RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GATA4 (Homo sapiens)

Ensembl gene IDs: ENSG00000136574, ENSG00000285109

Ensembl transcript IDs: ENST00000335135.8, ENST00000526021.1, ENST00000526716.5, ENST00000526974.1, ENST00000528712.5, ENST00000532059.6, ENST00000532977.1, ENST00000622443.2, ENST00000622443.3, ENST00000642612.1, ENST00000642753.1, ENST00000643249.3, ENST00000644275.1, ENST00000645330.1, ENST00000646425.1, ENST00000646696.1, ENST00000647218.1, ENST00000647274.1

Found 616 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACGGTCTAGGCCACAGTGGGGAACGCAGGGGACAAGGACATCTTaGGAAAGAAGTCTCCAACTCACAGGAGAGATGCAGTGTGCTCGT +
Preference number: 1 (lower is better)
Translates to: PRSRPQWGTQGTRTS*ERSLQLTGEMQCAR
Trigger: ACGAGCACACTGCATCTCTCCTGTGAGTTGGAGACTTCTTTCCCAAGATGTCCTTGTCCCCTGCGTTCCCCACTGTGGCCTAGACCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR TCA 90 bp GGAAAGAAGTCTCCAACTCACAGGAGAGATGCAGTGTGCTCGTGCTaGAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCT +
Preference number: 1 (lower is better)
Translates to: GKKSPTHRRDAVCSC*RVGSLQSHQRVKAS
Trigger: AGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTGGAGACTTCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR GCA 90 bp GGACAAGGACATCTTGGGAAAGAAGTCTCCAACTCACAGGAGAGATaGAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCA +
Preference number: 1 (lower is better)
Translates to: GQGHLGKEVSNSQER*SVLVLKGGLPPVPS
Trigger: TGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTGGAGACTTCTTTCCCAAGATGTCCTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR TCA 90 bp CTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTaGGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTC +
Preference number: 1 (lower is better)
Translates to: LKGGLPPVPSACKGI*ENPTPASPNQIVDF
Trigger: GAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR TCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAGCAGTGTGCTCGTGCTaGAGGGTGGGCTCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: SRGPRARPSACSQILGARAVCSC*RVGSLQ
Trigger: CTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGC...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGTGCCGTCATTCGGGCTaGAGCAGGGGTCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: LSPEGPRGWAECLPDWLECRHSG*SRGPRA
Trigger: GGCCCTGGGACCCCTGCTCCAGCCCGAATGACGGCA...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGGCTCGTGCTGAAGGGTaGGCTCCCTCCAGTCCCATC +
Preference number: 2 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEARAEG*APSSPI
Trigger: GATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGC...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGCGGTCTAGGCCACAGTaGGGAACGCAGGGGACAAGG +
Preference number: 2 (lower is better)
Translates to: LSPEGPRGWAECLPDWLERSRPQ*GTQGTR
Trigger: CCTTGTCCCCTGCGTTCCCCACTGTGGCCTAGACCG...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR TCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGACGAAGGGTCTGCAGTaGACTCGAGGGGGTGCCGTT +
Preference number: 2 (lower is better)
Translates to: LSPEGPRGWAECLPDWLETKGLQ*TRGGAV
Trigger: AACGGCACCCCCTCGAGTTCACTGCAGACCCTTCGT...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGTGCCGTCATTCGGGCTaGAGCAGGGGTCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWCRHSG*SRGPRA
Trigger: GGCCCTGGGACCCCTGCTCCAGCCCGAATGACGGCA...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR GCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGCTGTGGTGGGTTAAGTaGCCCTGTAGCTCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: LSPEGPRGWAECLPDWLELWWVK*PCSSPG
Trigger: TCCTGGGGAGCTACAGGGGCACTTAACCCACCACAG...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGTGCCGTCATTCGGGCTaGAGCAGGGGTCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWCRHSG*SRGPRA
Trigger: GGCCCTGGGACCCCTGCTCCAGCCCGAATGACGGCA...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR GCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACTCACAGGAGAGATaGAGTGTGCTCGTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: SRGPRARPSACSQILGARNSQER*SVLVLK
Trigger: CTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTT...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGCCGTCATTCGGGCTaGAGCAGGGGTCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGCRHSG*SRGPRA
Trigger: GGCCCTGGGACCCCTGCTCCAGCCCGAATGACGGCA...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR TCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAGCAGTGTGCTCGTGCTaGAGGGTGGGCTCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGAVCSC*RVGSLQ
Trigger: CTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGC...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR GCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGCAAGTCCCAGGTCCGTaGAGGAATTTGAGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEQVPGP*RNLRRE
Trigger: TTCCCTCCTCAAATTCCTGCACGGACCTGGGACTTG...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGCTCGTGCTGAAGGGTaGGCTCCCTCCAGTCCCATC +
Preference number: 2 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMARAEG*APSSPI
Trigger: GATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGC...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGACGGTCTAGGCCACAGTaGGGAACGCAGGGGACAAGG +
Preference number: 2 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGRSRPQ*GTQGTR
Trigger: CCTTGTCCCCTGCGTTCCCCACTGTGGCCTAGACCG...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR GCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGCAAGTCCCAGGTCCGTaGAGGAATTTGAGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWQVPGP*RNLRRE
Trigger: TTCCCTCCTCAAATTCCTGCACGGACCTGGGACTTG...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR GCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGCAGGGCCTCCTTCTTTaGTATCCTCCAAGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWQGLLL*YPPSPR
Trigger: CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTG...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR TCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGGCGTGTAAAGGCATCTaGGAAAATCCAACACCCGCT +
Preference number: 2 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWACKGI*ENPTPA
Trigger: AGCGGGTGTTGGATTTTCTCAGATGCCTTTACACGC...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR GCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGCAAGTCCCAGGTCCGTaGAGGAATTTGAGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMQVPGP*RNLRRE
Trigger: TTCCCTCCTCAAATTCCTGCACGGACCTGGGACTTG...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR TCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACGCGTGTAAAGGCATCTaGGAAAATCCAACACCCGCT +
Preference number: 2 (lower is better)
Translates to: ARPSACSQILGARNTMQNACKGI*ENPTPA
Trigger: AGCGGGTGTTGGATTTTCTCAGATGCCTTTACACGC...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR GCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGACAAGTCCCAGGTCCGTaGAGGAATTTGAGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGQVPGP*RNLRRE
Trigger: TTCCCTCCTCAAATTCCTGCACGGACCTGGGACTTG...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR GCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACAACTCACAGGAGAGATaGAGTGTGCTCGTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: ARPSACSQILGARNTMQNNSQER*SVLVLK
Trigger: CTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTT...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR GCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGGTGCTAGAAACACAATaGAAAACCCACGGTCTAGGC +
Preference number: 2 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWVLETQ*KTHGLG
Trigger: GCCTAGACCGTGGGTTTTGCATTGTGTTTCTAGCAC...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR GCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAAACTCACAGGAGAGATaGAGTGTGCTCGTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGNSQER*SVLVLK
Trigger: CTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTT...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACTCCCAGTTGTTGTTCTaGAGTCATTACCAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: ARPSACSQILGARNTMQNSQLLF*SHYQAE
Trigger: CTCTGCCTGGTAATGACTCCAGAACAACAACTGGGA...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGTCCCAGTTGTTGTTCTaGAGTCATTACCAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMSQLLF*SHYQAE
Trigger: CTCTGCCTGGTAATGACTCCAGAACAACAACTGGGA...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR GCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTAACTCACAGGAGAGATaGAGTGTGCTCGTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGNSQER*SVLVLK
Trigger: CTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTT...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAATCCCAGTTGTTGTTCTaGAGTCATTACCAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQSQLLF*SHYQAE
Trigger: CTCTGCCTGGTAATGACTCCAGAACAACAACTGGGA...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CAA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGGGCCCGGCCCTCCGCTaGTTCTCAGATCCTCGGTGC +
Preference number: 3 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEGPALR*FSDPRC
Trigger: GCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCC...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
3UTR GCA 72 bp GGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTaGTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTT +
Preference number: 3 (lower is better)
Translates to: GGRPLGAQGLLL*YPPSPRSVQEF
Trigger: AAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CAA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGCCAGGGCCTCCTTCTTaGCTATCCTCCAAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: EMQCARAEGWAPSSPISVPGPPS*LSSKSQ
Trigger: CTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGG...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CAA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGGCCCGGCCCTCCGCTaGTTCTCAGATCCTCGGTGC +
Preference number: 3 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMGPALR*FSDPRC
Trigger: GCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCC...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CAA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGCCAGGGCCTCCTTCTTaGCTATCCTCCAAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWPGPPS*LSSKSQ
Trigger: CTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGG...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR TCA 72 bp TCTCCAACTCACAGGAGAGATGCAGTGTGCTCGTGCTaGAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTA +
Preference number: 3 (lower is better)
Translates to: SPTHRRDAVCSC*RVGSLQSHQRV
Trigger: TACACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR GCA 72 bp CCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATaGAAAACCCACGGTCTAGGCCACAGTGGGGAACGC +
Preference number: 3 (lower is better)
Translates to: PLVLRSSVLETQ*KTHGLGHSGER
Trigger: GCGTTCCCCACTGTGGCCTAGACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR TCA 72 bp GGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTaGGAAAATCCAACACCCGCTTCCCCTAACCAGATT +
Preference number: 3 (lower is better)
Translates to: GLPPVPSACKGI*ENPTPASPNQI
Trigger: AATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR CCA 72 bp AGAAACACAATGCAAAACCCACGGTCTAGGCCACAGTaGGGAACGCAGGGGACAAGGACATCTTGGGAAAGA +
Preference number: 3 (lower is better)
Translates to: RNTMQNPRSRPQ*GTQGTRTSWER
Trigger: TCTTTCCCAAGATGTCCTTGTCCCCTGCGTTCCCCACTGTGGCCTAGACCGTGGGTTTTGCATTGTGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CAA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTCCAGGGCCTCCTTCTTaGCTATCCTCCAAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSPGPPS*LSSKSQ
Trigger: CTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGG...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CAA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCACCAGGGCCTCCTTCTTaGCTATCCTCCAAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPPGPPS*LSSKSQ
Trigger: CTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGG...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR-3UTR CAA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACTTCCCCTAACCAGATaGTCGACTTCAAGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQLPLTR*STSSFF
Trigger: GAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGGCGGACAGCCGGCGCTaGGGCTTGATGAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRADSRR*GLMSGR
Trigger: CCGGCCGCTCATCAAGCCTCAGCGCCGGCTGTCCGC...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGGCGCCTCTGCGGCCCTaGCGCGAGGGATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRAPLRP*REGSGQ
Trigger: CTGTCCGGATCCCTCGCGGCAGGGCCGCAGAGGCGC...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR TCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAGCGGACAGCCGGCGCTaGGGCTTGATGAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARADSRR*GLMSGR
Trigger: CCGGCCGCTCATCAAGCCTCAGCGCCGGCTGTCCGC...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTGCGGACAGCCGGCGCTaGGGCTTGATGAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSADSRR*GLMSGR
Trigger: CCGGCCGCTCATCAAGCCTCAGCGCCGGCTGTCCGC...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCGCAGCCGGGGTCCTaGTGGGCCTGGAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSPQPGS*WAWRFR
Trigger: GCGGAACCTCCAGGCCCAGCAGGACCCCGGCTGCGG...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTGCCGTCATTCGGGCTaGAGCAGGGGTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRCRHSG*SRGPRA
Trigger: GGCCCTGGGACCCCTGCTCCAGCCCGAATGACGGCA...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGCCGCAGCCGGGGTCCTaGTGGGCCTGGAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAPQPGS*WAWRFR
Trigger: GCGGAACCTCCAGGCCCAGCAGGACCCCGGCTGCGG...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR GCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCGCTCCGCCGCCACTaGTGTAGGCCGCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSPLRRH*CRPQLP
Trigger: GGGAAGCTGCGGCCTACAGCAGTGGCGGCGGAGCGG...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGAAGCCGGGTAGGGGCTaGAGTAGGAGCCCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRKPGRG*SRSPRS
Trigger: GCTTCGCGGGCTCCTACTCCAGCCCCTACCCGGCTT...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAGGCCAGGCTCCGTCTTaGTGGGACGCATCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARGQAPS*WDASPR
Trigger: GCGAGGAGATGCGTCCCATCAAGACGGAGCCTGGCC...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGCCGCTCCGCCGCCACTaGTGTAGGCCGCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVPLRRH*CRPQLP
Trigger: GGGAAGCTGCGGCCTACAGCAGTGGCGGCGGAGCGG...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTGGCGTTGCTGGAGTTaGTGGAAGCACCGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRWRCWS*WKHRWR
Trigger: CCGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCA...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGAGGGATGCAGGGCGGTaGCATGCCTCAAGCGGATGG +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRRDAGR*HASSGW
Trigger: CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCT...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGGGGTCCTGCTGGGCCTaGAGGTTCCGCGCACGCTCC +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEGSCWA*RFRARS
Trigger: GGAGCGTGCGCGGAACCTCCAGGCCCAGCAGGACCC...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTGTCCAGGCCTGGAGGTaGCGCACGAGCCTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSVQAWR*RTSLRV
Trigger: GACCCGAAGGCTCGTGCGCCACCTCCAGGCCTGGAC...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTGGCAGCGTCCAGGCCTaGAGGTGGCGCACGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSGSVQA*RWRTSL
Trigger: AAGGCTCGTGCGCCACCTCCAGGCCTGGACGCTGCC...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGGGGGCGGCCCGTGGTTaGCGGCCATGGCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAGAARG*RPWPSS
Trigger: AGAGCTTGGCCATGGCCGCCAACCACGGGCCGCCCC...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGTGTGGGCACGTAGACTaGCGAGGACGCGGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLECGHVD*RGRGAR
Trigger: GCGGGCGCCGCGTCCTCGCCAGTCTACGTGCCCACA...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTGCTGGAAGCACCGCTaGCGGGAGGAAGGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRCWKHR*REEGSH
Trigger: GTGAGAGCCTTCCTCCCGCCAGCGGTGCTTCCAGCA...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTTGCCGTCATTCGGGCTaGAGCAGGGGTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSCRHSG*SRGPRA
Trigger: GGCCCTGGGACCCCTGCTCCAGCCCGAATGACGGCA...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGCTTGGATTCCCCCGCTaGGCCTGGGCGCCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSALGFPR*AWAPVC
Trigger: GCAGACCGGCGCCCAGGCCCAGCGGGGGAATCCAAG...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR TCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTGCGGACAGCCGGCGCTaGGGCTTGATGAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSADSRR*GLMSGR
Trigger: CCGGCCGCTCATCAAGCCTCAGCGCCGGCTGTCCGC...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTGGCCAGGCTCCGTCTTaGTGGGACGCATCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSGQAPS*WDASPR
Trigger: GCGAGGAGATGCGTCCCATCAAGACGGAGCCTGGCC...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAACCTCGAGGCTGGGCTaGGTGCTTGCCAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARTSRLG*VLARLA
Trigger: AGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGT...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGGACACTCCTGCCCCCTaGCCAGGACTCTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRDTPAP*PGLCPL
Trigger: AAGTGGACAGAGTCCTGGTCAGGGGGCAGGAGTGTC...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAGACGCATCTCCTCGCTaGTGCTGGTGGTGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARDASPR*CWWWRC
Trigger: GCAACGCCACCACCAGCAGCAGCGAGGAGATGCGTC...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAGGGATGCAGGGCGGTaGCATGCCTCAAGCGGATGG +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARRDAGR*HASSGW
Trigger: CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCT...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGGTCCAGGCCTGGAGGTaGCGCACGAGCCTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVVQAWR*RTSLRV
Trigger: GACCCGAAGGCTCGTGCGCCACCTCCAGGCCTGGAC...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTGGTGGTCTGGCAGTTaGCACAGGAGAGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRWWSGS*HRRGPL
Trigger: GAGTGGGCCTCTCCTGTGCCAACTGCCAGACCACCA...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTGGTGGTGGCGTTGCTaGAGTTGCTGGAAGCACCGC +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRWWWRC*SCWKHR
Trigger: GCGGTGCTTCCAGCAACTCCAGCAACGCCACCACCA...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCTCCTCGCTGCTGCTaGTGGTGGCGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRSPRCC*WWRCWS
