATCAGGGACAACGTACATACTGTGAT...CTGGCTCGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCATCTGCCCTGAAGCTTTaGCTTCACCGAGGTCCGTGG +
Preference number: 5 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPSALKL*LHRGPW
Trigger: CCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGA...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGTCTTCCTTCAGCTGCTaGATCATCCTTTCTCGTTCT +
Preference number: 5 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPSSFSC*IILSRS
Trigger: AGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAGA...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CCTGTGCACGCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCGGCGGTGGCTTCCTTTaGTATTTGACTCTGCCGCAA +
Preference number: 5 (lower is better)
Translates to: PVHAHLPGARPGWLKIASGGGFL*YLTLPQ
Trigger: TTGCGGCAGAGTCAAATACAAAAGGAAGCCACCGCC...GGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGCGTGCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCACGAGCAGGCTGGTGTaGGGAACATTGGCGACGCGG +
Preference number: 5 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLTSRLV*GTLATR
Trigger: CCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGT...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGACCTTCTTCTGGTTGGTaGTCATGCAGTTCTCACACA +
Preference number: 5 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRPSSGW*SCSSHT
Trigger: TGTGTGAGAACTGCATGACAACCAACCAGAAGAAGG...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GCTTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCAGCGCCTTCTTCTGGTaGGTTGTCATGCAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: ACRNLILVGLSGPGPRQCSAFFW*VVMQFS
Trigger: TGAGAACTGCATGACAACCAACCAGAAGAAGGCGCT...GCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp CTCGGCAGAGGTGACCACAGAGGCCACACTAGTGGGGGTGGAGTTGGCCTGAGCAGCGCCTTCTTCTGGTaGGTTGTCATGCAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: LGRGDHRGHTSGGGVGLSSAFFW*VVMQFS
Trigger: TGAGAACTGCATGACAACCAACCAGAAGAAGGCGCT...GCTCAGGCCAACTCCACCCCCACTAGTGTGGCCTCTGTGGTCACCTCTGCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp AGCGATGATCCTCGTCTGCCTATGAGGCGGCACCAGCCCCCTAGCCCTGATGAAGCTGAGTTCTGCAGTTaGGGTGACGGACTGAACGTG +
Preference number: 5 (lower is better)
Translates to: SDDPRLPMRRHQPPSPDEAEFCS*GDGLNV
Trigger: CACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGC...TTCATCAGGGCTAGGGGGCTGGTGCCGCCTCATAGGCAGACGAGGATCATCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp AGAGGGGTGGTTCCTGGTCACCGTAGAGTTCCTGGGATGAGGTCAGGACGGCCACCACATTCTGACGGCTaGCAGGAACCTGATCCTGGT +
Preference number: 5 (lower is better)
Translates to: RGVVPGHRRVPGMRSGRPPHSDG*QEPDPG
Trigger: ACCAGGATCAGGTTCCTGCAAGCCGTCAGAATGTGG...TGGCCGTCCTGACCTCATCCCAGGAACTCTACGGTGACCAGGAACCACCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp CTGTGGGAGGTTCCAAGGGCACTTGGCCATTCCAAACCCTACCCCCAACCTCCCAGGTTCCAAGGGCACTaGGCCATTCCAAACCCTACC +
Preference number: 5 (lower is better)
Translates to: LWEVPRALGHSKPYPQPPRFQGH*AIPNPT
Trigger: GGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCT...GGGAGGTTGGGGGTAGGGTTTGGAATGGCCAAGTGCCCTTGGAACCTCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS TCA 90 bp CTCTCCACATCGTCCTCTGTTGGGTCCCGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCTTCTTCGGTCATTCTGGCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: LSTSSSVGSRSSARF*LRVRHASSVILASG
Trigger: CCCCGAAGCCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS TCA 90 bp CTCTCCACATCGTCCTCTGTTGGGTCCCGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCTTCTTCGGTCATTCTGAACGGGCCG +
Preference number: 5 (lower is better)
Translates to: LSTSSSVGSRSSARF*LRVRHASSVILNGP
Trigger: CGGCCCGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683918.1
CDS GCA 90 bp TGTTGGGTCCCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAACGAAGTTGCTCGGCGCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: CWVPFKRSFLTPCSA*FFGHSERSCSAPSL
Trigger: CAGCGAGGGCGCCGAGCAACTTCGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360315.7
ENST00000417582.6
CDS GCA 90 bp TTGATCATCCTTTCTCGTTCTTCAGGACTGCTTTTCTGTGTGAGGTaGGCATGTCCACGGGCCCATCGCCCACCAGCCCTTCGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: LIILSRSSGLLFCVR*ACPRAHRPPALRLC
Trigger: GCAGAGGCGAAGGGCTGGTGGGCGATGGGCCCGTGGACATGCGCACCTCACACAGAAAAGCAGTCCTGAAGAACGAGAAAGGATGATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CAA 90 bp TGCCTCATTCCCTCTGCCCTGAAGCTTTTGCTTCACCGAGGTCCGTGGAGTACATCAGCAATCCTTGGGTaGGACCTGCTCCCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: CLIPSALKLLLHRGPWSTSAILG*DLLPAQ
Trigger: CTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGA...TGTACTCCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGAGGGAATGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp GTCCCGCCTGTGCTGAGGGGCGTCTTCTTCCAGTTGGAGGTGGCGCTGCCCTTGTCTTCCTTCAGCTGCTaGATCATCCTTTCTCGTTCT +
Preference number: 5 (lower is better)
Translates to: VPPVLRGVFFQLEVALPLSSFSC*IILSRS
Trigger: AGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAGA...CAAGGGCAGCGCCACCTCCAACTGGAAGAAGACGCCCCTCAGCACAGGCGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CAA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTCCCTGTGCTGGAATGTaGCCTAATGCTGTGGATTTG +
Preference number: 5 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPPCAGM*PNAVDL
