Pregenerated sensors for GAST (Homo sapiens)

Ensembl gene IDs: ENSG00000184502

Ensembl transcript IDs: ENST00000329402.4

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TCCAGGTCCCTGTTGGCCCCTGTACCTAAGGGTGCATCTGGCTGCTaGGAGCGGGGCTTCCAAGAAGCTTCAGAGAAGGCGGCCAGAGCC	+
Preference number: 5 (lower is better) Translates to: SRSLLAPVPKGASGC*ERGFQEASEKAARA Trigger: GGCTCTGGCCGCCTTCTCTGAAGCTTCTTGGAAGCCCCGCTCCCAGCAGCCAGATGCACCCTTAGGTACAGGGGCCAACAGGGACCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329402.4
CDS GCA 90 bp	AGCTCCAGGTCCCTGTTGGCCCCTGTACCTAAGGGTGCATCTGGCTaGTGGGAGCGGGGCTTCCAAGAAGCTTCAGAGAAGGCGGCCAGA	+
Preference number: 5 (lower is better) Translates to: SSRSLLAPVPKGASG*WERGFQEASEKAAR Trigger: TCTGGCCGCCTTCTCTGAAGCTTCTTGGAAGCCCCGCTCCCAGCAGCCAGATGCACCCTTAGGTACAGGGGCCAACAGGGACCTGGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329402.4
CDS GCA 90 bp	GCTCTGAAGCTTGGTTCTAGGATTGTTAGTTCTCATCCTCAGCACTaGGGCGGCCGAAGTCCATCCATCCATAGGCTTCTTCTTCTTCCT	+
Preference number: 5 (lower is better) Translates to: ALKLGSRIVSSHPQH*GGRSPSIHRLLLLP Trigger: AGGAAGAAGAAGAAGCCTATGGATGGATGGACTTCGGCCGCCGCAGTGCTGAGGATGAGAACTAACAATCCTAGAACCAAGCTTCAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329402.4
CDS CCA 72 bp	CCTGCTGCTCCAGCCAGGGTAGCTCCAGGTCCCTGTTaGCCCCTGTACCTAAGGGTGCATCTGGCTGCTGGG	+
Preference number: 6 (lower is better) Translates to: PAAPARVAPGPC*PLYLRVHLAAG Trigger: CCCAGCAGCCAGATGCACCCTTAGGTACAGGGGCCAACAGGGACCTGGAGCTACCCTGGCTGGAGCAGCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329402.4
CDS CCA 72 bp	CTGTTGGCCCCTGTACCTAAGGGTGCATCTGGCTGCTaGGAGCGGGGCTTCCAAGAAGCTTCAGAGAAGGCG	+
Preference number: 6 (lower is better) Translates to: LLAPVPKGASGC*ERGFQEASEKA Trigger: CGCCTTCTCTGAAGCTTCTTGGAAGCCCCGCTCCCAGCAGCCAGATGCACCCTTAGGTACAGGGGCCAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329402.4
CDS GCA 72 bp	TCCCTGTTGGCCCCTGTACCTAAGGGTGCATCTGGCTaGTGGGAGCGGGGCTTCCAAGAAGCTTCAGAGAAG	+
Preference number: 6 (lower is better) Translates to: SLLAPVPKGASG*WERGFQEASEK Trigger: CTTCTCTGAAGCTTCTTGGAAGCCCCGCTCCCAGCAGCCAGATGCACCCTTAGGTACAGGGGCCAACAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329402.4
CDS GCA 72 bp	CTTGGTTCTAGGATTGTTAGTTCTCATCCTCAGCACTaGGGCGGCCGAAGTCCATCCATCCATAGGCTTCTT	+
Preference number: 6 (lower is better) Translates to: LGSRIVSSHPQH*GGRSPSIHRLL Trigger: AAGAAGCCTATGGATGGATGGACTTCGGCCGCCGCAGTGCTGAGGATGAGAACTAACAATCCTAGAACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329402.4

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