Trigger: ACTCCAGCAACGCCACCACCAGCAGCAGCGAGGAGA...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTGCCGTCATTCGGGCTaGAGCAGGGGTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVCRHSG*SRGPRA
Trigger: GGCCCTGGGACCCCTGCTCCAGCCCGAATGACGGCA...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGACCTCAAGCGGATGGATaGGGCAAGGGCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARPQADG*GKGLSP
Trigger: TGGGGACAGGCCCTTGCCCCATCCATCCGCTTGAGG...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGCATGCCTCAAGCGGATaGATGGGGCAAGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRHASSG*MGQGPV
Trigger: GACAGGCCCTTGCCCCATCCATCCGCTTGAGGCATG...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTTCCCCCGCTGGGCCTaGGCGCCGGTCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAFPRWA*APVCDT
Trigger: AGTATCGCAGACCGGCGCCCAGGCCCAGCGGGGGAA...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCTGCAACACGGCCCTTaGATTCCCCCGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSLQHGP*IPPLGL
Trigger: CAGGCCCAGCGGGGGAATCCAAGGGCCGTGTTGCAG...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR TCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGGGCCAGGCTCCGTCTTaGTGGGACGCATCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAGQAPS*WDASPR
Trigger: GCGAGGAGATGCGTCCCATCAAGACGGAGCCTGGCC...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGGGCCAGGCTCCGTCTTaGTGGGACGCATCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVGQAPS*WDASPR
Trigger: GCGAGGAGATGCGTCCCATCAAGACGGAGCCTGGCC...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAGTGCCCGTAGTGAGATaGCAGGCCAGGCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARVPVVR*QARLRL
Trigger: AAGACGGAGCCTGGCCTGTCATCTCACTACGGGCAC...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGGGCCAGACATCGCACTaGCTGAGAACGTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRGQTSH*LRTSGT
Trigger: TGTCCCAGACGTTCTCAGTCAGTGCGATGTCTGGCC...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAGACACTCCTGCCCCCTaGCCAGGACTCTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARDTPAP*PGLCPL
Trigger: AAGTGGACAGAGTCCTGGTCAGGGGGCAGGAGTGTC...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATGGGAGCCCCCGGAGCTaGAGCGGCGACGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNGSPRS*SGDEAS
Trigger: AGAGGCTTCGTCGCCGCTGCAGCTCCGGGGGCTCCC...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGCTGTGGTGGGTTAAGTaGCCCTGTAGCTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRLWWVK*PCSSPG
Trigger: TCCTGGGGAGCTACAGGGGCACTTAACCCACCACAG...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGCGCCGAGAACCAGGGTaGAGAGCAGGATGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLERREPG*RAGCVP
Trigger: GGGGACGCATCCTGCTCTGCACCCTGGTTCTCGGCG...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGACCAAGCTCTGATACATaGTCCCTGCGAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARPSSDT*SLRAPG
Trigger: GCCGGGAGCTCGCAGGGACCATGTATCAGAGCTTGG...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGAAGCCGGGTAGGGGCTaGAGTAGGAGCCCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVKPGRG*SRSPRS
Trigger: GCTTCGCGGGCTCCTACTCCAGCCCCTACCCGGCTT...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGCTTGGAGCTGGTCTGTaGAGACTGGCTGACGGGAGA +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRLGAGL*RLADGR
Trigger: TCTCCCGTCAGCCAGTCTCCACAGACCAGCTCCAAG...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCGGTCTAGGCCACAGTaGGGAACGCAGGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSRSRPQ*GTQGTR
Trigger: CCTTGTCCCCTGCGTTCCCCACTGTGGCCTAGACCG...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAGGTCCTGAGGGACTCTaGCTGCCATCTGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARGPEGL*LPSDQG
Trigger: CCCTTGGTCAGATGGCAGCCAGAGTCCCTCAGGACC...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATCTTGGATTCCCCCGCTaGGCCTGGGCGCCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNLGFPR*AWAPVC
Trigger: GCAGACCGGCGCCCAGGCCCAGCGGGGGAATCCAAG...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR TCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGAAGGCTCTCACTGCCTaGAGGAGCTGCTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRKALTA*RSCWCL
Trigger: AAGACACCAGCAGCTCCTTCAGGCAGTGAGAGCCTT...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAGGAAGGAGTCTCCTTaGGCTCCAGCATCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARRKESP*APASGA
Trigger: TGCCCCTGATGCTGGAGCTCAAGGAGACTCCTTCCT...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTGGCGTTGCTGGAGTTaGTGGAAGCACCGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVWRCWS*WKHRWR
Trigger: CCGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCA...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGATCTGGGACACGGAGCTaGTGTGCCCGTAGTGAGATG +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARSGTRS*CARSEM
Trigger: CATCTCACTACGGGCACAGCAGCTCCGTGTCCCAGA...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGCAGGGCCTCCTTCTTTaGTATCCTCCAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRQGLLL*YPPSPR
Trigger: CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTG...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGTGCAGGGCGGTGCCATaGCTCAAGCGGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLECRAVP*LKRMDG
Trigger: CCCATCCATCCGCTTGAGGCATGGCACCGCCCTGCA...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGGCGCCTCTGCGGCCCTaGCGCGAGGGATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEEAPLRP*REGSGQ
Trigger: CTGTCCGGATCCCTCGCGGCAGGGCCGCAGAGGCGC...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR GCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGGGGTGCAGAGCAGGATaGGTCCCCGCGGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWGCRAG*VPAVGS
Trigger: GCTCCCCACCGCGGGGACGCATCCTGCTCTGCACCC...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGCAGAAGCTGCTAGGCTaGCTCCTTCCTCCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAQKLLG*LLPPRR
Trigger: GCGGCGAGGAGGAAGGAGCCAGCCTAGCAGCTTCTG...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGTGGGCACGTAGACTaGCGAGGACGCGGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGICGHVD*RGRGAR
Trigger: GCGGGCGCCGCGTCCTCGCCAGTCTACGTGCCCACA...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTTGGTGGTCTGGCAGTTaGCACAGGAGAGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSWWSGS*HRRGPL
Trigger: GAGTGGGCCTCTCCTGTGCCAACTGCCAGACCACCA...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGCGTTGCTGGAGTTGCTaGAAGCACCGCTGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVRCWSC*KHRWRE
Trigger: CTCCCGCCAGCGGTGCTTCCAGCAACTCCAGCAACG...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGACTGACTGAGAACGTCTaGGACACGGAGCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARLTENV*DTELLC
Trigger: GCACAGCAGCTCCGTGTCCCAGACGTTCTCAGTCAG...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGATGGATGGAGGGCCCATaGCCAGACATCGCACTGACT +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARWMEGP*PDIALT
Trigger: AGTCAGTGCGATGTCTGGCCATGGGCCCTCCATCCA...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTAGAGGACAGGGTGGATaGAGGGCCCATGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSRGQGG*RAHGQT
Trigger: TGTCTGGCCATGGGCCCTCCATCCACCCTGTCCTCT...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGACTTGGAGCTGGTCTGTaGAGACTGGCTGACGGGAGA +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARLGAGL*RLADGR
Trigger: TCTCCCGTCAGCCAGTCTCCACAGACCAGCTCCAAG...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGCCTCAAGCGGATGGATaGGGCAAGGGCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVPQADG*GKGLSP
Trigger: TGGGGACAGGCCCTTGCCCCATCCATCCGCTTGAGG...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGCCTCAAGCGGATGGATaGGGCAAGGGCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEPQADG*GKGLSP
Trigger: TGGGGACAGGCCCTTGCCCCATCCATCCGCTTGAGG...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTGAAGGACCTCGAGGCTaGGCTGAGTGCTTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSEGPRG*AECLPD
Trigger: GTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTC...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGACGGCTGCTCAAGGCCTaGTGTGAGGCAAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARRLLKA*CEANSA
Trigger: TGCAGAGTTTGCCTCACACCAGGCCTTGAGCAGCCG...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR TCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGCGGACAGCCGGCGCTaGGGCTTGATGAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQADSRR*GLMSGR
Trigger: CCGGCCGCTCATCAAGCCTCAGCGCCGGCTGTCCGC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGGTGCCCGTAGTGAGATaGCAGGCCAGGCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAVPVVR*QARLRL
Trigger: AAGACGGAGCCTGGCCTGTCATCTCACTACGGGCAC...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTGGCCAGACATCGCACTaGCTGAGAACGTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSGQTSH*LRTSGT
Trigger: TGTCCCAGACGTTCTCAGTCAGTGCGATGTCTGGCC...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGGTCCGTGCAGGAATTTaGGGAGGGAAGAGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRVRAGI*GGKRED
Trigger: ATCTTCCCTCTTCCCTCCTCAAATTCCTGCACGGAC...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACGGGAGCCCCCGGAGCTaGAGCGGCGACGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNGSPRS*SGDEAS
Trigger: AGAGGCTTCGTCGCCGCTGCAGCTCCGGGGGCTCCC...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGCGGCCGGGCAGGCTGTaGAGGACCGGGCTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEERPGRL*RTGLSK
Trigger: CTTCGACAGCCCGGTCCTGCACAGCCTGCCCGGCCG...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGCAAGTCCCAGGTCCGTaGAGGAATTTGAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRQVPGP*RNLRRE
Trigger: TTCCCTCCTCAAATTCCTGCACGGACCTGGGACTTG...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTACATGGCAAACAGATaGCGTCATTCGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRYMANR*RHSGWS
Trigger: GCTCCAGCCCGAATGACGGCATCTGTTTGCCATGTA...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGCCTGGGCGCCGGTCTaGGATACTCCTTCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIAWAPV*DTPSLR
Trigger: GCGCAGGGAAGGAGTATCGCAGACCGGCGCCCAGGC...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR GCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGCGGCGTCCCTGCGGCTaGTCAAGGCCTGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWRRPCG*SRPGVR
Trigger: CCTCACACCAGGCCTTGAGCAGCCGCAGGGACGCCG...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACGGGTCCTGCTGGGCCTaGAGGTTCCGCGCACGCTCC +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNGSCWA*RFRARS
Trigger: GGAGCGTGCGCGGAACCTCCAGGCCCAGCAGGACCC...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGGGGTCCTGCTGGGCCTaGAGGTTCCGCGCACGCTCC +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWGSCWA*RFRARS
Trigger: GGAGCGTGCGCGGAACCTCCAGGCCCAGCAGGACCC...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGGGCAGCGTCCAGGCCTaGAGGTGGCGCACGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWGSVQA*RWRTSL
Trigger: AAGGCTCGTGCGCCACCTCCAGGCCTGGACGCTGCC...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGGGGCGGCCCGTGGTTaGCGGCCATGGCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMGAARG*RPWPSS
Trigger: AGAGCTTGGCCATGGCCGCCAACCACGGGCCGCCCC...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTAGGGCACCCGCGGTGTaGGCACGTAGACTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIRAPAV*ARRLAR
Trigger: CCTCGCCAGTCTACGTGCCCACACCGCGGGTGCCCT...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGGCATTGCAAGAGGCCTaGGGACCCCGTGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVALQEA*GPRGAS
Trigger: TGAAGCTCCACGGGGTCCCCAGGCCTCTTGCAATGC...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTCTCCTCGCTGCTGCTaGTGGTGGCGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVSPRCC*WWRCWS
Trigger: ACTCCAGCAACGCCACCACCAGCAGCAGCGAGGAGA...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCTGACTGAGAACGTCTaGGACACGGAGCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSLTENV*DTELLC
Trigger: GCACAGCAGCTCCGTGTCCCAGACGTTCTCAGTCAG...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCTTGGAGCTGGTCTGTaGAGACTGGCTGACGGGAGA +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSLGAGL*RLADGR
Trigger: TCTCCCGTCAGCCAGTCTCCACAGACCAGCTCCAAG...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCAAGAGTCCTGCTTaGAGCTGGTCTGTGGAGACT +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRSKSPA*SWSVET
Trigger: AGTCTCCACAGACCAGCTCCAAGCAGGACTCTTGGA...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGCCGTCATTCGGGCTaGAGCAGGGGTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGICRHSG*SRGPRA
Trigger: GGCCCTGGGACCCCTGCTCCAGCCCGAATGACGGCA...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGCATGCCTCAAGCGGATaGATGGGGCAAGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAHASSG*MGQGPV
Trigger: GACAGGCCCTTGCCCCATCCATCCGCTTGAGGCATG...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGGGTCCTGAGGGACTCTaGCTGCCATCTGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVGPEGL*LPSDQG
Trigger: CCCTTGGTCAGATGGCAGCCAGAGTCCCTCAGGACC...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGAGGGGTCTGGGCGTGTaGGGAGGCGTAGTAATGCCA +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLERGLGV*GGVVMP
Trigger: TGGCATTACTACGCCTCCCCACACGCCCAGACCCCT...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGGAGGGCACCGCGGTGTaGGCACGTAGACTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWEGTAV*ARRLAR
Trigger: CCTCGCCAGTCTACGTGCCCACACCGCGGTGCCCTC...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645330.1
CDS-3UTR TCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTAAGGCTCTCACTGCCTaGAGGAGCTGCTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSKALTA*RSCWCL
Trigger: AAGACACCAGCAGCTCCTTCAGGCAGTGAGAGCCTT...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTAGACATCGCACTGACTaGGAACGTCTGGGACACGGA +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSRHRTD*ERLGHG
Trigger: TCCGTGTCCCAGACGTTCTCAGTCAGTGCGATGTCT...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGGCAGTGTGCTCGTGCTaGAGGGTGGGCTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWAVCSC*RVGSLQ
Trigger: CTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGC...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATACCTCGAGGCTGGGCTaGGTGCTTGCCAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNTSRLG*VLARLA
Trigger: AGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGT...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGACCGCTCCGCCGCCACTaGTGTAGGCCGCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGPLRRH*CRPQLP
Trigger: GGGAAGCTGCGGCCTACAGCAGTGGCGGCGGAGCGG...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACGGCCGGGCAGGCTGTaGAGGACCGGGCTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQRPGRL*RTGLSK
Trigger: CTTCGACAGCCCGGTCCTGCACAGCCTGCCCGGCCG...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGACGGCCGGGCAGGCTGTaGAGGACCGGGCTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGRPGRL*RTGLSK
Trigger: CTTCGACAGCCCGGTCCTGCACAGCCTGCCCGGCCG...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGGCGTTGCTGGAGTTaGTGGAAGCACCGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNWRCWS*WKHRWR
Trigger: CCGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCA...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTCTGGGACACGGAGCTaGTGTGCCCGTAGTGAGATG +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSASGTRS*CARSEM
Trigger: CATCTCACTACGGGCACAGCAGCTCCGTGTCCCAGA...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGTCTGGGACACGGAGCTaGTGTGCCCGTAGTGAGATG +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLESGTRS*CARSEM
Trigger: CATCTCACTACGGGCACAGCAGCTCCGTGTCCCAGA...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCAGGGCCTCCTTCTTTaGTATCCTCCAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSQGLLL*YPPSPR
Trigger: CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTG...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTTGCAGGGCGGTGCCATaGCTCAAGCGGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSCRAVP*LKRMDG
Trigger: CCCATCCATCCGCTTGAGGCATGGCACCGCCCTGCA...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGCTGTGGTGGGTTAAGTaGCCCTGTAGCTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVLWWVK*PCSSPG
Trigger: TCCTGGGGAGCTACAGGGGCACTTAACCCACCACAG...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGACCTGGGGGAGAAGTTaGCAGCTGCATTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRTWGRS*QLHFDE
Trigger: CTCATCAAAATGCAGCTGGCAACTTCTCCCCCAGGT...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGGGTGAACGAAGGGTCTaGAGTGAACTCGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEGERRV*SELEGV
Trigger: CACCCCCTCGAGTTCACTGCAGACCCTTCGTTCACC...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTATATGGACGCGCCTCTaGGGCCCTGCCGCGAGGGAT +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIIWTRL*GPAARD
Trigger: ATCCCTCGCGGCAGGGCCGCAGAGGCGCGTCCATAT...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR GCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGCGGCGTCCCTGCGGCTaGTCAAGGCCTGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWRRPCG*SRPGVR
Trigger: CCTCACACCAGGCCTTGAGCAGCCGCAGGGACGCCG...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR GCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGGGGAGCGGCGTCCCTaGGGCTGCTCAAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQGERRP*GCSRPG
Trigger: ACCAGGCCTTGAGCAGCCGCAGGGACGCCGCTCCCC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR GCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGGGTGCAGAGCAGGATaGGTCCCCGCGGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQGCRAG*VPAVGS
Trigger: GCTCCCCACCGCGGGGACGCATCCTGCTCTGCACCC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGGGCAGCGTCCAGGCCTaGAGGTGGCGCACGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPGSVQA*RWRTSL
Trigger: AAGGCTCGTGCGCCACCTCCAGGCCTGGACGCTGCC...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGCGTGGTTGGCGGCCATaGCCAAGCTCTGATACATGG +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSARGWRP*PSSDTW
Trigger: CCATGTATCAGAGCTTGGCCATGGCCGCCAACCACG...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGTGGGCACGTAGACTaGCGAGGACGCGGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGCGHVD*RGRGAR
Trigger: GCGGGCGCCGCGTCCTCGCCAGTCTACGTGCCCACA...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGAGGGCACCCGCGGTGTaGGCACGTAGACTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPRAPAV*ARRLAR
Trigger: CCTCGCCAGTCTACGTGCCCACACCGCGGGTGCCCT...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACAGGGCACCCGCGGTGTaGGCACGTAGACTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNRAPAV*ARRLAR
Trigger: CCTCGCCAGTCTACGTGCCCACACCGCGGGTGCCCT...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGCAAACATATCGAGATTaGGGTGTCGGGCGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAQTYRD*GVGRPG