Trigger: CAAATCCACAGCATTAGGCAACATTCCAGCACAGGG...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCCTGGTGTTGGGAACATaGGCGACGCGGATGAGGCCC +
Preference number: 5 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCLVLGT*ATRMRP
Trigger: GGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAG...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCACGGCCGCCTGTCGGCTaGCTGGAGACTCGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSRPPVG*LETRQR
Trigger: CCTCTGCCGAGTCTCCAGCAAGCCGACAGGCGGCCG...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTCTGGTGTGCTCCACCTaGAGCGCCTTCTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGLVCST*SAFFWL
Trigger: CAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAG...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACTTTGCAGCCAAGAATaGAGGTCTTGCCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: KPAQPARDTERLLPFLTELCSQE*RSCLCS
Trigger: GCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAG...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp GCTCACCTCCCAGGAGCAAGGCCAGGGTGGCTTAAGATTGCGTCCATCGAAATGTCTGCCCTGAAGCTTTaGCTTCACCGAGGTCCGTGG +
Preference number: 5 (lower is better)
Translates to: AHLPGARPGWLKIASIEMSALKL*LHRGPW
Trigger: CCACGGACCTCGGTGAAGCAAAAGCTTCAGGGCAGA...CATTTCGATGGACGCAATCTTAAGCCACCCTGGCCTTGCTCCTGGGAGGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS GCA 90 bp TGTTGGGTCCCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAACTGGCTTCGGGGTATGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: CWVPFKRSFLTPCSA*FFGHSELASGYGVL
Trigger: CAGCACCCCATACCCCGAAGCCAGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494516.6
CDS-3UTR CAA 90 bp TTGACGAGCAGGCTGGTGTTGGGAACATTGGCGACGCGGATGAGGCCCTGCTGGCCTTCTTCTGGTTGGTaGTCATGCAGTTCTCACACA +
Preference number: 5 (lower is better)
Translates to: LTSRLVLGTLATRMRPCWPSSGW*SCSSHT
Trigger: TGTGTGAGAACTGCATGACAACCAACCAGAAGAAGG...CCAGCAGGGCCTCATCCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CAA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTACTCACAAGGATGGGTaGACAGCCATCAGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGTHKDG*TAISPG
Trigger: TCCAGGGCTGATGGCTGTCAACCCATCCTTGTGAGT...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp TTGCAGGAACCTGATCCTGGTAGGGCTCTCGGGACCAGGACCCAGGCAGTGCCTAATACAACAACCCGCTaGGGGCTTATCGTAGAGGTT +
Preference number: 5 (lower is better)
Translates to: LQEPDPGRALGTRTQAVPNTTTR*GLIVEV
Trigger: AACCTCTACGATAAGCCCCAAGCGGGTTGTTGTATT...AGGCACTGCCTGGGTCCTGGTCCCGAGAGCCCTACCAGGATCAGGTTCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCCGTTTCCAGGTGCTGTaGGAGGTTCATGTCACAGGT +
Preference number: 5 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLRFQVL*EVHVTG
Trigger: ACCTGTGACATGAACCTCCAACAGCACCTGGAAACG...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp CGGGCACGGTGTCTTCCCGAGCCAGCGGAGGGTGGTGCAGTGGGTCCTTCTAGAACATCAAAAGGCTACTaGAGACAATGTGCTGACCAA +
Preference number: 5 (lower is better)
Translates to: RARCLPEPAEGGAVGPSRTSKGY*RQCADQ
Trigger: TTGGTCAGCACATTGTCTCAAGTAGCCTTTTGATGT...TCTAGAAGGACCCACTGCACCACCCTCCGCTGGCTCGGGAAGACACCGTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS TCA 90 bp CTCTCCACATCGTCCTCTGTTGGGTCCCGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCTTCTTCGGTCATTCGAAGTTGCTCG +
Preference number: 5 (lower is better)
Translates to: LSTSSSVGSRSSARF*LRVRHASSVIRSCS
Trigger: CGAGCAACTTCGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS CCA 90 bp AGGCTCTGTGACAGCAGGTACAACACCTTGTCCATGTCCCTGAAGTaGCCCCACTTCTGCAAGAGTGTCAGTCACAGAGCAGGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: RLCDSRYNTLSMSLK*PHFCKSVSHRAGVL
Trigger: CAGCACACCTGCTCTGTGACTGACACTCTTGCAGAAGTGGGGCCACTTCAGGGACATGGACAAGGTGTTGTACCTGCTGTCACAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429242.7
CDS CCA 90 bp AAGGGAGGTCTCCTCACTCCCTGCTCACCTCTGGGGAGTGGGGACTaGGGATCACATTTAACCCTTTGGTTGCCAGTGAGGTACACTTTG +
Preference number: 5 (lower is better)
Translates to: KGGLLTPCSPLGSGD*GSHLTLWLPVRYTL
Trigger: CAAAGTGTACCTCACTGGCAACCAAAGGGTTAAATGTGATCCCCAGTCCCCACTCCCCAGAGGTGAGCAGGGAGTGAGGAGACCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444839.1
CDS-3UTR CAA 90 bp TGCCTCTGCAGCATGGCCGGTGCTTGCTCTTGGGGCGGGCACGGTGTCTTCCCGTCAACAACACGAGTTTaGCTTCTTCTAACCTCAATT +
Preference number: 5 (lower is better)
Translates to: CLCSMAGACSWGGHGVFPSTTRV*LLLTSI
Trigger: AATTGAGGTTAGAAGAAGCAAAACTCGTGTTGTTGA...CGGGAAGACACCGTGCCCGCCCCAAGAGCAAGCACCGGCCATGCTGCAGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp AGCCCACGGGAAAGGTCCCCCAGCGATGATCCTCGTCTGCCTATGAGGCGGCACGGCTTCCTTTTGTATTaGACTCTGCCGCAACTTTTT +
Preference number: 5 (lower is better)
Translates to: SPRERSPSDDPRLPMRRHGFLLY*TLPQLF
Trigger: AAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGCC...GTGCCGCCTCATAGGCAGACGAGGATCATCGCTGGGGGACCTTTCCCGTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp TTACTCCAGTCGCGGGCCTCTCCTGAGCGGAACGCCAACTTACGCCGGGGTTTTCCTTCTTCTGGTTGGTaGTCATGCAGTTCTCACACA +
Preference number: 5 (lower is better)
Translates to: LLQSRASPERNANLRRGFPSSGW*SCSSHT
Trigger: TGTGTGAGAACTGCATGACAACCAACCAGAAGAAGG...AAAACCCCGGCGTAAGTTGGCGTTCCGCTCAGGAGAGGCCCGCGACTGGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS-3UTR CAA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCGCTGAGTTCTGCAGTTaGGGTGACGGACTGAACGTG +