Trigger: ACCCGGCCGCCCGACACCCCAATCTCGATATGTTTG...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000645330.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTGGGCTTCCGTTTTCTaGTTTGGATCCCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRWASVF*FGSPLS
Trigger: GGAAAGAGGGGATCCAAACCAGAAAACGGAAGCCCA...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGCTGACTGAGAACGTCTaGGACACGGAGCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSALTENV*DTELLC
Trigger: GCACAGCAGCTCCGTGTCCCAGACGTTCTCAGTCAG...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGATCCAAGAGTCCTGCTTaGAGCTGGTCTGTGGAGACT +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARSKSPA*SWSVET
Trigger: AGTCTCCACAGACCAGCTCCAAGCAGGACTCTTGGA...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCGGTCTAGGCCACAGTaGGGAACGCAGGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSRSRPQ*GTQGTR
Trigger: CCTTGTCCCCTGCGTTCCCCACTGTGGCCTAGACCG...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACTGCCGTCATTCGGGCTaGAGCAGGGGTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNCRHSG*SRGPRA
Trigger: GGCCCTGGGACCCCTGCTCCAGCCCGAATGACGGCA...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACTTCCCCCGCTGGGCCTaGGCGCCGGTCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNFPRWA*APVCDT
Trigger: AGTATCGCAGACCGGCGCCCAGGCCCAGCGGGGGAA...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGCGGCTGCTCAAGGCCTaGTGTGAGGCAAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVRLLKA*CEANSA
Trigger: TGCAGAGTTTGCCTCACACCAGGCCTTGAGCAGCCG...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGGGGCGGCCCGTGGTTaGCGGCCATGGCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQGAARG*RPWQAL
Trigger: CAGAGCTTGCCATGGCCGCCAACCACGGGCCGCCCC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645330.1
CDS-3UTR TCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATATTCACCCCAGGGCCTaGAGGTCCGGCGCACCTATT +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNIHPRA*RSGAPI
Trigger: AATAGGTGCGCCGGACCTTCAGGCCCTGGGGTGAAT...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR TCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGAAGGCTCTCACTGCCTaGAGGAGCTGCTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEKALTA*RSCWCL
Trigger: AAGACACCAGCAGCTCCTTCAGGCAGTGAGAGCCTT...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGAAGGCTCTCACTGCCTaGAGGAGCTGCTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVKALTA*RSCWCL
Trigger: AAGACACCAGCAGCTCCTTCAGGCAGTGAGAGCCTT...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGAAGGCTCTCACTGCCTaGAGGAGCTGCTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAKALTA*RSCWCL
Trigger: AAGACACCAGCAGCTCCTTCAGGCAGTGAGAGCCTT...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGAGACATCGCACTGACTaGGAACGTCTGGGACACGGA +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLERHRTD*ERLGHG
Trigger: TCCGTGTCCCAGACGTTCTCAGTCAGTGCGATGTCT...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGAGACATCGCACTGACTaGGAACGTCTGGGACACGGA +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSARHRTD*ERLGHG
Trigger: TCCGTGTCCCAGACGTTCTCAGTCAGTGCGATGTCT...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGGCAGTGTGCTCGTGCTaGAGGGTGGGCTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPAVCSC*RVGSLQ
Trigger: CTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGC...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGGCAGTGTGCTCGTGCTaGAGGGTGGGCTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWAVCSC*RVGSLQ
Trigger: CTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGC...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTACGAAGGGTCTGCAGTaGACTCGAGGGGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSTKGLQ*TRGGAV
Trigger: AACGGCACCCCCTCGAGTTCACTGCAGACCCTTCGT...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGACCTCGAGGCTGGGCTaGGTGCTTGCCAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWTSRLG*VLARLA
Trigger: AGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGT...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTGACACTCCTGCCCCCTaGCCAGGACTCTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSDTPAP*PGLCPL
Trigger: AAGTGGACAGAGTCCTGGTCAGGGGGCAGGAGTGTC...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGGACAGACATTCAAGGTaGCCCGCGCAGAACGAATGC +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEDRHSR*PAQNEC
Trigger: GCATTCGTTCTGCGCGGGTCACCTTGAATGTCTGTC...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR TCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGGACAGACATTCAAGGTaGCCCGCGCAGAACGAATGC +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVDRHSR*PAQNEC
Trigger: GCATTCGTTCTGCGCGGGTCACCTTGAATGTCTGTC...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR GCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTCCCCTCTTTCCGCATTaGAAGAGGCCTGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIPLFPH*KRPGDP
Trigger: GGGGTCCCCAGGCCTCTTGCAATGCGGAAAGAGGGG...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGTGGCGTTGCTGGAGTTaGTGGAAGCACCGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWWRCWS*WKHRWR
Trigger: CCGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCA...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGACGCATCTCCTCGCTaGTGCTGGTGGTGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIDASPR*CWWWRC
Trigger: GCAACGCCACCACCAGCAGCAGCGAGGAGATGCGTC...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATGCTGGGCTGAGTGCTTaGCAGACTGGCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNAGLSA*QTGLSS
Trigger: GCTGCTCAAGCCAGTCTGGCAAGCACTCAGCCCAGC...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTGCTGGGCTGAGTGCTTaGCAGACTGGCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSAGLSA*QTGLSS
Trigger: GCTGCTCAAGCCAGTCTGGCAAGCACTCAGCCCAGC...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTGCAGAAACAGCAATGTaGAGAGGAGAACGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSAETAM*RGERGR
Trigger: TCTGCCGCGTTCTCCTCTGCACATTGCTGTTTCTGC...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGCCTGGGCGCCGGTCTaGGATACTCCTTCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQAWAPV*DTPSLR
Trigger: GCGCAGGGAAGGAGTATCGCAGACCGGCGCCCAGGC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR GCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGACGAATGCCGAGTCCTaGAACACGGCCCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVTNAES*NTALGF
Trigger: GAATCCAAGGGCCGTGTTGCAGGACTCGGCATTCGT...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTCAGCCGGGGTCCTGCTaGGCCTGGAGGTTCCGCGCA +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGQPGSC*AWRFRA
Trigger: TGCGCGGAACCTCCAGGCCCAGCAGGACCCCGGCTG...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGGTCCGGCGCACCTATTaGGGGCAGAAGACGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPVRRTY*GQKTEG
Trigger: GCCCTCCGTCTTCTGCCCCCAATAGGTGCGCCGGAC...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGGTCCGGCGCACCTATTaGGGGCAGAAGACGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEEVRRTY*GQKTEG
Trigger: GCCCTCCGTCTTCTGCCCCCAATAGGTGCGCCGGAC...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATCCAAGCTCTGATACATaGTCCCTGCGAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNPSSDT*SLRAPG
Trigger: GCCGGGAGCTCGCAGGGACCATGTATCAGAGCTTGG...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCAAGCTCTGATACATaGTCCCTGCGAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSPSSDT*SLRAPG
Trigger: GCCGGGAGCTCGCAGGGACCATGTATCAGAGCTTGG...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTGGGGCGGCCCGTGGTTaGCGGCCATGGCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGGAARG*RPWPSS
Trigger: AGAGCTTGGCCATGGCCGCCAACCACGGGCCGCCCC...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACAAGCCGGGTAGGGGCTaGAGTAGGAGCCCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNKPGRG*SRSPRS
Trigger: GCTTCGCGGGCTCCTACTCCAGCCCCTACCCGGCTT...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGGTGGTCTGGCAGTTaGCACAGGAGAGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNWWSGS*HRRGPL
Trigger: GAGTGGGCCTCTCCTGTGCCAACTGCCAGACCACCA...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGATGGGCTTCCGTTTTCTaGTTTGGATCCCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARWASVF*FGSPLS
Trigger: GGAAAGAGGGGATCCAAACCAGAAAACGGAAGCCCA...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGCTGGAAGCACCGCTaGCGGGAGGAAGGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGICWKHR*REEGSH
Trigger: GTGAGAGCCTTCCTCCCGCCAGCGGTGCTTCCAGCA...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGCGTTGCTGGAGTTGCTaGAAGCACCGCTGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWRCWSC*KHRWRE
Trigger: CTCCCGCCAGCGGTGCTTCCAGCAACTCCAGCAACG...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTCTCCTCGCTGCTGCTaGTGGTGGCGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNSPRCC*WWRCWS
Trigger: ACTCCAGCAACGCCACCACCAGCAGCAGCGAGGAGA...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCCAGTTGTTGTTCTaGAGTCATTACCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRSQLLF*SHYQAE
Trigger: CTCTGCCTGGTAATGACTCCAGAACAACAACTGGGA...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGCTCGTGCTGAAGGGTaGGCTCCCTCCAGTCCCATC +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIARAEG*APSSPI
Trigger: GATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGC...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATGAAGGACCTCGAGGCTaGGCTGAGTGCTTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNEGPRG*AECLPD
Trigger: GTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTC...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGAATTCCTCCAAGATATaGACGCGCCTCTGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSANSSKI*TRLCGP
Trigger: AGGGCCGCAGAGGCGCGTCCATATCTTGGAGGAATT...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR TCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTGCGGACAGCCGGCGCTaGGGCTTGATGAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSADSRR*GLMSGR
Trigger: CCGGCCGCTCATCAAGCCTCAGCGCCGGCTGTCCGC...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGGCCAGGCTCCGTCTTaGTGGGACGCATCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQGQAPS*WDASPR
Trigger: GCGAGGAGATGCGTCCCATCAAGACGGAGCCTGGCC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTGGCCAGACATCGCACTaGCTGAGAACGTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSGQTSH*LRTSGT
Trigger: TGTCCCAGACGTTCTCAGTCAGTGCGATGTCTGGCC...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTGTGATTATGTCCCCGTaGCTGTCGGCCAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSVIMSP*LSAKTR
Trigger: CCTGGTCTTGGCCGACAGTCACGGGGACATAATCAC...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGGTCCGTGCAGGAATTTaGGGAGGGAAGAGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEVRAGI*GGKRED
Trigger: ATCTTCCCTCTTCCCTCCTCAAATTCCTGCACGGAC...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGCAGTGTGCTCGTGCTaGAGGGTGGGCTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQAVCSC*RVGSLQ
Trigger: CTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGACCTCGAGGCTGGGCTaGGTGCTTGCCAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPTSRLG*VLARLA
Trigger: AGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGT...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGACACTCCTGCCCCCTaGCCAGGACTCTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIDTPAP*PGLCPL
Trigger: AAGTGGACAGAGTCCTGGTCAGGGGGCAGGAGTGTC...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGCCCCTCTTTCCGCATTaGAAGAGGCCTGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWPLFPH*KRPGDP
Trigger: GGGGTCCCCAGGCCTCTTGCAATGCGGAAAGAGGGG...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGCCCCTCTTTCCGCATTaGAAGAGGCCTGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMPLFPH*KRPGDP
Trigger: GGGGTCCCCAGGCCTCTTGCAATGCGGAAAGAGGGG...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCCCTCTTTCCGCATTaGAAGAGGCCTGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNPLFPH*KRPGDP
Trigger: GGGGTCCCCAGGCCTCTTGCAATGCGGAAAGAGGGG...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGCCCCTCTTTCCGCATTaGAAGAGGCCTGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPPLFPH*KRPGDP
Trigger: GGGGTCCCCAGGCCTCTTGCAATGCGGAAAGAGGGG...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTTGCTGGTGGTGGCGTTaGTGGAGTTGCTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSCWWWR*WSCWKH
Trigger: GTGCTTCCAGCAACTCCAGCAACGCCACCACCAGCA...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACGACGCATCTCCTCGCTaGTGCTGGTGGTGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNDASPR*CWWWRC
Trigger: GCAACGCCACCACCAGCAGCAGCGAGGAGATGCGTC...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTTCTGGGACACGGAGCTaGTGTGCCCGTAGTGAGATG +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSSGTRS*CARSEM
Trigger: CATCTCACTACGGGCACAGCAGCTCCGTGTCCCAGA...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAGTGCTAGAAACACAATaGAAAACCCACGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARVLETQ*KTHGLG
Trigger: GCCTAGACCGTGGGTTTTGCATTGTGTTTCTAGCAC...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTACATGGCAAACAGATaGCGTCATTCGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVYMANR*RHSGWS
Trigger: GCTCCAGCCCGAATGACGGCATCTGTTTGCCATGTA...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGTGCAGGGCGGTGCCATaGCTCAAGCGGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEECRAVP*LKRMDG
Trigger: CCCATCCATCCGCTTGAGGCATGGCACCGCCCTGCA...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGTGCAGGGCGGTGCCATaGCTCAAGCGGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWCRAVP*LKRMDG
Trigger: CCCATCCATCCGCTTGAGGCATGGCACCGCCCTGCA...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGAGGGATGCAGGGCGGTaGCATGCCTCAAGCGGATGG +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEERDAGR*HASSGW
Trigger: CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCT...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGAGGGATGCAGGGCGGTaGCATGCCTCAAGCGGATGG +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPRDAGR*HASSGW
Trigger: CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCT...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCTGTGGTGGGTTAAGTaGCCCTGTAGCTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSLWWVK*PCSSPG
Trigger: TCCTGGGGAGCTACAGGGGCACTTAACCCACCACAG...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGCCCGCGCAGAACGAATaGCGAGTCCTGCAACACGGC +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEEPAQNE*RVLQHG
Trigger: GCCGTGTTGCAGGACTCGGCATTCGTTCTGCGCGGG...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCGTGGTTGGCGGCCATaGCCAAGCTCTGATACATGG +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSRGWRP*PSSDTW
Trigger: CCATGTATCAGAGCTTGGCCATGGCCGCCAACCACG...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCAAACATATCGAGATTaGGGTGTCGGGCGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSQTYRD*GVGRPG
Trigger: ACCCGGCCGCCCGACACCCCAATCTCGATATGTTTG...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000645330.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGGTGGTCTGGCAGTTaGCACAGGAGAGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIWWSGS*HRRGPL
Trigger: GAGTGGGCCTCTCCTGTGCCAACTGCCAGACCACCA...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTTCCGTTTTCTGGTTTaGATCCCCTCTTTCCGCATT +
Preference number: 4 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRFRFLV*IPSFRI
Trigger: AATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAA...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGTGCTGGAAGCACCGCTaGCGGGAGGAAGGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMCWKHR*REEGSH
Trigger: GTGAGAGCCTTCCTCCCGCCAGCGGTGCTTCCAGCA...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGCGTTGCTGGAGTTGCTaGAAGCACCGCTGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPRCWSC*KHRWRE
Trigger: CTCCCGCCAGCGGTGCTTCCAGCAACTCCAGCAACG...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCGTTGCTGGAGTTGCTaGAAGCACCGCTGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNRCWSC*KHRWRE
Trigger: CTCCCGCCAGCGGTGCTTCCAGCAACTCCAGCAACG...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGCGTTGCTGGAGTTGCTaGAAGCACCGCTGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEERCWSC*KHRWRE
Trigger: CTCCCGCCAGCGGTGCTTCCAGCAACTCCAGCAACG...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGGTGGTGGCGTTGCTaGAGTTGCTGGAAGCACCGC +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIWWWRC*SCWKHR
Trigger: GCGGTGCTTCCAGCAACTCCAGCAACGCCACCACCA...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGTCTCCTCGCTGCTGCTaGTGGTGGCGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWSPRCC*WWRCWS
Trigger: ACTCCAGCAACGCCACCACCAGCAGCAGCGAGGAGA...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGGATGGAGGGCCCATaGCCAGACATCGCACTGACT +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNWMEGP*PDIALT
Trigger: AGTCAGTGCGATGTCTGGCCATGGGCCCTCCATCCA...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGAGAGGACAGGGTGGATaGAGGGCCCATGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWRGQGG*RAHGQT
Trigger: TGTCTGGCCATGGGCCCTCCATCCACCCTGTCCTCT...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTAGACGCATAGCCTTGTaGGGAGAGCTTCAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSRRIAL*GELQGR
Trigger: TCGGCCCTGAAGCTCTCCCCACAAGGCTATGCGTCT...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATCTTGGAGCTGGTCTGTaGAGACTGGCTGACGGGAGA +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNLGAGL*RLADGR
Trigger: TCTCCCGTCAGCCAGTCTCCACAGACCAGCTCCAAG...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGATCCCAGTTGTTGTTCTaGAGTCATTACCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARSQLLF*SHYQAE
Trigger: CTCTGCCTGGTAATGACTCCAGAACAACAACTGGGA...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACGCTCGTGCTGAAGGGTaGGCTCCCTCCAGTCCCATC +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNARAEG*APSSPI
Trigger: GATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGC...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGGCTCGTGCTGAAGGGTaGGCTCCCTCCAGTCCCATC +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEEARAEG*APSSPI
Trigger: GATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGC...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCGGTCTAGGCCACAGTaGGGAACGCAGGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNRSRPQ*GTQGTR
Trigger: CCTTGTCCCCTGCGTTCCCCACTGTGGCCTAGACCG...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGCGGTCTAGGCCACAGTaGGGAACGCAGGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWRSRPQ*GTQGTR
Trigger: CCTTGTCCCCTGCGTTCCCCACTGTGGCCTAGACCG...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGCCTCAAGCGGATGGATaGGGCAAGGGCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPPQADG*GKGLSP