Preference number: 5 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLAEFCS*GDGLNV
Trigger: CACGTTCAGTCCGTCACCCAAACTGCAGAACTCAGC...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCCCAAGAATTGAGGTCTaGCCTCTGCAGCATGGCCGG +
Preference number: 5 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCPRIEV*PLQHGR
Trigger: CCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGG...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
ENST00000609040.5
CDS-3UTR CAA 90 bp CCCCCTCCAGCTTTCTGCTCAGGGCTGCTGCCGACCGGATCCTCTCCTTCTCCCGAGACAGGTATTTATTaGCCAGGCACACAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: PPPAFCSGLLPTGSSPSPETGIY*PGTQKN
Trigger: ATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCTC...GGGAGAAGGAGAGGATCCGGTCGGCAGCAGCCCTGAGCAGAAAGCTGGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCACTCACAAGGATGGGTaGACAGCCATCAGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLTHKDG*TAISPG
Trigger: TCCAGGGCTGATGGCTGTCAACCCATCCTTGTGAGT...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS TCA 90 bp CTCTCCACATCGTCCTCTGTTGGGTCCCGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCTTCTTCGGTCATTCTGAACTCACCA +
Preference number: 5 (lower is better)
Translates to: LSTSSSVGSRSSARF*LRVRHASSVILNSP
Trigger: TGGTGAGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358713.7
CDS TCA 90 bp CTCTCCACATCGTCCTCTGTTGGGTCCCGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCTTCTTCGGTCATTCTGAACTGGCTT +
Preference number: 5 (lower is better)
Translates to: LSTSSSVGSRSSARF*LRVRHASSVILNWL
Trigger: AAGCCAGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494516.6
CDS GCA 90 bp TGTTGGGTCCCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAACTCACCAGAGCCCTGGCAACAATC +
Preference number: 5 (lower is better)
Translates to: CWVPFKRSFLTPCSA*FFGHSELTRALATI
Trigger: GATTGTTGCCAGGGCTCTGGTGAGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358713.7
CDS-3UTR CAA 90 bp AAGCCGGCCCAGCCTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAATCTTCCTTCAGCTGCTaGATCATCCTTTCTCGTTCT +
Preference number: 5 (lower is better)
Translates to: KPAQPARDTERLLPFLTESSFSC*IILSRS
Trigger: AGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAGA...TTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAGGCTGGGCCGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCAACGAGCAGGCTGGTGTaGGGAACATTGGCGACGCGG +
Preference number: 5 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSTSRLV*GTLATR
Trigger: CCGCGTCGCCAATGTTCCCAACACCAGCCTGCTCGT...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCATCACAGTATGTACGTaGTCCCTGATGGAATGCTCC +
Preference number: 5 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLITVCT*SLMECS
Trigger: GGAGCATTCCATCAGGGACAACGTACATACTGTGAT...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCGACAGTTACAATCAGTaGGGCTGGGGGCTCCCACAT +
Preference number: 5 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCDSYNQ*GWGLPH
Trigger: ATGTGGGAGCCCCCAGCCCAACTGATTGTAACTGTC...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS TCA 90 bp CTCTCCACATCGTCCTCTGTTGGGTCCCGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCTTCTTCGGTCATTCTGAACGAAGTT +
Preference number: 5 (lower is better)
Translates to: LSTSSSVGSRSSARF*LRVRHASSVILNEV
Trigger: AACTTCGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360315.7
ENST00000417582.6
CDS TCA 90 bp ATAACAGGCTCTGTGACAGCAGGTACAACACCTTGTCCATGTCCCTaGAGTGGCCCCACTTCTGCAAGAGTGTCAGTCACAGAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: ITGSVTAGTTPCPCP*SGPTSARVSVTEQV
Trigger: CACCTGCTCTGTGACTGACACTCTTGCAGAAGTGGGGCCACTTCAGGGACATGGACAAGGTGTTGTACCTGCTGTCACAGAGCCTGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429242.7
CDS GCA 90 bp AGCAGGTACAACACCTTGTCCATGTCCCTGAAGTGGCCCCACTTCTaGAAGAGTGTCAGTCACAGAGCAGGTGTGCTGCACATACTGGAT +
Preference number: 5 (lower is better)
Translates to: SRYNTLSMSLKWPHF*KSVSHRAGVLHILD
Trigger: ATCCAGTATGTGCAGCACACCTGCTCTGTGACTGACACTCTTGCAGAAGTGGGGCCACTTCAGGGACATGGACAAGGTGTTGTACCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429242.7
CDS GCA 90 bp TGTTGGGTCCCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAACTTCAATCCCCAAGCAATGCACGG +
Preference number: 5 (lower is better)
Translates to: CWVPFKRSFLTPCSA*FFGHSELQSPSNAR
Trigger: CCGTGCATTGCTTGGGGATTGAAGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432704.5
CDS-3UTR CAA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCTGGTGTGCTCCACCTaGAGCGCCTTCTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKLVCST*SAFFWL
Trigger: CAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp ACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTTGCTCTTAAGAGGGTGTGCTTaGCTGTGGGTAGAACACCCT +
Preference number: 5 (lower is better)
Translates to: TLQPRIEVLPLQHGRCLLLRGCA*LWVEHP
Trigger: AGGGTGTTCTACCCACAGCAAAGCACACCCTCTTAA...GAGCAAGCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS TCA 90 bp CTCTCCACATCGTCCTCTGTTGGGTCCCGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCTTCTTCGGTCATTCTGAACTTCAAT +
Preference number: 5 (lower is better)
Translates to: LSTSSSVGSRSSARF*LRVRHASSVILNFN
Trigger: ATTGAAGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432704.5
CDS TCA 90 bp CTCTCCACATCGTCCTCTGTTGGGTCCCGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCTTCTTCGGTCATTCTTTGGGATTTT +
Preference number: 5 (lower is better)
Translates to: LSTSSSVGSRSSARF*LRVRHASSVILWDF
Trigger: AAAATCCCAAAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444839.1
CDS GCA 90 bp TGTTGGGTCCCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAACAGATAACAGGCTCTGTGACAGCA +
Preference number: 5 (lower is better)
Translates to: CWVPFKRSFLTPCSA*FFGHSEQITGSVTA
Trigger: TGCTGTCACAGAGCCTGTTATCTGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429242.7
CDS-3UTR CAA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCCCCTGTGCTGGAATGTaGCCTAATGCTGTGGATTTG +
Preference number: 5 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCPCAGM*PNAVDL
Trigger: CAAATCCACAGCATTAGGCAACATTCCAGCACAGGG...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATAGTGGGCTGTGGGATGTaGACGAGCAGGCTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIVGCGM*TSRLVL
Trigger: CAACACCAGCCTGCTCGTCAACATCCCACAGCCCAC...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS CCA 90 bp TCCTCTCTCCATTTTTATTTTCTTGCTCTCCACATCGTCCTCTGTTaGGTCCCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATGC +
Preference number: 5 (lower is better)
Translates to: SSLHFYFLALHIVLC*VPFKRSFLTPCSAC
Trigger: GCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAGCAAGAAAATAAAAATGGAGAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS-3UTR CAA 90 bp CCGACCCTCTCCCTTTCGAGGGGCAGCAGTCCATATGAACTCACAAGGATGGGTGGCTTCCTTTTGTATTaGACTCTGCCGCAACTTTTT +
Preference number: 5 (lower is better)
Translates to: PTLSLSRGSSPYELTRMGGFLLY*TLPQLF
Trigger: AAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGCC...ACCCATCCTTGTGAGTTCATATGGACTGCTGCCCCTCGAAAGGGAGAGGGTCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp CTGCAAGAGACACGGAACGGCTTCTGCCTTTCCTCACGGAACCAGTTTTTAAAGCTTTGCAGCCAAGAATaGAGGTCTTGCCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LQETRNGFCLSSRNQFLKLCSQE*RSCLCS
Trigger: GCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAG...CTTTAAAAACTGGTTCCGTGAGGAAAGGCAGAAGCCGTTCCGTGTCTCTTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp AGTATGTACGTTGTCCCTGATGGAATGCTCCCTGGGGACATGGGGCCGACCCTCGAGACAGGTATTTATTaGCCAGGCACACAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: SMYVVPDGMLPGDMGPTLETGIY*PGTQKN
Trigger: ATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCTC...GAGGGTCGGCCCCATGTCCCCAGGGAGCATTCCATCAGGGACAACGTACATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp GATGAAACTTTGCAGCCAAGAATTGAGGTCTTGCCTCTGCAGCATGGCCGGTGCTCTTCCTTCAGCTGCTaGATCATCCTTTCTCGTTCT +
Preference number: 5 (lower is better)
Translates to: DETLQPRIEVLPLQHGRCSSFSC*IILSRS
Trigger: AGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAGA...GCACCGGCCATGCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAGTTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCACTTTGCAGCCAAGAATaGAGGTCTTGCCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSLCSQE*RSCLCS
Trigger: GCTGCAGAGGCAAGACCTCAATTCTTGGCTGCAAAG...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATAGACAGTTACAATCAGTaGGGCTGGGGGCTCCCACAT +
Preference number: 5 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIDSYNQ*GWGLPH
Trigger: ATGTGGGAGCCCCCAGCCCAACTGATTGTAACTGTC...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTGTCTTCTCCAGCTGTTaGCGCAGCGCCAGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLVFSSC*RSASLA
Trigger: CGCCAAGCTGGCGCTGCGCAAACAGCTGGAGAAGAC...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTCTCGAGGGCTGCTCGTaGTCGGAGAGCACAATCACG +
Preference number: 5 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLLEGCS*SESTIT
Trigger: CGTGATTGTGCTCTCCGACAACGAGCAGCCCTCGAG...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp CCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCATACCTTCTTCTGGTTGGTaGTCATGCAGTTCTCACACA +
Preference number: 5 (lower is better)
Translates to: PNPTPREVLNNAFTWNIIPSSGW*SCSSHT
Trigger: TGTGTGAGAACTGCATGACAACCAACCAGAAGAAGG...TATGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS GCA 90 bp TGTTTAAATCTGAAGCCAACAATCCTCTCTCCATTTTTATTTTCTTaGTCTCCACATCGTCCTCTGTTGGGTCCCGTTCAAGCGCTCGTT +
Preference number: 5 (lower is better)
Translates to: CLNLKPTILSPFLFS*SPHRPLLGPVQALV
Trigger: AACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAGCAAGAAAATAAAAATGGAGAGAGGATTGTTGGCTTCAGATTTAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS-3UTR CAA 90 bp GTCCAAACCCCACACCCAGAGAGGTACTTAATAATGCCTTCACCTGGAACATCAGAGACAGGTATTTATTaGCCAGGCACACAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: VQTPHPERYLIMPSPGTSETGIY*PGTQKN
Trigger: ATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCTC...TGATGTTCCAGGTGAAGGCATTATTAAGTACCTCTCTGGGTGTGGGGTTTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS-3UTR CAA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTTTAAGAGGGTGTGCTTaGCTGTGGGTAGAACACCCT +
Preference number: 5 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLLRGCA*LWVEHP
Trigger: AGGGTGTTCTACCCACAGCAAAGCACACCCTCTTAA...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
CDS GCA 90 bp AACAACACGAGTTTTGCTTCTTCTAACCTCAATTCTTCCTTCAGCTaGTTGATCATCCTTTCTCGTTCTTCAGGACTGCTTTTCATGAGG +