Trigger: TGGGGACAGGCCCTTGCCCCATCCATCCGCTTGAGG...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGAAGGACCTCGAGGCTaGGCTGAGTGCTTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIEGPRG*AECLPD
Trigger: GTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTC...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGGGTCCTGAGGGACTCTaGCTGCCATCTGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWGPEGL*LPSDQG
Trigger: CCCTTGGTCAGATGGCAGCCAGAGTCCCTCAGGACC...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGGCCATGGCCAAGCTCTaGTACATGGTCCCTGCGAGC +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEEAMAKL*YMVPAS
Trigger: GCTCGCAGGGACCATGTATCAGAGCTTGGCCATGGC...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR TCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAACACTCTCTGCCTTCTaGGAAGTCGTCAAACATATC +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARTLSAF*EVVKHI
Trigger: GATATGTTTGACGACTTCTCAGAAGGCAGAGAGTGT...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGGGCCAGACATCGCACTaGCTGAGAACGTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWGQTSH*LRTSGT
Trigger: TGTCCCAGACGTTCTCAGTCAGTGCGATGTCTGGCC...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGTGATTATGTCCCCGTaGCTGTCGGCCAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIVIMSP*LSAKTR
Trigger: CCTGGTCTTGGCCGACAGTCACGGGGACATAATCAC...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGGGGAAGATTACGCAGTaGTTATGTCCCCGTGACTGT +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEGKITQ*LCPRDC
Trigger: ACAGTCACGGGGACATAATCACTGCGTAATCTTCCC...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGACGAAGGGTCTGCAGTaGACTCGAGGGGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWTKGLQ*TRGGAV
Trigger: AACGGCACCCCCTCGAGTTCACTGCAGACCCTTCGT...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGACGAAGGGTCTGCAGTaGACTCGAGGGGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPTKGLQ*TRGGAV
Trigger: AACGGCACCCCCTCGAGTTCACTGCAGACCCTTCGT...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATGAACCCCTCTATGTGTaGCACGGTGAACGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNEPLYV*HGERRV
Trigger: GACCCTTCGTTCACCGTGTCACACATAGAGGGGTTC...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTGAACCCCTCTATGTGTaGCACGGTGAACGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSEPLYV*HGERRV
Trigger: GACCCTTCGTTCACCGTGTCACACATAGAGGGGTTC...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAACCTCGAGGCTGGGCTaGGTGCTTGCCAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQTSRLG*VLARLA
Trigger: AGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGT...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGAGGAAGGAGTCTCCTTaGGCTCCAGCATCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWRKESP*APASGA
Trigger: TGCCCCTGATGCTGGAGCTCAAGGAGACTCCTTCCT...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTGGGAGCCCCCGGAGCTaGAGCGGCGACGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSGSPRS*SGDEAS
Trigger: AGAGGCTTCGTCGCCGCTGCAGCTCCGGGGGCTCCC...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR GCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTCGGCCGGGCAGGCTGTaGAGGACCGGGCTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSRPGRL*RTGLSK
Trigger: CTTCGACAGCCCGGTCCTGCACAGCCTGCCCGGCCG...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAATGGCGTTGCTGGAGTTaGTGGAAGCACCGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQWRCWS*WKHRWR
Trigger: CCGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCA...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGACGCATCTCCTCGCTaGTGCTGGTGGTGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQDASPR*CWWWRC
Trigger: GCAACGCCACCACCAGCAGCAGCGAGGAGATGCGTC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCAGGGCCTCCTTCTTTaGTATCCTCCAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSQGLLL*YPPSPR
Trigger: CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTG...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGAACTCACAGGAGAGATaGAGTGTGCTCGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSANSQER*SVLVLK
Trigger: CTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTT...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAAGGGATGCAGGGCGGTaGCATGCCTCAAGCGGATGG +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGRDAGR*HASSGW
Trigger: CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCT...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGACCTGGGGGAGAAGTTaGCAGCTGCATTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVTWGRS*QLHFDE
Trigger: CTCATCAAAATGCAGCTGGCAACTTCTCCCCCAGGT...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGGGTGAACGAAGGGTCTaGAGTGAACTCGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWGERRV*SELEGV
Trigger: CACCCCCTCGAGTTCACTGCAGACCCTTCGTTCACC...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGGCTGGGCTGAGTGCTTaGCAGACTGGCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWAGLSA*QTGLSS
Trigger: GCTGCTCAAGCCAGTCTGGCAAGCACTCAGCCCAGC...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGACAGAAGCTGCTAGGCTaGCTCCTTCCTCCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGQKLLG*LLPPRR
Trigger: GCGGCGAGGAGGAAGGAGCCAGCCTAGCAGCTTCTG...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTGTCCGGCGCACCTATTaGGGGCAGAAGACGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGVRRTY*GQKTEG
Trigger: GCCCTCCGTCTTCTGCCCCCAATAGGTGCGCCGGAC...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTCAAACATATCGAGATTaGGGTGTCGGGCGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIQTYRD*GVGRPG
Trigger: ACCCGGCCGCCCGACACCCCAATCTCGATATGTTTG...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000645330.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGGCATTGCAAGAGGCCTaGGGACCCCGTGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPALQEA*GPRGAS
Trigger: TGAAGCTCCACGGGGTCCCCAGGCCTCTTGCAATGC...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGATTCCGTTTTCTGGTTTaGATCCCCTCTTTCCGCATT +
Preference number: 4 (lower is better)
Translates to: SRGPRARPSACSQILGARFRFLV*IPSFRI
Trigger: AATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAA...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGGGCTTCCGTTTTCTaGTTTGGATCCCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAWASVF*FGSPLS
Trigger: GGAAAGAGGGGATCCAAACCAGAAAACGGAAGCCCA...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGTGGTGGTGGCGTTGCTaGAGTTGCTGGAAGCACCGC +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWWWWRC*SCWKHR
Trigger: GCGGTGCTTCCAGCAACTCCAGCAACGCCACCACCA...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGTGGTGGTGGCGTTGCTaGAGTTGCTGGAAGCACCGC +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPWWWRC*SCWKHR
Trigger: GCGGTGCTTCCAGCAACTCCAGCAACGCCACCACCA...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACTGGTGGTGGCGTTGCTaGAGTTGCTGGAAGCACCGC +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNWWWRC*SCWKHR
Trigger: GCGGTGCTTCCAGCAACTCCAGCAACGCCACCACCA...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGTCTCCTCGCTGCTGCTaGTGGTGGCGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPSPRCC*WWRCWS
Trigger: ACTCCAGCAACGCCACCACCAGCAGCAGCGAGGAGA...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGAGAGGACAGGGTGGATaGAGGGCCCATGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPRGQGG*RAHGQT
Trigger: TGTCTGGCCATGGGCCCTCCATCCACCCTGTCCTCT...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGAGAGGACAGGGTGGATaGAGGGCCCATGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMRGQGG*RAHGQT
Trigger: TGTCTGGCCATGGGCCCTCCATCCACCCTGTCCTCT...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGAGACGCATAGCCTTGTaGGGAGAGCTTCAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWRRIAL*GELQGR
Trigger: TCGGCCCTGAAGCTCTCCCCACAAGGCTATGCGTCT...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTCTTGGAGCTGGTCTGTaGAGACTGGCTGACGGGAGA +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGILGAGL*RLADGR
Trigger: TCTCCCGTCAGCCAGTCTCCACAGACCAGCTCCAAG...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACGGTCTAGGCCACAGTaGGGAACGCAGGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQRSRPQ*GTQGTR
Trigger: CCTTGTCCCCTGCGTTCCCCACTGTGGCCTAGACCG...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGCATGCCTCAAGCGGATaGATGGGGCAAGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPHASSG*MGQGPV
Trigger: GACAGGCCCTTGCCCCATCCATCCGCTTGAGGCATG...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGCATGCCTCAAGCGGATaGATGGGGCAAGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWHASSG*MGQGPV
Trigger: GACAGGCCCTTGCCCCATCCATCCGCTTGAGGCATG...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGGAAGGACCTCGAGGCTaGGCTGAGTGCTTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWEGPRG*AECLPD
Trigger: GTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTC...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGAAGGACCTCGAGGCTaGGCTGAGTGCTTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMEGPRG*AECLPD
Trigger: GTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTC...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGGGTCCTGAGGGACTCTaGCTGCCATCTGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEEGPEGL*LPSDQG
Trigger: CCCTTGGTCAGATGGCAGCCAGAGTCCCTCAGGACC...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACAGGGGTCTGGGCGTGTaGGGAGGCGTAGTAATGCCA +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNRGLGV*GGVVMP
Trigger: TGGCATTACTACGCCTCCCCACACGCCCAGACCCCT...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGACATATCTACGAGATTaGGGTGTCGGGCGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWTYLRD*GVGRPG
Trigger: ACCCGGCCGCCCGACACCCCAATCTCGTAGATATGT...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532059.6
CDS-3UTR TCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAATTCACCCCAGGGCCTaGAGGTCCGGCGCACCTATT +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGIHPRA*RSGAPI
Trigger: AATAGGTGCGCCGGACCTTCAGGCCCTGGGGTGAAT...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR TCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGTGCCCGTAGTGAGATaGCAGGCCAGGCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQVPVVR*QARLRL
Trigger: AAGACGGAGCCTGGCCTGTCATCTCACTACGGGCAC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAGTGCCCGTAGTGAGATaGCAGGCCAGGCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGVPVVR*QARLRL
Trigger: AAGACGGAGCCTGGCCTGTCATCTCACTACGGGCAC...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGAGACATCGCACTGACTaGGAACGTCTGGGACACGGA +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWRHRTD*ERLGHG
Trigger: TCCGTGTCCCAGACGTTCTCAGTCAGTGCGATGTCT...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGTCTGTGGAGACTGGCTaGCGGGAGACGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEESVETG*RETHSL
Trigger: AAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGA...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACTCTGTGGAGACTGGCTaGCGGGAGACGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNSVETG*RETHSL
Trigger: AAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGA...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGTCTGTGGAGACTGGCTaGCGGGAGACGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPSVETG*RETHSL
Trigger: AAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGA...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACGTGATTATGTCCCCGTaGCTGTCGGCCAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNVIMSP*LSAKTR
Trigger: CCTGGTCTTGGCCGACAGTCACGGGGACATAATCAC...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGACACTCCTGCCCCCTaGCCAGGACTCTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQDTPAP*PGLCPL
Trigger: AAGTGGACAGAGTCCTGGTCAGGGGGCAGGAGTGTC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGACTGATACATGGTCCCTaGGAGCTCCCGGCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGLIHGP*ELPASV
Trigger: CACCGAAGCCGGGAGCTCGCAGGGACCATGTATCAG...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR GCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGCCGCTCCGCCGCCACTaGTGTAGGCCGCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEPLRRH*CRPQLP
Trigger: GGGAAGCTGCGGCCTACAGCAGTGGCGGCGGAGCGG...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGTGCTGGTGGTGGCGTTaGTGGAGTTGCTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWCWWWR*WSCWKH
Trigger: GTGCTTCCAGCAACTCCAGCAACGCCACCACCAGCA...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGTCTGGGACACGGAGCTaGTGTGCCCGTAGTGAGATG +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMSGTRS*CARSEM
Trigger: CATCTCACTACGGGCACAGCAGCTCCGTGTCCCAGA...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCTGTTCCAAGAGTCCTaGTTGGAGCTGGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSLFQES*LELVCG
Trigger: TCCACAGACCAGCTCCAAGCAGGACTCTTGGAACAG...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGGTGCTAGAAACACAATaGAAAACCCACGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAVLETQ*KTHGLG
Trigger: GCCTAGACCGTGGGTTTTGCATTGTGTTTCTAGCAC...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTACATGGCAAACAGATaGCGTCATTCGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNYMANR*RHSGWS
Trigger: GCTCCAGCCCGAATGACGGCATCTGTTTGCCATGTA...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGCTGTGGTGGGTTAAGTaGCCCTGTAGCTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMLWWVK*PCSSPG
Trigger: TCCTGGGGAGCTACAGGGGCACTTAACCCACCACAG...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACGGTGAACGAAGGGTCTaGAGTGAACTCGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNGERRV*SELEGV
Trigger: CACCCCCTCGAGTTCACTGCAGACCCTTCGTTCACC...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGCTGGGCTGAGTGCTTaGCAGACTGGCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQAGLSA*QTGLSS
Trigger: GCTGCTCAAGCCAGTCTGGCAAGCACTCAGCCCAGC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGGGGGAGCGGCGTCCCTaGGGCTGCTCAAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEGERRP*GCSRPG
Trigger: ACCAGGCCTTGAGCAGCCGCAGGGACGCCGCTCCCC...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGCAGCCGGGGTCCTGCTaGGCCTGGAGGTTCCGCGCA +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEQPGSC*AWRFRA
Trigger: TGCGCGGAACCTCCAGGCCCAGCAGGACCCCGGCTG...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGCGTGGTTGGCGGCCATaGCCAAGCTCTGATACATGG +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMRGWRP*PSSDTW
Trigger: CCATGTATCAGAGCTTGGCCATGGCCGCCAACCACG...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGCATTGCAAGAGGCCTaGGGACCCCGTGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQALQEA*GPRGAS
Trigger: TGAAGCTCCACGGGGTCCCCAGGCCTCTTGCAATGC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGCTGACTGAGAACGTCTaGGACACGGAGCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEELTENV*DTELLC
Trigger: GCACAGCAGCTCCGTGTCCCAGACGTTCTCAGTCAG...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACTGGATGGAGGGCCCATaGCCAGACATCGCACTGACT +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNWMEGP*PDIALT
Trigger: AGTCAGTGCGATGTCTGGCCATGGGCCCTCCATCCA...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGTGGATGGAGGGCCCATaGCCAGACATCGCACTGACT +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEEWMEGP*PDIALT
Trigger: AGTCAGTGCGATGTCTGGCCATGGGCCCTCCATCCA...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGTGGATGGAGGGCCCATaGCCAGACATCGCACTGACT +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPWMEGP*PDIALT
Trigger: AGTCAGTGCGATGTCTGGCCATGGGCCCTCCATCCA...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGAGACGCATAGCCTTGTaGGGAGAGCTTCAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWRRIAL*GELQGR
Trigger: TCGGCCCTGAAGCTCTCCCCACAAGGCTATGCGTCT...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGAGACGCATAGCCTTGTaGGGAGAGCTTCAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEERRIAL*GELQGR
Trigger: TCGGCCCTGAAGCTCTCCCCACAAGGCTATGCGTCT...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAAGGGGTCTGGGCGTGTaGGGAGGCGTAGTAATGCCA +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQRGLGV*GGVVMP
Trigger: TGGCATTACTACGCCTCCCCACACGCCCAGACCCCT...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTATTCACCCCAGGGCCTaGAGGTCCGGCGCACCTATT +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGIHPRA*RSGAPI
Trigger: AATAGGTGCGCCGGACCTTCAGGCCCTGGGGTGAAT...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR TCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTGCCATGGCCAAGCTCTaGTACATGGTCCCTGCGAGC +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGAMAKL*YMVPAS
Trigger: GCTCGCAGGGACCATGTATCAGAGCTTGGCCATGGC...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR TCA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGACACTCTCTGCCTTCTaGGAAGTCGTCAAACATATC +
Preference number: 4 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSATLSAF*EVVKHI
Trigger: GATATGTTTGACGACTTCTCAGAAGGCAGAGAGTGT...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGAGACATCGCACTGACTaGGAACGTCTGGGACACGGA +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMRHRTD*ERLGHG
Trigger: TCCGTGTCCCAGACGTTCTCAGTCAGTGCGATGTCT...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGAGACATCGCACTGACTaGGAACGTCTGGGACACGGA +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPRHRTD*ERLGHG
Trigger: TCCGTGTCCCAGACGTTCTCAGTCAGTGCGATGTCT...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAATCTGTGGAGACTGGCTaGCGGGAGACGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQSVETG*RETHSL
Trigger: AAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGA...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATGGGAAGATTACGCAGTaGTTATGTCCCCGTGACTGT +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNGKITQ*LCPRDC
Trigger: ACAGTCACGGGGACATAATCACTGCGTAATCTTCCC...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGTCCGTGCAGGAATTTaGGGAGGGAAGAGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIVRAGI*GGKRED
Trigger: ATCTTCCCTCTTCCCTCCTCAAATTCCTGCACGGAC...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATGCGTGTAAAGGCATCTaGGAAAATCCAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNACKGI*ENPTPA
Trigger: AGCGGGTGTTGGATTTTCTCAGATGCCTTTACACGC...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAAGGAAGGAGTCTCCTTaGGCTCCAGCATCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQRKESP*APASGA
Trigger: TGCCCCTGATGCTGGAGCTCAAGGAGACTCCTTCCT...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAATGCTGGTGGTGGCGTTaGTGGAGTTGCTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQCWWWR*WSCWKH
Trigger: GTGCTTCCAGCAACTCCAGCAACGCCACCACCAGCA...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCAGGGCCTCCTTCTTTaGTATCCTCCAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNQGLLL*YPPSPR
Trigger: CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTG...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTAACTCACAGGAGAGATaGAGTGTGCTCGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSNSQER*SVLVLK
Trigger: CTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTT...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTACATGGCAAACAGATaGCGTCATTCGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIYMANR*RHSGWS
Trigger: GCTCCAGCCCGAATGACGGCATCTGTTTGCCATGTA...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGACTGTGGTGGGTTAAGTaGCCCTGTAGCTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGLWWVK*PCSSPG
Trigger: TCCTGGGGAGCTACAGGGGCACTTAACCCACCACAG...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGGTGAACGAAGGGTCTaGAGTGAACTCGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQGERRV*SELEGV
Trigger: CACCCCCTCGAGTTCACTGCAGACCCTTCGTTCACC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTCGCCGAGAACCAGGGTaGAGAGCAGGATGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSRREPG*RAGCVP
Trigger: GGGGACGCATCCTGCTCTGCACCCTGGTTCTCGGCG...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGGTCCAGGCCTGGAGGTaGCGCACGAGCCTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEVQAWR*RTSLRV
Trigger: GACCCGAAGGCTCGTGCGCCACCTCCAGGCCTGGAC...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTGCATTGCAAGAGGCCTaGGGACCCCGTGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGALQEA*GPRGAS
Trigger: TGAAGCTCCACGGGGTCCCCAGGCCTCTTGCAATGC...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGTTCCGTTTTCTGGTTTaGATCCCCTCTTTCCGCATT +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEFRFLV*IPSFRI
Trigger: AATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAA...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGACTGACTGAGAACGTCTaGGACACGGAGCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGLTENV*DTELLC
Trigger: GCACAGCAGCTCCGTGTCCCAGACGTTCTCAGTCAG...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGAGGGCCCATaGCCAGACATCGCACTGACT +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGWMEGP*PDIALT
Trigger: AGTCAGTGCGATGTCTGGCCATGGGCCCTCCATCCA...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAAGACGCATAGCCTTGTaGGGAGAGCTTCAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQRRIAL*GELQGR
Trigger: TCGGCCCTGAAGCTCTCCCCACAAGGCTATGCGTCT...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTCATGCCTCAAGCGGATaGATGGGGCAAGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGHASSG*MGQGPV
Trigger: GACAGGCCCTTGCCCCATCCATCCGCTTGAGGCATG...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTGGTCCTGAGGGACTCTaGCTGCCATCTGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGGPEGL*LPSDQG
Trigger: CCCTTGGTCAGATGGCAGCCAGAGTCCCTCAGGACC...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAAAGGCTCTCACTGCCTaGAGGAGCTGCTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGKALTA*RSCWCL
Trigger: AAGACACCAGCAGCTCCTTCAGGCAGTGAGAGCCTT...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTTCTGTGGAGACTGGCTaGCGGGAGACGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGSVETG*RETHSL
Trigger: AAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGA...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTGTGATTATGTCCCCGTaGCTGTCGGCCAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGVIMSP*LSAKTR
Trigger: CCTGGTCTTGGCCGACAGTCACGGGGACATAATCAC...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGGGAAGATTACGCAGTaGTTATGTCCCCGTGACTGT +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIGKITQ*LCPRDC
Trigger: ACAGTCACGGGGACATAATCACTGCGTAATCTTCCC...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGGGGAAGATTACGCAGTaGTTATGTCCCCGTGACTGT +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWGKITQ*LCPRDC
Trigger: ACAGTCACGGGGACATAATCACTGCGTAATCTTCCC...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGCGTGTAAAGGCATCTaGGAAAATCCAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIACKGI*ENPTPA
Trigger: AGCGGGTGTTGGATTTTCTCAGATGCCTTTACACGC...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTAGGAAGGAGTCTCCTTaGGCTCCAGCATCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGRKESP*APASGA
Trigger: TGCCCCTGATGCTGGAGCTCAAGGAGACTCCTTCCT...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCTGTTCCAAGAGTCCTaGTTGGAGCTGGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNLFQES*LELVCG
Trigger: TCCACAGACCAGCTCCAAGCAGGACTCTTGGAACAG...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGCTGTTCCAAGAGTCCTaGTTGGAGCTGGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMLFQES*LELVCG
Trigger: TCCACAGACCAGCTCCAAGCAGGACTCTTGGAACAG...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGCTGTTCCAAGAGTCCTaGTTGGAGCTGGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWLFQES*LELVCG
Trigger: TCCACAGACCAGCTCCAAGCAGGACTCTTGGAACAG...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCAAGTCCCAGGTCCGTaGAGGAATTTGAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNQVPGP*RNLRRE
Trigger: TTCCCTCCTCAAATTCCTGCACGGACCTGGGACTTG...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGCAAGTCCCAGGTCCGTaGAGGAATTTGAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWQVPGP*RNLRRE
Trigger: TTCCCTCCTCAAATTCCTGCACGGACCTGGGACTTG...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACAGGGCCTCCTTCTTTaGTATCCTCCAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQQGLLL*YPPSPR
Trigger: CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTG...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACTACATGGCAAACAGATaGCGTCATTCGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNYMANR*RHSGWS
Trigger: GCTCCAGCCCGAATGACGGCATCTGTTTGCCATGTA...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGACCTGGGGGAGAAGTTaGCAGCTGCATTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWTWGRS*QLHFDE
Trigger: CTCATCAAAATGCAGCTGGCAACTTCTCCCCCAGGT...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACGCAGAAACAGCAATGTaGAGAGGAGAACGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNAETAM*RGERGR
Trigger: TCTGCCGCGTTCTCCTCTGCACATTGCTGTTTCTGC...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGGCAGAAACAGCAATGTaGAGAGGAGAACGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPAETAM*RGERGR
Trigger: TCTGCCGCGTTCTCCTCTGCACATTGCTGTTTCTGC...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGGCAGAAACAGCAATGTaGAGAGGAGAACGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWAETAM*RGERGR
Trigger: TCTGCCGCGTTCTCCTCTGCACATTGCTGTTTCTGC...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTCCCGCGCAGAACGAATaGCGAGTCCTGCAACACGGC +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSPAQNE*RVLQHG
Trigger: GCCGTGTTGCAGGACTCGGCATTCGTTCTGCGCGGG...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR GCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAATATGGACGCGCCTCTaGGGCCCTGCCGCGAGGGAT +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPIWTRL*GPAARD
Trigger: ATCCCTCGCGGCAGGGCCGCAGAGGCGCGTCCATAT...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAAAGCCGGGTAGGGGCTaGAGTAGGAGCCCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPKPGRG*SRSPRS
Trigger: GCTTCGCGGGCTCCTACTCCAGCCCCTACCCGGCTT...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000645330.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTCTTGGAGCTGGTCTGTaGAGACTGGCTGACGGGAGA +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGLGAGL*RLADGR
Trigger: TCTCCCGTCAGCCAGTCTCCACAGACCAGCTCCAAG...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGTCCAAGAGTCCTGCTTaGAGCTGGTCTGTGGAGACT +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWSKSPA*SWSVET
Trigger: AGTCTCCACAGACCAGCTCCAAGCAGGACTCTTGGA...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGTCCAAGAGTCCTGCTTaGAGCTGGTCTGTGGAGACT +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPSKSPA*SWSVET
Trigger: AGTCTCCACAGACCAGCTCCAAGCAGGACTCTTGGA...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTGCTCGTGCTGAAGGGTaGGCTCCCTCCAGTCCCATC +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSARAEG*APSSPI
Trigger: GATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGC...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGCTGCAACACGGCCCTTaGATTCCCCCGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLELQHGP*IPPLGL
Trigger: CAGGCCCAGCGGGGGAATCCAAGGGCCGTGTTGCAG...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR TCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTGTGCCCGTAGTGAGATaGCAGGCCAGGCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSVPVVR*QARLRL
Trigger: AAGACGGAGCCTGGCCTGTCATCTCACTACGGGCAC...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAGTCCGTGCAGGAATTTaGGGAGGGAAGAGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGVRAGI*GGKRED
Trigger: ATCTTCCCTCTTCCCTCCTCAAATTCCTGCACGGAC...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGGCGTGTAAAGGCATCTaGGAAAATCCAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEEACKGI*ENPTPA
Trigger: AGCGGGTGTTGGATTTTCTCAGATGCCTTTACACGC...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGGCAACAACGATAATATaGGTGGGAGGAACTGTCGCG +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPATTII*VGGTVA
Trigger: CGCGACAGTTCCTCCCACGCATATTATCGTTGTTGC...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR GCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTCTGATACATGGTCCCTaGGAGCTCCCGGCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSLIHGP*ELPASV
Trigger: CACCGAAGCCGGGAGCTCGCAGGGACCATGTATCAG...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR GCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGAACTCACAGGAGAGATaGAGTGTGCTCGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWNSQER*SVLVLK
Trigger: CTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTT...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGAACTCACAGGAGAGATaGAGTGTGCTCGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMNSQER*SVLVLK
Trigger: CTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTT...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGACCTGGGGGAGAAGTTaGCAGCTGCATTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWTWGRS*QLHFDE
Trigger: CTCATCAAAATGCAGCTGGCAACTTCTCCCCCAGGT...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGACCTGGGGGAGAAGTTaGCAGCTGCATTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMTWGRS*QLHFDE
Trigger: CTCATCAAAATGCAGCTGGCAACTTCTCCCCCAGGT...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTGCTGGGCTGAGTGCTTaGCAGACTGGCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSAGLSA*QTGLSS
Trigger: GCTGCTCAAGCCAGTCTGGCAAGCACTCAGCCCAGC...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTGTGTTGTGTTTGTTTaGTTCGAATTCGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVCVVFV*FEFVLQ
Trigger: CTGCAACACGAATTCGAAGCAAACAAACACAACACA...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGCAGAAGCTGCTAGGCTaGCTCCTTCCTCCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEQKLLG*LLPPRR
Trigger: GCGGCGAGGAGGAAGGAGCCAGCCTAGCAGCTTCTG...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTCCGTTTTCTGGTTTaGATCCCCTCTTTCCGCATT +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNFRFLV*IPSFRI
Trigger: AATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAA...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTTTCCGTTTTCTGGTTTaGATCCCCTCTTTCCGCATT +
Preference number: 4 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSFRFLV*IPSFRI
Trigger: AATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAA...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGTGGGCTTCCGTTTTCTaGTTTGGATCCCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWWASVF*FGSPLS
Trigger: GGAAAGAGGGGATCCAAACCAGAAAACGGAAGCCCA...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTATTTATTCAGGTTCTTaGGCTTCCGTTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSIYSGS*ASVFWF
Trigger: AAACCAGAAAACGGAAGCCCAAGAACCTGAATAAAT...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCATGCTGGAAGCACCGCTaGCGGGAGGAAGGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPCWKHR*REEGSH
Trigger: GTGAGAGCCTTCCTCCCGCCAGCGGTGCTTCCAGCA...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTGGTGGTGGCGTTGCTaGAGTTGCTGGAAGCACCGC +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSWWWRC*SCWKHR
Trigger: GCGGTGCTTCCAGCAACTCCAGCAACGCCACCACCA...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTCTCCTCGCTGCTGCTaGTGGTGGCGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSSPRCC*WWRCWS
Trigger: ACTCCAGCAACGCCACCACCAGCAGCAGCGAGGAGA...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTAGAGGACAGGGTGGATaGAGGGCCCATGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSRGQGG*RAHGQT
Trigger: TGTCTGGCCATGGGCCCTCCATCCACCCTGTCCTCT...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTCCCAGTTGTTGTTCTaGAGTCATTACCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGISQLLF*SHYQAE
Trigger: CTCTGCCTGGTAATGACTCCAGAACAACAACTGGGA...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGTCCCAGTTGTTGTTCTaGAGTCATTACCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWSQLLF*SHYQAE
Trigger: CTCTGCCTGGTAATGACTCCAGAACAACAACTGGGA...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATCGGAAAATCCCAATTTaGATTTTTGGTGGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: EPRASFFAILQVPGPCRNRKIPI*IFGGSG
Trigger: TCCGGAACCACCAAAAATTCAAATTGGGATTTTCCG...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR TCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGCCATGGCCAAGCTCTaGTACATGGTCCCTGCGAGC +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPAMAKL*YMVPAS
Trigger: GCTCGCAGGGACCATGTATCAGAGCTTGGCCATGGC...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR TCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGGTGCCCGTAGTGAGATaGCAGGCCAGGCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEVPVVR*QARLRL
Trigger: AAGACGGAGCCTGGCCTGTCATCTCACTACGGGCAC...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTGGCCAGACATCGCACTaGCTGAGAACGTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSGQTSH*LRTSGT
Trigger: TGTCCCAGACGTTCTCAGTCAGTGCGATGTCTGGCC...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGGGAAGATTACGCAGTaGTTATGTCCCCGTGACTGT +
Preference number: 4 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQGKITQ*LCPRDC
Trigger: ACAGTCACGGGGACATAATCACTGCGTAATCTTCCC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAGCGTGTAAAGGCATCTaGGAAAATCCAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGACKGI*ENPTPA
Trigger: AGCGGGTGTTGGATTTTCTCAGATGCCTTTACACGC...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGACGAAGGGTCTGCAGTaGACTCGAGGGGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLETKGLQ*TRGGAV
Trigger: AACGGCACCCCCTCGAGTTCACTGCAGACCCTTCGT...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTCTGTTCCAAGAGTCCTaGTTGGAGCTGGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGLFQES*LELVCG
Trigger: TCCACAGACCAGCTCCAAGCAGGACTCTTGGAACAG...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTCAAGTCCCAGGTCCGTaGAGGAATTTGAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGQVPGP*RNLRRE
Trigger: TTCCCTCCTCAAATTCCTGCACGGACCTGGGACTTG...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGTGCTAGAAACACAATaGAAAACCCACGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMVLETQ*KTHGLG
Trigger: GCCTAGACCGTGGGTTTTGCATTGTGTTTCTAGCAC...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTGGTGAACGAAGGGTCTaGAGTGAACTCGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSGERRV*SELEGV
Trigger: CACCCCCTCGAGTTCACTGCAGACCCTTCGTTCACC...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCATGGTGGTCTGGCAGTTaGCACAGGAGAGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPWWSGS*HRRGPL
Trigger: GAGTGGGCCTCTCCTGTGCCAACTGCCAGACCACCA...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGGCATTGCAAGAGGCCTaGGGACCCCGTGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEALQEA*GPRGAS
Trigger: TGAAGCTCCACGGGGTCCCCAGGCCTCTTGCAATGC...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGATTTATTCAGGTTCTTaGGCTTCCGTTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: EMQCARAEGWAPSSPISVIYSGS*ASVFWF
Trigger: AAACCAGAAAACGGAAGCCCAAGAACCTGAATAAAT...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGATTTATTCAGGTTCTTaGGCTTCCGTTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEIYSGS*ASVFWF
Trigger: AAACCAGAAAACGGAAGCCCAAGAACCTGAATAAAT...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAAGAGGACAGGGTGGATaGAGGGCCCATGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPRGQGG*RAHGQT
Trigger: TGTCTGGCCATGGGCCCTCCATCCACCCTGTCCTCT...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGCATGCCTCAAGCGGATaGATGGGGCAAGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEHASSG*MGQGPV
Trigger: GACAGGCCCTTGCCCCATCCATCCGCTTGAGGCATG...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGAGGGGTCTGGGCGTGTaGGGAGGCGTAGTAATGCCA +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLERGLGV*GGVVMP
Trigger: TGGCATTACTACGCCTCCCCACACGCCCAGACCCCT...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGACACTCTCTGCCTTCTaGGAAGTCGTCAAACATATC +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPTLSAF*EVVKHI
Trigger: GATATGTTTGACGACTTCTCAGAAGGCAGAGAGTGT...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGACACTCTCTGCCTTCTaGGAAGTCGTCAAACATATC +
Preference number: 4 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWTLSAF*EVVKHI
Trigger: GATATGTTTGACGACTTCTCAGAAGGCAGAGAGTGT...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGGGCCAGACATCGCACTaGCTGAGAACGTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEGQTSH*LRTSGT
Trigger: TGTCCCAGACGTTCTCAGTCAGTGCGATGTCTGGCC...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCATCTGTGGAGACTGGCTaGCGGGAGACGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPSVETG*RETHSL
Trigger: AAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGA...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTGAACCCCTCTATGTGTaGCACGGTGAACGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSEPLYV*HGERRV
Trigger: GACCCTTCGTTCACCGTGTCACACATAGAGGGGTTC...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAAGGAAGGAGTCTCCTTaGGCTCCAGCATCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPRKESP*APASGA
Trigger: TGCCCCTGATGCTGGAGCTCAAGGAGACTCCTTCCT...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTGCAACAACGATAATATaGGTGGGAGGAACTGTCGCG +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGATTII*VGGTVA
Trigger: CGCGACAGTTCCTCCCACGCATATTATCGTTGTTGC...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR GCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCATGCTGGTGGTGGCGTTaGTGGAGTTGCTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPCWWWR*WSCWKH
Trigger: GTGCTTCCAGCAACTCCAGCAACGCCACCACCAGCA...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAGTGCTAGAAACACAATaGAAAACCCACGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGVLETQ*KTHGLG