Preference number: 5 (lower is better)
Translates to: NNTSFASSNLNSSFS*LIILSRSSGLLFMR
Trigger: CCTCATGAAAAGCAGTCCTGAAGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAGAATTGAGGTTAGAAGAAGCAAAACTCGTGTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000683918.1
CDS GCA 90 bp AACAACACGAGTTTTGCTTCTTCTAACCTCAATTCTTCCTTCAGCTaGTTGATCATCCTTTCTCGTTCTTCAGGACTGCTTTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: NNTSFASSNLNSSFS*LIILSRSSGLLFCV
Trigger: CACACAGAAAAGCAGTCCTGAAGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAGAATTGAGGTTAGAAGAAGCAAAACTCGTGTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CAA 90 bp TTTGACTCTGCCGCAACTTTTTCAACAACACGAGTTTTGCTTCTTCTAACCTCAGGCTTCCTTTTGTATTaGACTCTGCCGCAACTTTTT +
Preference number: 5 (lower is better)
Translates to: FDSAATFSTTRVLLLLTSGFLLY*TLPQLF
Trigger: AAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGCC...TGAGGTTAGAAGAAGCAAAACTCGTGTTGTTGAAAAAGTTGCGGCAGAGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS-3UTR CAA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTGGCTTCCTTTTGTATTaGACTCTGCCGCAACTTTTT +
Preference number: 5 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLGFLLY*TLPQLF
Trigger: AAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGCC...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS-3UTR CAA 90 bp AGACAGGTATTTATTTGCCAGGCACACAGAAAAATGCGAGGAATAGAAATGCTTTCAACAACACGAGTTTaGCTTCTTCTAACCTCAATT +
Preference number: 5 (lower is better)
Translates to: RQVFICQAHRKMRGIEMLSTTRV*LLLTSI
Trigger: AATTGAGGTTAGAAGAAGCAAAACTCGTGTTGTTGA...AAGCATTTCTATTCCTCGCATTTTTCTGTGTGCCTGGCAAATAAATACCTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000418032.3
CDS CAA 90 bp GCTGACGGCGGCCGACGGCCTCGGGCGGCGCAGTCCGGTCAGGTCTaGTGGCGTCCCGCGGAGGCGACTCCCTCAGGTGGCGCCCGCGGC +
Preference number: 6 (lower is better)
Translates to: ADGGRRPRAAQSGQV*WRPAEATPSGGARG
Trigger: GCCGCGGGCGCCACCTGAGGGAGTCGCCTCCGCGGGACGCCACAAGACCTGACCGGACTGCGCCGCCCGAGGCCGTCGGCCGCCGTCAGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360315.7
ENST00000417582.6
ENST00000494516.6
ENST00000609040.5
CDS CCA 72 bp CGACGGCCTCGGGCGGCGCAGTCCGGTCAGGTCTTGTaGCGTCCCGCGGAGGCGACTCCCTCAGGTGGCGCC +
Preference number: 6 (lower is better)
Translates to: RRPRAAQSGQVL*RPAEATPSGGA
Trigger: GGCGCCACCTGAGGGAGTCGCCTCCGCGGGACGCCACAAGACCTGACCGGACTGCGCCGCCCGAGGCCGTCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360315.7
ENST00000417582.6
ENST00000494516.6
ENST00000609040.5
CDS CAA 72 bp GGCCGACGGCCTCGGGCGGCGCAGTCCGGTCAGGTCTaGTGGCGTCCCGCGGAGGCGACTCCCTCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: GRRPRAAQSGQV*WRPAEATPSGG
Trigger: GCCACCTGAGGGAGTCGCCTCCGCGGGACGCCACAAGACCTGACCGGACTGCGCCGCCCGAGGCCGTCGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360315.7
ENST00000417582.6
ENST00000494516.6
ENST00000609040.5
CDS TCA 72 bp TCGGTCATTCTGAACGAAGTTGCTCGGCGCCCTCGCTaGCGGCGGCCGACGGCCTCGGGCGGCGCAGTCCGG +
Preference number: 6 (lower is better)
Translates to: SVILNEVARRPR*RRPTASGGAVR
Trigger: CCGGACTGCGCCGCCCGAGGCCGTCGGCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGTTCAGAATGACCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360315.7
ENST00000417582.6
CDS TCA 72 bp CTTCTTCGGTCATTCGAAGTTGCTCGGCGCCCTCGCTaGCGGCGGCCGACGGCCTCGGGCGGCGCAGTCCGG +
Preference number: 6 (lower is better)
Translates to: LLRSFEVARRPR*RRPTASGGAVR
Trigger: CCGGACTGCGCCGCCCGAGGCCGTCGGCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGAATGACCGAAGAAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS TCA 72 bp ACGCCTGCTGCCCACCTCGGACCAGGGGCGGGGGTATaGCACTGCCGGGCATCCGAGCTGAAGAGGTCTGGA +
Preference number: 6 (lower is better)
Translates to: TPAAHLGPGAGV*HCRASELKRSG
Trigger: TCCAGACCTCTTCAGCTCGGATGCCCGGCAGTGTCATACCCCCGCCCCTGGTCCGAGGTGGGCAGCAGGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000683918.1
CDS CAA 90 bp TCGTTTCTGACTCCGTGTTCGGCATGCTTCTTCGGTCATTCGAAGTaGCTCGGCGCCCTCGCTGACGGCGGCCGACGGCCTCGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: SFLTPCSACFFGHSK*LGALADGGRRPRAA
Trigger: CGCCGCCCGAGGCCGTCGGCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS GCA 72 bp CTCCGTGTTCGGCATGCTTCTTCGGTCATTCGAAGTTaGTCGGCGCCCTCGCTGACGGCGGCCGACGGCCTC +
Preference number: 6 (lower is better)
Translates to: LRVRHASSVIRS*SAPSLTAADGL
Trigger: GAGGCCGTCGGCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGAATGACCGAAGAAGCATGCCGAACACGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS CCA 72 bp GCCATGGCCGTGGCCTCTGTTGCCCTCAGCAATCCTTaGGTTGGACCTGCTCCCGGCTCAGGTGTCACCCTC +
Preference number: 6 (lower is better)
Translates to: AMAVASVALSNP*VGPAPGSGVTL
Trigger: GAGGGTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCATGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS CAA 72 bp GGCCATGGCCGTGGCCTCTGTTGCCCTCAGCAATCCTaGGGTTGGACCTGCTCCCGGCTCAGGTGTCACCCT +
Preference number: 6 (lower is better)
Translates to: GHGRGLCCPQQS*GWTCSRLRCHP
Trigger: AGGGTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCATGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS CAA 72 bp ACTCCGTGTTCGGCATGCTTCTTCGGTCATTCGAAGTaGCTCGGCGCCCTCGCTGACGGCGGCCGACGGCCT +
Preference number: 6 (lower is better)