Trigger: GCCTAGACCGTGGGTTTTGCATTGTGTTTCTAGCAC...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGTTCCGTTTTCTGGTTTaGATCCCCTCTTTCCGCATT +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPFRFLV*IPSFRI
Trigger: AATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAA...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTAATTCCTCCAAGATATaGACGCGCCTCTGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSNSSKI*TRLCGP
Trigger: AGGGCCGCAGAGGCGCGTCCATATCTTGGAGGAATT...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGTATCTACTCATTCTATaGAACGAATTCCTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEYLLIL*NEFLQD
Trigger: ATCTTGGAGGAATTCGTTCCATAGAATGAGTAGATA...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR TCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGAACCCCTCTATGTGTaGCACGGTGAACGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPEPLYV*HGERRV
Trigger: GACCCTTCGTTCACCGTGTCACACATAGAGGGGTTC...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTACATGGCAAACAGATaGCGTCATTCGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSYMANR*RHSGWS
Trigger: GCTCCAGCCCGAATGACGGCATCTGTTTGCCATGTA...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGACGAATGCCGAGTCCTaGAACACGGCCCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLETNAES*NTALGF
Trigger: GAATCCAAGGGCCGTGTTGCAGGACTCGGCATTCGT...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTCCAAGAGTCCTGCTTaGAGCTGGTCTGTGGAGACT +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSSKSPA*SWSVET
Trigger: AGTCTCCACAGACCAGCTCCAAGCAGGACTCTTGGA...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTTCCCAGTTGTTGTTCTaGAGTCATTACCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGSQLLF*SHYQAE
Trigger: CTCTGCCTGGTAATGACTCCAGAACAACAACTGGGA...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGGTCCGTGCAGGAATTTaGGGAGGGAAGAGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEVRAGI*GGKRED
Trigger: ATCTTCCCTCTTCCCTCCTCAAATTCCTGCACGGAC...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACTGTGTTGTGTTTGTTTaGTTCGAATTCGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ARPSACSQILGARNTMQNCVVFV*FEFVLQ
Trigger: CTGCAACACGAATTCGAAGCAAACAAACACAACACA...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGTGTGTTGTGTTTGTTTaGTTCGAATTCGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMCVVFV*FEFVLQ
Trigger: CTGCAACACGAATTCGAAGCAAACAAACACAACACA...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGTGTGTTGTGTTTGTTTaGTTCGAATTCGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEECVVFV*FEFVLQ
Trigger: CTGCAACACGAATTCGAAGCAAACAAACACAACACA...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGCAGAAACAGCAATGTaGAGAGGAGAACGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPAETAM*RGERGR
Trigger: TCTGCCGCGTTCTCCTCTGCACATTGCTGTTTCTGC...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGGGGAAGATTACGCAGTaGTTATGTCCCCGTGACTGT +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEGKITQ*LCPRDC
Trigger: ACAGTCACGGGGACATAATCACTGCGTAATCTTCCC...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGCAACAACGATAATATaGGTGGGAGGAACTGTCGCG +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPATTII*VGGTVA
Trigger: CGCGACAGTTCCTCCCACGCATATTATCGTTGTTGC...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR GCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGAACTCACAGGAGAGATaGAGTGTGCTCGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLENSQER*SVLVLK
Trigger: CTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTT...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCATGGGCTTCCGTTTTCTaGTTTGGATCCCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPWASVF*FGSPLS
Trigger: GGAAAGAGGGGATCCAAACCAGAAAACGGAAGCCCA...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGATTTATTCAGGTTCTTaGGCTTCCGTTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPIYSGS*ASVFWF
Trigger: AAACCAGAAAACGGAAGCCCAAGAACCTGAATAAAT...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTACACTCTCTGCCTTCTaGGAAGTCGTCAAACATATC +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSTLSAF*EVVKHI
Trigger: GATATGTTTGACGACTTCTCAGAAGGCAGAGAGTGT...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR GCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGGTGCTAGAAACACAATaGAAAACCCACGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEVLETQ*KTHGLG
Trigger: GCCTAGACCGTGGGTTTTGCATTGTGTTTCTAGCAC...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAATTTATTCAGGTTCTTaGGCTTCCGTTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGIYSGS*ASVFWF
Trigger: AAACCAGAAAACGGAAGCCCAAGAACCTGAATAAAT...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGTCCCAGTTGTTGTTCTaGAGTCATTACCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLESQLLF*SHYQAE
Trigger: CTCTGCCTGGTAATGACTCCAGAACAACAACTGGGA...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR CAA 72 bp TCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATaGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: SEKIQHPLPLTR*STSSFFPVVVL
Trigger: CAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000622443.2
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR TCA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCACGGAAAATCCCAATTTaGATTTTTGGTGGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPRKIPI*IFGGSG
Trigger: TCCGGAACCACCAAAAATTCAAATTGGGATTTTCCG...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR GCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTGTGTTGTGTTTGTTTaGTTCGAATTCGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSCVVFV*FEFVLQ
Trigger: CTGCAACACGAATTCGAAGCAAACAAACACAACACA...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTATTTATTCAGGTTCTTaGGCTTCCGTTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSIYSGS*ASVFWF
Trigger: AAACCAGAAAACGGAAGCCCAAGAACCTGAATAAAT...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
3UTR CAA 72 bp CTTAGCAGTCGTCTTCTTTCCAGGAATTCTGTTGTGTaGTGTTTGTTTGCTTCGAATTCGTGTTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: LSSRLLSRNSVV*CLFASNSCCRI
Trigger: GATTCTGCAACACGAATTCGAAGCAAACAAACACAACACAACAGAATTCCTGGAAAGAAGACGACTGCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CCA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGTATCTACTCATTCTATaGAACGAATTCCTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEYLLIL*NEFLQD
Trigger: ATCTTGGAGGAATTCGTTCCATAGAATGAGTAGATA...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS CCA 90 bp AGGCCTCCAGGACACCCGCGGCCACAGGCGCAGAAGCTGCTAGGCTaGCTCCTTCCTCCTCGCCGCAGCCGGGGTCCTGCTGGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: RPPGHPRPQAQKLLG*LLPPRRSRGPAGPG
Trigger: TCCAGGCCCAGCAGGACCCCGGCTGCGGCGAGGAGGAAGGAGCCAGCCTAGCAGCTTCTGCGCCTGTGGCCGCGGGTGTCCTGGAGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS CCA 90 bp CGGCGCACCTATTGGGGGCAGAAGACGGAGGGCAGCGTCCAGGCCTaGAGGTGGCGCACGAGCCTTCGGGTCCCCCACTCGTCACACCGA +
Preference number: 5 (lower is better)
Translates to: RRTYWGQKTEGSVQA*RWRTSLRVPHSSHR
Trigger: TCGGTGTGACGAGTGGGGGACCCGAAGGCTCGTGCGCCACCTCCAGGCCTGGACGCTGCCCTCCGTCTTCTGCCCCCAATAGGTGCGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335135.8
ENST00000526974.1
ENST00000532059.6
ENST00000532977.1
ENST00000622443.3
ENST00000642753.1
ENST00000644275.1
ENST00000646425.1
ENST00000647274.1
CDS CCA 90 bp ACCTATTGGGGGCAGAAGACGGAGGGCAGCGTCCAGGCCTGGAGGTaGCGCACGAGCCTTCGGGTCCCCCACTCGTCACACCGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: TYWGQKTEGSVQAWR*RTSLRVPHSSHREA
Trigger: GGCCTCTCGGTGTGACGAGTGGGGGACCCGAAGGCTCGTGCGCCACCTCCAGGCCTGGACGCTGCCCTCCGTCTTCTGCCCCCAATAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335135.8
ENST00000526974.1
ENST00000532059.6
ENST00000532977.1
ENST00000622443.3
ENST00000642753.1
ENST00000644275.1
ENST00000646425.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGGGCCCGGCCCTCCGCTaGTTCTCAGATCCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRGPALR*FSDPRC
Trigger: GCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCC...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS GCA 90 bp CAGAGCAGGATGCGTCCCCGCGGTGGGGAGCGGCGTCCCTGCGGCTaGTCAAGGCCTGGTGTGAGGCAAACTCTGCACAGGGATTCCAGG +
Preference number: 5 (lower is better)
Translates to: QSRMRPRGGERRPCG*SRPGVRQTLHRDSR
Trigger: CCTGGAATCCCTGTGCAGAGTTTGCCTCACACCAGGCCTTGAGCAGCCGCAGGGACGCCGCTCCCCACCGCGGGGACGCATCCTGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000646696.1
CDS-3UTR CAA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGGTGGCGTTGCTGGAGTaGCTGGAAGCACCGCTGGCG +
Preference number: 5 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRVALLE*LEAPLA
Trigger: CGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCAC...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS TCA 90 bp CGCCTCTGCGGCCCTGCCGCGAGGGATCCGGACAGACATTCAAGGTaGCCCGCGCAGAACGAATGCCGAGTCCTGCAACACGGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: RLCGPAARDPDRHSR*PAQNECRVLQHGPW
Trigger: CCAAGGGCCGTGTTGCAGGACTCGGCATTCGTTCTGCGCGGGTCACCTTGAATGTCTGTCCGGATCCCTCGCGGCAGGGCCGCAGAGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS GCA 90 bp CGGACAGACATTCAAGGTGACCCGCGCAGAACGAATGCCGAGTCCTaGAACACGGCCCTTGGATTCCCCCGCTGGGCCTGGGCGCCGGTC +
Preference number: 5 (lower is better)
Translates to: RTDIQGDPRRTNAES*NTALGFPRWAWAPV
Trigger: GACCGGCGCCCAGGCCCAGCGGGGGAATCCAAGGGCCGTGTTGCAGGACTCGGCATTCGTTCTGCGCGGGTCACCTTGAATGTCTGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS CCA 90 bp AGAACGAATGCCGAGTCCTGCAACACGGCCCTTGGATTCCCCCGCTaGGCCTGGGCGCCGGTCTGCGATACTCCTTCCCTGCGCGGCACT +
Preference number: 5 (lower is better)
Translates to: RTNAESCNTALGFPR*AWAPVCDTPSLRGT
Trigger: AGTGCCGCGCAGGGAAGGAGTATCGCAGACCGGCGCCCAGGCCCAGCGGGGGAATCCAAGGGCCGTGTTGCAGGACTCGGCATTCGTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS CCA 90 bp AGGCCTCCAGGACACCCGCGGCCACAGGCGCAGAAGCTGCTAGGCTaGCTCCTTCCTCCTCGCCGCAGCCGGGGTCCTCATTCTATGGAA +
Preference number: 5 (lower is better)
Translates to: RPPGHPRPQAQKLLG*LLPPRRSRGPHSME
Trigger: TTCCATAGAATGAGGACCCCGGCTGCGGCGAGGAGGAAGGAGCCAGCCTAGCAGCTTCTGCGCCTGTGGCCGCGGGTGTCCTGGAGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526974.1
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
CDS-3UTR CAA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTGGTCCGGCGCACCTATaGGGGGCAGAAGACGGAGGG +
Preference number: 5 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSGPAHL*GAEDGG
Trigger: CCCTCCGTCTTCTGCCCCCAATAGGTGCGCCGGACC...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCCCTCTTTCCGCATaGCAAGAGGCCTGGGGACCC +
Preference number: 5 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRSPLSA*QEAWGP
Trigger: GGGTCCCCAGGCCTCTTGCAATGCGGAAAGAGGGGA...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAGTGGCGTTGCTGGAGTaGCTGGAAGCACCGCTGGCG +
Preference number: 5 (lower is better)
Translates to: SRGPRARPSACSQILGARVALLE*LEAPLA
Trigger: CGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCAC...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS GCA 90 bp CGGCCCGTGGTTGGCGGCCATGGCCAAGCTCTGATACATGGTCCCTaGGAGCTCCCGGCTTCGGTGTCCTCTCTCTCCCTCGCAGGTCAA +
Preference number: 5 (lower is better)
Translates to: RPVVGGHGQALIHGP*ELPASVSSLSLAGQ
Trigger: TTGACCTGCGAGGGAGAGAGAGGACACCGAAGCCGGGAGCTCGCAGGGACCATGTATCAGAGCTTGGCCATGGCCGCCAACCACGGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526974.1
ENST00000532059.6
ENST00000532977.1
ENST00000622443.3
ENST00000642753.1
ENST00000643249.3
ENST00000644275.1
ENST00000646425.1
ENST00000647274.1
CDS CCA 90 bp GGAGCTGGTCTGTGGAGACTGGCTGACGGGAGACGCATAGCCTTGTaGGGAGAGCTTCAGGGCCGAGAGGACAGGGTGGATGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: GAGLWRLADGRRIAL*GELQGREDRVDGGP
Trigger: GGGCCCTCCATCCACCCTGTCCTCTCGGCCCTGAAGCTCTCCCCACAAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGACCAGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGGGTCCGGCGCACCTATaGGGGGCAGAAGACGGAGGG +
Preference number: 5 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAGPAHL*GAEDGG
Trigger: CCCTCCGTCTTCTGCCCCCAATAGGTGCGCCGGACC...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CAA 90 bp AGCAGGGGTCCCAGGGCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGATCCCCTCTTTCCGCATaGCAAGAGGCCTGGGGACCC +
Preference number: 5 (lower is better)
Translates to: SRGPRARPSACSQILGARSPLSA*QEAWGP
Trigger: GGGTCCCCAGGCCTCTTGCAATGCGGAAAGAGGGGA...TCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGGGCCCGGCCCTCCGCTaGTTCTCAGATCCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAGPALR*FSDPRC
Trigger: GCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCC...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGGGCCCGGCCCTCCGCTaGTTCTCAGATCCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: EMQCARAEGWAPSSPISVGPALR*FSDPRC
Trigger: GCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCC...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS TCA 90 bp CGGAGCTGCTGTGCCCGTAGTGAGATGACAGGCCAGGCTCCGTCTTaGTGGGACGCATCTCCTCGCTGCTGCTGGTGGTGGCGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: RSCCARSEMTGQAPS*WDASPRCCWWWRCW
Trigger: CCAGCAACGCCACCACCAGCAGCAGCGAGGAGATGCGTCCCATCAAGACGGAGCCTGGCCTGTCATCTCACTACGGGCACAGCAGCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000526716.5
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000642612.1
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS CCA 90 bp GGGGAGAGCTTCAGGGCCGAGAGGACAGGGTGGATGGAGGGCCCATaGCCAGACATCGCACTGACTGAGAACGTCTGGGACACGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GESFRAERTGWMEGP*PDIALTENVWDTEL
Trigger: CAGCTCCGTGTCCCAGACGTTCTCAGTCAGTGCGATGTCTGGCCATGGGCCCTCCATCCACCCTGTCCTCTCGGCCCTGAAGCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGGTGGCGTTGCTGGAGTaGCTGGAAGCACCGCTGGCG +
Preference number: 5 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEVALLE*LEAPLA
Trigger: CGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCAC...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTGGGAGACGCATAGCCTaGTGGGGAGAGCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSGRRIA*WGELQG
Trigger: GCCCTGAAGCTCTCCCCACAAGGCTATGCGTCTCCC...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGCCAGGGCCTCCTTCTTaGCTATCCTCCAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GRPLGAQGLLLCYPPSPRPGPPS*LSSKSQ
Trigger: CTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGG...CCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTGGCTGGGCTGAGTGCTaGCCAGACTGGCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSGWAEC*PDWLEQ
Trigger: CTGCTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCC...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGGTGGTGGTCTGGCAGTaGGCACAGGAGAGGCCCACT +
Preference number: 5 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEVVVWQ*AQERPT
Trigger: AGTGGGCCTCTCCTGTGCCAACTGCCAGACCACCAC...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGGTGGTGGTCTGGCAGTaGGCACAGGAGAGGCCCACT +
Preference number: 5 (lower is better)
Translates to: EMQCARAEGWAPSSPISVVVVWQ*AQERPT
Trigger: AGTGGGCCTCTCCTGTGCCAACTGCCAGACCACCAC...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTCCCCTCTTTCCGCATaGCAAGAGGCCTGGGGACCC +
Preference number: 5 (lower is better)
Translates to: EMQCARAEGWAPSSPISVSPLSA*QEAWGP
Trigger: GGGTCCCCAGGCCTCTTGCAATGCGGAAAGAGGGGA...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTCCCCTCTTTCCGCATaGCAAGAGGCCTGGGGACCC +
Preference number: 5 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSASPLSA*QEAWGP
Trigger: GGGTCCCCAGGCCTCTTGCAATGCGGAAAGAGGGGA...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGGGCTGGGCTGAGTGCTaGCCAGACTGGCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: EMQCARAEGWAPSSPISVGWAEC*PDWLEQ
Trigger: CTGCTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCC...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTGAGGAAGGAGTCTCCTaGAGCTCCAGCATCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSEEGVS*SSSIRG
Trigger: GCCCCTGATGCTGGAGCTCAAGGAGACTCCTTCCTC...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS CCA 90 bp CCGCAGCCGGGGTCCTCATTCTATGGAACGAATTCCTCCAAGATATaGACGCGCCTCTGCGGCCCTGCCGCGAGGGATCCGGACAGACAT +
Preference number: 5 (lower is better)
Translates to: PQPGSSFYGTNSSKI*TRLCGPAARDPDRH
Trigger: ATGTCTGTCCGGATCCCTCGCGGCAGGGCCGCAGAGGCGCGTCCATATCTTGGAGGAATTCGTTCCATAGAATGAGGACCCCGGCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526974.1
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
CDS-3UTR CAA 90 bp GAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTCAAACATATCGAGATaGGGGTGTCGGGCGGCCGGG +
Preference number: 5 (lower is better)
Translates to: EMQCARAEGWAPSSPISVSNISR*GCRAAG
Trigger: CCCGGCCGCCCGACACCCCAATCTCGATATGTTTGA...CACGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000645330.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTCAAACATATCGAGATaGGGGTGTCGGGCGGCCGGG +
Preference number: 5 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSASNISR*GCRAAG
Trigger: CCCGGCCGCCCGACACCCCAATCTCGATATGTTTGA...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000645330.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATGTGGCGTTGCTGGAGTaGCTGGAAGCACCGCTGGCG +
Preference number: 5 (lower is better)
Translates to: EPRASFFAILQVPGPCRNVALLE*LEAPLA
Trigger: CGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCAC...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTGTGGCGTTGCTGGAGTaGCTGGAAGCACCGCTGGCG +
Preference number: 5 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSVALLE*LEAPLA
Trigger: CGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCAC...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGCCTGCAACACGGCCCTaGGATTCCCCCGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWPATRP*DSPAGP
Trigger: AGGCCCAGCGGGGGAATCCAAGGGCCGTGTTGCAGG...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS TCA 90 bp GGCTGTTCCAAGAGTCCTGCTTGGAGCTGGTCTGTGGAGACTGGCTaGCGGGAGACGCATAGCCTTGTGGGGAGAGCTTCAGGGCCGAGA +
Preference number: 5 (lower is better)
Translates to: GCSKSPAWSWSVETG*RETHSLVGRASGPR
Trigger: TCTCGGCCCTGAAGCTCTCCCCACAAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGACCAGCTCCAAGCAGGACTCTTGGAACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTGGGAGACGCATAGCCTaGTGGGGAGAGCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSGRRIA*WGELQG
Trigger: GCCCTGAAGCTCTCCCCACAAGGCTATGCGTCTCCC...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGCCAGGGCCTCCTTCTTaGCTATCCTCCAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSAPGPPS*LSSKSQ
Trigger: CTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGG...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGCCTGCAACACGGCCCTaGGATTCCCCCGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWPATRP*DSPAGP
Trigger: AGGCCCAGCGGGGGAATCCAAGGGCCGTGTTGCAGG...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS GCA 90 bp CTATGGAACGAATTCCTCCAAGATATGGACGCGCCTCTGCGGCCCTaGCGCGAGGGATCCGGACAGACATTCAAGGTGACCCGCGCAGAA +
Preference number: 5 (lower is better)
Translates to: LWNEFLQDMDAPLRP*REGSGQTFKVTRAE
Trigger: TTCTGCGCGGGTCACCTTGAATGTCTGTCCGGATCCCTCGCGGCAGGGCCGCAGAGGCGCGTCCATATCTTGGAGGAATTCGTTCCATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS CCA 90 bp GGCCAAGACCAGGCTGTTCCAAGAGTCCTGCTTGGAGCTGGTCTGTaGAGACTGGCTGACGGGAGACGCATAGCCTTGTGGGGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: GQDQAVPRVLLGAGL*RLADGRRIALWGEL
Trigger: AAGCTCTCCCCACAAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGACCAGCTCCAAGCAGGACTCTTGGAACAGCCTGGTCTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS CCA 90 bp CGGCAGGGACAAACGAACAGCCGGCAGCCTGCGAGACAGCCGGGATaGGTGCAAGCTAATGGCTTTATCTACATTTGCCGGGGACAGCAG +
Preference number: 5 (lower is better)
Translates to: RQGQTNSRQPARQPG*VQANGFIYICRGQQ
Trigger: CTGCTGTCCCCGGCAAATGTAGATAAAGCCATTAGCTTGCACCCATCCCGGCTGTCTCGCAGGCTGCCGGCTGTTCGTTTGTCCCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526021.1
ENST00000647218.1
CDS-3UTR CAA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAGGTCCGGCGCACCTATaGGGGGCAGAAGACGGAGGG +
Preference number: 5 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGGPAHL*GAEDGG
Trigger: CCCTCCGTCTTCTGCCCCCAATAGGTGCGCCGGACC...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CAA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGGTGGCGTTGCTGGAGTaGCTGGAAGCACCGCTGGCG +
Preference number: 5 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWVALLE*LEAPLA
Trigger: CGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCAC...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGGGGAGACGCATAGCCTaGTGGGGAGAGCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: GVRFGIRDAGRCHASSGWGRRIA*WGELQG
Trigger: GCCCTGAAGCTCTCCCCACAAGGCTATGCGTCTCCC...CCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGGCCCGGCCCTCCGCTaGTTCTCAGATCCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQGPALR*FSDPRC
Trigger: GCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTAAGGGCTCTAGGCTCTaGTTTACTCCGGAAAATCCC +
Preference number: 5 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSKGSRL*FTPENP
Trigger: GGGATTTTCCGGAGTAAACAAGAGCCTAGAGCCCTT...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CAA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACGTGGTGGTCTGGCAGTaGGCACAGGAGAGGCCCACT +
Preference number: 5 (lower is better)
Translates to: ARPSACSQILGARNTMQNVVVWQ*AQERPT
Trigger: AGTGGGCCTCTCCTGTGCCAACTGCCAGACCACCAC...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGTCCCCTCTTTCCGCATaGCAAGAGGCCTGGGGACCC +
Preference number: 5 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPSPLSA*QEAWGP
Trigger: GGGTCCCCAGGCCTCTTGCAATGCGGAAAGAGGGGA...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCTTCCGTTTTCTGGTTaGGATCCCCTCTTTCCGCAT +
Preference number: 5 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSLPFSG*DPLFPH
Trigger: ATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAAG...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGAGGCCAGGCTCCGTCTaGATGGGACGCATCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPRPGSV*MGRISS
Trigger: CGAGGAGATGCGTCCCATCAAGACGGAGCCTGGCCT...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGAGGCCAGGCTCCGTCTaGATGGGACGCATCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEERPGSV*MGRISS
Trigger: CGAGGAGATGCGTCCCATCAAGACGGAGCCTGGCCT...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGAGGCCAGGCTCCGTCTaGATGGGACGCATCTCCTCG +
Preference number: 5 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMRPGSV*MGRISS
Trigger: CGAGGAGATGCGTCCCATCAAGACGGAGCCTGGCCT...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGAGGCCAGGCTCCGTCTaGATGGGACGCATCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWRPGSV*MGRISS
Trigger: CGAGGAGATGCGTCCCATCAAGACGGAGCCTGGCCT...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGGGGAGACGCATAGCCTaGTGGGGAGAGCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWGRRIA*WGELQG
Trigger: GCCCTGAAGCTCTCCCCACAAGGCTATGCGTCTCCC...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTGGCCCGGCCCTCCGCTaGTTCTCAGATCCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGGPALR*FSDPRC
Trigger: GCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCC...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGGGCTGGGCTGAGTGCTaGCCAGACTGGCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEEGWAEC*PDWLEQ
Trigger: CTGCTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCC...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTGAGGAAGGAGTCTCCTaGAGCTCCAGCATCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SPGPPSLLSSKSQVRAGIEEGVS*SSSIRG
Trigger: GCCCCTGATGCTGGAGCTCAAGGAGACTCCTTCCTC...AATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS GCA 90 bp AGGGACAAACGAACAGCCGGCAGCCTGCGAGACAGCCGGGATGGGTaGAAGCTAATGGCTTTATCTACATTTGCCGGGGACAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: RDKRTAGSLRDSRDG*KLMALSTFAGDSSR
Trigger: TCTGCTGCTGTCCCCGGCAAATGTAGATAAAGCCATTAGCTTGCACCCATCCCGGCTGTCTCGCAGGCTGCCGGCTGTTCGTTTGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526021.1
ENST00000647218.1
CDS-3UTR CAA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGTGGTGGTCTGGCAGTaGGCACAGGAGAGGCCCACT +
Preference number: 5 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQVVVWQ*AQERPT
Trigger: AGTGGGCCTCTCCTGTGCCAACTGCCAGACCACCAC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAAGGCCAGGCTCCGTCTaGATGGGACGCATCTCCTCG +
Preference number: 5 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGRPGSV*MGRISS
Trigger: CGAGGAGATGCGTCCCATCAAGACGGAGCCTGGCCT...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGGGAGACGCATAGCCTaGTGGGGAGAGCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQGRRIA*WGELQG
Trigger: GCCCTGAAGCTCTCCCCACAAGGCTATGCGTCTCCC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGGCTGGGCTGAGTGCTaGCCAGACTGGCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQGWAEC*PDWLEQ
Trigger: CTGCTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGGAGGAAGGAGTCTCCTaGAGCTCCAGCATCAGGGGC +
Preference number: 5 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPEEGVS*SSSIRG
Trigger: GCCCCTGATGCTGGAGCTCAAGGAGACTCCTTCCTC...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGAACATATCTACGAGATaGGGGTGTCGGGCGGCCGGG +
Preference number: 5 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPNISTR*GCRAAG
Trigger: CCCGGCCGCCCGACACCCCAATCTCGTAGATATGTT...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532059.6
CDS GCA 90 bp GCGAGACAGCCGGGATGGGTGCAAGCTAATGGCTTTATCTACATTTaGCGGGGACAGCAGCAGAGGTCCTTATCTGCGGAGGGCTACAGT +
Preference number: 5 (lower is better)
Translates to: ARQPGWVQANGFIYI*RGQQQRSLSAEGYS
Trigger: ACTGTAGCCCTCCGCAGATAAGGACCTCTGCTGCTGTCCCCGGCAAATGTAGATAAAGCCATTAGCTTGCACCCATCCCGGCTGTCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526021.1
ENST00000647218.1
CDS-3UTR CAA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCGGAAAATCCCAATTaGAATTTTTGGTGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSPENPN*NFWWFR
Trigger: CCGGAACCACCAAAAATTCAAATTGGGATTTTCCGG...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CAA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTTCCCCTCTTTCCGCATaGCAAGAGGCCTGGGGACCC +
Preference number: 5 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGSPLSA*QEAWGP
Trigger: GGGTCCCCAGGCCTCTTGCAATGCGGAAAGAGGGGA...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCTTCCCCTAACCAGATaGTCGACTTCAAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSLPLTR*STSSFF
Trigger: GAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTGGCCCGGCCCTCCGCTaGTTCTCAGATCCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSGPALR*FSDPRC
Trigger: GCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGCC...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS CCA 90 bp GCAGCAGAGGTCCTTATCTGCGGAGGGCTACAGTTCTCACAGGGATaGCTTCTTCCCCCTATCTCATCTCAAACCCTTGAGGCCACGTGT +
Preference number: 5 (lower is better)
Translates to: AAEVLICGGLQFSQG*LLPPISSQTLEATC
Trigger: ACACGTGGCCTCAAGGGTTTGAGATGAGATAGGGGGAAGAAGCCATCCCTGTGAGAACTGTAGCCCTCCGCAGATAAGGACCTCTGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526021.1
ENST00000647218.1
CDS-3UTR CAA 90 bp AGAGGAGGCCGGCCCCTGGGAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTGATTTATTCAGGTTCTaGGGCTTCCGTTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: RGGRPLGAQGLLLCYPPSDLFRF*GFRFLV
Trigger: AACCAGAAAACGGAAGCCCAAGAACCTGAATAAATC...ACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTCCCAGGGGCCGGCCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACCAGGGCCTCCTTCTTaGCTATCCTCCAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQPGPPS*LSSKSQ
Trigger: CTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGG...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGCTTCCCCTAACCAGATaGTCGACTTCAAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LSPEGPRGWAECLPDWLELPLTR*STSSFF
Trigger: GAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTGAGGAAGGAGTCTCCTaGAGCTCCAGCATCAGGGGC +
Preference number: 5 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGEEGVS*SSSIRG
Trigger: GCCCCTGATGCTGGAGCTCAAGGAGACTCCTTCCTC...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS TCA 90 bp AGGTCCGTGCAGGAATTTGAGGAGGGAAGAGGGAAGATTACGCAGTaGTTATGTCCCCGTGACTGTCGGCCAAGACCAGGCTGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: RSVQEFEEGRGKITQ*LCPRDCRPRPGCSK
Trigger: CTTGGAACAGCCTGGTCTTGGCCGACAGTCACGGGGACATAATCACTGCGTAATCTTCCCTCTTCCCTCCTCAAATTCCTGCACGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS GCA 90 bp TGGCTTTATCTACATTTGCCGGGGACAGCAGCAGAGGTCCTTATCTaGGGAGGGCTACAGTTCTCACAGGGATGGCTTCTTCCCCCTATC +
Preference number: 5 (lower is better)
Translates to: WLYLHLPGTAAEVLI*GGLQFSQGWLLPPI
Trigger: GATAGGGGGAAGAAGCCATCCCTGTGAGAACTGTAGCCCTCCGCAGATAAGGACCTCTGCTGCTGTCCCCGGCAAATGTAGATAAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526021.1
ENST00000647218.1
CDS-3UTR CAA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGGATTTATTCAGGTTCTaGGGCTTCCGTTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LSPEGPRGWAECLPDWLEDLFRF*GFRFLV
Trigger: AACCAGAAAACGGAAGCCCAAGAACCTGAATAAATC...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTAGGCCAGGCTCCGTCTaGATGGGACGCATCTCCTCG +
Preference number: 5 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSRPGSV*MGRISS
Trigger: CGAGGAGATGCGTCCCATCAAGACGGAGCCTGGCCT...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTGGCTGGGCTGAGTGCTaGCCAGACTGGCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSGWAEC*PDWLEQ
Trigger: CTGCTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCC...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS CCA 90 bp GTCAAACATATCTACTCATTCTATGGAACGAATTCCTCCAAGATATaGACGCGCCTCTGCGGCCCTGCCGCGAGGGATCCGGACAGACAT +
Preference number: 5 (lower is better)
Translates to: VKHIYSFYGTNSSKI*TRLCGPAARDPDRH
Trigger: ATGTCTGTCCGGATCCCTCGCGGCAGGGCCGCAGAGGCGCGTCCATATCTTGGAGGAATTCGTTCCATAGAATGAGTAGATATGTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS-3UTR CAA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGAAGGGCTCTAGGCTCTaGTTTACTCCGGAAAATCCC +
Preference number: 5 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPKGSRL*FTPENP
Trigger: GGGATTTTCCGGAGTAAACAAGAGCCTAGAGCCCTT...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CAA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTGGTGGTCTGGCAGTaGGCACAGGAGAGGCCCACT +
Preference number: 5 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPVVVWQ*AQERPT
Trigger: AGTGGGCCTCTCCTGTGCCAACTGCCAGACCACCAC...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGCTTCCGTTTTCTGGTTaGGATCCCCTCTTTCCGCAT +
Preference number: 5 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWLPFSG*DPLFPH
Trigger: ATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAAG...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGCTTCCGTTTTCTGGTTaGGATCCCCTCTTTCCGCAT +
Preference number: 5 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPLPFSG*DPLFPH
Trigger: ATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAAG...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGCTTCCGTTTTCTGGTTaGGATCCCCTCTTTCCGCAT +
Preference number: 5 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEELPFSG*DPLFPH
Trigger: ATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAAG...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGGGGAGACGCATAGCCTaGTGGGGAGAGCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEGRRIA*WGELQG
Trigger: GCCCTGAAGCTCTCCCCACAAGGCTATGCGTCTCCC...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATCTTCCCCTAACCAGATaGTCGACTTCAAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: EPRASFFAILQVPGPCRNLPLTR*STSSFF
Trigger: GAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGTCTGTTGTGTTGTGTTaGTTTGCTTCGAATTCGTGT +
Preference number: 5 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSASVVLC*FASNSC
Trigger: ACACGAATTCGAAGCAAACAAACACAACACAACAGA...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CTCTCCCCAGAAGGACCTCGAGGCTGGGCTGAGTGCTTGCCAGACTGGCTTGAGTCTGTTGTGTTGTGTTaGTTTGCTTCGAATTCGTGT +
Preference number: 5 (lower is better)
Translates to: LSPEGPRGWAECLPDWLESVVLC*FASNSC
Trigger: ACACGAATTCGAAGCAAACAAACACAACACAACAGA...CTCAAGCCAGTCTGGCAAGCACTCAGCCCAGCCTCGAGGTCCTTCTGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCATCAAACATATCGAGATaGGGGTGTCGGGCGGCCGGG +
Preference number: 5 (lower is better)
Translates to: KIQHPLPLTRLSTSSFFPSNISR*GCRAAG
Trigger: CCCGGCCGCCCGACACCCCAATCTCGATATGTTTGA...TGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000645330.1
ENST00000647274.1
CDS-3UTR CAA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGACTTCCGTTTTCTGGTTaGGATCCCCTCTTTCCGCAT +
Preference number: 5 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGLPFSG*DPLFPH
Trigger: ATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAAG...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTCCCATCAGCGAGGAATTCTGTTGTGTaGTGTTTGTTTGCTTCGAAT +
Preference number: 5 (lower is better)
Translates to: ERCSVLVLKGGLPPVPSARNSVV*CLFASN
Trigger: ATTCGAAGCAAACAAACACAACACAACAGAATTCCT...CGCTGATGGGACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CTTCCCCTAACCAGATTGTCGACTTCAAGTTTCTTCCCAGTTGTTGTTCTGGAGGAGGAAGGAGTCTCCTaGAGCTCCAGCATCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LPLTRLSTSSFFPVVVLEEEGVS*SSSIRG
Trigger: GCCCCTGATGCTGGAGCTCAAGGAGACTCCTTCCTC...CTCCAGAACAACAACTGGGAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGCCGGAAAATCCCAATTaGAATTTTTGGTGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPPENPN*NFWWFR
Trigger: CCGGAACCACCAAAAATTCAAATTGGGATTTTCCGG...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CAA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTAAGGGCTCTAGGCTCTaGTTTACTCCGGAAAATCCC +
Preference number: 5 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGKGSRL*FTPENP
Trigger: GGGATTTTCCGGAGTAAACAAGAGCCTAGAGCCCTT...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CAA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTCTTCCGTTTTCTGGTTaGGATCCCCTCTTTCCGCAT +
Preference number: 5 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGLPFSG*DPLFPH
Trigger: ATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAAG...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATaGTCGACTTCAAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: GSLQSHQRVKASEKIQHPLPLTR*STSSFF
Trigger: GAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG...CGGGTGTTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGATTTATTCAGGTTCTaGGGCTTCCGTTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: VRFGIRDAGRCHASSGWMDLFRF*GFRFLV
Trigger: AACCAGAAAACGGAAGCCCAAGAACCTGAATAAATC...CATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp TCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATGGATGGGATTTATTCAGGTTCTaGGGCTTCCGTTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: SDLVLGMQGGAMPQADGWDLFRF*GFRFLV
Trigger: AACCAGAAAACGGAAGCCCAAGAACCTGAATAAATC...CCATCCATCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CAACTCACAGGAGAGATGCAGTGTGCTCGTGCTGAAGGGTGGGCTCCCTCCAGTAGGAATTCTGTTGTGTaGTGTTTGTTTGCTTCGAAT +
Preference number: 5 (lower is better)
Translates to: QLTGEMQCARAEGWAPSSRNSVV*CLFASN
Trigger: ATTCGAAGCAAACAAACACAACACAACAGAATTCCT...ACTGGAGGGAGCCCACCCTTCAGCACGAGCACACTGCATCTCTCCTGTGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GAGCCCAGGGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATAGGAATTCTGTTGTGTaGTGTTTGTTTGCTTCGAAT +
Preference number: 5 (lower is better)
Translates to: EPRASFFAILQVPGPCRNRNSVV*CLFASN
Trigger: ATTCGAAGCAAACAAACACAACACAACAGAATTCCT...ATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCCCTGGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAGATTTATTCAGGTTCTaGGGCTTCCGTTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGDLFRF*GFRFLV
Trigger: AACCAGAAAACGGAAGCCCAAGAACCTGAATAAATC...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp AGGGTGGGCTCCCTCCAGTCCCATCAGCGTGTAAAGGCATCTGAGAAAATCCAAGATTTATTCAGGTTCTaGGGCTTCCGTTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: RVGSLQSHQRVKASEKIQDLFRF*GFRFLV
Trigger: AACCAGAAAACGGAAGCCCAAGAACCTGAATAAATC...TTGGATTTTCTCAGATGCCTTTACACGCTGATGGGACTGGAGGGAGCCCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTCTTCCCCTAACCAGATaGTCGACTTCAAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGLPLTR*STSSFF
Trigger: GAAGAAACTTGAAGTCGACAATCTGGTTAGGGGAAG...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GGCCTCCTTCTTTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTGAGGAGTCTGTTGTGTTGTGTTaGTTTGCTTCGAATTCGTGT +
Preference number: 5 (lower is better)
Translates to: GLLLCYPPSPRSVQEFEESVVLC*FASNSC
Trigger: ACACGAATTCGAAGCAAACAAACACAACACAACAGA...CTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAAAGAAGGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GCCCGGCCCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACTCTGTTGTGTTGTGTTaGTTTGCTTCGAATTCGTGT +
Preference number: 5 (lower is better)
Translates to: ARPSACSQILGARNTMQNSVVLC*FASNSC
Trigger: ACACGAATTCGAAGCAAACAAACACAACACAACAGA...GTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGGGCCGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp CCTCCGCTTGTTCTCAGATCCTCGGTGCTAGAAACACAATGCAAAACCCACGGTTCCCAATTTGAATTTTaGGTGGTTCCGGAAGCTGAT +
Preference number: 5 (lower is better)
Translates to: PPLVLRSSVLETQCKTHGSQFEF*VVPEAD
Trigger: ATCAGCTTCCGGAACCACCAAAAATTCAAATTGGGA...ACCGTGGGTTTTGCATTGTGTTTCTAGCACCGAGGATCTGAGAACAAGCGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS-3UTR CAA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGATCTGTTGTGTTGTGTTaGTTTGCTTCGAATTCGTGT +
Preference number: 5 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGSVVLC*FASNSC