Translates to: TPCSACFFGHSK*LGALADGGRRP
Trigger: AGGCCGTCGGCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGAATGACCGAAGAAGCATGCCGAACACGGAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS CAA 90 bp GTGACATCAAAAGGCTACTTGAGACAATGTGCTGACCAACCGAAGTaGCTCGGCGCCCTCGCTGACGGCGGCCGACGGCCTCGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: VTSKGYLRQCADQPK*LGALADGGRRPRAA
Trigger: CGCCGCCCGAGGCCGTCGGCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGGTTGGTCAGCACATTGTCTCAAGTAGCCTTTTGATGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494516.6
CDS GCA 72 bp TGTTCGGCATGCTTCTTCGGTCATTCTGAACGAAGTTaGTCGGCGCCCTCGCTGACGGCGGCCGACGGCCTC +
Preference number: 6 (lower is better)
Translates to: CSACFFGHSERS*SAPSLTAADGL
Trigger: GAGGCCGTCGGCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGTTCAGAATGACCGAAGAAGCATGCCGAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360315.7
ENST00000417582.6
CDS GCA 72 bp GGGGTCTCCTCTCGGACTTCATGTCACTGTGTGAGGTaGGCATGTCCACGGGCCCATCGCCCACCAGCCCTT +
Preference number: 6 (lower is better)
Translates to: GVSSRTSCHCVR*ACPRAHRPPAL
Trigger: AAGGGCTGGTGGGCGATGGGCCCGTGGACATGCGCACCTCACACAGTGACATGAAGTCCGAGAGGAGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000429242.7
ENST00000432704.5
ENST00000683918.1
CDS CCA 72 bp GGCCGTGGCCTCTGTTGCCCTCAGCAATCCTTGGGTTaGACCTGCTCCCGGCTCAGGTGTCACCCTCATGTC +
Preference number: 6 (lower is better)
Translates to: GRGLCCPQQSLG*TCSRLRCHPHV
Trigger: GACATGAGGGTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS CAA 90 bp CCATGGCCATGGCCGTGGCCTCTGTTGCCCTCAGCAATCCTTGGGTaGGACCTGCTCCCGGCTCAGGTGTCACCCTCATGTCTCCGTCAG +
Preference number: 6 (lower is better)
Translates to: PWPWPWPLLPSAILG*DLLPAQVSPSCLRQ
Trigger: CTGACGGAGACATGAGGGTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCATGGCCATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS CAA 90 bp TCTGCCCATGGCCATGGCCGTGGCCTCTGTTGCCCTCAGCAATCCTaGGGTTGGACCTGCTCCCGGCTCAGGTGTCACCCTCATGTCTCC +
Preference number: 6 (lower is better)
Translates to: SAHGHGRGLCCPQQS*GWTCSRLRCHPHVS
Trigger: GGAGACATGAGGGTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGAGGGCAACAGAGGCCACGGCCATGGCCATGGGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS GCA 72 bp GGCCTCTGTTGCCCTCAGCAATCCTTGGGTTGGACCTaGTCCCGGCTCAGGTGTCACCCTCATGTCTCCGTC +
Preference number: 6 (lower is better)
Translates to: GLCCPQQSLGWT*SRLRCHPHVSV
Trigger: GACGGAGACATGAGGGTGACACCTGAGCCGGGAGCAGGTCCAACCCAAGGATTGCTGAGGGCAACAGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS GCA 72 bp TCTGGAGTGATGGCTTGCCAGCAGGAATGTTCTGAGTaGCCCGAACAAGCGGGGGAGGGGTGGTCACGGTGC +
Preference number: 6 (lower is better)
Translates to: SGVMACQQECSE*PEQAGEGWSRC
Trigger: GCACCGTGACCACCCCTCCCCCGCTTGTTCGGGGCACTCAGAACATTCCTGCTGGCAAGCCATCACTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000683918.1
CDS CAA 72 bp AAAGGCTACTTGAGACAATGTGCTGACCAACCGAAGTaGCTCGGCGCCCTCGCTGACGGCGGCCGACGGCCT +
Preference number: 6 (lower is better)
Translates to: KGYLRQCADQPK*LGALADGGRRP
Trigger: AGGCCGTCGGCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGGTTGGTCAGCACATTGTCTCAAGTAGCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494516.6
CDS TCA 72 bp TCTGACTCCGTGTTCGGCATGCTTCTTCGGTCATTCTaGACGAAGTTGCTCGGCGCCCTCGCTGACGGCGGC +
Preference number: 6 (lower is better)
Translates to: SDSVFGMLLRSF*TKLLGALADGG
Trigger: GCCGCCGTCAGCGAGGGCGCCGAGCAACTTCGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360315.7
ENST00000417582.6
CDS GCA 72 bp ACCGTGGTCAGCCCATTCACTCTCGGGCTCGAGGGCTaGTCGTTGTCGGAGAGCACAATCACGTCAGGTGAG +
Preference number: 6 (lower is better)
Translates to: TVVSPFTLGLEG*SLSESTITSGE
Trigger: CTCACCTGACGTGATTGTGCTCTCCGACAACGAGCAGCCCTCGAGCCCGAGAGTGAATGGGCTGACCACGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000429242.7
ENST00000432704.5
ENST00000473184.1
ENST00000683918.1
CDS GCA 72 bp CCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAACGGGCCGCGGGTCGG +
Preference number: 6 (lower is better)
Translates to: PFKRSFLTPCSA*FFGHSERAAGR
Trigger: CCGACCCGCGGCCCGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683918.1
CDS GCA 72 bp CTTTCTCGTTCTTCAGGACTGCTTTTCTGTGTGAGGTaGGCATGTCCACGGGCCCATCGCCCACCAGCCCTT +
Preference number: 6 (lower is better)
Translates to: LSRSSGLLFCVR*ACPRAHRPPAL
Trigger: AAGGGCTGGTGGGCGATGGGCCCGTGGACATGCGCACCTCACACAGAAAAGCAGTCCTGAAGAACGAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS GCA 72 bp CCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCGAAGTTGCTCGGCGCCCTC +
Preference number: 6 (lower is better)
Translates to: PFKRSFLTPCSA*FFGHSKLLGAL
Trigger: GAGGGCGCCGAGCAACTTCGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS CCA 72 bp CTCCTCACTCCCTGCTCACCTCTGGGGAGTGGGGACTaGGGATCACATTTAACCCTTTGGTTGCCAGTGAGG +
Preference number: 6 (lower is better)
Translates to: LLTPCSPLGSGD*GSHLTLWLPVR
Trigger: CCTCACTGGCAACCAAAGGGTTAAATGTGATCCCCAGTCCCCACTCCCCAGAGGTGAGCAGGGAGTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444839.1
CDS GCA 72 bp ATGCTTCTTCGGTCATTCTGGCTTCGGGGTATGGGGTaGTGGTCCTACCAGTTGGCCATGGCCACAGTGACA +
Preference number: 6 (lower is better)
Translates to: MLLRSFWLRGMG*WSYQLAMATVT
Trigger: TGTCACTGTGGCCATGGCCAACTGGTAGGACCAGCACCCCATACCCCGAAGCCAGAATGACCGAAGAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS GCA 72 bp CCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGGCTTCGGGGTATGGGGT +
Preference number: 6 (lower is better)
Translates to: PFKRSFLTPCSA*FFGHSGFGVWG
Trigger: ACCCCATACCCCGAAGCCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS GCA 72 bp TCTTCGGTCATTCTGAACTGGCTTCGGGGTATGGGGTaGTGGTCCTACCAGTTGGCCATGGCCACAGTGACA +
Preference number: 6 (lower is better)
Translates to: SSVILNWLRGMG*WSYQLAMATVT
Trigger: TGTCACTGTGGCCATGGCCAACTGGTAGGACCAGCACCCCATACCCCGAAGCCAGTTCAGAATGACCGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494516.6
CDS CCA 72 bp CTTCTTCGGTCATTCTGGCTTCGGGGTATGGGGTGCTaGTCCTACCAGTTGGCCATGGCCACAGTGACATCA +
Preference number: 6 (lower is better)
Translates to: LLRSFWLRGMGC*SYQLAMATVTS
Trigger: TGATGTCACTGTGGCCATGGCCAACTGGTAGGACCAGCACCCCATACCCCGAAGCCAGAATGACCGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS CCA 72 bp TCGGTCATTCTGAACTGGCTTCGGGGTATGGGGTGCTaGTCCTACCAGTTGGCCATGGCCACAGTGACATCA +
Preference number: 6 (lower is better)
Translates to: SVILNWLRGMGC*SYQLAMATVTS
Trigger: TGATGTCACTGTGGCCATGGCCAACTGGTAGGACCAGCACCCCATACCCCGAAGCCAGTTCAGAATGACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494516.6
CDS CAA 90 bp TGGTCCTACCAGTTGGCCATGGCCACAGTGACATCAAAAGGCTACTaGAGACAATGTGCTGACCAACCGAAGTTGCTCGGCGCCCTCGCT +
Preference number: 6 (lower is better)
Translates to: WSYQLAMATVTSKGY*RQCADQPKLLGALA
Trigger: AGCGAGGGCGCCGAGCAACTTCGGTTGGTCAGCACATTGTCTCAAGTAGCCTTTTGATGTCACTGTGGCCATGGCCAACTGGTAGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494516.6
CDS TCA 72 bp TCGTCCTCTGTTGGGTCCCGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCTTCTTCGGTCATTCTG +
Preference number: 6 (lower is better)
Translates to: SSSVGSRSSARF*LRVRHASSVIL
Trigger: CAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000494516.6
ENST00000683918.1
CDS TCA 72 bp TCGTCCTCTGTTGGGTCCCGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCTTCTTCGGTCATTCGA +
Preference number: 6 (lower is better)
Translates to: SSSVGSRSSARF*LRVRHASSVIR
Trigger: TCGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609040.5
CDS GCA 72 bp CCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAACGAAGTTGCTCGGCG +
Preference number: 6 (lower is better)
Translates to: PFKRSFLTPCSA*FFGHSERSCSA
Trigger: CGCCGAGCAACTTCGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360315.7
ENST00000417582.6
CDS GCA 72 bp CCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAACTCACCAGAGCCCTG +
Preference number: 6 (lower is better)
Translates to: PFKRSFLTPCSA*FFGHSELTRAL
Trigger: CAGGGCTCTGGTGAGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358713.7
CDS CAA 90 bp TGGTCCTACCAGTTGGCCATGGCCACAGTGACATCAAAAGGCTACTaGAGACAATGTGCTGACCAACCTTCGAGGCTGGGTACGGTGGCT +
Preference number: 6 (lower is better)
Translates to: WSYQLAMATVTSKGY*RQCADQPSRLGTVA
Trigger: AGCCACCGTACCCAGCCTCGAAGGTTGGTCAGCACATTGTCTCAAGTAGCCTTTTGATGTCACTGTGGCCATGGCCAACTGGTAGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404158.5
CDS TCA 72 bp TCGTCCTCTGTTGGGTCCCGTTCAAGCGCTCGTTTCTaGCTCCGTGTTCGGCATGCTTCTTCGGTCATTCTT +
Preference number: 6 (lower is better)
Translates to: SSSVGSRSSARF*LRVRHASSVIL
Trigger: AAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444839.1
CDS GCA 72 bp CCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAACTGGCTTCGGGGTAT +
Preference number: 6 (lower is better)
Translates to: PFKRSFLTPCSA*FFGHSELASGY
Trigger: ATACCCCGAAGCCAGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494516.6
CDS CCA 72 bp GACAGCAGGTACAACACCTTGTCCATGTCCCTGAAGTaGCCCCACTTCTGCAAGAGTGTCAGTCACAGAGCA +
Preference number: 6 (lower is better)
Translates to: DSRYNTLSMSLK*PHFCKSVSHRA
Trigger: TGCTCTGTGACTGACACTCTTGCAGAAGTGGGGCCACTTCAGGGACATGGACAAGGTGTTGTACCTGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429242.7
CDS CAA 90 bp GACTGGGGATCACATTTAACCCTTTGGTTGCCAGTGAGGTACACTTaGAGTAGAGTGAGGCCTGGCCCATCAACGTGCCACTGCCCTGTA +
Preference number: 6 (lower is better)
Translates to: DWGSHLTLWLPVRYT*SRVRPGPSTCHCPV
Trigger: TACAGGGCAGTGGCACGTTGATGGGCCAGGCCTCACTCTACTCAAAGTGTACCTCACTGGCAACCAAAGGGTTAAATGTGATCCCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444839.1
CDS GCA 72 bp CCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAACTTCAATCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: PFKRSFLTPCSA*FFGHSELQSPS
Trigger: GCTTGGGGATTGAAGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432704.5
CDS CAA 72 bp ACAGATAACAGGCTCTGTGACAGCAGGTACAACACCTaGTCCATGTCCCTGAAGTGGCCCCACTTCTGCAAG +
Preference number: 6 (lower is better)
Translates to: TDNRLCDSRYNT*SMSLKWPHFCK
Trigger: CTTGCAGAAGTGGGGCCACTTCAGGGACATGGACAAGGTGTTGTACCTGCTGTCACAGAGCCTGTTATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429242.7
CDS CAA 72 bp GGGAGTGGGGACTGGGGATCACATTTAACCCTTTGGTaGCCAGTGAGGTACACTTTGAGTAGAGTGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GSGDWGSHLTLW*PVRYTLSRVRP
Trigger: AGGCCTCACTCTACTCAAAGTGTACCTCACTGGCAACCAAAGGGTTAAATGTGATCCCCAGTCCCCACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444839.1
CDS GCA 72 bp ATTCTGAACTCACCAGAGCCCTGGCAACAATCTCCGTaGCACTCAGGAGCTTCATCTCTCACTGCAACTCAA +
Preference number: 6 (lower is better)