Trigger: ACACGAATTCGAAGCAAACAAACACAACACAACAGA...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp TTTGGAGTCAGATTTGGTATTAGGGATGCAGGGCGGTGCCATGCCTCAAGCGGAAGGAATTCTGTTGTGTaGTGTTTGTTTGCTTCGAAT +
Preference number: 5 (lower is better)
Translates to: FGVRFGIRDAGRCHASSGRNSVV*CLFASN
Trigger: ATTCGAAGCAAACAAACACAACACAACAGAATTCCT...TCCGCTTGAGGCATGGCACCGCCCTGCATCCCTAATACCAAATCTGACTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335135.8
ENST00000528712.5
ENST00000532059.6
ENST00000646696.1
ENST00000647274.1
CDS-3UTR CAA 90 bp GCATCTGAGAAAATCCAACACCCGCTTCCCCTAACCAGATTGTCGACTTCAAGTTCCCAATTTGAATTTTaGGTGGTTCCGGAAGCTGAT +
Preference number: 5 (lower is better)
Translates to: ASEKIQHPLPLTRLSTSSSQFEF*VVPEAD
Trigger: ATCAGCTTCCGGAACCACCAAAAATTCAAATTGGGA...ACTTGAAGTCGACAATCTGGTTAGGGGAAGCGGGTGTTGGATTTTCTCAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS GCA 72 bp CGGAGCTGCAGCGGCGACGAAGCCTCTCGCGGCCCCTaGGCCGGCCGCCTCCAAGTCCCCAGCTCGCGGCTC +
Preference number: 6 (lower is better)
Translates to: RSCSGDEASRGP*AGRLQVPSSRL
Trigger: GAGCCGCGAGCTGGGGACTTGGAGGCGGCCGGCGCAGGGGCCGCGAGAGGCTTCGTCGCCGCTGCAGCTCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526716.5
ENST00000642612.1
CDS CCA 72 bp AGGACAGGCCCAGCACGGAGGAGGGCACCCGCGGTGTaGGCACGTAGACTGGCGAGGACGCGGCGCCCGCGC +
Preference number: 6 (lower is better)
Translates to: RTGPARRRAPAV*ARRLARTRRPR
Trigger: GCGCGGGCGCCGCGTCCTCGCCAGTCTACGTGCCCACACCGCGGGTGCCCTCCTCCGTGCTGGGCCTGTCCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000646425.1
ENST00000647274.1
CDS GCA 72 bp CACGAGCCTCCGCGGGCGCAGCGCCGAGAACCAGGGTaGAGAGCAGGATGCGTCCCTGCCGCGGTGGAGGTC +
Preference number: 6 (lower is better)
Translates to: HEPPRAQRREPG*RAGCVPAAVEV
Trigger: GACCTCCACCGCGGCAGGGACGCATCCTGCTCTGCACCCTGGTTCTCGGCGCTGCGCCCGCGGAGGCTCGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526974.1
ENST00000644275.1
CDS CCA 72 bp GGACACCCGCGGCCACAGGCGCAGAAGCTGCTAGGCTaGCTCCTTCCTCCTCGCCGCAGCCGGGGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: GHPRPQAQKLLG*LLPPRRSRGPA
Trigger: AGCAGGACCCCGGCTGCGGCGAGGAGGAAGGAGCCAGCCTAGCAGCTTCTGCGCCTGTGGCCGCGGGTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000647274.1
CDS CCA 72 bp ACGCGCCCACGTCGGCCATGTAAGCCGGGTAGGGGCTaGAGTAGGAGCCCGCGAAGCCGGCGCGCCCGTACT +
Preference number: 6 (lower is better)
Translates to: TRPRRPCKPGRG*SRSPRSRRART
Trigger: AGTACGGGCGCGCCGGCTTCGCGGGCTCCTACTCCAGCCCCTACCCGGCTTACATGGCCGACGTGGGCGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335135.8
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000647274.1
CDS CCA 72 bp GGGCAGAAGACGGAGGGCAGCGTCCAGGCCTGGAGGTaGCGCACGAGCCTTCGGGTCCCCCACTCGTCACAC +
Preference number: 6 (lower is better)
Translates to: GQKTEGSVQAWR*RTSLRVPHSSH
Trigger: GTGTGACGAGTGGGGGACCCGAAGGCTCGTGCGCCACCTCCAGGCCTGGACGCTGCCCTCCGTCTTCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000335135.8
ENST00000526974.1
ENST00000532059.6
ENST00000532977.1
ENST00000622443.3
ENST00000642753.1
ENST00000644275.1
ENST00000646425.1
ENST00000647274.1
CDS CCA 72 bp TCCTGCAACACGGCCCTTGGATTCCCCCGCTGGGCCTaGGCGCCGGTCTGCGATACTCCTTCCCTGCGCGGC +
Preference number: 6 (lower is better)
Translates to: SCNTALGFPRWA*APVCDTPSLRG
Trigger: GCCGCGCAGGGAAGGAGTATCGCAGACCGGCGCCCAGGCCCAGCGGGGGAATCCAAGGGCCGTGTTGCAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS CCA 72 bp GGACACCCGCGGCCACAGGCGCAGAAGCTGCTAGGCTaGCTCCTTCCTCCTCGCCGCAGCCGGGGTCCTCAT +
Preference number: 6 (lower is better)
Translates to: GHPRPQAQKLLG*LLPPRRSRGPH
Trigger: ATGAGGACCCCGGCTGCGGCGAGGAGGAAGGAGCCAGCCTAGCAGCTTCTGCGCCTGTGGCCGCGGGTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526974.1
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
CDS CAA 72 bp CGCGCAGAACGAATGCCGAGTCCTGCAACACGGCCCTaGGATTCCCCCGCTGGGCCTGGGCGCCGGTCTGCG +
Preference number: 6 (lower is better)
Translates to: RAERMPSPATRP*DSPAGPGRRSA
Trigger: CGCAGACCGGCGCCCAGGCCCAGCGGGGGAATCCAAGGGCCGTGTTGCAGGACTCGGCATTCGTTCTGCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS TCA 72 bp GGGGGCGGCCCGTGGTTGGCGGCCATGGCCAAGCTCTaGTACATGGTCCCTGCGAGCTCCCGGCTTCGGTGT +
Preference number: 6 (lower is better)
Translates to: GGGPWLAAMAKL*YMVPASSRLRC
Trigger: ACACCGAAGCCGGGAGCTCGCAGGGACCATGTATCAGAGCTTGGCCATGGCCGCCAACCACGGGCCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526974.1
ENST00000532059.6
ENST00000532977.1
ENST00000622443.3
ENST00000642753.1
ENST00000643249.3
ENST00000644275.1
ENST00000646425.1
ENST00000647274.1
CDS CCA 72 bp TATTGGGGGCAGAAGACGGAGGGCAGCGTCCAGGCCTaGAGGTGGCGCACGAGCCTTCGGGTCCCCCACTCG +
Preference number: 6 (lower is better)
Translates to: YWGQKTEGSVQA*RWRTSLRVPHS
Trigger: CGAGTGGGGGACCCGAAGGCTCGTGCGCCACCTCCAGGCCTGGACGCTGCCCTCCGTCTTCTGCCCCCAATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000335135.8
ENST00000526974.1
ENST00000532059.6
ENST00000532977.1
ENST00000622443.3
ENST00000642753.1
ENST00000644275.1
ENST00000646425.1
ENST00000647274.1
CDS CCA 72 bp GCCGAGTCCTGCAACACGGCCCTTGGATTCCCCCGCTaGGCCTGGGCGCCGGTCTGCGATACTCCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: AESCNTALGFPR*AWAPVCDTPSL
Trigger: CAGGGAAGGAGTATCGCAGACCGGCGCCCAGGCCCAGCGGGGGAATCCAAGGGCCGTGTTGCAGGACTCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS CCA 72 bp GCGCAGAACGAATGCCGAGTCCTGCAACACGGCCCTTaGATTCCCCCGCTGGGCCTGGGCGCCGGTCTGCGA +
Preference number: 6 (lower is better)
Translates to: AQNECRVLQHGP*IPPLGLGAGLR
Trigger: TCGCAGACCGGCGCCCAGGCCCAGCGGGGGAATCCAAGGGCCGTGTTGCAGGACTCGGCATTCGTTCTGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS CCA 72 bp AATTCACCCCAGGGCCTGAAGGTCCGGCGCACCTATTaGGGGCAGAAGACGGAGGGCAGCGTCCAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: NSPQGLKVRRTY*GQKTEGSVQAW
Trigger: CCAGGCCTGGACGCTGCCCTCCGTCTTCTGCCCCCAATAGGTGCGCCGGACCTTCAGGCCCTGGGGTGAATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335135.8
ENST00000526974.1
ENST00000532059.6
ENST00000532977.1
ENST00000622443.3
ENST00000642753.1
ENST00000644275.1
ENST00000646425.1
ENST00000647274.1
CDS CCA 72 bp GACGCATCTCCTCGCTGCTGCTGGTGGTGGCGTTGCTaGAGTTGCTGGAAGCACCGCTGGCGGGAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: DASPRCCWWWRC*SCWKHRWREEG
Trigger: GCCTTCCTCCCGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCACCACCAGCAGCAGCGAGGAGATGCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000526716.5
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000642612.1
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS CCA 72 bp CGGTGGGGAGCGGCGTCCCTGCGGCTGCTCAAGGCCTaGTGTGAGGCAAACTCTGCACAGGGATTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: RWGAASLRLLKA*CEANSAQGFQA
Trigger: AGCCTGGAATCCCTGTGCAGAGTTTGCCTCACACCAGGCCTTGAGCAGCCGCAGGGACGCCGCTCCCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000646696.1
CDS CAA 90 bp AAGGTGACCCGCGCAGAACGAATGCCGAGTCCTGCAACACGGCCCTaGGATTCCCCCGCTGGGCCTGGGCGCCGGTCTGCGATACTCCTT +
Preference number: 6 (lower is better)
Translates to: KVTRAERMPSPATRP*DSPAGPGRRSAILL
Trigger: AAGGAGTATCGCAGACCGGCGCCCAGGCCCAGCGGGGGAATCCAAGGGCCGTGTTGCAGGACTCGGCATTCGTTCTGCGCGGGTCACCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS GCA 72 bp TGGGACGCATCTCCTCGCTGCTGCTGGTGGTGGCGTTaGTGGAGTTGCTGGAAGCACCGCTGGCGGGAGGAA +
Preference number: 6 (lower is better)
Translates to: WDASPRCCWWWR*WSCWKHRWREE
Trigger: TTCCTCCCGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCACCACCAGCAGCAGCGAGGAGATGCGTCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000526716.5
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000642612.1
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS CCA 72 bp GCCCGTGGTTGGCGGCCATGGCCAAGCTCTGATACATaGTCCCTGCGAGCTCCCGGCTTCGGTGTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: ARGWRPWPSSDT*SLRAPGFGVLS
Trigger: AGAGAGGACACCGAAGCCGGGAGCTCGCAGGGACCATGTATCAGAGCTTGGCCATGGCCGCCAACCACGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526974.1
ENST00000532059.6
ENST00000532977.1
ENST00000622443.3
ENST00000642753.1
ENST00000643249.3
ENST00000644275.1
ENST00000646425.1
ENST00000647274.1
CDS TCA 72 bp GGCCCTGCCGCGAGGGATCCGGACAGACATTCAAGGTaGCCCGCGCAGAACGAATGCCGAGTCCTGCAACAC +
Preference number: 6 (lower is better)
Translates to: GPAARDPDRHSR*PAQNECRVLQH
Trigger: GTGTTGCAGGACTCGGCATTCGTTCTGCGCGGGTCACCTTGAATGTCTGTCCGGATCCCTCGCGGCAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS GCA 72 bp GTTGGCGGCCATGGCCAAGCTCTGATACATGGTCCCTaGGAGCTCCCGGCTTCGGTGTCCTCTCTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: VGGHGQALIHGP*ELPASVSSLSL
Trigger: GAGGGAGAGAGAGGACACCGAAGCCGGGAGCTCGCAGGGACCATGTATCAGAGCTTGGCCATGGCCGCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526974.1
ENST00000532059.6
ENST00000532977.1
ENST00000622443.3
ENST00000642753.1
ENST00000643249.3
ENST00000644275.1
ENST00000646425.1
ENST00000647274.1
CDS GCA 72 bp ATTCAAGGTGACCCGCGCAGAACGAATGCCGAGTCCTaGAACACGGCCCTTGGATTCCCCCGCTGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: IQGDPRRTNAES*NTALGFPRWAW
Trigger: CCAGGCCCAGCGGGGGAATCCAAGGGCCGTGTTGCAGGACTCGGCATTCGTTCTGCGCGGGTCACCTTGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS CCA 72 bp TGGTGGTGGCGTTGCTGGAGTTGCTGGAAGCACCGCTaGCGGGAGGAAGGCTCTCACTGCCTGAAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: WWWRCWSCWKHR*REEGSHCLKEL
Trigger: CAGCTCCTTCAGGCAGTGAGAGCCTTCCTCCCGCCAGCGGTGCTTCCAGCAACTCCAGCAACGCCACCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000526716.5
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000642612.1
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS CAA 72 bp GGTCTGTGGAGACTGGCTGACGGGAGACGCATAGCCTaGTGGGGAGAGCTTCAGGGCCGAGAGGACAGGGTG +
Preference number: 6 (lower is better)
Translates to: GLWRLADGRRIA*WGELQGREDRV
Trigger: CACCCTGTCCTCTCGGCCCTGAAGCTCTCCCCACAAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS CAA 90 bp CTTGGAGCTGGTCTGTGGAGACTGGCTGACGGGAGACGCATAGCCTaGTGGGGAGAGCTTCAGGGCCGAGAGGACAGGGTGGATGGAGGG +
Preference number: 6 (lower is better)
Translates to: LGAGLWRLADGRRIA*WGELQGREDRVDGG
Trigger: CCCTCCATCCACCCTGTCCTCTCGGCCCTGAAGCTCTCCCCACAAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGACCAGCTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS TCA 72 bp CGTCTGGGACACGGAGCTGCTGTGCCCGTAGTGAGATaGCAGGCCAGGCTCCGTCTTGATGGGACGCATCTC +
Preference number: 6 (lower is better)
Translates to: RLGHGAAVPVVR*QARLRLDGTHL
Trigger: GAGATGCGTCCCATCAAGACGGAGCCTGGCCTGTCATCTCACTACGGGCACAGCAGCTCCGTGTCCCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS CCA 72 bp TTCAGGGCCGAGAGGACAGGGTGGATGGAGGGCCCATaGCCAGACATCGCACTGACTGAGAACGTCTGGGAC +
Preference number: 6 (lower is better)
Translates to: FRAERTGWMEGP*PDIALTENVWD
Trigger: GTCCCAGACGTTCTCAGTCAGTGCGATGTCTGGCCATGGGCCCTCCATCCACCCTGTCCTCTCGGCCCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS CCA 72 bp CTGTGGAGACTGGCTGACGGGAGACGCATAGCCTTGTaGGGAGAGCTTCAGGGCCGAGAGGACAGGGTGGAT +
Preference number: 6 (lower is better)
Translates to: LWRLADGRRIAL*GELQGREDRVD
Trigger: ATCCACCCTGTCCTCTCGGCCCTGAAGCTCTCCCCACAAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS GCA 72 bp GAATTCCTCCAAGATATGGACGCGCCTCTGCGGCCCTaGCGCGAGGGATCCGGACAGACATTCAAGGTGACC +
Preference number: 6 (lower is better)
Translates to: EFLQDMDAPLRP*REGSGQTFKVT
Trigger: GGTCACCTTGAATGTCTGTCCGGATCCCTCGCGGCAGGGCCGCAGAGGCGCGTCCATATCTTGGAGGAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS CCA 72 bp GGGTCCTCATTCTATGGAACGAATTCCTCCAAGATATaGACGCGCCTCTGCGGCCCTGCCGCGAGGGATCCG +
Preference number: 6 (lower is better)
Translates to: GSSFYGTNSSKI*TRLCGPAARDP
Trigger: CGGATCCCTCGCGGCAGGGCCGCAGAGGCGCGTCCATATCTTGGAGGAATTCGTTCCATAGAATGAGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526974.1
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
CDS GCA 72 bp CGAACAGCCGGCAGCCTGCGAGACAGCCGGGATGGGTaGAAGCTAATGGCTTTATCTACATTTGCCGGGGAC +
Preference number: 6 (lower is better)
Translates to: RTAGSLRDSRDG*KLMALSTFAGD
Trigger: GTCCCCGGCAAATGTAGATAAAGCCATTAGCTTGCACCCATCCCGGCTGTCTCGCAGGCTGCCGGCTGTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526021.1
ENST00000647218.1
CDS CCA 72 bp CAGGCTGTTCCAAGAGTCCTGCTTGGAGCTGGTCTGTaGAGACTGGCTGACGGGAGACGCATAGCCTTGTGG +
Preference number: 6 (lower is better)
Translates to: QAVPRVLLGAGL*RLADGRRIALW
Trigger: CCACAAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGACCAGCTCCAAGCAGGACTCTTGGAACAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS TCA 72 bp AAGAGTCCTGCTTGGAGCTGGTCTGTGGAGACTGGCTaGCGGGAGACGCATAGCCTTGTGGGGAGAGCTTCA +
Preference number: 6 (lower is better)
Translates to: KSPAWSWSVETG*RETHSLVGRAS
Trigger: TGAAGCTCTCCCCACAAGGCTATGCGTCTCCCGTCAGCCAGTCTCCACAGACCAGCTCCAAGCAGGACTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS GCA 72 bp TATGGAACGAATTCCTCCAAGATATGGACGCGCCTCTaGGGCCCTGCCGCGAGGGATCCGGACAGACATTCA +
Preference number: 6 (lower is better)
Translates to: YGTNSSKIWTRL*GPAARDPDRHS
Trigger: TGAATGTCTGTCCGGATCCCTCGCGGCAGGGCCGCAGAGGCGCGTCCATATCTTGGAGGAATTCGTTCCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000526974.1
ENST00000528712.5
ENST00000532977.1
ENST00000642753.1
ENST00000644275.1
ENST00000646696.1
CDS CAA 90 bp CCCGTCCCATCTCGCCTCCAGAGCGGGGTGGACATAGCCCCACAGTaGACACACTCTCTGCCTTCTGAGAAGTCGTCAAACATATCGAGA +
Preference number: 6 (lower is better)
Translates to: PVPSRLQSGVDIAPQ*THSLPSEKSSNISR
Trigger: TCTCGATATGTTTGACGACTTCTCAGAAGGCAGAGAGTGTGTCAACTGTGGGGCTATGTCCACCCCGCTCTGGAGGCGAGATGGGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335135.8
ENST00000622443.3
ENST00000645330.1
ENST00000647274.1
CDS CAA 90 bp CCCGTCCCATCTCGCCTCCAGAGCGGGGTGGACATAGCCCCACAGTaGACACACTCTCTGCCTTCTGAGAAGTCGTCAAACATATCTACG +
Preference number: 6 (lower is better)
Translates to: PVPSRLQSGVDIAPQ*THSLPSEKSSNIST
Trigger: CGTAGATATGTTTGACGACTTCTCAGAAGGCAGAGAGTGTGTCAACTGTGGGGCTATGTCCACCCCGCTCTGGAGGCGAGATGGGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532059.6
ENST00000643249.3
CDS CCA 72 bp ATCTACTCATTCTATGGAACGAATTCCTCCAAGATATaGACGCGCCTCTGCGGCCCTGCCGCGAGGGATCCG +
Preference number: 6 (lower is better)
Translates to: IYSFYGTNSSKI*TRLCGPAARDP
Trigger: CGGATCCCTCGCGGCAGGGCCGCAGAGGCGCGTCCATATCTTGGAGGAATTCGTTCCATAGAATGAGTAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528712.5
ENST00000646696.1
CDS CCA 72 bp CAAACGAACAGCCGGCAGCCTGCGAGACAGCCGGGATaGGTGCAAGCTAATGGCTTTATCTACATTTGCCGG +
Preference number: 6 (lower is better)
Translates to: QTNSRQPARQPG*VQANGFIYICR
Trigger: CCGGCAAATGTAGATAAAGCCATTAGCTTGCACCCATCCCGGCTGTCTCGCAGGCTGCCGGCTGTTCGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526021.1
ENST00000647218.1
CDS CAA 90 bp CCCGTCCCATCTCGCCTCCAGAGCGGGGTGGACATAGCCCCACAGTaGACACACTCTCTGCCTTCTGAGAAGTCGTCAAACATATCTACT +
Preference number: 6 (lower is better)
Translates to: PVPSRLQSGVDIAPQ*THSLPSEKSSNIST
Trigger: AGTAGATATGTTTGACGACTTCTCAGAAGGCAGAGAGTGTGTCAACTGTGGGGCTATGTCCACCCCGCTCTGGAGGCGAGATGGGACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526716.5
ENST00000528712.5
ENST00000642612.1
ENST00000646696.1
CDS TCA 72 bp GGGAAGAGGGAAGATTACGCAGTGATTATGTCCCCGTaGCTGTCGGCCAAGACCAGGCTGTTCCAAGAGTCC +
Preference number: 6 (lower is better)
Translates to: GKREDYAVIMSP*LSAKTRLFQES
Trigger: GGACTCTTGGAACAGCCTGGTCTTGGCCGACAGTCACGGGGACATAATCACTGCGTAATCTTCCCTCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS GCA 72 bp CTACATTTGCCGGGGACAGCAGCAGAGGTCCTTATCTaGGGAGGGCTACAGTTCTCACAGGGATGGCTTCTT +
Preference number: 6 (lower is better)
Translates to: LHLPGTAAEVLI*GGLQFSQGWLL
Trigger: AAGAAGCCATCCCTGTGAGAACTGTAGCCCTCCGCAGATAAGGACCTCTGCTGCTGTCCCCGGCAAATGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526021.1
ENST00000647218.1
CDS GCA 72 bp CCGGGATGGGTGCAAGCTAATGGCTTTATCTACATTTaGCGGGGACAGCAGCAGAGGTCCTTATCTGCGGAG +
Preference number: 6 (lower is better)
Translates to: PGWVQANGFIYI*RGQQQRSLSAE
Trigger: CTCCGCAGATAAGGACCTCTGCTGCTGTCCCCGGCAAATGTAGATAAAGCCATTAGCTTGCACCCATCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526021.1
ENST00000647218.1
CDS TCA 72 bp CAGGAATTTGAGGAGGGAAGAGGGAAGATTACGCAGTaGTTATGTCCCCGTGACTGTCGGCCAAGACCAGGC +
Preference number: 6 (lower is better)
Translates to: QEFEEGRGKITQ*LCPRDCRPRPG
Trigger: GCCTGGTCTTGGCCGACAGTCACGGGGACATAATCACTGCGTAATCTTCCCTCTTCCCTCCTCAAATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS CCA 72 bp GATTTATTCAGGTTCTTGGGCTTCCGTTTTCTGGTTTaGATCCCCTCTTTCCGCATTGCAAGAGGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: DLFRFLGFRFLV*IPSFRIARGLG
Trigger: CCCCAGGCCTCTTGCAATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAAGCCCAAGAACCTGAATAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526716.5
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000642612.1
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS TCA 72 bp TTGCTATCCTCCAAGTCCCAGGTCCGTGCAGGAATTTaGGGAGGGAAGAGGGAAGATTACGCAGTGATTATG +
Preference number: 6 (lower is better)
Translates to: LLSSKSQVRAGI*GGKREDYAVIM
Trigger: CATAATCACTGCGTAATCTTCCCTCTTCCCTCCTCAAATTCCTGCACGGACCTGGGACTTGGAGGATAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335135.8
ENST00000526021.1
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000645330.1
ENST00000646696.1
ENST00000647218.1
ENST00000647274.1
CDS CAA 72 bp AGATTTATTCAGGTTCTTGGGCTTCCGTTTTCTGGTTaGGATCCCCTCTTTCCGCATTGCAAGAGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: RFIQVLGLPFSG*DPLFPHCKRPG
Trigger: CCCAGGCCTCTTGCAATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAAGCCCAAGAACCTGAATAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526716.5
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000642612.1
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS CAA 72 bp GAAGGAGCTGCTGGTGTCTTAGATTTATTCAGGTTCTaGGGCTTCCGTTTTCTGGTTTGGATCCCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: EGAAGVLDLFRF*GFRFLVWIPSF
Trigger: GAAAGAGGGGATCCAAACCAGAAAACGGAAGCCCAAGAACCTGAATAAATCTAAGACACCAGCAGCTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000335135.8
ENST00000526716.5
ENST00000528712.5
ENST00000532059.6
ENST00000622443.3
ENST00000642612.1
ENST00000643249.3
ENST00000645330.1
ENST00000646696.1
ENST00000647274.1
CDS CAA 72 bp AGGGATGGCTTCTTCCCCCTATCTCATCTCAAACCCTaGAGGCCACGTGTGTTTCAGGCTTCAAAACTTTTT +
Preference number: 6 (lower is better)
Translates to: RDGFFPLSHLKP*RPRVFQASKLF
Trigger: AAAAAGTTTTGAAGCCTGAAACACACGTGGCCTCAAGGGTTTGAGATGAGATAGGGGGAAGAAGCCATCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526021.1
ENST00000647218.1
CDS CAA 72 bp GCTCTTGTTTACTCCGGAAAATCCCAATTTGAATTTTaGGTGGTTCCGGAAGCTGATGTAGGAGCAGCTGAA +
Preference number: 6 (lower is better)
Translates to: ALVYSGKSQFEF*VVPEADVGAAE
Trigger: TTCAGCTGCTCCTACATCAGCTTCCGGAACCACCAAAAATTCAAATTGGGATTTTCCGGAGTAAACAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335135.8
ENST00000526974.1
ENST00000532059.6
ENST00000532977.1
ENST00000622443.3
ENST00000642753.1
ENST00000644275.1
ENST00000646425.1
ENST00000647274.1