Translates to: ILNSPEPWQQSP*HSGASSLTATQ
Trigger: TTGAGTTGCAGTGAGAGATGAAGCTCCTGAGTGGCACGGAGATTGTTGCCAGGGCTCTGGTGAGTTCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358713.7
CDS GCA 72 bp CCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTGAACAGATAACAGGCTCT +
Preference number: 6 (lower is better)
Translates to: PFKRSFLTPCSA*FFGHSEQITGS
Trigger: AGAGCCTGTTATCTGTTCAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429242.7
CDS GCA 72 bp CCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATaGTTCTTCGGTCATTCTTTGGGATTTTCAGCACCT +
Preference number: 6 (lower is better)
Translates to: PFKRSFLTPCSA*FFGHSLGFSAP
Trigger: AGGTGCTGAAAATCCCAAAGAATGACCGAAGAAGCATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444839.1
CDS CCA 72 bp TCTCGGACTTCATGTCACTTTCAGTTGCAGGACCCCTaGAGAAGAGCCGCATTTTTACTGAGCAACGTGCTC +
Preference number: 6 (lower is better)
Translates to: SRTSCHFQLQDP*RRAAFLLSNVL
Trigger: GAGCACGTTGCTCAGTAAAAATGCGGCTCTTCTCCAGGGGTCCTGCAACTGAAAGTGACATGAAGTCCGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473184.1
CDS CAA 72 bp TCACATTTAACCCTTTGGTTGCCAGTGAGGTACACTTaGAGTAGAGTGAGGCCTGGCCCATCAACGTGCCAC +
Preference number: 6 (lower is better)
Translates to: SHLTLWLPVRYT*SRVRPGPSTCH
Trigger: GTGGCACGTTGATGGGCCAGGCCTCACTCTACTCAAAGTGTACCTCACTGGCAACCAAAGGGTTAAATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444839.1
CDS CAA 90 bp ATCCTCTCTCCATTTTTATTTTCTTGCTCTCCACATCGTCCTCTGTaGGGTCCCGTTCAAGCGCTCGTTTCTGACTCCGTGTTCGGCATG +
Preference number: 6 (lower is better)
Translates to: ILSPFLFSCSPHRPL*GPVQALVSDSVFGM
Trigger: CATGCCGAACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAGCAAGAAAATAAAAATGGAGAGAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS CAA 72 bp CCATTTTTATTTTCTTGCTCTCCACATCGTCCTCTGTaGGGTCCCGTTCAAGCGCTCGTTTCTGACTCCGTG +
Preference number: 6 (lower is better)
Translates to: PFLFSCSPHRPL*GPVQALVSDSV
Trigger: CACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAGCAAGAAAATAAAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS TCA 72 bp CCTGTGGGCTTCTGGGCGGTGGCTTCCTTTTGTATTTaGCTCTGCCGCAACTTTTTCAACAACACGAGTTTT +
Preference number: 6 (lower is better)
Translates to: PVGFWAVASFCI*LCRNFFNNTSF
Trigger: AAAACTCGTGTTGTTGAAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGCCACCGCCCAGAAGCCCACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000683918.1
CDS CCA 72 bp CATTTTTATTTTCTTGCTCTCCACATCGTCCTCTGTTaGGTCCCGTTCAAGCGCTCGTTTCTGACTCCGTGT +
Preference number: 6 (lower is better)
Translates to: HFYFLALHIVLC*VPFKRSFLTPC
Trigger: ACACGGAGTCAGAAACGAGCGCTTGAACGGGACCCAACAGAGGACGATGTGGAGAGCAAGAAAATAAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000429242.7
ENST00000432704.5
ENST00000444839.1
ENST00000494516.6
ENST00000609040.5
ENST00000683918.1
CDS CCA 72 bp CAAGCAATGCACGGGAACAGAGACCTCAGATGTTCCTaGACACTGTTTCTCCCTAAATCCCCTAAAGATTGC +
Preference number: 6 (lower is better)
Translates to: QAMHGNRDLRCS*TLFLPKSPKDC
Trigger: GCAATCTTTAGGGGATTTAGGGAGAAACAGTGTCCAGGAACATCTGAGGTCTCTGTTCCCGTGCATTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432704.5
CDS CAA 72 bp ACCTGTGGGCTTCTGGGCGGTGGCTTCCTTTTGTATTaGACTCTGCCGCAACTTTTTCAACAACACGAGTTT +
Preference number: 6 (lower is better)
Translates to: TCGLLGGGFLLY*TLPQLFQQHEF
Trigger: AAACTCGTGTTGTTGAAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGCCACCGCCCAGAAGCCCACAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000683918.1
CDS CAA 72 bp AACAGAACCTGTGGGCTTCTGGGCGGTGGCTTCCTTTaGTATTTGACTCTGCCGCAACTTTTTCAACAACAC +
Preference number: 6 (lower is better)
Translates to: NRTCGLLGGGFL*YLTLPQLFQQH
Trigger: GTGTTGTTGAAAAAGTTGCGGCAGAGTCAAATACAAAAGGAAGCCACCGCCCAGAAGCCCACAGGTTCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000683918.1
CDS GCA 72 bp ACAATCTCCGTGCCACTCAGGAGCTTCATCTCTCACTaGAACTCAATGTTAAGCTCTCAATGGCAGAAACTT +
Preference number: 6 (lower is better)
Translates to: TISVPLRSFISH*NSMLSSQWQKL
Trigger: AAGTTTCTGCCATTGAGAGCTTAACATTGAGTTGCAGTGAGAGATGAAGCTCCTGAGTGGCACGGAGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358713.7
CDS CAA 90 bp AACACGAGTTTTGCTTCTTCTAACCTCAATTCTTCCTTCAGCTGCTaGATCATCCTTTCTCGTTCTTCAGGACTGCTTTTCATGAGGGCC +
Preference number: 6 (lower is better)
Translates to: NTSFASSNLNSSFSC*IILSRSSGLLFMRA
Trigger: GGCCCTCATGAAAAGCAGTCCTGAAGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAGAATTGAGGTTAGAAGAAGCAAAACTCGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000683918.1
CDS CAA 90 bp AACACGAGTTTTGCTTCTTCTAACCTCAATTCTTCCTTCAGCTGCTaGATCATCCTTTCTCGTTCTTCAGGACTGCTTTTCTGTGTGAGG +
Preference number: 6 (lower is better)
Translates to: NTSFASSNLNSSFSC*IILSRSSGLLFCVR
Trigger: CCTCACACAGAAAAGCAGTCCTGAAGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAGAATTGAGGTTAGAAGAAGCAAAACTCGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418032.3
CDS CAA 72 bp TTTGCTTCTTCTAACCTCAATTCTTCCTTCAGCTGCTaGATCATCCTTTCTCGTTCTTCAGGACTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: FASSNLNSSFSC*IILSRSSGLLF
Trigger: GAAAAGCAGTCCTGAAGAACGAGAAAGGATGATCAAGCAGCTGAAGGAAGAATTGAGGTTAGAAGAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358713.7
ENST00000360315.7
ENST00000404158.5
ENST00000417582.6
ENST00000418032.3
ENST00000683918.1